Psyllid ID: psy2521
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 783 | 2.2.26 [Sep-21-2011] | |||||||
| Q9QUR6 | 710 | Prolyl endopeptidase OS=M | yes | N/A | 0.860 | 0.949 | 0.457 | 0.0 | |
| O70196 | 710 | Prolyl endopeptidase OS=R | yes | N/A | 0.860 | 0.949 | 0.458 | 0.0 | |
| P48147 | 710 | Prolyl endopeptidase OS=H | yes | N/A | 0.860 | 0.949 | 0.455 | 0.0 | |
| P23687 | 710 | Prolyl endopeptidase OS=S | yes | N/A | 0.860 | 0.949 | 0.448 | 0.0 | |
| Q9XTA2 | 710 | Prolyl endopeptidase OS=B | yes | N/A | 0.860 | 0.949 | 0.445 | 0.0 | |
| Q06903 | 690 | Prolyl endopeptidase OS=A | no | N/A | 0.819 | 0.930 | 0.378 | 1e-124 | |
| P27028 | 705 | Prolyl endopeptidase OS=F | N/A | N/A | 0.828 | 0.920 | 0.358 | 1e-120 | |
| P27195 | 705 | Prolyl endopeptidase OS=E | N/A | N/A | 0.828 | 0.920 | 0.360 | 1e-118 | |
| Q86AS5 | 760 | Prolyl endopeptidase OS=D | yes | N/A | 0.856 | 0.882 | 0.314 | 1e-100 | |
| P55577 | 726 | Uncharacterized peptidase | yes | N/A | 0.394 | 0.425 | 0.346 | 6e-49 |
| >sp|Q9QUR6|PPCE_MOUSE Prolyl endopeptidase OS=Mus musculus GN=Prep PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/722 (45%), Positives = 456/722 (63%), Gaps = 48/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP V +DET +YHG KI DPY WLE P +T+ F QN I+ P+ +
Sbjct: 6 YPDVYRDETSVQEYHGHKICDPYSWLEDPDSEQTKAFVEAQNKITVPFLEQ--------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P G+ KE++ + +Y KYS ++ YFYF+N
Sbjct: 57 ------------CPIRGL-------------YKERMTELYDYPKYSCHFKKGKRYFYFYN 91
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 92 TGLQNQRVLYVQDSLEGEARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWV 151
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+
Sbjct: 152 TIKFMKVDGAKELPDVLERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLC 211
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YHVLGT+Q +DI EFP+ +E++D GRY+L+S +G D L Y DL
Sbjct: 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI---WEGCDPVNRLWYCDLQQ 268
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
P+G I+G +I + ++ + N G KT +N+P +++ I+ +P E WK
Sbjct: 269 EPNG-ITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWK 327
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
L+PE E L+ VA V +N L++ Y+ +V++++ LHDL TG L +FPLD+G + SG
Sbjct: 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSVVGYSG 387
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
R+K +E+FY FTSFL PG IYHC++ +++ +P +FRE V + +QT Q+++
Sbjct: 388 RKKDSEIFYQFTSFLSPGVIYHCDLT-----KEELEPMVFREVTVKGIDAADYQTIQIFY 442
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F+RH G+ A+
Sbjct: 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVA 502
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV A
Sbjct: 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAA 562
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+KFTI + +++G + K HF LL YSPLHN+K+
Sbjct: 563 CANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYGCSDTKQHFEWLLKYSPLHNVKL 622
Query: 712 P-PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG
Sbjct: 623 PEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGA 682
Query: 771 GK 772
GK
Sbjct: 683 GK 684
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Mus musculus (taxid: 10090) EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 2EC: 6 |
| >sp|O70196|PPCE_RAT Prolyl endopeptidase OS=Rattus norvegicus GN=Prep PE=1 SV=1 | Back alignment and function description |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/722 (45%), Positives = 457/722 (63%), Gaps = 48/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP V +DET DYHG KI DPY WLE P +T+ F QN I+ P+ +
Sbjct: 6 YPDVYRDETSVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQ--------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P G+ KE++ + +Y KYS ++ YFYF+N
Sbjct: 57 ------------CPIRGL-------------YKERMTELYDYPKYSCHFKKGKRYFYFYN 91
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 92 TGLQNQRVLYVQDSLEGEARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWV 151
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+
Sbjct: 152 TIKFMKVDGAKELPDVLERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLC 211
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YHVLGT+Q +D+ EFP+ +E++D GRY+L+S +G D L Y DL
Sbjct: 212 YHVLGTDQSEDVLCAEFPDEPKWMGGAELSDDGRYVLLSI---WEGCDPVNRLWYCDLQQ 268
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
+G I+G +I + ++ I N G KT +N+P +++ I+ +P E WK
Sbjct: 269 GSNG-INGILKWVKLIDNFEGEYDYITNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWK 327
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
L+PE E L+ VA V +N L++ Y++NV++++ LHDL TG L +FPLD+G + SG
Sbjct: 328 VLVPEHEKDVLEWVACVRSNFLVLCYLRNVKNILQLHDLTTGALLKTFPLDVGSVVGYSG 387
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
R+K +E+FY FTSFL PG IYHC++ +++ +P +FRE V + + +QT QV++
Sbjct: 388 RKKDSEIFYQFTSFLSPGVIYHCDLT-----REELEPRVFREVTVKGIDASDYQTIQVFY 442
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F+RH G+ A+
Sbjct: 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVA 502
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT K +TI GGSNGGLLV A
Sbjct: 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAA 562
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+KFTI + +++G ++K HF LL YSPLHN+K+
Sbjct: 563 CANQRPDLFGCVIAQVGVMDMLKFHKFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKL 622
Query: 712 P-PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG
Sbjct: 623 PEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGP 682
Query: 771 GK 772
GK
Sbjct: 683 GK 684
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has high activity on the succinyl- (suc-) peptide-4-methylcoumaryl-7-amide (MCA) substrates suc-Gly-Pro-Leu-Gly-Pro-MCA, suc-Gly-Pro-MCA and suc-Ala-Ala-Ala-MCA. Rattus norvegicus (taxid: 10116) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P48147|PPCE_HUMAN Prolyl endopeptidase OS=Homo sapiens GN=PREP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/722 (45%), Positives = 455/722 (63%), Gaps = 48/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP V +DET DYHG KI DPY WLE P +T+ F QN I+ P+ +
Sbjct: 6 YPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQ--------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P G+ KE++ + +Y KYS ++ YFYF+N
Sbjct: 57 ------------CPIRGL-------------YKERMTELYDYPKYSCHFKKGKRYFYFYN 91
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 92 TGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWV 151
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+Y
Sbjct: 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLY 211
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YHVLGT+Q +DI EFP+ +E++D GRY+L+S +G D L Y DL
Sbjct: 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR---EGCDPVNRLWYCDLQQ 268
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
G I+G +I + ++ + N G KT + +P +V+ I+ +P E WK
Sbjct: 269 ESSG-IAGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRQSPNYRVINIDFRDPEESKWK 327
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
L+PE E L+ +A V +N L++ Y+ +V++++ LHDL TG L +FPLD+G I SG
Sbjct: 328 VLVPEHEKDVLEWIACVRSNFLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSIVGYSG 387
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
++K E+FY FTSFL PG IYHC++ +++ +P +FRE V + + +QT Q+++
Sbjct: 388 QKKDTEIFYQFTSFLSPGIIYHCDLT-----KEELEPRVFREVTVKGIDASDYQTVQIFY 442
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F+RH GI A+
Sbjct: 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGILAVA 502
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV A
Sbjct: 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAA 562
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+K+TI + +++G ++K HF L+ YSPLHN+K+
Sbjct: 563 CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLVKYSPLHNVKL 622
Query: 712 P-PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG
Sbjct: 623 PEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGA 682
Query: 771 GK 772
GK
Sbjct: 683 GK 684
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P23687|PPCE_PIG Prolyl endopeptidase OS=Sus scrofa GN=PREP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/722 (44%), Positives = 454/722 (62%), Gaps = 48/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP V +DET DYHG K+ DPY WLE P +T+ F QN I+ P+ +
Sbjct: 6 YPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQ--------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P G+ KE++ + +Y KYS ++ YFYF+N
Sbjct: 57 ------------CPIRGL-------------YKERMTELYDYPKYSCHFKKGKRYFYFYN 91
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 92 TGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWV 151
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+Y
Sbjct: 152 TIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLY 211
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YHVLGT+Q +DI EFP+ +E++D GRY+L+S +G D L Y DL
Sbjct: 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR---EGCDPVNRLWYCDLQQ 268
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
+G I+G +I + ++ + N G KT +++P +++ I+ +P E WK
Sbjct: 269 ESNG-ITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK 327
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
L+PE E L+ VA V +N L++ Y+ +V++ + LHDL TG L FPL++G + SG
Sbjct: 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG 387
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
++K E+FY FTSFL PG IYHC++ +++ +P +FRE V + + +QT Q+++
Sbjct: 388 QKKDTEIFYQFTSFLSPGIIYHCDLT-----KEELEPRVFREVTVKGIDASDYQTVQIFY 442
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F+RH G+ A+
Sbjct: 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVA 502
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV
Sbjct: 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAT 562
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+K+TI + +++G ++K HF L+ YSPLHN+K+
Sbjct: 563 CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKL 622
Query: 712 P-PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG
Sbjct: 623 PEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGA 682
Query: 771 GK 772
GK
Sbjct: 683 GK 684
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Sus scrofa (taxid: 9823) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q9XTA2|PPCE_BOVIN Prolyl endopeptidase OS=Bos taurus GN=PREP PE=2 SV=1 | Back alignment and function description |
|---|
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/722 (44%), Positives = 452/722 (62%), Gaps = 48/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP V +DET DYHG KI DPY WLE P +T+ F QN I+ P+ +
Sbjct: 6 YPDVYRDETAVQDYHGHKICDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQ--------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P G+ KE++ + +Y KYS ++ YFYF+N
Sbjct: 57 ------------CPIRGL-------------YKERMTELYDYPKYSCNFKKGKRYFYFYN 91
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN +LYVQ +L G V LDPN LS DGT AL+ YAFS++G++ AY LS SGSDW
Sbjct: 92 TGLQNQRVLYVQDSLEGEARVCLDPNTLSDDGTVALRGYAFSEDGEYVAYGLSASGSDWV 151
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ VD K+ +VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+
Sbjct: 152 TIKFMKVDGAKELADVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLC 211
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YHVLGT+Q +DI EFP+ +E++D GRY+L+S +G D L Y DLH
Sbjct: 212 YHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR---EGCDPVNRLWYCDLHQ 268
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
P+G I+G +I + ++ + N G KT +++P +++ I+ +P E WK
Sbjct: 269 EPNG-ITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESRWK 327
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
L+PE E L+ VA V +N L++ Y+ +V++ + LHD+ TG L +FPL++G + SG
Sbjct: 328 VLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDMATGALLKTFPLEVGSVVGYSG 387
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
++K E+FY FTSFL PG IYHC++ +++ +P +FRE V + + +QT Q+++
Sbjct: 388 QKKDTEIFYQFTSFLSPGIIYHCDLT-----KEELEPRVFREVTVKGIDASDYQTVQIFY 442
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+ R +F+RH G+ A+
Sbjct: 443 PSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVCRLIFVRHMGGVLAVA 502
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV
Sbjct: 503 NIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAT 562
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+K+TI + +++G +NK HF L+ YSPLHN+K+
Sbjct: 563 CANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDNKQHFEWLIKYSPLHNVKL 622
Query: 712 P-PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG
Sbjct: 623 PEADDIQYPSMLLLTADHDDRVVPLHSPKFIATLQHLVGRSRKQNNPLLIHVDTKAGHGA 682
Query: 771 GK 772
GK
Sbjct: 683 GK 684
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q06903|PPCE_AERHY Prolyl endopeptidase OS=Aeromonas hydrophila PE=1 SV=2 | Back alignment and function description |
|---|
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 275/726 (37%), Positives = 398/726 (54%), Gaps = 84/726 (11%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP R+ E + D Y G + DPYRWLE ET+ + QN ++ Y
Sbjct: 9 YPVTRQSEQL-DHYFGQAVADPYRWLEDDRSPETEAWVKAQNRVTQDYL----------- 56
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P+ R+AIK +L NY K AP R+ +++F N
Sbjct: 57 -----------------AQIPF------RDAIKGKLATSWNYAKEGAPFREGRYHYFFKN 93
Query: 176 KGLQNHSILYVQRNLTGS-TEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDW 234
GLQN ++L Q L G EVFLDPN LS DGTTAL +FS +GK AY LS +GSDW
Sbjct: 94 DGLQNQNVLCGQ--LAGKPAEVFLDPNLLSPDGTTALDQLSFSRDGKTLAYSLSLAGSDW 151
Query: 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ-K 293
+H+ DV++ + L++VKF ISW ++GFFY+ Y DG+E +A Q K
Sbjct: 152 REIHLMDVESKQPLETPLRDVKFSGISWL-GNEGFFYSSY----DKPDGSELSARTDQHK 206
Query: 294 IYYHVLGTEQDKDIPVV-EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352
+Y+H LGT Q++D V P R + + VT+ RYLL+S +++T G+ L+ DL
Sbjct: 207 LYFHRLGTAQEEDRLVFGAIPAQRHRYVGATVTEDDRYLLISAADSTSGNRLYVKDLTR- 265
Query: 353 PDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT 412
+G PL TV + ++ N G L + T ++AP ++VT+ +NP + W+
Sbjct: 266 -EGA-----PLLTVQGDLAADVSLVDNKGSRLYLLTNRDAPNRRLVTVEADNPGPEQWRD 319
Query: 413 LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITHISG 471
LIPE R + L Y+ + + ++ D + GKR+ L LG ++ +G
Sbjct: 320 LIPE---RQQVLTVHSGGGYLFAEYMVDATARVEQFD-HDGKRVREVGLPGLGSVSGFNG 375
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKP-----TIFRETIVPEFEPTLFQT 526
++ +++GF ++ QP T+Y F+P +++R + P F+P + +
Sbjct: 376 KQDDPALYFGFENYAQPPTLYK------------FEPNSGAISLYRASAAP-FKPEDYVS 422
Query: 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG 586
+Q ++RSKDGTRVP+ I +R G + NP I+YGYGG+ VS+ P+FS+S +L G
Sbjct: 423 EQRFYRSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWL-DLGG 481
Query: 587 IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG 646
+YA+ N+RGGGE G+ WH AG + KQN FDDF AAAEY+ + YT+ + I GGSNGG
Sbjct: 482 VYAVANLRGGGEYGQAWHLAGTRMNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGG 541
Query: 647 LLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFG-SPNNKTHFHNLLSYSP 705
LLVGA + QRP+L A VG LDMLR++ FT ++G S +++ F L YSP
Sbjct: 542 LLVGAVMTQRPDLMRVACQAVGVLDMLRYHTFTAGAGWAYDYGTSADSEAMFDYLKGYSP 601
Query: 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765
LH+++ YP+TLV T DHDDRV P HS+KF ATLQ +P L+R+E +
Sbjct: 602 LHSVRA---GVSYPSTLVTTADHDDRVVPAHSFKFAATLQADDAG----PHPQLIRIETN 654
Query: 766 AGHGQG 771
AGHG G
Sbjct: 655 AGHGAG 660
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Aeromonas hydrophila (taxid: 644) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P27028|PPCE_FLAME Prolyl endopeptidase OS=Flavobacterium meningosepticum GN=f1pep1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 260/726 (35%), Positives = 405/726 (55%), Gaps = 77/726 (10%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP+ +K + D Y G ++ DPYRWLE +T+ + +Q + + Q++ + ++
Sbjct: 28 YPETKK-VSHTDTYFGTQVSDPYRWLEDDRAEDTKAW--VQQEVK--FTQDYLAQIPFRD 82
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
QL K+QL+ + NYEK SAP ++ ++ N
Sbjct: 83 QL------------------------------KKQLMDIWNYEKISAPFKKGKYTYFSKN 112
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQ S+LY +++ G TEVFLDPNK S+ GTT+L +F+ G AY +S+ GSDWN
Sbjct: 113 DGLQAQSVLY-RKDAAGKTEVFLDPNKFSEKGTTSLASVSFNKKGTLVAYSISEGGSDWN 171
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCD-INGTADGTETTAHMGQKI 294
+ I D +T K E L +VKF ISW D GFFY+ Y G+ T H K+
Sbjct: 172 KIIILDAETKKQLDETLLDVKFSGISWLGDE-GFFYSSYDKPKEGSVLSGMTDKH---KV 227
Query: 295 YYHVLGTEQDKDIPVV---EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351
Y+H LGT+Q +D ++ +FP R +G + VTD RYL+VS +N T G++L+ DL +
Sbjct: 228 YFHKLGTKQSQDELIIGGDKFPR-RYIGAY--VTDDQRYLVVSAANATNGNELYIKDLKN 284
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
D +I G D + + +G L + T K+AP ++V + NP + WK
Sbjct: 285 KTD--------FIPIITGFDSNVNVADTDGDTLYLFTDKDAPNKRLVKTTIQNPKAETWK 336
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITHIS 470
+I E + L++ Y+++ + +D N GK + + L G +
Sbjct: 337 DVIAE-TSEPLEI--NTGGGYFFATYMKDAIDQVKQYDKN-GKLVRAIKLPGSGNASGFG 392
Query: 471 GRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVY 530
G + +++Y FT+++ P TI+ N+ ++ ++++ V +F P + ++QV+
Sbjct: 393 GEKTEKDLYYSFTNYITPPTIFKYNVTTGNSE-------VYQKPKV-KFNPENYVSEQVF 444
Query: 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAI 590
+ S DGT++PM I ++ G ++ +NP I+Y YGG+ +S+ P FS+ +++ + GIYA+
Sbjct: 445 YTSSDGTKIPMMISYKKGLKKDGKNPTILYSYGGFNISLQPAFSVVNAIWMEN-GGIYAV 503
Query: 591 PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 650
PNIRGGGE G+ WH+AG ++K+N F+DF AA EY+ YT +Y+ + G SNGGLLVG
Sbjct: 504 PNIRGGGEYGKKWHDAGTKMQKKNVFNDFIAAGEYLQKNGYTSKEYMALSGRSNGGLLVG 563
Query: 651 ACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP-NNKTHFHNLLSYSPLHNI 709
A + RP+L A VG LDMLR+NKFT ++G+ ++K F L SYSP+HN+
Sbjct: 564 ATMTMRPDLAKVAFPGVGVLDMLRYNKFTAGAGWAYDYGTAEDSKEMFEYLKSYSPVHNV 623
Query: 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
K T YP+T+V+T DHDDRV P HS+KF + LQ K KNP+L+R+E +AGHG
Sbjct: 624 KA---GTCYPSTMVITSDHDDRVVPAHSFKFGSELQAKQSC----KNPILIRIETNAGHG 676
Query: 770 QGKALD 775
G++ +
Sbjct: 677 AGRSTE 682
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Flavobacterium meningosepticum (taxid: 238) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P27195|PPCF_ELIMR Prolyl endopeptidase OS=Elizabethkingia miricola PE=1 SV=1 | Back alignment and function description |
|---|
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/726 (36%), Positives = 393/726 (54%), Gaps = 77/726 (10%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP+ +K D Y G ++ DPYRWLE +T+ + + + Y
Sbjct: 28 YPETKKVNHT-DTYFGNQVSDPYRWLEDDRAEDTKAWVQQEVKFTQDYL----------- 75
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
P+ R IK+QLL + NYEK SAP ++ +++ N
Sbjct: 76 -----------------AQIPF------RGQIKKQLLDIWNYEKISAPFKKGKYTYFYKN 112
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQ S+LY +++ +G TEVFLDPNK S GTT+L +F+ G AY +S+ GSDWN
Sbjct: 113 DGLQAQSVLY-RKDASGKTEVFLDPNKFSDKGTTSLANLSFNKKGTLVAYSISEGGSDWN 171
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ-KI 294
+ I D +T K E L +VKF ISW D GFFY+ Y + DG+ + + K+
Sbjct: 172 KIIILDAETKKQIDETLLDVKFSGISWLGDE-GFFYSSY---DKPKDGSVLSGMTDKHKV 227
Query: 295 YYHVLGTEQDKDIPVV---EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351
Y+H LGT+Q +D ++ +FP L VT+ RYL+VS +N T G++L+ DL +
Sbjct: 228 YFHKLGTKQSQDELIIGGDKFPRRY---LSGYVTEDQRYLVVSAANATNGNELYIKDLKN 284
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
D +I G + + ++ +G L + T KNAP ++V + NP + WK
Sbjct: 285 KTD--------FIPIITGFESNVGLVDTDGDTLFLHTDKNAPNMRMVKTTIQNPKPETWK 336
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
+I E + Y+++ S + +D TGK + L G
Sbjct: 337 DVIAETSE---PMRVNSGGGYFFATYMKDALSQIKQYD-KTGKLVREIKLPGSGTAGGFG 392
Query: 472 RRKY-NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVY 530
K E++Y FT+++ P TI+ +I D K ++++ V +F P + ++QV+
Sbjct: 393 GEKTEKELYYSFTNYITPPTIFKFSI-------DSGKSEVYQKPKV-KFNPENYVSEQVF 444
Query: 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAI 590
+ S DGT++PM I ++ G ++ +NP I+Y YGG+ +S+ P FS+ +++ + GIYA+
Sbjct: 445 YTSADGTKIPMMISNKKGLKKDGKNPTILYSYGGFNISLQPAFSVVNAIWMEN-GGIYAV 503
Query: 591 PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 650
PNIRGGGE G+ WH+AG +K+N F+DF AA EY+ YT Y+ + G SNGGLLVG
Sbjct: 504 PNIRGGGEYGKKWHDAGTKQQKKNVFNDFIAAGEYLQKNGYTSKDYMALSGRSNGGLLVG 563
Query: 651 ACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP-NNKTHFHNLLSYSPLHNI 709
A + RP+L A VG LDMLR+NKFT ++G+ ++K F L SYSP+HN+
Sbjct: 564 ATMTMRPDLAKVAFPGVGVLDMLRYNKFTAGAGWAYDYGTAEDSKEMFEYLKSYSPVHNV 623
Query: 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
K T YP+T+V+T DHDDRV P HS+KF A LQ K KNP+L+R+E +AGHG
Sbjct: 624 KA---GTCYPSTMVITSDHDDRVVPAHSFKFGAELQAKQAC----KNPVLIRIETNAGHG 676
Query: 770 QGKALD 775
G++ +
Sbjct: 677 AGRSTE 682
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond. Elizabethkingia miricola (taxid: 172045) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|Q86AS5|PPCE_DICDI Prolyl endopeptidase OS=Dictyostelium discoideum GN=prep PE=1 SV=1 | Back alignment and function description |
|---|
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 245/780 (31%), Positives = 383/780 (49%), Gaps = 109/780 (13%)
Query: 56 YPKVRKDETVEDDYHG-----MKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDR 110
YP+ R+D++V D + +K+ DPYR LE ET+ + +N I+ +
Sbjct: 5 YPETRRDDSVFDIFKSTEKGSVKVYDPYRHLEDQQSPETKKWVDEENKITRSFLD----- 59
Query: 111 EAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNY 170
Q++T E I ++++M N+E++ +R+ +
Sbjct: 60 ----------------------------QDNT-SEKISNEIMKMLNFERFDWFRRRGSKL 90
Query: 171 FYFHNKGLQNHSILYV---------------QRNLTGSTEVFLDPNKLSKDGTTALKLYA 215
F+ N N +I+Y+ + + E FL+PN SKDGT +LK +
Sbjct: 91 FFSRNPNTLNQNIIYLIDIDQISISKDGKSSAKGFENAIE-FLNPNTYSKDGTWSLKSFV 149
Query: 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--------------------------DYP 249
S +G H + SK+GSDW + +K + T D P
Sbjct: 150 ISKSGDHVCFSYSKAGSDWEEIAVKKIITTNELKTNKDDEEEKEDLKKKNCLHYAVVDLP 209
Query: 250 EVLKNVKFPSISWTHDHKGFFYNQYCDINGTAD---GTETTAHMGQKIYYHVLGTEQDK- 305
+ + KF SI W + GF YN+Y +D GTET ++ K+YYH LG +
Sbjct: 210 DSINWCKFTSIKWDENETGFIYNRYPKPEKVSDDDKGTETDTNLNNKVYYHKLGDANESF 269
Query: 306 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365
D V E P +E + L +S + Y + F ++
Sbjct: 270 DRVVFECPENPQWIFGTEFSHDHSSLFISAFRDCNVEHNLYVIRNFQEAIANKSAFKVEA 329
Query: 366 VIPGMDHHHEIIANNGP-ELIVKTTKNAPKGKVVTINLNN-----PCEKN---WKTLIPE 416
+I D + I N E T +AP ++++I LN+ P K+ +K +IPE
Sbjct: 330 LIDNFDACYYYITNTKQGEYFFLTNLSAPFNRLISIQLNDDQPIVPNSKSKLEFKEIIPE 389
Query: 417 DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN 476
++ L+ V+ + K V Y ++V+ +++++D N GK L L +S ++
Sbjct: 390 -KDYVLESVSRSSQEKFYVSYQKHVQDIIEVYDFN-GKYLKDIKLPGPGSASLSATEYHD 447
Query: 477 EVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRS-KD 535
+F F++ + P Y+ D + + +F+E + F+ + ++ KQV++ S KD
Sbjct: 448 HIFINFSNLVSPSVTYY-------MDSKNDELLLFKEPHIEGFKSSDYECKQVFYESPKD 500
Query: 536 GTRVPMYIIHR-VGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR 594
T++PM+I ++ + + P + GYGG+ +S +FSI FL FNGI+ I NIR
Sbjct: 501 KTKIPMFIAYKKTTDITSGNAPTYMTGYGGFNISYTQSFSIRNIYFLNKFNGIFVIANIR 560
Query: 595 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654
GGGE G+ WH AG KQNCFDDF AAEY+I + YT + + GGSNGGLL+GA N
Sbjct: 561 GGGEYGKAWHEAGSKKNKQNCFDDFIGAAEYLIKENYTNQNKLAVRGGSNGGLLMGAISN 620
Query: 655 QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPN 714
QRP+L+ + VG +DMLRF+ TI S++G +N F L+ YSPL+N VP +
Sbjct: 621 QRPDLFKCVVADVGVMDMLRFHLHTIGSNWVSDYGRSDNPDDFDVLIKYSPLNN--VPKD 678
Query: 715 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774
+ QYP+ ++ TGDHDDRV P HSYKFI+ LQ ++G PLL+RV++D+GHG GK L
Sbjct: 679 SNQYPSIMLCTGDHDDRVIPAHSYKFISELQYQLGKKV--DTPLLIRVDKDSGHGAGKGL 736
|
Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Dictyostelium discoideum (taxid: 44689) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: 2 EC: 6 |
| >sp|P55577|Y4NA_RHISN Uncharacterized peptidase y4nA OS=Rhizobium sp. (strain NGR234) GN=NGR_a02410 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 172/326 (52%), Gaps = 17/326 (5%)
Query: 431 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQ---ITHISGRRKYNEVFYGFTSFLQ 487
N+L++ + NV S + D G SF L L + ++ S + +++F FL+
Sbjct: 377 NRLVLSILSNVTSEVRSFDFGKGG-WSSFKLALPENSTLSLTSSDDESDQLFVFSEGFLE 435
Query: 488 PGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRV 547
P T++ + ++ P F+ Q +Q + SKDGT+VP +++ R
Sbjct: 436 PSTLFCADAATGQVEKITSTPA--------RFDAGGLQAQQFWATSKDGTKVPYFLVARK 487
Query: 548 GALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607
+ NP I+Y YGG+ + + P++S G YA+ NIRGGGE G WH+AG
Sbjct: 488 DVKLDGTNPTILYAYGGFQIPMQPSYSAVLGKLWLEKGGAYALANIRGGGEFGPKWHDAG 547
Query: 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667
+Q +DDFQA A+ +I KK T ++ IMGGSNGGLL+G + QRP+L+ A +I V
Sbjct: 548 LKTNRQRVYDDFQAVAQDLIAKKVTSTPHLGIMGGSNGGLLMGVQMIQRPDLWNAVVIQV 607
Query: 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD 727
LDM+ F + + ++E+GSP++ L S SP HN+K YP T
Sbjct: 608 PLLDMVNFTRMSAGASWQAEYGSPDDPVEGAFLRSISPYHNVKA---GVAYPEPFFETST 664
Query: 728 HDDRVPPLHSYKFIATLQEKIGSLPY 753
DDRV P+H+ K +A L E +G LP+
Sbjct: 665 KDDRVGPVHARK-MAALFEDMG-LPF 688
|
Rhizobium sp. (strain NGR234) (taxid: 394) EC: 3 EC: . EC: 4 EC: . EC: 2 EC: 1 EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 783 | ||||||
| 357629634 | 706 | putative prolyl endopeptidase isoform 1 | 0.865 | 0.960 | 0.485 | 0.0 | |
| 345480007 | 783 | PREDICTED: prolyl endopeptidase-like [Na | 0.863 | 0.863 | 0.472 | 0.0 | |
| 321468258 | 708 | hypothetical protein DAPPUDRAFT_304946 [ | 0.864 | 0.956 | 0.457 | 0.0 | |
| 270015147 | 727 | Prolyl oligopeptidase [Tribolium castane | 0.860 | 0.927 | 0.472 | 0.0 | |
| 383857012 | 770 | PREDICTED: prolyl endopeptidase-like [Me | 0.913 | 0.928 | 0.436 | 0.0 | |
| 194761818 | 755 | GF14099 [Drosophila ananassae] gi|190616 | 0.862 | 0.894 | 0.477 | 0.0 | |
| 195050557 | 711 | GH13380 [Drosophila grimshawi] gi|193899 | 0.862 | 0.949 | 0.473 | 0.0 | |
| 289739935 | 717 | putative serine protease [Glossina morsi | 0.859 | 0.938 | 0.468 | 0.0 | |
| 291227779 | 716 | PREDICTED: prolyl endopeptidase-like [Sa | 0.860 | 0.941 | 0.467 | 0.0 | |
| 24583414 | 756 | CG5355 [Drosophila melanogaster] gi|2294 | 0.862 | 0.892 | 0.472 | 0.0 |
| >gi|357629634|gb|EHJ78277.1| putative prolyl endopeptidase isoform 1 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/723 (48%), Positives = 468/723 (64%), Gaps = 45/723 (6%)
Query: 52 FTGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDRE 111
T YP+ R+DETV D+YHG + DPYRWLE P ET+ F +NNI+ P+ +
Sbjct: 1 MTFDYPEARRDETVVDNYHGTNVSDPYRWLEDPDSDETKAFIEAENNITRPFLDS----- 55
Query: 112 AIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYF 171
C TD I +L + NY KYS P R+ + YF
Sbjct: 56 --------------------------CPVKTD---INSRLTELWNYPKYSCPFRRGDRYF 86
Query: 172 YFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG 231
+F N GLQN ++LYVQ +L G VFLDPN LS+DGT AL F+++G FAY LS SG
Sbjct: 87 FFKNTGLQNQNVLYVQDSLDGEPRVFLDPNTLSEDGTIALSGSRFTEDGSTFAYGLSASG 146
Query: 232 SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291
SDW T+H+KDV TG DYPEVL+ VKF S+SWT D+KG FY++Y + G DG+ET +
Sbjct: 147 SDWITIHLKDVATGVDYPEVLEKVKFASMSWTKDNKGLFYSRYPEQTGKTDGSETDVNRD 206
Query: 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351
QK+ YH L T Q+ D+ VVEFP + +EV+DCGRYLLVS + + + L + DL S
Sbjct: 207 QKLCYHRLNTPQEDDVIVVEFPQEPLWRIGAEVSDCGRYLLVSPVRDCRDNLLFFADLSS 266
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
++G L ++ + +E I N G I +T KNAP +++ I+LNNP E+NW+
Sbjct: 267 ---ASLTGHLQLTQIVHKFEADYEYITNEGSVCIFRTNKNAPNYRLIKIDLNNPAEENWE 323
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
TLI E LD +AV +KL++HYI++V+SV+ LH + TG + +F L +G I SG
Sbjct: 324 TLIAEHPTDVLDWASAVDKDKLVIHYIRDVKSVLQLHSMKTGDLMQNFDLGVGSIVGFSG 383
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
+++ +E+FY F SFL PG IYH + + + PTIFRE V F+ + ++ KQV++
Sbjct: 384 KKEQSEIFYHFMSFLTPGVIYHVDFKKQ-----PYAPTIFREVKVKGFDASQYEAKQVFY 438
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGTRVPM+I+ + G R+ P ++YGYGG+ ++V P+FS++R +F++HF G A+P
Sbjct: 439 SSKDGTRVPMFIVSKKGLPRDGSRPALLYGYGGFNINVQPSFSVTRIVFMQHFEGSVAVP 498
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WHNAGRLL KQN FDDF +A EY++ + YT+P + + GGSNGGLLV A
Sbjct: 499 NIRGGGEYGERWHNAGRLLNKQNVFDDFISAGEYLVREGYTRPGLLAVQGGSNGGLLVAA 558
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
NQRP+L GAA++ VG LDMLRF KFTI + S++GS +NKTHF NLL YSPLHNI+
Sbjct: 559 VANQRPDLLGAAIVQVGVLDMLRFQKFTIGHAWISDYGSSDNKTHFENLLKYSPLHNIQS 618
Query: 712 PPN--NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
P N +YPATLVLT DHDDRV PLHS K+IATLQ + P Q+ PLL R++ AGHG
Sbjct: 619 PDNVSRAEYPATLVLTADHDDRVVPLHSLKYIATLQHAVRGTP-QRRPLLARIDTKAGHG 677
Query: 770 QGK 772
GK
Sbjct: 678 GGK 680
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345480007|ref|XP_001603578.2| PREDICTED: prolyl endopeptidase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/717 (47%), Positives = 470/717 (65%), Gaps = 41/717 (5%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YPK R+DET D YHG++IKDPY+WLE P ET+ + QN I+ P+ Q
Sbjct: 83 YPKARRDETAVDVYHGVEIKDPYKWLEDPESEETKAYVDAQNAITVPFIQ---------- 132
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+ P R+AI ++L ++ +Y KYS P ++ + Y++F N
Sbjct: 133 -----------ACPK-------------RQAIHDRLKQLWDYPKYSCPAKKGSKYYFFMN 168
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN S+ YVQ +L G VFLDPN S DGT A+ FS++G +AY LS SGSDWN
Sbjct: 169 TGLQNQSVFYVQDSLDGEPRVFLDPNTFSTDGTVAISSGEFSEDGGIYAYALSASGSDWN 228
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+H + TG+ YPEVL+ VK+ SI+WTHD+ G FY Y + ADG+ET + QK+
Sbjct: 229 TIHFINTKTGEKYPEVLEKVKYSSITWTHDNVGVFYACYPEQLEKADGSETFVNKNQKLC 288
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
YH +GT Q +D+ VV+FP + ++VTDCGR+L+V + +L +F + +G
Sbjct: 289 YHKVGTPQSEDVVVVDFPEHPLWRIDAKVTDCGRWLVVMPQQECR-DNLVFFAKLNTAEG 347
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
I GK PL V+ ++ +E + N G + + +T KNAP K++ + N E +W LI
Sbjct: 348 -IKGKLPLTEVVGNLEADYEYVTNVGTKAVFRTNKNAPNFKLIATDFENYQENSWSELIA 406
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475
E LD AV +KL+V YI++V++V+ +H L TGK + PLD+G + SG KY
Sbjct: 407 EHSRNVLDWATAVDKDKLVVCYIEDVKNVLGVHSLETGKLIRQLPLDVGTVVGFSGDLKY 466
Query: 476 NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKD 535
+E+FY FTSFL PG IY ++ EN + KP +FRE V +F+ + ++T Q+++ SKD
Sbjct: 467 SEIFYQFTSFLTPGIIYTLDLKEN-----EEKPKVFREIKVNDFDASSYKTTQIFYSSKD 521
Query: 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG 595
GT++PM+I+H+ + + +P ++YGYGG+ VS+ PTFS++R +FL+H NG+ AIPNIRG
Sbjct: 522 GTKIPMFIVHKKDLVLDGSSPALLYGYGGFNVSIQPTFSVTRLVFLQHLNGVLAIPNIRG 581
Query: 596 GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655
GGE GE WHN GR KQN FDDFQ AAEY+I+ +YT PK + I GGSNGGLLVGAC+NQ
Sbjct: 582 GGEYGEKWHNGGRFTNKQNVFDDFQCAAEYLIDNRYTSPKKLIIQGGSNGGLLVGACINQ 641
Query: 656 RPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 715
RP+L+GAA+ VG +DML+F+KFT+ Y S++GS +++ HF NLL YSPLHN+K P +
Sbjct: 642 RPDLFGAAIAQVGVMDMLKFHKFTVGYAWTSDYGSSDDREHFKNLLKYSPLHNVKPPKDG 701
Query: 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
QYPATL+LT DHDDRV PLHS K IATLQ +IGSLP Q NP+L+R++ AGHG+GK
Sbjct: 702 GQYPATLLLTADHDDRVVPLHSLKLIATLQHEIGSLPQQTNPILIRIDVKAGHGRGK 758
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|321468258|gb|EFX79244.1| hypothetical protein DAPPUDRAFT_304946 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/717 (45%), Positives = 471/717 (65%), Gaps = 40/717 (5%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP ++ + E+ HG+ ++DPYRWLE P AETQ F +QN ++ PY Q
Sbjct: 6 YPIAKRTDFSEN-LHGIAVEDPYRWLEDPDSAETQEFVRLQNELTTPYIQG--------- 55
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+P +IK +L + N+ KYS P ++ N+YF++ N
Sbjct: 56 ------------SPALS-------------SIKTRLTELWNFPKYSCPTKKGNHYFFYKN 90
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQNHS+L+VQ +L +FLDPN LS DGT +L + FS++G+ FAY LS+SGSDWN
Sbjct: 91 SGLQNHSVLFVQDSLESEPRIFLDPNTLSDDGTVSLSMKKFSEDGEIFAYGLSQSGSDWN 150
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
++H K V TG+D+PEVL+ +KF SISWTHD KG FY+ Y + G DG+ETT++ K++
Sbjct: 151 SIHFKCVKTGEDFPEVLEKIKFSSISWTHDRKGVFYSCYPEQQGKTDGSETTSNENHKLF 210
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
YH +GT+Q +DI VVEF + VTDCGRYL+V+T + Q +++++ DL +LP+
Sbjct: 211 YHRIGTQQSEDILVVEFSEEPKWRIQGGVTDCGRYLIVTTGRDCQYNNVYFCDLTALPNQ 270
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
ISGK L TV+ M+ +E + N G ++ +T K+AP +++ I+ N P + WKTL+
Sbjct: 271 AISGKLELTTVVDKMEADYEYVTNTGAVVVFRTNKDAPNYRLIQIDFNQPEREQWKTLLE 330
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475
D + LD VA + +KLIV Y+ +V++++ L DL G+ L ++ L++G + SG+
Sbjct: 331 ADPSDVLDWVACINKDKLIVCYMHDVKNILQLRDLQNGQLLKTYALEMGTVREFSGKNTS 390
Query: 476 NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKD 535
+E F+ F SFL PG IY C+I E++ + +PT+FR+ + F+P+LF+T+QV++ SKD
Sbjct: 391 SEFFFQFGSFLTPGVIYRCDIGESV----EAEPTVFRQIELNGFDPSLFETQQVFYPSKD 446
Query: 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG 595
GTR+PM+I+ + + + NP ++YGYGG+ +S+ P FS++R +F++HFNG++A+PNIRG
Sbjct: 447 GTRIPMFIVKKKTVVLDGTNPCLMYGYGGFNISLEPAFSVTRIVFMQHFNGVFAVPNIRG 506
Query: 596 GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655
GGE GE WH+ GRL KQN FDDF +AAEY+I YT + I G SNGGLL+GAC+NQ
Sbjct: 507 GGEYGEAWHDGGRLFNKQNSFDDFHSAAEYLIANGYTSSSKLAIQGASNGGLLIGACVNQ 566
Query: 656 RPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 715
RPELY A + VG +DMLRF+KFT+ Y S++GSP K F NLL +SPLHN+KVP
Sbjct: 567 RPELYAAGIAHVGVMDMLRFHKFTVGYCWVSDYGSPEEKAAFENLLKFSPLHNLKVPETG 626
Query: 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
QYPA L+LT DHDDRV PLHS K++A + P Q NPL++R+E AGHG K
Sbjct: 627 -QYPAMLLLTADHDDRVVPLHSLKYMAQMHHTFRDCPKQTNPLMIRIETKAGHGANK 682
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|270015147|gb|EFA11595.1| Prolyl oligopeptidase [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/717 (47%), Positives = 462/717 (64%), Gaps = 43/717 (5%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP R+DETV+D+Y G +I DPYRWLE P ET+
Sbjct: 35 YPDARRDETVKDNYFGTEITDPYRWLEDPDSEETK------------------------- 69
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
KY V+ PY + +E+IK+++ ++ NY K+S P R Y+ + N
Sbjct: 70 ---------KYVDGQNAVTRPYLDGCSFKESIKKKITQLWNYPKFSTPYRHGTKYYQYRN 120
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN S++YVQ++L E+FLDPN S+DGT AL AFS++G+ FAY LS SGSDW
Sbjct: 121 TGLQNQSVIYVQKDLASKAEIFLDPNTFSEDGTVALSGTAFSEDGQTFAYGLSSSGSDWL 180
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
+ KDV+TGKDY E+LK VKF ++W HD+KGFFY Y D G ADG+ET + QK+Y
Sbjct: 181 EIKFKDVETGKDYKEILKKVKFSPMTWMHDNKGFFYGAYLDQTGKADGSETKTNENQKLY 240
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
YH LGT+Q +D+ VVEF + L + + V+ CG+YL+++ + + + L++ L S G
Sbjct: 241 YHELGTDQSQDVVVVEFDDPH-LRIGAHVSHCGKYLVITGTKGCKNNLLYFAQLDS---G 296
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
KI+GK L V+ E I N+ T KNA ++V I+ +NP E WK LI
Sbjct: 297 KITGKLKLTEVVTEFVADFEYITNDKNLFYFHTNKNASNYRIVIIDFDNPKESEWKDLIS 356
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475
E LD A+ N L+V Y+Q+V+++M L+D+ + +LH F LD+G I+ ISG++ +
Sbjct: 357 EHPKDVLDWAHAINENMLVVCYLQDVKNIMQLYDIKSSNKLHDFKLDVGTISAISGKKYH 416
Query: 476 NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKD 535
E+F+ F SFL P IY + DQ K T+F ET V +FE + ++TKQV+++SKD
Sbjct: 417 KEMFFSFCSFLTPNIIYKVDF-----DQGSIKETLFHETKVGDFESSKYETKQVFYKSKD 471
Query: 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG 595
GT +PM+II++ G + + P ++YGYGG+ V++ P+F +SR +F+ +F+G+YA+ NIRG
Sbjct: 472 GTEIPMFIINKKGLVNDGSKPCLLYGYGGFNVNLTPSFGVSRLVFIENFDGVYALANIRG 531
Query: 596 GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655
GGE G++WHN GR KKQNCFDDFQ AA+Y++ KYTK + I GGSNGGLLV AC+NQ
Sbjct: 532 GGEYGDNWHNGGRFGKKQNCFDDFQYAAKYLVENKYTKVDKLIIQGGSNGGLLVAACINQ 591
Query: 656 RPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 715
PEL+GAA+ VG LDMLRF+KFTI Y +S++G + F L YSPLHNI+VP N
Sbjct: 592 APELFGAAICQVGVLDMLRFHKFTIGYAWKSDYGCSEEQEQFEYLYKYSPLHNIRVPQNG 651
Query: 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
QYPATL+LT DHDDRV PLHS KFIA LQ KIG LP QKNPL++R+E AGHG GK
Sbjct: 652 GQYPATLLLTADHDDRVVPLHSLKFIAELQNKIGRLPTQKNPLMIRIETRAGHGAGK 708
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383857012|ref|XP_003704000.1| PREDICTED: prolyl endopeptidase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/765 (43%), Positives = 493/765 (64%), Gaps = 50/765 (6%)
Query: 10 SVVKYSQCVNSEFYNQSEPDASSSMSCESGPHPSEERAE--KVEFTGPYPKVRKDETVED 67
S ++++ C +S+F AS + + H ++ E KV YP+ +DE++ D
Sbjct: 28 STLEFALCNHSQFIR-----ASPFSTVKVFDHLVQKHMENKKVMEKLQYPEAYRDESIVD 82
Query: 68 DYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYS 127
+YHG+++ DPYRWLE P +T+ F QN ++ PY ++
Sbjct: 83 NYHGVEVPDPYRWLEDPDSEQTKAFVDAQNAVTKPYLES--------------------- 121
Query: 128 APHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQ 187
C+ R+ I ++L ++ ++ KYS P R N Y+++ N GLQN S+LYVQ
Sbjct: 122 ----------CKA---RQDIHDRLKQLWDFPKYSCPARYGNKYYFYKNTGLQNQSVLYVQ 168
Query: 188 RNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 247
L VFLDPN LS DGT A++ FS++G +AY LS SGSDW T+H + +TG+
Sbjct: 169 DTLDSEPRVFLDPNTLSDDGTVAIRSSKFSEDGSIYAYGLSSSGSDWCTIHFMNTETGEK 228
Query: 248 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 307
YPE+L+ VKF I+WTHD++G FY Y D G DG+ET + QK+ YH++GT Q +D+
Sbjct: 229 YPEILEKVKFSPITWTHDNRGIFYGCYPDQKGKTDGSETEGNRDQKLCYHIVGTPQSEDV 288
Query: 308 PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367
VEFP + +EV+DCG++L+V+ + + + +++ +L +PD KI+ K L V+
Sbjct: 289 IAVEFPEEPLWRIGAEVSDCGKWLIVTPVKDCRDNLVYFTEL--IPDTKITEKLQLTQVV 346
Query: 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA 427
++ +E + N+G + I +T KNAP K++ I+L + ++ W L+PE + LD A
Sbjct: 347 DKLEADYEYVTNDGTKAIFRTNKNAPNYKLIAIDLLDYKQEKWIDLLPEHPDNVLDWACA 406
Query: 428 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQ 487
V +K + YI++V++++ LH L TG+++ +FPLD+G I + +G++KY+E+FY F SFL
Sbjct: 407 VDGDKFVACYIEDVKNILQLHSLKTGEKIRTFPLDVGTIVNFAGQKKYSEIFYQFKSFLI 466
Query: 488 PGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRV 547
PG IY ++ + D +P + RE V F+P+L++T QV++ SKDGTR+PM+I+ +
Sbjct: 467 PGIIYKVDL------KTDEEPQVLREIKVKNFDPSLYKTSQVFYTSKDGTRIPMFIVMKH 520
Query: 548 GALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607
A+ + P ++YGYGG+ VS+ PTFS+++ +F++H NG+ A+ NIRGGGE GE WHN G
Sbjct: 521 DAVLDSSMPALLYGYGGFNVSIQPTFSVTKLVFVQHLNGVLAVANIRGGGEYGEKWHNGG 580
Query: 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667
R KQN FDDFQAAAEY+I+ YT ++I+GGSNGGLL+ AC NQRP+L+GAA+ V
Sbjct: 581 RFFNKQNVFDDFQAAAEYLIDNGYTTASKLSILGGSNGGLLIAACANQRPDLFGAAIAQV 640
Query: 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD 727
G +DMLRF+KFTI S++GS ++ HF NLL YSPLHN++VP N QYPATL+LT D
Sbjct: 641 GVMDMLRFHKFTIGVAWVSDYGSSDDPKHFENLLKYSPLHNVRVPENG-QYPATLLLTAD 699
Query: 728 HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
HDDRV PLHS K IATLQ +G LP Q NPLL+++E AGHG GK
Sbjct: 700 HDDRVVPLHSLKLIATLQNTLGKLPQQTNPLLIKIETKAGHGGGK 744
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194761818|ref|XP_001963120.1| GF14099 [Drosophila ananassae] gi|190616817|gb|EDV32341.1| GF14099 [Drosophila ananassae] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/720 (47%), Positives = 465/720 (64%), Gaps = 45/720 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP RKD TVEDD+HG IKD YRWLE P AET+ F QNNIS P+ ++ + I E
Sbjct: 51 YPIARKDPTVEDDFHGTPIKDVYRWLEDPDSAETEEFVNAQNNISRPFLESGDQWKKINE 110
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+L ++ NY KY P+ R N Y+YF N
Sbjct: 111 KLTKLWNYPKYGCPY----------------------------------RHGNYYYYFMN 136
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN S++Y Q+ L ++VFLDPN LS+DGT AL FS++GK+ AY LS+SGSDW
Sbjct: 137 TGLQNQSVMYQQKTLEDESQVFLDPNSLSEDGTIALTQKTFSEDGKYMAYGLSESGSDWV 196
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
+ I+D +TGKD EVL+ VKF ISWT D+KGFFY +Y D +G DG+ET + QK+Y
Sbjct: 197 KILIRDAETGKDLSEVLEKVKFSEISWTKDNKGFFYGRYPDQDGKTDGSETKQNENQKLY 256
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
YH +G QDKD VVEFP S + S V+DCG+YL+++ + + + + Y DL P
Sbjct: 257 YHRVGESQDKDTLVVEFPEEPSWRIQSTVSDCGKYLILAIVKDCRDNIVFYADLQ--PGE 314
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
+I+ K +K ++ + +E I N G ++ +T K AP +++ I+ P E NW+TLI
Sbjct: 315 EINSKLNVKKIVEKFEADYEYITNEGSKVYFRTNKKAPNYQLIVIDFEKPEEANWQTLIA 374
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475
E ++ LD V V +KL+V+YI++V+SV+ +H LN GK + F LD+G I +G ++Y
Sbjct: 375 EHKSDVLDWVKCVDGDKLLVNYIRDVKSVLQVHSLNDGKLVREFDLDIGTIVGTTGEKRY 434
Query: 476 NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETI--VPEFEPTLFQTKQVYFRS 533
+E+FY ++SFL PGTIY + D KP IFRE + F + +Q+++ S
Sbjct: 435 SEIFYNYSSFLNPGTIYQYDFK-----TPDQKPKIFREIKLNLEGFRQEDYAVEQIFYSS 489
Query: 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI 593
KDGT+VPM+II + R P ++YGYGG+ +S+LP+F +S MF+ F+G+ A PN+
Sbjct: 490 KDGTKVPMFIIAKKSDSIEPR-PCLLYGYGGFNISMLPSFGLSGLMFIDTFDGVLAYPNL 548
Query: 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
RGGGE GE WHN GRLL KQN FDDFQAAAEY+I+ KYT + I GGSNGGLLVG+C+
Sbjct: 549 RGGGEYGEKWHNGGRLLNKQNVFDDFQAAAEYLIDNKYTTKDRLAIQGGSNGGLLVGSCI 608
Query: 654 NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP 713
NQRP+L+GAA+ VG +DMLRF+KFTI + S++G+P+ K HF NL +SPLHN+ P
Sbjct: 609 NQRPDLFGAAVAQVGVMDMLRFHKFTIGHAWCSDYGNPSEKEHFENLYKFSPLHNVHTPK 668
Query: 714 NN-TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
++ T+YP+TL+LT DHDDRV PLHS KFIA LQE + +QKNPLLLRV Q AGHG GK
Sbjct: 669 SDETEYPSTLILTADHDDRVSPLHSLKFIAALQEAVRESEFQKNPLLLRVYQKAGHGAGK 728
|
Source: Drosophila ananassae Species: Drosophila ananassae Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195050557|ref|XP_001992919.1| GH13380 [Drosophila grimshawi] gi|193899978|gb|EDV98844.1| GH13380 [Drosophila grimshawi] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/720 (47%), Positives = 469/720 (65%), Gaps = 45/720 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP RKD+T+EDD+HG KIKD YRWLE P AETQ + QNNIS P+
Sbjct: 7 YPVARKDQTIEDDFHGSKIKDVYRWLEDPDAAETQEYVNSQNNISQPF------------ 54
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+ N E++ + I +L ++ NY KY P + Y++F N
Sbjct: 55 ----LENCEQW------------------KKINSKLTKLWNYPKYGCPMQYGKYYYFFMN 92
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN S++Y Q +L G ++VFLDPN LS+DGT AL +FSD+GK AY LS+SGSDW
Sbjct: 93 TGLQNQSVMYQQDSLHGESKVFLDPNGLSEDGTVALSQKSFSDDGKFMAYGLSESGSDWI 152
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
+ I+D +TGKD+ EVL+ VKF ISWT D+KGFFY +Y D +G DG+ET + QK+Y
Sbjct: 153 KIRIRDAETGKDFDEVLEKVKFSEISWTKDNKGFFYGRYPDQDGKTDGSETKQNEHQKLY 212
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
YH+LG Q KD+ VV+FP S + S+V+DCG+YL+++ + + + ++Y DL P
Sbjct: 213 YHLLGQSQAKDVLVVQFPKEPSWRIQSKVSDCGKYLILAIVKDCRDNIIYYADLK--PGE 270
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
+I + +K ++ + ++ + N G ++ +T KNA +++ I+ NP E NW+TLIP
Sbjct: 271 EIVSELDVKIIVDKFESDYDYVTNVGSKVYFRTNKNAQNYRIIIIDFENPGEANWETLIP 330
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475
E E L+ V V +KL++ YI++V++++ + L TGK + F LD+G I SG++KY
Sbjct: 331 EHEKDVLEWVKCVNEDKLLLCYIRDVKTILQANSLETGKLIRQFDLDIGTIVGTSGKKKY 390
Query: 476 NEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETI--VPEFEPTLFQTKQVYFRS 533
+E+FY F+SFL PGTIYH + D P +FRE + F + +Q+++ S
Sbjct: 391 SEIFYNFSSFLNPGTIYHYDFK-----HPDEPPKVFREIKLNLDGFRREDYAVEQIFYSS 445
Query: 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI 593
KDGT+VPM+II + + R P ++YGYGG+ +S+LPTF I+ MF+ F+G+ A PNI
Sbjct: 446 KDGTKVPMFIIRKNKNVLEPR-PCLLYGYGGFNISMLPTFGITGLMFVDTFDGVLAYPNI 504
Query: 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
RGGGE GE WHN GRLL KQN FDDFQ AAEY+IN KYT + I GGSNGGLLVGAC+
Sbjct: 505 RGGGEYGEKWHNGGRLLNKQNVFDDFQCAAEYLINNKYTTKDRLAIQGGSNGGLLVGACI 564
Query: 654 NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP 713
NQRP+L+GAA+ VG +DMLRF+KFTI + S++G+P+ K HF NL +SPLHN+ P
Sbjct: 565 NQRPDLFGAAVAQVGVMDMLRFHKFTIGHAWCSDYGNPSEKEHFDNLYKFSPLHNVHTPQ 624
Query: 714 N-NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
N N +YP+TL+LT DHDDRV PLHS KF A LQE + +Q+NPLLLRV + AGHG GK
Sbjct: 625 NENKEYPSTLILTADHDDRVSPLHSLKFAAALQEAVRDSKHQQNPLLLRVYKKAGHGAGK 684
|
Source: Drosophila grimshawi Species: Drosophila grimshawi Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|289739935|gb|ADD18715.1| putative serine protease [Glossina morsitans morsitans] | Back alignment and taxonomy information |
|---|
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/721 (46%), Positives = 470/721 (65%), Gaps = 48/721 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP+ R+D +V D +HG+++KD YRWLE P ETQ F +N IS P+ + +R++I E
Sbjct: 14 YPEAREDHSVSDTFHGVEMKDVYRWLEDPDSVETQQFVNEENKISQPFL-DCDERKSIYE 72
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFH- 174
+LL++ NYEKY P + NY+YF+
Sbjct: 73 KLLKLWNYEKYGCP-----------------------------------MKHGNYYYFNK 97
Query: 175 NKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDW 234
N GLQN S+LY Q+ L+ VFLDPN LS+DGT AL +FS+NGK+ AY LS+SGSDW
Sbjct: 98 NSGLQNQSVLYQQKTLSDEPSVFLDPNALSEDGTIALSQISFSENGKYMAYGLSESGSDW 157
Query: 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294
+H++DV+ GKD EVL+ VKF ISWT D+KGFFY Y D G DG+ET + QK+
Sbjct: 158 VKIHVRDVEKGKDVDEVLEKVKFSDISWTKDNKGFFYGCYLDQEGKTDGSETKQNENQKL 217
Query: 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354
YYH +G Q +DI + EFP+ + + SEV+DCG+YL++ + + + L+Y +L +
Sbjct: 218 YYHYVGKSQKEDILIAEFPDEPTWRIQSEVSDCGKYLIIPIVKDCRDNILYYSELDTT-- 275
Query: 355 GKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414
+ K + +I + ++ I N G ++ ++T KNAP +V+ I+ NP E NW TLI
Sbjct: 276 STMPSKLKMHKIIEKFEADYDYITNIGSKVYLRTNKNAPNYRVIVIDFENPSESNWITLI 335
Query: 415 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRK 474
PE E LD V V ++KL++ YIQ+V+S + ++ L+ GK + F LD+G I +SG++K
Sbjct: 336 PEHEKDVLDWVKCVDDDKLVLCYIQDVKSALQVNALSDGKLIGKFKLDIGTIVSLSGKKK 395
Query: 475 YNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETI--VPEFEPTLFQTKQVYFR 532
Y+EVF+ F+SFL PGTIYH + DF+P I RE + +F+PT + KQ+++
Sbjct: 396 YSEVFFNFSSFLNPGTIYHYDFTSK-----DFQPKIHREIKLNLQDFKPTNYDVKQIFYN 450
Query: 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN 592
SKDGT++PM+I+ + + R P ++YGYGG+ +S+ PTFS++ +F+ FNGI A PN
Sbjct: 451 SKDGTKIPMFIVQKQADVTTPR-PCLLYGYGGFNISIQPTFSLTGLLFMETFNGIIAYPN 509
Query: 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652
+RGGGE GE WHN+GRLL KQN FDDF AAAEY+I+ YT + I GGSNGGLLV AC
Sbjct: 510 LRGGGEYGEKWHNSGRLLNKQNVFDDFHAAAEYLIDNNYTSKDRLVIQGGSNGGLLVCAC 569
Query: 653 LNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 712
+NQRP+L+GAA+ VG LDMLRF+KFTI + S++G+PN + HF NLL YSPLHN++ P
Sbjct: 570 INQRPDLFGAAVAQVGVLDMLRFHKFTIGHAWCSDYGNPNEEEHFKNLLKYSPLHNVRTP 629
Query: 713 PN-NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771
+ +YP+TL+LT DHDDRV PLHS KF A LQ + + P+Q NP+LLRV AGHG G
Sbjct: 630 QSPKEEYPSTLILTADHDDRVSPLHSLKFAAALQTAVRNSPFQNNPILLRVYSKAGHGAG 689
Query: 772 K 772
K
Sbjct: 690 K 690
|
Source: Glossina morsitans morsitans Species: Glossina morsitans Genus: Glossina Family: Glossinidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|291227779|ref|XP_002733861.1| PREDICTED: prolyl endopeptidase-like [Saccoglossus kowalevskii] | Back alignment and taxonomy information |
|---|
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/721 (46%), Positives = 464/721 (64%), Gaps = 47/721 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YPK R+DE+ +DYHG KI +PY WLE P ET+ F QN ++ PY +
Sbjct: 5 YPKARRDESKIEDYHGTKIAEPYEWLEDPDSEETKAFVEAQNAVTMPYLEK--------- 55
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
C+ R+ ++L M ++ KY P ++ YFYF+N
Sbjct: 56 ----------------------CKI---RQKFHDRLKAMWDFPKYGCPFKRGPRYFYFYN 90
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
GLQN S+LYVQ ++ +VFLDPNK S DGT AL+ Y+F+++G++ AY LS SGSDW
Sbjct: 91 TGLQNQSVLYVQDSIEAEAKVFLDPNKFSDDGTVALRGYSFTEDGEYLAYGLSDSGSDWV 150
Query: 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIY 295
T+ V ++ P++LK VKF +SWTHD KG FYN+Y + G DGTETTA++ QK+
Sbjct: 151 TVKFMKVAGSEELPDILKRVKFSCMSWTHDGKGLFYNRYLEQEGKTDGTETTANLDQKLC 210
Query: 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD----LHYFDLHS 351
YH+LGTEQ D+ EFP+ +E+TD GRY+L+S S +G D L+Y D+ +
Sbjct: 211 YHILGTEQSSDVLCAEFPDEPKWMSGAELTDDGRYILLSIS---EGCDPVNRLYYCDMKT 267
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
L DG I G P ++ D +E IAN G KT N+P+ K++ I+++ P +NWK
Sbjct: 268 LTDG-IKGLIPWVKLVDNFDAEYEYIANEGTLFTFKTNLNSPRYKLINIDISKPEMENWK 326
Query: 412 TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
LI + + L+ + V N+KL++ Y+ +V+S + LH+LNTG RL +FPLD+G IT SG
Sbjct: 327 DLISQADTDVLEWASCVNNDKLMLCYLHDVKSQLYLHELNTGNRLTTFPLDVGTITGYSG 386
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531
++K +E+FY FTSFL PG IY C++ D +P++FR+ V F+ + FQT QV+F
Sbjct: 387 KKKDHEIFYQFTSFLTPGIIYRCDLS-----ADKLEPSVFRQIDVKGFDQSQFQTVQVFF 441
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
SKDGT++PM+I+HR G + +PV++YGYGG+ +S+ P FS+SR +F++H GI AIP
Sbjct: 442 SSKDGTKIPMFIVHRKGIELDGSHPVLLYGYGGFNISITPGFSVSRIVFIQHLGGILAIP 501
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
NIRGGGE GE WH G L KQNCFDDFQ AA+++I KYT IT+ GGSNGGLLV A
Sbjct: 502 NIRGGGEYGETWHKGGMLANKQNCFDDFQFAAQWLIENKYTSANKITLNGGSNGGLLVAA 561
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C NQRP+L+G + VG +DML+F+KFTI + ++FG K +F L+ YSPLHNIK
Sbjct: 562 CANQRPDLFGCIINQVGVMDMLKFHKFTIGHAWITDFGCSEKKDNFEYLIKYSPLHNIKS 621
Query: 712 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771
P +TQYP+ L+LT DHDDRV PLHS K+IA LQ +GS Q NPL++R++ AGHG G
Sbjct: 622 PDGDTQYPSMLLLTADHDDRVVPLHSLKYIAELQHTMGSESKQTNPLMIRLDTKAGHGAG 681
Query: 772 K 772
K
Sbjct: 682 K 682
|
Source: Saccoglossus kowalevskii Species: Saccoglossus kowalevskii Genus: Saccoglossus Family: Harrimaniidae Order: Class: Enteropneusta Phylum: Hemichordata Superkingdom: Eukaryota |
| >gi|24583414|ref|NP_609397.2| CG5355 [Drosophila melanogaster] gi|22946157|gb|AAF52942.2| CG5355 [Drosophila melanogaster] gi|54650756|gb|AAV36957.1| LP07359p [Drosophila melanogaster] gi|220952068|gb|ACL88577.1| CG5355-PA [synthetic construct] | Back alignment and taxonomy information |
|---|
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/722 (47%), Positives = 465/722 (64%), Gaps = 47/722 (6%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP RKDE+V +D+HG +IKD YRWLE P ET+ F QN+IS P+ +N + + +
Sbjct: 50 YPVARKDESVAEDFHGTQIKDVYRWLEDPDSTETEEFVNAQNSISRPFLENGEEWKKLNT 109
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+L ++ NY KY P +R NY Y+YF N
Sbjct: 110 KLTKLWNYPKYGCP----------------------MRYGNY------------YYYFMN 135
Query: 176 KGLQNHSILYVQRNLTGSTE--VFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD 233
GLQN S++Y Q++L +E VFLDPN LS+DGT AL AFS++GK+ AY LS+SGSD
Sbjct: 136 TGLQNQSVMYQQKSLGDESESKVFLDPNTLSEDGTIALTQKAFSEDGKYMAYGLSESGSD 195
Query: 234 WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293
W + I+D +TGKD EVL+ VKF ISWT D+KGFFY +Y D +G DG+ET + QK
Sbjct: 196 WIKILIRDAETGKDLSEVLEKVKFSEISWTKDNKGFFYGRYPDQDGKTDGSETKQNENQK 255
Query: 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 353
+YYH +G QDKD VVEFP S + S V+DCG+YL+++ + + + + Y DL P
Sbjct: 256 LYYHRVGESQDKDTLVVEFPEEPSWRIQSTVSDCGKYLILAIVKDCRDNIVFYADL--TP 313
Query: 354 DGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413
+I+ K +K ++ + ++ I N G ++ +T KNAP +V+ I+ NN E W+TL
Sbjct: 314 GAEITSKLNVKKIVEKFEADYDYITNEGSKIFFRTNKNAPNYQVIAIDFNNSAEDKWETL 373
Query: 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473
I E ++ LD V V N+KL+V YI++V+SV+ ++ L G L F LD+G I SG +
Sbjct: 374 IAEHKSDVLDWVKCVDNDKLLVCYIRDVKSVLQVNSLKDGTLLREFDLDIGTIVGTSGEK 433
Query: 474 KYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETI--VPEFEPTLFQTKQVYF 531
KY+E+FY F+SFL PG+IY + D P++FRE + F + +Q+++
Sbjct: 434 KYSEIFYNFSSFLNPGSIYRYDFK-----TPDKSPSVFREIKLNLEGFRREDYAVEQIFY 488
Query: 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP 591
+SKDGT+VPM+II + R P ++YGYGG+ +S+LP+F +S MF+ F+G+ A P
Sbjct: 489 KSKDGTKVPMFIIRKKRDSVEPR-PCLLYGYGGFNISMLPSFGLSGLMFIDTFDGVLAYP 547
Query: 592 NIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651
N+RGGGE GE WHN GRLL KQN FDDFQAAAEY+I KYT + I GGSNGGLLVG+
Sbjct: 548 NLRGGGEYGEKWHNGGRLLNKQNVFDDFQAAAEYLIENKYTTKDRLAIQGGSNGGLLVGS 607
Query: 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKV 711
C+NQRP+L+GAA+ VG +DMLRF+KFTI + S++G+P+ K HF NL +SPLHN+
Sbjct: 608 CINQRPDLFGAAVAQVGVMDMLRFHKFTIGHAWCSDYGNPSEKEHFDNLYKFSPLHNVHT 667
Query: 712 PPN-NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770
P T+YP+TL+LT DHDDRV PLHS KFIA LQE + +QKNP+LLRV Q AGHG
Sbjct: 668 PKGAETEYPSTLILTADHDDRVSPLHSLKFIAALQEAVRDSEFQKNPVLLRVYQKAGHGA 727
Query: 771 GK 772
GK
Sbjct: 728 GK 729
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 783 | ||||||
| MGI|MGI:1270863 | 710 | Prep "prolyl endopeptidase" [M | 0.809 | 0.892 | 0.465 | 1.9e-177 | |
| RGD|620841 | 710 | Prep "prolyl endopeptidase" [R | 0.809 | 0.892 | 0.465 | 6.5e-177 | |
| UNIPROTKB|O70196 | 710 | Prep "Prolyl endopeptidase" [R | 0.809 | 0.892 | 0.465 | 6.5e-177 | |
| UNIPROTKB|F6QHN4 | 702 | PREP "Prolyl endopeptidase" [B | 0.809 | 0.903 | 0.459 | 5.2e-175 | |
| UNIPROTKB|P23687 | 710 | PREP "Prolyl endopeptidase" [S | 0.809 | 0.892 | 0.456 | 1.1e-174 | |
| ZFIN|ZDB-GENE-050522-14 | 709 | prep "prolyl endopeptidase" [D | 0.805 | 0.889 | 0.450 | 4.1e-173 | |
| UNIPROTKB|Q9XTA2 | 710 | PREP "Prolyl endopeptidase" [B | 0.809 | 0.892 | 0.451 | 5.3e-173 | |
| UNIPROTKB|F1PHW5 | 699 | PREP "Uncharacterized protein" | 0.809 | 0.907 | 0.459 | 1.1e-172 | |
| UNIPROTKB|F1PHX2 | 710 | PREP "Uncharacterized protein" | 0.809 | 0.892 | 0.459 | 1.1e-172 | |
| FB|FBgn0032969 | 733 | CG2528 [Drosophila melanogaste | 0.807 | 0.862 | 0.441 | 2.1e-169 |
| MGI|MGI:1270863 Prep "prolyl endopeptidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1584 (562.7 bits), Expect = 1.9e-177, Sum P(2) = 1.9e-177
Identities = 299/642 (46%), Positives = 420/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 109 EARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +DI EF
Sbjct: 169 ERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL P+G I+G +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQEPNG-ITGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +N+P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYVTNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +V++++ LHDL TG L +FPLD+G + SGR+K +E+FY FTSFL PG I
Sbjct: 348 FLVLCYLHDVKNILQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVI 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLTK-----EELEPMVFREVTVKGIDAADYQTIQIFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV AC NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+KFTI + +++G + K HF LL YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 583 MLKFHKFTIGHAWTTDYGCSDTKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGAGK 684
|
|
| RGD|620841 Prep "prolyl endopeptidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1575 (559.5 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 299/642 (46%), Positives = 421/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 109 EARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +D+ EF
Sbjct: 169 ERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL +G I+G +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQGSNG-INGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ I N G KT +N+P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYITNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y++NV++++ LHDL TG L +FPLD+G + SGR+K +E+FY FTSFL PG I
Sbjct: 348 FLVLCYLRNVKNILQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVI 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ +++ +P +FRE V + + +QT QV++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLT-----REELEPRVFREVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT K +TI GGSNGGLLV AC NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+KFTI + +++G ++K HF LL YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 583 MLKFHKFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGPGK 684
|
|
| UNIPROTKB|O70196 Prep "Prolyl endopeptidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1575 (559.5 bits), Expect = 6.5e-177, Sum P(2) = 6.5e-177
Identities = 299/642 (46%), Positives = 421/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 109 EARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +D+ EF
Sbjct: 169 ERVKFTCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL +G I+G +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIWEGCDPVNRLWYCDLQQGSNG-INGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ I N G KT +N+P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYITNEGTVFTFKTNRNSPNYRLINIDFTDPDESKWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y++NV++++ LHDL TG L +FPLD+G + SGR+K +E+FY FTSFL PG I
Sbjct: 348 FLVLCYLRNVKNILQLHDLTTGALLKTFPLDVGSVVGYSGRKKDSEIFYQFTSFLSPGVI 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ +++ +P +FRE V + + +QT QV++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLT-----REELEPRVFREVTVKGIDASDYQTIQVFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT K +TI GGSNGGLLV AC NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQCAAEYLIKEGYTTSKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+KFTI + +++G ++K HF LL YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 583 MLKFHKFTIGHAWTTDYGCSDSKQHFEWLLKYSPLHNVKLPEADDIQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSLKFIATLQYIVGRSRKQSNPLLIHVDTKAGHGPGK 684
|
|
| UNIPROTKB|F6QHN4 PREP "Prolyl endopeptidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1574 (559.1 bits), Expect = 5.2e-175, Sum P(2) = 5.2e-175
Identities = 295/642 (45%), Positives = 420/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 41 ITVPFLEQCPIRGLYKERMTELYDYPKYSCNFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 100
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 101 EARVFLDPNTLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 160
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +DI EF
Sbjct: 161 ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEF 220
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DLH P+G I+G +I +
Sbjct: 221 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLHQEPNG-ITGILKWVKLIDNFE 279
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +++P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 280 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESRWKVLVPEHEKDVLEWVACVRSN 339
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +V++ + LHDL TG L +FPL++G + SG++K E+FY FTSFL PG I
Sbjct: 340 FLVLCYLHDVKNTLQLHDLATGALLKTFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 399
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 400 YHCDLTK-----EELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKL 454
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 455 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 514
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV C NQRP+L+G + VG +D
Sbjct: 515 KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 574
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+K+TI + +++G +NK HF L+ YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 575 MLKFHKYTIGHAWTTDYGCSDNKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDD 634
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 635 RVVPLHSLKFIATLQHLVGRSRKQNNPLLIHVDTKAGHGAGK 676
|
|
| UNIPROTKB|P23687 PREP "Prolyl endopeptidase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1554 (552.1 bits), Expect = 1.1e-174, Sum P(2) = 1.1e-174
Identities = 293/642 (45%), Positives = 418/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 109 EARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+YYHVLGT+Q +DI EF
Sbjct: 169 ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL +G I+G +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG-ITGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +++P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +V++ + LHDL TG L FPL++G + SG++K E+FY FTSFL PG I
Sbjct: 348 FLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLTK-----EELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV C NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+K+TI + +++G ++K HF L+ YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 583 MLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK 684
|
|
| ZFIN|ZDB-GENE-050522-14 prep "prolyl endopeptidase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1517 (539.1 bits), Expect = 4.1e-173, Sum P(2) = 4.1e-173
Identities = 288/639 (45%), Positives = 404/639 (63%)
Query: 136 PYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTE 195
P+ + R+ KE++ + +Y KYS P ++ + YF+F+N GLQN S++YVQ NL
Sbjct: 51 PFLEQCETRDLFKERMTELYDYPKYSCPFKRGDRYFHFYNTGLQNQSVMYVQDNLDAEPT 110
Query: 196 VFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV 255
VFLDPN S+DGT AL+ Y+FS++G+ AY S SGSDW + VD + L+ V
Sbjct: 111 VFLDPNTFSEDGTVALRGYSFSEDGEFLAYGTSASGSDWVEIRFLRVDGAVLLEDRLERV 170
Query: 256 KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 315
KF +SWTHD KG FYN Y + G +DGTET+ ++ QK+YYHVLGT Q +D+ EFP+
Sbjct: 171 KFTCMSWTHDGKGLFYNSYPEQEGKSDGTETSTNLHQKLYYHVLGTPQSQDVLCAEFPDE 230
Query: 316 RSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMDHHH 374
EV+D GRY+L+S + L Y DL+ P G I+G P +I D +
Sbjct: 231 PKWMSGVEVSDDGRYVLLSIREGCDPVNRLWYCDLNEEPQG-ITGLLPWVKLIDNFDAEY 289
Query: 375 EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 434
E + N G KT AP+ +++ I+ P WK LIP+ + + ++ L
Sbjct: 290 EYVTNEGTVFTFKTNLEAPQYRLINIDFTQPSVSQWKELIPQHDKDVIVFATCTFSSFLF 349
Query: 435 VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494
V ++ +V++V+ + L++G+ + +FPLD+G I +GR+K +E+FY FTSFL P IYHC
Sbjct: 350 VCFLHDVKNVLKMFHLSSGEEIRTFPLDVGSIVGFTGRKKDSEIFYSFTSFLSPAIIYHC 409
Query: 495 NIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRR 554
++ + +P +FRE V F P +QT QV++ SKDGT++PM+I+H+ G +
Sbjct: 410 DLT-----MEPLQPHVFREVTVKGFNPADYQTTQVFYPSKDGTQIPMFIVHKKGIKMDGS 464
Query: 555 NPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 614
+P + +S+ P++S+SR +F+RH G+ A+ NIRGGGE GE WH G L KQN
Sbjct: 465 HPAFLYGYGGFNISITPSYSVSRLIFIRHLGGVLAVANIRGGGEYGETWHKGGMLANKQN 524
Query: 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674
CF DFQ AAEY+I + YT PK +TI GGSNGGLLV AC+NQRP+L+G A+ VG +DML+
Sbjct: 525 CFTDFQCAAEYLIKEGYTSPKKLTINGGSNGGLLVAACVNQRPDLFGCAVAQVGVMDMLK 584
Query: 675 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN-TQYPATLVLTGDHDDRVP 733
F+KFTI + ++FG K F L+ YSPLHNI+VP + QYPA L+LTGDHDDRV
Sbjct: 585 FHKFTIGHAWTTDFGCSEIKEQFDWLIKYSPLHNIQVPEGDGVQYPAVLLLTGDHDDRVV 644
Query: 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
PLHS K+IATLQ IG P QKNPL + ++ +GHG GK
Sbjct: 645 PLHSLKYIATLQNVIGQCPGQKNPLFIYIDTKSGHGAGK 683
|
|
| UNIPROTKB|Q9XTA2 PREP "Prolyl endopeptidase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1542 (547.9 bits), Expect = 5.3e-173, Sum P(2) = 5.3e-173
Identities = 290/642 (45%), Positives = 416/642 (64%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPIRGLYKERMTELYDYPKYSCNFKKGKRYFYFYNTGLQNQRVLYVQDSLEG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
V LDPN LS DGT AL+ YAFS++G++ AY LS SGSDW T+ VD K+ +VL
Sbjct: 109 EARVCLDPNTLSDDGTVALRGYAFSEDGEYVAYGLSASGSDWVTIKFMKVDGAKELADVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +DI EF
Sbjct: 169 ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDILCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DLH P+G I+G +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLHQEPNG-ITGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +++P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESRWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +V++ + LHD+ TG L +FPL++G + SG++K E+FY FTSFL PG I
Sbjct: 348 FLVLCYLHDVKNTLQLHDMATGALLKTFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLTK-----EELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+ R +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVCRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV C NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+K+TI + +++G +NK HF L+ YSPLHN+K+P ++ QYP+ L+LT DHDD
Sbjct: 583 MLKFHKYTIGHAWTTDYGCSDNKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSPKFIATLQHLVGRSRKQNNPLLIHVDTKAGHGAGK 684
|
|
| UNIPROTKB|F1PHW5 PREP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1564 (555.6 bits), Expect = 1.1e-172, Sum P(2) = 1.1e-172
Identities = 295/642 (45%), Positives = 421/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 38 ITVPFLEQCPLRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDG 97
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 98 EARVFLDPNLLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 157
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +D+ EF
Sbjct: 158 ERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEF 217
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL +G ISG +I +
Sbjct: 218 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG-ISGILKWVKLIDNFE 276
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +++P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 277 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN 336
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +VR+++ LHDL TG L +FPL++G I SG++K E+FY FTSFL PG I
Sbjct: 337 FLVLCYLHDVRNILQLHDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGII 396
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 397 YHCDLTK-----EELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKL 451
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 452 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 511
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV AC NQRP+L+G + VG +D
Sbjct: 512 KQNCFDDFQHAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMD 571
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+K+TI + +++G ++K HF L+ YSPLHN+++P ++TQYP+ L+LT DHDD
Sbjct: 572 MLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDD 631
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 632 RVVPLHSLKFIATLQYVVGRSRKQSNPLLIHVDTKAGHGAGK 673
|
|
| UNIPROTKB|F1PHX2 PREP "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1564 (555.6 bits), Expect = 1.1e-172, Sum P(2) = 1.1e-172
Identities = 295/642 (45%), Positives = 421/642 (65%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
++ P+ + R KE++ + +Y KYS ++ YFYF+N GLQN +LYVQ +L G
Sbjct: 49 ITVPFLEQCPLRGLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLDG 108
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW T+ VD K+ P+VL
Sbjct: 109 EARVFLDPNLLSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL 168
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+ YHVLGT+Q +D+ EF
Sbjct: 169 ERVKFSCMAWTHDGKGMFYNSYPQQDGKSDGTETSTNLHQKLCYHVLGTDQSEDVLCAEF 228
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPGMD 371
P+ +E++D GRY+L+S + L Y DL +G ISG +I +
Sbjct: 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNG-ISGILKWVKLIDNFE 287
Query: 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431
++ + N G KT +++P +++ I+ +P E WK L+PE E L+ VA V +N
Sbjct: 288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSN 347
Query: 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTI 491
L++ Y+ +VR+++ LHDL TG L +FPL++G I SG++K E+FY FTSFL PG I
Sbjct: 348 FLVLCYLHDVRNILQLHDLATGALLKTFPLEVGSIVGYSGQKKDTEIFYQFTSFLSPGII 407
Query: 492 YHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALR 551
YHC++ + ++ +P +FRE V + + +QT Q+++ SKDGT++PM+I+H+ G
Sbjct: 408 YHCDLTK-----EELEPRVFREVTVKGIDASDYQTVQIFYPSKDGTKIPMFIVHKKGIKL 462
Query: 552 NRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
+ +P + +S+ P +S+SR +F+RH G+ A+ NIRGGGE GE WH G L
Sbjct: 463 DGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILAN 522
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV AC NQRP+L+G + VG +D
Sbjct: 523 KQNCFDDFQHAAEYLIKEGYTSPKRLTINGGSNGGLLVAACANQRPDLFGCVIAQVGVMD 582
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDD 730
ML+F+K+TI + +++G ++K HF L+ YSPLHN+++P ++TQYP+ L+LT DHDD
Sbjct: 583 MLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVRLPEADDTQYPSMLLLTADHDD 642
Query: 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
RV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 643 RVVPLHSLKFIATLQYVVGRSRKQSNPLLIHVDTKAGHGAGK 684
|
|
| FB|FBgn0032969 CG2528 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1490 (529.6 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 285/645 (44%), Positives = 409/645 (63%)
Query: 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTG 192
+S + + +RE I +L ++ N+ KY P R N Y++F N GLQN S+L Q+ L
Sbjct: 70 ISQSFLERSAERENINSKLTKLWNFPKYGCPMRHGNYYYFFKNTGLQNQSVLMQQKTLES 129
Query: 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL 252
+FLD N +S DGTTA+ FS++G AY LS+SGSDWN + I++ G D PE+L
Sbjct: 130 PESIFLDTNSISSDGTTAISHIKFSEDGAFMAYGLSESGSDWNKIRIRNTKEGIDLPEIL 189
Query: 253 KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312
+ VKF ++SWT D KGFFY +Y D +G DG+ET QK+YYH+LG +DI + EF
Sbjct: 190 EKVKFSNVSWTKDSKGFFYGRYTDQDGIFDGSETKLAENQKLYYHLLGESPHQDILIAEF 249
Query: 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372
P S ++++DCG+YL++S S+ + + L+Y +L S + K + + LK ++ +
Sbjct: 250 PEHPSWRFKTDISDCGKYLILSISHTVRDNMLYYAELGS--EEKNAFQLELKPIVDKFEA 307
Query: 373 HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNK 432
+ I N G L T K+AP +V+ I++NNP E++W T IPE + L+ V NK
Sbjct: 308 DFDYITNEGSNLYFHTNKDAPNYRVIVIDVNNPAEEHWTTPIPEHKKDVLEWAKCVDGNK 367
Query: 433 LIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 492
L+V Y +V+ ++ DL+TGK + F LD+G I ISG++ +E+FYGF+SFL PG I+
Sbjct: 368 LVVCYNCDVKHILQARDLSTGKLIRQFGLDIGSINGISGKKSNSEIFYGFSSFLSPGIIF 427
Query: 493 HCNIPENITDQDDFKPTIFRETIV--PEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGAL 550
+ + + KPT+ RE + F + +QV+++S D T +PM+I+ R +
Sbjct: 428 YYDFAK-----PSEKPTVLREISLNLEGFSRDNYSVEQVFYKSTDDTDIPMFIVQRKRDI 482
Query: 551 RNRRNPVIIXXXXXXXVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610
R P ++ S++P+F I MF+ F+G+ A PN+RGGGE G +WHN GR+L
Sbjct: 483 AEPR-PCLLYGYGGFNYSLMPSFGILSLMFMDTFDGVLAFPNLRGGGEYGMEWHNGGRML 541
Query: 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670
KQN F+DFQAAAE++ YT + I G SNGGLLVGAC+NQRP+L+GAA+ VG +
Sbjct: 542 SKQNVFNDFQAAAEFLTKNNYTTKDRLAIQGASNGGLLVGACINQRPDLFGAAVAQVGVM 601
Query: 671 DMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPN-NTQYPATLVLTGDHD 729
DMLRF+KFTI + S++G+P+ K HF NL+ +SPLHN+ +P N N +YP+TL+LT DHD
Sbjct: 602 DMLRFHKFTIGHAWCSDYGNPDEKVHFANLIKFSPLHNVHIPLNPNQEYPSTLILTADHD 661
Query: 730 DRVPPLHSYKFIATLQEK--IGSLPYQKNPLLLRVEQDAGHGQGK 772
DRV PLHSYKF+A LQE + YQ NP+LLRV AGHG GK
Sbjct: 662 DRVSPLHSYKFVAALQEAEAVRYSEYQLNPILLRVYTKAGHGAGK 706
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9XTA2 | PPCE_BOVIN | 3, ., 4, ., 2, 1, ., 2, 6 | 0.4459 | 0.8607 | 0.9492 | yes | N/A |
| Q86AS5 | PPCE_DICDI | 3, ., 4, ., 2, 1, ., 2, 6 | 0.3141 | 0.8569 | 0.8828 | yes | N/A |
| Q9QUR6 | PPCE_MOUSE | 3, ., 4, ., 2, 1, ., 2, 6 | 0.4570 | 0.8607 | 0.9492 | yes | N/A |
| O70196 | PPCE_RAT | 3, ., 4, ., 2, 1, ., 2, 6 | 0.4584 | 0.8607 | 0.9492 | yes | N/A |
| P48147 | PPCE_HUMAN | 3, ., 4, ., 2, 1, ., 2, 6 | 0.4556 | 0.8607 | 0.9492 | yes | N/A |
| P23687 | PPCE_PIG | 3, ., 4, ., 2, 1, ., 2, 6 | 0.4487 | 0.8607 | 0.9492 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 783 | |||
| COG1505 | 648 | COG1505, COG1505, Serine proteases of the peptidas | 1e-129 | |
| pfam02897 | 412 | pfam02897, Peptidase_S9_N, Prolyl oligopeptidase, | 1e-111 | |
| COG1770 | 682 | COG1770, PtrB, Protease II [Amino acid transport a | 7e-97 | |
| pfam00326 | 212 | pfam00326, Peptidase_S9, Prolyl oligopeptidase fam | 4e-60 | |
| PRK10115 | 686 | PRK10115, PRK10115, protease 2; Provisional | 3e-52 | |
| COG1506 | 620 | COG1506, DAP2, Dipeptidyl aminopeptidases/acylamin | 6e-23 |
| >gnl|CDD|224422 COG1505, COG1505, Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 399 bits (1027), Expect = e-129
Identities = 222/708 (31%), Positives = 329/708 (46%), Gaps = 95/708 (13%)
Query: 76 DPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSN 135
DPYRWLE AE + QN + + S R A ++LL
Sbjct: 4 DPYRWLEDLDSAEALKWVEAQNAKTREFLGEDSARAASDKRLL----------------- 46
Query: 136 PYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN-----KGLQNHSILYVQRNL 190
+L +YE P + Y+ F +GL + L R+
Sbjct: 47 --------------ELW---DYEDIPIPFERGGRYYNFWQDALYPRGLYRRTTLETYRSA 89
Query: 191 TGSTEVFLDPNKLSKDG--TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY 248
EV +D + LS D AL + +G Y LS GSD D++TG+
Sbjct: 90 KPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETGEFV 149
Query: 249 PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG---QKIYYHVLGTEQDK 305
E + KFP ISW D G F ++Y +T + +++ L Q+
Sbjct: 150 EE--EGFKFPGISWL-DDDGVFVSRY-----WRPKEKTPSGYPRVVKRLKRGKLFEGQEG 201
Query: 306 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365
D+ V + G +++ G + ++S T G L L PD K+ ++
Sbjct: 202 DVMVNARGDQDPWGFRLVLSEDGDFFMLSLWLGTSGKGLIKLGL---PD-KVGYEW--GK 255
Query: 366 VIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 425
++ + + L + T ++ GKV+ IPE E ++L+ V
Sbjct: 256 LVNTLRADWTFADVDYGLLYLLTDEDLELGKVIAE------------FIPE-EEQSLEQV 302
Query: 426 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTS 484
+KL+ + NV ++++DL G+R+ L G + S + +EVF FTS
Sbjct: 303 VTT-KDKLVAGTLDNVSGRLEVYDLK-GERIEEVELPPPGALGMGSADKDGDEVFLAFTS 360
Query: 485 FLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYII 544
F P T+Y D + + RE V +F+ ++ +Q + SKDGTR+P +I+
Sbjct: 361 FTTPSTLYR-------LDLFGGELEVIREQPV-QFDADNYEVEQFFATSKDGTRIPYFIV 412
Query: 545 HRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604
+ GA ++ NP ++Y YGG+ +S+ P FS SR ++L G++ + NIRGGGE G +WH
Sbjct: 413 RK-GAKKDE-NPTLLYAYGGFNISLTPRFSGSRKLWLER-GGVFVLANIRGGGEFGPEWH 469
Query: 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAAL 664
AG KQN FDDF A AE +I + T P+ + I GGSNGGLLVGA L QRPEL+GAA+
Sbjct: 470 QAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAV 529
Query: 665 ILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVL 724
V LDMLR++ T +E+G+P++ LL+YSP HN+K +YP TL+
Sbjct: 530 CEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLK---PGQKYPPTLIT 586
Query: 725 TGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
T HDDRV P H+ KF A LQE P+LLR E GHG
Sbjct: 587 TSLHDDRVHPAHARKFAAKLQE-------VGAPVLLREETKGGHGGAA 627
|
Length = 648 |
| >gnl|CDD|217275 pfam02897, Peptidase_S9_N, Prolyl oligopeptidase, N-terminal beta-propeller domain | Back alignment and domain information |
|---|
Score = 343 bits (881), Expect = e-111
Identities = 156/446 (34%), Positives = 233/446 (52%), Gaps = 53/446 (11%)
Query: 57 PKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQ 116
P R+DETV D+YHG + DPYRWLE E + +N + +
Sbjct: 1 PPTRRDETVVDEYHGDVVSDPYRWLEDDDSPEVLAWVEAENKYTEDF------------- 47
Query: 117 LLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNK 176
+A + RE IKE+L + NY+ SAP R+ Y+YF N
Sbjct: 48 ---LAQLKPL-----------------REKIKEELTALINYDDISAPFRKGGYYYYFRNT 87
Query: 177 GLQNHSILYVQRNLTG---STEVFLDPNKLSKDG--TTALKLYAFSDNGKHFAYCLSKSG 231
G +N S+LY + G + EVFLDPN LS+DG T AL YAFS +G+ AY LS SG
Sbjct: 88 GGKNQSVLYRRDAGEGPGETEEVFLDPNTLSEDGDFTVALDGYAFSPDGRLLAYSLSLSG 147
Query: 232 SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291
SDW T+ +DV+TG+ P+VL+ VKF I W D+KGFFY++Y + + ++
Sbjct: 148 SDWYTIRFRDVETGEPLPDVLEGVKFSGIVWAPDNKGFFYSRY------DEPERGSTNLN 201
Query: 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351
QK++ H LGT Q +D+ V E P+ L +E +D G+YL +S+++ T ++L+ DL
Sbjct: 202 QKVWRHRLGTPQSQDVLVFEEPDEPFWYLGAERSDDGKYLFISSASGTDVNELYVLDLAQ 261
Query: 352 LPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411
D PL+ V+P D + + + G T AP ++V ++LN+P +WK
Sbjct: 262 EKD------GPLRKVVPRFDGVYYYVEHEGDTFYFLTNDGAPNFRLVRVDLNDPSPADWK 315
Query: 412 TLIPE-DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL-HSFPLDLGQITHI 469
+I E E+ L+ + V N L++ Y ++ S + + DL G L F +G ++
Sbjct: 316 DVIVEHREDVLLEEI-TVFGNYLVLSYRRDALSRLQVFDLGGGGVLFEEFLPGVGSVSSA 374
Query: 470 SGRRKYNEVFYGFTSFLQPGTIYHCN 495
SG +E+ Y F+SFL PGTIY +
Sbjct: 375 SGEYDDDELRYSFSSFLTPGTIYDLD 400
|
This unusual 7-stranded beta-propeller domain protects the catalytic triad of prolyl oligopeptidase (see pfam00326), excluding larger peptides and proteins from proteolysis in the cytosol. Length = 412 |
| >gnl|CDD|224684 COG1770, PtrB, Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 315 bits (809), Expect = 7e-97
Identities = 195/734 (26%), Positives = 332/734 (45%), Gaps = 100/734 (13%)
Query: 55 PYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDRE-AI 113
P P + K +HG D Y WL +N SNP + + E A
Sbjct: 4 PLPPIAKKVPTTRTHHGDTRVDDYAWL-------------RDDNWSNPEVLAYLEAENAY 50
Query: 114 KEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANY---EKYSAPQRQENNY 170
E ++ + +++++ E + ++ Y
Sbjct: 51 TEAVM-----------------------AHLQPLQKKIFEEIKGRIKEDDLSVPYRKGPY 87
Query: 171 FYFH--NKGLQNHSILYVQRNLTGSTE-VFLDPNKLSKDGT-TALKLYAFSDNGKHFAYC 226
Y+ +G + + I Q + G E V LD NK ++ +L + S + AY
Sbjct: 88 EYYSRTEEGKE-YPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYS 146
Query: 227 LSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286
+ G + TL KD+ TG++ P+ + N S +W D K FY
Sbjct: 147 VDVLGDEQYTLRFKDLATGEELPDEITNT-SGSFAWAADGKTLFY-----------TRLD 194
Query: 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHY 346
H K++ H LGT D V E + R L + Y+++S + S++
Sbjct: 195 ENHRPDKVWRHRLGTPGSSDELVYEEKDDRFF-LSVGRSRSEAYIVIS-LGSHITSEVRL 252
Query: 347 FDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406
D P+ + K V+P + + + G + + + K+V + +
Sbjct: 253 LDA-DDPEAE------PKVVLPRENGVEYSVEHGGDRFYILSNADGKNFKLVRAPV-SAD 304
Query: 407 EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQ 465
+ NW+ LIP E+ L+ V A++ L++ Q + + D TG+ R +F D
Sbjct: 305 KSNWRELIPHREDVRLEGVDLFADH-LVLLERQEGLPRVVVRDRKTGEERGIAFD-DEAY 362
Query: 466 ITHISGRRKYNE--VFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVP-EFEPT 522
+SG +++ + Y ++S P T++ ++ + T+ ++ VP F+P
Sbjct: 363 SAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATG-------ERTLLKQQEVPGGFDPE 415
Query: 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL- 581
+ +++++ + DG +VP+ +++R + P+++YGYG YG+S+ P+FSI+R L
Sbjct: 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLD 475
Query: 582 RHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMG 641
R F +YAI ++RGGGELG W+ G+LL K+N F DF AAA +++ + YT P I +G
Sbjct: 476 RGF--VYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIG 533
Query: 642 GSNGGLLVGACLNQRPELYGAALILVGALD----MLRFN-KFTIAYYSESEFGSPNNKTH 696
GS GG+L+GA N P+L+ + V +D ML + T+ + E+G+P + +
Sbjct: 534 GSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEW--DEWGNPLDPEY 591
Query: 697 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE-KIGSLPYQK 755
+ + SYSP N++ P YPA LV TG +D RV K++A L+E K
Sbjct: 592 YDYIKSYSPYDNVEAQP----YPAILVTTGLNDPRVQYWEPAKWVAKLRELKTDG----- 642
Query: 756 NPLLLRVEQDAGHG 769
NPLLL+ DAGHG
Sbjct: 643 NPLLLKTNMDAGHG 656
|
Length = 682 |
| >gnl|CDD|215859 pfam00326, Peptidase_S9, Prolyl oligopeptidase family | Back alignment and domain information |
|---|
Score = 202 bits (515), Expect = 4e-60
Identities = 80/196 (40%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
Query: 580 FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITI 639
L + A+ N RG G G WH+AG+ QN FDDF AAAEY+I + Y P + I
Sbjct: 9 LLADRGYVVAVANGRGSGGYGRAWHDAGKGDLGQNEFDDFIAAAEYLIAQGYVDPDRLAI 68
Query: 640 MGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSE-SEFGSP-NNKTHF 697
GGS GG L GA LNQRP+L+ AA+ +V +D L + T + E+G+P +N+ +
Sbjct: 69 WGGSYGGYLTGAALNQRPDLFKAAVAVVPVVDWLTYMSDTSPFTERYMEWGNPWDNEEGY 128
Query: 698 HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757
L YSP N+K YP L++ G HDDRVPP + K +A LQ K
Sbjct: 129 RYLSPYSPYDNVK------AYPPLLLIHGLHDDRVPPAEALKLVAALQAK-------GKN 175
Query: 758 LLLRVEQDAGHGQGKA 773
+LL + D GHG GK
Sbjct: 176 VLLLIFPDEGHGGGKP 191
|
Length = 212 |
| >gnl|CDD|182247 PRK10115, PRK10115, protease 2; Provisional | Back alignment and domain information |
|---|
Score = 193 bits (491), Expect = 3e-52
Identities = 152/551 (27%), Positives = 261/551 (47%), Gaps = 63/551 (11%)
Query: 237 LHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 296
+ ++++TG YPE+L NV+ PS W +D F+Y + + +++
Sbjct: 155 IRFRNLETGNWYPELLDNVE-PSFVWANDSWTFYYVR----------KHPVTLLPYQVWR 203
Query: 297 HVLGTEQDKDIPVVEFPNGR-SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355
H +GT +D V E + + LH T Y+++ ++ T L L D
Sbjct: 204 HTIGTPASQDELVYEEKDDTFYVSLHK--TTSKHYVVIHLASATTSEVL-------LLDA 254
Query: 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415
+++ P +P H + + +++ ++ + + + E+ W+ LIP
Sbjct: 255 ELADAEPF-VFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRD--EQQWEELIP 311
Query: 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH---SFPLDLGQITHISGR 472
EN L+ + L+V Q R + L +N R +F D +T I+
Sbjct: 312 PRENIMLEGFTLFTD-WLVVEERQ--RGLTSLRQINRKTREVIGIAFD-DPAYVTWIA-- 365
Query: 473 RKYN------EVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQT 526
YN + YG++S P T++ D D + + ++T VP F+ +++
Sbjct: 366 --YNPEPETSRLRYGYSSMTTPDTLFE-------LDMDTGERRVLKQTEVPGFDAANYRS 416
Query: 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RHFN 585
+ ++ ++DG VP+ +++ R NP+++YGYG YG S+ FS SR L R F
Sbjct: 417 EHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGF- 475
Query: 586 GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNG 645
+YAI ++RGGGELG+ W+ G+ LKK+N F+D+ A + ++ Y P MGGS G
Sbjct: 476 -VYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAG 534
Query: 646 GLLVGACLNQRPELYGAALILVGALDMLRF---NKFTIAYYSESEFGSPNNKTHFHNLLS 702
G+L+G +NQRPEL+ + V +D++ + E+G+P + ++ + S
Sbjct: 535 GMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKS 594
Query: 703 YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762
YSP N+ YP LV TG HD +V K++A L+E L + LLL
Sbjct: 595 YSPYDNVTA----QAYPHLLVTTGLHDSQVQYWEPAKWVAKLRE----LKTDDHLLLLCT 646
Query: 763 EQDAGHGQGKA 773
+ D+GHG GK+
Sbjct: 647 DMDSGHG-GKS 656
|
Length = 686 |
| >gnl|CDD|224423 COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 6e-23
Identities = 100/569 (17%), Positives = 182/569 (31%), Gaps = 92/569 (16%)
Query: 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYC 275
+S +G A+ + G + VD G + V S
Sbjct: 67 WSPDGSVLAFVSTDGGRVA---QLYLVDVGGLITKTAFGVSDARWSP------------- 110
Query: 276 DINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 335
D + A T A + + +PV G V D L+
Sbjct: 111 DGDRIAFLTAEGASKRDGGDHLFV-----DRLPVWFDGRG-GERSDLYVVDIESKLIKLG 164
Query: 336 SNNTQGSDLHYFDLHSLPDGKIS-GKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN--- 391
N + DG++ P + + + +I NG + T
Sbjct: 165 LGNLD-----VVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESL-TPGEGSI 218
Query: 392 -----APKGKVVTINLNNPCEKNW----KTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442
GK + + L ++ L+ + E +D + ++ ++
Sbjct: 219 SKLAFDADGKSIAL-LGTESDRGLAEGDFILLLDGELGEVDGDLSSGDDTRGAWAVEGGL 277
Query: 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFL--------------QP 488
L + T S + + G + G F +P
Sbjct: 278 DGDGLLFIATDGGGSSPLFRVDDLGG--GVEGLSGDDGGVPGFDVDGRKLALAYSSPTEP 335
Query: 489 GTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVG 548
IY ++ K T + + + L + + V ++S DG + ++ G
Sbjct: 336 PEIYL------YDRGEEAKLTSSNNSGLKKV--KLAEPEPVTYKSNDGETIHGWLYKPPG 387
Query: 549 ALRNRRNPVIIYGYGG----YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604
++ P+I+Y +GG G S P + + + + PN RG G ++
Sbjct: 388 FDPRKKYPLIVYIHGGPSAQVGYSFNPEIQV---LASAGYAVLA--PNYRGSTGYGREFA 442
Query: 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAAL 664
+A R +D AA + ++ P+ I I GGS GG + + P A
Sbjct: 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVA 502
Query: 665 ILVGALDMLRFNKFTIAY---YSESEFGSPNNKTHFHNLLSYSPL---HNIKVPPNNTQY 718
+ G +L F + T E+ G P ++ + SP+ NIK P
Sbjct: 503 VAGGVDWLLYFGESTEGLRFDPEENGGGPPEDREKY---EDRSPIFYADNIKTP------ 553
Query: 719 PATLVLTGDHDDRVPPLHSYKFIATLQEK 747
L++ G+ DDRVP + + + L+ K
Sbjct: 554 --LLLIHGEEDDRVPIEQAEQLVDALKRK 580
|
Length = 620 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 783 | |||
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 100.0 | |
| KOG2237|consensus | 712 | 100.0 | ||
| PRK10115 | 686 | protease 2; Provisional | 100.0 | |
| COG1505 | 648 | Serine proteases of the peptidase family S9A [Amin | 100.0 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 100.0 | |
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 100.0 | |
| KOG2281|consensus | 867 | 100.0 | ||
| KOG2100|consensus | 755 | 100.0 | ||
| PF00326 | 213 | Peptidase_S9: Prolyl oligopeptidase family This fa | 99.97 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.87 | |
| PRK13604 | 307 | luxD acyl transferase; Provisional | 99.83 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.82 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.82 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.81 | |
| PLN02442 | 283 | S-formylglutathione hydrolase | 99.8 | |
| PRK10566 | 249 | esterase; Provisional | 99.8 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.8 | |
| TIGR02821 | 275 | fghA_ester_D S-formylglutathione hydrolase. This m | 99.8 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.79 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.79 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.78 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.78 | |
| TIGR01840 | 212 | esterase_phb esterase, PHB depolymerase family. Th | 99.75 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.74 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.74 | |
| PRK10162 | 318 | acetyl esterase; Provisional | 99.73 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.72 | |
| PF05448 | 320 | AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR0 | 99.72 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.72 | |
| PRK05077 | 414 | frsA fermentation/respiration switch protein; Revi | 99.72 | |
| PLN02298 | 330 | hydrolase, alpha/beta fold family protein | 99.72 | |
| COG3458 | 321 | Acetyl esterase (deacetylase) [Secondary metabolit | 99.71 | |
| PF01738 | 218 | DLH: Dienelactone hydrolase family; InterPro: IPR0 | 99.7 | |
| COG0412 | 236 | Dienelactone hydrolase and related enzymes [Second | 99.68 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.66 | |
| COG0657 | 312 | Aes Esterase/lipase [Lipid metabolism] | 99.65 | |
| KOG1552|consensus | 258 | 99.65 | ||
| COG1647 | 243 | Esterase/lipase [General function prediction only] | 99.64 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.64 | |
| PLN02385 | 349 | hydrolase; alpha/beta fold family protein | 99.64 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.64 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.63 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.63 | |
| PF07859 | 211 | Abhydrolase_3: alpha/beta hydrolase fold A web pag | 99.62 | |
| PHA02857 | 276 | monoglyceride lipase; Provisional | 99.61 | |
| PRK11460 | 232 | putative hydrolase; Provisional | 99.6 | |
| PRK10749 | 330 | lysophospholipase L2; Provisional | 99.56 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 99.56 | |
| PF10503 | 220 | Esterase_phd: Esterase PHB depolymerase | 99.56 | |
| PRK05371 | 767 | x-prolyl-dipeptidyl aminopeptidase; Provisional | 99.55 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.55 | |
| KOG4391|consensus | 300 | 99.52 | ||
| PLN02652 | 395 | hydrolase; alpha/beta fold family protein | 99.51 | |
| KOG1455|consensus | 313 | 99.5 | ||
| KOG1515|consensus | 336 | 99.5 | ||
| PF02129 | 272 | Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 fam | 99.49 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.49 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.49 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 99.48 | |
| PRK10985 | 324 | putative hydrolase; Provisional | 99.47 | |
| PF02230 | 216 | Abhydrolase_2: Phospholipase/Carboxylesterase; Int | 99.46 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 99.45 | |
| TIGR00976 | 550 | /NonD putative hydrolase, CocE/NonD family. This m | 99.44 | |
| PLN02511 | 388 | hydrolase | 99.43 | |
| COG2267 | 298 | PldB Lysophospholipase [Lipid metabolism] | 99.42 | |
| COG3509 | 312 | LpqC Poly(3-hydroxybutyrate) depolymerase [Seconda | 99.41 | |
| PF12695 | 145 | Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3 | 99.41 | |
| TIGR03611 | 257 | RutD pyrimidine utilization protein D. This protei | 99.4 | |
| TIGR03343 | 282 | biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-die | 99.4 | |
| PRK00870 | 302 | haloalkane dehalogenase; Provisional | 99.39 | |
| COG2945 | 210 | Predicted hydrolase of the alpha/beta superfamily | 99.38 | |
| TIGR01607 | 332 | PST-A Plasmodium subtelomeric family (PST-A). Thes | 99.36 | |
| TIGR02427 | 251 | protocat_pcaD 3-oxoadipate enol-lactonase. Members | 99.35 | |
| COG0400 | 207 | Predicted esterase [General function prediction on | 99.33 | |
| PF06500 | 411 | DUF1100: Alpha/beta hydrolase of unknown function | 99.33 | |
| TIGR03056 | 278 | bchO_mg_che_rel putative magnesium chelatase acces | 99.33 | |
| PF12715 | 390 | Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8 | 99.32 | |
| TIGR01250 | 288 | pro_imino_pep_2 proline-specific peptidases, Bacil | 99.32 | |
| PRK11071 | 190 | esterase YqiA; Provisional | 99.3 | |
| PLN02872 | 395 | triacylglycerol lipase | 99.3 | |
| TIGR03100 | 274 | hydr1_PEP hydrolase, ortholog 1, exosortase system | 99.3 | |
| PLN00021 | 313 | chlorophyllase | 99.29 | |
| COG0429 | 345 | Predicted hydrolase of the alpha/beta-hydrolase fo | 99.29 | |
| COG4099 | 387 | Predicted peptidase [General function prediction o | 99.28 | |
| TIGR01249 | 306 | pro_imino_pep_1 proline iminopeptidase, Neisseria- | 99.27 | |
| TIGR01738 | 245 | bioH putative pimeloyl-BioC--CoA transferase BioH. | 99.26 | |
| PRK03204 | 286 | haloalkane dehalogenase; Provisional | 99.26 | |
| PRK10673 | 255 | acyl-CoA esterase; Provisional | 99.26 | |
| PF12697 | 228 | Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3 | 99.26 | |
| TIGR03101 | 266 | hydr2_PEP hydrolase, ortholog 2, exosortase system | 99.25 | |
| PRK03592 | 295 | haloalkane dehalogenase; Provisional | 99.25 | |
| TIGR02240 | 276 | PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer | 99.24 | |
| PLN02824 | 294 | hydrolase, alpha/beta fold family protein | 99.23 | |
| PLN02965 | 255 | Probable pheophorbidase | 99.23 | |
| PLN03087 | 481 | BODYGUARD 1 domain containing hydrolase; Provision | 99.22 | |
| TIGR03695 | 251 | menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene | 99.21 | |
| KOG4667|consensus | 269 | 99.18 | ||
| PRK06489 | 360 | hypothetical protein; Provisional | 99.17 | |
| PRK14875 | 371 | acetoin dehydrogenase E2 subunit dihydrolipoyllysi | 99.16 | |
| TIGR01392 | 351 | homoserO_Ac_trn homoserine O-acetyltransferase. Th | 99.14 | |
| KOG4178|consensus | 322 | 99.14 | ||
| PLN02894 | 402 | hydrolase, alpha/beta fold family protein | 99.13 | |
| PLN02679 | 360 | hydrolase, alpha/beta fold family protein | 99.12 | |
| PRK10439 | 411 | enterobactin/ferric enterobactin esterase; Provisi | 99.12 | |
| PRK10349 | 256 | carboxylesterase BioH; Provisional | 99.12 | |
| COG2272 | 491 | PnbA Carboxylesterase type B [Lipid metabolism] | 99.09 | |
| KOG1838|consensus | 409 | 99.08 | ||
| PLN02578 | 354 | hydrolase | 99.08 | |
| PRK00175 | 379 | metX homoserine O-acetyltransferase; Provisional | 99.08 | |
| cd00312 | 493 | Esterase_lipase Esterases and lipases (includes fu | 99.07 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 99.06 | |
| KOG4627|consensus | 270 | 99.06 | ||
| TIGR01836 | 350 | PHA_synth_III_C poly(R)-hydroxyalkanoic acid synth | 99.06 | |
| PLN02211 | 273 | methyl indole-3-acetate methyltransferase | 99.04 | |
| PRK07581 | 339 | hypothetical protein; Validated | 99.04 | |
| PF00756 | 251 | Esterase: Putative esterase; InterPro: IPR000801 T | 99.04 | |
| KOG0293|consensus | 519 | 99.02 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.02 | |
| PF03583 | 290 | LIP: Secretory lipase ; InterPro: IPR005152 This e | 99.02 | |
| PF08840 | 213 | BAAT_C: BAAT / Acyl-CoA thioester hydrolase C term | 99.01 | |
| PRK08775 | 343 | homoserine O-acetyltransferase; Provisional | 99.0 | |
| PRK11126 | 242 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxyl | 98.93 | |
| KOG3043|consensus | 242 | 98.92 | ||
| KOG2624|consensus | 403 | 98.86 | ||
| PLN03084 | 383 | alpha/beta hydrolase fold protein; Provisional | 98.86 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 98.83 | |
| COG2936 | 563 | Predicted acyl esterases [General function predict | 98.82 | |
| PF12740 | 259 | Chlorophyllase2: Chlorophyllase enzyme; InterPro: | 98.8 | |
| KOG0279|consensus | 315 | 98.79 | ||
| PLN02980 | 1655 | 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi | 98.78 | |
| KOG3101|consensus | 283 | 98.76 | ||
| KOG4409|consensus | 365 | 98.76 | ||
| PRK06765 | 389 | homoserine O-acetyltransferase; Provisional | 98.74 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.73 | |
| PF00561 | 230 | Abhydrolase_1: alpha/beta hydrolase fold A web pag | 98.72 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.72 | |
| KOG0293|consensus | 519 | 98.71 | ||
| KOG1454|consensus | 326 | 98.7 | ||
| KOG0318|consensus | 603 | 98.68 | ||
| PF00135 | 535 | COesterase: Carboxylesterase family The prints ent | 98.68 | |
| PF05728 | 187 | UPF0227: Uncharacterised protein family (UPF0227); | 98.67 | |
| TIGR01838 | 532 | PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, | 98.67 | |
| KOG0271|consensus | 480 | 98.64 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.61 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 98.6 | |
| COG0627 | 316 | Predicted esterase [General function prediction on | 98.58 | |
| PF06342 | 297 | DUF1057: Alpha/beta hydrolase of unknown function | 98.56 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.56 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 98.52 | |
| COG2819 | 264 | Predicted hydrolase of the alpha/beta superfamily | 98.51 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 98.5 | |
| cd00707 | 275 | Pancreat_lipase_like Pancreatic lipase-like enzyme | 98.49 | |
| PF08538 | 303 | DUF1749: Protein of unknown function (DUF1749); In | 98.49 | |
| KOG2112|consensus | 206 | 98.48 | ||
| COG2382 | 299 | Fes Enterochelin esterase and related enzymes [Ino | 98.47 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.47 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.47 | |
| PF10340 | 374 | DUF2424: Protein of unknown function (DUF2424); In | 98.47 | |
| COG4757 | 281 | Predicted alpha/beta hydrolase [General function p | 98.46 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 98.46 | |
| PF03403 | 379 | PAF-AH_p_II: Platelet-activating factor acetylhydr | 98.45 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.44 | |
| PTZ00421 | 493 | coronin; Provisional | 98.42 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.42 | |
| KOG0266|consensus | 456 | 98.4 | ||
| PF06821 | 171 | Ser_hydrolase: Serine hydrolase; InterPro: IPR0106 | 98.38 | |
| PF07224 | 307 | Chlorophyllase: Chlorophyllase; InterPro: IPR01082 | 98.35 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.35 | |
| KOG2314|consensus | 698 | 98.35 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.33 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 98.3 | |
| KOG0315|consensus | 311 | 98.27 | ||
| PRK07868 | 994 | acyl-CoA synthetase; Validated | 98.26 | |
| COG4188 | 365 | Predicted dienelactone hydrolase [General function | 98.26 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.25 | |
| KOG2984|consensus | 277 | 98.2 | ||
| KOG0266|consensus | 456 | 98.2 | ||
| PRK10115 | 686 | protease 2; Provisional | 98.19 | |
| PTZ00420 | 568 | coronin; Provisional | 98.19 | |
| TIGR03230 | 442 | lipo_lipase lipoprotein lipase. Members of this pr | 98.18 | |
| PTZ00420 | 568 | coronin; Provisional | 98.18 | |
| PF09752 | 348 | DUF2048: Uncharacterized conserved protein (DUF204 | 98.17 | |
| KOG0286|consensus | 343 | 98.17 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.16 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 98.15 | |
| KOG1553|consensus | 517 | 98.15 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 98.15 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 98.13 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.12 | |
| KOG0305|consensus | 484 | 98.11 | ||
| COG3208 | 244 | GrsT Predicted thioesterase involved in non-riboso | 98.1 | |
| KOG2564|consensus | 343 | 98.1 | ||
| TIGR01839 | 560 | PHA_synth_II poly(R)-hydroxyalkanoic acid synthase | 98.1 | |
| KOG0318|consensus | 603 | 98.05 | ||
| PTZ00421 | 493 | coronin; Provisional | 98.03 | |
| KOG1407|consensus | 313 | 98.02 | ||
| COG3571 | 213 | Predicted hydrolase of the alpha/beta-hydrolase fo | 98.01 | |
| KOG0315|consensus | 311 | 97.99 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.99 | |
| PF02273 | 294 | Acyl_transf_2: Acyl transferase; InterPro: IPR0031 | 97.98 | |
| KOG0772|consensus | 641 | 97.97 | ||
| KOG2139|consensus | 445 | 97.95 | ||
| COG2021 | 368 | MET2 Homoserine acetyltransferase [Amino acid tran | 97.94 | |
| PF05677 | 365 | DUF818: Chlamydia CHLPS protein (DUF818); InterPro | 97.94 | |
| KOG1516|consensus | 545 | 97.93 | ||
| KOG0291|consensus | 893 | 97.93 | ||
| PF03959 | 212 | FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 | 97.92 | |
| KOG2055|consensus | 514 | 97.91 | ||
| KOG2096|consensus | 420 | 97.89 | ||
| KOG0296|consensus | 399 | 97.84 | ||
| KOG0772|consensus | 641 | 97.84 | ||
| KOG0275|consensus | 508 | 97.84 | ||
| KOG0291|consensus | 893 | 97.83 | ||
| KOG3847|consensus | 399 | 97.83 | ||
| KOG0272|consensus | 459 | 97.83 | ||
| KOG4497|consensus | 447 | 97.82 | ||
| COG3545 | 181 | Predicted esterase of the alpha/beta hydrolase fol | 97.8 | |
| KOG1446|consensus | 311 | 97.79 | ||
| KOG0271|consensus | 480 | 97.78 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 97.78 | |
| KOG0279|consensus | 315 | 97.77 | ||
| KOG0263|consensus | 707 | 97.77 | ||
| KOG0286|consensus | 343 | 97.76 | ||
| KOG0973|consensus | 942 | 97.75 | ||
| KOG2382|consensus | 315 | 97.75 | ||
| TIGR03502 | 792 | lipase_Pla1_cef extracellular lipase, Pla-1/cef fa | 97.74 | |
| PF11144 | 403 | DUF2920: Protein of unknown function (DUF2920); In | 97.72 | |
| KOG2055|consensus | 514 | 97.67 | ||
| PF11339 | 581 | DUF3141: Protein of unknown function (DUF3141); In | 97.65 | |
| KOG0272|consensus | 459 | 97.62 | ||
| KOG1446|consensus | 311 | 97.6 | ||
| PRK04940 | 180 | hypothetical protein; Provisional | 97.55 | |
| KOG0306|consensus | 888 | 97.54 | ||
| PF05577 | 434 | Peptidase_S28: Serine carboxypeptidase S28; InterP | 97.53 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.52 | |
| KOG0263|consensus | 707 | 97.47 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.45 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.44 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.41 | |
| COG0596 | 282 | MhpC Predicted hydrolases or acyltransferases (alp | 97.4 | |
| KOG0645|consensus | 312 | 97.4 | ||
| KOG4497|consensus | 447 | 97.39 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 97.39 | |
| KOG1273|consensus | 405 | 97.38 | ||
| KOG0310|consensus | 487 | 97.37 | ||
| KOG0305|consensus | 484 | 97.35 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 97.34 | |
| PF06057 | 192 | VirJ: Bacterial virulence protein (VirJ); InterPro | 97.31 | |
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 97.3 | |
| KOG2048|consensus | 691 | 97.29 | ||
| KOG1407|consensus | 313 | 97.25 | ||
| COG4947 | 227 | Uncharacterized protein conserved in bacteria [Fun | 97.24 | |
| KOG3253|consensus | 784 | 97.22 | ||
| KOG0289|consensus | 506 | 97.21 | ||
| KOG2314|consensus | 698 | 97.19 | ||
| KOG4389|consensus | 601 | 97.18 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.15 | |
| KOG2315|consensus | 566 | 97.12 | ||
| KOG0296|consensus | 399 | 97.1 | ||
| COG1073 | 299 | Hydrolases of the alpha/beta superfamily [General | 97.08 | |
| KOG1273|consensus | 405 | 97.08 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 97.07 | |
| KOG1274|consensus | 933 | 97.03 | ||
| KOG0282|consensus | 503 | 97.02 | ||
| KOG1445|consensus | 1012 | 97.0 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.96 | |
| KOG0295|consensus | 406 | 96.96 | ||
| KOG2551|consensus | 230 | 96.93 | ||
| PF00151 | 331 | Lipase: Lipase; InterPro: IPR013818 Triglyceride l | 96.92 | |
| KOG0273|consensus | 524 | 96.91 | ||
| KOG1274|consensus | 933 | 96.91 | ||
| KOG0643|consensus | 327 | 96.9 | ||
| KOG2096|consensus | 420 | 96.86 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 96.85 | |
| PF10142 | 367 | PhoPQ_related: PhoPQ-activated pathogenicity-relat | 96.82 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 96.82 | |
| KOG0316|consensus | 307 | 96.8 | ||
| TIGR02171 | 912 | Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou | 96.8 | |
| TIGR01849 | 406 | PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, | 96.77 | |
| KOG2315|consensus | 566 | 96.73 | ||
| PF10230 | 266 | DUF2305: Uncharacterised conserved protein (DUF230 | 96.7 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 96.69 | |
| PLN02733 | 440 | phosphatidylcholine-sterol O-acyltransferase | 96.68 | |
| PF12146 | 79 | Hydrolase_4: Putative lysophospholipase; InterPro: | 96.68 | |
| COG3243 | 445 | PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid me | 96.66 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.65 | |
| KOG0289|consensus | 506 | 96.61 | ||
| PTZ00472 | 462 | serine carboxypeptidase (CBP1); Provisional | 96.57 | |
| KOG1063|consensus | 764 | 96.56 | ||
| PF07819 | 225 | PGAP1: PGAP1-like protein; InterPro: IPR012908 The | 96.56 | |
| KOG0299|consensus | 479 | 96.54 | ||
| KOG2394|consensus | 636 | 96.51 | ||
| KOG0275|consensus | 508 | 96.47 | ||
| KOG0643|consensus | 327 | 96.43 | ||
| KOG4378|consensus | 673 | 96.43 | ||
| COG1506 | 620 | DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept | 96.4 | |
| KOG0650|consensus | 733 | 96.39 | ||
| KOG0265|consensus | 338 | 96.37 | ||
| KOG2237|consensus | 712 | 96.37 | ||
| KOG0307|consensus | 1049 | 96.37 | ||
| KOG1445|consensus | 1012 | 96.33 | ||
| COG1770 | 682 | PtrB Protease II [Amino acid transport and metabol | 96.32 | |
| PF06028 | 255 | DUF915: Alpha/beta hydrolase of unknown function ( | 96.28 | |
| KOG0283|consensus | 712 | 96.25 | ||
| KOG0639|consensus | 705 | 96.23 | ||
| KOG0273|consensus | 524 | 96.22 | ||
| KOG0973|consensus | 942 | 96.21 | ||
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 96.2 | |
| KOG0278|consensus | 334 | 96.2 | ||
| PF07519 | 474 | Tannase: Tannase and feruloyl esterase; InterPro: | 96.19 | |
| KOG3967|consensus | 297 | 96.18 | ||
| KOG4840|consensus | 299 | 96.15 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 96.12 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 96.11 | |
| KOG2183|consensus | 492 | 96.06 | ||
| KOG2106|consensus | 626 | 96.04 | ||
| COG3150 | 191 | Predicted esterase [General function prediction on | 96.03 | |
| KOG2048|consensus | 691 | 95.99 | ||
| KOG0319|consensus | 775 | 95.94 | ||
| KOG2139|consensus | 445 | 95.93 | ||
| KOG0265|consensus | 338 | 95.82 | ||
| KOG0284|consensus | 464 | 95.7 | ||
| KOG0646|consensus | 476 | 95.64 | ||
| KOG0771|consensus | 398 | 95.62 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 95.61 | |
| KOG0640|consensus | 430 | 95.58 | ||
| KOG2394|consensus | 636 | 95.5 | ||
| KOG2919|consensus | 406 | 95.42 | ||
| KOG0268|consensus | 433 | 95.41 | ||
| KOG0277|consensus | 311 | 95.36 | ||
| KOG2931|consensus | 326 | 95.33 | ||
| PF00450 | 415 | Peptidase_S10: Serine carboxypeptidase; InterPro: | 95.33 | |
| KOG4499|consensus | 310 | 95.29 | ||
| KOG1538|consensus | 1081 | 95.28 | ||
| KOG0771|consensus | 398 | 95.26 | ||
| PF01674 | 219 | Lipase_2: Lipase (class 2); InterPro: IPR002918 Li | 95.21 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 95.15 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 95.14 | |
| PF05990 | 233 | DUF900: Alpha/beta hydrolase of unknown function ( | 95.13 | |
| KOG1539|consensus | 910 | 95.1 | ||
| PF00975 | 229 | Thioesterase: Thioesterase domain; InterPro: IPR00 | 95.08 | |
| KOG0645|consensus | 312 | 94.96 | ||
| KOG0295|consensus | 406 | 94.89 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 94.88 | |
| KOG2919|consensus | 406 | 94.8 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 94.8 | |
| PF08386 | 103 | Abhydrolase_4: TAP-like protein; InterPro: IPR0135 | 94.78 | |
| KOG1524|consensus | 737 | 94.77 | ||
| PF07082 | 250 | DUF1350: Protein of unknown function (DUF1350); In | 94.63 | |
| KOG1539|consensus | 910 | 94.56 | ||
| KOG0302|consensus | 440 | 94.53 | ||
| KOG0307|consensus | 1049 | 94.48 | ||
| KOG0319|consensus | 775 | 94.46 | ||
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 94.32 | |
| KOG0303|consensus | 472 | 94.31 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 94.24 | |
| KOG1009|consensus | 434 | 94.17 | ||
| PF05705 | 240 | DUF829: Eukaryotic protein of unknown function (DU | 94.11 | |
| KOG0639|consensus | 705 | 94.1 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 94.09 | |
| KOG2110|consensus | 391 | 94.05 | ||
| KOG0278|consensus | 334 | 94.04 | ||
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 93.97 | |
| KOG0282|consensus | 503 | 93.89 | ||
| KOG0641|consensus | 350 | 93.88 | ||
| PF03096 | 283 | Ndr: Ndr family; InterPro: IPR004142 This family c | 93.84 | |
| KOG0285|consensus | 460 | 93.79 | ||
| KOG0310|consensus | 487 | 93.66 | ||
| KOG0302|consensus | 440 | 93.64 | ||
| KOG0316|consensus | 307 | 93.6 | ||
| KOG0303|consensus | 472 | 93.55 | ||
| KOG4328|consensus | 498 | 93.54 | ||
| KOG4283|consensus | 397 | 93.45 | ||
| KOG0647|consensus | 347 | 93.44 | ||
| KOG0313|consensus | 423 | 93.26 | ||
| KOG4388|consensus | 880 | 93.25 | ||
| KOG0640|consensus | 430 | 93.17 | ||
| KOG0288|consensus | 459 | 93.13 | ||
| KOG0288|consensus | 459 | 92.92 | ||
| KOG2100|consensus | 755 | 92.82 | ||
| PF04083 | 63 | Abhydro_lipase: Partial alpha/beta-hydrolase lipas | 92.69 | |
| PLN02209 | 437 | serine carboxypeptidase | 92.63 | |
| KOG0277|consensus | 311 | 92.54 | ||
| PF11187 | 224 | DUF2974: Protein of unknown function (DUF2974); In | 92.52 | |
| KOG0264|consensus | 422 | 92.51 | ||
| COG4814 | 288 | Uncharacterized protein with an alpha/beta hydrola | 92.49 | |
| KOG1408|consensus | 1080 | 92.49 | ||
| PF02089 | 279 | Palm_thioest: Palmitoyl protein thioesterase; Inte | 92.37 | |
| KOG1009|consensus | 434 | 92.34 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 92.32 | |
| KOG2321|consensus | 703 | 92.3 | ||
| KOG2182|consensus | 514 | 92.26 | ||
| KOG0283|consensus | 712 | 92.21 | ||
| KOG0284|consensus | 464 | 92.17 | ||
| KOG0294|consensus | 362 | 92.16 | ||
| PLN03016 | 433 | sinapoylglucose-malate O-sinapoyltransferase | 92.12 | |
| KOG2110|consensus | 391 | 91.84 | ||
| PF05057 | 217 | DUF676: Putative serine esterase (DUF676); InterPr | 91.73 | |
| KOG0649|consensus | 325 | 91.66 | ||
| PF12048 | 310 | DUF3530: Protein of unknown function (DUF3530); In | 91.43 | |
| KOG2565|consensus | 469 | 91.39 | ||
| KOG1920|consensus | 1265 | 91.16 | ||
| PRK13613 | 599 | lipoprotein LpqB; Provisional | 91.0 | |
| COG4782 | 377 | Uncharacterized protein conserved in bacteria [Fun | 90.79 | |
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 90.42 | |
| KOG4378|consensus | 673 | 90.26 | ||
| KOG0294|consensus | 362 | 90.25 | ||
| KOG0306|consensus | 888 | 90.09 | ||
| KOG4283|consensus | 397 | 89.82 | ||
| KOG0290|consensus | 364 | 89.67 | ||
| PF02450 | 389 | LCAT: Lecithin:cholesterol acyltransferase; InterP | 89.58 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 89.49 | |
| KOG3975|consensus | 301 | 89.41 | ||
| COG3319 | 257 | Thioesterase domains of type I polyketide synthase | 89.21 | |
| PRK10252 | 1296 | entF enterobactin synthase subunit F; Provisional | 89.21 | |
| KOG0269|consensus | 839 | 89.0 | ||
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 88.84 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 88.54 | |
| KOG1007|consensus | 370 | 88.32 | ||
| KOG4499|consensus | 310 | 88.2 | ||
| PF01764 | 140 | Lipase_3: Lipase (class 3); InterPro: IPR002921 Tr | 87.84 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 87.7 | |
| PF11288 | 207 | DUF3089: Protein of unknown function (DUF3089); In | 87.68 | |
| KOG1963|consensus | 792 | 87.54 | ||
| KOG1282|consensus | 454 | 87.41 | ||
| PRK13614 | 573 | lipoprotein LpqB; Provisional | 87.38 | |
| KOG1036|consensus | 323 | 87.01 | ||
| KOG0292|consensus | 1202 | 86.66 | ||
| COG1075 | 336 | LipA Predicted acetyltransferases and hydrolases w | 86.58 | |
| KOG2541|consensus | 296 | 85.87 | ||
| KOG0646|consensus | 476 | 85.78 | ||
| KOG0290|consensus | 364 | 85.29 | ||
| cd00741 | 153 | Lipase Lipase. Lipases are esterases that can hydr | 85.16 | |
| KOG0267|consensus | 825 | 84.64 | ||
| KOG1524|consensus | 737 | 84.62 | ||
| KOG4328|consensus | 498 | 84.45 | ||
| KOG1523|consensus | 361 | 84.18 | ||
| PF03283 | 361 | PAE: Pectinacetylesterase | 83.95 | |
| KOG0313|consensus | 423 | 83.86 | ||
| KOG1523|consensus | 361 | 83.69 | ||
| KOG1034|consensus | 385 | 83.15 | ||
| KOG0269|consensus | 839 | 82.99 | ||
| KOG0264|consensus | 422 | 82.68 | ||
| KOG3724|consensus | 973 | 82.45 | ||
| KOG1920|consensus | 1265 | 81.86 | ||
| PLN02454 | 414 | triacylglycerol lipase | 81.56 | |
| PF06259 | 177 | Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR | 81.45 | |
| PLN02633 | 314 | palmitoyl protein thioesterase family protein | 81.29 | |
| PRK13615 | 557 | lipoprotein LpqB; Provisional | 81.24 | |
| KOG0281|consensus | 499 | 81.02 | ||
| KOG1007|consensus | 370 | 80.62 | ||
| PLN02517 | 642 | phosphatidylcholine-sterol O-acyltransferase | 80.51 | |
| KOG1230|consensus | 521 | 80.22 |
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-109 Score=890.27 Aligned_cols=650 Identities=28% Similarity=0.470 Sum_probs=584.9
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCC--ChHHHHHHHHhhhhhHhHhcCC-ccHHHHHHHHHHhhhccccCCC
Q psy2521 53 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPH--CAETQIFNFMQNNISNPYCQNH-SDREAIKEQLLRMANYEKYSAP 129 (783)
Q Consensus 53 ~~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~--~~ev~~~~~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~ 129 (783)
.+.+|.|+|.|+. .+.||.++.|+|+||+|++ +|+|++||+|||+|+++.|+++ ++++.|
T Consensus 3 ~p~pP~a~k~~~~-~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~i---------------- 65 (682)
T COG1770 3 LPLPPIAKKVPTT-RTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKI---------------- 65 (682)
T ss_pred CCCCCCcccccee-eeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHH----------------
Confidence 3568999999955 8999999999999999998 9999999999999999999999 888888
Q ss_pred CCCCCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCC-eEEEeCCCCcCCC-C
Q psy2521 130 HFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGS-TEVFLDPNKLSKD-G 207 (783)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~-~~~llD~n~~~~~-g 207 (783)
|+||+.||++ ++.|+|.++|+++||.|...+.++++.||+...++. +++|||+|+++++ .
T Consensus 66 --------------f~Ei~~Rik~----dd~Svp~~~~~~~Yy~r~~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~ 127 (682)
T COG1770 66 --------------FEEIKGRIKE----DDLSVPYRKGPYEYYSRTEEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHD 127 (682)
T ss_pred --------------HHHHhhhccC----cCCCCccccCCeeEEEEecCCCcceeEEeccCCCCCceeEeecchhccCccc
Confidence 9999999999 899999999999999999998998888885543444 8999999999988 6
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.++++++++|||+++|||+.+..|+++++|+++|++||+.+++.+.++. .+++|++|+++|||++.++
T Consensus 128 f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~~~~-~~~~Wa~d~~~lfYt~~d~----------- 195 (682)
T COG1770 128 FFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEITNTS-GSFAWAADGKTLFYTRLDE----------- 195 (682)
T ss_pred ceeeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhcccc-cceEEecCCCeEEEEEEcC-----------
Confidence 8999999999999999999999999999999999999999998888764 7899999999999999765
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..++.+||+|.+|+++.++.+||++++. .|++++..|.+.+||++..++ ..++++++++.+.. ...+. ++
T Consensus 196 ~~rp~kv~~h~~gt~~~~d~lvyeE~d~-~f~~~v~~s~s~~yi~i~~~~-~~tsE~~ll~a~~p-------~~~p~-vv 265 (682)
T COG1770 196 NHRPDKVWRHRLGTPGSSDELVYEEKDD-RFFLSVGRSRSEAYIVISLGS-HITSEVRLLDADDP-------EAEPK-VV 265 (682)
T ss_pred CCCcceEEEEecCCCCCcceEEEEcCCC-cEEEEeeeccCCceEEEEcCC-CcceeEEEEecCCC-------CCceE-EE
Confidence 4589999999999998999999999885 588999999999999998865 34589999999872 11122 33
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
..+..+.. ...+.|+.+|+.+|.++.+++|++..+ .+.+++|+++|++.++..+.++..++ ++|++..+++|.++|+
T Consensus 266 ~pr~~g~eY~~eh~~d~f~i~sN~~gknf~l~~ap~-~~~~~~w~~~I~h~~~~~l~~~~~f~-~~lVl~eR~~glp~v~ 343 (682)
T COG1770 266 LPRENGVEYSVEHGGDRFYILSNADGKNFKLVRAPV-SADKSNWRELIPHREDVRLEGVDLFA-DHLVLLERQEGLPRVV 343 (682)
T ss_pred EEcCCCcEEeeeecCcEEEEEecCCCcceEEEEccC-CCChhcCeeeeccCCCceeeeeeeec-cEEEEEecccCCceEE
Confidence 33444444 477889999999999999999999999 66677899999999999999999998 9999999999999999
Q ss_pred EEECCCCceeeeecCC--CeEE-EeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCC-CCCC
Q psy2521 447 LHDLNTGKRLHSFPLD--LGQI-THISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPE-FEPT 522 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~--~g~v-~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~-~~~~ 522 (783)
+.+..+|+. +.|.++ .++. .+.+..++.+.++|+++|+++|.++|.+|+ +++ +.++++++.+++ |+++
T Consensus 344 v~~~~~~~~-~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm-----~t~--er~~LkqqeV~~g~dp~ 415 (682)
T COG1770 344 VRDRKTGEE-RGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDM-----ATG--ERTLLKQQEVPGGFDPE 415 (682)
T ss_pred EEecCCCce-eeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeec-----cCC--cEEEEEeccCCCCCChh
Confidence 999987876 567776 2332 134455678999999999999999999999 688 899999999986 9999
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
+|+++++|+++.||++||++|+++++.+.++++|+|||+||+||+++.+.|+..++++|++ |++++++|+||||+.|+.
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRA 494 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChH
Confidence 9999999999999999999999999988899999999999999999999999999999985 999999999999999999
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-----
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----- 677 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~----- 677 (783)
|+++|+..+|+|+|+||++|+++|+++|++++++|+++|+|+||+|++++++++|++|+++|+.|||+|++..+.
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc
Q psy2521 678 FTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757 (783)
Q Consensus 678 ~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 757 (783)
+|. ..| .|||||.+++.+++|++||||.||+. ..||++|+++|.+|+||.+||+.|++|+|++. ++++.|
T Consensus 575 LT~-~E~-~EWGNP~d~e~y~yikSYSPYdNV~a----~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~----~td~~p 644 (682)
T COG1770 575 LTV-TEW-DEWGNPLDPEYYDYIKSYSPYDNVEA----QPYPAILVTTGLNDPRVQYWEPAKWVAKLREL----KTDGNP 644 (682)
T ss_pred CCc-cch-hhhCCcCCHHHHHHHhhcCchhcccc----CCCCceEEEccccCCccccchHHHHHHHHhhc----ccCCCc
Confidence 222 234 79999999999999999999999998 69999999999999999999999999999999 788999
Q ss_pred EEEEEeCCCCccCCccchhhhhc
Q psy2521 758 LLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 758 ~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
++|++.+++|||.....-+..++
T Consensus 645 lLlkt~M~aGHgG~SgRf~~lee 667 (682)
T COG1770 645 LLLKTNMDAGHGGASGRFQRLEE 667 (682)
T ss_pred EEEEecccccCCCCCCchHHHHH
Confidence 99999999999986655554443
|
|
| >KOG2237|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-109 Score=879.18 Aligned_cols=687 Identities=37% Similarity=0.647 Sum_probs=602.1
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCC
Q psy2521 53 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFG 132 (783)
Q Consensus 53 ~~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 132 (783)
+..||+++|+..+++++||++|.||||||||.++.++.+||++||.||+++|++.+.+++|
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d~~~~~~fv~~en~~t~~vl~~~e~~~kl------------------- 63 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPDDTEMKEFVEAENKYTDAVLEDTETKEKL------------------- 63 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCcHHHHHHHHHHhhhhhHHHHhccHHHHHH-------------------
Confidence 4679999999889999999999999999999999999999999999999999999777788
Q ss_pred CCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEe
Q psy2521 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALK 212 (783)
Q Consensus 133 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~ 212 (783)
+.||+. +++|+++++|.++|+||||.++.+++ |+++|+|+....++++++|+|.++.++++.+.
T Consensus 64 -----------~~em~~----~i~ye~~~~p~r~G~~yyY~~n~~lk-q~vl~~rr~~~~e~~~~ld~~~~~dd~tV~Ld 127 (712)
T KOG2237|consen 64 -----------FSEMTK----RIDYEIITPPLRWGPWYYYFYNTGLK-QYVLYCRRLLEKEEEVFLDPNALGDDGTVLLD 127 (712)
T ss_pred -----------HHHhhh----ccCccccCCccccCCEEEEEEcCCce-ehhHHHHhhhhcccceecCCccCCCCceEEec
Confidence 444454 55669999999999999999999999 78787777667889999999999999999999
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCC--CCCCcccccC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGT--ADGTETTAHM 290 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~--~~g~~~~~~~ 290 (783)
.-++|-|++|++|.++..|.||..|-....+.|+...+.+.+.+++.++|.+|+++++|.+....+|. -.++++..++
T Consensus 128 ~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~v~~~~~~~~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r 207 (712)
T KOG2237|consen 128 TNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTVVIDVKFSGPVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNR 207 (712)
T ss_pred hhhhhhcCCceEEeecccCCCceEEEEEEcCCCCccceeeeeeccCCceeeccCCceEeeeecccCCceeeeeeeccccC
Confidence 99999999999999999999999998888888888777788888899999999999999998764443 2455667899
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC-cEEEEEECCCCCCCcccC-CCCceeeec
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGKISG-KFPLKTVIP 368 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~-~~l~~~dl~~g~~~~l~~-~~~~~~l~~ 368 (783)
+++||+|.+|+.|.+|++++++++++.+......+.+|++++.+.+++.+. +.+|++|+... ...+.. -.++..++.
T Consensus 208 ~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~-~~gl~~~~~~~v~~v~ 286 (712)
T KOG2237|consen 208 PHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSP-SDGLELLILPRVKGVD 286 (712)
T ss_pred cceEEEEecccCCCcceEEEecCCCCeEEEEEEEecCceEEEEEeeccCCccceEEEEecccc-cCCcchheeeccchhh
Confidence 999999999999999999999999987766666677777777666665553 89999999762 222221 223333444
Q ss_pred CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 369 GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 369 ~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
.+...+.++..++..++|.+|.+++++.+.++++..+....|++++++.+..+++.+...+++.+++.+..+....+.+.
T Consensus 287 ~f~eh~~fi~~~~t~~~~~tn~~~p~y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~ 366 (712)
T KOG2237|consen 287 CFVEHYDFITNEGTEFYFLTNKDAPNYYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVR 366 (712)
T ss_pred hhhhhhhheeccCcceeeeccCCCCceeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhcccc
Confidence 44444457888899999999999999999999998876778999999998889999988888889999998887777777
Q ss_pred ECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccC--CCCCCCCCeE
Q psy2521 449 DLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIV--PEFEPTLFQT 526 (783)
Q Consensus 449 dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~--~~~~~~~~~~ 526 (783)
++.+|..++.+++|.|++.+++++.+.+.++|.++|+.+|+.+|.||+ ..+..+..++++... ++|+.+.|++
T Consensus 367 ~~l~g~~~~~fpLpv~sv~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl-----~~~~~e~~vf~e~~~~lpg~~~s~y~~ 441 (712)
T KOG2237|consen 367 DLLDGSLLRSFPLPVGSVSGTSGDFKSSTIRFQFSSFLTPGSIYDYDL-----ANGKPEPSVFREITVVLPGFDASDYVV 441 (712)
T ss_pred ccccCceeeeecCCCCcccccccCCCCceEEEEEeccCCCCeEEEeec-----cCCCCCCcceeeeccccCcccccceEE
Confidence 777888889999999999888888889999999999999999999999 466556677777665 7899999999
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
+++++.|+||++|||+|++.++.+.+++.|.+||+||||+++++|.|..+++.++. +|++++.+|+|||||||+.||+.
T Consensus 442 ~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~ 520 (712)
T KOG2237|consen 442 ERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKD 520 (712)
T ss_pred EEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhc
Confidence 99999999999999999999998889999999999999999999999999988887 69999999999999999999999
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchh
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSES 686 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~ 686 (783)
|++.+|+|.|+||++|++||+++||+.|+|+++.|+|+||+|++++++|+||||+|+|+.+||+||++++.+++++.|..
T Consensus 521 G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~s 600 (712)
T KOG2237|consen 521 GRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTS 600 (712)
T ss_pred cchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC
Q psy2521 687 EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDA 766 (783)
Q Consensus 687 ~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~ 766 (783)
+||...+++.++.+..++||++++.+++..+||.+||++++||+||+++|+.||+|+||...+......+|+++++.+++
T Consensus 601 d~ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~a 680 (712)
T KOG2237|consen 601 DYEEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKA 680 (712)
T ss_pred hhcccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCC
Confidence 88766666666666666666666555434679999999999999999999999999999986654444689999999999
Q ss_pred CccCCccchhhhhcc
Q psy2521 767 GHGQGKALDIELKNP 781 (783)
Q Consensus 767 gHg~~~~~~~~~~~~ 781 (783)
||+..+++.++++|.
T Consensus 681 gH~~~~~~~k~~~E~ 695 (712)
T KOG2237|consen 681 GHGAEKPRFKQIEEA 695 (712)
T ss_pred ccccCCchHHHHHHH
Confidence 999999999998874
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-100 Score=881.39 Aligned_cols=649 Identities=24% Similarity=0.431 Sum_probs=545.0
Q ss_pred CCCCccCCceeccccCceecCCCcccCCC--CChHHHHHHHHhhhhhHhHhcCC-ccHHHHHHHHHHhhhccccCCCCCC
Q psy2521 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYP--HCAETQIFNFMQNNISNPYCQNH-SDREAIKEQLLRMANYEKYSAPHFG 132 (783)
Q Consensus 56 ~P~~~~~~~~~~~~hg~~~~Dpy~WLed~--~~~ev~~~~~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~ 132 (783)
+|.++|+|+ ++++||+++.|||+||||. ++|+|++||++||+||+++|+++ ++|++|
T Consensus 2 pP~a~~~~~-~~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l------------------- 61 (686)
T PRK10115 2 LPKAARIPH-AMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRI------------------- 61 (686)
T ss_pred cCCCCCCCe-eEEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHH-------------------
Confidence 688899994 5999999999999999996 59999999999999999999996 899999
Q ss_pred CCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCC-C---CCeEEEeCCCCcCCC-C
Q psy2521 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNL-T---GSTEVFLDPNKLSKD-G 207 (783)
Q Consensus 133 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~-~---g~~~~llD~n~~~~~-g 207 (783)
++||++|+.. +++++|.+.|+++||.++..+. +..||+|... + +.+++|||+|+++++ +
T Consensus 62 -----------~~~~~~~~~~----~~~~~p~~~g~~~y~~~~~~g~-~~~~~~r~~~~~~~~~~~~~llD~n~~a~~~~ 125 (686)
T PRK10115 62 -----------LKEIIDRIPQ----REVSAPYIKNGYRYRHIYEPGC-EYAIYQRQSAFSEEWDEWETLLDANKRAAHSE 125 (686)
T ss_pred -----------HHHHHhhccc----ccCCCCEEECCEEEEEEEcCCC-ccEEEEEecCCCCCCCCCEEEEcchhhccCCC
Confidence 5566665554 8999999999998888876655 4666665532 2 457999999999655 6
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+++++++.|||||++|||+.+.+|+|+++|+++|+++|+.+++.+.+++ ..++|++|+++|+|++.++.
T Consensus 126 ~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~~~~~~---------- 194 (686)
T PRK10115 126 FYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE-PSFVWANDSWTFYYVRKHPV---------- 194 (686)
T ss_pred cEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc-eEEEEeeCCCEEEEEEecCC----------
Confidence 8999999999999999999999999999999999999998877777776 56999999999999997431
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..++.+||+|++||++.++++|++++++. +.+....|.|++++++.+... ..++++++++... . ..++..+.
T Consensus 195 ~~~~~~v~~h~lgt~~~~d~lv~~e~~~~-~~~~~~~s~d~~~l~i~~~~~-~~~~~~l~~~~~~-~-----~~~~~~~~ 266 (686)
T PRK10115 195 TLLPYQVWRHTIGTPASQDELVYEEKDDT-FYVSLHKTTSKHYVVIHLASA-TTSEVLLLDAELA-D-----AEPFVFLP 266 (686)
T ss_pred CCCCCEEEEEECCCChhHCeEEEeeCCCC-EEEEEEEcCCCCEEEEEEECC-ccccEEEEECcCC-C-----CCceEEEE
Confidence 24678999999999988999999987754 445666777999998776654 4478888885431 0 11122222
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
......+. +.+.++.||+.+|.++++++|+.+++.+. .+|+.++++.+...++.+.+.. ++|++...+++.++|++
T Consensus 267 ~~~~~~~~-~~~~~~~ly~~tn~~~~~~~l~~~~~~~~--~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~ 342 (686)
T PRK10115 267 RRKDHEYS-LDHYQHRFYLRSNRHGKNFGLYRTRVRDE--QQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQ 342 (686)
T ss_pred CCCCCEEE-EEeCCCEEEEEEcCCCCCceEEEecCCCc--ccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEE
Confidence 33333333 44667899999999999999999998753 3599999997666788888875 89999999999999999
Q ss_pred EECCCCceeeeecCC-CeEEEe--eeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCC
Q psy2521 448 HDLNTGKRLHSFPLD-LGQITH--ISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF 524 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~-~g~v~~--~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~ 524 (783)
+++. ++.++.|+++ .+.+.. .+.+++++.+++.++|+++|+++|.+|+ .++ +.++++....+.+++..+
T Consensus 343 ~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~-----~~~--~~~~l~~~~~~~~~~~~~ 414 (686)
T PRK10115 343 INRK-TREVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDM-----DTG--ERRVLKQTEVPGFDAANY 414 (686)
T ss_pred EcCC-CCceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEEC-----CCC--cEEEEEecCCCCcCcccc
Confidence 9984 4445667643 222333 3334667889999999999999999999 566 677888776667888889
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
.++++++++.||++||++++++++...+++.|+||++||||+.+..+.|+..++.|++ +||+|+++|+|||||||++|+
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD-RGFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH-CCcEEEEEEcCCCCccCHHHH
Confidence 9999999999999999999988876556788999999999999999999999887776 699999999999999999999
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc---ccccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN---KFTIA 681 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~---~~~~~ 681 (783)
++|+..+|.++|+||++|++||+++|++||+||+|+|+|+||+|++++++++|++|+|+|+.+|++||++++ .+...
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~ 573 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLT 573 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999875 22334
Q ss_pred ccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 682 YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 682 ~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
..|..+||+|.+++.+++|+++||++||++ ++||++||+||.+|+|||++|+.||+++||+. +....+++++
T Consensus 574 ~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~----~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~----~~~~~~vl~~ 645 (686)
T PRK10115 574 TGEFEEWGNPQDPQYYEYMKSYSPYDNVTA----QAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL----KTDDHLLLLC 645 (686)
T ss_pred hhHHHHhCCCCCHHHHHHHHHcCchhccCc----cCCCceeEEecCCCCCcCchHHHHHHHHHHhc----CCCCceEEEE
Confidence 456789999998889999999999999998 79999999999999999999999999999998 3334557777
Q ss_pred EeCCCCccCCccchhhhhc
Q psy2521 762 VEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 762 ~~~~~gHg~~~~~~~~~~~ 780 (783)
+.+++|||......+.+++
T Consensus 646 ~~~~~GHg~~~~r~~~~~~ 664 (686)
T PRK10115 646 TDMDSGHGGKSGRFKSYEG 664 (686)
T ss_pred ecCCCCCCCCcCHHHHHHH
Confidence 7799999987766666554
|
|
| >COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-97 Score=788.06 Aligned_cols=622 Identities=34% Similarity=0.557 Sum_probs=524.2
Q ss_pred ecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCCCCCCccCCCCcHHHHHHHHHh
Q psy2521 74 IKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLR 153 (783)
Q Consensus 74 ~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 153 (783)
++|||+||||.+++|+++|+++||+.|.++|...+.|+.+ ++|+.+
T Consensus 2 ~~DPy~wlEd~~~~eal~wv~~~N~~t~~~L~~~~~~a~~----------------------------------~~~~~~ 47 (648)
T COG1505 2 VPDPYRWLEDLDSAEALKWVEAQNAKTREFLGEDSARAAS----------------------------------DKRLLE 47 (648)
T ss_pred CCCcchhhhcCCcHHHHHHHHhhhhHHHHHhhcchhhHHH----------------------------------HHHHHH
Confidence 5899999999999999999999999999999999988888 899999
Q ss_pred hcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCC------CCCeEEEeCCCCcCCCC--cEEEeeEEECCCCcEEEE
Q psy2521 154 MANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNL------TGSTEVFLDPNKLSKDG--TTALKLYAFSDNGKHFAY 225 (783)
Q Consensus 154 ~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~------~g~~~~llD~n~~~~~g--~~~l~~~~~SPDG~~la~ 225 (783)
+|++++.+.|+..|+++|..+++. ++...+||+... .++|++|+|+++++++. ++.+++.+.+||+++++|
T Consensus 48 l~d~~~~~~~~~~~~~~ynFw~D~-~~p~Glwr~ttl~syrs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~ 126 (648)
T COG1505 48 LWDYEDIPIPFERGGRYYNFWQDA-LYPRGLYRRTTLETYRSAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLY 126 (648)
T ss_pred HhhccccCcceeccceeEEeeccc-cCcceeEEeecceeecccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEE
Confidence 999999999999999999999876 566788888643 57899999999999773 799999999999999999
Q ss_pred EEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc---eEEEEEcCCC
Q psy2521 226 CLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ---KIYYHVLGTE 302 (783)
Q Consensus 226 ~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~---~v~~~~lgt~ 302 (783)
+.+.+|+|+..++++|++||+.+.+. +..+.++.|..++ +++|++...+ +..+.+..+. .++++++.+.
T Consensus 127 s~S~gG~D~~~~re~Dlet~~fv~~~--~f~~~~~~wld~d-~~~~~~~~~~-----~e~T~sGy~~~~~~~krg~~f~~ 198 (648)
T COG1505 127 SLSIGGSDAGITREFDLETGEFVEEE--GFKFPGISWLDDD-GVFVSRYWRP-----KEKTPSGYPRVVKRLKRGKLFEG 198 (648)
T ss_pred EecCCCCcceEEEEEEecccccccCC--CccccceEEecCC-CEEEecccCC-----cccCccCCchHhhhhhhcccccC
Confidence 99999999999999999999887654 4444569998776 8888886543 2222344443 4566778888
Q ss_pred CCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC-cEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeC
Q psy2521 303 QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNG 381 (783)
Q Consensus 303 ~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~-~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg 381 (783)
+.+|+.|+...+...+.....++.|+++.+...+-..+. ..++ +++-+. ....+..++......+.....+.
T Consensus 199 ~~~dv~V~a~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~-l~~p~~------~~~~~~~l~~~~r~dw~~~~~~~ 271 (648)
T COG1505 199 QEGDVMVNARGDQDPWGFRLVLSEDGDFFMLSLWLGTSGKGLIK-LGLPDK------VGYEWGKLVNTLRADWTFADVDY 271 (648)
T ss_pred CCCceEEecccccCCccceEEEeeccchhhheeeEeccCCCcee-ccCCcc------ccceeeeeeEeecccccccCccc
Confidence 899999988766555666777888888776554433332 3444 333220 01112334433344444333333
Q ss_pred CEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC
Q psy2521 382 PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 461 (783)
Q Consensus 382 ~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~ 461 (783)
..+++.+......++. ...++|+. ...++.+...+ +++++....+..++|.++++ +|...++|++
T Consensus 272 g~l~l~~~e~~~~g~~------------~a~~~P~~-~~~le~v~tt~-~~~va~~l~nv~~~l~v~~~-~g~~~~~v~l 336 (648)
T COG1505 272 GLLYLLTDEDLELGKV------------IAEFIPEE-EQSLEQVVTTK-DKLVAGTLDNVSGRLEVYDL-KGERIEEVEL 336 (648)
T ss_pred ceEEEEehhccccCce------------eEEecCCc-ccceeeeEEEc-CeEEeeeehhccceEEEecc-CceEeeeccc
Confidence 4455544433322211 22455554 78888988888 89999999999999999999 6787788998
Q ss_pred C-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCCeEEEEEEECCCCcEEE
Q psy2521 462 D-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVP 540 (783)
Q Consensus 462 ~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~ 540 (783)
| .|++..++.+.+++++++.++||++|+++|++|+ .++ +.++++++.. .||++++.++|.+.+|+||++||
T Consensus 337 ~~~ga~~~~~~~~~g~ev~l~~t~F~tP~~~~r~~~-----~~~--eLe~ik~~p~-~FDa~~~~veQ~~atSkDGT~IP 408 (648)
T COG1505 337 PPPGALGMGSADKDGDEVFLAFTSFTTPSTLYRLDL-----FGG--ELEVIREQPV-QFDADNYEVEQFFATSKDGTRIP 408 (648)
T ss_pred CCccceeeccCCCCCcEEEEEeecccCCCceEEEec-----CCc--eehhhhhccC-CcCccCceEEEEEEEcCCCcccc
Confidence 8 7888766777888999999999999999999999 455 6777777654 59999999999999999999999
Q ss_pred EEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHH
Q psy2521 541 MYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQ 620 (783)
Q Consensus 541 ~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~ 620 (783)
++|++ |+.+.+ ++|++||+||||+.+.+|.|++.+..||+ +|++++.+|+|||||||++||+++++.++++.|+||+
T Consensus 409 YFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLe-rGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~ 485 (648)
T COG1505 409 YFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLE-RGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFI 485 (648)
T ss_pred EEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHh-cCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHH
Confidence 99999 887777 99999999999999999999999988887 5999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHH
Q psy2521 621 AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNL 700 (783)
Q Consensus 621 a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 700 (783)
|+++.|+++|++.|++|+|+|+|+||+|++++++|+||+|.|+|+.+|++||+||+.++.|..|+.|||+|.+|++++.+
T Consensus 486 AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l 565 (648)
T COG1505 486 AVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFL 565 (648)
T ss_pred HHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 701 LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 701 ~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
.+||||||++. +++|||+||++|.+|+||+|+|++||+++|+++ +.|+.+++..++||+.+.+..+.+++
T Consensus 566 ~~YSPy~nl~~---g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~-------~~pv~~~e~t~gGH~g~~~~~~~A~~ 635 (648)
T COG1505 566 LAYSPYHNLKP---GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV-------GAPVLLREETKGGHGGAAPTAEIARE 635 (648)
T ss_pred HhcCchhcCCc---cccCCCeEEEcccccccccchHHHHHHHHHHhc-------CCceEEEeecCCcccCCCChHHHHHH
Confidence 99999999998 599999999999999999999999999999999 89999999999999999888776665
Q ss_pred c
Q psy2521 781 P 781 (783)
Q Consensus 781 ~ 781 (783)
.
T Consensus 636 ~ 636 (648)
T COG1505 636 L 636 (648)
T ss_pred H
Confidence 3
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-56 Score=493.34 Aligned_cols=405 Identities=34% Similarity=0.583 Sum_probs=325.0
Q ss_pred CCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCC-ccHHHHHHHHHHhhhccccCCCCCCCCC
Q psy2521 57 PKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNH-SDREAIKEQLLRMANYEKYSAPHFGVSN 135 (783)
Q Consensus 57 P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 135 (783)
|.+++.+ +++++||+++.|||+||||.++|+|++||++||+||+++|+++ |++++|
T Consensus 2 ~~~~~~~-~~~~~hg~~~~DpY~WLed~~~~~v~~~~~~en~~t~~~l~~~~~~~~~l---------------------- 58 (414)
T PF02897_consen 2 PTARKPP-VVETLHGVTITDPYRWLEDDDSPEVLAWLKAENAYTEAYLAQLKPLREKL---------------------- 58 (414)
T ss_dssp -TTS-TT-SEEEETTEEEE-TTGGGGSTTSHHHHHHHHHHHHHHHHHHHTSHTCHHHH----------------------
T ss_pred CCCCCCC-eeeecCCCEeecCchhhcCCCCHHHHHHHHHHHHHHHHhhcccCchHHHH----------------------
Confidence 4444555 5599999999999999999999999999999999999999999 999999
Q ss_pred CccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCC--CCC-eEEEeCCCCcCCCC-cEEE
Q psy2521 136 PYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNL--TGS-TEVFLDPNKLSKDG-TTAL 211 (783)
Q Consensus 136 ~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~--~g~-~~~llD~n~~~~~g-~~~l 211 (783)
.++|+++++.+++++|.+.|+++||.++.++++++++||+... ++. +++|||+|++++++ ++.+
T Consensus 59 ------------~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~ 126 (414)
T PF02897_consen 59 ------------YEELKARINEDRESVPVRRGGYYYYSRNQGGKNYPVLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSL 126 (414)
T ss_dssp ------------HHHHHHHCSSSEE---EEETTEEEEEEE-SS-SS-EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEE
T ss_pred ------------HHHHHhhccCCCccccEEECCeEEEEEEcCCCceEEEEEEecccCCCCceEEEEcchHhhccCceEEe
Confidence 5555666677999999999999999999999999999999876 344 59999999999886 7888
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
+.+++||||++|||+++.+|+|+++|+++|+++|+.+.+.+.++.+++++|++||+.|||++.++..... +...+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~-----~~~~~ 201 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTS-----DSGYP 201 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS------CCGCC
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccc-----cCCCC
Confidence 8999999999999999999999999999999999998888888776569999999999999977531100 24558
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
.+||+|++|+++.+|++||++++++.+++++.+|+||++|++.+.++.+.+++|++|+..+. .....+..+.....
T Consensus 202 ~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~----~~~~~~~~l~~~~~ 277 (414)
T PF02897_consen 202 RQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGG----SPDAKPKLLSPRED 277 (414)
T ss_dssp EEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTT----TSS-SEEEEEESSS
T ss_pred cEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccC----CCcCCcEEEeCCCC
Confidence 89999999999999999999988764378999999999999988876444899999998731 01234565665555
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE-EeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK-TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~-~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
+....+.+.|+.||+++|.++++++|++++++.+....|. .++++.+...+..+..++ ++|++.+++++.++|.++++
T Consensus 278 ~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~Lvl~~~~~~~~~l~v~~~ 356 (414)
T PF02897_consen 278 GVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFK-DYLVLSYRENGSSRLRVYDL 356 (414)
T ss_dssp S-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEET-TEEEEEEEETTEEEEEEEET
T ss_pred ceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEEC-CEEEEEEEECCccEEEEEEC
Confidence 5555677889999999999999999999999887654566 677776667888888886 99999999999999999999
Q ss_pred CCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEee
Q psy2521 451 NTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 513 (783)
Q Consensus 451 ~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~ 513 (783)
..+.....+++| .|++.+++.+++++.++|+++|+++|+++|.+|+ +++ +.+++++
T Consensus 357 ~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~-----~t~--~~~~~k~ 413 (414)
T PF02897_consen 357 DDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDL-----ATG--ELTLLKQ 413 (414)
T ss_dssp T-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEET-----TTT--CEEEEEE
T ss_pred CCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEEC-----CCC--CEEEEEe
Confidence 427777888887 7888888888999999999999999999999999 678 7777765
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=401.86 Aligned_cols=556 Identities=18% Similarity=0.217 Sum_probs=365.0
Q ss_pred CccCCcEE--eCCeEEEEEEcC----CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC
Q psy2521 158 EKYSAPQR--QENNYFYFHNKG----LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG 231 (783)
Q Consensus 158 ~~~~~p~~--~G~~~yy~~~~~----~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G 231 (783)
..++.|.. .|+..+|..... ......+|+.+... +...... -....+.|||||+.+++.... |
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~------~~~~~~~----~~~~~~~~spdg~~~~~~~~~-~ 81 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT------VRLLTFG----GGVSELRWSPDGSVLAFVSTD-G 81 (620)
T ss_pred hcccCcccCCCCceeEEeeccccccccccccceEEEeccc------ccccccC----CcccccccCCCCCEEEEEecc-C
Confidence 34555554 478888876541 12234566533211 2222221 124567889999999998844 4
Q ss_pred CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCC-----------ccccc-CCceEEEEEc
Q psy2521 232 SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT-----------ETTAH-MGQKIYYHVL 299 (783)
Q Consensus 232 ~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~-----------~~~~~-~~~~v~~~~l 299 (783)
....++|++++. | .+...... .+...|+|+|+.+.+........ .++. ..... ....+|+.+.
T Consensus 82 ~~~~~l~l~~~~-g-~~~~~~~~--v~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~ 156 (620)
T COG1506 82 GRVAQLYLVDVG-G-LITKTAFG--VSDARWSPDGDRIAFLTAEGASK-RDGGDHLFVDRLPVWFDGRGGERSDLYVVDI 156 (620)
T ss_pred CCcceEEEEecC-C-ceeeeecc--cccceeCCCCCeEEEEecccccc-cCCceeeeecccceeecCCCCcccceEEEcc
Confidence 446789999988 5 22222222 36889999999999943221110 0111 00001 2233444443
Q ss_pred CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-CC--cEEEEEECCCCCCCcccCCCCceeeecCccc-eeE
Q psy2521 300 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-QG--SDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHE 375 (783)
Q Consensus 300 gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~-~~--~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~-~~~ 375 (783)
+. .. .... ....-...+.+.++++.++....... .. ...++....++ ....+..+... ...
T Consensus 157 ~~---~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 221 (620)
T COG1506 157 ES---KL-IKLG--LGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNG---------ELESLTPGEGSISKL 221 (620)
T ss_pred Cc---cc-cccc--CCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCC---------ceEEEcCCCceeeee
Confidence 32 00 0111 11112345666666777766654432 11 33333333232 12222222221 222
Q ss_pred EEEeeCCEEEEEECCCC----CCceEEEEcCCCCCCCCcEEeecCCC----CceEEEEEEeeCCEEEEEEec-CCeeEEE
Q psy2521 376 IIANNGPELIVKTTKNA----PKGKVVTINLNNPCEKNWKTLIPEDE----NRTLDVVAAVANNKLIVHYIQ-NVRSVMD 446 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~----~~~~L~~~d~~~~~~~~~~~li~~~~----~~~l~~~~~~~g~~l~~~~~~-~g~~~l~ 446 (783)
.+.++|+.+++..+... ....++..+...+. ........+ ...+... .+++.+++.... .+...+.
T Consensus 222 ~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~l~ 296 (620)
T COG1506 222 AFDADGKSIALLGTESDRGLAEGDFILLLDGELGE---VDGDLSSGDDTRGAWAVEGG--LDGDGLLFIATDGGGSSPLF 296 (620)
T ss_pred eeCCCCCeeEEeccCCccCccccceEEEEeccccc---cceeeccCCcccCcHHhccc--cCCCcEEEEEecCCCceEEE
Confidence 58889998888776543 23345555522222 111111111 1111111 344666666665 5555555
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCC-CCe
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPT-LFQ 525 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~-~~~ 525 (783)
..+...+. ...+..+.+.+..++. +++.+++.++++.+|+++|.++.. . +..+... ....+... ...
T Consensus 297 ~~~~~~~~-~~~~~~~~~~v~~f~~--~~~~~~~~~s~~~~p~~i~~~~~~------~--~~~~~~~-~~~~~~~~~~~~ 364 (620)
T COG1506 297 RVDDLGGG-VEGLSGDDGGVPGFDV--DGRKLALAYSSPTEPPEIYLYDRG------E--EAKLTSS-NNSGLKKVKLAE 364 (620)
T ss_pred EEeccCCc-eeeecCCCceEEEEee--CCCEEEEEecCCCCccceEEEcCC------C--ceEEeec-ccccccccccCC
Confidence 55542232 2344455577777775 788999999999999999999851 1 1222221 11222223 348
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
+|.+++++.||.+|+++++.|.++++.+++|+||++||||.....+.|...++.+. .+||+|+.+|+||+++||++|.+
T Consensus 365 ~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~-~~G~~V~~~n~RGS~GyG~~F~~ 443 (620)
T COG1506 365 PEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLA-SAGYAVLAPNYRGSTGYGREFAD 443 (620)
T ss_pred ceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHh-cCCeEEEEeCCCCCCccHHHHHH
Confidence 99999999999999999999999988888999999999998888778887765554 57999999999999999999999
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccch
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSE 685 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~ 685 (783)
+..+.++...++|+++++++|++.+++|++||+|+|+|+||+|+++++++.| +|+|+++..+.+|++.+........+.
T Consensus 444 ~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~ 522 (620)
T COG1506 444 AIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRF 522 (620)
T ss_pred hhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcC
Confidence 9999999999999999999999999999999999999999999999999988 889999999988877765432221111
Q ss_pred --hh-hCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 686 --SE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 686 --~~-~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
.+ .+.+.. ..+.+.+.||+.++++ +++| +||+||++|.|||..|+.+|+++|+.. |+++++.+
T Consensus 523 ~~~~~~~~~~~--~~~~~~~~sp~~~~~~----i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~-------g~~~~~~~ 588 (620)
T COG1506 523 DPEENGGGPPE--DREKYEDRSPIFYADN----IKTP-LLLIHGEEDDRVPIEQAEQLVDALKRK-------GKPVELVV 588 (620)
T ss_pred CHHHhCCCccc--ChHHHHhcChhhhhcc----cCCC-EEEEeecCCccCChHHHHHHHHHHHHc-------CceEEEEE
Confidence 11 123321 3466889999999988 7888 999999999999999999999999998 99999999
Q ss_pred eCCCCccCCccchhh
Q psy2521 763 EQDAGHGQGKALDIE 777 (783)
Q Consensus 763 ~~~~gHg~~~~~~~~ 777 (783)
||++||++.++++..
T Consensus 589 ~p~e~H~~~~~~~~~ 603 (620)
T COG1506 589 FPDEGHGFSRPENRV 603 (620)
T ss_pred eCCCCcCCCCchhHH
Confidence 999999999866543
|
|
| >KOG2281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=293.83 Aligned_cols=338 Identities=15% Similarity=0.176 Sum_probs=251.8
Q ss_pred ecCCCCceEEE--EEEeeC-CEEEEEEecCCe--eEEEEEECC-CCceeeeecCCCeEEEeeeccccccEEEEEEecCCC
Q psy2521 414 IPEDENRTLDV--VAAVAN-NKLIVHYIQNVR--SVMDLHDLN-TGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQ 487 (783)
Q Consensus 414 i~~~~~~~l~~--~~~~~g-~~l~~~~~~~g~--~~l~~~dl~-~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~ 487 (783)
++.+++.++.. +++..- +-+||...+++. .+|++..+. .|+. ..++.+..+. +-..+.+-+.++..++|-..
T Consensus 496 ltSgeweVl~r~Gi~VdE~~~LVYf~gt~d~PlE~hLyvvsye~~g~~-~rlt~~g~sh-~~~l~~~~d~fv~~~~sv~s 573 (867)
T KOG2281|consen 496 LTSGEWEVLARHGIWVDEVRKLVYFVGTKDTPLEHHLYVVSYENPGEI-ARLTEPGYSH-SCELDQQCDHFVSYYSSVGS 573 (867)
T ss_pred ecccceeehhhcCeeecccceEEEEEccCCCCceeeEEEEEEecCCce-eeccCCCccc-chhhhhhhhhHhhhhhcCCC
Confidence 44444555432 333332 345677777775 678888886 5654 6677662111 11122233447777889999
Q ss_pred CceEEEEeCCCCcCCCCCCceEEEeecc-----CC-CCCCCCC-eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEE
Q psy2521 488 PGTIYHCNIPENITDQDDFKPTIFRETI-----VP-EFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY 560 (783)
Q Consensus 488 P~~vy~~d~~~~~~~tg~~~~~~~~~~~-----~~-~~~~~~~-~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~ 560 (783)
|+.+..|.+. +++... +.++.. +. ...+.+| ..+-+.+.+..|..+.+.++.|.++++..++|++++
T Consensus 574 P~cv~~y~ls-----~~~~~~-l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~ 647 (867)
T KOG2281|consen 574 PPCVSLYSLS-----WPENDP-LPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLN 647 (867)
T ss_pred CceEEEEecc-----CCccCc-ccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEE
Confidence 9999999883 331111 111110 00 1123345 346677899899999999999999999999999999
Q ss_pred ecCCCCCcc-CCcCcHH---HHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc-CCCCCC
Q psy2521 561 GYGGYGVSV-LPTFSIS---RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KYTKPK 635 (783)
Q Consensus 561 ~hGg~~~~~-~~~~~~~---~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-~~~d~~ 635 (783)
+||||+... ...|... +...|+.+||+|+++|-||+-..|..|-...+...++..++|.+.++++|+++ |++|++
T Consensus 648 VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmd 727 (867)
T KOG2281|consen 648 VYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMD 727 (867)
T ss_pred EcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccch
Confidence 999999863 3445432 45667778999999999999999999988888899999999999999999998 599999
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhh-CCCCCHHHHHHHHhcCcccCCCCCCC
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPN 714 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~-g~p~~~~~~~~~~~~sp~~~v~~~~~ 714 (783)
||+|.|+|+||||++.+++++|+.|++||+++|+++|..+.. .+.+.| |.|++.+. .+.+-|-.+++.+-
T Consensus 728 rV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDT-----gYTERYMg~P~~nE~--gY~agSV~~~Vekl-- 798 (867)
T KOG2281|consen 728 RVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDT-----GYTERYMGYPDNNEH--GYGAGSVAGHVEKL-- 798 (867)
T ss_pred heeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecc-----cchhhhcCCCccchh--cccchhHHHHHhhC--
Confidence 999999999999999999999999999999999999987764 245566 67744332 13455555555442
Q ss_pred CCcCCc-EEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchh
Q psy2521 715 NTQYPA-TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDI 776 (783)
Q Consensus 715 ~~~~P~-~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~ 776 (783)
..-|. +|++||.-|..|++.|...++.+|-++ |+|.++.+||++.|+...++..
T Consensus 799 -pdepnRLlLvHGliDENVHF~Hts~Lvs~lvka-------gKpyeL~IfP~ERHsiR~~es~ 853 (867)
T KOG2281|consen 799 -PDEPNRLLLVHGLIDENVHFAHTSRLVSALVKA-------GKPYELQIFPNERHSIRNPESG 853 (867)
T ss_pred -CCCCceEEEEecccccchhhhhHHHHHHHHHhC-------CCceEEEEccccccccCCCccc
Confidence 12232 999999999999999999999999999 9999999999999998766543
|
|
| >KOG2100|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-29 Score=292.75 Aligned_cols=422 Identities=16% Similarity=0.162 Sum_probs=274.2
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc-cCCCCceeeecCccceeEEEEeeC-CEEEEEECCCCCCceE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI-SGKFPLKTVIPGMDHHHEIIANNG-PELIVKTTKNAPKGKV 397 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l-~~~~~~~~l~~~~~~~~~~~s~dg-~~l~~~t~~~~~~~~L 397 (783)
....|..+.+-++...++......+-+.|.. +.+... ....+- ..+.... ....++.|+ ..+++....+++-..+
T Consensus 292 ~~~~W~~~~~~~~~~~~r~~~~~~~~~cd~~-~~~~~~~~~~~~~-~W~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~hi 368 (755)
T KOG2100|consen 292 TNVKWDTTEKVLVVWTNREQNISVETLCDTP-GICRVVYEESSDG-GWVEHQN-VEPVFSSDGSSYLKVDSVSDGGYNHI 368 (755)
T ss_pred EEEEEecCccEEEEEEccCCCeeeeEEecCc-ccceeeEeccccc-ccccccc-ccceEeecCCceeEEEeeccCCEEEE
Confidence 4566777766666655554433455555554 111100 000000 0011101 112466665 4455545444433345
Q ss_pred EEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEEecC--CeeEEEEEECCCCceeeeecCC----CeEEEeee
Q psy2521 398 VTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQN--VRSVMDLHDLNTGKRLHSFPLD----LGQITHIS 470 (783)
Q Consensus 398 ~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~~~--g~~~l~~~dl~~G~~~~~l~~~----~g~v~~~s 470 (783)
..+....+. ....+ +.+.+.+...... .+.+.+++..... +..+|+..++.++.. ..++.. .......+
T Consensus 369 ~~~~~~~~~--~~~~l-t~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~~-~~lt~~~~~~~~~~~~~~ 444 (755)
T KOG2100|consen 369 AYLKLSNGS--EPRML-TSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGTV-ESLTCSLITGPCTYLSVS 444 (755)
T ss_pred EEEEcCCCC--ccccc-cccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEcccccc-ccccccCCCCcceEEEEe
Confidence 555554442 12222 2333444322222 2446788877764 556788888855443 445543 22333455
Q ss_pred ccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeecc-CC-CCC---CCCCeEEEEEEECCCCcEEEEEEEE
Q psy2521 471 GRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETI-VP-EFE---PTLFQTKQVYFRSKDGTRVPMYIIH 545 (783)
Q Consensus 471 ~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~-~~-~~~---~~~~~~~~~~~~s~dg~~v~~~~~~ 545 (783)
.+.....+....+.+..|.. .+..... ... .....|.... +. .+. ......+++.+ ||....+.++.
T Consensus 445 ~~~~~~~~v~~~~gP~~p~~--~~~~~~~--~~~-~~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~---~~~~~~~~~~l 516 (755)
T KOG2100|consen 445 FSKSAKYYVLSCSGPKVPDG--QLTRHSS--KNS-KTIVVLETNEELKKTIENVALPIVEFGKIEI---DGITANAILIL 516 (755)
T ss_pred cCCcccEEEEEccCCCCCcc--eeecccc--ccc-eEEEEeccChhhHHHhhcccCCcceeEEEEe---ccEEEEEEEec
Confidence 55556677777777777743 2222100 011 0122333221 11 111 11222333333 89999999999
Q ss_pred ecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHH-HHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHH
Q psy2521 546 RVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCM-FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAA 623 (783)
Q Consensus 546 p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~-~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~ 623 (783)
|+++.+.++.|+|+..||||++. ....|...+.. .+...|++|+.+|+||+|++|.++..+..+..+..+.+|.+.++
T Consensus 517 P~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~ 596 (755)
T KOG2100|consen 517 PPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAV 596 (755)
T ss_pred CCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHH
Confidence 99998889999999999999843 23334444433 34567999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC-CceeEEEEcCCcchhhhcccccccccchhhh-CCCCCHHHHHHHH
Q psy2521 624 EYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP-ELYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLL 701 (783)
Q Consensus 624 ~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p-~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~-g~p~~~~~~~~~~ 701 (783)
+++++.+++|++||+|+|+|+||+|++.++...| +.|+|+++.+|++|+. +... .+.++| |.|..... .+.
T Consensus 597 ~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds----~~terymg~p~~~~~--~y~ 669 (755)
T KOG2100|consen 597 KKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDS----TYTERYMGLPSENDK--GYE 669 (755)
T ss_pred HHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecc----cccHhhcCCCccccc--hhh
Confidence 9999999999999999999999999999999988 8999999999999999 4432 234566 66643322 145
Q ss_pred hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 702 SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 702 ~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
+.++..++.. ++.|-+|++||+.|++|+++|+.+++++|+.+ |.++.+.+||++.|++....
T Consensus 670 e~~~~~~~~~----~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~-------gv~~~~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 670 ESSVSSPANN----IKTPKLLLIHGTEDDNVHFQQSAILIKALQNA-------GVPFRLLVYPDENHGISYVE 731 (755)
T ss_pred hccccchhhh----hccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC-------CCceEEEEeCCCCccccccc
Confidence 5566655554 45555899999999999999999999999999 99999999999999998654
|
|
| >PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=263.06 Aligned_cols=193 Identities=33% Similarity=0.525 Sum_probs=158.5
Q ss_pred CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHH
Q psy2521 571 PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 650 (783)
Q Consensus 571 ~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~ 650 (783)
|+|+. ..++|+++||+|+.+|+||+++||++|+..+...++...++|+++++++|++++.+|++||+|+|+|+||++++
T Consensus 1 ~~f~~-~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~ 79 (213)
T PF00326_consen 1 PSFNW-NAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLAL 79 (213)
T ss_dssp ---SH-HHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHH
T ss_pred CeeeH-HHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccc
Confidence 45663 45788788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCceeEEEEcCCcchhhhccccc--ccccchhhhCCCC-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecC
Q psy2521 651 ACLNQRPELYGAALILVGALDMLRFNKFT--IAYYSESEFGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD 727 (783)
Q Consensus 651 ~~~~~~p~lf~a~i~~~~~~d~~~~~~~~--~~~~~~~~~g~p~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~ 727 (783)
.+++++|++|+++++.+|++|+..+...+ ....+..++|.+. .++.++.+..++++.++. ..||+||+||+
T Consensus 80 ~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~------~~~P~li~hG~ 153 (213)
T PF00326_consen 80 LAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQ------IKPPVLIIHGE 153 (213)
T ss_dssp HHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG------GGSEEEEEEET
T ss_pred hhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhcccccccccc------CCCCEEEEccC
Confidence 99999999999999999999998876543 2222456778874 555565555555555522 22349999999
Q ss_pred CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 728 HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 728 ~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
+|++||+.++.+++++|++. |.+++++++|++||++..+.++.
T Consensus 154 ~D~~Vp~~~s~~~~~~L~~~-------g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 154 NDPRVPPSQSLRLYNALRKA-------GKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp TBSSSTTHHHHHHHHHHHHT-------TSSEEEEEETT-SSSTTSHHHHH
T ss_pred CCCccCHHHHHHHHHHHHhc-------CCCEEEEEcCcCCCCCCCchhHH
Confidence 99999999999999999999 99999999999999998766554
|
; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B .... |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.9e-20 Score=207.16 Aligned_cols=299 Identities=11% Similarity=0.108 Sum_probs=209.1
Q ss_pred HhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCCCCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEE
Q psy2521 95 MQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFH 174 (783)
Q Consensus 95 ~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~ 174 (783)
+|+.+++.|+...+.+..+ ..||.+.+.+...+.|...+++++|.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~----------------------------------a~~~~~~i~~~~~g~~~~~~~~~~~~~ 162 (417)
T TIGR02800 117 QLQLLGKQYTVTASQLRRV----------------------------------AHRIADAIYEKLTGERGAFSTRIAYVS 162 (417)
T ss_pred eEEeeeeeEEcCHHHHHHH----------------------------------HHHHHHHHHHHhcCCCCCcCCEEEEEE
Confidence 3677888888776777777 555555555566678888899999998
Q ss_pred EcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc
Q psy2521 175 NKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN 254 (783)
Q Consensus 175 ~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~ 254 (783)
..+.+.+..||+++..++..+.|++++.. +..+.|||||++|||....+|. .+|+++|+++|+........
T Consensus 163 ~~~~~~~~~l~~~d~~g~~~~~l~~~~~~-------~~~p~~Spdg~~la~~~~~~~~--~~i~v~d~~~g~~~~~~~~~ 233 (417)
T TIGR02800 163 KSGKSRRYELQVADYDGANPQTITRSREP-------ILSPAWSPDGQKLAYVSFESGK--PEIYVQDLATGQREKVASFP 233 (417)
T ss_pred EeCCCCcceEEEEcCCCCCCEEeecCCCc-------eecccCCCCCCEEEEEEcCCCC--cEEEEEECCCCCEEEeecCC
Confidence 87767788999988755667788886632 4567899999999999876554 78999999998754433222
Q ss_pred cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy2521 255 VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 334 (783)
Q Consensus 255 ~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~ 334 (783)
.....++|+|||+.|+|+... ....+||+++++++...+ +.... .....+.|+|||++|++.
T Consensus 234 ~~~~~~~~spDg~~l~~~~~~-------------~~~~~i~~~d~~~~~~~~--l~~~~---~~~~~~~~s~dg~~l~~~ 295 (417)
T TIGR02800 234 GMNGAPAFSPDGSKLAVSLSK-------------DGNPDIYVMDLDGKQLTR--LTNGP---GIDTEPSWSPDGKSIAFT 295 (417)
T ss_pred CCccceEECCCCCEEEEEECC-------------CCCccEEEEECCCCCEEE--CCCCC---CCCCCEEECCCCCEEEEE
Confidence 222568999999999998732 223579999998764332 22211 122467899999999998
Q ss_pred EecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce-eEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe
Q psy2521 335 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413 (783)
Q Consensus 335 ~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l 413 (783)
+.+. ....||++|+.++. ...+....... ...|+|||+.|++.... ++.++|+.+|++++. ..+
T Consensus 296 s~~~-g~~~iy~~d~~~~~---------~~~l~~~~~~~~~~~~spdg~~i~~~~~~-~~~~~i~~~d~~~~~----~~~ 360 (417)
T TIGR02800 296 SDRG-GSPQIYMMDADGGE---------VRRLTFRGGYNASPSWSPDGDLIAFVHRE-GGGFNIAVMDLDGGG----ERV 360 (417)
T ss_pred ECCC-CCceEEEEECCCCC---------EEEeecCCCCccCeEECCCCCEEEEEEcc-CCceEEEEEeCCCCC----eEE
Confidence 7653 33689999998742 22333222222 22699999988887654 466789999998743 344
Q ss_pred ecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeec
Q psy2521 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471 (783)
Q Consensus 414 i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~ 471 (783)
+++. .......+.++++.|++...+++...+++++. +|+..+.++.+.|.+..++|
T Consensus 361 l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 361 LTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLGNGDVREPAW 416 (417)
T ss_pred ccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCCCCCcCCCCC
Confidence 5443 22233345667788999999998889999988 68777778777666655544
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK13604 luxD acyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=185.03 Aligned_cols=223 Identities=11% Similarity=0.125 Sum_probs=154.2
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC-CCCChh
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGED 602 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~~ 602 (783)
+.+....+.+.||.++.+|+..|++. ...+.|+||+.||-.+.. .+...++.+|+++||.|+.+|.||+ |+.+.+
T Consensus 7 ~~~~~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~---~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~ 82 (307)
T PRK13604 7 FKTIDHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM---DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGT 82 (307)
T ss_pred ccchhheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh---HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCc
Confidence 34455557788999999999999752 246789999999965533 2244567788888999999999886 766655
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 682 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~ 682 (783)
+.+.... ....|+.++++||++++ .++|+++|+||||.++..++... + .+++|+.+|+.++.....-....
T Consensus 83 ~~~~t~s----~g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~-~-v~~lI~~sp~~~l~d~l~~~~~~ 153 (307)
T PRK13604 83 IDEFTMS----IGKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI-D-LSFLITAVGVVNLRDTLERALGY 153 (307)
T ss_pred cccCccc----ccHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC-C-CCEEEEcCCcccHHHHHHHhhhc
Confidence 5433221 12689999999998863 46899999999999987776643 3 78999999999976433210000
Q ss_pred -----cchh-----hh-CCCC-CHHHHHHHHh------cCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHH
Q psy2521 683 -----YSES-----EF-GSPN-NKTHFHNLLS------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL 744 (783)
Q Consensus 683 -----~~~~-----~~-g~p~-~~~~~~~~~~------~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L 744 (783)
.+.. +| |.+- ....++.... .+|+..++. .+.| +|++||..|+.||+.++.++++++
T Consensus 154 ~~~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~----l~~P-vLiIHG~~D~lVp~~~s~~l~e~~ 228 (307)
T PRK13604 154 DYLSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKG----LDIP-FIAFTANNDSWVKQSEVIDLLDSI 228 (307)
T ss_pred ccccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhh----cCCC-EEEEEcCCCCccCHHHHHHHHHHh
Confidence 0000 01 1111 0111111112 234455554 5667 999999999999999999999987
Q ss_pred HhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 745 QEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 745 ~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+.. +..+.++++++|.+...
T Consensus 229 ~s~---------~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 229 RSE---------QCKLYSLIGSSHDLGEN 248 (307)
T ss_pred ccC---------CcEEEEeCCCccccCcc
Confidence 533 56899999999999754
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.9e-18 Score=189.54 Aligned_cols=263 Identities=13% Similarity=0.093 Sum_probs=177.5
Q ss_pred CCeEEEEEE-cCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC
Q psy2521 167 ENNYFYFHN-KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 245 (783)
Q Consensus 167 G~~~yy~~~-~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg 245 (783)
..+..|... .+.+....||..+..+...++|++.+. .+..+.|||||++|+|+...+|. .+||++|+.+|
T Consensus 182 ~~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~-------~~~~p~wSPDG~~La~~s~~~g~--~~L~~~dl~tg 252 (448)
T PRK04792 182 LTRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPE-------PLMSPAWSPDGRKLAYVSFENRK--AEIFVQDIYTQ 252 (448)
T ss_pred cCEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCC-------cccCceECCCCCEEEEEEecCCC--cEEEEEECCCC
Confidence 345555544 333335688887764555666665432 25679999999999999876554 78999999999
Q ss_pred ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEe
Q psy2521 246 KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 325 (783)
Q Consensus 246 ~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~S 325 (783)
+....+........++|||||+.|+|+... ....+||++++.++..+ .+... ......+.||
T Consensus 253 ~~~~lt~~~g~~~~~~wSPDG~~La~~~~~-------------~g~~~Iy~~dl~tg~~~--~lt~~---~~~~~~p~wS 314 (448)
T PRK04792 253 VREKVTSFPGINGAPRFSPDGKKLALVLSK-------------DGQPEIYVVDIATKALT--RITRH---RAIDTEPSWH 314 (448)
T ss_pred CeEEecCCCCCcCCeeECCCCCEEEEEEeC-------------CCCeEEEEEECCCCCeE--ECccC---CCCccceEEC
Confidence 865544222222578999999999998732 12357999999876432 22222 1123568999
Q ss_pred cCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 326 DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 326 pDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
|||++|++.+.+. ...+||++|+++|. ...++.. .......|+|||+.|+|.+.. ...++|+.+|+++
T Consensus 315 pDG~~I~f~s~~~-g~~~Iy~~dl~~g~---------~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~ 383 (448)
T PRK04792 315 PDGKSLIFTSERG-GKPQIYRVNLASGK---------VSRLTFEGEQNLGGSITPDGRSMIMVNRT-NGKFNIARQDLET 383 (448)
T ss_pred CCCCEEEEEECCC-CCceEEEEECCCCC---------EEEEecCCCCCcCeeECCCCCEEEEEEec-CCceEEEEEECCC
Confidence 9999999987653 34799999998742 2333321 111123699999999997664 3456899999987
Q ss_pred CCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 405 PCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 405 ~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
+. .+.+.... . .....+.++|+.|++....++...|+++++ +|+..+.++.+.+.+..++|+|
T Consensus 384 g~---~~~lt~~~-~-d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 384 GA---MQVLTSTR-L-DESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CC---eEEccCCC-C-CCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 65 34343221 1 123346677788999998889899999998 7887677876656665666654
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-18 Score=188.66 Aligned_cols=276 Identities=9% Similarity=0.034 Sum_probs=177.8
Q ss_pred cCCcEEeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcE--EEEEEecCCCc
Q psy2521 160 YSAPQRQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKH--FAYCLSKSGSD 233 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~--la~~~~~~G~d 233 (783)
.+.|..-+.+..|..+..+. ....||+.+..++..+.|...+.. ...++|||||+. ++|....+|.
T Consensus 139 tg~~g~~~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~-------~~sP~wSPDG~~~~~~y~S~~~g~- 210 (428)
T PRK01029 139 TGVPGISSGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSL-------SITPTWMHIGSGFPYLYVSYKLGV- 210 (428)
T ss_pred cCCCccccCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCC-------cccceEccCCCceEEEEEEccCCC-
Confidence 34455558898888765432 256899998766666666653322 356899999998 5557776664
Q ss_pred eEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEE--EcCCCC-CCceeEE
Q psy2521 234 WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH--VLGTEQ-DKDIPVV 310 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~--~lgt~~-~~d~~v~ 310 (783)
.+||++++++|+....+........++|||||+.|+|+.... ....+|.+ ++.+.. .+.+.+.
T Consensus 211 -~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~-------------g~~di~~~~~~~~~g~~g~~~~lt 276 (428)
T PRK01029 211 -PKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRY-------------GNPDLFIQSFSLETGAIGKPRRLL 276 (428)
T ss_pred -ceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCC-------------CCcceeEEEeecccCCCCcceEee
Confidence 789999999998766553322235799999999999998321 12245654 333321 1223344
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc-eeEEEEeeCCEEEEEEC
Q psy2521 311 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTT 389 (783)
Q Consensus 311 ~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~ 389 (783)
.... .....+.|||||++|+|.+.+. ...+||++++... . ...+.+...... ....|+|||++|+|.+.
T Consensus 277 ~~~~--~~~~~p~wSPDG~~Laf~s~~~-g~~~ly~~~~~~~-g------~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~ 346 (428)
T PRK01029 277 NEAF--GTQGNPSFSPDGTRLVFVSNKD-GRPRIYIMQIDPE-G------QSPRLLTKKYRNSSCPAWSPDGKKIAFCSV 346 (428)
T ss_pred cCCC--CCcCCeEECCCCCEEEEEECCC-CCceEEEEECccc-c------cceEEeccCCCCccceeECCCCCEEEEEEc
Confidence 3221 1224689999999999987653 3468999988641 0 112223322221 22369999999999887
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEee
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 469 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~ 469 (783)
.++ ..+|+.+|+++++ .+.+... +.......+.++|+.|++....++...|+++|+.+|+. +.|+...|.+..+
T Consensus 347 ~~g-~~~I~v~dl~~g~---~~~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~-~~Lt~~~g~~~~p 420 (428)
T PRK01029 347 IKG-VRQICVYDLATGR---DYQLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKT-RKIVIGSGEKRFP 420 (428)
T ss_pred CCC-CcEEEEEECCCCC---eEEccCC-CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCcccCc
Confidence 643 5689999998876 3444433 22333445666777888888878888999999965554 5665444555555
Q ss_pred eccc
Q psy2521 470 SGRR 473 (783)
Q Consensus 470 s~~~ 473 (783)
.|+|
T Consensus 421 ~Ws~ 424 (428)
T PRK01029 421 SWGA 424 (428)
T ss_pred eecC
Confidence 5554
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-17 Score=183.88 Aligned_cols=263 Identities=14% Similarity=0.076 Sum_probs=177.6
Q ss_pred CCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC
Q psy2521 167 ENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 245 (783)
Q Consensus 167 G~~~yy~~~~~-~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg 245 (783)
..+..|..... +.....||+.+..++..+.++..+. .+..++|||||++|||....+|. .+|+++|+.+|
T Consensus 163 ~~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~~~~p~wSPDG~~la~~s~~~g~--~~i~i~dl~~G 233 (429)
T PRK03629 163 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-------PLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 233 (429)
T ss_pred CCeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCC-------ceeeeEEcCCCCEEEEEEecCCC--cEEEEEECCCC
Confidence 46777776543 3446789998865555566655332 26789999999999998865553 68999999999
Q ss_pred ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEe
Q psy2521 246 KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 325 (783)
Q Consensus 246 ~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~S 325 (783)
+....+........+.|||||+.|+|+... ....+||++++.++.. ..+.... .....+.||
T Consensus 234 ~~~~l~~~~~~~~~~~~SPDG~~La~~~~~-------------~g~~~I~~~d~~tg~~--~~lt~~~---~~~~~~~wS 295 (429)
T PRK03629 234 AVRQVASFPRHNGAPAFSPDGSKLAFALSK-------------TGSLNLYVMDLASGQI--RQVTDGR---SNNTEPTWF 295 (429)
T ss_pred CeEEccCCCCCcCCeEECCCCCEEEEEEcC-------------CCCcEEEEEECCCCCE--EEccCCC---CCcCceEEC
Confidence 765544222223579999999999998622 1234699999876532 2232221 123578999
Q ss_pred cCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc-eeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 326 DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 326 pDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
|||++|++.+.+. ...+||++|++++. ...+...... ....|+|||+.|++.+..++ ...|+.+|+++
T Consensus 296 PDG~~I~f~s~~~-g~~~Iy~~d~~~g~---------~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g-~~~I~~~dl~~ 364 (429)
T PRK03629 296 PDSQNLAYTSDQA-GRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDLAT 364 (429)
T ss_pred CCCCEEEEEeCCC-CCceEEEEECCCCC---------eEEeecCCCCccCEEECCCCCEEEEEEccCC-CceEEEEECCC
Confidence 9999999987653 34699999998742 2223322111 22359999999999876543 45799999987
Q ss_pred CCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 405 PCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 405 ~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
+. ++.+.. . .......++++|..|++...+.+...|+++++ +|+..+.|+...+.+..+.|+|
T Consensus 365 g~---~~~Lt~-~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 365 GG---VQVLTD-T-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred CC---eEEeCC-C-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCcccCC
Confidence 65 444443 2 22223456677778888888777788999999 7876677765456666666654
|
|
| >PLN02442 S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=182.02 Aligned_cols=228 Identities=12% Similarity=0.068 Sum_probs=152.2
Q ss_pred eEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCC------
Q psy2521 525 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG------ 597 (783)
Q Consensus 525 ~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g------ 597 (783)
..+.+++.| .-|..+++.++.|+. ...++.|+|+++||..+....+.+......+++..|++|+++|..+.|
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCc-ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 456666666 467889999999984 345689999999998766544333333456777789999999976533
Q ss_pred ------CCChhHHhhcc-ccCC-cC----hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 598 ------ELGEDWHNAGR-LLKK-QN----CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 598 ------~~G~~~~~~g~-~~~~-~~----~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
++|..|+.... ..++ .. ..+++...++... ..+|+++++|+|+|+||++++.++.++|++|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~ 173 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSA 173 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEE
Confidence 11222211111 0111 01 1223332333222 236889999999999999999999999999999999
Q ss_pred cCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH-HHHHHHHHH
Q psy2521 666 LVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-HSYKFIATL 744 (783)
Q Consensus 666 ~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~-~~~~~~~~L 744 (783)
.+|++|+.... .. .......+|.+. +.++.+...+|+.++.. ...| +|++||+.|++|+.. ++..++++|
T Consensus 174 ~~~~~~~~~~~-~~-~~~~~~~~g~~~--~~~~~~d~~~~~~~~~~----~~~p-vli~~G~~D~~v~~~~~s~~~~~~l 244 (283)
T PLN02442 174 FAPIANPINCP-WG-QKAFTNYLGSDK--ADWEEYDATELVSKFND----VSAT-ILIDQGEADKFLKEQLLPENFEEAC 244 (283)
T ss_pred ECCccCcccCc-hh-hHHHHHHcCCCh--hhHHHcChhhhhhhccc----cCCC-EEEEECCCCccccccccHHHHHHHH
Confidence 99998854211 00 001112345432 23444444555555543 4555 999999999999974 688999999
Q ss_pred HhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 745 QEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 745 ~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++. |.+++++++++.+|++.
T Consensus 245 ~~~-------g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 245 KEA-------GAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHc-------CCCeEEEEeCCCCccHH
Confidence 988 88999999999999875
|
|
| >PRK10566 esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-19 Score=183.03 Aligned_cols=218 Identities=16% Similarity=0.137 Sum_probs=139.0
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC-ChhHHhhccc--cCCcC
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL-GEDWHNAGRL--LKKQN 614 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~-G~~~~~~g~~--~~~~~ 614 (783)
.++...+.|.+ ..+++.|+||++||..+.... |. .....|+++||.|+++|+||.|.. +..-...... .....
T Consensus 11 ~~~~~~~~p~~-~~~~~~p~vv~~HG~~~~~~~--~~-~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK10566 11 GIEVLHAFPAG-QRDTPLPTVFFYHGFTSSKLV--YS-YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQ 86 (249)
T ss_pred CcceEEEcCCC-CCCCCCCEEEEeCCCCcccch--HH-HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHH
Confidence 45556666764 224568999999997665432 33 345666667999999999995531 1100000000 00113
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE-cCCcchhhhcccccccccchhhhCCCCC
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI-LVGALDMLRFNKFTIAYYSESEFGSPNN 693 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~-~~~~~d~~~~~~~~~~~~~~~~~g~p~~ 693 (783)
..+|+.++++++++++.+|++||+++|+|+||++++.++.++|++.++++. ..+.++......+. ... ...+..
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~ 161 (249)
T PRK10566 87 NMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFP--PLI---PETAAQ 161 (249)
T ss_pred HHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhcc--ccc---cccccc
Confidence 467888899999998889999999999999999999999998986544432 23322211100000 000 001111
Q ss_pred ----HHHHHHHHhcCcccCCCCCCCCC-cCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC--cEEEEEeCCC
Q psy2521 694 ----KTHFHNLLSYSPLHNIKVPPNNT-QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN--PLLLRVEQDA 766 (783)
Q Consensus 694 ----~~~~~~~~~~sp~~~v~~~~~~~-~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~--~~~l~~~~~~ 766 (783)
.+.+..+..+++...+.. + ..| +|++||++|..|++.++.+++++|+.+ |. .+.+.+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~----i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~~~~~~ 229 (249)
T PRK10566 162 QAEFNNIVAPLAEWEVTHQLEQ----LADRP-LLLWHGLADDVVPAAESLRLQQALRER-------GLDKNLTCLWEPGV 229 (249)
T ss_pred HHHHHHHHHHHhhcChhhhhhh----cCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhc-------CCCcceEEEecCCC
Confidence 111222344555444443 3 466 999999999999999999999999887 65 4788999999
Q ss_pred CccCCccchh
Q psy2521 767 GHGQGKALDI 776 (783)
Q Consensus 767 gHg~~~~~~~ 776 (783)
||++....-+
T Consensus 230 ~H~~~~~~~~ 239 (249)
T PRK10566 230 RHRITPEALD 239 (249)
T ss_pred CCccCHHHHH
Confidence 9998644333
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.9e-17 Score=181.22 Aligned_cols=255 Identities=11% Similarity=0.116 Sum_probs=172.7
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcE-EEEEEecCCCceEEEEEEECCCCcc
Q psy2521 169 NYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKH-FAYCLSKSGSDWNTLHIKDVDTGKD 247 (783)
Q Consensus 169 ~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~-la~~~~~~G~d~~~i~v~Dl~tg~~ 247 (783)
..|+.+..+. ....||+.+..+...++++... ....+.|||||++ ++|+...++. .+||++|+++|+.
T Consensus 157 ~~~v~~~~~~-~~~~l~~~d~dg~~~~~~~~~~--------~~~~p~wSpDG~~~i~y~s~~~~~--~~Iyv~dl~tg~~ 225 (419)
T PRK04043 157 KVVFSKYTGP-KKSNIVLADYTLTYQKVIVKGG--------LNIFPKWANKEQTAFYYTSYGERK--PTLYKYNLYTGKK 225 (419)
T ss_pred EEEEEEccCC-CcceEEEECCCCCceeEEccCC--------CeEeEEECCCCCcEEEEEEccCCC--CEEEEEECCCCcE
Confidence 3455553342 4688999887555556555422 1457999999997 5555544333 5899999999987
Q ss_pred ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC
Q psy2521 248 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 327 (783)
Q Consensus 248 ~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD 327 (783)
...+........+.|||||+.|+|+... ....+||+.++.++.. +.+...+. ....+.||||
T Consensus 226 ~~lt~~~g~~~~~~~SPDG~~la~~~~~-------------~g~~~Iy~~dl~~g~~--~~LT~~~~---~d~~p~~SPD 287 (419)
T PRK04043 226 EKIASSQGMLVVSDVSKDGSKLLLTMAP-------------KGQPDIYLYDTNTKTL--TQITNYPG---IDVNGNFVED 287 (419)
T ss_pred EEEecCCCcEEeeEECCCCCEEEEEEcc-------------CCCcEEEEEECCCCcE--EEcccCCC---ccCccEECCC
Confidence 7665433223468899999999999832 1245899999876532 23333221 2346789999
Q ss_pred CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCC-----CCceEEEEcC
Q psy2521 328 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNA-----PKGKVVTINL 402 (783)
Q Consensus 328 Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~-----~~~~L~~~d~ 402 (783)
|++|+|.+++. +..+||++|+++|. .++++...... ..|+|||+.|+|.+.... ..++|+.+|+
T Consensus 288 G~~I~F~Sdr~-g~~~Iy~~dl~~g~---------~~rlt~~g~~~-~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~ 356 (419)
T PRK04043 288 DKRIVFVSDRL-GYPNIFMKKLNSGS---------VEQVVFHGKNN-SSVSTYKNYIVYSSRETNNEFGKNTFNLYLIST 356 (419)
T ss_pred CCEEEEEECCC-CCceEEEEECCCCC---------eEeCccCCCcC-ceECCCCCEEEEEEcCCCcccCCCCcEEEEEEC
Confidence 99999998763 45799999998853 22233221111 269999999999887542 2368999999
Q ss_pred CCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEee
Q psy2521 403 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI 469 (783)
Q Consensus 403 ~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~ 469 (783)
+++. ++.|.... . .....++++|+.|++.....+...|+++++ +|...+.++...|.+..+
T Consensus 357 ~~g~---~~~LT~~~-~-~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l-~g~~~~~l~~~~g~~~~p 417 (419)
T PRK04043 357 NSDY---IRRLTANG-V-NQFPRFSSDGGSIMFIKYLGNQSALGIIRL-NYNKSFLFPLKVGKIQSI 417 (419)
T ss_pred CCCC---eEECCCCC-C-cCCeEECCCCCEEEEEEccCCcEEEEEEec-CCCeeEEeecCCCccCCC
Confidence 8876 55555443 2 223557778788999888888889999999 687656676655655443
|
|
| >TIGR02821 fghA_ester_D S-formylglutathione hydrolase | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=179.74 Aligned_cols=229 Identities=14% Similarity=0.093 Sum_probs=153.8
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--CCCCCCC-
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELG- 600 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~G- 600 (783)
..+.+.+.+. -+..+++.++.|++.. .++.|+|+++||..+....+.+......++++.|+.|+++|. ||.+..|
T Consensus 12 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 12 TQGFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred EEEEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 4555555553 5677889999998743 356899999999876665544333345666667999999997 6655333
Q ss_pred -hhH--------Hhhcc-ccC--CcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 601 -EDW--------HNAGR-LLK--KQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 601 -~~~--------~~~g~-~~~--~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
..| +.... ..+ .....+.+...+..+++. ..+|++|++|+|+||||++++.++.++|++|+++++.+
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 122 21100 001 112233344455555554 34788999999999999999999999999999999999
Q ss_pred CcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc-HHHHHHHHHHHh
Q psy2521 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP-LHSYKFIATLQE 746 (783)
Q Consensus 668 ~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~-~~~~~~~~~L~~ 746 (783)
|+++..... .. .......+|.+.. . +..++|...+... ...||+|+.||..|++|+. .++..+.++|++
T Consensus 171 ~~~~~~~~~-~~-~~~~~~~l~~~~~--~---~~~~~~~~~~~~~---~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~ 240 (275)
T TIGR02821 171 PIVAPSRCP-WG-QKAFSAYLGADEA--A---WRSYDASLLVADG---GRHSTILIDQGTADQFLDEQLRPDAFEQACRA 240 (275)
T ss_pred CccCcccCc-ch-HHHHHHHhccccc--c---hhhcchHHHHhhc---ccCCCeeEeecCCCcccCccccHHHHHHHHHH
Confidence 998864311 00 0011122333221 1 2244555443321 1345699999999999999 688999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+ |.++++.++++++|+|.
T Consensus 241 ~-------g~~v~~~~~~g~~H~f~ 258 (275)
T TIGR02821 241 A-------GQALTLRRQAGYDHSYY 258 (275)
T ss_pred c-------CCCeEEEEeCCCCccch
Confidence 8 99999999999999986
|
This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-17 Score=183.25 Aligned_cols=262 Identities=11% Similarity=0.081 Sum_probs=173.7
Q ss_pred CCeEEEEEEcCCCC--eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC
Q psy2521 167 ENNYFYFHNKGLQN--HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 244 (783)
Q Consensus 167 G~~~yy~~~~~~~~--~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t 244 (783)
..+++|....++.+ ...||+.+..+...+.|...+. .+..++|||||++|+|....+|. .+||++|+++
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~-------~v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~~ 235 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSS-------LVLTPRFSPNRQEITYMSYANGR--PRVYLLDLET 235 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCC-------CeEeeEECCCCCEEEEEEecCCC--CEEEEEECCC
Confidence 45788877655432 5788988764555556654332 26789999999999999876654 7899999999
Q ss_pred CccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE
Q psy2521 245 GKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV 324 (783)
Q Consensus 245 g~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~ 324 (783)
|+....+........+.|||||+.|+|+... ....+||++++.++.. ..+... ......+.|
T Consensus 236 g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~-------------~g~~~Iy~~d~~~~~~--~~Lt~~---~~~~~~~~~ 297 (435)
T PRK05137 236 GQRELVGNFPGMTFAPRFSPDGRKVVMSLSQ-------------GGNTDIYTMDLRSGTT--TRLTDS---PAIDTSPSY 297 (435)
T ss_pred CcEEEeecCCCcccCcEECCCCCEEEEEEec-------------CCCceEEEEECCCCce--EEccCC---CCccCceeE
Confidence 9865544322223578999999999998732 2245799999876532 223222 223346899
Q ss_pred ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcCC
Q psy2521 325 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLN 403 (783)
Q Consensus 325 SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~ 403 (783)
||||++|+|.+.+. ...+||++|++++. .+.+..+.. .....|+|||+.|+|.+... ..++|+.++++
T Consensus 298 spDG~~i~f~s~~~-g~~~Iy~~d~~g~~---------~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~-~~~~i~~~d~~ 366 (435)
T PRK05137 298 SPDGSQIVFESDRS-GSPQLYVMNADGSN---------PRRISFGGGRYSTPVWSPRGDLIAFTKQGG-GQFSIGVMKPD 366 (435)
T ss_pred cCCCCEEEEEECCC-CCCeEEEEECCCCC---------eEEeecCCCcccCeEECCCCCEEEEEEcCC-CceEEEEEECC
Confidence 99999999987543 34799999998742 233333211 11235999999999987543 35689999987
Q ss_pred CCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe---eEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 404 NPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR---SVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 404 ~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~---~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
++. ..++... .......+.++|+.|++.....+. .+|+++++ +|+..+.++. .+.+..+.|+|
T Consensus 367 ~~~----~~~lt~~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl-~g~~~~~l~~-~~~~~~p~Wsp 432 (435)
T PRK05137 367 GSG----ERILTSG-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL-TGRNEREVPT-PGDASDPAWSP 432 (435)
T ss_pred CCc----eEeccCC-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC-CCCceEEccC-CCCccCcccCC
Confidence 654 2334433 222234456677788887776655 68999999 4554466664 34455555554
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.2e-17 Score=183.14 Aligned_cols=264 Identities=15% Similarity=0.158 Sum_probs=176.6
Q ss_pred eCCeEEEEEEcC--CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECC
Q psy2521 166 QENNYFYFHNKG--LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 243 (783)
Q Consensus 166 ~G~~~yy~~~~~--~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~ 243 (783)
...++.|....+ ......|+..+..++..+.++..+. .+..++|||||++|||....++. .+||++|++
T Consensus 161 f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~-------~~~~p~wSpDG~~la~~s~~~~~--~~l~~~~l~ 231 (430)
T PRK00178 161 FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSRE-------PILSPRWSPDGKRIAYVSFEQKR--PRIFVQNLD 231 (430)
T ss_pred ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCC-------ceeeeeECCCCCEEEEEEcCCCC--CEEEEEECC
Confidence 455676765433 2345678887764444555554322 25678999999999999876543 689999999
Q ss_pred CCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEE
Q psy2521 244 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 323 (783)
Q Consensus 244 tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~ 323 (783)
+|+....+........+.|||||+.|+|+... ....+||++++.++.. ..+.... .....+.
T Consensus 232 ~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~-------------~g~~~Iy~~d~~~~~~--~~lt~~~---~~~~~~~ 293 (430)
T PRK00178 232 TGRREQITNFEGLNGAPAWSPDGSKLAFVLSK-------------DGNPEIYVMDLASRQL--SRVTNHP---AIDTEPF 293 (430)
T ss_pred CCCEEEccCCCCCcCCeEECCCCCEEEEEEcc-------------CCCceEEEEECCCCCe--EEcccCC---CCcCCeE
Confidence 99765544322223579999999999998732 1235799999887542 2233221 2234688
Q ss_pred EecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcC
Q psy2521 324 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINL 402 (783)
Q Consensus 324 ~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~ 402 (783)
|||||++|+|.+.+. ....||++++.+|. ...+..... .....|+|||+.|+|.+..++ .+.|+.+|+
T Consensus 294 ~spDg~~i~f~s~~~-g~~~iy~~d~~~g~---------~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~-~~~l~~~dl 362 (430)
T PRK00178 294 WGKDGRTLYFTSDRG-GKPQIYKVNVNGGR---------AERVTFVGNYNARPRLSADGKTLVMVHRQDG-NFHVAAQDL 362 (430)
T ss_pred ECCCCCEEEEEECCC-CCceEEEEECCCCC---------EEEeecCCCCccceEECCCCCEEEEEEccCC-ceEEEEEEC
Confidence 999999999987553 34789999998742 222322211 122369999999999876543 567999999
Q ss_pred CCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 403 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 403 ~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
+++. .+.+. +.... ....+.++|+.+++....++...|+++++ +|+..+.++.+.|.+..+++++
T Consensus 363 ~tg~---~~~lt-~~~~~-~~p~~spdg~~i~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~ws~ 427 (430)
T PRK00178 363 QRGS---VRILT-DTSLD-ESPSVAPNGTMLIYATRQQGRGVLMLVSI-NGRVRLPLPTAQGEVREPSWSP 427 (430)
T ss_pred CCCC---EEEcc-CCCCC-CCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCC
Confidence 8765 34444 33122 23456667788999988888899999999 6776567776666665666554
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.6e-17 Score=179.63 Aligned_cols=260 Identities=13% Similarity=0.091 Sum_probs=174.4
Q ss_pred CeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc
Q psy2521 168 NNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 247 (783)
Q Consensus 168 ~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~ 247 (783)
+++.|....+ ....||+.+..+...+.++..+. .+..++|||||++|||....++. .+||++|+.+|+.
T Consensus 164 ~~iayv~~~~--~~~~L~~~D~dG~~~~~l~~~~~-------~v~~p~wSPDG~~la~~s~~~~~--~~I~~~dl~~g~~ 232 (427)
T PRK02889 164 TRIAYVIKTG--NRYQLQISDADGQNAQSALSSPE-------PIISPAWSPDGTKLAYVSFESKK--PVVYVHDLATGRR 232 (427)
T ss_pred cEEEEEEccC--CccEEEEECCCCCCceEeccCCC-------CcccceEcCCCCEEEEEEccCCC--cEEEEEECCCCCE
Confidence 5666665433 34678887764444455554332 25678999999999999876443 6799999999986
Q ss_pred ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC
Q psy2521 248 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 327 (783)
Q Consensus 248 ~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD 327 (783)
...+........++|||||+.|+|+... ....+||..++.+... ..+... ......+.||||
T Consensus 233 ~~l~~~~g~~~~~~~SPDG~~la~~~~~-------------~g~~~Iy~~d~~~~~~--~~lt~~---~~~~~~~~wSpD 294 (427)
T PRK02889 233 RVVANFKGSNSAPAWSPDGRTLAVALSR-------------DGNSQIYTVNADGSGL--RRLTQS---SGIDTEPFFSPD 294 (427)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEcc-------------CCCceEEEEECCCCCc--EECCCC---CCCCcCeEEcCC
Confidence 6544222223679999999999998732 1235799888865432 222221 122346889999
Q ss_pred CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 328 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 328 Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
|++|++.+.++ ...+||.+++.++. .+.+..... .....|+|||++|++.++.+. .+.|+.+|+.++.
T Consensus 295 G~~l~f~s~~~-g~~~Iy~~~~~~g~---------~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g-~~~I~v~d~~~g~ 363 (427)
T PRK02889 295 GRSIYFTSDRG-GAPQIYRMPASGGA---------AQRVTFTGSYNTSPRISPDGKLLAYISRVGG-AFKLYVQDLATGQ 363 (427)
T ss_pred CCEEEEEecCC-CCcEEEEEECCCCc---------eEEEecCCCCcCceEECCCCCEEEEEEccCC-cEEEEEEECCCCC
Confidence 99999986543 34789999987742 222322111 112369999999998876543 4689999998765
Q ss_pred CCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 407 EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 407 ~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
.+.+.... . .....+.++++.|++.....+...|+++++ +|+..+.++.+.|.+..++|+|
T Consensus 364 ---~~~lt~~~-~-~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 364 ---VTALTDTT-R-DESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred ---eEEccCCC-C-ccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCC
Confidence 34444332 2 223456677788999998889899999999 7877677777667776666665
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.7e-17 Score=180.15 Aligned_cols=267 Identities=13% Similarity=0.104 Sum_probs=176.5
Q ss_pred cEEeCCeEEEEEEcC--CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 163 PQRQENNYFYFHNKG--LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 163 p~~~G~~~yy~~~~~--~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
+-.-+.+.+|....+ +.....||+.+..+...+.|+..+ ..+..++|||||++|+|....+|. .+||++
T Consensus 163 ~g~f~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~-------~~v~~p~wSpDg~~la~~s~~~~~--~~l~~~ 233 (433)
T PRK04922 163 PGAFWTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSA-------EPILSPAWSPDGKKLAYVSFERGR--SAIYVQ 233 (433)
T ss_pred CCcccceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCC-------CccccccCCCCCCEEEEEecCCCC--cEEEEE
Confidence 334456677776543 233567888876444455555432 125678999999999999766553 689999
Q ss_pred ECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEE
Q psy2521 241 DVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGL 320 (783)
Q Consensus 241 Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~ 320 (783)
|+.+|+....+........+.|||||+.|+|+...+ ...+||++++.++.. ..+... .....
T Consensus 234 dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~-------------g~~~Iy~~d~~~g~~--~~lt~~---~~~~~ 295 (433)
T PRK04922 234 DLATGQRELVASFRGINGAPSFSPDGRRLALTLSRD-------------GNPEIYVMDLGSRQL--TRLTNH---FGIDT 295 (433)
T ss_pred ECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCC-------------CCceEEEEECCCCCe--EECccC---CCCcc
Confidence 999998655442222235789999999999987321 235799999977542 222222 11234
Q ss_pred EEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc-cceeEEEEeeCCEEEEEECCCCCCceEEE
Q psy2521 321 HSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-DHHHEIIANNGPELIVKTTKNAPKGKVVT 399 (783)
Q Consensus 321 ~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~t~~~~~~~~L~~ 399 (783)
.+.|||||++|++.+.+. ...+||++++.++. ...++... ......|+|||+.|+|.+.. ...+.|+.
T Consensus 296 ~~~~spDG~~l~f~sd~~-g~~~iy~~dl~~g~---------~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~-~~~~~I~v 364 (433)
T PRK04922 296 EPTWAPDGKSIYFTSDRG-GRPQIYRVAASGGS---------AERLTFQGNYNARASVSPDGKKIAMVHGS-GGQYRIAV 364 (433)
T ss_pred ceEECCCCCEEEEEECCC-CCceEEEEECCCCC---------eEEeecCCCCccCEEECCCCCEEEEEECC-CCceeEEE
Confidence 689999999999987653 34689999997742 22233211 11123699999999998764 34568999
Q ss_pred EcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 400 INLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 400 ~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
+++.++. .+.+. +.. ......+..+|+.|++.....+...|+++++ +|+..+.++.+.|.+..++|+|
T Consensus 365 ~d~~~g~---~~~Lt-~~~-~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~-~g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 365 MDLSTGS---VRTLT-PGS-LDESPSFAPNGSMVLYATREGGRGVLAAVST-DGRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred EECCCCC---eEECC-CCC-CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEcccCCCCCCCCccCC
Confidence 9997765 34443 332 2223456667778888888888899999999 6766677766555555555543
|
|
| >TIGR01840 esterase_phb esterase, PHB depolymerase family | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-17 Score=165.47 Aligned_cols=195 Identities=11% Similarity=0.102 Sum_probs=131.0
Q ss_pred EEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh--HHhhccccCCcChHHH
Q psy2521 541 MYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED--WHNAGRLLKKQNCFDD 618 (783)
Q Consensus 541 ~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~--~~~~g~~~~~~~~~~D 618 (783)
++++.|++. +++.|+||++||+.+..........+..++++.||+|+++|+||++..+.. |..............|
T Consensus 1 ~~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 1 MYVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CEEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 467888874 468899999999876543322111234556667999999999997654433 3332221223345788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHH
Q psy2521 619 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFH 698 (783)
Q Consensus 619 ~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~ 698 (783)
+...+++++++..+|++||+|+|+|+||++++.++.++|++|+++++.+|..-...... . ... .....+.....+.
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~-~--~~~-~~~~~~~~~~~~~ 154 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSS-I--SAT-PQMCTAATAASVC 154 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccc-h--hhH-hhcCCCCCHHHHH
Confidence 88999999988779999999999999999999999999999999988887542111000 0 000 1111122222222
Q ss_pred HH-HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 699 NL-LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 699 ~~-~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
.+ ..... ... ...|+++|+||..|+.||+..+.+++++|++..
T Consensus 155 ~~~~~~~~--~~~-----~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~~ 198 (212)
T TIGR01840 155 RLVRGMQS--EYN-----GPTPIMSVVHGDADYTVLPGNADEIRDAMLKVY 198 (212)
T ss_pred HHHhccCC--ccc-----CCCCeEEEEEcCCCceeCcchHHHHHHHHHHhc
Confidence 22 22111 111 345668999999999999999999999999873
|
This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. |
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.2e-16 Score=174.22 Aligned_cols=206 Identities=14% Similarity=0.137 Sum_probs=149.0
Q ss_pred cCCcEEeCCe-EEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEE
Q psy2521 160 YSAPQRQENN-YFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238 (783)
Q Consensus 160 ~~~p~~~G~~-~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~ 238 (783)
.+.++++|++ +||+.+.++ .+.||+.+..+++.+.|.+.... ...+.|||||++|+|+.+..|+ .+||
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~--~~~Iyv~dl~tg~~~~lt~~~g~-------~~~~~~SPDG~~la~~~~~~g~--~~Iy 260 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGER--KPTLYKYNLYTGKKEKIASSQGM-------LVVSDVSKDGSKLLLTMAPKGQ--PDIY 260 (419)
T ss_pred eEEECCCCCcEEEEEEccCC--CCEEEEEECCCCcEEEEecCCCc-------EEeeEECCCCCEEEEEEccCCC--cEEE
Confidence 4677899986 788777643 35899998777777777763221 3457799999999999988664 7899
Q ss_pred EEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCee
Q psy2521 239 IKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL 318 (783)
Q Consensus 239 v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~ 318 (783)
++|+++|+..+++........+.|||||++|+|++.. ....+||++++.++..+ ++++.. .+
T Consensus 261 ~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr-------------~g~~~Iy~~dl~~g~~~-rlt~~g----~~ 322 (419)
T PRK04043 261 LYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDR-------------LGYPNIFMKKLNSGSVE-QVVFHG----KN 322 (419)
T ss_pred EEECCCCcEEEcccCCCccCccEECCCCCEEEEEECC-------------CCCceEEEEECCCCCeE-eCccCC----Cc
Confidence 9999999877766544333578999999999999832 23458999999876432 233321 12
Q ss_pred EEEEEEecCCcEEEEEEecCC-----CCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCC
Q psy2521 319 GLHSEVTDCGRYLLVSTSNNT-----QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAP 393 (783)
Q Consensus 319 ~~~~~~SpDGk~l~~~~~~~~-----~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~ 393 (783)
...|||||++|++...... ...+|+++|+++|. .+.++.+.......|+|||+.|+|.++. +.
T Consensus 323 --~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---------~~~LT~~~~~~~p~~SPDG~~I~f~~~~-~~ 390 (419)
T PRK04043 323 --NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY---------IRRLTANGVNQFPRFSSDGGSIMFIKYL-GN 390 (419)
T ss_pred --CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC---------eEECCCCCCcCCeEECCCCCEEEEEEcc-CC
Confidence 2589999999999876532 12689999998852 3344443222334699999999999876 44
Q ss_pred CceEEEEcCCCCC
Q psy2521 394 KGKVVTINLNNPC 406 (783)
Q Consensus 394 ~~~L~~~d~~~~~ 406 (783)
...|+.+++++..
T Consensus 391 ~~~L~~~~l~g~~ 403 (419)
T PRK04043 391 QSALGIIRLNYNK 403 (419)
T ss_pred cEEEEEEecCCCe
Confidence 5679999998754
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.7e-16 Score=170.74 Aligned_cols=251 Identities=14% Similarity=0.142 Sum_probs=168.9
Q ss_pred EEECCCCcEEEEEEecCCCc----eEEEEEEECCCCccccccccccccCeeEEeeCCCE--EEEEEeecCCCCCCCCccc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSD----WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKG--FFYNQYCDINGTADGTETT 287 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d----~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~--l~y~~~~~~~~~~~g~~~~ 287 (783)
..++ +++|||+....+.+ .+.||++|.+++...+++........+.|||||++ |+|++...
T Consensus 142 ~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~----------- 208 (428)
T PRK01029 142 PGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL----------- 208 (428)
T ss_pred Cccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC-----------
Confidence 4445 99999998765432 46899999999988777765444468999999988 66677432
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEE--ECCCCCCCcccCCCCcee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYF--DLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~--dl~~g~~~~l~~~~~~~~ 365 (783)
...+||++++.++... .+...+. ....+.|||||++|++..... ...++|+. ++.++.. ...+.
T Consensus 209 --g~~~I~~~~l~~g~~~--~lt~~~g---~~~~p~wSPDG~~Laf~s~~~-g~~di~~~~~~~~~g~~------g~~~~ 274 (428)
T PRK01029 209 --GVPKIFLGSLENPAGK--KILALQG---NQLMPTFSPRKKLLAFISDRY-GNPDLFIQSFSLETGAI------GKPRR 274 (428)
T ss_pred --CCceEEEEECCCCCce--EeecCCC---CccceEECCCCCEEEEEECCC-CCcceeEEEeecccCCC------CcceE
Confidence 2358999999876433 3433322 234689999999999987542 33567774 5544211 11233
Q ss_pred eecCcc-c-eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 366 VIPGMD-H-HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 366 l~~~~~-~-~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
++.+.. . ....|+|||++|+|.+++++ ..+||.++++.... ..+.+. ..........++++|+.|++....++..
T Consensus 275 lt~~~~~~~~~p~wSPDG~~Laf~s~~~g-~~~ly~~~~~~~g~-~~~~lt-~~~~~~~~p~wSPDG~~Laf~~~~~g~~ 351 (428)
T PRK01029 275 LLNEAFGTQGNPSFSPDGTRLVFVSNKDG-RPRIYIMQIDPEGQ-SPRLLT-KKYRNSSCPAWSPDGKKIAFCSVIKGVR 351 (428)
T ss_pred eecCCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECccccc-ceEEec-cCCCCccceeECCCCCEEEEEEcCCCCc
Confidence 443321 1 22369999999999987654 45799998754221 123333 3323334556778888899988888888
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|+++|+.+|+. +.++...+.+..+.+++|++.++|.... .....+|.+|+
T Consensus 352 ~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~-~g~~~L~~vdl 402 (428)
T PRK01029 352 QICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLVYSAGN-SNESELYLISL 402 (428)
T ss_pred EEEEEECCCCCe-EEccCCCCCccceEECCCCCEEEEEECC-CCCceEEEEEC
Confidence 999999976665 6666443445567889999988887654 33468999998
|
|
| >PRK10162 acetyl esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=170.88 Aligned_cols=215 Identities=13% Similarity=0.044 Sum_probs=147.2
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHHHHHHH-cCCEEEEEecCCCCCCCCh
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLR-HFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~ 601 (783)
..++.+.+++.+| .|++.++.|+. ...|+|||+|||....... .+.. ....|+ +.|+.|+.+|||...+..
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~-~~~~la~~~g~~Vv~vdYrlape~~- 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDR-IMRLLASYSGCTVIGIDYTLSPEAR- 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhH-HHHHHHHHcCCEEEEecCCCCCCCC-
Confidence 4577888888888 59999999863 3469999999986443332 2333 334444 359999999999866421
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC------CCceeEEEEcCCcchh
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDM 672 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~lf~a~i~~~~~~d~ 672 (783)
....++|+.++++|+.+. -.+|++||+|+|+|+||.|++.++.+. +..++++++.+|++|+
T Consensus 128 ----------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 128 ----------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ----------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 123478999999999764 246899999999999999999888642 3568899999999886
Q ss_pred hhcccccccccchhhhCCC---CCHHHHHHHH---------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHH
Q psy2521 673 LRFNKFTIAYYSESEFGSP---NNKTHFHNLL---------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKF 740 (783)
Q Consensus 673 ~~~~~~~~~~~~~~~~g~p---~~~~~~~~~~---------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~ 740 (783)
.... .+ ..++.. -..+.++.+. ..+|+.......-....||++|++|+.|..+ .++..|
T Consensus 198 ~~~~------s~-~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~--de~~~~ 268 (318)
T PRK10162 198 RDSV------SR-RLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLL--DDSRLL 268 (318)
T ss_pred CCCh------hH-HHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCc--ChHHHH
Confidence 3211 00 111111 0111111110 1233322110000024688999999999876 589999
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 741 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 741 ~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+++|+++ |.+++++++++..|+|.
T Consensus 269 ~~~L~~a-------Gv~v~~~~~~g~~H~f~ 292 (318)
T PRK10162 269 YQTLAAH-------QQPCEFKLYPGTLHAFL 292 (318)
T ss_pred HHHHHHc-------CCCEEEEEECCCceehh
Confidence 9999999 99999999999999985
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-15 Score=169.86 Aligned_cols=243 Identities=12% Similarity=0.110 Sum_probs=169.8
Q ss_pred CCcEEEEEEecCCCc--eEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEE
Q psy2521 219 NGKHFAYCLSKSGSD--WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 296 (783)
Q Consensus 219 DG~~la~~~~~~G~d--~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~ 296 (783)
=..+|||....+|.+ ..+||++|.+++.....+........+.|||||+.|+|++... ....||+
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~-------------g~~~i~~ 230 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN-------------GRPRVYL 230 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC-------------CCCEEEE
Confidence 456899998876643 5799999998877666554443346899999999999998432 2358999
Q ss_pred EEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-E
Q psy2521 297 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-E 375 (783)
Q Consensus 297 ~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~ 375 (783)
+++.++.. ..+...+. ....+.|||||+.|++..... ...+||++|++++. ..+++....... .
T Consensus 231 ~dl~~g~~--~~l~~~~g---~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~Lt~~~~~~~~~ 295 (435)
T PRK05137 231 LDLETGQR--ELVGNFPG---MTFAPRFSPDGRKVVMSLSQG-GNTDIYTMDLRSGT---------TTRLTDSPAIDTSP 295 (435)
T ss_pred EECCCCcE--EEeecCCC---cccCcEECCCCCEEEEEEecC-CCceEEEEECCCCc---------eEEccCCCCccCce
Confidence 99977543 23332221 234789999999999886543 34799999998842 233333222222 3
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
.|+|||++|+|.+++.+ ..+||.+|++++. .+.+.... .......++++|+.|++.....+..+|+++|+. |+.
T Consensus 296 ~~spDG~~i~f~s~~~g-~~~Iy~~d~~g~~---~~~lt~~~-~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~-~~~ 369 (435)
T PRK05137 296 SYSPDGSQIVFESDRSG-SPQLYVMNADGSN---PRRISFGG-GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD-GSG 369 (435)
T ss_pred eEcCCCCEEEEEECCCC-CCeEEEEECCCCC---eEEeecCC-CcccCeEECCCCCEEEEEEcCCCceEEEEEECC-CCc
Confidence 69999999999987654 4579999988765 45554432 333344567777888888877777899999994 444
Q ss_pred eeeecCCCeEEEeeeccccccEEEEEEecCCCC--ceEEEEeC
Q psy2521 456 LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQP--GTIYHCNI 496 (783)
Q Consensus 456 ~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P--~~vy~~d~ 496 (783)
.+.++.. ..+..++++||++.++|.......+ ..+|.+|+
T Consensus 370 ~~~lt~~-~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 370 ERILTSG-FLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred eEeccCC-CCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 4556543 2455678899999998877655443 57999998
|
|
| >PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=172.70 Aligned_cols=232 Identities=22% Similarity=0.225 Sum_probs=151.7
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
...+.+..+.|.+.+|.+|.++++.|++. .++.|+||.+||..+....+ . ....|. .+|++++.+|.||-|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~~~--~-~~~~~a-~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSGDP--F-DLLPWA-AAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--GGGH--H-HHHHHH-HTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCCCCc--c-cccccc-cCCeEEEEecCCCCCCCC
Confidence 34678889999999999999999999953 58999999999965553221 1 123444 479999999999976433
Q ss_pred hhHHh-----------hccccCC-----cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEE
Q psy2521 601 EDWHN-----------AGRLLKK-----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAAL 664 (783)
Q Consensus 601 ~~~~~-----------~g~~~~~-----~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i 664 (783)
++... .|..... ...+.|.+.++++|.....+|++||+++|.|.||.++++++...| .+++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 32211 1111101 134799999999999999999999999999999999999999987 479999
Q ss_pred EcCCc-chhhhcccccc-cccch-----hhhCCC--C-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 665 ILVGA-LDMLRFNKFTI-AYYSE-----SEFGSP--N-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 665 ~~~~~-~d~~~~~~~~~-~~~~~-----~~~g~p--~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
+.+|+ .|+.+...... ...|. ..+.++ . .++.++.|.-++..+..+. +++| +|+..|..|+.|||
T Consensus 204 ~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~r----i~~p-vl~~~gl~D~~cPP 278 (320)
T PF05448_consen 204 ADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARR----IKCP-VLFSVGLQDPVCPP 278 (320)
T ss_dssp EESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG------SE-EEEEEETT-SSS-H
T ss_pred ecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHH----cCCC-EEEEEecCCCCCCc
Confidence 99995 46554332221 11111 111222 2 3445666666666655555 7888 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
.-....+.+|. .+.++.+|+..||......
T Consensus 279 ~t~fA~yN~i~----------~~K~l~vyp~~~He~~~~~ 308 (320)
T PF05448_consen 279 STQFAAYNAIP----------GPKELVVYPEYGHEYGPEF 308 (320)
T ss_dssp HHHHHHHCC------------SSEEEEEETT--SSTTHHH
T ss_pred hhHHHHHhccC----------CCeeEEeccCcCCCchhhH
Confidence 98887777764 2479999999999876544
|
Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F .... |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.3e-15 Score=168.35 Aligned_cols=264 Identities=13% Similarity=0.065 Sum_probs=169.7
Q ss_pred cCCcEEeCCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEE
Q psy2521 160 YSAPQRQENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~-~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~ 238 (783)
.+.+-.-+.++.|..... +.....||+.+..+...+.|...+ ..+..++|||||++|||+...++ ..+|+
T Consensus 161 tg~~g~f~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~-------~~v~~p~wSPDG~~la~~s~~~~--~~~i~ 231 (429)
T PRK01742 161 TAIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSS-------QPLMSPAWSPDGSKLAYVSFENK--KSQLV 231 (429)
T ss_pred cCCCCccCCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCC-------CccccceEcCCCCEEEEEEecCC--CcEEE
Confidence 344556678887776543 233477888775444445554422 23577999999999999876543 37899
Q ss_pred EEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCee
Q psy2521 239 IKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL 318 (783)
Q Consensus 239 v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~ 318 (783)
++|+.+|+....+........++|||||+.|+|+...+ ...+||.+++.+... ..+... ...
T Consensus 232 i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~-------------g~~~Iy~~d~~~~~~--~~lt~~---~~~ 293 (429)
T PRK01742 232 VHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKD-------------GVLNIYVMGANGGTP--SQLTSG---AGN 293 (429)
T ss_pred EEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecC-------------CcEEEEEEECCCCCe--EeeccC---CCC
Confidence 99999987544332211225799999999999987321 224689888865432 223222 222
Q ss_pred EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEE
Q psy2521 319 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVV 398 (783)
Q Consensus 319 ~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~ 398 (783)
...+.|||||++|++.+.+. ...+||.++..++. . .++... .....|+|||+.|++.+. ..++
T Consensus 294 ~~~~~wSpDG~~i~f~s~~~-g~~~I~~~~~~~~~---------~-~~l~~~-~~~~~~SpDG~~ia~~~~-----~~i~ 356 (429)
T PRK01742 294 NTEPSWSPDGQSILFTSDRS-GSPQVYRMSASGGG---------A-SLVGGR-GYSAQISADGKTLVMING-----DNVV 356 (429)
T ss_pred cCCEEECCCCCEEEEEECCC-CCceEEEEECCCCC---------e-EEecCC-CCCccCCCCCCEEEEEcC-----CCEE
Confidence 35789999999999886543 34789999987631 1 122211 111259999999998754 3588
Q ss_pred EEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 399 TINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 399 ~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
.+|+.++. ++.+.... ......+.++++.|++...+++...+++++. +|+..+.|+...|.+..+.|+|
T Consensus 357 ~~Dl~~g~---~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~-~G~~~~~l~~~~g~~~~p~wsp 425 (429)
T PRK01742 357 KQDLTSGS---TEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSA-DGRFKARLPGSDGQVKFPAWSP 425 (429)
T ss_pred EEECCCCC---eEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCceEEccCCCCCCCCcccCC
Confidence 89987765 34443222 1122335667677777777666666778887 7887778875556665666665
|
|
| >PRK05077 frsA fermentation/respiration switch protein; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=172.19 Aligned_cols=217 Identities=14% Similarity=0.046 Sum_probs=141.9
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
.+..+++.++..||..++++++.|+. +++.|+||+. ||.+......|.. ....|+++||+|+++|+||.|+...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~-gG~~~~~~~~~~~-~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVC-GGLDSLQTDYYRL-FRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEe-CCcccchhhhHHH-HHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 44688999999899899999999873 4678888765 5544432223332 3445666799999999999664321
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--cc-
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--FT- 679 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~--~~- 679 (783)
+. ..........+++++|.....+|++||+++|+|+||++++.++..+|++++++|+..|+++-..... ..
T Consensus 239 ~~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 10 0111222335788999998889999999999999999999999888999999999998875221100 00
Q ss_pred c----cccchhhhCCCC-CHH-HHHHHHhcCccc--CCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCC
Q psy2521 680 I----AYYSESEFGSPN-NKT-HFHNLLSYSPLH--NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 751 (783)
Q Consensus 680 ~----~~~~~~~~g~p~-~~~-~~~~~~~~sp~~--~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 751 (783)
. ...+...+|.+. +.+ ....+..++.-. .+.. .++.| +|+++|++|.+||+.++..+++...
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~---~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~------ 382 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGR---RCPTP-MLSGYWKNDPFSPEEDSRLIASSSA------ 382 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhcc---CCCCc-EEEEecCCCCCCCHHHHHHHHHhCC------
Confidence 0 001112234432 222 222333443211 1111 26677 9999999999999999987655443
Q ss_pred CCCCCcEEEEEeCCC
Q psy2521 752 PYQKNPLLLRVEQDA 766 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~ 766 (783)
...+.+++++
T Consensus 383 -----~~~l~~i~~~ 392 (414)
T PRK05077 383 -----DGKLLEIPFK 392 (414)
T ss_pred -----CCeEEEccCC
Confidence 2357778876
|
|
| >PLN02298 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=3e-16 Score=169.82 Aligned_cols=231 Identities=13% Similarity=0.094 Sum_probs=147.9
Q ss_pred CCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 520 ~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
.+..+..+..++.+.||.++.+....|.+. ..+.|+||++||..... ...|.. ....|.++||.|+.+|+||.|..
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~-~~~~~~-~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDI-SWTFQS-TAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCc-ceehhH-HHHHHHhCCCEEEEecCCCCCCC
Confidence 345566677788889999999988877542 24578999999985432 233332 23445557999999999996643
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-- 677 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-- 677 (783)
.. ..+....-....+|+.+++++|......+..+++|+|||+||.+++.++.++|++++++|+.+|+.++.....
T Consensus 102 ~~---~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EG---LRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CC---ccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 21 1111112223468899999999765434445799999999999999999999999999999998765322100
Q ss_pred c--cccccchhhhC-----CCC--------CHHHHHHHHhcCcc----------------------cCCCCCCCCCcCCc
Q psy2521 678 F--TIAYYSESEFG-----SPN--------NKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPA 720 (783)
Q Consensus 678 ~--~~~~~~~~~~g-----~p~--------~~~~~~~~~~~sp~----------------------~~v~~~~~~~~~P~ 720 (783)
. .....+...+. .+. .......+...+|. ..+.. +..|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P- 253 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKD----VSIP- 253 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhh----cCCC-
Confidence 0 00000000000 000 00000111111221 11222 5667
Q ss_pred EEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 721 TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 721 ~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+||+||..|..||+.++.++++++... ...+.+++++||...
T Consensus 254 vLii~G~~D~ivp~~~~~~l~~~i~~~---------~~~l~~~~~a~H~~~ 295 (330)
T PLN02298 254 FIVLHGSADVVTDPDVSRALYEEAKSE---------DKTIKIYDGMMHSLL 295 (330)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHhccC---------CceEEEcCCcEeeee
Confidence 999999999999999999998887533 357888999999974
|
|
| >COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-16 Score=156.20 Aligned_cols=231 Identities=18% Similarity=0.184 Sum_probs=161.2
Q ss_pred CCCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCC
Q psy2521 519 FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE 598 (783)
Q Consensus 519 ~~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~ 598 (783)
+.....++-.++|++.+|.+|.+|++.|+.- .++.|.||..||-.+....+ . .++.|-. .||+|+.+|.||.|+
T Consensus 49 ~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g~~--~-~~l~wa~-~Gyavf~MdvRGQg~ 122 (321)
T COG3458 49 FTLPRVEVYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGGEW--H-DMLHWAV-AGYAVFVMDVRGQGS 122 (321)
T ss_pred ccCCceEEEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCCCc--c-ccccccc-cceeEEEEecccCCC
Confidence 4445668889999999999999999999863 48999999999855544322 1 2345544 699999999999665
Q ss_pred CCh------------hHHhhccccCC-----cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCcee
Q psy2521 599 LGE------------DWHNAGRLLKK-----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYG 661 (783)
Q Consensus 599 ~G~------------~~~~~g~~~~~-----~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~ 661 (783)
+-. .|+-.|..+++ ...|.|...+++-|.....+|++||++.|+|.||.|+++++...| +.+
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 521 12222222222 356999999999999999999999999999999999999999877 569
Q ss_pred EEEEcCCcchh-hhcccccccccchh-----hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH
Q psy2521 662 AALILVGALDM-LRFNKFTIAYYSES-----EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 735 (783)
Q Consensus 662 a~i~~~~~~d~-~~~~~~~~~~~~~~-----~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~ 735 (783)
++++.+|++.= .+.........+.+ ..-.|.+.+.++.|.-+.-.+-... ++.| +|+..|..|+.|||.
T Consensus 202 ~~~~~~Pfl~df~r~i~~~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~R----iK~p-vL~svgL~D~vcpPs 276 (321)
T COG3458 202 AVVADYPFLSDFPRAIELATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAAR----IKVP-VLMSVGLMDPVCPPS 276 (321)
T ss_pred cccccccccccchhheeecccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHh----hccc-eEEeecccCCCCCCh
Confidence 99999997633 22222111111111 1123444555655544443332232 6777 999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 736 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 736 ~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
-.+..+.+|.. +..+.+|+.-+|...
T Consensus 277 tqFA~yN~l~~----------~K~i~iy~~~aHe~~ 302 (321)
T COG3458 277 TQFAAYNALTT----------SKTIEIYPYFAHEGG 302 (321)
T ss_pred hhHHHhhcccC----------CceEEEeeccccccC
Confidence 88877777743 235677776668643
|
|
| >PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.3e-16 Score=161.73 Aligned_cols=189 Identities=20% Similarity=0.225 Sum_probs=130.7
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCC-CChhHHhh--ccc----cC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE-LGEDWHNA--GRL----LK 611 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~-~G~~~~~~--g~~----~~ 611 (783)
+.+++..|++. ++.|.||++|+.+|.. .+...+...|+++||.|+++|+-++.. ......+. ... ..
T Consensus 1 ~~ay~~~P~~~---~~~~~Vvv~~d~~G~~---~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG---GPRPAVVVIHDIFGLN---PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS---SSEEEEEEE-BTTBS----HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC---CCCCEEEEEcCCCCCc---hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 56788999872 6899999999998877 233345667777899999999876554 11111110 000 01
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCC
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 691 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p 691 (783)
......|+.+++++|.++..++++||+++|+|+||.++..++.+. +.++++++..|....
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------- 134 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------- 134 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------
Confidence 224568889999999999878899999999999999999998876 578999998881000
Q ss_pred CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 692 NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 692 ~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..+ .+ ...+ ++.| +|+++|++|+.+++.+..++.++|++. +.++++++|++++|||.
T Consensus 135 ~~~--~~------~~~~-------~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~y~ga~HgF~ 191 (218)
T PF01738_consen 135 PPP--LE------DAPK-------IKAP-VLILFGENDPFFPPEEVEALEEALKAA-------GVDVEVHVYPGAGHGFA 191 (218)
T ss_dssp GGH--HH------HGGG---------S--EEEEEETT-TTS-HHHHHHHHHHHHCT-------TTTEEEEEETT--TTTT
T ss_pred Ccc--hh------hhcc-------cCCC-EeecCccCCCCCChHHHHHHHHHHHhc-------CCcEEEEECCCCccccc
Confidence 000 00 0012 3445 999999999999999999999999988 88999999999999997
Q ss_pred ccchh
Q psy2521 772 KALDI 776 (783)
Q Consensus 772 ~~~~~ 776 (783)
.+...
T Consensus 192 ~~~~~ 196 (218)
T PF01738_consen 192 NPSRP 196 (218)
T ss_dssp STTST
T ss_pred CCCCc
Confidence 65543
|
Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A. |
| >COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-15 Score=153.11 Aligned_cols=197 Identities=20% Similarity=0.253 Sum_probs=150.5
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC--C----
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL--G---- 600 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~--G---- 600 (783)
+.+.+++.| .++++++.+|++. ++.|.||.+|+-+|... ....+...|+..||++++||+-+..+. .
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~---~~~P~VIv~hei~Gl~~---~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA---GGFPGVIVLHEIFGLNP---HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC---CCCCEEEEEecccCCch---HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 456777777 8899999999873 44599999999988775 344556777778999999998652211 1
Q ss_pred hhHHhhc--cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc
Q psy2521 601 EDWHNAG--RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF 678 (783)
Q Consensus 601 ~~~~~~g--~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~ 678 (783)
......+ ..........|+.++++||..++.++++||+++|+|+||.+++.++.+.| .++|+++..|..--
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~------ 148 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA------ 148 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC------
Confidence 1122221 01111567899999999999998899999999999999999999999877 77999998874310
Q ss_pred cccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 679 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 679 ~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
.+ . ....+ +++| +|+..|..|+.+|.....++.+++.+. +..+
T Consensus 149 ----~~---------~------------~~~~~----~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~-------~~~~ 191 (236)
T COG0412 149 ----DD---------T------------ADAPK----IKVP-VLLHLAGEDPYIPAADVDALAAALEDA-------GVKV 191 (236)
T ss_pred ----Cc---------c------------ccccc----ccCc-EEEEecccCCCCChhHHHHHHHHHHhc-------CCCe
Confidence 00 0 00122 4566 999999999999999999999999988 7789
Q ss_pred EEEEeCCCCccCCccc
Q psy2521 759 LLRVEQDAGHGQGKAL 774 (783)
Q Consensus 759 ~l~~~~~~gHg~~~~~ 774 (783)
.+.+|+++.|+|..+.
T Consensus 192 ~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 192 DLEIYPGAGHGFANDR 207 (236)
T ss_pred eEEEeCCCccccccCC
Confidence 9999999999998653
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.4e-14 Score=158.61 Aligned_cols=240 Identities=15% Similarity=0.136 Sum_probs=162.6
Q ss_pred cEEEEEEecCC-CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEc
Q psy2521 221 KHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 299 (783)
Q Consensus 221 ~~la~~~~~~G-~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~l 299 (783)
++|||.....+ ...++|+++|.+++.....+........+.|||||+.|+|++... ...+||++++
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~-------------g~~~i~i~dl 230 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-------------GRSALVIQTL 230 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecC-------------CCcEEEEEEC
Confidence 78999987543 335799999999887666555443446899999999999987421 2347999998
Q ss_pred CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce-eEEEE
Q psy2521 300 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HEIIA 378 (783)
Q Consensus 300 gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~-~~~~s 378 (783)
.++.. ..+...+. ....+.|||||++|++..... ...+||++|++++. ...++...... ...|+
T Consensus 231 ~~G~~--~~l~~~~~---~~~~~~~SPDG~~La~~~~~~-g~~~I~~~d~~tg~---------~~~lt~~~~~~~~~~wS 295 (429)
T PRK03629 231 ANGAV--RQVASFPR---HNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQ---------IRQVTDGRSNNTEPTWF 295 (429)
T ss_pred CCCCe--EEccCCCC---CcCCeEECCCCCEEEEEEcCC-CCcEEEEEECCCCC---------EEEccCCCCCcCceEEC
Confidence 76532 23333222 224689999999999876542 34689999998742 23333332222 23699
Q ss_pred eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeee
Q psy2521 379 NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 458 (783)
Q Consensus 379 ~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~ 458 (783)
|||++|+|.+++++ ..+||.++++++. .+.+.... .......++++|+.|++....++...|+++|+++|+. +.
T Consensus 296 PDG~~I~f~s~~~g-~~~Iy~~d~~~g~---~~~lt~~~-~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~ 369 (429)
T PRK03629 296 PDSQNLAYTSDQAG-RPQVYKVNINGGA---PQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QV 369 (429)
T ss_pred CCCCEEEEEeCCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EE
Confidence 99999999988754 4579999998765 34454333 2222344567778888888777778899999976764 66
Q ss_pred ecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 459 FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 459 l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+.. .....++++||+..+++....- .-..++.+++
T Consensus 370 Lt~~-~~~~~p~~SpDG~~i~~~s~~~-~~~~l~~~~~ 405 (429)
T PRK03629 370 LTDT-FLDETPSIAPNGTMVIYSSSQG-MGSVLNLVST 405 (429)
T ss_pred eCCC-CCCCCceECCCCCEEEEEEcCC-CceEEEEEEC
Confidence 6643 2233567889998888765432 2345788887
|
|
| >COG0657 Aes Esterase/lipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-15 Score=162.19 Aligned_cols=209 Identities=20% Similarity=0.203 Sum_probs=149.3
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc-HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS-ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
...++..+++.++.| +.+...+.|+|||+|||.......... .....++...|++|+.+|||-..+.
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 445667789999998 333456789999999996665444433 4445666678999999999986654
Q ss_pred CCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhhhccccccccc
Q psy2521 611 KKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFNKFTIAYY 683 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~~~~~~~~~~~ 683 (783)
.-...++|+.+++.|+.++. -+||++|+++|+|+||.|++.++.+..+ ...+.+..+|.+|... .. . .
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~-~---~ 199 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SA-A---S 199 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cc-c---c
Confidence 22345789999999998763 4899999999999999999988865432 4688899999998875 10 0 0
Q ss_pred chhhhCC--CCCHHHHH--HH------------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhh
Q psy2521 684 SESEFGS--PNNKTHFH--NL------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747 (783)
Q Consensus 684 ~~~~~g~--p~~~~~~~--~~------------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~ 747 (783)
+ ..++. .-...... .. ...||+..-.- ...||++|++|+.|...+ ++..++++|+++
T Consensus 200 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~----~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~a 272 (312)
T COG0657 200 L-PGYGEADLLDAAAILAWFADLYLGAAPDREDPEASPLASDDL----SGLPPTLIQTAEFDPLRD--EGEAYAERLRAA 272 (312)
T ss_pred h-hhcCCccccCHHHHHHHHHHHhCcCccccCCCccCccccccc----cCCCCEEEEecCCCcchh--HHHHHHHHHHHc
Confidence 0 11111 00000000 00 12344433221 237889999999999887 899999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 748 IGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 748 ~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
|.+++++.+++..|+|.
T Consensus 273 -------gv~~~~~~~~g~~H~f~ 289 (312)
T COG0657 273 -------GVPVELRVYPGMIHGFD 289 (312)
T ss_pred -------CCeEEEEEeCCcceecc
Confidence 99999999999999984
|
|
| >KOG1552|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=147.98 Aligned_cols=201 Identities=18% Similarity=0.239 Sum_probs=146.4
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHH-HcCCEEEEEecCCCCCCCChhH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
..+-+..+++.|..+-...+.|.. ..+++|||.||. +.+.+-...+..-| ...++.++..||+| ||.+
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGN---a~Dlgq~~~~~~~l~~~ln~nv~~~DYSG---yG~S- 102 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGN---AADLGQMVELFKELSIFLNCNVVSYDYSG---YGRS- 102 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCc---ccchHHHHHHHHHHhhcccceEEEEeccc---cccc-
Confidence 455566677788888777777653 357999999997 22222111121122 23589999999999 4422
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc-cccc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF-TIAY 682 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~-~~~~ 682 (783)
.|. ....+..+|+.++.+||.+... .+++|+++|+|+|...+..++.+.| .+|+|+.+|+++.++.... ....
T Consensus 103 --~G~-psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~~~~~ 176 (258)
T KOG1552|consen 103 --SGK-PSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPDTKTT 176 (258)
T ss_pred --CCC-cccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccCcceE
Confidence 222 2334889999999999998755 7899999999999999999999998 6999999999998886432 1111
Q ss_pred cchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 683 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 683 ~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
.|...| +-+.+|+. +.+| +||+||+.|++|++.|+.+++++.+.. ++-.+
T Consensus 177 ~~~d~f---------------~~i~kI~~----i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~----------~epl~ 226 (258)
T KOG1552|consen 177 YCFDAF---------------PNIEKISK----ITCP-VLIIHGTDDEVVDFSHGKALYERCKEK----------VEPLW 226 (258)
T ss_pred Eeeccc---------------cccCccee----ccCC-EEEEecccCceecccccHHHHHhcccc----------CCCcE
Confidence 232222 22566666 7888 999999999999999999999987654 55667
Q ss_pred eCCCCccCCc
Q psy2521 763 EQDAGHGQGK 772 (783)
Q Consensus 763 ~~~~gHg~~~ 772 (783)
..++||....
T Consensus 227 v~g~gH~~~~ 236 (258)
T KOG1552|consen 227 VKGAGHNDIE 236 (258)
T ss_pred EecCCCcccc
Confidence 7899998654
|
|
| >COG1647 Esterase/lipase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.9e-16 Score=145.70 Aligned_cols=205 Identities=16% Similarity=0.158 Sum_probs=143.0
Q ss_pred ecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHH
Q psy2521 546 RVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY 625 (783)
Q Consensus 546 p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~ 625 (783)
|+.+...+.+-.||++||..|.+.+-. ...+.|.++||.|.+|+++|+|-.++.+...+...| ++|+.++.++
T Consensus 6 p~pf~f~~G~~AVLllHGFTGt~~Dvr---~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~ 78 (243)
T COG1647 6 PKPFTFEGGNRAVLLLHGFTGTPRDVR---MLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRD 78 (243)
T ss_pred CCCeeeccCCEEEEEEeccCCCcHHHH---HHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHH
Confidence 333333344588999999888775533 345778889999999999999999988888777776 7899999999
Q ss_pred HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-cccccccch---hhhCCCCCHHHHHHHH
Q psy2521 626 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-KFTIAYYSE---SEFGSPNNKTHFHNLL 701 (783)
Q Consensus 626 l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-~~~~~~~~~---~~~g~p~~~~~~~~~~ 701 (783)
|++++| +.|++.|.||||.+++.++.++| .+++|..++-+.+.... ....--.|. ..|-.+..+..-+.|+
T Consensus 79 L~~~gy---~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~ 153 (243)
T COG1647 79 LKEAGY---DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMK 153 (243)
T ss_pred HHHcCC---CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHH
Confidence 999988 57999999999999999999998 45555554433322110 000000111 1222222222222334
Q ss_pred hcC--cc--------------cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 702 SYS--PL--------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 702 ~~s--p~--------------~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
++. |. .++.. +..| +||+.|.+|+.||...+..++..+... +.+|.+|++
T Consensus 154 ~~~~~~~~~~~~~~~~i~~~~~~~~~----I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~---------~KeL~~~e~ 219 (243)
T COG1647 154 SYKDTPMTTTAQLKKLIKDARRSLDK----IYSP-TLVVQGRQDEMVPAESANFIYDHVESD---------DKELKWLEG 219 (243)
T ss_pred HhhcchHHHHHHHHHHHHHHHhhhhh----cccc-hhheecccCCCCCHHHHHHHHHhccCC---------cceeEEEcc
Confidence 443 21 23444 5666 999999999999999999999887654 678999999
Q ss_pred CCccCCccchh
Q psy2521 766 AGHGQGKALDI 776 (783)
Q Consensus 766 ~gHg~~~~~~~ 776 (783)
+||-+.....+
T Consensus 220 SgHVIt~D~Er 230 (243)
T COG1647 220 SGHVITLDKER 230 (243)
T ss_pred CCceeecchhH
Confidence 99998754443
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.2e-14 Score=160.87 Aligned_cols=206 Identities=18% Similarity=0.180 Sum_probs=144.1
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEE
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 239 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v 239 (783)
.+.++++|.+++|..... ....||+.+..+++.+.+.+.... ...++|||||++|+|+.+.+|. .+||+
T Consensus 222 ~p~wSPDG~~La~~s~~~--g~~~L~~~dl~tg~~~~lt~~~g~-------~~~~~wSPDG~~La~~~~~~g~--~~Iy~ 290 (448)
T PRK04792 222 SPAWSPDGRKLAYVSFEN--RKAEIFVQDIYTQVREKVTSFPGI-------NGAPRFSPDGKKLALVLSKDGQ--PEIYV 290 (448)
T ss_pred CceECCCCCEEEEEEecC--CCcEEEEEECCCCCeEEecCCCCC-------cCCeeECCCCCEEEEEEeCCCC--eEEEE
Confidence 567789999999987654 347899988766666665443211 2358999999999999887665 78999
Q ss_pred EECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeE
Q psy2521 240 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 319 (783)
Q Consensus 240 ~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~ 319 (783)
+|+++|+..+.+........++|||||+.|+|++.. ....+||++++.++..+ .+.+.. .+.
T Consensus 291 ~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~-------------~g~~~Iy~~dl~~g~~~-~Lt~~g----~~~ 352 (448)
T PRK04792 291 VDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSER-------------GGKPQIYRVNLASGKVS-RLTFEG----EQN 352 (448)
T ss_pred EECCCCCeEECccCCCCccceEECCCCCEEEEEECC-------------CCCceEEEEECCCCCEE-EEecCC----CCC
Confidence 999999876655543334689999999999999732 12357999998765432 222221 123
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 399 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~ 399 (783)
..+.|||||++|++.... .....||++|++++. ...+..........|+|||+.|+|.++.++ ...|+.
T Consensus 353 ~~~~~SpDG~~l~~~~~~-~g~~~I~~~dl~~g~---------~~~lt~~~~d~~ps~spdG~~I~~~~~~~g-~~~l~~ 421 (448)
T PRK04792 353 LGGSITPDGRSMIMVNRT-NGKFNIARQDLETGA---------MQVLTSTRLDESPSVAPNGTMVIYSTTYQG-KQVLAA 421 (448)
T ss_pred cCeeECCCCCEEEEEEec-CCceEEEEEECCCCC---------eEEccCCCCCCCceECCCCCEEEEEEecCC-ceEEEE
Confidence 467899999999987654 334689999998842 222332211122369999999999887654 456999
Q ss_pred EcCCCC
Q psy2521 400 INLNNP 405 (783)
Q Consensus 400 ~d~~~~ 405 (783)
++.++.
T Consensus 422 ~~~~G~ 427 (448)
T PRK04792 422 VSIDGR 427 (448)
T ss_pred EECCCC
Confidence 998654
|
|
| >PLN02385 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-15 Score=160.89 Aligned_cols=228 Identities=14% Similarity=0.079 Sum_probs=140.4
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
.+..++.++.+.||.++.+....|.+ ..+.|+||++||..+... ..|. .....|+++||.|+++|+||.|....
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~~~-~~~~-~~~~~l~~~g~~v~~~D~~G~G~S~~- 131 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDTCT-FFFE-GIARKIASSGYGVFAMDYPGFGLSEG- 131 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCccc-hHHH-HHHHHHHhCCCEEEEecCCCCCCCCC-
Confidence 34455666777899999998888764 246799999999754332 1122 33445555699999999999654321
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-c----
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-K---- 677 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-~---- 677 (783)
..+....-....+|+.+.++.+..+...++.++.|+|||+||++++.++.++|++++++|+.+|+..+.... .
T Consensus 132 --~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 132 --LHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred --CCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH
Confidence 001111112235566667776654433455689999999999999999999999999999998865321100 0
Q ss_pred -------ccccccc-------hhh--hCCCC-----------------CHHHHHHHHhcCcc-cCCCCCCCCCcCCcEEE
Q psy2521 678 -------FTIAYYS-------ESE--FGSPN-----------------NKTHFHNLLSYSPL-HNIKVPPNNTQYPATLV 723 (783)
Q Consensus 678 -------~~~~~~~-------~~~--~g~p~-----------------~~~~~~~~~~~sp~-~~v~~~~~~~~~P~~Li 723 (783)
......+ ..+ +..+. -...++.++....+ ..+.. +..| +||
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~----i~~P-~Li 284 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE----VSLP-LLI 284 (349)
T ss_pred HHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc----CCCC-EEE
Confidence 0000000 000 00000 00001111111111 12222 5677 999
Q ss_pred EecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 724 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 724 ~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+||++|..|++.++.++++++... ...+.+++++||....
T Consensus 285 i~G~~D~vv~~~~~~~l~~~~~~~---------~~~l~~i~~~gH~l~~ 324 (349)
T PLN02385 285 LHGEADKVTDPSVSKFLYEKASSS---------DKKLKLYEDAYHSILE 324 (349)
T ss_pred EEeCCCCccChHHHHHHHHHcCCC---------CceEEEeCCCeeeccc
Confidence 999999999999999988776432 3578889999999753
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=9.1e-14 Score=155.31 Aligned_cols=238 Identities=13% Similarity=0.120 Sum_probs=161.2
Q ss_pred cEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcC
Q psy2521 221 KHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG 300 (783)
Q Consensus 221 ~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lg 300 (783)
.+|||....++ ..+|+++|.++....+.+........++|||||+.|+|++... ....||++++.
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~-------------~~~~I~~~dl~ 228 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES-------------KKPVVYVHDLA 228 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC-------------CCcEEEEEECC
Confidence 56999886544 3789999997665544443333346899999999999998431 23479999997
Q ss_pred CCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEe
Q psy2521 301 TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIAN 379 (783)
Q Consensus 301 t~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~ 379 (783)
++.. ..+...+ .....+.|||||++|++..... ...+||++|+.++. ...+........ ..|+|
T Consensus 229 ~g~~--~~l~~~~---g~~~~~~~SPDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~~~~~~~~~~wSp 293 (427)
T PRK02889 229 TGRR--RVVANFK---GSNSAPAWSPDGRTLAVALSRD-GNSQIYTVNADGSG---------LRRLTQSSGIDTEPFFSP 293 (427)
T ss_pred CCCE--EEeecCC---CCccceEECCCCCEEEEEEccC-CCceEEEEECCCCC---------cEECCCCCCCCcCeEEcC
Confidence 6532 2333222 2335789999999999876542 34799999997742 223333221112 35999
Q ss_pred eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeee
Q psy2521 380 NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 380 dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
||++|+|.+++.+ ..+||.++++++. .+.+..+. .......++++|+.|++....++..+|+++|+.+|+. +.+
T Consensus 294 DG~~l~f~s~~~g-~~~Iy~~~~~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~-~~l 367 (427)
T PRK02889 294 DGRSIYFTSDRGG-APQIYRMPASGGA---AQRVTFTG-SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV-TAL 367 (427)
T ss_pred CCCEEEEEecCCC-CcEEEEEECCCCc---eEEEecCC-CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe-EEc
Confidence 9999999888654 4579999987654 34454333 2233445667778888888777778999999976764 556
Q ss_pred cCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 460 PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 460 ~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.. +....++++|++..++|....-.. ..+|.+++
T Consensus 368 t~~-~~~~~p~~spdg~~l~~~~~~~g~-~~l~~~~~ 402 (427)
T PRK02889 368 TDT-TRDESPSFAPNGRYILYATQQGGR-SVLAAVSS 402 (427)
T ss_pred cCC-CCccCceECCCCCEEEEEEecCCC-EEEEEEEC
Confidence 543 223467789999999887764433 56888887
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.6e-14 Score=156.46 Aligned_cols=241 Identities=16% Similarity=0.149 Sum_probs=163.4
Q ss_pred CcEEEEEEecCC--CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEE
Q psy2521 220 GKHFAYCLSKSG--SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 297 (783)
Q Consensus 220 G~~la~~~~~~G--~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~ 297 (783)
+++|||+....+ ...++|+++|.+++.....+..+.....+.|||||+.|+|++... ...+||++
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~-------------~~~~l~~~ 233 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER-------------GRSAIYVQ 233 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC-------------CCcEEEEE
Confidence 567889876432 346789999998776665554444446899999999999998431 24579999
Q ss_pred EcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EE
Q psy2521 298 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EI 376 (783)
Q Consensus 298 ~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~ 376 (783)
++.++.. ..+...+ .....+.|||||++|++..... ...+||++|+.++. ...+........ ..
T Consensus 234 dl~~g~~--~~l~~~~---g~~~~~~~SpDG~~l~~~~s~~-g~~~Iy~~d~~~g~---------~~~lt~~~~~~~~~~ 298 (433)
T PRK04922 234 DLATGQR--ELVASFR---GINGAPSFSPDGRRLALTLSRD-GNPEIYVMDLGSRQ---------LTRLTNHFGIDTEPT 298 (433)
T ss_pred ECCCCCE--EEeccCC---CCccCceECCCCCEEEEEEeCC-CCceEEEEECCCCC---------eEECccCCCCccceE
Confidence 9976532 2333222 1234689999999999876543 34799999998852 222332221122 36
Q ss_pred EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCcee
Q psy2521 377 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 456 (783)
Q Consensus 377 ~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~ 456 (783)
|+|||++|+|.+++.+ ..+||.++++++. .+.+...+ .......++++|+.|++....++..+|+++|+.+|+.
T Consensus 299 ~spDG~~l~f~sd~~g-~~~iy~~dl~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~- 372 (433)
T PRK04922 299 WAPDGKSIYFTSDRGG-RPQIYRVAASGGS---AERLTFQG-NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV- 372 (433)
T ss_pred ECCCCCEEEEEECCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-
Confidence 9999999999988754 3579999987765 45554433 2222345667778888877766677899999976664
Q ss_pred eeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 457 HSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 457 ~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.++... ....+++++++..++|.... ..-..+|.+++
T Consensus 373 ~~Lt~~~-~~~~p~~spdG~~i~~~s~~-~g~~~L~~~~~ 410 (433)
T PRK04922 373 RTLTPGS-LDESPSFAPNGSMVLYATRE-GGRGVLAAVST 410 (433)
T ss_pred EECCCCC-CCCCceECCCCCEEEEEEec-CCceEEEEEEC
Confidence 5665432 23456788999988876654 22357999988
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-13 Score=155.61 Aligned_cols=249 Identities=16% Similarity=0.138 Sum_probs=165.9
Q ss_pred EeeEEECCCCcEEEEEEecC--CCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~--G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+.+.... -.++|||..... +.+.++|+++|.+++.....+........+.|||||+.|+|++...
T Consensus 154 ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~------------ 220 (430)
T PRK00178 154 LTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ------------ 220 (430)
T ss_pred HhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC------------
Confidence 4454443 566799987543 3456899999999887655444333346889999999999998431
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+||++++.++..+ .+...+ .....+.|||||++|++..... +..+||++|++++. ...+..
T Consensus 221 -~~~~l~~~~l~~g~~~--~l~~~~---g~~~~~~~SpDG~~la~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~ 284 (430)
T PRK00178 221 -KRPRIFVQNLDTGRRE--QITNFE---GLNGAPAWSPDGSKLAFVLSKD-GNPEIYVMDLASRQ---------LSRVTN 284 (430)
T ss_pred -CCCEEEEEECCCCCEE--EccCCC---CCcCCeEECCCCCEEEEEEccC-CCceEEEEECCCCC---------eEEccc
Confidence 2347999999776432 333222 1234689999999999887553 34799999998842 223333
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
...... ..|+|||++|+|.+++++ ..+||.+++.++. ++.+.... .......+.++++.|++....++..+|++
T Consensus 285 ~~~~~~~~~~spDg~~i~f~s~~~g-~~~iy~~d~~~g~---~~~lt~~~-~~~~~~~~Spdg~~i~~~~~~~~~~~l~~ 359 (430)
T PRK00178 285 HPAIDTEPFWGKDGRTLYFTSDRGG-KPQIYKVNVNGGR---AERVTFVG-NYNARPRLSADGKTLVMVHRQDGNFHVAA 359 (430)
T ss_pred CCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECCCCC---EEEeecCC-CCccceEECCCCCEEEEEEccCCceEEEE
Confidence 222222 369999999999987754 4579999998765 45554433 22223445667788988887777778999
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|+.+|+. +.++... ....+++++++..++|+...-. -..+|.+++
T Consensus 360 ~dl~tg~~-~~lt~~~-~~~~p~~spdg~~i~~~~~~~g-~~~l~~~~~ 405 (430)
T PRK00178 360 QDLQRGSV-RILTDTS-LDESPSVAPNGTMLIYATRQQG-RGVLMLVSI 405 (430)
T ss_pred EECCCCCE-EEccCCC-CCCCceECCCCCEEEEEEecCC-ceEEEEEEC
Confidence 99976664 6666432 2225677899988887654322 245888887
|
|
| >PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.4e-15 Score=151.77 Aligned_cols=186 Identities=20% Similarity=0.187 Sum_probs=124.4
Q ss_pred EEEecCCCCCccCCcCcHHHHHHHH-cCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc---CCCC
Q psy2521 558 IIYGYGGYGVSVLPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTK 633 (783)
Q Consensus 558 ll~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d 633 (783)
|||+|||................++ +.|++|+++|||-..+. .-...++|+.++++|++++ -..|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 7999999766555444444444444 47999999999975442 2234588999999999987 2478
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhhhcccccccccch--hhhC-CCC-CHHHH----HHH-
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFNKFTIAYYSE--SEFG-SPN-NKTHF----HNL- 700 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~~~~~~~~~~~~~--~~~g-~p~-~~~~~----~~~- 700 (783)
++||+|+|.|+||.|++.++.+..+ ..+++++.+|+.|+.... ...+. .++. .+- ..... +.+
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFD----GPSYDDSNENKDDPFLPAPKIDWFWKLYL 145 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSS----CHHHHHHHHHSTTSSSBHHHHHHHHHHHH
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcc----ccccccccccccccccccccccccccccc
Confidence 9999999999999999998864332 479999999998882110 00110 0110 010 11111 111
Q ss_pred -------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 701 -------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 701 -------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
...||+.. ... ..+||++|++|+.|..+ .++.+|+++|++. |.+++++++++.+|+|.
T Consensus 146 ~~~~~~~~~~sp~~~-~~~---~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~-------gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 146 PGSDRDDPLASPLNA-SDL---KGLPPTLIIHGEDDVLV--DDSLRFAEKLKKA-------GVDVELHVYPGMPHGFF 210 (211)
T ss_dssp STGGTTSTTTSGGGS-SCC---TTCHEEEEEEETTSTTH--HHHHHHHHHHHHT-------T-EEEEEEETTEETTGG
T ss_pred ccccccccccccccc-ccc---ccCCCeeeeccccccch--HHHHHHHHHHHHC-------CCCEEEEEECCCeEEee
Confidence 13456544 221 46889999999999754 6889999999998 99999999999999873
|
; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A .... |
| >PHA02857 monoglyceride lipase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=151.99 Aligned_cols=214 Identities=13% Similarity=0.104 Sum_probs=135.4
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+.+.||.++++.++.|.+ .+.|+|+++||....+. .|.. ....|++.||.|+++|+||.|..... .....
T Consensus 5 ~~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~~--~~~~-~~~~l~~~g~~via~D~~G~G~S~~~---~~~~~ 74 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT----YPKALVFISHGAGEHSG--RYEE-LAENISSLGILVFSHDHIGHGRSNGE---KMMID 74 (276)
T ss_pred eecCCCCEEEEEeccCCC----CCCEEEEEeCCCccccc--hHHH-HHHHHHhCCCEEEEccCCCCCCCCCc---cCCcC
Confidence 445699999999987742 45689999999755443 3443 34556667999999999996543211 01011
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc--------------c
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--------------N 676 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~--------------~ 676 (783)
.-...++|+...++++.+. ....++.++|+|+||.++..++.++|++++++|+.+|..+.... .
T Consensus 75 ~~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred CHHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhC
Confidence 1122367777888777654 22457999999999999999999999999999999997653110 0
Q ss_pred cccccccchhhhCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 677 KFTIAYYSESEFGSPNNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 677 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~----------------------~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
.......+...+-.....+... ..++|+ ..+.. +.+| +|+++|++|..||+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vliv~G~~D~i~~~ 225 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDEVYK--YQYDPLVNHEKIKAGFASQVLKATNKVRKIIPK----IKTP-ILILQGTNNEISDV 225 (276)
T ss_pred CCCccCCCCHhhccCCHHHHHH--HhcCCCccCCCccHHHHHHHHHHHHHHHHhccc----CCCC-EEEEecCCCCcCCh
Confidence 0000000000000000000000 011111 12222 5677 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
.++.++.+.+.. ...+.+++++||.....
T Consensus 226 ~~~~~l~~~~~~----------~~~~~~~~~~gH~~~~e 254 (276)
T PHA02857 226 SGAYYFMQHANC----------NREIKIYEGAKHHLHKE 254 (276)
T ss_pred HHHHHHHHHccC----------CceEEEeCCCcccccCC
Confidence 999888776532 35789999999987643
|
|
| >PRK11460 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.7e-14 Score=147.27 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=124.5
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCC----CCChhHHhhccccCCcCh-------HHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG----ELGEDWHNAGRLLKKQNC-------FDDFQ 620 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g----~~G~~~~~~g~~~~~~~~-------~~D~~ 620 (783)
..+.|+||++||..+.... |.. ....|.+.++.+.++.+||-. ..|..|.... .....+. ...+.
T Consensus 13 ~~~~~~vIlLHG~G~~~~~--~~~-l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVA--MGE-IGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCCcEEEEEeCCCCChHH--HHH-HHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHH
Confidence 3467999999997665433 332 344555456555666677632 2356776421 1111121 23344
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHH
Q psy2521 621 AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNL 700 (783)
Q Consensus 621 a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 700 (783)
+.++++.++..++++||+++|+|+||.+++.++.++|++++++++..|.+.. .|..
T Consensus 89 ~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-----------------~~~~------- 144 (232)
T PRK11460 89 ETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-----------------LPET------- 144 (232)
T ss_pred HHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-----------------cccc-------
Confidence 5666776676688899999999999999999998899998888776653210 0000
Q ss_pred HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 701 LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 701 ~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
+ . ...| +|++||.+|++||++.+.++++.|++. |.++++++|+++||++..+.-..+.+
T Consensus 145 ----~--~-------~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~-------g~~~~~~~~~~~gH~i~~~~~~~~~~ 203 (232)
T PRK11460 145 ----A--P-------TATT-IHLIHGGEDPVIDVAHAVAAQEALISL-------GGDVTLDIVEDLGHAIDPRLMQFALD 203 (232)
T ss_pred ----c--c-------CCCc-EEEEecCCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCCCCHHHHHHHHH
Confidence 0 1 1233 999999999999999999999999988 88899999999999998655554443
|
|
| >PRK10749 lysophospholipase L2; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.7e-14 Score=151.78 Aligned_cols=228 Identities=14% Similarity=0.105 Sum_probs=135.3
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.++..+...||.++.+....|. .+.|+||++||..+... .|.. ....+.++||.|+++|+||.|..+.....
T Consensus 30 ~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~--~y~~-~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 101 (330)
T PRK10749 30 REEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYV--KYAE-LAYDLFHLGYDVLIIDHRGQGRSGRLLDD 101 (330)
T ss_pred ccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHH--HHHH-HHHHHHHCCCeEEEEcCCCCCCCCCCCCC
Confidence 4556677789998888776543 24578999999744322 1222 33334457999999999997655422111
Q ss_pred --hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc------
Q psy2521 606 --AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK------ 677 (783)
Q Consensus 606 --~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~------ 677 (783)
.+....-....+|+.+.++.++.. .+..++.++|||+||.++..++.++|+.++++|+.+|.........
T Consensus 102 ~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~ 179 (330)
T PRK10749 102 PHRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARR 179 (330)
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHH
Confidence 000011112234555555554433 2456899999999999999999999999999999998653210000
Q ss_pred ---c----c--------ccccchhhh-CC---CCCHHHHH---HHHhcCcc----------------------cCCCCCC
Q psy2521 678 ---F----T--------IAYYSESEF-GS---PNNKTHFH---NLLSYSPL----------------------HNIKVPP 713 (783)
Q Consensus 678 ---~----~--------~~~~~~~~~-g~---p~~~~~~~---~~~~~sp~----------------------~~v~~~~ 713 (783)
. . ....|.... -. ....+.++ ......|. .++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 257 (330)
T PRK10749 180 ILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGD-- 257 (330)
T ss_pred HHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccC--
Confidence 0 0 000010000 00 00111110 00011121 22222
Q ss_pred CCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 714 NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 714 ~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+..| +||+||+.|..|++..+.++++.++.+ .......++.+++++||....
T Consensus 258 --i~~P-~Lii~G~~D~vv~~~~~~~~~~~l~~~----~~~~~~~~l~~~~gagH~~~~ 309 (330)
T PRK10749 258 --ITTP-LLLLQAEEERVVDNRMHDRFCEARTAA----GHPCEGGKPLVIKGAYHEILF 309 (330)
T ss_pred --CCCC-EEEEEeCCCeeeCHHHHHHHHHHHhhc----CCCCCCceEEEeCCCcchhhh
Confidence 6677 999999999999999999999988776 111134579999999998653
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.3e-13 Score=143.83 Aligned_cols=302 Identities=12% Similarity=0.110 Sum_probs=179.7
Q ss_pred EeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 165 RQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 165 ~~G~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
++|.++++..+...+ -...+|+.+..++..+.|.++.. .+..+.|||||++|||..+ ..||++
T Consensus 2 ~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~-------~~~~~~~sP~g~~~~~v~~------~nly~~ 68 (353)
T PF00930_consen 2 PDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPP-------KLQDAKWSPDGKYIAFVRD------NNLYLR 68 (353)
T ss_dssp TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EET-------TBSEEEE-SSSTEEEEEET------TEEEEE
T ss_pred CCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCcc-------ccccceeecCCCeeEEEec------CceEEE
Confidence 467776665543211 23456666665555555544311 1567999999999999975 469999
Q ss_pred ECCCCccccccccc------------------cccCeeEEeeCCCEEEEEEeecCCCCC--------CCC---cc-----
Q psy2521 241 DVDTGKDYPEVLKN------------------VKFPSISWTHDHKGFFYNQYCDINGTA--------DGT---ET----- 286 (783)
Q Consensus 241 Dl~tg~~~~~~~~~------------------~~~~~~~WspDg~~l~y~~~~~~~~~~--------~g~---~~----- 286 (783)
++.+++.+++|..+ .....+.|||||+.|+|.+.++..... .+. ..
T Consensus 69 ~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~Y 148 (353)
T PF00930_consen 69 DLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRY 148 (353)
T ss_dssp SSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE-
T ss_pred ECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCccccccc
Confidence 99888766555433 123578899999999999998764311 100 00
Q ss_pred ----cccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCCcEE-EEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 287 ----TAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYL-LVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 287 ----~~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l-~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
+.+-.-+|+++++.++....+.+-. ......+...+.|++|++.+ +...++......+.++|+.+|....+.
T Consensus 149 Pk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~-- 226 (353)
T PF00930_consen 149 PKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVL-- 226 (353)
T ss_dssp -BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEE--
T ss_pred CCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEE--
Confidence 0111235666777655432211110 01223466789999999955 445555544588889999775321110
Q ss_pred CCceeeecCcc--ceeEEEE-eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEE
Q psy2521 361 FPLKTVIPGMD--HHHEIIA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVH 436 (783)
Q Consensus 361 ~~~~~l~~~~~--~~~~~~s-~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~ 436 (783)
.....+.- .....+. +++..+++.+.+++ ..+|+.++.+++. . ..++.++..+.....+. +++.|+|.
T Consensus 227 ---~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~~---~-~~lT~G~~~V~~i~~~d~~~~~iyf~ 298 (353)
T PF00930_consen 227 ---EETSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGGK---P-RQLTSGDWEVTSILGWDEDNNRIYFT 298 (353)
T ss_dssp ---EEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSSE---E-EESS-SSS-EEEEEEEECTSSEEEEE
T ss_pred ---EecCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEcccccc---e-eccccCceeecccceEcCCCCEEEEE
Confidence 00011110 0111343 78889998888665 5579999998765 3 35555656664434333 34688888
Q ss_pred EecC--CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCc
Q psy2521 437 YIQN--VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPG 489 (783)
Q Consensus 437 ~~~~--g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~ 489 (783)
...+ ...+||+.++++|..+..|+...+....++.+++++.+...++++.+|+
T Consensus 299 a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 299 ANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp ESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred ecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 8764 3679999999525555788866332235667899999999999999985
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >PF10503 Esterase_phd: Esterase PHB depolymerase | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.4e-14 Score=138.00 Aligned_cols=195 Identities=16% Similarity=0.172 Sum_probs=125.8
Q ss_pred EEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh--hHHhhccccCCcChHH
Q psy2521 540 PMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE--DWHNAGRLLKKQNCFD 617 (783)
Q Consensus 540 ~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~--~~~~~g~~~~~~~~~~ 617 (783)
.+.++.|++.+ .++.|+||.+||+.+......-...+..+-++.||+|+.|+-......+. .|.. .....+..+..
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~~ 79 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDVA 79 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccchh
Confidence 45678888753 45789999999987665332112224456667899999998543222233 3333 22233344566
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHH
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHF 697 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 697 (783)
.+.+.+++++++.-+|++||.+.|.|+||.|+..++..+||+|+|+...+|+.--......+ ......-|....+...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~--a~~~m~~g~~~~p~~~ 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGAS--ALSAMRSGPRPAPAAA 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCccc--HHHHhhCCCCCChHHH
Confidence 67778999999988999999999999999999999999999999998887754221111100 0001111222222211
Q ss_pred HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhh
Q psy2521 698 HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747 (783)
Q Consensus 698 ~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~ 747 (783)
...+..++ ..| .+| ++|+||+.|..|.+....++.+++...
T Consensus 158 ~~a~~~~g----~~~----~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 158 WGARSDAG----AYP----GYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHhhhhcc----CCC----CCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 11111111 111 245 889999999999999999999988765
|
|
| >PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.7e-13 Score=158.37 Aligned_cols=237 Identities=18% Similarity=0.158 Sum_probs=157.8
Q ss_pred CCCCCCCCeEEEEEEECC-----CC--cEEEEEEEEecCcCCCCCccEEEE----ecCCCCCc-----------c---CC
Q psy2521 517 PEFEPTLFQTKQVYFRSK-----DG--TRVPMYIIHRVGALRNRRNPVIIY----GYGGYGVS-----------V---LP 571 (783)
Q Consensus 517 ~~~~~~~~~~~~~~~~s~-----dg--~~v~~~~~~p~~~~~~~~~P~ll~----~hGg~~~~-----------~---~~ 571 (783)
+.|+..+...|.|++.+. || ..|.+.|++|+.....-+.|+|+- ..|.-... . .+
T Consensus 161 ~~~~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~ 240 (767)
T PRK05371 161 PVFDTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKETASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPP 240 (767)
T ss_pred cccCcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCccCCCCccceEEecCccccCCCCcccccccccCCccccccCC
Confidence 457778888888888874 55 368889999987543347788774 22320000 0 00
Q ss_pred -------------------------cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHH
Q psy2521 572 -------------------------TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYM 626 (783)
Q Consensus 572 -------------------------~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l 626 (783)
........++.++||+|++.|.||.++.+..|.. ......+|..++++||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl 315 (767)
T PRK05371 241 RAQFTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWL 315 (767)
T ss_pred ccccccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHH
Confidence 0011234566668999999999997665544322 2345788999999999
Q ss_pred HHc--CCCC------------CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc----ccccc----
Q psy2521 627 INK--KYTK------------PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IAYYS---- 684 (783)
Q Consensus 627 ~~~--~~~d------------~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~----~~~~~---- 684 (783)
..+ .++| ..||+++|.||||+++.++|++.|..++|+|+.+++.|+..+.... ....|
T Consensus 316 ~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged 395 (767)
T PRK05371 316 NGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGED 395 (767)
T ss_pred hhCCccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcc
Confidence 853 2334 4799999999999999999998888899999999998875442110 00001
Q ss_pred ---hhhh--------CCC-CCHHHH-------------------HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCC
Q psy2521 685 ---ESEF--------GSP-NNKTHF-------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 733 (783)
Q Consensus 685 ---~~~~--------g~p-~~~~~~-------------------~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~ 733 (783)
..++ |.- ...+.+ +++...++..++++ ++.| +|++||.+|.+|+
T Consensus 396 ~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~k----IkvP-vLlIhGw~D~~V~ 470 (767)
T PRK05371 396 LDVLAELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADK----IKAS-VLVVHGLNDWNVK 470 (767)
T ss_pred hhhHHHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhC----CCCC-EEEEeeCCCCCCC
Confidence 0000 000 000001 12233455555555 7787 9999999999999
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+.++.+++++|++. +.+..+.+. ..+|+..
T Consensus 471 ~~~s~~ly~aL~~~-------g~pkkL~l~-~g~H~~~ 500 (767)
T PRK05371 471 PKQVYQWWDALPEN-------GVPKKLFLH-QGGHVYP 500 (767)
T ss_pred hHHHHHHHHHHHhc-------CCCeEEEEe-CCCccCC
Confidence 99999999999987 778887665 4579754
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.55 E-value=9.3e-13 Score=144.42 Aligned_cols=260 Identities=13% Similarity=0.118 Sum_probs=167.8
Q ss_pred EEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc
Q psy2521 170 YFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP 249 (783)
Q Consensus 170 ~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~ 249 (783)
.|....+.+.....|+..+..+.....+.+... -+..+.|||||+.++|..-..+.- ..++++|+++|+...
T Consensus 161 ~~v~~~~~~~~~~~l~~~D~dg~~~~~l~~~~~-------~~~~p~ws~~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~ 232 (425)
T COG0823 161 AYVAESDGGPLPYELALGDYDGYNQQKLTDSGS-------LILTPAWSPDGKKLAYVSFELGGC-PRIYYLDLNTGKRPV 232 (425)
T ss_pred EEEeecccCCCCceEEEEccCCcceeEecccCc-------ceeccccCcCCCceEEEEEecCCC-ceEEEEeccCCccce
Confidence 333333445556777776653333344444332 256689999999999997654432 689999999987544
Q ss_pred ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCc
Q psy2521 250 EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGR 329 (783)
Q Consensus 250 ~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk 329 (783)
..........+.|||||++|+|+... .....||..++.+.+... +... ......+.|||||+
T Consensus 233 i~~~~g~~~~P~fspDG~~l~f~~~r-------------dg~~~iy~~dl~~~~~~~--Lt~~---~gi~~~Ps~spdG~ 294 (425)
T COG0823 233 ILNFNGNNGAPAFSPDGSKLAFSSSR-------------DGSPDIYLMDLDGKNLPR--LTNG---FGINTSPSWSPDGS 294 (425)
T ss_pred eeccCCccCCccCCCCCCEEEEEECC-------------CCCccEEEEcCCCCccee--cccC---CccccCccCCCCCC
Confidence 33222233689999999999999943 245689999998876322 2222 22345789999999
Q ss_pred EEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC
Q psy2521 330 YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK 408 (783)
Q Consensus 330 ~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~ 408 (783)
+|+|.+.++ ...+||+++++++. ...++.... ...+.|+|||++|.|.+.. .....+...++.++..
T Consensus 295 ~ivf~Sdr~-G~p~I~~~~~~g~~---------~~riT~~~~~~~~p~~SpdG~~i~~~~~~-~g~~~i~~~~~~~~~~- 362 (425)
T COG0823 295 KIVFTSDRG-GRPQIYLYDLEGSQ---------VTRLTFSGGGNSNPVWSPDGDKIVFESSS-GGQWDIDKNDLASGGK- 362 (425)
T ss_pred EEEEEeCCC-CCcceEEECCCCCc---------eeEeeccCCCCcCccCCCCCCEEEEEecc-CCceeeEEeccCCCCc-
Confidence 999998764 45799999998841 233333222 2245799999999998843 2336788888766441
Q ss_pred CcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeec
Q psy2521 409 NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471 (783)
Q Consensus 409 ~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~ 471 (783)
|+.+ ...... -..-+..++..+++.....+.+.+...+. +|+..+.+....+.+..+.+
T Consensus 363 -~~~l-t~~~~~-e~ps~~~ng~~i~~~s~~~~~~~l~~~s~-~g~~~~~~~~~~~~~~~p~w 421 (425)
T COG0823 363 -IRIL-TSTYLN-ESPSWAPNGRMIMFSSGQGGGSVLSLVSL-DGRVSRPLPLADGDVRVPAW 421 (425)
T ss_pred -EEEc-cccccC-CCCCcCCCCceEEEeccCCCCceEEEeec-cceeEEEEeccCcceecccc
Confidence 4433 332111 12224445577777777777788888888 78776655554455544433
|
|
| >KOG4391|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.7e-14 Score=130.73 Aligned_cols=216 Identities=15% Similarity=0.188 Sum_probs=155.5
Q ss_pred CCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 520 ~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
+..++.-+++...++|..++.++.+.- ..+.|+++|+|+..|.... +.+-..-++.+.+..|++++||| |
T Consensus 48 ~~~n~pye~i~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmGh--r~~i~~~fy~~l~mnv~ivsYRG---Y 117 (300)
T KOG4391|consen 48 KEFNMPYERIELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMGH--RLPIARVFYVNLKMNVLIVSYRG---Y 117 (300)
T ss_pred cccCCCceEEEEEcCcceeEeeeeecc-----cCCCceEEEEccCCCcccc--hhhHHHHHHHHcCceEEEEEeec---c
Confidence 345677899999999999999999873 2478999999997665432 33333345556799999999999 7
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
|.+-..+ ....-..|-.++++||..+...|..||.++|.|.||..+..++...-++..|+|...-++.+.+..-..
T Consensus 118 G~S~Gsp----sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~ 193 (300)
T KOG4391|consen 118 GKSEGSP----SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPL 193 (300)
T ss_pred ccCCCCc----cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhe
Confidence 7443222 112224689999999999999999999999999999999999998889999999999888774432100
Q ss_pred ccccchhhhCCCCCHHHHHHHH-hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLL-SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~-~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
. .-|+...-+ .+ ..+ .++.+..+.. .+.| .|++.|..|..|||-+-+++++..-.. ..
T Consensus 194 v-----~p~~~k~i~-~l-c~kn~~~S~~ki~~----~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~---------~K 252 (300)
T KOG4391|consen 194 V-----FPFPMKYIP-LL-CYKNKWLSYRKIGQ----CRMP-FLFISGLKDELVPPVMMRQLYELCPSR---------TK 252 (300)
T ss_pred e-----ccchhhHHH-HH-HHHhhhcchhhhcc----ccCc-eEEeecCccccCCcHHHHHHHHhCchh---------hh
Confidence 0 001000000 00 011 3344444544 4667 999999999999999998888875444 34
Q ss_pred EEEEeCCCCccC
Q psy2521 759 LLRVEQDAGHGQ 770 (783)
Q Consensus 759 ~l~~~~~~gHg~ 770 (783)
.+..||++.|.-
T Consensus 253 rl~eFP~gtHND 264 (300)
T KOG4391|consen 253 RLAEFPDGTHND 264 (300)
T ss_pred hheeCCCCccCc
Confidence 688999999963
|
|
| >PLN02652 hydrolase; alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.7e-13 Score=146.73 Aligned_cols=223 Identities=16% Similarity=0.064 Sum_probs=138.4
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
.-......+...+|..+++..+.|.. ..+.|+||++||..+.... |. .+...|+++||.|+++|+||.|.....
T Consensus 107 g~~~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~~--~~-~~a~~L~~~Gy~V~~~D~rGhG~S~~~ 180 (395)
T PLN02652 107 GTRWATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHSGR--YL-HFAKQLTSCGFGVYAMDWIGHGGSDGL 180 (395)
T ss_pred CceEEEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHHHH--HH-HHHHHHHHCCCEEEEeCCCCCCCCCCC
Confidence 33456666777889999999888853 2456899999997654322 33 344556667999999999996543321
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCcchhhhccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~~d~~~~~~~~ 679 (783)
+ +.........+|+.++++++..+. ...++.++|||+||++++.++. +|+ .++++|+.+|.+++.......
T Consensus 181 ~---~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~ 254 (395)
T PLN02652 181 H---GYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV 254 (395)
T ss_pred C---CCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH
Confidence 1 111111223567888888886541 2247999999999999987764 564 789999999987553211000
Q ss_pred ---------ccccch----hhhCCC--CCHHHH-H-------------------HHHhcC-cccCCCCCCCCCcCCcEEE
Q psy2521 680 ---------IAYYSE----SEFGSP--NNKTHF-H-------------------NLLSYS-PLHNIKVPPNNTQYPATLV 723 (783)
Q Consensus 680 ---------~~~~~~----~~~g~p--~~~~~~-~-------------------~~~~~s-p~~~v~~~~~~~~~P~~Li 723 (783)
..+.+. ..++.+ .+++.. . .++... ...+++. +.+| +||
T Consensus 255 ~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~----I~vP-vLI 329 (395)
T PLN02652 255 GAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS----VTVP-FMV 329 (395)
T ss_pred HHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc----CCCC-EEE
Confidence 000000 000101 011110 0 000000 0122233 6777 999
Q ss_pred EecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 724 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 724 ~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+||++|..||+.++.++++++... ...++++++++|...
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~~---------~k~l~~~~ga~H~l~ 368 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAASR---------HKDIKLYDGFLHDLL 368 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCCC---------CceEEEECCCeEEec
Confidence 999999999999999998886533 346788999999864
|
|
| >KOG1455|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.4e-13 Score=134.47 Aligned_cols=226 Identities=13% Similarity=0.107 Sum_probs=149.0
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
.....-++++.+|.++..-...|.+- .++.-+|+++||..+.+ ...|+... ..|+..||.|...|++|+|...
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~-s~~~~~~a-~~l~~~g~~v~a~D~~GhG~Sd--- 97 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHS-SWRYQSTA-KRLAKSGFAVYAIDYEGHGRSD--- 97 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccc-hhhHHHHH-HHHHhCCCeEEEeeccCCCcCC---
Confidence 34556677888999998887777542 25677888999864443 34455433 4455679999999999965322
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc------
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK------ 677 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~------ 677 (783)
-..+.-..-...++|+++-.+..+.+.--.--..+++|+||||.+++.++.++|+.+.++|..+|+.-+..-.+
T Consensus 98 Gl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~ 177 (313)
T KOG1455|consen 98 GLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVI 177 (313)
T ss_pred CCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHH
Confidence 11122223344567777777776655333335789999999999999999999999999999999764432210
Q ss_pred ------ccccccchh----hhCCC--CCHHHHHHHHhcCcc----------------------cCCCCCCCCCcCCcEEE
Q psy2521 678 ------FTIAYYSES----EFGSP--NNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATLV 723 (783)
Q Consensus 678 ------~~~~~~~~~----~~g~p--~~~~~~~~~~~~sp~----------------------~~v~~~~~~~~~P~~Li 723 (783)
....+.|.. .-..+ .+++. ......+|+ .|+.. +..| +||
T Consensus 178 ~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~-r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~----vtvP-fli 251 (313)
T KOG1455|consen 178 SILTLLSKLIPTWKIVPTKDIIDVAFKDPEK-RKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE----VTVP-FLI 251 (313)
T ss_pred HHHHHHHHhCCceeecCCccccccccCCHHH-HHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc----cccc-EEE
Confidence 011223320 00011 12221 122233333 23333 6777 999
Q ss_pred EecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 724 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 724 ~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+||+.|.+..|.-+.++++..... +..+.+|||.-|+..
T Consensus 252 lHG~dD~VTDp~~Sk~Lye~A~S~---------DKTlKlYpGm~H~Ll 290 (313)
T KOG1455|consen 252 LHGTDDKVTDPKVSKELYEKASSS---------DKTLKLYPGMWHSLL 290 (313)
T ss_pred EecCCCcccCcHHHHHHHHhccCC---------CCceeccccHHHHhh
Confidence 999999999999999999876544 557999999999975
|
|
| >KOG1515|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.2e-13 Score=138.74 Aligned_cols=222 Identities=17% Similarity=0.172 Sum_probs=150.4
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
....+.+. ..+.++..++.|.......+.|+|||+|||...- ..+.|......+..+.+-+|+.+|||-.-|.
T Consensus 62 ~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-- 137 (336)
T KOG1515|consen 62 TSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-- 137 (336)
T ss_pred eeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC--
Confidence 44555544 4456899999998865447899999999984332 2344444444444677999999999986553
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHc----CCCCCCcEEEEEeChhHHHHHHHHhcCC------CceeEEEEcCCcch
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINK----KYTKPKYITIMGGSNGGLLVGACLNQRP------ELYGAALILVGALD 671 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~----~~~d~~ri~i~G~S~GG~l~~~~~~~~p------~lf~a~i~~~~~~d 671 (783)
.-...++|..+|+.|+.++ ..+|++||+|+|-|+||.+|..++.+.- -..++.|+..|++.
T Consensus 138 ---------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 138 ---------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred ---------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 2234589999999999885 4589999999999999999988875532 35689999999987
Q ss_pred hhhcccccccccchhhhCCCC-CHHHHHH-HHh-------------cCcccCCC-CCCCCCcCCcEEEEecCCCCCCCcH
Q psy2521 672 MLRFNKFTIAYYSESEFGSPN-NKTHFHN-LLS-------------YSPLHNIK-VPPNNTQYPATLVLTGDHDDRVPPL 735 (783)
Q Consensus 672 ~~~~~~~~~~~~~~~~~g~p~-~~~~~~~-~~~-------------~sp~~~v~-~~~~~~~~P~~Li~~g~~D~~V~~~ 735 (783)
......... .+. .-+.+. ....++. ++. .+|..+.. ....+..+|++||+++..|... .
T Consensus 209 ~~~~~~~e~--~~~-~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D 283 (336)
T KOG1515|consen 209 GTDRTESEK--QQN-LNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--D 283 (336)
T ss_pred CCCCCCHHH--HHh-hcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--h
Confidence 665432100 000 001111 1111111 111 12222110 0111468889999999999665 7
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 736 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 736 ~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+...++++|++. |.++++..+++++|+|.
T Consensus 284 ~~~~Y~~~Lkk~-------Gv~v~~~~~e~~~H~~~ 312 (336)
T KOG1515|consen 284 EGLAYAEKLKKA-------GVEVTLIHYEDGFHGFH 312 (336)
T ss_pred hhHHHHHHHHHc-------CCeEEEEEECCCeeEEE
Confidence 889999999998 99999999999999974
|
|
| >PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively [] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-13 Score=141.89 Aligned_cols=213 Identities=19% Similarity=0.179 Sum_probs=134.3
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCc-CcHH----HHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPT-FSIS----RCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~-~~~~----~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
||++|.+.+++| +....++.|+||..++-.... .... ..+. ...|. ++||+|++.|.||.|+.+..|...
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~-~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFA-ERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHH-HTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHH-hCCCEEEEECCcccccCCCccccC
Confidence 899999999999 445578999999988743211 0000 1110 01144 579999999999977666554332
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh-cc------ccc
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR-FN------KFT 679 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~-~~------~~~ 679 (783)
..++.+|..++++|+.++.+.+ .||+++|.|++|.....++.+.|...+|+++.++..|+.+ .. ...
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 4567899999999999997765 6999999999999999999977888899999999999877 21 111
Q ss_pred ccccch------hhhCC-C-CCHHHH----------------------------------HHHHhcCcccCCCCCCCCCc
Q psy2521 680 IAYYSE------SEFGS-P-NNKTHF----------------------------------HNLLSYSPLHNIKVPPNNTQ 717 (783)
Q Consensus 680 ~~~~~~------~~~g~-p-~~~~~~----------------------------------~~~~~~sp~~~v~~~~~~~~ 717 (783)
....|. ..... + ...+.+ +++.+.++..++.+ +.
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~----i~ 228 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDK----ID 228 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG------
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhh----CC
Confidence 112331 00011 0 000000 01112222222333 67
Q ss_pred CCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCcc
Q psy2521 718 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHG 769 (783)
Q Consensus 718 ~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~-~~~~l~~~~~~gHg 769 (783)
.| +|+++|..|.... ..+.+.+++|+.. + ++..|++-| .+|+
T Consensus 229 vP-~l~v~Gw~D~~~~-~~~~~~~~~l~~~-------~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 229 VP-VLIVGGWYDTLFL-RGALRAYEALRAP-------GSKPQRLIIGP-WTHG 271 (272)
T ss_dssp SE-EEEEEETTCSSTS-HHHHHHHHHHCTT-------STC-EEEEEES-ESTT
T ss_pred CC-EEEecccCCcccc-hHHHHHHHHhhcC-------CCCCCEEEEeC-CCCC
Confidence 77 9999999997777 8899999999887 5 566777755 4675
|
It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A .... |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.9e-12 Score=139.99 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=161.2
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEE
Q psy2521 217 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 296 (783)
Q Consensus 217 SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~ 296 (783)
...+.+++|....++.....|+++|.+++.....+..+.....+.|||||+.|+|+.... ....|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~-------------~~~~i~v 218 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES-------------GKPEIYV 218 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC-------------CCcEEEE
Confidence 456788999877654556889999998776555443332235789999999999998432 2357999
Q ss_pred EEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce-eE
Q psy2521 297 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH-HE 375 (783)
Q Consensus 297 ~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~-~~ 375 (783)
+++.++.. ..+.... .....+.|||||+.|++.... ....+||++|+.++. ...+....... ..
T Consensus 219 ~d~~~g~~--~~~~~~~---~~~~~~~~spDg~~l~~~~~~-~~~~~i~~~d~~~~~---------~~~l~~~~~~~~~~ 283 (417)
T TIGR02800 219 QDLATGQR--EKVASFP---GMNGAPAFSPDGSKLAVSLSK-DGNPDIYVMDLDGKQ---------LTRLTNGPGIDTEP 283 (417)
T ss_pred EECCCCCE--EEeecCC---CCccceEECCCCCEEEEEECC-CCCccEEEEECCCCC---------EEECCCCCCCCCCE
Confidence 99876532 2222221 123468899999999987654 234789999998742 12222221111 23
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
.|++||++|+|.+++.+ ..+||.++++++. ++.+.... .......+..+++.|++.....+..+|+++|+.++..
T Consensus 284 ~~s~dg~~l~~~s~~~g-~~~iy~~d~~~~~---~~~l~~~~-~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 284 SWSPDGKSIAFTSDRGG-SPQIYMMDADGGE---VRRLTFRG-GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred EECCCCCEEEEEECCCC-CceEEEEECCCCC---EEEeecCC-CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 58999999999888754 3479999998765 45555443 3333445566667888887777778999999966543
Q ss_pred eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 456 LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 456 ~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.++.. +....+.+++++..+++....-.. ..++..+.
T Consensus 359 -~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~ 396 (417)
T TIGR02800 359 -RVLTDT-GLDESPSFAPNGRMILYATTRGGR-GVLGLVST 396 (417)
T ss_pred -EEccCC-CCCCCceECCCCCEEEEEEeCCCc-EEEEEEEC
Confidence 555443 223345678888888877765433 46777666
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.6e-12 Score=140.05 Aligned_cols=234 Identities=13% Similarity=0.130 Sum_probs=149.5
Q ss_pred CcEEEEEEecCC-CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEE
Q psy2521 220 GKHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 298 (783)
Q Consensus 220 G~~la~~~~~~G-~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~ 298 (783)
+++|||+....+ ...++|+++|.+++.....+........+.|||||+.|+|++..+ ...+||+++
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~-------------~~~~i~i~d 234 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN-------------KKSQLVVHD 234 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC-------------CCcEEEEEe
Confidence 688999987643 445899999998876554444333346899999999999998532 234799999
Q ss_pred cCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEE
Q psy2521 299 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EII 377 (783)
Q Consensus 299 lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~ 377 (783)
+.++..+ .+...+. ....+.|||||++|++..... ...+||++|+.++. ...+........ ..|
T Consensus 235 l~tg~~~--~l~~~~g---~~~~~~wSPDG~~La~~~~~~-g~~~Iy~~d~~~~~---------~~~lt~~~~~~~~~~w 299 (429)
T PRK01742 235 LRSGARK--VVASFRG---HNGAPAFSPDGSRLAFASSKD-GVLNIYVMGANGGT---------PSQLTSGAGNNTEPSW 299 (429)
T ss_pred CCCCceE--EEecCCC---ccCceeECCCCCEEEEEEecC-CcEEEEEEECCCCC---------eEeeccCCCCcCCEEE
Confidence 8765322 3332221 224689999999999876432 33689999997742 233333222222 369
Q ss_pred EeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceee
Q psy2521 378 ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH 457 (783)
Q Consensus 378 s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~ 457 (783)
+|||++|+|.+++++ ..+||.++..+.. ..++... . ....++++|+.|++... ..++++|+.+|+. +
T Consensus 300 SpDG~~i~f~s~~~g-~~~I~~~~~~~~~----~~~l~~~-~--~~~~~SpDG~~ia~~~~----~~i~~~Dl~~g~~-~ 366 (429)
T PRK01742 300 SPDGQSILFTSDRSG-SPQVYRMSASGGG----ASLVGGR-G--YSAQISADGKTLVMING----DNVVKQDLTSGST-E 366 (429)
T ss_pred CCCCCEEEEEECCCC-CceEEEEECCCCC----eEEecCC-C--CCccCCCCCCEEEEEcC----CCEEEEECCCCCe-E
Confidence 999999999887654 3579999887654 2333322 2 22335567677777654 3578899977765 3
Q ss_pred eecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 458 SFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 458 ~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++.. .....++++|++..+++... -..-..++.++.
T Consensus 367 ~lt~~-~~~~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~ 403 (429)
T PRK01742 367 VLSST-FLDESPSISPNGIMIIYSST-QGLGKVLQLVSA 403 (429)
T ss_pred EecCC-CCCCCceECCCCCEEEEEEc-CCCceEEEEEEC
Confidence 44432 12235667888887776543 222334555555
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-12 Score=143.17 Aligned_cols=207 Identities=18% Similarity=0.122 Sum_probs=144.2
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEE
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 239 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v 239 (783)
.+.++++|..++|.....++. +.+|+.+...+..+++++.+.. -..++|||||++|||+...+|+ .+||+
T Consensus 197 ~p~ws~~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~i~~~~g~-------~~~P~fspDG~~l~f~~~rdg~--~~iy~ 266 (425)
T COG0823 197 TPAWSPDGKKLAYVSFELGGC-PRIYYLDLNTGKRPVILNFNGN-------NGAPAFSPDGSKLAFSSSRDGS--PDIYL 266 (425)
T ss_pred ccccCcCCCceEEEEEecCCC-ceEEEEeccCCccceeeccCCc-------cCCccCCCCCCEEEEEECCCCC--ccEEE
Confidence 466778888777765544332 6777777666777777774433 3468999999999999998876 89999
Q ss_pred EECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeE
Q psy2521 240 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 319 (783)
Q Consensus 240 ~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~ 319 (783)
+|+.++....++-......+++|||||+.|+|++ + .....+||+.++++.+.+ ++.+.... .
T Consensus 267 ~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~S--d-----------r~G~p~I~~~~~~g~~~~-riT~~~~~----~ 328 (425)
T COG0823 267 MDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTS--D-----------RGGRPQIYLYDLEGSQVT-RLTFSGGG----N 328 (425)
T ss_pred EcCCCCcceecccCCccccCccCCCCCCEEEEEe--C-----------CCCCcceEEECCCCCcee-EeeccCCC----C
Confidence 9999998666554444446999999999999998 2 222338999999877553 23333221 1
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 399 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~ 399 (783)
..+.|||||++|+|....+ ....|.+.|+.++. .++.+........+.|.++|+.+.|.++.. ....|+.
T Consensus 329 ~~p~~SpdG~~i~~~~~~~-g~~~i~~~~~~~~~--------~~~~lt~~~~~e~ps~~~ng~~i~~~s~~~-~~~~l~~ 398 (425)
T COG0823 329 SNPVWSPDGDKIVFESSSG-GQWDIDKNDLASGG--------KIRILTSTYLNESPSWAPNGRMIMFSSGQG-GGSVLSL 398 (425)
T ss_pred cCccCCCCCCEEEEEeccC-CceeeEEeccCCCC--------cEEEccccccCCCCCcCCCCceEEEeccCC-CCceEEE
Confidence 3689999999999987432 22567777776641 144444443333446999999999877765 4455777
Q ss_pred EcCCC
Q psy2521 400 INLNN 404 (783)
Q Consensus 400 ~d~~~ 404 (783)
++.++
T Consensus 399 ~s~~g 403 (425)
T COG0823 399 VSLDG 403 (425)
T ss_pred eeccc
Confidence 77655
|
|
| >PRK10985 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.5e-12 Score=140.21 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=89.6
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
++..++..||..+......... ...+.|+||++||..+..... |.......|.++||.|+++|+||.|+......+
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~~-~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNSP-YAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcCH-HHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 3344677899877654322111 234579999999987654332 333344556668999999999996543211111
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc--eeEEEEcCCcchh
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL--YGAALILVGALDM 672 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l--f~a~i~~~~~~d~ 672 (783)
.......+|+.++++++.++. ...++.++|+|+||.+++.++.++++. +.++|+.++..|+
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH
Confidence 111234789999999998753 235799999999999888777766542 6777776666554
|
|
| >PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.8e-13 Score=135.31 Aligned_cols=186 Identities=19% Similarity=0.161 Sum_probs=106.9
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHH-HHHcCCEEEEEecCCC------CCCCChhHHhhccccC-CcChHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCM-FLRHFNGIYAIPNIRG------GGELGEDWHNAGRLLK-KQNCFDDFQAAA 623 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~-~l~~~G~~v~~~~~RG------~g~~G~~~~~~g~~~~-~~~~~~D~~a~~ 623 (783)
+...|+||+.||- |.+. ..+. .... .+......++.++-.- +|..+.+|........ .....+++..++
T Consensus 11 ~~~~~lvi~LHG~-G~~~-~~~~-~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 11 GKAKPLVILLHGY-GDSE-DLFA-LLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp ST-SEEEEEE--T-TS-H-HHHH-HHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCceEEEEECCC-CCCc-chhH-HHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 3678999999996 3332 1111 1112 1222367777665421 1222337876432221 112333444333
Q ss_pred H-------HHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHH
Q psy2521 624 E-------YMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTH 696 (783)
Q Consensus 624 ~-------~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~ 696 (783)
+ .+++.+ ++++||.+.|+|+||.|++.++.++|+.|+++|+.+|.+-... .+ .
T Consensus 88 ~~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------~~---------~-- 147 (216)
T PF02230_consen 88 ERLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------EL---------E-- 147 (216)
T ss_dssp HHHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------CC---------H--
T ss_pred HHHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------cc---------c--
Confidence 3 223334 8999999999999999999999999999999999998663211 01 0
Q ss_pred HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchh
Q psy2521 697 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDI 776 (783)
Q Consensus 697 ~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~ 776 (783)
...+.. .+.| ++++||..|+.||...+.+.++.|++. +.+++++.|++.||.....+-+
T Consensus 148 ----------~~~~~~---~~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~-------~~~v~~~~~~g~gH~i~~~~~~ 206 (216)
T PF02230_consen 148 ----------DRPEAL---AKTP-ILIIHGDEDPVVPFEWAEKTAEFLKAA-------GANVEFHEYPGGGHEISPEELR 206 (216)
T ss_dssp ----------CCHCCC---CTS--EEEEEETT-SSSTHHHHHHHHHHHHCT-------T-GEEEEEETT-SSS--HHHHH
T ss_pred ----------cccccc---CCCc-EEEEecCCCCcccHHHHHHHHHHHHhc-------CCCEEEEEcCCCCCCCCHHHHH
Confidence 001110 1334 999999999999999999999999998 8899999999999998766555
Q ss_pred hhhcc
Q psy2521 777 ELKNP 781 (783)
Q Consensus 777 ~~~~~ 781 (783)
.+.++
T Consensus 207 ~~~~~ 211 (216)
T PF02230_consen 207 DLREF 211 (216)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
|
; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A. |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.7e-11 Score=133.52 Aligned_cols=263 Identities=16% Similarity=0.169 Sum_probs=158.1
Q ss_pred CCCCcEEEEEEecCC----CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 217 SDNGKHFAYCLSKSG----SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 217 SPDG~~la~~~~~~G----~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
||||+++++..+... +-...++|+|+++++..++.........+.|||||+.|+|++. +
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~-----------------~ 63 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRD-----------------N 63 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEET-----------------T
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEec-----------------C
Confidence 899999999765421 2236899999999987766655444578999999999999992 2
Q ss_pred eEEEEEcCCCCCCceeEE--------ecCC-----C-CeeEEEEEEecCCcEEEEEEecCCC------------------
Q psy2521 293 KIYYHVLGTEQDKDIPVV--------EFPN-----G-RSLGLHSEVTDCGRYLLVSTSNNTQ------------------ 340 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~--------~~~~-----~-~~~~~~~~~SpDGk~l~~~~~~~~~------------------ 340 (783)
.||+.++.++. ..++.. ..++ + -.....+.|||||++|++...+...
T Consensus 64 nly~~~~~~~~-~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~ 142 (353)
T PF00930_consen 64 NLYLRDLATGQ-ETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPE 142 (353)
T ss_dssp EEEEESSTTSE-EEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-E
T ss_pred ceEEEECCCCC-eEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCc
Confidence 57776654441 111111 1111 0 0012467899999999997632111
Q ss_pred --------------CcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEE-EECCCCCCceEEEEcCC
Q psy2521 341 --------------GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIV-KTTKNAPKGKVVTINLN 403 (783)
Q Consensus 341 --------------~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~-~t~~~~~~~~L~~~d~~ 403 (783)
..+|+++|++++....+ +........+.-.. .|++++++|++ ..||......|+.+|+.
T Consensus 143 ~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~----~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~ 218 (353)
T PF00930_consen 143 VESIRYPKAGDPNPRVSLFVVDLASGKTTEL----DPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDAS 218 (353)
T ss_dssp EEEEE--BTTS---EEEEEEEESSSTCCCEE-------HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEEC
T ss_pred ccccccCCCCCcCCceEEEEEECCCCcEEEe----eeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECC
Confidence 14577778876421110 00000011111111 49999885555 56888888899999997
Q ss_pred CCCCCCcEEeecCCCCceE---EEE-EE-eeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEe-eeccccccE
Q psy2521 404 NPCEKNWKTLIPEDENRTL---DVV-AA-VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITH-ISGRRKYNE 477 (783)
Q Consensus 404 ~~~~~~~~~li~~~~~~~l---~~~-~~-~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~-~s~~~d~~~ 477 (783)
++. .+.+..+.....+ ... .+ .+++.+++...++|..+|++++. +|...+.|+.....|.. +..+.+++.
T Consensus 219 tg~---~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~-~~~~~~~lT~G~~~V~~i~~~d~~~~~ 294 (353)
T PF00930_consen 219 TGE---TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDL-DGGKPRQLTSGDWEVTSILGWDEDNNR 294 (353)
T ss_dssp TTT---CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEET-TSSEEEESS-SSS-EEEEEEEECTSSE
T ss_pred CCc---eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcc-cccceeccccCceeecccceEcCCCCE
Confidence 755 3444433322222 122 33 45678888888999999999999 45556788876555633 456677888
Q ss_pred EEEEEecCCCC--ceEEEEeCCCCcCC-CCCCceEEEee
Q psy2521 478 VFYGFTSFLQP--GTIYHCNIPENITD-QDDFKPTIFRE 513 (783)
Q Consensus 478 l~~~~ss~~~P--~~vy~~d~~~~~~~-tg~~~~~~~~~ 513 (783)
++|..+. ..| ..+|++++ + .+ +.+.|+.
T Consensus 295 iyf~a~~-~~p~~r~lY~v~~-----~~~~--~~~~LT~ 325 (353)
T PF00930_consen 295 IYFTANG-DNPGERHLYRVSL-----DSGG--EPKCLTC 325 (353)
T ss_dssp EEEEESS-GGTTSBEEEEEET-----TETT--EEEESST
T ss_pred EEEEecC-CCCCceEEEEEEe-----CCCC--CeEeccC
Confidence 8887765 334 45888888 4 45 5665543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >TIGR00976 /NonD putative hydrolase, CocE/NonD family | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.1e-12 Score=148.91 Aligned_cols=135 Identities=15% Similarity=0.110 Sum_probs=104.3
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
++.||+++.+.++.|++ .++.|+||+.||...... ...+......+++++||+|+++|+||.|..+..+...
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~---- 74 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL---- 74 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec----
Confidence 57899999999999975 357899999997543221 0111111224455679999999999976655433221
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
.....+|+.++++||.++.+.+ .||+++|+|+||++++.++.++|+.++|+|+.+++.|+.+.
T Consensus 75 -~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 -GSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred -CcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 1456889999999999998876 69999999999999999999999999999999999998754
|
This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. |
| >PLN02511 hydrolase | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.5e-12 Score=139.61 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=92.3
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
..++..+.+.||..+....+.+.........|+||++||..+.+.. .|.......+.++||.|+++|+||.|+-..
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~-~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~--- 145 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDD-SYVRHMLLRARSKGWRVVVFNSRGCADSPV--- 145 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHCCCEEEEEecCCCCCCCC---
Confidence 3455567788998887644432211123456999999998776553 233222233334699999999999554321
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc--eeEEEEcCCcchh
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL--YGAALILVGALDM 672 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l--f~a~i~~~~~~d~ 672 (783)
.. .........+|+.+++++|..+. ...++.++|+|+||.+++..+.++|+. +.++++.++..|+
T Consensus 146 ~~-~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l 212 (388)
T PLN02511 146 TT-PQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL 212 (388)
T ss_pred CC-cCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH
Confidence 00 01112345789999999998752 235899999999999999999999986 5666655554443
|
|
| >COG2267 PldB Lysophospholipase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-12 Score=134.82 Aligned_cols=225 Identities=17% Similarity=0.131 Sum_probs=141.3
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
..+..+.+.||.++.+....+.. .+..+||.+||....... |.. ....|..+||.|+..|.||.|...+ .+
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~r--y~~-la~~l~~~G~~V~~~D~RGhG~S~r--~~ 79 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSGR--YEE-LADDLAARGFDVYALDLRGHGRSPR--GQ 79 (298)
T ss_pred cccceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHHH--HHH-HHHHHHhCCCEEEEecCCCCCCCCC--CC
Confidence 44556778899999888876553 233899999998665543 222 3455666899999999999776643 12
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCC--CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh---ccccc-
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKY--TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR---FNKFT- 679 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~--~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~---~~~~~- 679 (783)
.|. -..|.|.+..++.+++.-. .-..++.++||||||++++.++.+++..+.++|+.+|++.+.. .....
T Consensus 80 rg~----~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~ 155 (298)
T COG2267 80 RGH----VDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILAR 155 (298)
T ss_pred cCC----chhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHH
Confidence 122 1225666665555544311 1236899999999999999999999999999999999988762 11000
Q ss_pred ----ccccchhhh--CC-------C----CCHHHHHHHHhcCccc-----------------C--CCCCCCCCcCCcEEE
Q psy2521 680 ----IAYYSESEF--GS-------P----NNKTHFHNLLSYSPLH-----------------N--IKVPPNNTQYPATLV 723 (783)
Q Consensus 680 ----~~~~~~~~~--g~-------p----~~~~~~~~~~~~sp~~-----------------~--v~~~~~~~~~P~~Li 723 (783)
....+...+ +. . .+++..+.+ .-.|+- . .......+..| +||
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~-~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P-vLl 233 (298)
T COG2267 156 LALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY-EADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP-VLL 233 (298)
T ss_pred HhcccccccccccccCcccccCcCcchhhcCHHHHHHH-hcCCccccCCccHHHHHHHHHhhcccchhccccccCC-EEE
Confidence 000000000 00 0 112221111 112210 0 00000136778 999
Q ss_pred EecCCCCCCC-cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 724 LTGDHDDRVP-PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 724 ~~g~~D~~V~-~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
++|+.|..|+ ...+.++++++... ...+.+++++.|......
T Consensus 234 l~g~~D~vv~~~~~~~~~~~~~~~~---------~~~~~~~~g~~He~~~E~ 276 (298)
T COG2267 234 LQGGDDRVVDNVEGLARFFERAGSP---------DKELKVIPGAYHELLNEP 276 (298)
T ss_pred EecCCCccccCcHHHHHHHHhcCCC---------CceEEecCCcchhhhcCc
Confidence 9999999999 67777777776543 268999999999875433
|
|
| >COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.1e-12 Score=126.24 Aligned_cols=211 Identities=15% Similarity=0.128 Sum_probs=142.3
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC--
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK-- 611 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~-- 611 (783)
.+|.+-+++++.|.+.+ .+.|+||++||+.+......-...+.++.++.||.|+.|| ++.++|+..+...+
T Consensus 42 ~~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~ 114 (312)
T COG3509 42 VNGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFG 114 (312)
T ss_pred cCCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCC
Confidence 36788899999999863 4559999999987765332222234466677899999993 36666644443333
Q ss_pred ------CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc-h-hhhccccccccc
Q psy2521 612 ------KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL-D-MLRFNKFTIAYY 683 (783)
Q Consensus 612 ------~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~-d-~~~~~~~~~~~~ 683 (783)
+..+...+.+.+..|+.+.-+||+||.|.|.|+||.|+.+++..+|++|+|+...++.. + ..+... ..-.
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~~~~--rp~~ 192 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVACTPP--RPVS 192 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCcccCCC--Cchh
Confidence 45567888889999999989999999999999999999999999999999998888765 2 211110 0000
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCC-------------
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS------------- 750 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~------------- 750 (783)
.+..-|.+.. ..|++--.. - |-+|..|-.|+.....+..+.+......
T Consensus 193 ~m~~~G~~Dp---------~~p~~gG~~---------~-~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~ 253 (312)
T COG3509 193 VMAFHGTADP---------LNPYHGGGV---------P-IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGT 253 (312)
T ss_pred HHHhcCCCCC---------CCCCCCCCc---------c-cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccc
Confidence 1111122211 234443222 2 7789999888666666666665543210
Q ss_pred ---CCCCCCcEEEEEeCCCCccCCc
Q psy2521 751 ---LPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 751 ---~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
...++.++++..+.+.||....
T Consensus 254 ~~~~~~~~~~V~~y~i~g~GH~wp~ 278 (312)
T COG3509 254 DYDTCDGNARVELYTIDGGGHTWPG 278 (312)
T ss_pred eeeccCCCcceEEEEEeCCcccCcC
Confidence 0134568999999999998764
|
|
| >PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.3e-12 Score=120.22 Aligned_cols=145 Identities=21% Similarity=0.268 Sum_probs=102.7
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 636 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~r 636 (783)
+||++||+.+... .|.. +...++++||.++.+|+||.+... . ..+....++++.+. ..++++
T Consensus 1 ~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~~~~~~~~~~---~-----------~~~~~~~~~~~~~~-~~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWGGSRR--DYQP-LAEALAEQGYAVVAFDYPGHGDSD---G-----------ADAVERVLADIRAG-YPDPDR 62 (145)
T ss_dssp EEEEECTTTTTTH--HHHH-HHHHHHHTTEEEEEESCTTSTTSH---H-----------SHHHHHHHHHHHHH-HCTCCE
T ss_pred CEEEECCCCCCHH--HHHH-HHHHHHHCCCEEEEEecCCCCccc---h-----------hHHHHHHHHHHHhh-cCCCCc
Confidence 5899999866533 2443 345556679999999999965431 1 11444445544332 238899
Q ss_pred EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC
Q psy2521 637 ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT 716 (783)
Q Consensus 637 i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~ 716 (783)
|+++|+|+||.++..++.+. ..++++|+..|+.+ .+.+ .. .
T Consensus 63 i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~----------------------~~~~---------~~-------~ 103 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD----------------------SEDL---------AK-------I 103 (145)
T ss_dssp EEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG----------------------CHHH---------TT-------T
T ss_pred EEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc----------------------hhhh---------hc-------c
Confidence 99999999999999999987 67899999888311 0111 11 2
Q ss_pred cCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 717 QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 717 ~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
+.| +|+++|.+|..+++.+..+++++++ .+.++.++++++|+
T Consensus 104 ~~p-v~~i~g~~D~~~~~~~~~~~~~~~~----------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 104 RIP-VLFIHGENDPLVPPEQVRRLYEALP----------GPKELYIIPGAGHF 145 (145)
T ss_dssp TSE-EEEEEETT-SSSHHHHHHHHHHHHC----------SSEEEEEETTS-TT
T ss_pred CCc-EEEEEECCCCcCCHHHHHHHHHHcC----------CCcEEEEeCCCcCc
Confidence 334 9999999999999999999888876 25789999999995
|
... |
| >TIGR03611 RutD pyrimidine utilization protein D | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-12 Score=135.27 Aligned_cols=198 Identities=16% Similarity=0.161 Sum_probs=119.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
.+.|+||++||..+.... |.. ....|. +||.|+++|+||.|...... .....++|....+..+++. .
T Consensus 11 ~~~~~iv~lhG~~~~~~~--~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~ 77 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSY--WAP-QLDVLT-QRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--L 77 (257)
T ss_pred CCCCEEEEEcCCCcchhH--HHH-HHHHHH-hccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--h
Confidence 356899999998665532 332 345666 48999999999955433111 1112355555555544443 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--c---------c-------------ccccchhhh
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--F---------T-------------IAYYSESEF 688 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~--~---------~-------------~~~~~~~~~ 688 (783)
+..++.++|+|+||+++..++.++|+.++++|...++.+...... + . ....|....
T Consensus 78 ~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (257)
T TIGR03611 78 NIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISEN 157 (257)
T ss_pred CCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhcc
Confidence 456899999999999999999999998899888776443210000 0 0 000111000
Q ss_pred C------------C-CCCHH---HHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 689 G------------S-PNNKT---HFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 689 g------------~-p~~~~---~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
. . ..... .+..+..++....++. ++.| +|+++|++|..+++.++.++++.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~----- 227 (257)
T TIGR03611 158 AARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDR----IQHP-VLLIANRDDMLVPYTQSLRLAAALPNA----- 227 (257)
T ss_pred chhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcc----cCcc-EEEEecCcCcccCHHHHHHHHHhcCCc-----
Confidence 0 0 00000 0111122222223333 5667 999999999999999888877765432
Q ss_pred CCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 753 YQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
.+..++++||.+.-...+.+.
T Consensus 228 ------~~~~~~~~gH~~~~~~~~~~~ 248 (257)
T TIGR03611 228 ------QLKLLPYGGHASNVTDPETFN 248 (257)
T ss_pred ------eEEEECCCCCCccccCHHHHH
Confidence 567789999997655555443
|
This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067. |
| >TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=136.92 Aligned_cols=200 Identities=16% Similarity=0.071 Sum_probs=112.8
Q ss_pred CccEEEEecCCCCCccCCc-CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
..|.||++||.......+. +...+..++. .||.|+++|+||.|........ ........+|+.+.++. .
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~-~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~------l 98 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVD-AGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDA------L 98 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHh-CCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHH------c
Confidence 3477999999654433221 1122334444 5999999999995443211000 00001123444444433 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh------------cccc-ccc--cc---chhhh-CCC-C
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR------------FNKF-TIA--YY---SESEF-GSP-N 692 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~------------~~~~-~~~--~~---~~~~~-g~p-~ 692 (783)
+.+++.++|||+||.++..++.++|++++++|+..|...... .... ... .. +...+ -++ .
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 456999999999999999999999999999998766321000 0000 000 00 00000 000 0
Q ss_pred -C--------------HHHHHHHH-h--cCcc------cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 693 -N--------------KTHFHNLL-S--YSPL------HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 693 -~--------------~~~~~~~~-~--~sp~------~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
. ++....+. . ..++ ..++. +++| +|+++|.+|..|++..+.++++.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vlli~G~~D~~v~~~~~~~~~~~~~~-- 251 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGE----IKAK-TLVTWGRDDRFVPLDHGLKLLWNMPD-- 251 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhh----CCCC-EEEEEccCCCcCCchhHHHHHHhCCC--
Confidence 0 11111111 0 1111 11222 6777 99999999999999888888776643
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
.++.+++++||.........+.
T Consensus 252 ---------~~~~~i~~agH~~~~e~p~~~~ 273 (282)
T TIGR03343 252 ---------AQLHVFSRCGHWAQWEHADAFN 273 (282)
T ss_pred ---------CEEEEeCCCCcCCcccCHHHHH
Confidence 3678889999998655554443
|
Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself. |
| >PRK00870 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-11 Score=131.87 Aligned_cols=130 Identities=15% Similarity=0.168 Sum_probs=86.1
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
+..+.+.+...+|.++...+.. .+ +...|+||++||.+..... |.. ....|.++||.|+++|+||.|.....
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~-~G---~~~~~~lvliHG~~~~~~~--w~~-~~~~L~~~gy~vi~~Dl~G~G~S~~~- 90 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVD-EG---PADGPPVLLLHGEPSWSYL--YRK-MIPILAAAGHRVIAPDLIGFGRSDKP- 90 (302)
T ss_pred CCceeEeecCCCCceEEEEEEe-cC---CCCCCEEEEECCCCCchhh--HHH-HHHHHHhCCCEEEEECCCCCCCCCCC-
Confidence 3456666776677766655432 22 1235789999997654433 443 33556656999999999995432110
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.......+++..+.+..++++ .+.+++.++|||+||.++..++.++|++.+++|...+
T Consensus 91 -----~~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 91 -----TRREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred -----CCcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 011123456666655555554 2345899999999999999999999999999988765
|
|
| >COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.1e-12 Score=118.61 Aligned_cols=169 Identities=19% Similarity=0.160 Sum_probs=116.9
Q ss_pred CCccEEEEecC--CCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 553 RRNPVIIYGYG--GYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 553 ~~~P~ll~~hG--g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
...|+.|..|- -++.++..--.....+.|.++||.++.+|+||-|.. +|...++..+.+|..++++||.++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S------~G~fD~GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRS------QGEFDNGIGELEDAAAALDWLQARH 99 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccc------cCcccCCcchHHHHHHHHHHHHhhC
Confidence 34555555554 344455433333455667778999999999995543 3445667778999999999999885
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCC
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIK 710 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~ 710 (783)
--. .-..+.|+|.|+++++.++.++|+. ...|+..|.++. | ++ |- +.
T Consensus 100 p~s-~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~-----------~-----------df------s~---l~ 146 (210)
T COG2945 100 PDS-ASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA-----------Y-----------DF------SF---LA 146 (210)
T ss_pred CCc-hhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc-----------h-----------hh------hh---cc
Confidence 433 2358899999999999999999875 455666665541 1 01 11 11
Q ss_pred CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 711 ~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
| ...| .|+++|+.|+.|.+....++.+. .+..+++.++++|.|.......
T Consensus 147 -P---~P~~-~lvi~g~~Ddvv~l~~~l~~~~~------------~~~~~i~i~~a~HFF~gKl~~l 196 (210)
T COG2945 147 -P---CPSP-GLVIQGDADDVVDLVAVLKWQES------------IKITVITIPGADHFFHGKLIEL 196 (210)
T ss_pred -C---CCCC-ceeEecChhhhhcHHHHHHhhcC------------CCCceEEecCCCceecccHHHH
Confidence 1 3344 99999999999988877776543 4567888899999997654433
|
|
| >TIGR01607 PST-A Plasmodium subtelomeric family (PST-A) | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.1e-11 Score=133.64 Aligned_cols=225 Identities=16% Similarity=0.052 Sum_probs=127.0
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-----------------------CcCcHHHHHHHHcCCEE
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-----------------------PTFSISRCMFLRHFNGI 587 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-----------------------~~~~~~~~~~l~~~G~~ 587 (783)
+.+.||.+|......|+ .+..+|+++||-.+.... +.|...+...|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56789999988877764 345799999995444321 01223455667678999
Q ss_pred EEEecCCCCCCCC-hhHHhhccccCCcChHHHHHHHHHHHHHc------------------CCCCCCcEEEEEeChhHHH
Q psy2521 588 YAIPNIRGGGELG-EDWHNAGRLLKKQNCFDDFQAAAEYMINK------------------KYTKPKYITIMGGSNGGLL 648 (783)
Q Consensus 588 v~~~~~RG~g~~G-~~~~~~g~~~~~~~~~~D~~a~~~~l~~~------------------~~~d~~ri~i~G~S~GG~l 648 (783)
|+..|.||.|... ... ..+.-..-....+|+...++.+.+. .+-....+.|+||||||++
T Consensus 77 V~~~D~rGHG~S~~~~~-~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQN-LRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred EEEecccccCCCccccc-cccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999976432 211 0111111112235555555555431 1111347999999999999
Q ss_pred HHHHHhcCCC--------ceeEEEEcCCcchhhhcc-----------------------cccccc-cchh---h----h-
Q psy2521 649 VGACLNQRPE--------LYGAALILVGALDMLRFN-----------------------KFTIAY-YSES---E----F- 688 (783)
Q Consensus 649 ~~~~~~~~p~--------lf~a~i~~~~~~d~~~~~-----------------------~~~~~~-~~~~---~----~- 688 (783)
+..++...++ .++++|+.+|++.+.... .+.... .|.. + +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 9988765432 578888888765431100 000000 0000 0 0
Q ss_pred CCCC------CHHHHHHHHhcCc--ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q psy2521 689 GSPN------NKTHFHNLLSYSP--LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL 760 (783)
Q Consensus 689 g~p~------~~~~~~~~~~~sp--~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l 760 (783)
-+|. ....+..+..... ...++.. ....| +|+++|..|..|++..+.++++++... ...+
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i--~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~~---------~~~l 303 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYI--PKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSIS---------NKEL 303 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhC--CCCCC-EEEEEeCCCCccCHHHHHHHHHhccCC---------CcEE
Confidence 0010 0000011111100 0111110 02466 999999999999999988877765432 3578
Q ss_pred EEeCCCCccCCcc
Q psy2521 761 RVEQDAGHGQGKA 773 (783)
Q Consensus 761 ~~~~~~gHg~~~~ 773 (783)
.++++++|.....
T Consensus 304 ~~~~g~~H~i~~E 316 (332)
T TIGR01607 304 HTLEDMDHVITIE 316 (332)
T ss_pred EEECCCCCCCccC
Confidence 8899999998654
|
These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii. |
| >TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.3e-12 Score=130.39 Aligned_cols=196 Identities=14% Similarity=0.101 Sum_probs=115.8
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|+||++||...... .|.. ....|. .||.|+++|+||.|.... ......++++.+.+..+++. .+
T Consensus 12 ~~~~li~~hg~~~~~~--~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~~~~i~~--~~ 77 (251)
T TIGR02427 12 GAPVLVFINSLGTDLR--MWDP-VLPALT-PDFRVLRYDKRGHGLSDA--------PEGPYSIEDLADDVLALLDH--LG 77 (251)
T ss_pred CCCeEEEEcCcccchh--hHHH-HHHHhh-cccEEEEecCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHH--hC
Confidence 5689999999644433 2332 345566 599999999999654321 11233566777766666654 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc------------ccc-----ccccch-hhhCCCCCH-
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------------KFT-----IAYYSE-SEFGSPNNK- 694 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~------------~~~-----~~~~~~-~~~g~p~~~- 694 (783)
.+++.++|+|+||.++..++.++|+.++++|+..+...+.... ... ....|. ..+..+...
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPAR 157 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHH
Confidence 4689999999999999999999999988888766532211000 000 000000 011111100
Q ss_pred -HHHH----------------HHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc
Q psy2521 695 -THFH----------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757 (783)
Q Consensus 695 -~~~~----------------~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 757 (783)
+.+. .+........++. ++.| +|+++|.+|..+++....++.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-vlii~g~~D~~~~~~~~~~~~~~~~~----------- 221 (251)
T TIGR02427 158 LDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGA----IAVP-TLCIAGDQDGSTPPELVREIADLVPG----------- 221 (251)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhh----cCCC-eEEEEeccCCcCChHHHHHHHHhCCC-----------
Confidence 0111 0111111122222 5667 99999999999999877766655432
Q ss_pred EEEEEeCCCCccCCccchhhhh
Q psy2521 758 LLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 758 ~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
..+.+++++||...-...+.+.
T Consensus 222 ~~~~~~~~~gH~~~~~~p~~~~ 243 (251)
T TIGR02427 222 ARFAEIRGAGHIPCVEQPEAFN 243 (251)
T ss_pred ceEEEECCCCCcccccChHHHH
Confidence 3678889999986544444433
|
Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. |
| >COG0400 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=121.09 Aligned_cols=181 Identities=16% Similarity=0.142 Sum_probs=120.5
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh---hHHhhccccCC--cChHHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE---DWHNAGRLLKK--QNCFDDFQAAAEYM 626 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~---~~~~~g~~~~~--~~~~~D~~a~~~~l 626 (783)
+...|+||+.||-.+.. ..|.+ +..++.- ...++.++-+=.-+.|. .|...+..+.+ ......+.+.++.+
T Consensus 15 ~p~~~~iilLHG~Ggde--~~~~~-~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~ 90 (207)
T COG0400 15 DPAAPLLILLHGLGGDE--LDLVP-LPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEEL 90 (207)
T ss_pred CCCCcEEEEEecCCCCh--hhhhh-hhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHH
Confidence 45678999999954332 23443 3344432 45555443322212222 33333322211 11233444555666
Q ss_pred HHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcc
Q psy2521 627 INKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPL 706 (783)
Q Consensus 627 ~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~ 706 (783)
..+.-++++|+.+.|+|+|+.+++.++.++|++|+++|+..|+.=... . +.
T Consensus 91 ~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------~---------~~ 141 (207)
T COG0400 91 AEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------E---------LL 141 (207)
T ss_pred HHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------c---------cc
Confidence 666778999999999999999999999999999999999888652100 0 11
Q ss_pred cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 707 HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 707 ~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
.+. ...| +|++||..|++||..++.++.+.|++. |..++.+.++ .||.....+-..+.+
T Consensus 142 ~~~------~~~p-ill~hG~~Dpvvp~~~~~~l~~~l~~~-------g~~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 142 PDL------AGTP-ILLSHGTEDPVVPLALAEALAEYLTAS-------GADVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred ccc------CCCe-EEEeccCcCCccCHHHHHHHHHHHHHc-------CCCEEEEEec-CCCcCCHHHHHHHHH
Confidence 111 1333 999999999999999999999999998 9999999998 899987665555444
|
|
| >PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate [] | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-11 Score=130.53 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=123.3
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
..+..+++.++-. |..|++++..|++ +++.|+||+.-|--+...+ +...+...++.+|++++++|..|-|+..
T Consensus 161 ~~~~i~~v~iP~e-g~~I~g~LhlP~~---~~p~P~VIv~gGlDs~qeD--~~~l~~~~l~~rGiA~LtvDmPG~G~s~- 233 (411)
T PF06500_consen 161 SDYPIEEVEIPFE-GKTIPGYLHLPSG---EKPYPTVIVCGGLDSLQED--LYRLFRDYLAPRGIAMLTVDMPGQGESP- 233 (411)
T ss_dssp SSSEEEEEEEEET-TCEEEEEEEESSS---SS-EEEEEEE--TTS-GGG--GHHHHHCCCHHCT-EEEEE--TTSGGGT-
T ss_pred CCCCcEEEEEeeC-CcEEEEEEEcCCC---CCCCCEEEEeCCcchhHHH--HHHHHHHHHHhCCCEEEEEccCCCcccc-
Confidence 3567889988864 5899999999884 5789999987554333322 2222223345579999999999966432
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc-chhhhc----c
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA-LDMLRF----N 676 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~-~d~~~~----~ 676 (783)
.|- . .+....=..++++||.+..++|..||+++|.|+||+.+..++...+++++|+|+..|+ .+++.- .
T Consensus 234 ~~~-----l-~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~ 307 (411)
T PF06500_consen 234 KWP-----L-TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQ 307 (411)
T ss_dssp TT------S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHT
T ss_pred cCC-----C-CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHh
Confidence 221 1 1122223458899999999999999999999999999999987777788998887775 344321 1
Q ss_pred c--ccccccchhhhCCCC-CH-HHHHHHHhcCcccC-CC-CCCCCCcCCcEEEEecCCCCCCCcHHHHHHH
Q psy2521 677 K--FTIAYYSESEFGSPN-NK-THFHNLLSYSPLHN-IK-VPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 677 ~--~~~~~~~~~~~g~p~-~~-~~~~~~~~~sp~~~-v~-~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~ 741 (783)
. ......+...+|... +. .....+..+|-... +- .. ..++| +|.+.+.+|+.+|.+++.-++
T Consensus 308 ~~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~r--r~~~p-lL~i~~~~D~v~P~eD~~lia 375 (411)
T PF06500_consen 308 RVPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGR--RCPTP-LLAINGEDDPVSPIEDSRLIA 375 (411)
T ss_dssp TS-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS---BSS--EEEEEETT-SSS-HHHHHHHH
T ss_pred cCCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCC--CCCcc-eEEeecCCCCCCCHHHHHHHH
Confidence 1 000111224556542 22 23345677776543 21 11 25677 999999999999988875443
|
This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C. |
| >TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein | Back alignment and domain information |
|---|
Probab=99.33 E-value=4.1e-11 Score=125.98 Aligned_cols=104 Identities=12% Similarity=0.043 Sum_probs=73.5
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|+||++||..+.... |.. ....|++ +|.|+++|+||.|..... ......++++.+.+..++++ .+
T Consensus 27 ~~~~vv~~hG~~~~~~~--~~~-~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~i~~--~~ 93 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHS--WRD-LMPPLAR-SFRVVAPDLPGHGFTRAP-------FRFRFTLPSMAEDLSALCAA--EG 93 (278)
T ss_pred CCCeEEEEcCCCCCHHH--HHH-HHHHHhh-CcEEEeecCCCCCCCCCc-------cccCCCHHHHHHHHHHHHHH--cC
Confidence 35899999997665433 333 3455664 899999999995532211 11124566777776666654 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.+++.|+|||+||.+++.++.++|+..+++|+..+..
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcc
Confidence 3578999999999999999999999888888776643
|
Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity. |
| >PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.5e-12 Score=131.90 Aligned_cols=141 Identities=23% Similarity=0.245 Sum_probs=90.5
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc------------c---CCcCcHHHHHHHHcCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS------------V---LPTFSISRCMFLRHFN 585 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~------------~---~~~~~~~~~~~l~~~G 585 (783)
...|..|++.|.+.++..||++++.|++. .++.|.||++||..+.. . .......+...|+++|
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 35789999999999999999999999986 68999999999842211 0 0001122455677889
Q ss_pred EEEEEecCCCCCCCChh-----------------HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHH
Q psy2521 586 GIYAIPNIRGGGELGED-----------------WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLL 648 (783)
Q Consensus 586 ~~v~~~~~RG~g~~G~~-----------------~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l 648 (783)
|+|+++|.+|-||.|.. +...|+...+...++| +.+++||..+..+|++||+++|+|+||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~dd-mr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDD-MRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHH-HHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHH-HHHHHHHhcCcccCccceEEEeecccHHH
Confidence 99999999997766541 1112222233344555 45999999999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEE
Q psy2521 649 VGACLNQRPELYGAALI 665 (783)
Q Consensus 649 ~~~~~~~~p~lf~a~i~ 665 (783)
+..++...+.. +|+|+
T Consensus 240 a~~LaALDdRI-ka~v~ 255 (390)
T PF12715_consen 240 AWWLAALDDRI-KATVA 255 (390)
T ss_dssp HHHHHHH-TT---EEEE
T ss_pred HHHHHHcchhh-HhHhh
Confidence 99999987655 44443
|
|
| >TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=126.80 Aligned_cols=109 Identities=16% Similarity=0.058 Sum_probs=75.8
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
++.|.||++||+++.+.. +......++.+.||.|+.+|.||.|... ... .......++++.+.+..+++. .
T Consensus 23 ~~~~~vl~~hG~~g~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~---~~~--~~~~~~~~~~~~~~~~~~~~~--~ 93 (288)
T TIGR01250 23 GEKIKLLLLHGGPGMSHE--YLENLRELLKEEGREVIMYDQLGCGYSD---QPD--DSDELWTIDYFVDELEEVREK--L 93 (288)
T ss_pred CCCCeEEEEcCCCCccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCC---CCC--cccccccHHHHHHHHHHHHHH--c
Confidence 345789999999876543 2233445666559999999999955321 100 001023466666666666654 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+.+++.++|||+||.++..++.++|+.++++|...++.
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 34579999999999999999999999999998877643
|
This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase |
| >PRK11071 esterase YqiA; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-11 Score=119.55 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=106.6
Q ss_pred cEEEEecCCCCCccCCcCcHH-HHHHHHc--CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSIS-RCMFLRH--FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~-~~~~l~~--~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
|.||++||..+.... |... ...++.+ .+|.++++|+|| ++ ++..+.++.++++.
T Consensus 2 p~illlHGf~ss~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g---~~----------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSSPRS--AKATLLKNWLAQHHPDIEMIVPQLPP---YP----------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCCcch--HHHHHHHHHHHHhCCCCeEEeCCCCC---CH----------------HHHHHHHHHHHHHc--
Confidence 789999997665543 3321 2344543 379999999998 32 24455556666542
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhh-C--CCCCHHHHHHHHhcCcccCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF-G--SPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~-g--~p~~~~~~~~~~~~sp~~~v 709 (783)
+.+++.++|+|+||++++.++.++|. + +|..+|..+.......-.+... ..+ + .+-..+.++.++.+.+.. +
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~-i 133 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDYLGENE-NPYTGQQYVLESRHIYDLKVMQIDP-L 133 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHhcCCcc-cccCCCcEEEcHHHHHHHHhcCCcc-C
Confidence 23589999999999999999999884 3 4566776664222110001000 001 1 111234444455454433 3
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+. ..| ++|+||+.|..||+.++.++++.. .+.++++++|.|...
T Consensus 134 ~~-----~~~-v~iihg~~De~V~~~~a~~~~~~~--------------~~~~~~ggdH~f~~~ 177 (190)
T PRK11071 134 ES-----PDL-IWLLQQTGDEVLDYRQAVAYYAAC--------------RQTVEEGGNHAFVGF 177 (190)
T ss_pred CC-----hhh-EEEEEeCCCCcCCHHHHHHHHHhc--------------ceEEECCCCcchhhH
Confidence 32 334 899999999999999999998842 244669999999654
|
|
| >PLN02872 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.3e-11 Score=134.77 Aligned_cols=146 Identities=18% Similarity=0.213 Sum_probs=97.6
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCc-CCCCCccEEEEecCCCCCccCCcCc---HHHHHHHHcCCEEEEEecCCCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGA-LRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~-~~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
...|.+|+..+++.||..+.+.-+.+... ....+.|+|++.||....+..+... ......|+++||.|.++|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 45789999999999999998877643321 1123468899999987666544322 1233456667999999999995
Q ss_pred C-CCChhHHhhc-cc----cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcC
Q psy2521 597 G-ELGEDWHNAG-RL----LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILV 667 (783)
Q Consensus 597 g-~~G~~~~~~g-~~----~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~ 667 (783)
+ .+|+...... .. .+......|+.++++++.+.. .+++.++|||+||.++.+++ .+|+ .++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 4 2342221111 10 111223469999999997642 36899999999999998666 5687 456666666
Q ss_pred Ccc
Q psy2521 668 GAL 670 (783)
Q Consensus 668 ~~~ 670 (783)
|+.
T Consensus 195 P~~ 197 (395)
T PLN02872 195 PIS 197 (395)
T ss_pred chh
Confidence 643
|
|
| >TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-10 Score=122.44 Aligned_cols=132 Identities=12% Similarity=0.001 Sum_probs=90.9
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
+++.+.. +|..+.+.+..|.+ .+.+.||++|||++..... .........|+++||.++++|+||.|.....
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~--- 74 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE--- 74 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC---
Confidence 3566664 67889999998864 2346788888876544322 1122345666668999999999996543211
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
........+|+.+++++|.++. ...++|.++|+|+||++++.++.. +..++++|+.+|.+.
T Consensus 75 ---~~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 75 ---NLGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred ---CCCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 1111234689999999998651 123579999999999999888765 567899999998753
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily. |
| >PLN00021 chlorophyllase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.3e-10 Score=123.26 Aligned_cols=199 Identities=18% Similarity=0.188 Sum_probs=126.4
Q ss_pred CCCCCCeEEEEEEE--CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC
Q psy2521 519 FEPTLFQTKQVYFR--SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 519 ~~~~~~~~~~~~~~--s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
|+...+.+....+. +.-...+|+.++.|.. .++.|+||++||+.+... +.......|+++||+|+++|++|.
T Consensus 17 ~~~g~~~~~~~~~~~~~~~~~~~p~~v~~P~~---~g~~PvVv~lHG~~~~~~---~y~~l~~~Las~G~~VvapD~~g~ 90 (313)
T PLN00021 17 FETGKFPVELITVDESSRPSPPKPLLVATPSE---AGTYPVLLFLHGYLLYNS---FYSQLLQHIASHGFIVVAPQLYTL 90 (313)
T ss_pred cccCCceeEEEEecCCCcCCCCceEEEEeCCC---CCCCCEEEEECCCCCCcc---cHHHHHHHHHhCCCEEEEecCCCc
Confidence 44445544444332 2334568999999975 578999999999865432 222344566778999999999883
Q ss_pred CCCChhHHhhccccCCcChHHHHHHHHHHHHHc--------CCCCCCcEEEEEeChhHHHHHHHHhcCCC-----ceeEE
Q psy2521 597 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK--------KYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAA 663 (783)
Q Consensus 597 g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~--------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-----lf~a~ 663 (783)
+.. .....++|..++++|+.+. ...|++|++|+|||+||+++..++..+|+ .|+++
T Consensus 91 ~~~-----------~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~al 159 (313)
T PLN00021 91 AGP-----------DGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSAL 159 (313)
T ss_pred CCC-----------CchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeE
Confidence 211 1123456777778888652 23677899999999999999999988875 57888
Q ss_pred EEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCc-ccCCCCCCCCCcCCcEEEEecCCCC-----CC----C
Q psy2521 664 LILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP-LHNIKVPPNNTQYPATLVLTGDHDD-----RV----P 733 (783)
Q Consensus 664 i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp-~~~v~~~~~~~~~P~~Li~~g~~D~-----~V----~ 733 (783)
|...|+..+... ....+.. ..+.| ..+ +..| +||+++..|. .+ |
T Consensus 160 i~ldPv~g~~~~--------------~~~~p~i----l~~~~~s~~-------~~~P-~liig~g~~~~~~~~~~p~~ap 213 (313)
T PLN00021 160 IGLDPVDGTSKG--------------KQTPPPV----LTYAPHSFN-------LDIP-VLVIGTGLGGEPRNPLFPPCAP 213 (313)
T ss_pred Eeeccccccccc--------------cCCCCcc----cccCccccc-------CCCC-eEEEecCCCcccccccccccCC
Confidence 887776543211 0001100 01111 112 3456 8888888663 22 2
Q ss_pred cH-HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 734 PL-HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 734 ~~-~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.. +-++|+.+. +.+..+++.+++||.-
T Consensus 214 ~~~~~~~f~~~~----------~~~~~~~~~~~~gH~~ 241 (313)
T PLN00021 214 DGVNHAEFFNEC----------KAPAVHFVAKDYGHMD 241 (313)
T ss_pred CCCCHHHHHHhc----------CCCeeeeeecCCCcce
Confidence 33 336666554 4467888889999974
|
|
| >COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=9.9e-11 Score=119.30 Aligned_cols=213 Identities=17% Similarity=0.188 Sum_probs=133.1
Q ss_pred EEECCCCcEEEEEEEE-ecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc
Q psy2521 530 YFRSKDGTRVPMYIIH-RVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 608 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~-p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~ 608 (783)
.+...||-.+-.-... |. +.+.|+||.+||--|.+..+ |...+...+.++||.++++|.||.++--. .. .
T Consensus 53 ~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n--~~--p 123 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSP-YARGLMRALSRRGWLVVVFHFRGCSGEAN--TS--P 123 (345)
T ss_pred EEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCH-HHHHHHHHHHhcCCeEEEEecccccCCcc--cC--c
Confidence 4455666555443333 33 35669999999988887776 77777777777899999999999543221 00 0
Q ss_pred ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhH-HHHHHHHhcC--CCceeEEEEcCCcchhh-hccccccccc-
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG-LLVGACLNQR--PELYGAALILVGALDML-RFNKFTIAYY- 683 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG-~l~~~~~~~~--p~lf~a~i~~~~~~d~~-~~~~~~~~~~- 683 (783)
...-....+|+..++++|++.+. +.++.++|.|.|| .|+..+..+. +-+-+|++..+|+ |+. ....+..+..
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~ 200 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEACAYRLDSGFSL 200 (345)
T ss_pred ceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHHHHHhcCchhh
Confidence 11112235899999999998754 6799999999999 5555555432 2244555555553 321 1110000000
Q ss_pred --c------------------------------------hhhhC----CC--CCHHHHHHHHhcCcccCCCCCCCCCcCC
Q psy2521 684 --S------------------------------------ESEFG----SP--NNKTHFHNLLSYSPLHNIKVPPNNTQYP 719 (783)
Q Consensus 684 --~------------------------------------~~~~g----~p--~~~~~~~~~~~~sp~~~v~~~~~~~~~P 719 (783)
+ ..||- .| .-++..+++++.|++..+++ |+.|
T Consensus 201 ~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~----Ir~P 276 (345)
T COG0429 201 RLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPK----IRKP 276 (345)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccc----cccc
Confidence 0 00110 01 01123456788899888877 7888
Q ss_pred cEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 720 ATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 720 ~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
+||+|+.+|+.+++...-+.-.+ . +..+++..-+.+||-
T Consensus 277 -tLii~A~DDP~~~~~~iP~~~~~---~-------np~v~l~~t~~GGHv 315 (345)
T COG0429 277 -TLIINAKDDPFMPPEVIPKLQEM---L-------NPNVLLQLTEHGGHV 315 (345)
T ss_pred -eEEEecCCCCCCChhhCCcchhc---C-------CCceEEEeecCCceE
Confidence 99999999999988543332222 2 446888888889995
|
|
| >COG4099 Predicted peptidase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.6e-11 Score=118.20 Aligned_cols=176 Identities=13% Similarity=0.123 Sum_probs=120.1
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCc-cEEEEecCCCCCccCCcCcHHHHHHHHcC----------CEEEEEecCCCCCCCC
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRN-PVIIYGYGGYGVSVLPTFSISRCMFLRHF----------NGIYAIPNIRGGGELG 600 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~-P~ll~~hGg~~~~~~~~~~~~~~~~l~~~----------G~~v~~~~~RG~g~~G 600 (783)
...-|.+++..++.|++..+++++ |++|+.||+.....+.. ..+.... ++-|+.|- |.
T Consensus 167 d~~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~-----~~l~sg~gaiawa~pedqcfVlAPQ------y~ 235 (387)
T COG4099 167 DESTGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDND-----KVLSSGIGAIAWAGPEDQCFVLAPQ------YN 235 (387)
T ss_pred ccccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhh-----hhhhcCccceeeecccCceEEEccc------cc
Confidence 345688999999999999988888 99999999855443211 1222211 22333333 22
Q ss_pred hhHHhhccccCCcChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
.-|... ..+-.+...-.+..++ -|.++..+|.+||.+.|.|+||+.+.+++.++||+|+|+++.+|--|-
T Consensus 236 ~if~d~--e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------- 306 (387)
T COG4099 236 PIFADS--EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------- 306 (387)
T ss_pred cccccc--ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-------
Confidence 111111 1111233344455555 566777899999999999999999999999999999999998873331
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
+ ..++.. .+.| +.++|+.+|..+|.+.|+-.+++|+.. ++++.
T Consensus 307 -------------------------v-~lv~~l---k~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~-------~~kv~ 349 (387)
T COG4099 307 -------------------------V-YLVRTL---KKAP-IWVFHSSDDKVIPVSNSRVLYERLKAL-------DRKVN 349 (387)
T ss_pred -------------------------h-hhhhhh---ccCc-eEEEEecCCCccccCcceeehHHHHhh-------ccccc
Confidence 0 011111 2344 999999999999999999999999988 66665
Q ss_pred EEEeC
Q psy2521 760 LRVEQ 764 (783)
Q Consensus 760 l~~~~ 764 (783)
+..|.
T Consensus 350 Ytaf~ 354 (387)
T COG4099 350 YTAFL 354 (387)
T ss_pred hhhhh
Confidence 55544
|
|
| >TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-10 Score=124.87 Aligned_cols=122 Identities=21% Similarity=0.193 Sum_probs=80.3
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++...||.++..... + ....+.||++||+++..... .....+...+|.|+++|+||.|... . ..
T Consensus 8 ~~~~~~~~~l~y~~~---g---~~~~~~lvllHG~~~~~~~~----~~~~~~~~~~~~vi~~D~~G~G~S~---~---~~ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQS---G---NPDGKPVVFLHGGPGSGTDP----GCRRFFDPETYRIVLFDQRGCGKST---P---HA 71 (306)
T ss_pred eEEcCCCcEEEEEEC---c---CCCCCEEEEECCCCCCCCCH----HHHhccCccCCEEEEECCCCCCCCC---C---CC
Confidence 455567877765432 1 11245689999987765321 1223343358999999999944221 1 11
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
......+.|+.+.+..+++. .+.+++.++|+|+||+++..++.++|+.++++|+..++
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREK--LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 11123456777777777665 23458999999999999999999999988888776543
|
This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members. |
| >TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.1e-11 Score=121.95 Aligned_cols=191 Identities=15% Similarity=0.052 Sum_probs=110.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||..+... .|.. ....|. .+|.|+.+|+||.|... . .....++|+.. .+.+. . .
T Consensus 4 ~~~iv~~HG~~~~~~--~~~~-~~~~l~-~~~~vi~~d~~G~G~s~---~------~~~~~~~~~~~---~~~~~--~-~ 64 (245)
T TIGR01738 4 NVHLVLIHGWGMNAE--VFRC-LDEELS-AHFTLHLVDLPGHGRSR---G------FGPLSLADAAE---AIAAQ--A-P 64 (245)
T ss_pred CceEEEEcCCCCchh--hHHH-HHHhhc-cCeEEEEecCCcCccCC---C------CCCcCHHHHHH---HHHHh--C-C
Confidence 378999999655443 2432 335565 48999999999955321 0 11123444444 34332 1 2
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc--cc----------cc--cc-------ccch--hhhCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF--NK----------FT--IA-------YYSE--SEFGSP 691 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~--~~----------~~--~~-------~~~~--~~~g~p 691 (783)
+++.++|+|+||+++..++.++|++++++|...+...+... .. +. .. ..+. ..++.+
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTP 144 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999988888876553211000 00 00 00 0000 001211
Q ss_pred CCHHHH----------------------HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhC
Q psy2521 692 NNKTHF----------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 749 (783)
Q Consensus 692 ~~~~~~----------------------~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 749 (783)
...+.. ..+...+....+++ +++| +|+++|.+|..|++.....+.+.+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vlii~g~~D~~~~~~~~~~~~~~~~---- 215 (245)
T TIGR01738 145 TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQN----ISVP-FLRLYGYLDGLVPAKVVPYLDKLAP---- 215 (245)
T ss_pred ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhc----CCCC-EEEEeecCCcccCHHHHHHHHHhCC----
Confidence 111000 00000111111222 6777 9999999999999887776655443
Q ss_pred CCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 750 SLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 750 ~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
..++.+++++||...-...+.+.+
T Consensus 216 -------~~~~~~~~~~gH~~~~e~p~~~~~ 239 (245)
T TIGR01738 216 -------HSELYIFAKAAHAPFLSHAEAFCA 239 (245)
T ss_pred -------CCeEEEeCCCCCCccccCHHHHHH
Confidence 247888999999976555555544
|
This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria. |
| >PRK03204 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=123.20 Aligned_cols=122 Identities=16% Similarity=0.064 Sum_probs=82.2
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.+..+++. +|.++.+.. . +..|.||++||.+..+. .|.. ....|. ++|.|+++|+||.|..+..
T Consensus 14 ~~~~~~~~-~~~~i~y~~---~-----G~~~~iv~lHG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~--- 77 (286)
T PRK03204 14 FESRWFDS-SRGRIHYID---E-----GTGPPILLCHGNPTWSF--LYRD-IIVALR-DRFRCVAPDYLGFGLSERP--- 77 (286)
T ss_pred ccceEEEc-CCcEEEEEE---C-----CCCCEEEEECCCCccHH--HHHH-HHHHHh-CCcEEEEECCCCCCCCCCC---
Confidence 33344554 566664332 1 23578999999864332 2433 334565 4899999999995533210
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
......++++.+.+..++++ .+.+++.++|||+||.++..++..+|+.++++|...+.
T Consensus 78 ----~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 78 ----SGFGYQIDEHARVIGEFVDH--LGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred ----CccccCHHHHHHHHHHHHHH--hCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 11123467888888888775 24468999999999999999999999999998876553
|
|
| >PRK10673 acyl-CoA esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.1e-11 Score=122.24 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=68.6
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
....|+||++||.++.... |.. ....|. .+|.|+.+|.||.|+.... . ..++.+..+-+..+++.
T Consensus 13 ~~~~~~iv~lhG~~~~~~~--~~~-~~~~l~-~~~~vi~~D~~G~G~s~~~---~------~~~~~~~~~d~~~~l~~-- 77 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDN--LGV-LARDLV-NDHDIIQVDMRNHGLSPRD---P------VMNYPAMAQDLLDTLDA-- 77 (255)
T ss_pred CCCCCCEEEECCCCCchhH--HHH-HHHHHh-hCCeEEEECCCCCCCCCCC---C------CCCHHHHHHHHHHHHHH--
Confidence 4567999999998776543 333 234455 4899999999996643311 1 12344433333333332
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
...+++.++|||+||.++..++.++|++++++|..
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli 112 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEE
Confidence 23457999999999999999999999999998875
|
|
| >PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=8.4e-12 Score=125.91 Aligned_cols=192 Identities=17% Similarity=0.127 Sum_probs=113.4
Q ss_pred EEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcE
Q psy2521 558 IIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYI 637 (783)
Q Consensus 558 ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri 637 (783)
||++||..+... .|.. ....|+ +||.|+++|+||.|... ... ......+++..+.+..+++. ...+++
T Consensus 1 vv~~hG~~~~~~--~~~~-~~~~l~-~~~~v~~~d~~G~G~s~---~~~---~~~~~~~~~~~~~l~~~l~~--~~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSSE--SWDP-LAEALA-RGYRVIAFDLPGHGRSD---PPP---DYSPYSIEDYAEDLAELLDA--LGIKKV 68 (228)
T ss_dssp EEEE-STTTTGG--GGHH-HHHHHH-TTSEEEEEECTTSTTSS---SHS---SGSGGSHHHHHHHHHHHHHH--TTTSSE
T ss_pred eEEECCCCCCHH--HHHH-HHHHHh-CCCEEEEEecCCccccc---ccc---ccCCcchhhhhhhhhhcccc--cccccc
Confidence 789999877663 3444 345566 59999999999944332 111 11233456666655555554 223689
Q ss_pred EEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc------cc-c--cc------ccch-hhhCCCCCHHHH----
Q psy2521 638 TIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------KF-T--IA------YYSE-SEFGSPNNKTHF---- 697 (783)
Q Consensus 638 ~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~------~~-~--~~------~~~~-~~~g~p~~~~~~---- 697 (783)
.++|||+||.+++.++.++|+.++++|...|........ .+ . .. ..+. ..+......+.+
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLI 148 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccc
Confidence 999999999999999999999999999998877532210 00 0 00 0000 000000000000
Q ss_pred --------HHHH----hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 698 --------HNLL----SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 698 --------~~~~----~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
+.+. ...+...++. ++.| +++++|+.|..++.....++.+.+ ..+.+.++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p-vl~i~g~~D~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 212 (228)
T PF12697_consen 149 RSSRRALAEYLRSNLWQADLSEALPR----IKVP-VLVIHGEDDPIVPPESAEELADKL-----------PNAELVVIPG 212 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHG----SSSE-EEEEEETTSSSSHHHHHHHHHHHS-----------TTEEEEEETT
T ss_pred cccccccccccccccccccccccccc----cCCC-eEEeecCCCCCCCHHHHHHHHHHC-----------CCCEEEEECC
Confidence 0111 1111122222 4556 999999999999866555554443 2468899999
Q ss_pred CCccCCccchhh
Q psy2521 766 AGHGQGKALDIE 777 (783)
Q Consensus 766 ~gHg~~~~~~~~ 777 (783)
+||...-.....
T Consensus 213 ~gH~~~~~~p~~ 224 (228)
T PF12697_consen 213 AGHFLFLEQPDE 224 (228)
T ss_dssp SSSTHHHHSHHH
T ss_pred CCCccHHHCHHH
Confidence 999865443333
|
... |
| >TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.3e-10 Score=116.85 Aligned_cols=214 Identities=9% Similarity=-0.042 Sum_probs=129.8
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC--CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL--PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~--~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.+++++..|. +.++++.|.+ .++.|+||++||..+.... ..|. .....|+++||.|+.+|+||.|........
T Consensus 2 ~~~l~~~~g~-~~~~~~~p~~---~~~~~~VlllHG~g~~~~~~~~~~~-~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~ 76 (266)
T TIGR03101 2 PFFLDAPHGF-RFCLYHPPVA---VGPRGVVIYLPPFAEEMNKSRRMVA-LQARAFAAGGFGVLQIDLYGCGDSAGDFAA 76 (266)
T ss_pred CEEecCCCCc-EEEEEecCCC---CCCceEEEEECCCcccccchhHHHH-HHHHHHHHCCCEEEEECCCCCCCCCCcccc
Confidence 3566776776 4465555554 2457899999995432221 1122 223456667999999999995543211111
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc----c---
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----F--- 678 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~----~--- 678 (783)
.......+|+.+++++|.+.+ ..+|.++|+|+||.++..++.++|+.++++|...|+++...+.. +
T Consensus 77 ----~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~ 149 (266)
T TIGR03101 77 ----ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLV 149 (266)
T ss_pred ----CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHH
Confidence 111123588999999998764 46899999999999999999999999999999999877543321 0
Q ss_pred ---cccc-cc-----h---------hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEec-CCCCCCCcHHHHH
Q psy2521 679 ---TIAY-YS-----E---------SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTG-DHDDRVPPLHSYK 739 (783)
Q Consensus 679 ---~~~~-~~-----~---------~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g-~~D~~V~~~~~~~ 739 (783)
..+. .. . .-.|..-.++....|.+.....-+. ..+++|++.. ..+..-....+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 223 (266)
T TIGR03101 150 ARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVP------KNCPVHWFEVRPEEGATLSPVFSR 223 (266)
T ss_pred HHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCC------CCCceEEEEeccccCCCCCHHHHH
Confidence 0000 00 0 0012111222222333222111110 1223666655 3334445567789
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCC
Q psy2521 740 FIATLQEKIGSLPYQKNPLLLRVEQDA 766 (783)
Q Consensus 740 ~~~~L~~~~~~~~~~~~~~~l~~~~~~ 766 (783)
+++++++. |..++...+++.
T Consensus 224 l~~~~~~~-------g~~v~~~~~~~~ 243 (266)
T TIGR03101 224 LGEQWVQS-------GVEVTVDLVPGP 243 (266)
T ss_pred HHHHHHHc-------CCeEeeeecCCc
Confidence 99999999 999999999887
|
This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily. |
| >PRK03592 haloalkane dehalogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-10 Score=121.56 Aligned_cols=113 Identities=14% Similarity=0.134 Sum_probs=76.8
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++..... +..|.||++||.++.... |... ...|.+.+ .|+++|.||.|..... ...
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~--w~~~-~~~L~~~~-~via~D~~G~G~S~~~--------~~~ 73 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSSYL--WRNI-IPHLAGLG-RCLAPDLIGMGASDKP--------DID 73 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCHHH--HHHH-HHHHhhCC-EEEEEcCCCCCCCCCC--------CCC
Confidence 37777664432 234789999998766643 4333 34555545 9999999995543211 111
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
..+++..+.+..+++. ...+++.++|+|+||.++..++.++|++++++|...+
T Consensus 74 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 74 YTFADHARYLDAWFDA--LGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred CCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 2355555555555443 2336899999999999999999999999999998776
|
|
| >TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.6e-10 Score=121.63 Aligned_cols=211 Identities=17% Similarity=0.135 Sum_probs=121.5
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+.... + +...|.||++||..+.+. .|... ...|.+ +|.|+++|+||.|... ... ..
T Consensus 9 ~~~~~~~~~~~~--~---~~~~~plvllHG~~~~~~--~w~~~-~~~L~~-~~~vi~~Dl~G~G~S~---~~~-----~~ 71 (276)
T TIGR02240 9 LDGQSIRTAVRP--G---KEGLTPLLIFNGIGANLE--LVFPF-IEALDP-DLEVIAFDVPGVGGSS---TPR-----HP 71 (276)
T ss_pred cCCcEEEEEEec--C---CCCCCcEEEEeCCCcchH--HHHHH-HHHhcc-CceEEEECCCCCCCCC---CCC-----Cc
Confidence 367777665431 1 112367899999655554 34433 345654 8999999999955432 111 12
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhh-------h---cccc--ccc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML-------R---FNKF--TIA 681 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~-------~---~~~~--~~~ 681 (783)
..++++.+.++.+++. .+.+++.++|+|+||++++.++.++|++.+++|+..+..... . .... ...
T Consensus 72 ~~~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (276)
T TIGR02240 72 YRFPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQ 149 (276)
T ss_pred CcHHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhc
Confidence 3455655555555554 234689999999999999999999999999999887654211 0 0000 000
Q ss_pred c-----cchhhhCCC--CCHHHH-----------------HHHHh--cCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH
Q psy2521 682 Y-----YSESEFGSP--NNKTHF-----------------HNLLS--YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 735 (783)
Q Consensus 682 ~-----~~~~~~g~p--~~~~~~-----------------~~~~~--~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~ 735 (783)
. .....++.. .+++.. ..+.. ......++. +.+| +|+++|++|..+++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~v~~~ 224 (276)
T TIGR02240 150 PSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHK----IQQP-TLVLAGDDDPIIPLI 224 (276)
T ss_pred cccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhc----CCCC-EEEEEeCCCCcCCHH
Confidence 0 000001100 000000 00000 011111233 6777 999999999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 736 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 736 ~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
++.++.+.+... ++.++++ ||...-...+.+.+
T Consensus 225 ~~~~l~~~~~~~-----------~~~~i~~-gH~~~~e~p~~~~~ 257 (276)
T TIGR02240 225 NMRLLAWRIPNA-----------ELHIIDD-GHLFLITRAEAVAP 257 (276)
T ss_pred HHHHHHHhCCCC-----------EEEEEcC-CCchhhccHHHHHH
Confidence 888787665433 4556665 99876555444443
|
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid. |
| >PLN02824 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.7e-10 Score=122.67 Aligned_cols=109 Identities=13% Similarity=0.099 Sum_probs=74.1
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||..+.+.. |.... ..|.. .|.|+++|.||.|..... ............++|+...+..+++.-. .
T Consensus 29 ~~~vlllHG~~~~~~~--w~~~~-~~L~~-~~~vi~~DlpG~G~S~~~-~~~~~~~~~~~~~~~~a~~l~~~l~~l~--~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNADH--WRKNT-PVLAK-SHRVYAIDLLGYGYSDKP-NPRSAPPNSFYTFETWGEQLNDFCSDVV--G 101 (294)
T ss_pred CCeEEEECCCCCChhH--HHHHH-HHHHh-CCeEEEEcCCCCCCCCCC-ccccccccccCCHHHHHHHHHHHHHHhc--C
Confidence 4789999998776643 44444 33454 469999999995543210 0000000123456777776666665422 3
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+++.++|||+||.++..++.++|++++++|...|..
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 689999999999999999999999999999887643
|
|
| >PLN02965 Probable pheophorbidase | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.9e-10 Score=117.27 Aligned_cols=198 Identities=12% Similarity=0.152 Sum_probs=115.2
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC-C
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP-K 635 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~-~ 635 (783)
.||++||...... .|.... ..|++.||.|+++|+||.|... ... ....+++++.+.+..+++. .+. .
T Consensus 5 ~vvllHG~~~~~~--~w~~~~-~~L~~~~~~via~Dl~G~G~S~---~~~----~~~~~~~~~a~dl~~~l~~--l~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGAW--CWYKLA-TLLDAAGFKSTCVDLTGAGISL---TDS----NTVSSSDQYNRPLFALLSD--LPPDH 72 (255)
T ss_pred EEEEECCCCCCcC--cHHHHH-HHHhhCCceEEEecCCcCCCCC---CCc----cccCCHHHHHHHHHHHHHh--cCCCC
Confidence 4899999876543 354433 4564469999999999965432 111 1123466666655555554 222 4
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc---h-----hhhc-ccccccccch---------------------
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGAL---D-----MLRF-NKFTIAYYSE--------------------- 685 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~---d-----~~~~-~~~~~~~~~~--------------------- 685 (783)
++.++||||||.++..++.++|++++.+|...+.. + .... .. .....|.
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVME-GTEKIWDYTFGEGPDKPPTGIMMKPEFV 151 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhh-ccccceeeeeccCCCCCcchhhcCHHHH
Confidence 89999999999999999999999999888766541 1 0000 00 0000000
Q ss_pred -h-hhCCCCCHHHHHHHHhc---Cccc---C---CCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCC
Q psy2521 686 -S-EFGSPNNKTHFHNLLSY---SPLH---N---IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 686 -~-~~g~p~~~~~~~~~~~~---sp~~---~---v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 754 (783)
. .+... ..+........ .+.. . +......++.| +|+++|++|..+++..+..+++.+...
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~a------- 222 (255)
T PLN02965 152 RHYYYNQS-PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVP-RVYIKTAKDNLFDPVRQDVMVENWPPA------- 222 (255)
T ss_pred HHHHhcCC-CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCcc-------
Confidence 0 01110 11111111000 0110 0 00000026777 999999999999998887777665433
Q ss_pred CCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 755 KNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 755 ~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
.+.+++++||...-.....+.+
T Consensus 223 ----~~~~i~~~GH~~~~e~p~~v~~ 244 (255)
T PLN02965 223 ----QTYVLEDSDHSAFFSVPTTLFQ 244 (255)
T ss_pred ----eEEEecCCCCchhhcCHHHHHH
Confidence 6788899999986555554443
|
|
| >PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=126.27 Aligned_cols=125 Identities=12% Similarity=0.077 Sum_probs=82.2
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHH---cCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR---HFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
+.+..|.++++....|.+. ...|.||++||..+.... |.......+. +.||.|+++|+||.|.... .
T Consensus 180 ~~~~~~~~l~~~~~gp~~~---~~k~~VVLlHG~~~s~~~--W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~---p-- 249 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDN---KAKEDVLFIHGFISSSAF--WTETLFPNFSDAAKSTYRLFAVDLLGFGRSPK---P-- 249 (481)
T ss_pred eEeeCCeEEEEEEecCCCC---CCCCeEEEECCCCccHHH--HHHHHHHHHHHHhhCCCEEEEECCCCCCCCcC---C--
Confidence 3344556777776666541 234789999998766532 3322212222 3599999999999543321 1
Q ss_pred cccCCcChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 608 RLLKKQNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
......+++..+.+. .+++. ...+++.++|||+||+++..++.++|++++++|+..|.
T Consensus 250 --~~~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 --ADSLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred --CCCcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 112234666666653 45544 23468999999999999999999999999999988753
|
|
| >TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.6e-10 Score=118.38 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=71.8
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKYTKP 634 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~~~d~ 634 (783)
|+||++||..+.... |.. ....|+ +||.|+++|+||.|..... .......+++.... +..+++. .+.
T Consensus 2 ~~vv~~hG~~~~~~~--~~~-~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSGAD--WQA-LIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGI 69 (251)
T ss_pred CEEEEEcCCCCchhh--HHH-HHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCC
Confidence 789999997665543 333 334455 5999999999995543210 11122345555554 5555443 345
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+++.++|||+||.++..++.++|+.++++++..+..
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 789999999999999999999999999998877643
|
This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. |
| >KOG4667|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=7e-10 Score=105.14 Aligned_cols=222 Identities=14% Similarity=0.118 Sum_probs=147.2
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
...+.++.+.+.++-+.+. ..+..-++|..||.- +.-...+....+..+++.|+.++.+|++|-|+.-..++-
T Consensus 10 ~~~ivi~n~~ne~lvg~lh------~tgs~e~vvlcHGfr-S~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLH------ETGSTEIVVLCHGFR-SHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY 82 (269)
T ss_pred eeEEEeccCCCchhhccee------ccCCceEEEEeeccc-cccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc
Confidence 3445556555555544322 246778999999953 222333444567778888999999999998876655543
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc--
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY-- 683 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~-- 683 (783)
.+.....+|+..+++++..... ---+|.|||-||..+...+..+++ ..-+|.++|-.|..+....+.++.
T Consensus 83 ----Gn~~~eadDL~sV~q~~s~~nr---~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l 154 (269)
T KOG4667|consen 83 ----GNYNTEADDLHSVIQYFSNSNR---VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYL 154 (269)
T ss_pred ----CcccchHHHHHHHHHHhccCce---EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHH
Confidence 2233445999999999976322 234799999999999999998887 467788999888877653333332
Q ss_pred -chhhhC------------CCCCHHHHH-HHHh-cCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 684 -SESEFG------------SPNNKTHFH-NLLS-YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 684 -~~~~~g------------~p~~~~~~~-~~~~-~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
|..+-| .-..++-.. .+.. .++ ..++-+ ..|| +|-+||..|..||.+.+.+|++.+..+
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~-aclkId---~~C~-VLTvhGs~D~IVPve~AkefAk~i~nH- 228 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHE-ACLKID---KQCR-VLTVHGSEDEIVPVEDAKEFAKIIPNH- 228 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhh-hhcCcC---ccCc-eEEEeccCCceeechhHHHHHHhccCC-
Confidence 222212 111222111 1110 111 112222 5888 999999999999999999998877544
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCccchhhh
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~ 778 (783)
.|.+.+++.|++...+.+..
T Consensus 229 ----------~L~iIEgADHnyt~~q~~l~ 248 (269)
T KOG4667|consen 229 ----------KLEIIEGADHNYTGHQSQLV 248 (269)
T ss_pred ----------ceEEecCCCcCccchhhhHh
Confidence 68889999999987666554
|
|
| >PRK06489 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.9e-10 Score=122.03 Aligned_cols=140 Identities=15% Similarity=0.114 Sum_probs=80.6
Q ss_pred CCeEEEEEEEC---CCCcEEEEEEEEecCc-CCCCCccEEEEecCCCCCccCCcCcHHHHHHH-------HcCCEEEEEe
Q psy2521 523 LFQTKQVYFRS---KDGTRVPMYIIHRVGA-LRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-------RHFNGIYAIP 591 (783)
Q Consensus 523 ~~~~~~~~~~s---~dg~~v~~~~~~p~~~-~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l-------~~~G~~v~~~ 591 (783)
.+..+.+++.+ .+|.++.....-.... .-.+..|.||++||+.+....+. ...+...| ...+|.|+++
T Consensus 33 ~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~-~~~~~~~l~~~~~~l~~~~~~Via~ 111 (360)
T PRK06489 33 DWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFL-SPTFAGELFGPGQPLDASKYFIILP 111 (360)
T ss_pred ceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhc-cchhHHHhcCCCCcccccCCEEEEe
Confidence 34566666665 3455544433210000 00001588999999877654321 11222222 1258999999
Q ss_pred cCCCCCCCChhHHhhcc--ccCCcChHHHHHHHH-HHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 592 NIRGGGELGEDWHNAGR--LLKKQNCFDDFQAAA-EYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 592 ~~RG~g~~G~~~~~~g~--~~~~~~~~~D~~a~~-~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
|+||.|..- ..... .......++|+...+ ..+.++ .+-+++. |+|+|+||++++.++.++|++++++|+..
T Consensus 112 Dl~GhG~S~---~p~~~~~~~~~~~~~~~~a~~~~~~l~~~--lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~ 186 (360)
T PRK06489 112 DGIGHGKSS---KPSDGLRAAFPRYDYDDMVEAQYRLVTEG--LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMA 186 (360)
T ss_pred CCCCCCCCC---CCCcCCCCCCCcccHHHHHHHHHHHHHHh--cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeec
Confidence 999965321 11000 000124567776543 334443 2234664 89999999999999999999999998776
Q ss_pred C
Q psy2521 668 G 668 (783)
Q Consensus 668 ~ 668 (783)
+
T Consensus 187 s 187 (360)
T PRK06489 187 S 187 (360)
T ss_pred c
Confidence 5
|
|
| >PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.2e-10 Score=123.95 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=75.8
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+..|+||++||..+.... |.. ....|.+ +|.|+++|+||.|.... ......++++.+.+..+++. .
T Consensus 129 ~~~~~vl~~HG~~~~~~~--~~~-~~~~l~~-~~~v~~~d~~g~G~s~~--------~~~~~~~~~~~~~~~~~~~~--~ 194 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN--WLF-NHAALAA-GRPVIALDLPGHGASSK--------AVGAGSLDELAAAVLAFLDA--L 194 (371)
T ss_pred CCCCeEEEECCCCCccch--HHH-HHHHHhc-CCEEEEEcCCCCCCCCC--------CCCCCCHHHHHHHHHHHHHh--c
Confidence 345889999987655443 322 2345654 79999999999665431 11234577877777777654 5
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
++.++.++|||+||+++..++.++|+..+++|+..|.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 6678999999999999999999999989999888765
|
|
| >TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.5e-10 Score=120.83 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=81.0
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC---------cCcHHH---HHHHHcCCEEEEEecCCC--CCCCC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP---------TFSISR---CMFLRHFNGIYAIPNIRG--GGELG 600 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~---------~~~~~~---~~~l~~~G~~v~~~~~RG--~g~~G 600 (783)
+|.+|.+...-+.+ .+..|.||++||-.+..... .|...+ ..++. .+|.|+++|+|| +|.-+
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT-DRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC-CceEEEEecCCCCCCCCCC
Confidence 45555555443321 12357899999976644221 122211 13333 599999999999 44434
Q ss_pred h-hHHhhcccc---CCcChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 601 E-DWHNAGRLL---KKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 601 ~-~~~~~g~~~---~~~~~~~D~~a~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
. ++...+... .....++|+.+.+..+++.- .-++ +.++|+|+||.++..++.++|++++++|+..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 2 222222110 11345778887777666552 3356 999999999999999999999999988887654
|
This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes. |
| >KOG4178|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.9e-09 Score=110.46 Aligned_cols=105 Identities=14% Similarity=0.042 Sum_probs=74.6
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc-C
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-K 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-~ 630 (783)
.+..|+|++.||-+..+.++.+.. ..|+.+||.|+++|.|| ||.+-. ....-..+++-+..-+..|++. |
T Consensus 41 ~~~gP~illlHGfPe~wyswr~q~---~~la~~~~rviA~DlrG---yG~Sd~---P~~~~~Yt~~~l~~di~~lld~Lg 111 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWYSWRHQI---PGLASRGYRVIAPDLRG---YGFSDA---PPHISEYTIDELVGDIVALLDHLG 111 (322)
T ss_pred CCCCCEEEEEccCCccchhhhhhh---hhhhhcceEEEecCCCC---CCCCCC---CCCcceeeHHHHHHHHHHHHHHhc
Confidence 356799999999999988766553 34566799999999999 663211 1111222333333333333332 3
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
-+|+.+.||++|++++..++..+|++..+.|+...
T Consensus 112 ---~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 112 ---LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred ---cceeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 36999999999999999999999999988887643
|
|
| >PLN02894 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.3e-09 Score=120.56 Aligned_cols=107 Identities=15% Similarity=0.046 Sum_probs=68.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHH-HHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAA-EYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~-~~l~~~~~ 631 (783)
+..|+||++||..+... .|.... ..|.+ +|.|+.+|+||.|...+. ...........+.+++.+ +|+...
T Consensus 103 ~~~p~vvllHG~~~~~~--~~~~~~-~~L~~-~~~vi~~D~rG~G~S~~~---~~~~~~~~~~~~~~~~~i~~~~~~l-- 173 (402)
T PLN02894 103 EDAPTLVMVHGYGASQG--FFFRNF-DALAS-RFRVIAIDQLGWGGSSRP---DFTCKSTEETEAWFIDSFEEWRKAK-- 173 (402)
T ss_pred CCCCEEEEECCCCcchh--HHHHHH-HHHHh-CCEEEEECCCCCCCCCCC---CcccccHHHHHHHHHHHHHHHHHHc--
Confidence 45689999999765432 233333 44554 799999999996543311 000000001112233333 333332
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+.+++.++|||+||++++.++.++|+.++++|...|.
T Consensus 174 -~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 174 -NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 4458999999999999999999999999998887653
|
|
| >PLN02679 hydrolase, alpha/beta fold family protein | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.1e-10 Score=121.77 Aligned_cols=102 Identities=14% Similarity=0.091 Sum_probs=67.6
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||..+... .|...+ ..|.+ +|.|+.+|+||.|... ... .....++++...+..+++. ...
T Consensus 88 gp~lvllHG~~~~~~--~w~~~~-~~L~~-~~~via~Dl~G~G~S~---~~~----~~~~~~~~~a~~l~~~l~~--l~~ 154 (360)
T PLN02679 88 GPPVLLVHGFGASIP--HWRRNI-GVLAK-NYTVYAIDLLGFGASD---KPP----GFSYTMETWAELILDFLEE--VVQ 154 (360)
T ss_pred CCeEEEECCCCCCHH--HHHHHH-HHHhc-CCEEEEECCCCCCCCC---CCC----CccccHHHHHHHHHHHHHH--hcC
Confidence 378999999866543 344433 45664 8999999999954322 110 0122345555544444443 233
Q ss_pred CcEEEEEeChhHHHHHHHHh-cCCCceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGACLN-QRPELYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~-~~p~lf~a~i~~~~~ 669 (783)
+++.++|+|+||+++..++. .+|++++++|...+.
T Consensus 155 ~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 155 KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 68999999999999887776 479999999877653
|
|
| >PRK10439 enterobactin/ferric enterobactin esterase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=3.6e-09 Score=116.33 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=126.2
Q ss_pred EEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCC----EEEEEecCCCCCCCC
Q psy2521 526 TKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN----GIYAIPNIRGGGELG 600 (783)
Q Consensus 526 ~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~RG~g~~G 600 (783)
.+.+++.|. -|.+..++++.|++.. .+++|+|++.||.........+ ..+..+++ .| .+++.+|.-.+....
T Consensus 180 ~~~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~-~~ld~li~-~g~i~P~ivV~id~~~~~~R~ 256 (411)
T PRK10439 180 AKEIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVW-PALDSLTH-RGQLPPAVYLLIDAIDTTHRS 256 (411)
T ss_pred eEEEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHH-HHHHHHHH-cCCCCceEEEEECCCCccccc
Confidence 455555553 5677889999998875 5689999999997644332221 12334444 46 446677653221111
Q ss_pred hhHHhhccccCCcChHHHHH--HHHHHHHHc--CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQ--AAAEYMINK--KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~--a~~~~l~~~--~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~ 676 (783)
.+ ......|.+++ ..+-++.++ -..|+++.+|.|.||||+.++.++.++|++|.++++.+|-+-+..
T Consensus 257 ~e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-- 327 (411)
T PRK10439 257 QE-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-- 327 (411)
T ss_pred cc-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC--
Confidence 11 01112344433 233444443 236889999999999999999999999999999999998542110
Q ss_pred cccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC
Q psy2521 677 KFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 756 (783)
Q Consensus 677 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 756 (783)
..+ .......+.+.+. .... ... .++|.+|..|... +....++++.|+++ |.
T Consensus 328 ----------~~~-~~~~~l~~~l~~~----~~~~----~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~-------G~ 379 (411)
T PRK10439 328 ----------RGG-QQEGVLLEQLKAG----EVSA----RGL-RIVLEAGRREPMI-MRANQALYAQLHPA-------GH 379 (411)
T ss_pred ----------ccC-CchhHHHHHHHhc----ccCC----CCc-eEEEeCCCCCchH-HHHHHHHHHHHHHC-------CC
Confidence 000 0111111222221 0000 011 3899999988644 56788999999998 88
Q ss_pred cEEEEEeCCCCccCC
Q psy2521 757 PLLLRVEQDAGHGQG 771 (783)
Q Consensus 757 ~~~l~~~~~~gHg~~ 771 (783)
++.++++++ ||...
T Consensus 380 ~~~~~~~~G-GHd~~ 393 (411)
T PRK10439 380 SVFWRQVDG-GHDAL 393 (411)
T ss_pred cEEEEECCC-CcCHH
Confidence 999999987 79753
|
|
| >PRK10349 carboxylesterase BioH; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.6e-10 Score=114.72 Aligned_cols=190 Identities=14% Similarity=0.059 Sum_probs=110.2
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 635 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 635 (783)
|.||++||..+.+. .|.. ....|.+ .|.|+++|+||.|... . .....++++.. .+++. ..+
T Consensus 14 ~~ivllHG~~~~~~--~w~~-~~~~L~~-~~~vi~~Dl~G~G~S~------~---~~~~~~~~~~~---~l~~~---~~~ 74 (256)
T PRK10349 14 VHLVLLHGWGLNAE--VWRC-IDEELSS-HFTLHLVDLPGFGRSR------G---FGALSLADMAE---AVLQQ---APD 74 (256)
T ss_pred CeEEEECCCCCChh--HHHH-HHHHHhc-CCEEEEecCCCCCCCC------C---CCCCCHHHHHH---HHHhc---CCC
Confidence 56999999655543 3544 3355664 7999999999955321 0 11123444443 44443 246
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc---------------cc-----ccccchh--hhCCCCC
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK---------------FT-----IAYYSES--EFGSPNN 693 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~---------------~~-----~~~~~~~--~~g~p~~ 693 (783)
++.++|||+||.++..++.++|++++.+|...+..-...... .. ....|.. .++.+..
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETA 154 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchH
Confidence 899999999999999999999999999987655211100000 00 0000000 0111110
Q ss_pred HHHH----------------------HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCC
Q psy2521 694 KTHF----------------------HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 751 (783)
Q Consensus 694 ~~~~----------------------~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 751 (783)
.... +.+...+....++. +.+| +||++|++|..++...+..+.+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~i~~----- 224 (256)
T PRK10349 155 RQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQN----VSMP-FLRLYGYLDGLVPRKVVPMLDKLWPH----- 224 (256)
T ss_pred HHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhh----cCCC-eEEEecCCCccCCHHHHHHHHHhCCC-----
Confidence 0000 01111111112222 6777 99999999999988776655554433
Q ss_pred CCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 752 PYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
.++.+++++||...-...+.+.+
T Consensus 225 ------~~~~~i~~~gH~~~~e~p~~f~~ 247 (256)
T PRK10349 225 ------SESYIFAKAAHAPFISHPAEFCH 247 (256)
T ss_pred ------CeEEEeCCCCCCccccCHHHHHH
Confidence 37888999999976655555443
|
|
| >COG2272 PnbA Carboxylesterase type B [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.3e-10 Score=121.57 Aligned_cols=217 Identities=20% Similarity=0.203 Sum_probs=137.1
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCC---CCCccCCcCcHHHHHHHHcCC-EEEEEecCCCCCCCCh-hHHhhc--cccC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGG---YGVSVLPTFSISRCMFLRHFN-GIYAIPNIRGGGELGE-DWHNAG--RLLK 611 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg---~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~RG~g~~G~-~~~~~g--~~~~ 611 (783)
+..-|+.|. ...++.|++||+||| .|....+.|.++ .|+++| ++|+.+|||-|- +|- ++.... ....
T Consensus 80 L~LNIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs---~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~~~~~~ 153 (491)
T COG2272 80 LYLNIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGS---ALAARGDVVVVSVNYRLGA-LGFLDLSSLDTEDAFA 153 (491)
T ss_pred eeEEeeccC--CCCCCCcEEEEEeccccccCCCcccccChH---HHHhcCCEEEEEeCccccc-ceeeehhhcccccccc
Confidence 455666777 235678999999998 355556667764 355567 999999999743 341 222221 1111
Q ss_pred CcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCcchhhhcccc--ccccc
Q psy2521 612 KQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALDMLRFNKF--TIAYY 683 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~~d~~~~~~~--~~~~~ 683 (783)
....+.|++.|++|+.++ --.||++|.|+|.|+|++.++.++.. |. +|+.+|+.+|-.-+...... ..+..
T Consensus 154 ~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~~~~s~~~A~~~a~~ 232 (491)
T COG2272 154 SNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAASRVTSREEAREKAAA 232 (491)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCCccCcHHHHHHHHHH
Confidence 124689999999999775 34699999999999999999998875 76 89999998887653221110 01122
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCC-CcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN-TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~-~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
+....|.+ .+..+.|++.++-.-++...-. ...+-+....-..|+.+-|.+..++.+.-+.. ++|+.+-+
T Consensus 233 f~~~lG~~--~~~~~~L~~~~~~~L~~~~~~~~~~~~~~~~~~p~~~d~~lp~~P~e~~~~g~~~-------~vpl~iGt 303 (491)
T COG2272 233 FARALGIP--EATLDKLRALSAEDLVKARLPLIGRTFGAVPYGPVLGDSLLPRDPLEAIAQGRSH-------GVPLMIGT 303 (491)
T ss_pred HHHHhCCC--HHHHHHHhcCCHHHHHhhhhhhccccCCCcCCCCccCcccccCChhhhhhccccc-------CCcEEeec
Confidence 33456877 4455667766654322210000 00000111122345556677788888877766 88888888
Q ss_pred eCCCCccCC
Q psy2521 763 EQDAGHGQG 771 (783)
Q Consensus 763 ~~~~gHg~~ 771 (783)
..++|-.|.
T Consensus 304 n~dEg~~f~ 312 (491)
T COG2272 304 NHDEGSLFI 312 (491)
T ss_pred cCCcceEEe
Confidence 888877664
|
|
| >KOG1838|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.8e-09 Score=110.08 Aligned_cols=217 Identities=16% Similarity=0.127 Sum_probs=140.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcC---CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC-
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG- 600 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~---~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G- 600 (783)
.-++..++.+||-.+-.-.+.+.+-. .++..|+||++||-.+.+.. .|-..+...+.++||.+++.|.||-++--
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~-~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHE-SYVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChh-HHHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 44556667788888887777555431 13577999999999888876 45444545556789999999999933221
Q ss_pred --hhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCcchh--h
Q psy2521 601 --EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALDM--L 673 (783)
Q Consensus 601 --~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~~d~--~ 673 (783)
+..+.+ ..-+|+.++++++.++.- ..++.++|.|+||.+....+.+.-+ +-+|++..+|+--. -
T Consensus 171 tTpr~f~a-------g~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~ 241 (409)
T KOG1838|consen 171 TTPRLFTA-------GWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAAS 241 (409)
T ss_pred CCCceeec-------CCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhh
Confidence 111222 224799999999988632 2379999999999999999876533 77777777774311 0
Q ss_pred hccc-----------cc----------------ccccc--------h---------hhhCCCCCHHHHHHHHhcCcccCC
Q psy2521 674 RFNK-----------FT----------------IAYYS--------E---------SEFGSPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 674 ~~~~-----------~~----------------~~~~~--------~---------~~~g~p~~~~~~~~~~~~sp~~~v 709 (783)
+... ++ ....| . ..||-+.. -+++++.|+...+
T Consensus 242 ~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~---deYY~~aSs~~~v 318 (409)
T KOG1838|consen 242 RSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSV---DEYYKKASSSNYV 318 (409)
T ss_pred hHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcH---HHHHhhcchhhhc
Confidence 0000 00 00000 0 12243332 2457888999888
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
+. ++.| +|++++.+|+.||+. +.-.- ..++ +..+.+.+-..+||-
T Consensus 319 ~~----I~VP-~L~ina~DDPv~p~~-~ip~~-~~~~--------np~v~l~~T~~GGHl 363 (409)
T KOG1838|consen 319 DK----IKVP-LLCINAADDPVVPEE-AIPID-DIKS--------NPNVLLVITSHGGHL 363 (409)
T ss_pred cc----cccc-EEEEecCCCCCCCcc-cCCHH-HHhc--------CCcEEEEEeCCCcee
Confidence 87 8888 999999999999874 22221 1121 335666666778885
|
|
| >PLN02578 hydrolase | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-09 Score=118.87 Aligned_cols=100 Identities=14% Similarity=0.049 Sum_probs=65.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||..+.... |... ...|++ +|.|+++|+||.|........ .......+|+.+.++.+. .
T Consensus 86 g~~vvliHG~~~~~~~--w~~~-~~~l~~-~~~v~~~D~~G~G~S~~~~~~----~~~~~~a~~l~~~i~~~~------~ 151 (354)
T PLN02578 86 GLPIVLIHGFGASAFH--WRYN-IPELAK-KYKVYALDLLGFGWSDKALIE----YDAMVWRDQVADFVKEVV------K 151 (354)
T ss_pred CCeEEEECCCCCCHHH--HHHH-HHHHhc-CCEEEEECCCCCCCCCCcccc----cCHHHHHHHHHHHHHHhc------c
Confidence 3668999997664432 3332 345664 899999999996654422110 000001134444444332 3
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++.++|||+||+++..++.++|++++++|...+
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 5799999999999999999999999999987654
|
|
| >PRK00175 metX homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-09 Score=120.21 Aligned_cols=113 Identities=17% Similarity=0.165 Sum_probs=73.9
Q ss_pred CccEEEEecCCCCCccCCc-----------CcHHH---HHHHHcCCEEEEEecCCCC--CCCChhHHhh--ccc---cCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPT-----------FSISR---CMFLRHFNGIYAIPNIRGG--GELGEDWHNA--GRL---LKK 612 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~-----------~~~~~---~~~l~~~G~~v~~~~~RG~--g~~G~~~~~~--g~~---~~~ 612 (783)
..|.||++||..+...... |...+ ..++. .+|.|+++|++|+ +..+...... +.. ...
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~ 125 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFP 125 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCC
Confidence 3689999999877664211 22211 12334 5999999999983 2223221100 000 011
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...++|+.+.+..+++.- ..++ +.++|+|+||.++..++.++|++++++|+..+.
T Consensus 126 ~~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 181 (379)
T PRK00175 126 VITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASS 181 (379)
T ss_pred cCCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCC
Confidence 346788888777777652 3346 489999999999999999999999999887653
|
|
| >cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.3e-10 Score=128.03 Aligned_cols=222 Identities=18% Similarity=0.096 Sum_probs=129.5
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCC-EEEEEecCC-CCCCCChhHHhhccccCCcCh
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN-GIYAIPNIR-GGGELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G-~~v~~~~~R-G~g~~G~~~~~~g~~~~~~~~ 615 (783)
-+...++.|.......+.|+||++|||.......... ....+..+.+ ++|+.+||| |..+|...... ...+...
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g 153 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYG 153 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchh
Confidence 3566777787543456789999999995444333322 1223444434 999999999 55555422111 1223345
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcchhhhcccccc---cccchhh
Q psy2521 616 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALDMLRFNKFTI---AYYSESE 687 (783)
Q Consensus 616 ~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~d~~~~~~~~~---~~~~~~~ 687 (783)
+.|+++|++|+.++ --.||+||.|+|+|+||.++..++.. .+.+|+++|+.+|............ .......
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~~ 233 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALSPWAIQENARGRAKRLARL 233 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccCcccccccHHHHHHHHHHH
Confidence 88999999999775 23799999999999999999998876 2458999999988665432111000 1112234
Q ss_pred hCCCC--CHHHHHHHHhcCcccCCCCCCCCCc---CCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 688 FGSPN--NKTHFHNLLSYSPLHNIKVPPNNTQ---YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 688 ~g~p~--~~~~~~~~~~~sp~~~v~~~~~~~~---~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
.|... ..+..+.|++.++..-++... ... .+..+...-.-|..+.+.+..++.++=+.. ++|+++=.
T Consensus 234 lgc~~~~~~~~l~cLr~~~~~~l~~a~~-~~~~~~~~~~~~f~PvvDg~~lp~~p~~~~~~g~~~-------~vPvLiG~ 305 (493)
T cd00312 234 LGCNDTSSAELLDCLRSKSAEELLDATR-KLLLFSYSPFLPFGPVVDGDFIPDDPEELIKEGKFA-------KVPLIIGV 305 (493)
T ss_pred cCCCCCCHHHHHHHHhcCCHHHHHHHHH-hhccccccCccceeeecCCCCCCcCHHHHHhcCCCC-------CCCEEEEE
Confidence 46543 233456666665432111100 000 000111222345555566665444332222 67888888
Q ss_pred eCCCCccCC
Q psy2521 763 EQDAGHGQG 771 (783)
Q Consensus 763 ~~~~gHg~~ 771 (783)
..++|..+.
T Consensus 306 t~dEg~~f~ 314 (493)
T cd00312 306 TKDEGGYFA 314 (493)
T ss_pred eccchhhhH
Confidence 888887653
|
) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.9e-08 Score=102.50 Aligned_cols=250 Identities=14% Similarity=0.102 Sum_probs=119.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
...-+|.+||++|.|..+..|. .++|++||++++.+++|-... ...+..+||+++.|+|...
T Consensus 38 F~~~~ft~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~--------------- 100 (386)
T PF14583_consen 38 FYQNCFTDDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKN--------------- 100 (386)
T ss_dssp TTS--B-TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEET---------------
T ss_pred ecCCCcCCCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEEC---------------
Confidence 4457899999999999998776 789999999999998886432 2236779999999999872
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE--ecCCcEEEEEE--------------------------------
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV--TDCGRYLLVST-------------------------------- 335 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~--SpDGk~l~~~~-------------------------------- 335 (783)
...|+..+|.|. +..+||+.|++ |.....| ..|++.++...
T Consensus 101 -~~~l~~vdL~T~--e~~~vy~~p~~--~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl 175 (386)
T PF14583_consen 101 -GRSLRRVDLDTL--EERVVYEVPDD--WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDL 175 (386)
T ss_dssp -TTEEEEEETTT----EEEEEE--TT--EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEET
T ss_pred -CCeEEEEECCcC--cEEEEEECCcc--cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEEC
Confidence 125666676664 23456666542 3222233 34455554332
Q ss_pred -------------------------------ecCCCC---cEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeC
Q psy2521 336 -------------------------------SNNTQG---SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNG 381 (783)
Q Consensus 336 -------------------------------~~~~~~---~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg 381 (783)
.++.-. .+||+++.++.. ..+..+...+...+.++|++||
T Consensus 176 ~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~------~~~v~~~~~~e~~gHEfw~~DG 249 (386)
T PF14583_consen 176 KTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSN------VKKVHRRMEGESVGHEFWVPDG 249 (386)
T ss_dssp TT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---------EESS---TTEEEEEEEE-TTS
T ss_pred CCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCc------ceeeecCCCCcccccccccCCC
Confidence 221111 245555544410 0011111122223456899999
Q ss_pred CEEEEEEC-CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC--------------CeeEEE
Q psy2521 382 PELIVKTT-KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN--------------VRSVMD 446 (783)
Q Consensus 382 ~~l~~~t~-~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~--------------g~~~l~ 446 (783)
..|+|.+- .++...-|+.+++++++. +.+.+.+.. .-.....+ +.|++--..+ ..+.|+
T Consensus 250 ~~i~y~~~~~~~~~~~i~~~d~~t~~~----~~~~~~p~~-~H~~ss~D-g~L~vGDG~d~p~~v~~~~~~~~~~~p~i~ 323 (386)
T PF14583_consen 250 STIWYDSYTPGGQDFWIAGYDPDTGER----RRLMEMPWC-SHFMSSPD-GKLFVGDGGDAPVDVADAGGYKIENDPWIY 323 (386)
T ss_dssp S-EEEEEEETTT--EEEEEE-TTT--E----EEEEEE-SE-EEEEE-TT-SSEEEEEE-------------------EEE
T ss_pred CEEEEEeecCCCCceEEEeeCCCCCCc----eEEEeCCce-eeeEEcCC-CCEEEecCCCCCccccccccceecCCcEEE
Confidence 99999765 444456799999988652 222332221 22222233 4444322211 124678
Q ss_pred EEECCCCceeeeecCCC---------e--EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDL---------G--QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~---------g--~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++++.++. +.|.... . .--.++.+||++.++|.. ++.-++.||.+++
T Consensus 324 ~~~~~~~~~-~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~S-d~~G~~~vY~v~i 382 (386)
T PF14583_consen 324 LFDVEAGRF-RKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRS-DMEGPPAVYLVEI 382 (386)
T ss_dssp EEETTTTEE-EEEEE-------BTTBSSTT----EE-TTSSEEEEEE--TTSS-EEEEEE-
T ss_pred EeccccCce-eeeeeccCcceeecCCCccCCCCCccCCCCCEEEEEC-CCCCCccEEEEeC
Confidence 888865553 2221110 0 012356679998888754 5566788999887
|
|
| >KOG4627|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=6e-10 Score=104.64 Aligned_cols=181 Identities=14% Similarity=0.133 Sum_probs=124.7
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
...|++|++||||....+..-.-....-+.++||.|+.++|--..+ ...-...+.|+...++|+.+. +-
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~-~~ 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKY-TE 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHh-cc
Confidence 4679999999999876654433333333446799999998764321 112234578999999998875 34
Q ss_pred CCCcEEEEEeChhHHHHHHHHhc-CCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcc-cCCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPL-HNIK 710 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~-~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~-~~v~ 710 (783)
+.++|.+.|||+|+.|++.++++ +.-+..+++..+|+.|+......+.+ .+.|.-.+. ....|+- ...+
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g----~dlgLt~~~-----ae~~Scdl~~~~ 204 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG----NDLGLTERN-----AESVSCDLWEYT 204 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc----cccCcccch-----hhhcCccHHHhc
Confidence 45679999999999999888764 32266788889999998775543322 122322211 1233332 1222
Q ss_pred CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 711 ~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
. ++.| +||+.+.+|.--.++|.+.|++.++++ .+..+++.+|.
T Consensus 205 ~----v~~~-ilVv~~~~espklieQnrdf~~q~~~a-----------~~~~f~n~~hy 247 (270)
T KOG4627|consen 205 D----VTVW-ILVVAAEHESPKLIEQNRDFADQLRKA-----------SFTLFKNYDHY 247 (270)
T ss_pred C----ceee-eeEeeecccCcHHHHhhhhHHHHhhhc-----------ceeecCCcchh
Confidence 2 4555 999999999988899999999999876 57778898885
|
|
| >TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.4e-09 Score=115.64 Aligned_cols=108 Identities=12% Similarity=0.053 Sum_probs=72.3
Q ss_pred EEEEecCCCCCccCCc--CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 557 VIIYGYGGYGVSVLPT--FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~--~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.||++||-........ -.......|.++||.|+++|+||.|.... .........+|+.+++++++++. ..
T Consensus 64 pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~~--~~ 135 (350)
T TIGR01836 64 PLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR------YLTLDDYINGYIDKCVDYICRTS--KL 135 (350)
T ss_pred cEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh------cCCHHHHHHHHHHHHHHHHHHHh--CC
Confidence 3777887422211110 01234556666799999999998542110 00000111245778899998763 34
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 672 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~ 672 (783)
+++.++|||+||.+++.++..+|+.++++|+.++.+|+
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 68999999999999999999999999999998887775
|
This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. |
| >PLN02211 methyl indole-3-acetate methyltransferase | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.2e-09 Score=110.47 Aligned_cols=107 Identities=16% Similarity=0.220 Sum_probs=74.2
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
.+..|.||++||..+... .|... ...|++.||.|+++|+||.|... .. ......++|+...+..+++.-
T Consensus 15 ~~~~p~vvliHG~~~~~~--~w~~~-~~~L~~~g~~vi~~dl~g~G~s~---~~----~~~~~~~~~~~~~l~~~i~~l- 83 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSW--CWYKI-RCLMENSGYKVTCIDLKSAGIDQ---SD----ADSVTTFDEYNKPLIDFLSSL- 83 (273)
T ss_pred cCCCCeEEEECCCCCCcC--cHHHH-HHHHHhCCCEEEEecccCCCCCC---CC----cccCCCHHHHHHHHHHHHHhc-
Confidence 456789999999766543 34433 35566569999999999955321 00 111245666666555554431
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...+++.++||||||+++..++.++|++++++|...+.
T Consensus 84 ~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 84 PENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 12368999999999999999999999999998887653
|
|
| >PRK07581 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-09 Score=119.11 Aligned_cols=113 Identities=17% Similarity=0.158 Sum_probs=64.4
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc---cC-CcChHHHHHHHHHHHHHc
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL---LK-KQNCFDDFQAAAEYMINK 629 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~---~~-~~~~~~D~~a~~~~l~~~ 629 (783)
+.|+||+.||..+....+.+.......|...+|.|+++|+||.|.........+.. .. .....+|+.+....|.+.
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 44667776665544332222100001343358999999999955432111000000 00 001124544444445542
Q ss_pred CCCCCCcE-EEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 630 KYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 630 ~~~d~~ri-~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
...+++ .|+|+|+||+++..++.++|++++++|..++
T Consensus 120 --lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 120 --FGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred --hCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 123574 7899999999999999999999999887744
|
|
| >PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-10 Score=120.48 Aligned_cols=137 Identities=18% Similarity=0.194 Sum_probs=91.1
Q ss_pred CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCC----EEEEEecCCCCCCCChhHHhh-----
Q psy2521 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN----GIYAIPNIRGGGELGEDWHNA----- 606 (783)
Q Consensus 536 g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G----~~v~~~~~RG~g~~G~~~~~~----- 606 (783)
|..+.++++.|+++...++.|+|++.||..+.............++++ | .++++++.-+.+.....|+..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~-~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~ 83 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAE-GKIPPMIIVVIPNGDNSRFYTSWYLPAGSSR 83 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHH-HTSEEEEEEEEESSSTSSTTSBTTSSBCTTC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHh-CCCCceEEEEEeccccccccccccccccccc
Confidence 677899999999987788999999999951111101111112233443 4 455555554433233344421
Q ss_pred -ccccCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhh
Q psy2521 607 -GRLLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML 673 (783)
Q Consensus 607 -g~~~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~ 673 (783)
.....+...+.+++ +.+.++.++-.+++.+.+|+|+|+||+.++.++.++|++|.++++.+|.++..
T Consensus 84 ~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 84 RADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp BCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred ccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 11122334466665 35777777766777679999999999999999999999999999999988764
|
; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D .... |
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.4e-08 Score=102.74 Aligned_cols=230 Identities=16% Similarity=0.147 Sum_probs=140.7
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
...+..+.||||.++|.-.- .+ -.++++|+.||+....-.. +...++.+|.|||.+|+-.+.
T Consensus 269 ~~~V~yi~wSPDdryLlaCg----~~-e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~----------- 332 (519)
T KOG0293|consen 269 SQPVSYIMWSPDDRYLLACG----FD-EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSP----------- 332 (519)
T ss_pred cCceEEEEECCCCCeEEecC----ch-HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCC-----------
Confidence 35688899999999986442 22 2399999999986543222 234478999999999765441
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
.+.++.++++.... --++....+. ...++.|+||++++.... ..+|.+++..+... +.
T Consensus 333 -----dr~i~~wdlDgn~~---~~W~gvr~~~-v~dlait~Dgk~vl~v~~----d~~i~l~~~e~~~d---------r~ 390 (519)
T KOG0293|consen 333 -----DRTIIMWDLDGNIL---GNWEGVRDPK-VHDLAITYDGKYVLLVTV----DKKIRLYNREARVD---------RG 390 (519)
T ss_pred -----CCcEEEecCCcchh---hcccccccce-eEEEEEcCCCcEEEEEec----ccceeeechhhhhh---------hc
Confidence 13566777664321 1122222232 357889999999987652 26788888766210 11
Q ss_pred eecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCee
Q psy2521 366 VIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 366 l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
++.....-.. .+|.||+.++ .|. ....+..+|++... ..+....+.. .-.+.+.+-..++.++++..+| +
T Consensus 391 lise~~~its~~iS~d~k~~L--vnL--~~qei~LWDl~e~~--lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED--~ 462 (519)
T KOG0293|consen 391 LISEEQPITSFSISKDGKLAL--VNL--QDQEIHLWDLEENK--LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSED--S 462 (519)
T ss_pred cccccCceeEEEEcCCCcEEE--EEc--ccCeeEEeecchhh--HHHHhhcccccceEEEeccCCCCcceEEecCCC--c
Confidence 2222222222 3677766444 333 23458888886422 1111111211 2223332222223677777777 5
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEe
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~s 483 (783)
+||+|+..+|+.+..++....+|..++++|...+++.+.+
T Consensus 463 kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASas 502 (519)
T KOG0293|consen 463 KVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASAS 502 (519)
T ss_pred eEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccC
Confidence 8999999999998888887888888999998887775443
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.2e-06 Score=92.90 Aligned_cols=240 Identities=12% Similarity=0.104 Sum_probs=136.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
...+.|||||+.++.+... ...|+++|+.+++.+...........+.|+|||+.++.+...
T Consensus 33 ~~~l~~~~dg~~l~~~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~--------------- 93 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASD----SDTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANED--------------- 93 (300)
T ss_pred CCceEECCCCCEEEEEECC----CCeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---------------
Confidence 3458899999987555432 246999999998765422222223578899999977665421
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...|+++++.+.. .+..+.... ...++.++|||+++++.... .+.++++|..++. . ...+..+.
T Consensus 94 ~~~l~~~d~~~~~--~~~~~~~~~---~~~~~~~~~dg~~l~~~~~~---~~~~~~~d~~~~~--~------~~~~~~~~ 157 (300)
T TIGR03866 94 DNLVTVIDIETRK--VLAEIPVGV---EPEGMAVSPDGKIVVNTSET---TNMAHFIDTKTYE--I------VDNVLVDQ 157 (300)
T ss_pred CCeEEEEECCCCe--EEeEeeCCC---CcceEEECCCCCEEEEEecC---CCeEEEEeCCCCe--E------EEEEEcCC
Confidence 2368888886532 122222111 12468899999998876432 2456677876631 0 11111111
Q ss_pred cceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-----C-ceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 371 DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----N-RTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 371 ~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-----~-~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
......|+++|+.|++.+.. ...|..+|+.+++. ...+..... . .........+++.+++....+ ..
T Consensus 158 ~~~~~~~s~dg~~l~~~~~~---~~~v~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~--~~ 230 (300)
T TIGR03866 158 RPRFAEFTADGKELWVSSEI---GGTVSVIDVATRKV--IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA--NR 230 (300)
T ss_pred CccEEEECCCCCEEEEEcCC---CCEEEEEEcCccee--eeeeeecccccccccCCccceEECCCCCEEEEEcCCC--Ce
Confidence 12223589999988775433 24588889876541 122211100 0 111122334545555544333 46
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+||+.+++.+..+... +.+..+++++++..++... ..-.++..+|+
T Consensus 231 i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~---~~~~~i~v~d~ 278 (300)
T TIGR03866 231 VAVVDAKTYEVLDYLLVG-QRVWQLAFTPDEKYLLTTN---GVSNDVSVIDV 278 (300)
T ss_pred EEEEECCCCcEEEEEEeC-CCcceEEECCCCCEEEEEc---CCCCeEEEEEC
Confidence 899999877765544322 2344667788888776432 12246999998
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.3e-09 Score=110.72 Aligned_cols=176 Identities=17% Similarity=0.096 Sum_probs=111.4
Q ss_pred HHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH-cCCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 577 RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN-KKYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 577 ~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~-~~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
+..||+ +||+|+++||-|- |..|.. ........-|.+.|++.+.. .+.....+++++|+|.||.-+++++..
T Consensus 19 l~~~L~-~GyaVv~pDY~Gl---g~~y~~---~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 19 LAAWLA-RGYAVVAPDYEGL---GTPYLN---GRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHH-CCCEEEecCCCCC---CCcccC---cHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 456676 6999999999993 323211 11112335566666666654 354445799999999999999888754
Q ss_pred ----CCCc---eeEEEEcCCcchhhhcccccccccc---------------------hhhhCCCC---------------
Q psy2521 656 ----RPEL---YGAALILVGALDMLRFNKFTIAYYS---------------------ESEFGSPN--------------- 692 (783)
Q Consensus 656 ----~p~l---f~a~i~~~~~~d~~~~~~~~~~~~~---------------------~~~~g~p~--------------- 692 (783)
.||+ +.++++..|..|+..+.....+..+ ..++-+|.
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 4776 6888888898887655321111000 00000000
Q ss_pred --------------------------CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHh
Q psy2521 693 --------------------------NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 746 (783)
Q Consensus 693 --------------------------~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~ 746 (783)
++...+.+...+. ..-... ....| ++|.||..|..||+....++++++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-~~~~~~--~P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~ 247 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSL-GMGGDW--TPTVP-VLIYQGTADEVVPPADTDALVAKWCA 247 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhc-cccCCC--CCCCC-EEEEecCCCCCCChHHHHHHHHHHHH
Confidence 0011111222211 000110 12556 99999999999999999999999999
Q ss_pred hhCCCCCCC-CcEEEEEeCCCCccC
Q psy2521 747 KIGSLPYQK-NPLLLRVEQDAGHGQ 770 (783)
Q Consensus 747 ~~~~~~~~~-~~~~l~~~~~~gHg~ 770 (783)
. | .+++++.++..+|..
T Consensus 248 ~-------G~a~V~~~~~~~~~H~~ 265 (290)
T PF03583_consen 248 A-------GGADVEYVRYPGGGHLG 265 (290)
T ss_pred c-------CCCCEEEEecCCCChhh
Confidence 8 8 799999999999974
|
Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process |
| >PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.7e-09 Score=108.63 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc---ccc--ccccch------
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN---KFT--IAYYSE------ 685 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~---~~~--~~~~~~------ 685 (783)
+=|..|++||.++..++++||+|+|.|.||-+++.++...| .++|+|+.+|-.-+.... ... ..+.+.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF 82 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc
Confidence 45788999999999999999999999999999999999999 679999988843222110 000 000000
Q ss_pred --hhhCCCCCHHHHHH------HHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH-HHHHHHHHhhhCCCCCCCC
Q psy2521 686 --SEFGSPNNKTHFHN------LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQEKIGSLPYQKN 756 (783)
Q Consensus 686 --~~~g~p~~~~~~~~------~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~~~~~~ 756 (783)
..-+.......+.. -.+.-|+.+ +++| +|+++|+.|...|-... ..+.++|+++ +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~-------i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~-------~~ 147 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEK-------IKGP-ILLISGEDDQIWPSSEMAEQIEERLKAA-------GF 147 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG---------SE-EEEEEETT-SSS-HHHHHHHHHHHHHCT-------T-
T ss_pred eecCCcceehhhhhhcccccccccccccHHH-------cCCC-EEEEEeCCCCccchHHHHHHHHHHHHHh-------CC
Confidence 00000000000000 011123344 4555 99999999999887654 4566678877 54
Q ss_pred c--EEEEEeCCCCccCCcc
Q psy2521 757 P--LLLRVEQDAGHGQGKA 773 (783)
Q Consensus 757 ~--~~l~~~~~~gHg~~~~ 773 (783)
+ ++++.|+++||.+..|
T Consensus 148 ~~~~~~l~Y~~aGH~i~~P 166 (213)
T PF08840_consen 148 PHNVEHLSYPGAGHLIEPP 166 (213)
T ss_dssp ----EEEEETTB-S---ST
T ss_pred CCcceEEEcCCCCceecCC
Confidence 4 8889999999998643
|
Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B. |
| >PRK08775 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=4.4e-09 Score=114.42 Aligned_cols=74 Identities=14% Similarity=0.036 Sum_probs=52.4
Q ss_pred CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhcCCCceeE
Q psy2521 584 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGA 662 (783)
Q Consensus 584 ~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~lf~a 662 (783)
.+|.|+++|+||.|+.. . ....+.|+...+..+++.- +-++ +.++|+||||+++..++.++|+++++
T Consensus 98 ~~~~Vi~~Dl~G~g~s~----~------~~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 98 ARFRLLAFDFIGADGSL----D------VPIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cccEEEEEeCCCCCCCC----C------CCCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 48999999999954321 0 1122455555555555432 2234 57999999999999999999999999
Q ss_pred EEEcCCc
Q psy2521 663 ALILVGA 669 (783)
Q Consensus 663 ~i~~~~~ 669 (783)
+|+..+.
T Consensus 166 LvLi~s~ 172 (343)
T PRK08775 166 LVVVSGA 172 (343)
T ss_pred EEEECcc
Confidence 9988764
|
|
| >PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.1e-08 Score=105.30 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=68.8
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.+. .|.... ..| + +|.|+++|+||.|.... .. ...++++...+..+++.. ..
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~-~~l-~-~~~vi~~D~~G~G~S~~---~~------~~~~~~~~~~l~~~l~~~--~~ 65 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVG-EAL-P-DYPRLYIDLPGHGGSAA---IS------VDGFADVSRLLSQTLQSY--NI 65 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHH-HHc-C-CCCEEEecCCCCCCCCC---cc------ccCHHHHHHHHHHHHHHc--CC
Confidence 378999999877664 354443 345 3 79999999999554321 11 124556555555555542 34
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~~ 669 (783)
+++.++|||+||.+++.++.++|+ .+++++...+.
T Consensus 66 ~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 66 LPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 689999999999999999999865 48888876544
|
|
| >KOG3043|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=7e-09 Score=99.62 Aligned_cols=144 Identities=19% Similarity=0.297 Sum_probs=107.4
Q ss_pred HHHHHcCCEEEEEecCCCCCCCC--------hhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHH
Q psy2521 578 CMFLRHFNGIYAIPNIRGGGELG--------EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 649 (783)
Q Consensus 578 ~~~l~~~G~~v~~~~~RG~g~~G--------~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~ 649 (783)
+.-++..||.|++||+-.|.-+- +.|.+ +..-+..+.|+.+.++||+.+| ++.+|+++|.++||-++
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVV 134 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEE
Confidence 44556679999999997652221 13433 3444567899999999999764 46799999999999999
Q ss_pred HHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCC
Q psy2521 650 GACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHD 729 (783)
Q Consensus 650 ~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D 729 (783)
...+...| +|.|+++..|.. .+.++. .+++. | +|++.|+.|
T Consensus 135 v~~~~~~~-~f~a~v~~hps~---------------------~d~~D~---------~~vk~-------P-ilfl~ae~D 175 (242)
T KOG3043|consen 135 VTLSAKDP-EFDAGVSFHPSF---------------------VDSADI---------ANVKA-------P-ILFLFAELD 175 (242)
T ss_pred EEeeccch-hheeeeEecCCc---------------------CChhHH---------hcCCC-------C-EEEEeeccc
Confidence 88888877 788888877732 112221 24444 4 999999999
Q ss_pred CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 730 DRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 730 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..+|+.....+-++|.+. . ....++.+|++.+|||.
T Consensus 176 ~~~p~~~v~~~ee~lk~~----~--~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 176 EDVPPKDVKAWEEKLKEN----P--AVGSQVKTFSGVGHGFV 211 (242)
T ss_pred ccCCHHHHHHHHHHHhcC----c--ccceeEEEcCCccchhh
Confidence 999999888887888766 2 12268999999999996
|
|
| >KOG2624|consensus | Back alignment and domain information |
|---|
Probab=98.86 E-value=3.2e-08 Score=106.73 Aligned_cols=147 Identities=19% Similarity=0.172 Sum_probs=106.5
Q ss_pred CCCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc---HHHHHHHHcCCEEEEEecCCC
Q psy2521 519 FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRG 595 (783)
Q Consensus 519 ~~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG 595 (783)
+....|.+|+..+++.||..+-..-+.... ++.|+|++.||-..++..+--. ......|+++||-|-.-|.||
T Consensus 41 i~~~gy~~E~h~V~T~DgYiL~lhRIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 41 IEKYGYPVEEHEVTTEDGYILTLHRIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHHcCCceEEEEEEccCCeEEEEeeecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 345578899999999999855554443322 7899999999987766554332 234566778899999999999
Q ss_pred CCCCChhHHhhccc--------cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEE
Q psy2521 596 GGELGEDWHNAGRL--------LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAAL 664 (783)
Q Consensus 596 ~g~~G~~~~~~g~~--------~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i 664 (783)
..|.++-...... .+..-...|+-|.++|+.+. +..+++..+|||.|+.....++..+|+ ..+.++
T Consensus 117 -n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 117 -NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred -cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 5566532111110 01122346999999999876 678899999999999999999999987 467778
Q ss_pred EcCCcchh
Q psy2521 665 ILVGALDM 672 (783)
Q Consensus 665 ~~~~~~d~ 672 (783)
+.+|+.-+
T Consensus 194 aLAP~~~~ 201 (403)
T KOG2624|consen 194 ALAPAAFP 201 (403)
T ss_pred eecchhhh
Confidence 88886644
|
|
| >PLN03084 alpha/beta hydrolase fold protein; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.6e-08 Score=105.17 Aligned_cols=122 Identities=16% Similarity=0.068 Sum_probs=81.8
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
+.+|.++.... .+ ++..|.||++||.+.... .|... ...|++ +|.|+++|+||.|.... ... ....
T Consensus 111 ~~~~~~~~y~~---~G---~~~~~~ivllHG~~~~~~--~w~~~-~~~L~~-~~~Via~DlpG~G~S~~---p~~-~~~~ 176 (383)
T PLN03084 111 SSDLFRWFCVE---SG---SNNNPPVLLIHGFPSQAY--SYRKV-LPVLSK-NYHAIAFDWLGFGFSDK---PQP-GYGF 176 (383)
T ss_pred cCCceEEEEEe---cC---CCCCCeEEEECCCCCCHH--HHHHH-HHHHhc-CCEEEEECCCCCCCCCC---Ccc-cccc
Confidence 36777765332 22 123589999999866543 34433 355664 89999999999543221 100 0011
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
...++++...+..++++- ..+++.|+|+|+||.++..++.++|++++++|+..|..
T Consensus 177 ~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 177 NYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred cCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 235667776666666542 23589999999999999999999999999999888753
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=98.83 E-value=3e-06 Score=89.71 Aligned_cols=212 Identities=17% Similarity=0.143 Sum_probs=117.1
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
..+.++|||+.++.+.... ..|+++|+.+++.+..........+++|+|||+.+++...+ .
T Consensus 76 ~~~~~~~~g~~l~~~~~~~----~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~---------------~ 136 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDD----NLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSET---------------T 136 (300)
T ss_pred cEEEECCCCCEEEEEcCCC----CeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecC---------------C
Confidence 4578999999876554322 46999999987654322112223578999999988877622 1
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce--eeecC
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK--TVIPG 369 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~--~l~~~ 369 (783)
..++.++..+.... ........+ ..+.|+|||++|++... ....++++|+.++.. +. ..... .....
T Consensus 137 ~~~~~~d~~~~~~~--~~~~~~~~~---~~~~~s~dg~~l~~~~~---~~~~v~i~d~~~~~~--~~-~~~~~~~~~~~~ 205 (300)
T TIGR03866 137 NMAHFIDTKTYEIV--DNVLVDQRP---RFAEFTADGKELWVSSE---IGGTVSVIDVATRKV--IK-KITFEIPGVHPE 205 (300)
T ss_pred CeEEEEeCCCCeEE--EEEEcCCCc---cEEEECCCCCEEEEEcC---CCCEEEEEEcCccee--ee-eeeecccccccc
Confidence 13444555432111 111111112 35789999999876532 226799999987421 00 00000 00000
Q ss_pred cccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 370 MDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 370 ~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
..... -.++++|+.+++.... ...|..+|+.+.+ ....+... ..+..-.+.++++.|+.....+ ..|.+|
T Consensus 206 ~~~~~~i~~s~dg~~~~~~~~~---~~~i~v~d~~~~~---~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~--~~i~v~ 276 (300)
T TIGR03866 206 AVQPVGIKLTKDGKTAFVALGP---ANRVAVVDAKTYE---VLDYLLVG-QRVWQLAFTPDEKYLLTTNGVS--NDVSVI 276 (300)
T ss_pred cCCccceEECCCCCEEEEEcCC---CCeEEEEECCCCc---EEEEEEeC-CCcceEEECCCCCEEEEEcCCC--CeEEEE
Confidence 00011 1478999987764432 3458888987644 22222222 2222223344545665543333 469999
Q ss_pred ECCCCceeeeecCC
Q psy2521 449 DLNTGKRLHSFPLD 462 (783)
Q Consensus 449 dl~~G~~~~~l~~~ 462 (783)
|+.+++.++.+..+
T Consensus 277 d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 277 DVAALKVIKSIKVG 290 (300)
T ss_pred ECCCCcEEEEEEcc
Confidence 99888877777654
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >COG2936 Predicted acyl esterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.8e-08 Score=111.37 Aligned_cols=144 Identities=17% Similarity=0.155 Sum_probs=107.7
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc--HHHHH---HHHcCCEEEEEecCCCCC
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS--ISRCM---FLRHFNGIYAIPNIRGGG 597 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~--~~~~~---~l~~~G~~v~~~~~RG~g 597 (783)
.+..+.+.++.+||+++..-|++|++ .++.|+|+..+-.|-......+. ..... +++.+||+|+..|.||.+
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~ 92 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRG 92 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccc
Confidence 37788899999999999999999997 38899999988322211111111 11112 445579999999999966
Q ss_pred CCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 598 ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 598 ~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
+....|-.. .. ...+|-.+.|+||.++.+.+ .+|+.+|.|++|+...++|...|--.+|++...+..|+-+-
T Consensus 93 ~SeG~~~~~----~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d 164 (563)
T COG2936 93 GSEGVFDPE----SS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRD 164 (563)
T ss_pred cCCccccee----cc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeecccccccccccc
Confidence 554333221 11 36789999999999999987 68999999999999998887766666999999999987543
|
|
| >PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.4e-08 Score=99.63 Aligned_cols=116 Identities=13% Similarity=0.152 Sum_probs=87.8
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHH
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDD 618 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D 618 (783)
.|..++.|+. .+.+|+||+.||-. ..+.|......-++..||+|+.+++..-.. .....+.++
T Consensus 4 ~~l~v~~P~~---~g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~ 66 (259)
T PF12740_consen 4 KPLLVYYPSS---AGTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVAS 66 (259)
T ss_pred CCeEEEecCC---CCCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHH
Confidence 3567888887 58899999999965 333444456677788999999999654111 222345678
Q ss_pred HHHHHHHHHHc---C-----CCCCCcEEEEEeChhHHHHHHHHhcC-----CCceeEEEEcCCcch
Q psy2521 619 FQAAAEYMINK---K-----YTKPKYITIMGGSNGGLLVGACLNQR-----PELYGAALILVGALD 671 (783)
Q Consensus 619 ~~a~~~~l~~~---~-----~~d~~ri~i~G~S~GG~l~~~~~~~~-----p~lf~a~i~~~~~~d 671 (783)
+.+.++||.+. . -.|-+||+|+|||.||-++..++.++ +..|+|+|..-|+--
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 88999998762 1 24778999999999999999888876 558999999998763
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.8e-06 Score=85.27 Aligned_cols=229 Identities=14% Similarity=0.164 Sum_probs=134.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+.+..+|+||++. ++. +...++++||+++|+..+.-.+.. ..-+++++||++.|.-.+.
T Consensus 64 H~v~dv~~s~dg~~a-lS~----swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSr------------- 125 (315)
T KOG0279|consen 64 HFVSDVVLSSDGNFA-LSA----SWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSR------------- 125 (315)
T ss_pred eEecceEEccCCceE-Eec----cccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCC-------------
Confidence 458889999999954 333 334689999999997655433322 3468999999999875542
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...+.+++.-+.. ...+.+.. +..|..-+.|+|...-.+|.+.. ....+.++|+.+. ......
T Consensus 126 ---DkTiklwnt~g~c--k~t~~~~~-~~~WVscvrfsP~~~~p~Ivs~s--~DktvKvWnl~~~---------~l~~~~ 188 (315)
T KOG0279|consen 126 ---DKTIKLWNTLGVC--KYTIHEDS-HREWVSCVRFSPNESNPIIVSAS--WDKTVKVWNLRNC---------QLRTTF 188 (315)
T ss_pred ---cceeeeeeecccE--EEEEecCC-CcCcEEEEEEcCCCCCcEEEEcc--CCceEEEEccCCc---------chhhcc
Confidence 2345555543321 11122221 14687889999996333333222 2367888999872 111222
Q ss_pred cCcccee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+..... -.+||||..+.. ++..++++.+|++.++ .+..-+....+....+.. ++..+...-+ ..|
T Consensus 189 ~gh~~~v~t~~vSpDGslcas----Ggkdg~~~LwdL~~~k-----~lysl~a~~~v~sl~fsp-nrywL~~at~--~sI 256 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCAS----GGKDGEAMLWDLNEGK-----NLYSLEAFDIVNSLCFSP-NRYWLCAATA--TSI 256 (315)
T ss_pred ccccccEEEEEECCCCCEEec----CCCCceEEEEEccCCc-----eeEeccCCCeEeeEEecC-CceeEeeccC--Cce
Confidence 2222222 259999986553 4556789999998765 122222245566665555 4433333222 349
Q ss_pred EEEECCCCceeeeecCC-CeE--------EEeeeccccccEEEEEEec
Q psy2521 446 DLHDLNTGKRLHSFPLD-LGQ--------ITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~-~g~--------v~~~s~~~d~~~l~~~~ss 484 (783)
.+||+++++.+.++.+. .|. ..++.++.|+.++|..+++
T Consensus 257 kIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td 304 (315)
T KOG0279|consen 257 KIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTD 304 (315)
T ss_pred EEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecC
Confidence 99999877766666554 222 1234556666666655543
|
|
| >PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-07 Score=121.07 Aligned_cols=137 Identities=15% Similarity=0.107 Sum_probs=83.8
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
..+....+.+. .|| +..++.+...- .....|+||++||..+.... |... ...|.. +|.|+++|+||.|....
T Consensus 1342 ~~l~~~~~~v~-~~~--~~~~i~~~~~G-~~~~~~~vVllHG~~~s~~~--w~~~-~~~L~~-~~rVi~~Dl~G~G~S~~ 1413 (1655)
T PLN02980 1342 EQVRTYELRVD-VDG--FSCLIKVHEVG-QNAEGSVVLFLHGFLGTGED--WIPI-MKAISG-SARCISIDLPGHGGSKI 1413 (1655)
T ss_pred CCCceEEEEEc-cCc--eEEEEEEEecC-CCCCCCeEEEECCCCCCHHH--HHHH-HHHHhC-CCEEEEEcCCCCCCCCC
Confidence 34444444443 243 44444433211 12345899999998777653 4443 344554 79999999999654321
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.-............++++.+.+..++++ ...+++.++||||||.+++.++.++|++++++|...+
T Consensus 1414 ~~~~~~~~~~~~~si~~~a~~l~~ll~~--l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1414 QNHAKETQTEPTLSVELVADLLYKLIEH--ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred ccccccccccccCCHHHHHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 1000000011123456666665555554 2346899999999999999999999999998887654
|
|
| >KOG3101|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.3e-08 Score=94.47 Aligned_cols=209 Identities=16% Similarity=0.201 Sum_probs=124.9
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--CCCCCCC--hhHHh---hccc
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELG--EDWHN---AGRL 609 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~G--~~~~~---~g~~ 609 (783)
..+..-++.|.+...+++.|+|.|.-|-........--..+++...+.|.+|+.||- ||-.--| ++|.= +|..
T Consensus 26 c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFY 105 (283)
T KOG3101|consen 26 CSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFY 105 (283)
T ss_pred cceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeE
Confidence 345556677887766667999999988543322211111234555678999999984 6632111 12210 1111
Q ss_pred c-CCcChHHHHHHHHHHHHH---------cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 610 L-KKQNCFDDFQAAAEYMIN---------KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 610 ~-~~~~~~~D~~a~~~~l~~---------~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
. -.+..+..--.+.+|+.+ .--+|+.|++|.||||||+-++.+..++|..|+.+.+.+|+.+...-
T Consensus 106 vnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~c---- 181 (283)
T KOG3101|consen 106 VNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINC---- 181 (283)
T ss_pred EecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccC----
Confidence 1 112222222233333322 12479999999999999999999888999999999999999987642
Q ss_pred ccccchh----hh-CCCCCHHHHHHHHhc---CcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH--HHHHHHHHHhhhC
Q psy2521 680 IAYYSES----EF-GSPNNKTHFHNLLSY---SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH--SYKFIATLQEKIG 749 (783)
Q Consensus 680 ~~~~~~~----~~-g~p~~~~~~~~~~~~---sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~--~~~~~~~L~~~~~ 749 (783)
.|-. .| |+ ++..|+.+.+. +-|.++.. -+||-.|..|...+ .| +..+.++....
T Consensus 182 ---pWGqKAf~gYLG~--~ka~W~~yDat~lik~y~~~~~--------~ilIdqG~~D~Fl~-~qLlPe~l~~a~~~~-- 245 (283)
T KOG3101|consen 182 ---PWGQKAFTGYLGD--NKAQWEAYDATHLIKNYRGVGD--------DILIDQGAADNFLA-EQLLPENLLEACKAT-- 245 (283)
T ss_pred ---cchHHHhhcccCC--ChHHHhhcchHHHHHhcCCCCc--------cEEEecCccchhhh-hhcChHHHHHHhhcc--
Confidence 2321 11 33 44444332222 22333333 29999999998776 32 34444444322
Q ss_pred CCCCCCCcEEEEEeCCCCcc
Q psy2521 750 SLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 750 ~~~~~~~~~~l~~~~~~gHg 769 (783)
...++.++.-++-.|.
T Consensus 246 ----~~~~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 246 ----WQAPVVFRLQEGYDHS 261 (283)
T ss_pred ----ccccEEEEeecCCCcc
Confidence 2468999998888886
|
|
| >KOG4409|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.3e-07 Score=95.63 Aligned_cols=129 Identities=14% Similarity=0.119 Sum_probs=79.8
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
+..+.+... ++.++-..-+.+.. ...+.+|++||- |.+.. .|...+ .-|+. ...|..+|..| +|++-
T Consensus 65 ~~~~~v~i~--~~~~iw~~~~~~~~----~~~~plVliHGy-GAg~g-~f~~Nf-~~La~-~~~vyaiDllG---~G~SS 131 (365)
T KOG4409|consen 65 YSKKYVRIP--NGIEIWTITVSNES----ANKTPLVLIHGY-GAGLG-LFFRNF-DDLAK-IRNVYAIDLLG---FGRSS 131 (365)
T ss_pred cceeeeecC--CCceeEEEeecccc----cCCCcEEEEecc-chhHH-HHHHhh-hhhhh-cCceEEecccC---CCCCC
Confidence 344554444 55555444444433 334556677773 22221 133333 33453 89999999999 55332
Q ss_pred HhhccccCCcChHHHHHHHHHH-HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~-l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+.. ........-.-|+..++. -++.+. +|+.|+|||+||||+...|..+|+.++-+|+..|.
T Consensus 132 RP~-F~~d~~~~e~~fvesiE~WR~~~~L---~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 132 RPK-FSIDPTTAEKEFVESIEQWRKKMGL---EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred CCC-CCCCcccchHHHHHHHHHHHHHcCC---cceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 221 112223334467777764 445544 49999999999999999999999999999998874
|
|
| >PRK06765 homoserine O-acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.8e-07 Score=102.55 Aligned_cols=114 Identities=13% Similarity=0.020 Sum_probs=74.3
Q ss_pred CCccEEEEecCCCCCccC----------CcCcHHH---HHHHHcCCEEEEEecCCCCCC--------CChhHHhhccc--
Q psy2521 553 RRNPVIIYGYGGYGVSVL----------PTFSISR---CMFLRHFNGIYAIPNIRGGGE--------LGEDWHNAGRL-- 609 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~----------~~~~~~~---~~~l~~~G~~v~~~~~RG~g~--------~G~~~~~~g~~-- 609 (783)
.+.++||+.|+-.+.+.. ++|-..+ ...++-.-|-|+++|+-|++. -|+.-...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 456899999986553311 2222111 123444469999999998752 22221111111
Q ss_pred ---cCCcChHHHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 610 ---LKKQNCFDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 610 ---~~~~~~~~D~~a~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
..-..++.|+.+++..|++.-.+ +++. ++|+||||.+++.++.++|+++..+|+.++
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 12235788999888888765333 4675 999999999999999999999998888754
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.73 E-value=9.6e-07 Score=92.66 Aligned_cols=233 Identities=11% Similarity=0.103 Sum_probs=147.8
Q ss_pred CcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEc
Q psy2521 220 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 299 (783)
Q Consensus 220 G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~l 299 (783)
|.+|.|++. -+||.+++.+|+.+.++..-.-...+.++|||+.++|++.--. +......||....
T Consensus 50 GD~IiFt~~------DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~---------ss~~taDly~v~~ 114 (668)
T COG4946 50 GDRIIFTCC------DDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLG---------SSLQTADLYVVPS 114 (668)
T ss_pred CcEEEEEec------hHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEec---------CCCccccEEEEeC
Confidence 888999875 3589999999998887755333367889999999999874321 1334457898888
Q ss_pred CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC--CcEEEEEECCCCCCCcccCCCCceeeecCccceeEEE
Q psy2521 300 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEII 377 (783)
Q Consensus 300 gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~--~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~ 377 (783)
..++.+.+.-|.. .+..-+.|+|||+-|+.+.....- -.++|-+.+++... .+|-- ......+
T Consensus 115 e~Ge~kRiTyfGr----~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~---------e~Lnl--Gpathiv 179 (668)
T COG4946 115 EDGEAKRITYFGR----RFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKT---------EPLNL--GPATHIV 179 (668)
T ss_pred CCCcEEEEEEecc----ccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCcee---------eeccC--CceeeEE
Confidence 7776655544532 233456899999988765432111 16888888877311 11111 1112234
Q ss_pred EeeCCEEEEEEC----------CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 378 ANNGPELIVKTT----------KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 378 s~dg~~l~~~t~----------~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
-.|| .+++-.| +++.+++||.-...+.. ++.++.-. .++. +..+.+ ++++|.+..+|..+||.
T Consensus 180 ~~dg-~ivigRntydLP~WK~YkGGtrGklWis~d~g~t---FeK~vdl~-~~vS-~PmIV~-~RvYFlsD~eG~GnlYS 252 (668)
T COG4946 180 IKDG-IIVIGRNTYDLPHWKGYKGGTRGKLWISSDGGKT---FEKFVDLD-GNVS-SPMIVG-ERVYFLSDHEGVGNLYS 252 (668)
T ss_pred EeCC-EEEEccCcccCcccccccCCccceEEEEecCCcc---eeeeeecC-CCcC-CceEEc-ceEEEEecccCccceEE
Confidence 4455 4554433 24567777765543323 44555433 4443 334454 89999999999999999
Q ss_pred EECCCCceeeeecC-CCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 448 HDLNTGKRLHSFPL-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 448 ~dl~~G~~~~~l~~-~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
.|+ +|+-++.-+. ..+-.. ..+.|+++++|.-. +.+|.||++
T Consensus 253 vdl-dGkDlrrHTnFtdYY~R--~~nsDGkrIvFq~~-----GdIylydP~ 295 (668)
T COG4946 253 VDL-DGKDLRRHTNFTDYYPR--NANSDGKRIVFQNA-----GDIYLYDPE 295 (668)
T ss_pred ecc-CCchhhhcCCchhcccc--ccCCCCcEEEEecC-----CcEEEeCCC
Confidence 999 7887665443 232222 23567888887544 479999993
|
|
| >PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.3e-08 Score=101.50 Aligned_cols=78 Identities=22% Similarity=0.136 Sum_probs=61.3
Q ss_pred EEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 586 GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 586 ~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
|.|+++|.||.|...+. ..........+|+.+.++.+++.-.. +++.++|+|+||.++..++.++|+.++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 67999999995543311 11234445688999999999886333 4599999999999999999999999999999
Q ss_pred cCCc
Q psy2521 666 LVGA 669 (783)
Q Consensus 666 ~~~~ 669 (783)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9885
|
; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A .... |
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.2e-07 Score=111.07 Aligned_cols=108 Identities=12% Similarity=0.124 Sum_probs=67.3
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+...||.++.+..+- +...|+||++||..+.... |... ...|. .||.|+++|+||.|.... . ..
T Consensus 7 ~~~~~g~~l~~~~~g------~~~~~~ivllHG~~~~~~~--w~~~-~~~L~-~~~~Vi~~D~~G~G~S~~---~---~~ 70 (582)
T PRK05855 7 VVSSDGVRLAVYEWG------DPDRPTVVLVHGYPDNHEV--WDGV-APLLA-DRFRVVAYDVRGAGRSSA---P---KR 70 (582)
T ss_pred EEeeCCEEEEEEEcC------CCCCCeEEEEcCCCchHHH--HHHH-HHHhh-cceEEEEecCCCCCCCCC---C---Cc
Confidence 345688888765432 1236899999998766543 4443 34555 599999999999553321 1 11
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
....+++++.+.+..+++.-.. +.++.|+|||+||.++..++.+
T Consensus 71 ~~~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 71 TAAYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 1123455555555555443111 2349999999999988777655
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-06 Score=90.48 Aligned_cols=237 Identities=17% Similarity=0.124 Sum_probs=134.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+--.+||++|||||-++... ..-||...-++.-.+.-|..+. ....+.||||+++++-...++
T Consensus 227 VWfl~FS~nGkyLAsaSkD~---Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e------------ 291 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDS---TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE------------ 291 (519)
T ss_pred EEEEEEcCCCeeEeeccCCc---eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH------------
Confidence 56689999999999765431 1234444433332222232221 235789999999988665432
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
.++++++.++. -+..|.... .....+.+|-|||..++.-+ ....++.+|+++.. ...|.-.-.
T Consensus 292 ----~~~lwDv~tgd--~~~~y~~~~-~~S~~sc~W~pDg~~~V~Gs----~dr~i~~wdlDgn~------~~~W~gvr~ 354 (519)
T KOG0293|consen 292 ----VLSLWDVDTGD--LRHLYPSGL-GFSVSSCAWCPDGFRFVTGS----PDRTIIMWDLDGNI------LGNWEGVRD 354 (519)
T ss_pred ----heeeccCCcch--hhhhcccCc-CCCcceeEEccCCceeEecC----CCCcEEEecCCcch------hhccccccc
Confidence 37788887753 223443321 11235789999999976432 23678999998731 112321111
Q ss_pred CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
..-+. .+++||++++.++.. .++..++..+.. -+.++.+. ..+..+.+.+++++++....+ ..+.+
T Consensus 355 --~~v~dlait~Dgk~vl~v~~d----~~i~l~~~e~~~---dr~lise~--~~its~~iS~d~k~~LvnL~~--qei~L 421 (519)
T KOG0293|consen 355 --PKVHDLAITYDGKYVLLVTVD----KKIRLYNREARV---DRGLISEE--QPITSFSISKDGKLALVNLQD--QEIHL 421 (519)
T ss_pred --ceeEEEEEcCCCcEEEEEecc----cceeeechhhhh---hhcccccc--CceeEEEEcCCCcEEEEEccc--CeeEE
Confidence 11122 488999999987743 346666655432 12255543 556677777778888777665 57899
Q ss_pred EECCCCceeeeecCC---CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLD---LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~---~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
||++..+.++..... ...|. ++-..++.-++. |-..-..+|+++.
T Consensus 422 WDl~e~~lv~kY~Ghkq~~fiIr--SCFgg~~~~fia--SGSED~kvyIWhr 469 (519)
T KOG0293|consen 422 WDLEENKLVRKYFGHKQGHFIIR--SCFGGGNDKFIA--SGSEDSKVYIWHR 469 (519)
T ss_pred eecchhhHHHHhhcccccceEEE--eccCCCCcceEE--ecCCCceEEEEEc
Confidence 999755444443332 22221 122223323322 3334568999998
|
|
| >KOG1454|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.3e-07 Score=99.08 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=69.3
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
...|.||++||.-++. ..|......+-...|+.|.+.|.-|+|- .++.+.+. .-...+....++.+...-..
T Consensus 56 ~~~~pvlllHGF~~~~--~~w~~~~~~L~~~~~~~v~aiDl~G~g~--~s~~~~~~----~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASS--FSWRRVVPLLSKAKGLRVLAIDLPGHGY--SSPLPRGP----LYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCCc--ccHhhhccccccccceEEEEEecCCCCc--CCCCCCCC----ceehhHHHHHHHHHHHhhcC
Confidence 4678899999965533 3344443333333379999999999442 12222221 14456666766666554333
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEE
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAAL 664 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i 664 (783)
.++.++|+|+||+++..+|..+|+..+.++
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 349999999999999999999999999888
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=4.7e-05 Score=81.45 Aligned_cols=256 Identities=13% Similarity=0.116 Sum_probs=140.2
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-cccccc--ccccCeeEEeeCCCEEEEEEeecCC------
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLK--NVKFPSISWTHDHKGFFYNQYCDIN------ 278 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~------ 278 (783)
...+.-..+||.|-||| +|+....++|||....+. +.-++. ......++|+.|+++|+-+......
T Consensus 59 ~~~vtVAkySPsG~yiA-----SGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~ 133 (603)
T KOG0318|consen 59 AHQVTVAKYSPSGFYIA-----SGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL 133 (603)
T ss_pred cceeEEEEeCCCceEEe-----ecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence 34566688999999887 245556799999866443 222211 1123589999999999877621110
Q ss_pred ---CCCCCCccc--------ccCCceEEEEEcCCCCCCceeEEecCC---------CCeeEEEEEEecCCcEEEEEEecC
Q psy2521 279 ---GTADGTETT--------AHMGQKIYYHVLGTEQDKDIPVVEFPN---------GRSLGLHSEVTDCGRYLLVSTSNN 338 (783)
Q Consensus 279 ---~~~~g~~~~--------~~~~~~v~~~~lgt~~~~d~~v~~~~~---------~~~~~~~~~~SpDGk~l~~~~~~~ 338 (783)
+...|+.+. .-++.+-+|..-+.. ..-+.+|+.|. +..|...+.+||||.+.+-...+
T Consensus 134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sd-Dn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsD- 211 (603)
T KOG0318|consen 134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSD-DNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSD- 211 (603)
T ss_pred ecCCCccceeeccceeEeeeeccCCCceEEEeccC-CCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCC-
Confidence 000011000 011222233322221 12244566552 22345578899999987644322
Q ss_pred CCCcEEEEEECCCCCCCcccCCCCceeee--cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee
Q psy2521 339 TQGSDLHYFDLHSLPDGKISGKFPLKTVI--PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414 (783)
Q Consensus 339 ~~~~~l~~~dl~~g~~~~l~~~~~~~~l~--~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li 414 (783)
.+++++|-.+|+. .-.+- ....++ +. .|+||+++|+-.+.. ..-+|| |+.+.. -.+++.
T Consensus 212 ---gki~iyDGktge~--------vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD--kt~KIW--dVs~~s--lv~t~~ 274 (603)
T KOG0318|consen 212 ---GKIYIYDGKTGEK--------VGELEDSDAHKGSIFALSWSPDSTQFLTVSAD--KTIKIW--DVSTNS--LVSTWP 274 (603)
T ss_pred ---ccEEEEcCCCccE--------EEEecCCCCccccEEEEEECCCCceEEEecCC--ceEEEE--Eeeccc--eEEEee
Confidence 5899999887531 11111 112222 23 599999998865543 123444 444433 122222
Q ss_pred cCC--CCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEE
Q psy2521 415 PED--ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 492 (783)
Q Consensus 415 ~~~--~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy 492 (783)
-.. ++..+ +..+.+ ++|+...... .|-.+++.+++.+..+....-.|+.++.+++++.++ |-.--+.|-
T Consensus 275 ~~~~v~dqqv-G~lWqk-d~lItVSl~G---~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~----SgsyDG~I~ 345 (603)
T KOG0318|consen 275 MGSTVEDQQV-GCLWQK-DHLITVSLSG---TINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY----SGSYDGHIN 345 (603)
T ss_pred cCCchhceEE-EEEEeC-CeEEEEEcCc---EEEEecccCCChhheecccccceeEEEEcCCCCEEE----eeccCceEE
Confidence 222 12333 334444 6777666544 466777777776666666556678888888886555 223345778
Q ss_pred EEeC
Q psy2521 493 HCNI 496 (783)
Q Consensus 493 ~~d~ 496 (783)
.+|.
T Consensus 346 ~W~~ 349 (603)
T KOG0318|consen 346 SWDS 349 (603)
T ss_pred EEec
Confidence 8887
|
|
| >PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases | Back alignment and domain information |
|---|
Probab=98.68 E-value=3.2e-08 Score=114.73 Aligned_cols=214 Identities=19% Similarity=0.185 Sum_probs=116.9
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccC---CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc--CCc
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL---PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL--KKQ 613 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~--~~~ 613 (783)
+..-|+.|+......+.|++||+|||.-.... ..+.. ..++..++++|+.+|||-|- +| |...+... .+.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~--~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN 183 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG--ASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGN 183 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT--HHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBST
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccc--cccccCCCEEEEEecccccc-cc--cccccccccCchh
Confidence 66778889886545589999999998433322 22322 24455679999999999632 22 11111111 134
Q ss_pred ChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchh-hhccccc--ccccch
Q psy2521 614 NCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDM-LRFNKFT--IAYYSE 685 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~-~~~~~~~--~~~~~~ 685 (783)
..+.|.+.|++|++++ -..||++|.|+|+|+||..+...+..- ..||+.+|+.+|..-. ....... ......
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~~~~~~~~~~~~~~~la 263 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALSPWATSENPEQQAQKLA 263 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTSTTSSBSHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccccccccccccchhhhhhh
Confidence 4688999999999875 236999999999999999999888761 2499999999993321 1111100 011122
Q ss_pred hhhCCCCC--HHHHHHHHhcCccc------CCCCCCCCCc--CCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC
Q psy2521 686 SEFGSPNN--KTHFHNLLSYSPLH------NIKVPPNNTQ--YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 755 (783)
Q Consensus 686 ~~~g~p~~--~~~~~~~~~~sp~~------~v~~~~~~~~--~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 755 (783)
...|.+.. .+..+.|++.++-. .+........ .| ++ |..+-+.+..++.+.=+.. .
T Consensus 264 ~~lgc~~~~~~~~l~cLR~~~~~~L~~a~~~~~~~~~~~~~f~P---vv----Dg~~lp~~p~~~~~~g~~~-------~ 329 (535)
T PF00135_consen 264 KALGCDDSDSSDILECLRSLPAEELLAAQNKLWPESGFFPPFGP---VV----DGDFLPDSPSELLKSGRFN-------K 329 (535)
T ss_dssp HHTTSTTSSHHHHHHHHHHS-HHHHHHHHHCCSTTSSSSSSSSB---BE----BSSSSSS-HHHHHHTTTST-------T
T ss_pred hhhccccccccchhhhhhhhhccchhhhhhcccccccccccCCc---ee----cccccccCccccccccccc-------e
Confidence 34466532 24556666655421 1111000001 12 12 3335555555444331112 6
Q ss_pred CcEEEEEeCCCCccCC
Q psy2521 756 NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 756 ~~~~l~~~~~~gHg~~ 771 (783)
.|+.+=.-.++|..+.
T Consensus 330 vP~liG~t~~Eg~~~~ 345 (535)
T PF00135_consen 330 VPLLIGSTSDEGSLFA 345 (535)
T ss_dssp SEEEEEEETBTTHHHH
T ss_pred eeeecccccccchhhh
Confidence 7888888888887753
|
Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A .... |
| >PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO | Back alignment and domain information |
|---|
Probab=98.67 E-value=4e-07 Score=88.64 Aligned_cols=170 Identities=15% Similarity=0.128 Sum_probs=96.4
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCC--EEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFN--GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G--~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
+|+|+||--.+....- .....+++++.| ..+.++|+.- ...+.++.++.++++. .+
T Consensus 1 ~ilYlHGF~Ssp~S~K-a~~l~~~~~~~~~~~~~~~p~l~~-------------------~p~~a~~~l~~~i~~~--~~ 58 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFK-AQALKQYFAEHGPDIQYPCPDLPP-------------------FPEEAIAQLEQLIEEL--KP 58 (187)
T ss_pred CeEEecCCCCCCCCHH-HHHHHHHHHHhCCCceEECCCCCc-------------------CHHHHHHHHHHHHHhC--CC
Confidence 4899999644332211 122345566555 3445555442 1345566667777653 34
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCC--CCHHHHHHHHhcCcccCCCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP--NNKTHFHNLLSYSPLHNIKVP 712 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p--~~~~~~~~~~~~sp~~~v~~~ 712 (783)
+.++|+|.|+||+.+..++.+++ .++ |+.+|.+.........+|..-...++.. ...+.+..++++... .+..
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~~l~~l~~~-~~~~- 133 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIEELKALEVP-YPTN- 133 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhhhcceEecc-ccCC-
Confidence 45999999999999999988774 234 7788888766543322222110111111 122223333333211 1222
Q ss_pred CCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 713 ~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.. +++++++..|..+++.++.+.+ +.. ...+.+|.+|.|..
T Consensus 134 ----~~-~~lvll~~~DEvLd~~~a~~~~---~~~-----------~~~i~~ggdH~f~~ 174 (187)
T PF05728_consen 134 ----PE-RYLVLLQTGDEVLDYREAVAKY---RGC-----------AQIIEEGGDHSFQD 174 (187)
T ss_pred ----Cc-cEEEEEecCCcccCHHHHHHHh---cCc-----------eEEEEeCCCCCCcc
Confidence 22 3999999999999997665443 322 23456888999975
|
One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised. |
| >TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.3e-07 Score=101.08 Aligned_cols=110 Identities=15% Similarity=0.043 Sum_probs=69.4
Q ss_pred ccEEEEecCCCCCccCCcCc--HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFS--ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
.+.||++||..+........ .++..+|.++||.|+++|.||.|.....+ .......+++.++++++.+. +
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~------~~ddY~~~~i~~al~~v~~~--~ 259 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADK------TFDDYIRDGVIAALEVVEAI--T 259 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccC------ChhhhHHHHHHHHHHHHHHh--c
Confidence 35567777754333222111 23456666679999999999955432211 11123345678889888764 4
Q ss_pred CCCcEEEEEeChhHHHHHH----HHhcC-CCceeEEEEcCCcchh
Q psy2521 633 KPKYITIMGGSNGGLLVGA----CLNQR-PELYGAALILVGALDM 672 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~----~~~~~-p~lf~a~i~~~~~~d~ 672 (783)
..+++.++|+|+||.+++. ++..+ |+..++++.....+|.
T Consensus 260 g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df 304 (532)
T TIGR01838 260 GEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDF 304 (532)
T ss_pred CCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCC
Confidence 5679999999999998632 33444 7777877776665553
|
This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.8e-06 Score=85.43 Aligned_cols=94 Identities=12% Similarity=0.073 Sum_probs=57.5
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
.||||++++.-.+-. ..|-.++..+++. ...+--+- ..+.+-.++.+ .+|+++...| +.|.+|++.+-+.
T Consensus 374 ~fSPd~r~IASaSFD----kSVkLW~g~tGk~--lasfRGHv-~~VYqvawsaD-sRLlVS~SkD--sTLKvw~V~tkKl 443 (480)
T KOG0271|consen 374 SFSPDGRYIASASFD----KSVKLWDGRTGKF--LASFRGHV-AAVYQVAWSAD-SRLLVSGSKD--STLKVWDVRTKKL 443 (480)
T ss_pred EECCCccEEEEeecc----cceeeeeCCCcch--hhhhhhcc-ceeEEEEeccC-ccEEEEcCCC--ceEEEEEeeeeee
Confidence 488887766543322 2355556555541 11111111 34555556665 8999998887 5788888866555
Q ss_pred eeeecCCCeEEEeeeccccccEEE
Q psy2521 456 LHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 456 ~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
...|+.....|..++++||+..+.
T Consensus 444 ~~DLpGh~DEVf~vDwspDG~rV~ 467 (480)
T KOG0271|consen 444 KQDLPGHADEVFAVDWSPDGQRVA 467 (480)
T ss_pred cccCCCCCceEEEEEecCCCceee
Confidence 555554455677889999987665
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.61 E-value=4e-06 Score=82.88 Aligned_cols=146 Identities=17% Similarity=0.172 Sum_probs=89.5
Q ss_pred eEEECCCCcEEEEEEec----CCCc---eEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 213 LYAFSDNGKHFAYCLSK----SGSD---WNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~----~G~d---~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+.|+|+|++|++.++. +|.- ...|+.++..+.......+. ......++|+|+|+.|+.+...
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~--------- 80 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS--------- 80 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEcc---------
Confidence 47899999999998872 2211 24688887766544333332 1124689999999999887621
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.+.++.++++.. + .++..+... ...+.|||+|++|++.... ....+|.++|..+. ..+
T Consensus 81 -----~~~~v~lyd~~~---~--~i~~~~~~~--~n~i~wsP~G~~l~~~g~~-n~~G~l~~wd~~~~--~~i------- 138 (194)
T PF08662_consen 81 -----MPAKVTLYDVKG---K--KIFSFGTQP--RNTISWSPDGRFLVLAGFG-NLNGDLEFWDVRKK--KKI------- 138 (194)
T ss_pred -----CCcccEEEcCcc---c--EeEeecCCC--ceEEEECCCCCEEEEEEcc-CCCcEEEEEECCCC--EEe-------
Confidence 123566666641 2 333333322 2468999999999986533 23367999999862 111
Q ss_pred eeecCccceeEEEEeeCCEEEEEEC
Q psy2521 365 TVIPGMDHHHEIIANNGPELIVKTT 389 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~~~t~ 389 (783)
............|+|||++|+..+.
T Consensus 139 ~~~~~~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 139 STFEHSDATDVEWSPDGRYLATATT 163 (194)
T ss_pred eccccCcEEEEEEcCCCCEEEEEEe
Confidence 1111111222259999999887654
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.8e-05 Score=84.45 Aligned_cols=260 Identities=17% Similarity=0.184 Sum_probs=156.1
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCc------eE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD------WN 235 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d------~~ 235 (783)
.++++|.++.|.-..+|.+...|++++..+| +.+-| .+. ......+.|++||+.+.|........ ..
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg--~~l~d--~i~---~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETG--KFLPD--GIE---NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTT--EEEEE--EEE---EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCC--cCcCC--ccc---ccccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 4557899999998888899999999987554 33322 110 11123399999999999998776555 68
Q ss_pred EEEEEECCCCcccccc-c----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCC---CCCce
Q psy2521 236 TLHIKDVDTGKDYPEV-L----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE---QDKDI 307 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~-~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~---~~~d~ 307 (783)
+||.+.+.++...... . ....+.++.+|+|++.|+....... . ...+|+.++... ...-.
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~-----------~-~s~v~~~d~~~~~~~~~~~~ 270 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGT-----------S-ESEVYLLDLDDGGSPDAKPK 270 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSS-----------S-EEEEEEEECCCTTTSS-SEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccc-----------c-CCeEEEEeccccCCCcCCcE
Confidence 9999999887533111 1 1111347789999999888774321 1 368999999874 23444
Q ss_pred eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce-eeecCccc-eeEEEEeeCCEEE
Q psy2521 308 PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGMDH-HHEIIANNGPELI 385 (783)
Q Consensus 308 ~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~-~l~~~~~~-~~~~~s~dg~~l~ 385 (783)
++....+...+ .+... |..+++.++.......|..++++... ...+. .++..... ....++..+++|+
T Consensus 271 ~l~~~~~~~~~--~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~------~~~~~~~l~~~~~~~~l~~~~~~~~~Lv 340 (414)
T PF02897_consen 271 LLSPREDGVEY--YVDHH--GDRLYILTNDDAPNGRLVAVDLADPS------PAEWWTVLIPEDEDVSLEDVSLFKDYLV 340 (414)
T ss_dssp EEEESSSS-EE--EEEEE--TTEEEEEE-TT-TT-EEEEEETTSTS------GGGEEEEEE--SSSEEEEEEEEETTEEE
T ss_pred EEeCCCCceEE--EEEcc--CCEEEEeeCCCCCCcEEEEecccccc------cccceeEEcCCCCceeEEEEEEECCEEE
Confidence 55554332222 22222 66666666665555899999998721 11234 34443332 3445778889999
Q ss_pred EEECCCCCCceEEEEcCC-CCCCCCcEEeecCCCCceEEEEE-EeeCCEEEEEEec-CCeeEEEEEECCCCce
Q psy2521 386 VKTTKNAPKGKVVTINLN-NPCEKNWKTLIPEDENRTLDVVA-AVANNKLIVHYIQ-NVRSVMDLHDLNTGKR 455 (783)
Q Consensus 386 ~~t~~~~~~~~L~~~d~~-~~~~~~~~~li~~~~~~~l~~~~-~~~g~~l~~~~~~-~g~~~l~~~dl~~G~~ 455 (783)
+....++ ..+|..+++. +.. ...+.... ...+.... -.+++.+++.+.. ..++.++.+|+.+|+.
T Consensus 341 l~~~~~~-~~~l~v~~~~~~~~---~~~~~~p~-~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 341 LSYRENG-SSRLRVYDLDDGKE---SREIPLPE-AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp EEEEETT-EEEEEEEETT-TEE---EEEEESSS-SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred EEEEECC-ccEEEEEECCCCcE---EeeecCCc-ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 8777654 5689999998 432 12222222 22233332 2233567666654 4457899999988875
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >COG0627 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.6e-07 Score=97.14 Aligned_cols=206 Identities=17% Similarity=0.106 Sum_probs=127.2
Q ss_pred CCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCC--------------CC-CCCChhHHhhccccCCcCh
Q psy2521 552 NRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIR--------------GG-GELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~R--------------G~-g~~G~~~~~~g~~~~~~~~ 615 (783)
+++.|++++.||--... .-..+. ......+..|++++.+|.. |+ .+|=-+|.+...... ...
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~-g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q 128 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLD-GLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQ 128 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEecc-chhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccc
Confidence 56788888888854332 111111 1234455678888887433 32 122234444321111 244
Q ss_pred HHHHHHH-HH-HHHHcCCCCC--CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc-------ccccc
Q psy2521 616 FDDFQAA-AE-YMINKKYTKP--KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-------IAYYS 684 (783)
Q Consensus 616 ~~D~~a~-~~-~l~~~~~~d~--~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~-------~~~~~ 684 (783)
+++|+.. +- .+.+...++. ++.+|.|+||||+-++.++..+|++|+.+.+.+|+++.......+ .+..+
T Consensus 129 ~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~ 208 (316)
T COG0627 129 WETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAF 208 (316)
T ss_pred hhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccH
Confidence 6677653 22 2233344454 389999999999999999999999999999999999887432211 11122
Q ss_pred hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC---------cCCcEEEEecCCCCCCC--cHHHHHHHHHHHhhhCCCCC
Q psy2521 685 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT---------QYPATLVLTGDHDDRVP--PLHSYKFIATLQEKIGSLPY 753 (783)
Q Consensus 685 ~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~---------~~P~~Li~~g~~D~~V~--~~~~~~~~~~L~~~~~~~~~ 753 (783)
...||.+.++ ..++++|..++++..... .-|.+++.+|..|..-. ...+.++.+++++.
T Consensus 209 ~~~~G~~~~~----~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~------ 278 (316)
T COG0627 209 NAMLGPDSDP----AWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAA------ 278 (316)
T ss_pred HHhcCCCccc----cccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhc------
Confidence 2345655332 234566665554210001 33568999999998764 23478899999988
Q ss_pred CCCcEEEEEeCCCCccC
Q psy2521 754 QKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 754 ~~~~~~l~~~~~~gHg~ 770 (783)
|.+..++..++..|..
T Consensus 279 -g~~~~~~~~~~G~Hsw 294 (316)
T COG0627 279 -GIPNGVRDQPGGDHSW 294 (316)
T ss_pred -CCCceeeeCCCCCcCH
Confidence 8999999988889975
|
|
| >PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold | Back alignment and domain information |
|---|
Probab=98.56 E-value=4.9e-06 Score=83.74 Aligned_cols=236 Identities=14% Similarity=0.071 Sum_probs=135.6
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.+.+.+.+.+|..+..--++-.......+..+||-+||.||+..+..|.. ..|.++|+.++..|+.|.|.-...
T Consensus 6 ~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~---~~l~~~~iR~I~iN~PGf~~t~~~--- 79 (297)
T PF06342_consen 6 RKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIR---PPLDEAGIRFIGINYPGFGFTPGY--- 79 (297)
T ss_pred EEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhh---hHHHHcCeEEEEeCCCCCCCCCCC---
Confidence 44556667777766665555443333445669999999999998765543 567778999999999995432211
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc----------------
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA---------------- 669 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~---------------- 669 (783)
.. -...-.+-..-++.|.++--++ +++.++|||.|+-.++.++..+|- .++++..|+
T Consensus 80 ---~~-~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~G~r~HkgIrp~~r~~~ 152 (297)
T PF06342_consen 80 ---PD-QQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPPGLRPHKGIRPLSRMET 152 (297)
T ss_pred ---cc-cccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCCccccccCcCHHHHHHH
Confidence 11 1111223333344444443344 799999999999999999999873 355555442
Q ss_pred ----chhhhccccccc---ccchhhhCCC--CCHHHHHHHHhcCcc---------cCCCCCCCCCcCCcEEEEecCCCCC
Q psy2521 670 ----LDMLRFNKFTIA---YYSESEFGSP--NNKTHFHNLLSYSPL---------HNIKVPPNNTQYPATLVLTGDHDDR 731 (783)
Q Consensus 670 ----~d~~~~~~~~~~---~~~~~~~g~p--~~~~~~~~~~~~sp~---------~~v~~~~~~~~~P~~Li~~g~~D~~ 731 (783)
.+++.. +... ......+|-- .-.+....++...-. ..+.. .+.| +|+..|.+|..
T Consensus 153 i~~l~~~lp~--~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~----~~ik-vli~ygg~DhL 225 (297)
T PF06342_consen 153 INYLYDLLPR--FIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNK----KPIK-VLIAYGGKDHL 225 (297)
T ss_pred HHHHHHHhhH--HHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhcc----CCCc-EEEEEcCcchh
Confidence 111000 0000 0001122322 112333334422211 12222 3466 99999999999
Q ss_pred CCcHHHHHHHHHHHhhhC-----CCC-----------CCCCcEEEEEeCCCCccCCccchhhhhcc
Q psy2521 732 VPPLHSYKFIATLQEKIG-----SLP-----------YQKNPLLLRVEQDAGHGQGKALDIELKNP 781 (783)
Q Consensus 732 V~~~~~~~~~~~L~~~~~-----~~~-----------~~~~~~~l~~~~~~gHg~~~~~~~~~~~~ 781 (783)
|--+-+.+++...+...- ..+ .++..-.-..+.+.||...+...+.|.+.
T Consensus 226 IEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~ 291 (297)
T PF06342_consen 226 IEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEA 291 (297)
T ss_pred hHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHH
Confidence 988777777776654210 000 12344445566788998888777766553
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.56 E-value=9.1e-05 Score=79.18 Aligned_cols=237 Identities=16% Similarity=0.150 Sum_probs=125.4
Q ss_pred EECCCCcEEEEEEe-----cCCCceEEEEEEECCCCcccccccc--------ccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 215 AFSDNGKHFAYCLS-----KSGSDWNTLHIKDVDTGKDYPEVLK--------NVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 215 ~~SPDG~~la~~~~-----~~G~d~~~i~v~Dl~tg~~~~~~~~--------~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
.+||||+.|..+.. ..|.+...|-|+|++|++.+.+..- ......++.|||||.+|.....+
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p----- 126 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP----- 126 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC-----
Confidence 49999999887765 2344556799999999987643221 11224789999999888665331
Q ss_pred CCCcccccCCceEEEEEcCCCCCCc-------eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKD-------IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d-------~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...|-+.++.+...-. ..+|...+.. ....+.||+.+.+..... +......
T Consensus 127 ---------~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~----~~~~~~Dg~~~~v~~d~~---g~~~~~~------ 184 (352)
T TIGR02658 127 ---------SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDT----FFMHCRDGSLAKVGYGTK---GNPKIKP------ 184 (352)
T ss_pred ---------CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCc----cEEEeecCceEEEEecCC---CceEEee------
Confidence 2246666665432100 1122111110 112345666555443221 1111100
Q ss_pred CcccCCCCceeeecCc-cc--eeEEEEe-eCCEEEEEECCCCCCceEEEEcCCCCCC---CCcEEeecCC---CC--ceE
Q psy2521 355 GKISGKFPLKTVIPGM-DH--HHEIIAN-NGPELIVKTTKNAPKGKVVTINLNNPCE---KNWKTLIPED---EN--RTL 422 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~-~~--~~~~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~---~~~~~li~~~---~~--~~l 422 (783)
.+++.+. +. ..+.+++ || +.+|.++. +.|+.+|+.+.+. ..|..+.... .+ .-.
T Consensus 185 ---------~~vf~~~~~~v~~rP~~~~~dg-~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~ 250 (352)
T TIGR02658 185 ---------TEVFHPEDEYLINHPAYSNKSG-RLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGW 250 (352)
T ss_pred ---------eeeecCCccccccCCceEcCCC-cEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCcc
Confidence 0111110 00 0012456 55 55556665 5799999755321 1232221111 01 112
Q ss_pred EEEEEe-eCCEEEEEEe-------cCCeeEEEEEECCCCceeeeecCCCeEEEeeecccccc-EEEEEEecCCCCceEEE
Q psy2521 423 DVVAAV-ANNKLIVHYI-------QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN-EVFYGFTSFLQPGTIYH 493 (783)
Q Consensus 423 ~~~~~~-~g~~l~~~~~-------~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~-~l~~~~ss~~~P~~vy~ 493 (783)
+.+.+. +++++|+... .++-.+|+++|.++++.+..|..... +.++..++|++ .+|.+- . ....+..
T Consensus 251 q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~-~~~iavS~Dgkp~lyvtn-~--~s~~VsV 326 (352)
T TIGR02658 251 QQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHE-IDSINVSQDAKPLLYALS-T--GDKTLYI 326 (352)
T ss_pred eeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCc-eeeEEECCCCCeEEEEeC-C--CCCcEEE
Confidence 234444 4467776443 22336899999999998888887533 34677789988 555332 2 2346889
Q ss_pred EeC
Q psy2521 494 CNI 496 (783)
Q Consensus 494 ~d~ 496 (783)
+|.
T Consensus 327 iD~ 329 (352)
T TIGR02658 327 FDA 329 (352)
T ss_pred EEC
Confidence 998
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.7e-05 Score=78.11 Aligned_cols=235 Identities=17% Similarity=0.173 Sum_probs=135.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..+.|+|||++|+.+.. ...++++|+.+++..... ........+.|+|+++.|+....
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------------- 71 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSG-----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS------------- 71 (289)
T ss_pred CCEEEEEEcCCCCEEEEeec-----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC-------------
Confidence 34788999999999987653 257999999887643322 12222247899999987776652
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...++++++.+.. ....+.... .....+.|+++++.++... ....+.++|+.++. ....+
T Consensus 72 ---~~~i~i~~~~~~~--~~~~~~~~~--~~i~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~---------~~~~~ 131 (289)
T cd00200 72 ---DKTIRLWDLETGE--CVRTLTGHT--SYVSSVAFSPDGRILSSSS----RDKTIKVWDVETGK---------CLTTL 131 (289)
T ss_pred ---CCeEEEEEcCccc--ceEEEeccC--CcEEEEEEcCCCCEEEEec----CCCeEEEEECCCcE---------EEEEe
Confidence 2367788876542 222232222 2346788999987766432 23689999987521 11112
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC-EEEEEEecCCeeE
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN-KLIVHYIQNVRSV 444 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~-~l~~~~~~~g~~~ 444 (783)
........ .|++++..++. ... +..|..+|+..... ...+ ... ...+..+.+..++ .+++... + ..
T Consensus 132 ~~~~~~i~~~~~~~~~~~l~~-~~~---~~~i~i~d~~~~~~--~~~~-~~~-~~~i~~~~~~~~~~~l~~~~~-~--~~ 200 (289)
T cd00200 132 RGHTDWVNSVAFSPDGTFVAS-SSQ---DGTIKLWDLRTGKC--VATL-TGH-TGEVNSVAFSPDGEKLLSSSS-D--GT 200 (289)
T ss_pred ccCCCcEEEEEEcCcCCEEEE-EcC---CCcEEEEEcccccc--ceeE-ecC-ccccceEEECCCcCEEEEecC-C--Cc
Confidence 21221122 47787665554 321 34588888865431 2222 222 2233334433323 5555544 3 46
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|.+||+.+++.+..+....+.+..+.++++ ..+++..+ ....++.+|+
T Consensus 201 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~---~~~~i~i~~~ 248 (289)
T cd00200 201 IKLWDLSTGKCLGTLRGHENGVNSVAFSPD-GYLLASGS---EDGTIRVWDL 248 (289)
T ss_pred EEEEECCCCceecchhhcCCceEEEEEcCC-CcEEEEEc---CCCcEEEEEc
Confidence 889999777766655433445666777776 34444433 3457888888
|
|
| >COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.2e-06 Score=87.94 Aligned_cols=138 Identities=17% Similarity=0.188 Sum_probs=80.5
Q ss_pred EEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCE-EEEEecCCC---------CCC
Q psy2521 530 YFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG-IYAIPNIRG---------GGE 598 (783)
Q Consensus 530 ~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~-~v~~~~~RG---------~g~ 598 (783)
-+.+. -|++-.+++..|++..++.++|+|.+.-|.--.. .....+..++++.=. +.+...++. ...
T Consensus 13 ~l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf~---~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~D 89 (264)
T COG2819 13 DLKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVFN---ALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYD 89 (264)
T ss_pred eeeecCCCcEEEEEecCCCCCCCCCCCcEEEEecchhhhc---hHHHHhhhhhhcCCCceEEEecccccccccccccccc
Confidence 34444 4577889999999987666799777666642211 111122344443111 122222222 111
Q ss_pred CChhH----Hh---hc-c-ccCCcChHHHHH-HHHHHHHHcC-CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 599 LGEDW----HN---AG-R-LLKKQNCFDDFQ-AAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 599 ~G~~~----~~---~g-~-~~~~~~~~~D~~-a~~~~l~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
|-+.- .. .+ . ...+...|.+|+ .-+.=++++. -++++|.+|+|||+||++++.++-.+|+.|...++.+
T Consensus 90 yTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~S 169 (264)
T COG2819 90 YTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLIS 169 (264)
T ss_pred CCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeec
Confidence 21100 00 00 1 112223454444 3455555554 4899999999999999999999999999999999999
Q ss_pred Ccc
Q psy2521 668 GAL 670 (783)
Q Consensus 668 ~~~ 670 (783)
|-+
T Consensus 170 PSl 172 (264)
T COG2819 170 PSL 172 (264)
T ss_pred chh
Confidence 855
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=98.50 E-value=0.00027 Score=72.91 Aligned_cols=221 Identities=14% Similarity=0.177 Sum_probs=128.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..+.|+|++++|+.+.. ...|+++|+.+++.+... ........+.|+|+++ ++++..
T Consensus 54 i~~~~~~~~~~~l~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~--------------- 112 (289)
T cd00200 54 VRDVAASADGTYLASGSS-----DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGR-ILSSSS--------------- 112 (289)
T ss_pred eeEEEECCCCCEEEEEcC-----CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCC-EEEEec---------------
Confidence 567899999988887653 256999999987544322 1222336789999965 444442
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
....+.++++.+.. ....+.. .......+.++|++++++... ....++++|+.++.. .. ....
T Consensus 113 ~~~~i~~~~~~~~~--~~~~~~~--~~~~i~~~~~~~~~~~l~~~~----~~~~i~i~d~~~~~~--------~~-~~~~ 175 (289)
T cd00200 113 RDKTIKVWDVETGK--CLTTLRG--HTDWVNSVAFSPDGTFVASSS----QDGTIKLWDLRTGKC--------VA-TLTG 175 (289)
T ss_pred CCCeEEEEECCCcE--EEEEecc--CCCcEEEEEEcCcCCEEEEEc----CCCcEEEEEcccccc--------ce-eEec
Confidence 12357778876432 1122221 122346788999988876543 235789999876311 11 1112
Q ss_pred cccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
..... . .|+++++.+++.+. .+.|..+|+.... ....+... ...+..+.+..++.+++....+ ..|++
T Consensus 176 ~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~~~~~---~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~--~~i~i 245 (289)
T cd00200 176 HTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDLSTGK---CLGTLRGH-ENGVNSVAFSPDGYLLASGSED--GTIRV 245 (289)
T ss_pred CccccceEEECCCcCEEEEecC----CCcEEEEECCCCc---eecchhhc-CCceEEEEEcCCCcEEEEEcCC--CcEEE
Confidence 12111 2 48888888877654 3468888886543 12222122 2233444444435666665544 36888
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
|++.+++....+......+..+.+++++..++
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 277 (289)
T cd00200 246 WDLRTGECVQTLSGHTNSVTSLAWSPDGKRLA 277 (289)
T ss_pred EEcCCceeEEEccccCCcEEEEEECCCCCEEE
Confidence 99876776666664445566777777655444
|
|
| >cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.3e-07 Score=93.78 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=79.4
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|++|++||..+... ..|...+ ..++.+.++.|+++|+++++... +..+. ..-...-+++...+++|.+..
T Consensus 33 ~~~~p~vilIHG~~~~~~-~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~--y~~a~--~~~~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGE-ESWISDLRKAYLSRGDYNVIVVDWGRGANPN--YPQAV--NNTRVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCCCcEEEEcCCCCCCC-CcHHHHHHHHHHhcCCCEEEEEECccccccC--hHHHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 345789999999765542 2333333 34666558999999999863221 11111 111122357777888888765
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
..+++++.++|||+||.+++.++.+.|+.++.++...|..
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 5678899999999999999999999999889998876643
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function | Back alignment and domain information |
|---|
Probab=98.49 E-value=1e-06 Score=90.61 Aligned_cols=211 Identities=17% Similarity=0.108 Sum_probs=83.1
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCC-CCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC--
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG-GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK-- 630 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG-~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~-- 630 (783)
+.-+||++-|=...-.+-.|.......|...||.++.+.++- -++||-. .-.++.+|+.++++||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~--------SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTS--------SLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcc--------hhhhHHHHHHHHHHHHHHhhcc
Confidence 345788886643333444466667777776799999999986 4556622 22356889999999999873
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCC-----CceeEEEEcCCcchhhhccccccc-ccc------hh---hhCCCCC--
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRP-----ELYGAALILVGALDMLRFNKFTIA-YYS------ES---EFGSPNN-- 693 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p-----~lf~a~i~~~~~~d~~~~~~~~~~-~~~------~~---~~g~p~~-- 693 (783)
....+||.|+|||=|..-++..+.... ....++|+++|+.|--........ ..+ .. +-|.+++
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 236789999999999999999887542 467999999999886433211000 000 00 0122111
Q ss_pred H-------------HHHHHHHhcCcc------------cCCCCCCCCCcCCcEEEEecCCCCCCCcHH-HHHHHHHHHhh
Q psy2521 694 K-------------THFHNLLSYSPL------------HNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEK 747 (783)
Q Consensus 694 ~-------------~~~~~~~~~sp~------------~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~~ 747 (783)
+ ..++++--.+|- ..++.--+.+..| +|++.+.+|.-||.+- -.++.++++.+
T Consensus 184 p~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~p-lLvl~Sg~DEyvP~~vdk~~Ll~rw~~a 262 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKP-LLVLYSGKDEYVPPWVDKEALLERWKAA 262 (303)
T ss_dssp ----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT------------------
T ss_pred eccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCc-eEEEecCCCceecccccccccccccccc
Confidence 0 001111111111 0000000014455 9999999999999874 46777777766
Q ss_pred hCCCCCCC-CcEEEEEeCCCCccCCccchhh
Q psy2521 748 IGSLPYQK-NPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 748 ~~~~~~~~-~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
.. .+ ..-.-.+.|||.|....+....
T Consensus 263 ~~----~~~~s~~S~iI~GA~H~~~~~~~~~ 289 (303)
T PF08538_consen 263 TN----PKIWSPLSGIIPGASHNVSGPSQAE 289 (303)
T ss_dssp -------------------------------
T ss_pred cc----ccccccccccccccccccccccccc
Confidence 21 11 1223557899999998665543
|
This family contains many hypothetical proteins. ; PDB: 2Q0X_B. |
| >KOG2112|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.1e-06 Score=82.51 Aligned_cols=181 Identities=19% Similarity=0.151 Sum_probs=112.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--C----CCCCCChhHHhhccccC-CcChHHHH---HHHHH
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--R----GGGELGEDWHNAGRLLK-KQNCFDDF---QAAAE 624 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--R----G~g~~G~~~~~~g~~~~-~~~~~~D~---~a~~~ 624 (783)
.-+||++||-...... |.. +..-+.-...-.++|+- | -+|..+..|.+...... ...+-..+ .+.+.
T Consensus 3 ~atIi~LHglGDsg~~--~~~-~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~ 79 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSG--WAQ-FLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIA 79 (206)
T ss_pred eEEEEEEecCCCCCcc--HHH-HHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHH
Confidence 3589999995443322 221 22224444666666632 2 24556667777533321 22222222 33344
Q ss_pred HHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHH
Q psy2521 625 YMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLL 701 (783)
Q Consensus 625 ~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 701 (783)
.|+++ ..+.++||+|.|.|+||.+++.++..+|....+++...++.--. ...+
T Consensus 80 ~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~--------------------~~~~---- 135 (206)
T KOG2112|consen 80 NLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRA--------------------SIGL---- 135 (206)
T ss_pred HHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccc--------------------hhhc----
Confidence 45443 34788999999999999999999998865444444444433100 0000
Q ss_pred hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 702 SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 702 ~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
.+... +.+++|++..||+.|+.||..-..+....|+.. +..++++.|++-+|.....+-..
T Consensus 136 -----~~~~~---~~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~-------~~~~~f~~y~g~~h~~~~~e~~~ 196 (206)
T KOG2112|consen 136 -----PGWLP---GVNYTPILLCHGTADPLVPFRFGEKSAQFLKSL-------GVRVTFKPYPGLGHSTSPQELDD 196 (206)
T ss_pred -----cCCcc---ccCcchhheecccCCceeehHHHHHHHHHHHHc-------CCceeeeecCCccccccHHHHHH
Confidence 11111 123446999999999999999999999999988 77799999999999876544333
|
|
| >COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.47 E-value=9.1e-07 Score=89.89 Aligned_cols=206 Identities=18% Similarity=0.150 Sum_probs=122.2
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc---CCEEEEEecCCCCCCCChhH
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH---FNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~---~G~~v~~~~~RG~g~~G~~~ 603 (783)
+.+++.+.=..+..+.++.|.++.+..++|+++..||-......+- ...+..++++ ..-+++.+|+----...+.+
T Consensus 70 ~~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~ 148 (299)
T COG2382 70 EEILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREEL 148 (299)
T ss_pred hhhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHh
Confidence 4444444333456677788888888899999999998533332211 1123344442 14567766654311111111
Q ss_pred HhhccccCCcChHHHHHH--HHHHHHHcC--CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 604 HNAGRLLKKQNCFDDFQA--AAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a--~~~~l~~~~--~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
+ ....+.++++ .+=++.+.- .-++++-+++|.|+||+.++.++.++|++|..+++++|.++..-....
T Consensus 149 ~-------~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~~~~- 220 (299)
T COG2382 149 H-------CNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPLDTQ- 220 (299)
T ss_pred c-------ccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCccccc-
Confidence 1 1111222222 122333321 246678899999999999999999999999999999998876432110
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
+ ..+..+.+. -++-+... .. -++...+..+....+. +.+++.|+.. |.++.
T Consensus 221 -----------~-~~~~~~~l~---~~~a~~~~----~~-~~l~~g~~~~~~~~pN--r~L~~~L~~~-------g~~~~ 271 (299)
T COG2382 221 -----------P-QGEVAESLK---ILHAIGTD----ER-IVLTTGGEEGDFLRPN--RALAAQLEKK-------GIPYY 271 (299)
T ss_pred -----------c-ccchhhhhh---hhhccCcc----ce-EEeecCCccccccchh--HHHHHHHHhc-------CCcce
Confidence 0 011111122 22333331 11 2666666666666554 5678999988 99999
Q ss_pred EEEeCCCCccCC
Q psy2521 760 LRVEQDAGHGQG 771 (783)
Q Consensus 760 l~~~~~~gHg~~ 771 (783)
++.|+| ||-..
T Consensus 272 yre~~G-gHdw~ 282 (299)
T COG2382 272 YREYPG-GHDWA 282 (299)
T ss_pred eeecCC-CCchh
Confidence 999998 99764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=0.00013 Score=78.96 Aligned_cols=241 Identities=14% Similarity=0.086 Sum_probs=118.4
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECC-CCccccc-cc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDYPE-VL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~-tg~~~~~-~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..+++||||++|+.+.... ..|.+++++ +|+.... .. .......++++|||+.||.+...
T Consensus 38 ~~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~------------- 100 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN------------- 100 (330)
T ss_pred ccEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC-------------
Confidence 4578999999886654322 357777775 4543211 11 11123578999999988766532
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc-eeee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL-KTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~-~~l~ 367 (783)
...|..+++.+.......+...+... .-..+.++|||+++++... ..+.|+++|+++. ..+...... ....
T Consensus 101 --~~~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~~p~g~~l~v~~~---~~~~v~v~d~~~~--g~l~~~~~~~~~~~ 172 (330)
T PRK11028 101 --ANCVSVSPLDKDGIPVAPIQIIEGLE-GCHSANIDPDNRTLWVPCL---KEDRIRLFTLSDD--GHLVAQEPAEVTTV 172 (330)
T ss_pred --CCeEEEEEECCCCCCCCceeeccCCC-cccEeEeCCCCCEEEEeeC---CCCEEEEEEECCC--CcccccCCCceecC
Confidence 23566666653221111121111111 1245678999999876543 2368999998751 111100000 1111
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC--CCCCCcEEe--ecCC---CCceEEEEEEeeCCEEEEEEecC
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKNWKTL--IPED---ENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~--~~~~~~~~l--i~~~---~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+.......|+|||+++|... ... ..|..++++. +....++.+ +|.. ..........++++++|+..+.
T Consensus 173 ~g~~p~~~~~~pdg~~lyv~~-~~~--~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~- 248 (330)
T PRK11028 173 EGAGPRHMVFHPNQQYAYCVN-ELN--SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRT- 248 (330)
T ss_pred CCCCCceEEECCCCCEEEEEe-cCC--CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCC-
Confidence 121222236899999888754 322 3466666652 221112222 1221 0111112233454566665322
Q ss_pred CeeEEEEEECCC-Cce---eeeecCCCeEEEeeeccccccEEEEEEe
Q psy2521 441 VRSVMDLHDLNT-GKR---LHSFPLDLGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 441 g~~~l~~~dl~~-G~~---~~~l~~~~g~v~~~s~~~d~~~l~~~~s 483 (783)
...|.+|+++. +.. +..+.... ....+..+++++.++.+..
T Consensus 249 -~~~I~v~~i~~~~~~~~~~~~~~~~~-~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 249 -ASLISVFSVSEDGSVLSFEGHQPTET-QPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred -CCeEEEEEEeCCCCeEEEeEEEeccc-cCCceEECCCCCEEEEEEc
Confidence 34566676632 322 12222111 1224566788888887653
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.3e-05 Score=82.40 Aligned_cols=218 Identities=15% Similarity=0.188 Sum_probs=108.6
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCC-Cccccc--cc------------cccccCeeEEeeCCCEEEEEEeec
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPE--VL------------KNVKFPSISWTHDHKGFFYNQYCD 276 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~~--~~------------~~~~~~~~~WspDg~~l~y~~~~~ 276 (783)
-.++++|||++|+.+--.+| .+.+++++. |..... .. .......+.|+|||+.+|....
T Consensus 90 ~~i~~~~~g~~l~vany~~g----~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl-- 163 (345)
T PF10282_consen 90 CHIAVDPDGRFLYVANYGGG----SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL-- 163 (345)
T ss_dssp EEEEECTTSSEEEEEETTTT----EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET--
T ss_pred EEEEEecCCCEEEEEEccCC----eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec--
Confidence 35789999998876543333 477777765 442211 01 1112246899999998875541
Q ss_pred CCCCCCCCcccccCCceEEEEEcCCCCCCc--eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 277 INGTADGTETTAHMGQKIYYHVLGTEQDKD--IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 277 ~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d--~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...+|+.++++....+- ......+.... -..+.++|||+++++.. +. .+.|.++++... .
T Consensus 164 -------------G~D~v~~~~~~~~~~~l~~~~~~~~~~G~G-PRh~~f~pdg~~~Yv~~-e~--s~~v~v~~~~~~-~ 225 (345)
T PF10282_consen 164 -------------GADRVYVYDIDDDTGKLTPVDSIKVPPGSG-PRHLAFSPDGKYAYVVN-EL--SNTVSVFDYDPS-D 225 (345)
T ss_dssp -------------TTTEEEEEEE-TTS-TEEEEEEEECSTTSS-EEEEEE-TTSSEEEEEE-TT--TTEEEEEEEETT-T
T ss_pred -------------CCCEEEEEEEeCCCceEEEeeccccccCCC-CcEEEEcCCcCEEEEec-CC--CCcEEEEeeccc-C
Confidence 23478888887654221 11112222111 13578999999987653 32 367777777621 1
Q ss_pred CcccCCCCceeeecCcc---ceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC
Q psy2521 355 GKISGKFPLKTVIPGMD---HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN 430 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~---~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g 430 (783)
..++.......+-.+.. .... .++|||++||+ +|++...-.++.+|..++... ....++.............+|
T Consensus 226 g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyv-snr~~~sI~vf~~d~~~g~l~-~~~~~~~~G~~Pr~~~~s~~g 303 (345)
T PF10282_consen 226 GSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYV-SNRGSNSISVFDLDPATGTLT-LVQTVPTGGKFPRHFAFSPDG 303 (345)
T ss_dssp TEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEE-EECTTTEEEEEEECTTTTTEE-EEEEEEESSSSEEEEEE-TTS
T ss_pred CceeEEEEeeeccccccccCCceeEEEecCCCEEEE-EeccCCEEEEEEEecCCCceE-EEEEEeCCCCCccEEEEeCCC
Confidence 11110000001111111 1112 58999987775 777644333444433433321 222333321223222233455
Q ss_pred CEEEEEEecCCeeEEEEEECCCCce
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
++|++.....+.-.++.+|.++|+.
T Consensus 304 ~~l~Va~~~s~~v~vf~~d~~tG~l 328 (345)
T PF10282_consen 304 RYLYVANQDSNTVSVFDIDPDTGKL 328 (345)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CEEEEEecCCCeEEEEEEeCCCCcE
Confidence 6777766666655666667767764
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.5e-06 Score=90.63 Aligned_cols=207 Identities=17% Similarity=0.263 Sum_probs=119.3
Q ss_pred EEEEEE-ecCcCCCCCccEEEEecCC-CCCccCCcC---cHHHHHHHHcCCEEEEEecCCCCC--CCChhHHhhccccCC
Q psy2521 540 PMYIIH-RVGALRNRRNPVIIYGYGG-YGVSVLPTF---SISRCMFLRHFNGIYAIPNIRGGG--ELGEDWHNAGRLLKK 612 (783)
Q Consensus 540 ~~~~~~-p~~~~~~~~~P~ll~~hGg-~~~~~~~~~---~~~~~~~l~~~G~~v~~~~~RG~g--~~G~~~~~~g~~~~~ 612 (783)
..|++. |.+.++ +.-|+|||.||| |.....|.. ...+..++. ..++++.||.... +.|..+
T Consensus 107 s~Wlvk~P~~~~p-k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~y--------- 174 (374)
T PF10340_consen 107 SYWLVKAPNRFKP-KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKY--------- 174 (374)
T ss_pred eEEEEeCCcccCC-CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcC---------
Confidence 356665 555433 345999999997 333443332 222345554 4589999998633 333222
Q ss_pred cChHHHHHHHHHHHH-HcCCCCCCcEEEEEeChhHHHHHHHHhcC-----CCceeEEEEcCCcchhhhccccc-------
Q psy2521 613 QNCFDDFQAAAEYMI-NKKYTKPKYITIMGGSNGGLLVGACLNQR-----PELYGAALILVGALDMLRFNKFT------- 679 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~-~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-----p~lf~a~i~~~~~~d~~~~~~~~------- 679 (783)
.....+.++..++|+ +.|. ++|.++|-|+||.|++.++..- .-.-+.+|+.+|-+++.....-.
T Consensus 175 PtQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n 251 (374)
T PF10340_consen 175 PTQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDN 251 (374)
T ss_pred chHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCcccccc
Confidence 233679999999999 5554 5899999999999998876421 12458999999988886211000
Q ss_pred -----cc----ccchhhh-CCCCCHHHHHHHHhcCcccCCCCC---C-C-C--CcCCcEEEEecCCCCCCCcHHHHHHHH
Q psy2521 680 -----IA----YYSESEF-GSPNNKTHFHNLLSYSPLHNIKVP---P-N-N--TQYPATLVLTGDHDDRVPPLHSYKFIA 742 (783)
Q Consensus 680 -----~~----~~~~~~~-g~p~~~~~~~~~~~~sp~~~v~~~---~-~-~--~~~P~~Li~~g~~D~~V~~~~~~~~~~ 742 (783)
.. ..|...| |+ .+++. .....|+.|+..+ + + + -.+ .++|+.|+++ |-..+..+|++
T Consensus 252 ~~~D~l~~~~~~~~~~~y~~~-~~~~~---~~~~~~~~n~~~n~d~~~W~~I~~~~-~vfVi~Ge~E--vfrddI~~~~~ 324 (374)
T PF10340_consen 252 EKRDMLSYKGLSMFGDAYIGN-NDPEN---DLNSLPFVNIEYNFDAEDWKDILKKY-SVFVIYGEDE--VFRDDILEWAK 324 (374)
T ss_pred ccccccchhhHHHHHHhhccc-ccccc---ccccCCccCcccCCChhHHHHhccCC-cEEEEECCcc--ccHHHHHHHHH
Confidence 00 0011111 11 00000 0112222222110 0 0 0 122 3999999976 55678999999
Q ss_pred HHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 743 TLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 743 ~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.+....+. .=+.+..+.+.+++.|-.
T Consensus 325 ~~~~~~~~--~~~~~~nv~~~~~G~Hi~ 350 (374)
T PF10340_consen 325 KLNDVKPN--KFSNSNNVYIDEGGIHIG 350 (374)
T ss_pred HHhhcCcc--ccCCcceEEEecCCcccc
Confidence 99866111 013356778888999964
|
In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved []. |
| >COG4757 Predicted alpha/beta hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.5e-06 Score=83.95 Aligned_cols=218 Identities=17% Similarity=0.103 Sum_probs=127.0
Q ss_pred EEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc
Q psy2521 529 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 608 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~ 608 (783)
+.++..||..+++..+. . +++.+-.+.+-|+++... .|...+..+++++||.|+..||||.|+.-..-...-.
T Consensus 8 ~~l~~~DG~~l~~~~~p-A----~~~~~g~~~va~a~Gv~~--~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQRFP-A----DGKASGRLVVAGATGVGQ--YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCcccccc-C----CCCCCCcEEecccCCcch--hHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 55778899999988763 2 345555556667777653 3556677888889999999999997654321111000
Q ss_pred ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc----------c
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK----------F 678 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~----------~ 678 (783)
-....-...||.++++++.+.- ....+..+|||+||.+.+.+. ++|..-+++|..++.- |...+. .
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gag-wsg~m~~~~~l~~~~l~ 156 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAG-WSGWMGLRERLGAVLLW 156 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeecccc-cCcccceeeEeccccc-cccchhhhhcccceeec
Confidence 0111223469999999998742 234689999999999976654 5563322333332211 111100 0
Q ss_pred cc----cccch-----hhhCCCC-C----HHHHHHHHhcCcccC----------CCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 679 TI----AYYSE-----SEFGSPN-N----KTHFHNLLSYSPLHN----------IKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 679 ~~----~~~~~-----~~~g~p~-~----~~~~~~~~~~sp~~~----------v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
.. -..|. ..+|.++ . ..+++.+-..--|.. +-. .+++| +..+....|+-+|+
T Consensus 157 ~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~ya---aVrtP-i~~~~~~DD~w~P~ 232 (281)
T COG4757 157 NLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYA---AVRTP-ITFSRALDDPWAPP 232 (281)
T ss_pred cccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHH---HhcCc-eeeeccCCCCcCCH
Confidence 00 00111 1123331 1 122222211111110 001 26778 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC----CccC
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDA----GHGQ 770 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~----gHg~ 770 (783)
....+|+....++ |++++.++.+ ||..
T Consensus 233 As~d~f~~~y~nA---------pl~~~~~~~~~~~lGH~g 263 (281)
T COG4757 233 ASRDAFASFYRNA---------PLEMRDLPRAEGPLGHMG 263 (281)
T ss_pred HHHHHHHHhhhcC---------cccceecCcccCcccchh
Confidence 9888888887765 7888887766 8863
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=98.46 E-value=0.00017 Score=76.30 Aligned_cols=268 Identities=13% Similarity=0.114 Sum_probs=144.3
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCC-CcEEEeeEEECCCCcEEEEEEecCCCceEEE
Q psy2521 159 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKD-GTTALKLYAFSDNGKHFAYCLSKSGSDWNTL 237 (783)
Q Consensus 159 ~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~-g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i 237 (783)
-+|.|...|++.||...-.+ --.||-.+ ||-+.+... ..+....-..+-|||+|+|+.. | .|
T Consensus 227 ~vS~PmIV~~RvYFlsD~eG--~GnlYSvd---------ldGkDlrrHTnFtdYY~R~~nsDGkrIvFq~~--G----dI 289 (668)
T COG4946 227 NVSSPMIVGERVYFLSDHEG--VGNLYSVD---------LDGKDLRRHTNFTDYYPRNANSDGKRIVFQNA--G----DI 289 (668)
T ss_pred CcCCceEEcceEEEEecccC--ccceEEec---------cCCchhhhcCCchhccccccCCCCcEEEEecC--C----cE
Confidence 46888888998888875443 23456433 343444332 1122333456889999999752 3 59
Q ss_pred EEEECCCCcccccccc--------------ccccC-eeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCC
Q psy2521 238 HIKDVDTGKDYPEVLK--------------NVKFP-SISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE 302 (783)
Q Consensus 238 ~v~Dl~tg~~~~~~~~--------------~~~~~-~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~ 302 (783)
|++|.++.....+.+. ..++- .++- -+|+.|++++.. +.++.+.-.+
T Consensus 290 ylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~-~~Gd~ia~VSRG-----------------kaFi~~~~~~ 351 (668)
T COG4946 290 YLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAV-VNGDYIALVSRG-----------------KAFIMRPWDG 351 (668)
T ss_pred EEeCCCcCcceeeecCCccccccccccccCHHHhhhhhcc-CCCcEEEEEecC-----------------cEEEECCCCC
Confidence 9999887654322221 01111 1222 267777777621 2222221111
Q ss_pred CCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE-EEEeeC
Q psy2521 303 QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNG 381 (783)
Q Consensus 303 ~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg 381 (783)
. +.+.+.... .-....+-|++-+++...+ ...|-++|..+|+ ...+..+...-.. ..++||
T Consensus 352 ~-----~iqv~~~~~-VrY~r~~~~~e~~vigt~d---gD~l~iyd~~~~e---------~kr~e~~lg~I~av~vs~dG 413 (668)
T COG4946 352 Y-----SIQVGKKGG-VRYRRIQVDPEGDVIGTND---GDKLGIYDKDGGE---------VKRIEKDLGNIEAVKVSPDG 413 (668)
T ss_pred e-----eEEcCCCCc-eEEEEEccCCcceEEeccC---CceEEEEecCCce---------EEEeeCCccceEEEEEcCCC
Confidence 0 011111011 1123345566655554333 2467778887752 1222222222222 488999
Q ss_pred CEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe--eEEEEEECCCCceeeee
Q psy2521 382 PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR--SVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 382 ~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~--~~l~~~dl~~G~~~~~l 459 (783)
+.+++ +|. ++.|+.+|++++. ..++...+...+..+.+.++.+.+...-.+|. ..|.++|..+|+. -.+
T Consensus 414 K~~vv-aNd---r~el~vididngn----v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki-y~v 484 (668)
T COG4946 414 KKVVV-AND---RFELWVIDIDNGN----VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI-YDV 484 (668)
T ss_pred cEEEE-EcC---ceEEEEEEecCCC----eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE-EEe
Confidence 87765 443 6889999999987 34555555556655555543444444444543 6799999965564 667
Q ss_pred cCCCeEEEeeeccccccEEEEEEecCCCC
Q psy2521 460 PLDLGQITHISGRRKYNEVFYGFTSFLQP 488 (783)
Q Consensus 460 ~~~~g~v~~~s~~~d~~~l~~~~ss~~~P 488 (783)
+.|.+.=.+++.++|++.+||...-...|
T Consensus 485 TT~ta~DfsPaFD~d~ryLYfLs~RsLdP 513 (668)
T COG4946 485 TTPTAYDFSPAFDPDGRYLYFLSARSLDP 513 (668)
T ss_pred cCCcccccCcccCCCCcEEEEEeccccCC
Confidence 77632222556678888887654433333
|
|
| >PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-06 Score=94.38 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=62.3
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC------hhHHhhc-------c------ccC-
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG------EDWHNAG-------R------LLK- 611 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G------~~~~~~g-------~------~~~- 611 (783)
.++.|+|||-||-.+.... |+. ...-|+.+||+|+++++|-+.... ..-.... . ...
T Consensus 97 ~~~~PvvIFSHGlgg~R~~--yS~-~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T PF03403_consen 97 PGKFPVVIFSHGLGGSRTS--YSA-ICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFD 173 (379)
T ss_dssp SS-EEEEEEE--TT--TTT--THH-HHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----
T ss_pred CCCCCEEEEeCCCCcchhh--HHH-HHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccccc
Confidence 3789999999998777654 444 344566789999999999654221 1100000 0 000
Q ss_pred CcC-----------hHHHHHHHHHHHHH--c------------------CCCCCCcEEEEEeChhHHHHHHHHhcCCCce
Q psy2521 612 KQN-----------CFDDFQAAAEYMIN--K------------------KYTKPKYITIMGGSNGGLLVGACLNQRPELY 660 (783)
Q Consensus 612 ~~~-----------~~~D~~a~~~~l~~--~------------------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf 660 (783)
... -..|+..+++.|.+ . +-+|.++|+++|||+||..++.++.+. ..|
T Consensus 174 ~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~ 252 (379)
T PF03403_consen 174 PEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRF 252 (379)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT-
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCc
Confidence 000 13566667777653 1 335678999999999999999998875 578
Q ss_pred eEEEEcCC
Q psy2521 661 GAALILVG 668 (783)
Q Consensus 661 ~a~i~~~~ 668 (783)
+++|+.-|
T Consensus 253 ~~~I~LD~ 260 (379)
T PF03403_consen 253 KAGILLDP 260 (379)
T ss_dssp -EEEEES-
T ss_pred ceEEEeCC
Confidence 99886544
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.44 E-value=5.9e-05 Score=82.25 Aligned_cols=250 Identities=15% Similarity=0.160 Sum_probs=119.3
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
....+||||+++.. .+.+| .|.++|+.+++.+.....+....++++|+||++++.+...+
T Consensus 40 ~~~~~s~Dgr~~yv-~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~--------------- 99 (369)
T PF02239_consen 40 AGLKFSPDGRYLYV-ANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEP--------------- 99 (369)
T ss_dssp EEEE-TT-SSEEEE-EETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEET---------------
T ss_pred eEEEecCCCCEEEE-EcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCC---------------
Confidence 44679999998554 45433 59999999998765443333346899999999887666432
Q ss_pred ceEEEEEcCCCCCCcee-EEecC---CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 292 QKIYYHVLGTEQDKDIP-VVEFP---NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~-v~~~~---~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..+..++..+-..-..+ +-..+ ..+ ...++.-||++...++... +..+||++|.... ..+ ....+-
T Consensus 100 ~~v~v~D~~tle~v~~I~~~~~~~~~~~~-Rv~aIv~s~~~~~fVv~lk---d~~~I~vVdy~d~--~~~----~~~~i~ 169 (369)
T PF02239_consen 100 GTVSVIDAETLEPVKTIPTGGMPVDGPES-RVAAIVASPGRPEFVVNLK---DTGEIWVVDYSDP--KNL----KVTTIK 169 (369)
T ss_dssp TEEEEEETTT--EEEEEE--EE-TTTS----EEEEEE-SSSSEEEEEET---TTTEEEEEETTTS--SCE----EEEEEE
T ss_pred CceeEeccccccceeecccccccccccCC-CceeEEecCCCCEEEEEEc---cCCeEEEEEeccc--ccc----ceeeec
Confidence 35656655443211000 00000 111 2245666888886665543 3479999998762 110 011111
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCC---------------------CC---cE---------Eee
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE---------------------KN---WK---------TLI 414 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~---------------------~~---~~---------~li 414 (783)
.+....-..|+|+|++++...+.. .+|..+|..+... .. |. .++
T Consensus 170 ~g~~~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~i 246 (369)
T PF02239_consen 170 VGRFPHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLI 246 (369)
T ss_dssp --TTEEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEE
T ss_pred ccccccccccCcccceeeeccccc---ceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccc
Confidence 111111125899988887654321 1233333222110 00 10 011
Q ss_pred cCC--------CCceEEEE----------EEeeCCEEEEE-EecCCeeEEEEEECCCCceeeeecCCCe-EEEeeecccc
Q psy2521 415 PED--------ENRTLDVV----------AAVANNKLIVH-YIQNVRSVMDLHDLNTGKRLHSFPLDLG-QITHISGRRK 474 (783)
Q Consensus 415 ~~~--------~~~~l~~~----------~~~~g~~l~~~-~~~~g~~~l~~~dl~~G~~~~~l~~~~g-~v~~~s~~~d 474 (783)
... .+.++..+ ..++++++++. ........|.++|.++-+....|....+ .+..+..+++
T Consensus 247 g~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~d 326 (369)
T PF02239_consen 247 GTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPD 326 (369)
T ss_dssp E--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TT
T ss_pred cCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCC
Confidence 110 11122222 22333344443 1112246788888866655555543222 2457788999
Q ss_pred ccEEEEEEecCCCCceEEEEeC
Q psy2521 475 YNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 475 ~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++++++.-.- -.++..||.
T Consensus 327 G~~v~vS~~~~--~~~i~v~D~ 346 (369)
T PF02239_consen 327 GKEVWVSVWDG--NGAIVVYDA 346 (369)
T ss_dssp SSEEEEEEE----TTEEEEEET
T ss_pred CCEEEEEEecC--CCEEEEEEC
Confidence 99999865543 338999998
|
... |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=0.00011 Score=83.08 Aligned_cols=209 Identities=10% Similarity=0.027 Sum_probs=115.3
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccc-----c-ccc--cccccCeeEEeeCCCEEEEEEeecCCC
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-----P-EVL--KNVKFPSISWTHDHKGFFYNQYCDING 279 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-----~-~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~ 279 (783)
-.+..++||| |+++||-+.. ..+|++||+.++... + .++ .......+.|+|++..++.+...
T Consensus 76 ~~V~~v~fsP~d~~~LaSgS~-----DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~---- 146 (493)
T PTZ00421 76 GPIIDVAFNPFDPQKLFTASE-----DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA---- 146 (493)
T ss_pred CCEEEEEEcCCCCCEEEEEeC-----CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC----
Confidence 4588899999 8888775532 357999999765321 0 111 12233578999997655555522
Q ss_pred CCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC
Q psy2521 280 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 359 (783)
Q Consensus 280 ~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~ 359 (783)
...|.+|++.+.. ....+.. .......+.|+|||+.|+... ....|.++|+.++.
T Consensus 147 -----------DgtVrIWDl~tg~--~~~~l~~--h~~~V~sla~spdG~lLatgs----~Dg~IrIwD~rsg~------ 201 (493)
T PTZ00421 147 -----------DMVVNVWDVERGK--AVEVIKC--HSDQITSLEWNLDGSLLCTTS----KDKKLNIIDPRDGT------ 201 (493)
T ss_pred -----------CCEEEEEECCCCe--EEEEEcC--CCCceEEEEEECCCCEEEEec----CCCEEEEEECCCCc------
Confidence 2368888987653 2222322 223456899999999887442 23689999998741
Q ss_pred CCCceeeecCccc--eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEE
Q psy2521 360 KFPLKTVIPGMDH--HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 360 ~~~~~~l~~~~~~--~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~ 437 (783)
....+...... ....|.++++.++...........|..+|+..... ................++..+++.|++..
T Consensus 202 --~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~-p~~~~~~d~~~~~~~~~~d~d~~~L~lgg 278 (493)
T PTZ00421 202 --IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS-PYSTVDLDQSSALFIPFFDEDTNLLYIGS 278 (493)
T ss_pred --EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC-ceeEeccCCCCceEEEEEcCCCCEEEEEE
Confidence 11112111111 12257777776654332222345688888865431 11211111111222223334434555544
Q ss_pred ecCCeeEEEEEECCCCcee
Q psy2521 438 IQNVRSVMDLHDLNTGKRL 456 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G~~~ 456 (783)
..+ ..|++||+.+++..
T Consensus 279 kgD--g~Iriwdl~~~~~~ 295 (493)
T PTZ00421 279 KGE--GNIRCFELMNERLT 295 (493)
T ss_pred eCC--CeEEEEEeeCCceE
Confidence 334 46888998766643
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.1e-05 Score=77.75 Aligned_cols=102 Identities=20% Similarity=0.285 Sum_probs=68.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+..++|||+|+++|..... -...+.++|+++.... ++.......+.|||+|+.|+...... .
T Consensus 62 I~~~~WsP~g~~favi~g~---~~~~v~lyd~~~~~i~--~~~~~~~n~i~wsP~G~~l~~~g~~n-------------~ 123 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGS---MPAKVTLYDVKGKKIF--SFGTQPRNTISWSPDGRFLVLAGFGN-------------L 123 (194)
T ss_pred eEEEEECcCCCEEEEEEcc---CCcccEEEcCcccEeE--eecCCCceEEEECCCCCEEEEEEccC-------------C
Confidence 8899999999999877532 1237899999733322 22222235799999999999887532 2
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
...|.++++.+. ..+..... . ....+.||||||+++....
T Consensus 124 ~G~l~~wd~~~~----~~i~~~~~-~-~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 124 NGDLEFWDVRKK----KKISTFEH-S-DATDVEWSPDGRYLATATT 163 (194)
T ss_pred CcEEEEEECCCC----EEeecccc-C-cEEEEEEcCCCCEEEEEEe
Confidence 245778887632 23333222 2 2467899999999987654
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.9e-05 Score=85.13 Aligned_cols=230 Identities=16% Similarity=0.112 Sum_probs=133.5
Q ss_pred CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEEC-CCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 207 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV-DTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 207 g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl-~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
....+..++|||||++|+=+ ++..+|++||+ +.+..+... -.......++|+|+|+.|+-.+.|
T Consensus 202 h~~~v~~~~fs~d~~~l~s~-----s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D--------- 267 (456)
T KOG0266|consen 202 HTRGVSDVAFSPDGSYLLSG-----SDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDD--------- 267 (456)
T ss_pred cccceeeeEECCCCcEEEEe-----cCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCC---------
Confidence 45678999999999966633 34478999999 444443211 112223689999999655544432
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
..|++|++.++. -...+.... .....+.+++||++|+-.+ ....|.++|+.++... ...
T Consensus 268 -------~tvriWd~~~~~--~~~~l~~hs--~~is~~~f~~d~~~l~s~s----~d~~i~vwd~~~~~~~------~~~ 326 (456)
T KOG0266|consen 268 -------GTVRIWDVRTGE--CVRKLKGHS--DGISGLAFSPDGNLLVSAS----YDGTIRVWDLETGSKL------CLK 326 (456)
T ss_pred -------CcEEEEeccCCe--EEEeeeccC--CceEEEEECCCCCEEEEcC----CCccEEEEECCCCcee------eee
Confidence 358888888742 222333322 2456789999999997542 2368999999885200 001
Q ss_pred eeecCccc--eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC-ceEEEEEEeeCCEEEEEEecC
Q psy2521 365 TVIPGMDH--HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 365 ~l~~~~~~--~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~-~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+...... ... .|+|+|+.|+..+. +..|-.+++..+. .......+... ..+.......++.+++....+
T Consensus 327 ~~~~~~~~~~~~~~~fsp~~~~ll~~~~----d~~~~~w~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d 400 (456)
T KOG0266|consen 327 LLSGAENSAPVTSVQFSPNGKYLLSASL----DRTLKLWDLRSGK--SVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSED 400 (456)
T ss_pred cccCCCCCCceeEEEECCCCcEEEEecC----CCeEEEEEccCCc--ceeeecccCCcceeEecccccCCCCeEEEEeCC
Confidence 11111111 122 58899988876543 2346667776543 12333333322 122222223335666666666
Q ss_pred CeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEE
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVF 479 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~ 479 (783)
+ .|++|++.++..+..+... ...+...++.+....+.
T Consensus 401 ~--~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~ 438 (456)
T KOG0266|consen 401 G--SVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIA 438 (456)
T ss_pred c--eEEEEeCCccchhhhhcCCCCCceeccccCCCcCeee
Confidence 3 6889999777766666655 45555556666554444
|
|
| >PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic | Back alignment and domain information |
|---|
Probab=98.38 E-value=8.9e-06 Score=78.35 Aligned_cols=155 Identities=19% Similarity=0.161 Sum_probs=89.7
Q ss_pred EEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcE
Q psy2521 558 IIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYI 637 (783)
Q Consensus 558 ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri 637 (783)
|+.+||-.+ +....|.+-+..-+... +.|-.+|.- . -..++-...++.-+.. ++ +.+
T Consensus 1 v~IvhG~~~-s~~~HW~~wl~~~l~~~-~~V~~~~~~----------~--------P~~~~W~~~l~~~i~~--~~-~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGG-SPPDHWQPWLERQLENS-VRVEQPDWD----------N--------PDLDEWVQALDQAIDA--ID-EPT 57 (171)
T ss_dssp EEEE--TTS-STTTSTHHHHHHHHTTS-EEEEEC--T----------S----------HHHHHHHHHHCCHC---T-TTE
T ss_pred CEEeCCCCC-CCccHHHHHHHHhCCCC-eEEeccccC----------C--------CCHHHHHHHHHHHHhh--cC-CCe
Confidence 355565433 33356777666667654 777666551 0 1122333333322222 33 459
Q ss_pred EEEEeChhHHHHHHHH-hcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC
Q psy2521 638 TIMGGSNGGLLVGACL-NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT 716 (783)
Q Consensus 638 ~i~G~S~GG~l~~~~~-~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~ 716 (783)
.++|||.|+.+++..+ .+.....+++++.+|+..-.... ...+ +..+.+..... .
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~-------~~~~------------~~~f~~~p~~~-----l 113 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP-------FPPE------------LDGFTPLPRDP-----L 113 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC-------CTCG------------GCCCTTSHCCH-----H
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc-------hhhh------------ccccccCcccc-----c
Confidence 9999999999999999 77778899999999975310000 0000 11112221111 3
Q ss_pred cCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 717 QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 717 ~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
..| .+++.+++|+.||+..+.+++++|.+. +...+++||....
T Consensus 114 ~~~-~~viaS~nDp~vp~~~a~~~A~~l~a~------------~~~~~~~GHf~~~ 156 (171)
T PF06821_consen 114 PFP-SIVIASDNDPYVPFERAQRLAQRLGAE------------LIILGGGGHFNAA 156 (171)
T ss_dssp HCC-EEEEEETTBSSS-HHHHHHHHHHHT-E------------EEEETS-TTSSGG
T ss_pred CCC-eEEEEcCCCCccCHHHHHHHHHHcCCC------------eEECCCCCCcccc
Confidence 455 588999999999999999999999654 7888999997643
|
The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A. |
| >PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3 | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.8e-06 Score=83.85 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=98.7
Q ss_pred CCCCCCeEEEEEEECC----CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCC
Q psy2521 519 FEPTLFQTKQVYFRSK----DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR 594 (783)
Q Consensus 519 ~~~~~~~~~~~~~~s~----dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~R 594 (783)
|+...|.++.+.+.+. ---..|..|+.|.. .+.+|+|++.||-+-. .+|....++.++..||+|+.++.-
T Consensus 9 F~~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~---~G~yPVilF~HG~~l~---ns~Ys~lL~HIASHGfIVVAPQl~ 82 (307)
T PF07224_consen 9 FETGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSE---AGTYPVILFLHGFNLY---NSFYSQLLAHIASHGFIVVAPQLY 82 (307)
T ss_pred eecCCceeEEEeecCCCCCCCCCCCCeEEecCCc---CCCccEEEEeechhhh---hHHHHHHHHHHhhcCeEEEechhh
Confidence 5556666666666322 22457888998876 6899999999997554 235556677788899999999986
Q ss_pred CCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc--------CCCCCCcEEEEEeChhHHHHHHHHhcC-CC-ceeEEE
Q psy2521 595 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK--------KYTKPKYITIMGGSNGGLLVGACLNQR-PE-LYGAAL 664 (783)
Q Consensus 595 G~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~--------~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~-lf~a~i 664 (783)
... + ..+..++++...+++||-+. --.+..|+++.|||-||-.+.+++..+ .+ -|.|+|
T Consensus 83 ~~~--~---------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLI 151 (307)
T PF07224_consen 83 TLF--P---------PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALI 151 (307)
T ss_pred ccc--C---------CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhhee
Confidence 521 1 23445678888999999653 124668999999999999999988765 33 478888
Q ss_pred EcCCcchh
Q psy2521 665 ILVGALDM 672 (783)
Q Consensus 665 ~~~~~~d~ 672 (783)
..-|+.-+
T Consensus 152 GiDPV~G~ 159 (307)
T PF07224_consen 152 GIDPVAGT 159 (307)
T ss_pred cccccCCC
Confidence 77776533
|
1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.7e-05 Score=89.53 Aligned_cols=172 Identities=12% Similarity=0.093 Sum_probs=103.1
Q ss_pred EEeeEEECCCCcEEEEEEec---CCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSK---SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~---~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..+++||||+++||.... .++....||+.+. +|...+.+.... .+.++|+|||+.|+|......- ....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~-~t~PsWspDG~~lw~v~dg~~~----~~v~ 424 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHS-LTRPSWSLDADAVWVVVDGNTV----VRVI 424 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCC-CCCceECCCCCceEEEecCcce----EEEe
Confidence 46789999999999999842 1223568999997 444455444433 5799999999999998722100 0000
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEE---EECCCCCCCcccCCCCc
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHY---FDLHSLPDGKISGKFPL 363 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~---~dl~~g~~~~l~~~~~~ 363 (783)
......++|.+.+..+... . ..+. -...+.|||||++|++... .+|++ ....+|. ..+ ...
T Consensus 425 ~~~~~gql~~~~vd~ge~~--~--~~~g---~Issl~wSpDG~RiA~i~~-----g~v~Va~Vvr~~~G~-~~l---~~~ 488 (591)
T PRK13616 425 RDPATGQLARTPVDASAVA--S--RVPG---PISELQLSRDGVRAAMIIG-----GKVYLAVVEQTEDGQ-YAL---TNP 488 (591)
T ss_pred ccCCCceEEEEeccCchhh--h--ccCC---CcCeEEECCCCCEEEEEEC-----CEEEEEEEEeCCCCc-eee---ccc
Confidence 0112346777777654322 1 1111 2357899999999999862 37887 5544442 111 122
Q ss_pred eeeecCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 364 KTVIPGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 364 ~~l~~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
+.+....... .. .|..++. |++.++ ..+..++.+++++..
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~-L~V~~~--~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDS-LVVGRS--DPEHPVWYVNLDGSN 530 (591)
T ss_pred EEeecccCCccccceEecCCE-EEEEec--CCCCceEEEecCCcc
Confidence 3343333221 12 4887765 666654 344568999998754
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=0.00012 Score=78.85 Aligned_cols=297 Identities=19% Similarity=0.231 Sum_probs=154.9
Q ss_pred CccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCC----eEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEe-----
Q psy2521 158 EKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGS----TEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS----- 228 (783)
Q Consensus 158 ~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~----~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~----- 228 (783)
+.+-.++|.|.|++-.+.+| -.|| +|+ .+.+..|+ +..+.|||..+||+--..
T Consensus 213 etyv~wSP~GTYL~t~Hk~G----I~lW-----GG~~f~r~~RF~Hp~---------Vq~idfSP~EkYLVT~s~~p~~~ 274 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG----IALW-----GGESFDRIQRFYHPG---------VQFIDFSPNEKYLVTYSPEPIIV 274 (698)
T ss_pred eeeEEecCCceEEEEEeccc----eeee-----cCccHHHHHhccCCC---------ceeeecCCccceEEEecCCcccc
Confidence 35667889999888777665 3445 222 12233332 566788999998763321
Q ss_pred -cCCCceEEEEEEECCCCcccccc-c---cccccCeeEEeeCCCEEEEEEeecCCCCC--------------CCCccccc
Q psy2521 229 -KSGSDWNTLHIKDVDTGKDYPEV-L---KNVKFPSISWTHDHKGFFYNQYCDINGTA--------------DGTETTAH 289 (783)
Q Consensus 229 -~~G~d~~~i~v~Dl~tg~~~~~~-~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~--------------~g~~~~~~ 289 (783)
.+..|-.+|.|||+.||.....- . .-....-+.||-|+|.++-...+...--+ .|...=++
T Consensus 275 ~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~Fsw 354 (698)
T KOG2314|consen 275 EEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSW 354 (698)
T ss_pred CcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCccc
Confidence 12234468999999999754311 1 11122467888888876644321110000 01000000
Q ss_pred --CCceEEEEEcCCCC-CCceeEEecCCCCe------e---EEEEEEecCCcEEEEEEecCCCC------cEEEEEECCC
Q psy2521 290 --MGQKIYYHVLGTEQ-DKDIPVVEFPNGRS------L---GLHSEVTDCGRYLLVSTSNNTQG------SDLHYFDLHS 351 (783)
Q Consensus 290 --~~~~v~~~~lgt~~-~~d~~v~~~~~~~~------~---~~~~~~SpDGk~l~~~~~~~~~~------~~l~~~dl~~ 351 (783)
...-|-++.-.+.+ ...+.+.+.|.... + .....|-..|.||.+...+.+.. +.+-+..+..
T Consensus 355 sP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrire 434 (698)
T KOG2314|consen 355 SPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIRE 434 (698)
T ss_pred CCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeec
Confidence 11123333222221 11222333332111 1 13567999999999987663321 2333333333
Q ss_pred CCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCC-CCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEe
Q psy2521 352 LPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKN-APKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAV 428 (783)
Q Consensus 352 g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~-~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~ 428 (783)
.+.|.. .+.-.+.-.. .|.|.|+++.+++... ..+-+.|.+...... +. ++..-+ ...-.-++++
T Consensus 435 -------KdIpve-~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~---~~-lVk~~dk~~~N~vfwsP 502 (698)
T KOG2314|consen 435 -------KDIPVE-VVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK---PS-LVKELDKKFANTVFWSP 502 (698)
T ss_pred -------cCCCce-eeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc---hh-hhhhhcccccceEEEcC
Confidence 123322 1211122233 4999999999887554 345567777654433 32 222222 2223446777
Q ss_pred eCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecC
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSF 485 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~ 485 (783)
.|+.+++.......+.|..+|.. -.....+..+ ....+.+.|+|.|..+.-+.+++
T Consensus 503 kG~fvvva~l~s~~g~l~F~D~~-~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 503 KGRFVVVAALVSRRGDLEFYDTD-YADLKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred CCcEEEEEEecccccceEEEecc-hhhhhhccCccccccccceECCCCCEEEEeeehh
Confidence 87888888887777889999983 2122333333 23345677888887666554444
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.9e-05 Score=83.83 Aligned_cols=197 Identities=15% Similarity=0.198 Sum_probs=103.0
Q ss_pred CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECC-CCcEEEEEEecCCCce--EEEEEEECCCCccccc--cccc
Q psy2521 180 NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSD-NGKHFAYCLSKSGSDW--NTLHIKDVDTGKDYPE--VLKN 254 (783)
Q Consensus 180 ~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SP-DG~~la~~~~~~G~d~--~~i~v~Dl~tg~~~~~--~~~~ 254 (783)
....|++.+..+|+.+++++.+.+ ++.+.+|| |...|+|.-. +.-+. ..||+++.+++...+. ....
T Consensus 166 p~~~i~~idl~tG~~~~v~~~~~w-------lgH~~fsP~dp~li~fCHE-Gpw~~Vd~RiW~i~~dg~~~~~v~~~~~~ 237 (386)
T PF14583_consen 166 PHCRIFTIDLKTGERKVVFEDTDW-------LGHVQFSPTDPTLIMFCHE-GPWDLVDQRIWTINTDGSNVKKVHRRMEG 237 (386)
T ss_dssp --EEEEEEETTT--EEEEEEESS--------EEEEEEETTEEEEEEEEE--S-TTTSS-SEEEEETTS---EESS---TT
T ss_pred CCceEEEEECCCCceeEEEecCcc-------ccCcccCCCCCCEEEEecc-CCcceeceEEEEEEcCCCcceeeecCCCC
Confidence 356788888778999999987765 78899998 6677777643 33333 3799999888764332 2223
Q ss_pred cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy2521 255 VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 334 (783)
Q Consensus 255 ~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~ 334 (783)
...+.--|+|||+.|+|...... ....-|+..++.+.. ...+.+.|. ...+..|+||+.++--
T Consensus 238 e~~gHEfw~~DG~~i~y~~~~~~-----------~~~~~i~~~d~~t~~--~~~~~~~p~----~~H~~ss~Dg~L~vGD 300 (386)
T PF14583_consen 238 ESVGHEFWVPDGSTIWYDSYTPG-----------GQDFWIAGYDPDTGE--RRRLMEMPW----CSHFMSSPDGKLFVGD 300 (386)
T ss_dssp EEEEEEEE-TTSS-EEEEEEETT-----------T--EEEEEE-TTT----EEEEEEE-S----EEEEEE-TTSSEEEEE
T ss_pred cccccccccCCCCEEEEEeecCC-----------CCceEEEeeCCCCCC--ceEEEeCCc----eeeeEEcCCCCEEEec
Confidence 33467789999999999875321 223356677776653 334554432 3456678999987643
Q ss_pred EecCC------------CCcEEEEEECCCCCCCccc-CCCCceeeecCccc---eeEEEEeeCCEEEEEECCCCCCceEE
Q psy2521 335 TSNNT------------QGSDLHYFDLHSLPDGKIS-GKFPLKTVIPGMDH---HHEIIANNGPELIVKTTKNAPKGKVV 398 (783)
Q Consensus 335 ~~~~~------------~~~~l~~~dl~~g~~~~l~-~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~t~~~~~~~~L~ 398 (783)
..... ...-||++++..+....+. ....|. +..+... -...|||||++++|.+|..+.. .||
T Consensus 301 G~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~-v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~-~vY 378 (386)
T PF14583_consen 301 GGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWK-VLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPP-AVY 378 (386)
T ss_dssp E-------------------EEEEEETTTTEEEEEEE--------BTTBSSTT----EE-TTSSEEEEEE-TTSS--EEE
T ss_pred CCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcce-eecCCCccCCCCCccCCCCCEEEEECCCCCCc-cEE
Confidence 32110 0135777888763110000 001111 1111111 1226999999999999997764 599
Q ss_pred EEcCC
Q psy2521 399 TINLN 403 (783)
Q Consensus 399 ~~d~~ 403 (783)
.+++.
T Consensus 379 ~v~i~ 383 (386)
T PF14583_consen 379 LVEIP 383 (386)
T ss_dssp EEE--
T ss_pred EEeCc
Confidence 99874
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=98.30 E-value=0.0006 Score=74.15 Aligned_cols=267 Identities=17% Similarity=0.181 Sum_probs=130.1
Q ss_pred EeeEEECCCCcEEEEEEecCC--CceEEEEEEECCCCcccccc---ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSG--SDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G--~d~~~i~v~Dl~tg~~~~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
-+.+++||++++| |+....+ ...-..+-++-++|+..... ..+.....++.+||++.|+...+.
T Consensus 39 Ps~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~---------- 107 (345)
T PF10282_consen 39 PSWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG---------- 107 (345)
T ss_dssp ECCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT----------
T ss_pred CceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc----------
Confidence 3568899999866 5555542 22233444444445543221 122222457788999988776632
Q ss_pred ccccCCceEEEEEcCCCCCCcee--EEe----cCC----CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIP--VVE----FPN----GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~--v~~----~~~----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~ 355 (783)
...|..+++.....-... ++. .+. ....-..+.++|||+++++.. .+ ...|++++++.. ..
T Consensus 108 -----~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~d-lG--~D~v~~~~~~~~-~~ 178 (345)
T PF10282_consen 108 -----GGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPD-LG--ADRVYVYDIDDD-TG 178 (345)
T ss_dssp -----TTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEE-TT--TTEEEEEEE-TT-S-
T ss_pred -----CCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEe-cC--CCEEEEEEEeCC-Cc
Confidence 224556666543111111 111 111 112345788999999997653 32 358888888762 11
Q ss_pred cccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCC--CCCCCCcEE--eecCCC-Cc-eEEEEE-Ee
Q psy2521 356 KISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKT--LIPEDE-NR-TLDVVA-AV 428 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~--~~~~~~~~~--li~~~~-~~-~l~~~~-~~ 428 (783)
.+.. .....+..+.....-.|+|||+.+|+..... ..|..++++ .+....++. .++... .. ....+. ..
T Consensus 179 ~l~~-~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s---~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~isp 254 (345)
T PF10282_consen 179 KLTP-VDSIKVPPGSGPRHLAFSPDGKYAYVVNELS---NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISP 254 (345)
T ss_dssp TEEE-EEEEECSTTSSEEEEEE-TTSSEEEEEETTT---TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-T
T ss_pred eEEE-eeccccccCCCCcEEEEcCCcCEEEEecCCC---CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEec
Confidence 1211 0011111222222336999999999876542 345555554 332111222 222211 11 223333 34
Q ss_pred eCCEEEEEEecCCeeEEEEEEC--CCCce--eeeecCCCeE-EEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCC
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDL--NTGKR--LHSFPLDLGQ-ITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQ 503 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl--~~G~~--~~~l~~~~g~-v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~t 503 (783)
++++||++.+.. ..|.++++ .+|+. +..++.. |. -..+..+++++.+++.-..-. --.+|++|. ++
T Consensus 255 dg~~lyvsnr~~--~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~s~-~v~vf~~d~-----~t 325 (345)
T PF10282_consen 255 DGRFLYVSNRGS--NSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQDSN-TVSVFDIDP-----DT 325 (345)
T ss_dssp TSSEEEEEECTT--TEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETTTT-EEEEEEEET-----TT
T ss_pred CCCEEEEEeccC--CEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecCCC-eEEEEEEeC-----CC
Confidence 556677665544 45666665 44553 1222221 21 345667888888887654433 245667776 57
Q ss_pred CCCceEEEe
Q psy2521 504 DDFKPTIFR 512 (783)
Q Consensus 504 g~~~~~~~~ 512 (783)
| .++...
T Consensus 326 G--~l~~~~ 332 (345)
T PF10282_consen 326 G--KLTPVG 332 (345)
T ss_dssp T--EEEEEE
T ss_pred C--cEEEec
Confidence 7 554443
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=0.00049 Score=67.28 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=126.1
Q ss_pred EEeCCCCcCCC------C-cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCE
Q psy2521 196 VFLDPNKLSKD------G-TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKG 268 (783)
Q Consensus 196 ~llD~n~~~~~------g-~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~ 268 (783)
.|+|.|.-.+. + +-.+..+.|--||+++.- |+|..+++|||+..-.....-....-...+.-.|+-..
T Consensus 64 RlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyT-----gseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQte 138 (311)
T KOG0315|consen 64 RLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYT-----GSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTE 138 (311)
T ss_pred EEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEe-----cCCCceEEEEeccCcccchhccCCCCcceEEecCCcce
Confidence 56776655442 1 234677889999998853 55667899999977333222212222345666666544
Q ss_pred EEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE
Q psy2521 269 FFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 269 l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d 348 (783)
|+... ....|+.|+|++..-...++ |+......++.+.|||++++-..+. ...|+++
T Consensus 139 Lis~d----------------qsg~irvWDl~~~~c~~~li---Pe~~~~i~sl~v~~dgsml~a~nnk----G~cyvW~ 195 (311)
T KOG0315|consen 139 LISGD----------------QSGNIRVWDLGENSCTHELI---PEDDTSIQSLTVMPDGSMLAAANNK----GNCYVWR 195 (311)
T ss_pred EEeec----------------CCCcEEEEEccCCccccccC---CCCCcceeeEEEcCCCcEEEEecCC----ccEEEEE
Confidence 44332 23468999999875443333 2222355688999999999865433 5788888
Q ss_pred CCCCCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA 427 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~ 427 (783)
+-++. ..++-.|..++......... .+|||+++|.-.+.. ..+..++.++- -..+..+.....-+-.-.++
T Consensus 196 l~~~~--~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssd----ktv~iwn~~~~--~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 196 LLNHQ--TASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSD----KTVKIWNTDDF--FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ccCCC--ccccceEhhheecccceEEEEEECCCCcEEEeecCC----ceEEEEecCCc--eeeEEEeecCCceEEeeeec
Confidence 86631 11111222222222222222 699999988754432 12444444332 11233333332333334455
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCCceeeeecC
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 461 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~ 461 (783)
.+ +..+++...+ ..+.+|++..|+.++.-..
T Consensus 268 ~d-g~YlvTassd--~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 268 AD-GEYLVTASSD--HTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred cC-ccEEEecCCC--CceeecccccCceeeecCC
Confidence 55 4444555555 4567788888887665543
|
|
| >PRK07868 acyl-CoA synthetase; Validated | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-05 Score=99.40 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=64.0
Q ss_pred CccEEEEecCCCCCccCCcCcH--HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHH----HHHHHHHH
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDF----QAAAEYMI 627 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~----~a~~~~l~ 627 (783)
..|.||++||.......+...+ ++..+|.++||.|+++|+.. .++ ..+. . ...+.|. .++++.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~---~~~---~~~~--~-~~~l~~~i~~l~~~l~~v~ 136 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGS---PDK---VEGG--M-ERNLADHVVALSEAIDTVK 136 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCC---CCh---hHcC--c-cCCHHHHHHHHHHHHHHHH
Confidence 4588999999876665544332 23466666799999999632 111 1110 0 1223333 34444443
Q ss_pred HcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCcch
Q psy2521 628 NKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALD 671 (783)
Q Consensus 628 ~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~~d 671 (783)
+.. .+++.++|+|+||.++..++..+ |+..+.+|..+..+|
T Consensus 137 ~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 137 DVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred Hhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 332 24799999999999998777644 557788776444433
|
|
| >COG4188 Predicted dienelactone hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.8e-06 Score=88.03 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=90.0
Q ss_pred EEEEEEECC-CCcEEEEEEEEecCcC---CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 526 TKQVYFRSK-DGTRVPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 526 ~~~~~~~s~-dg~~v~~~~~~p~~~~---~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
...+++... .+.+++..++.|.... ...+.|+|++.||....... |.. ....+++.||+|+.+++.|+..-+-
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~--f~~-~A~~lAs~Gf~Va~~~hpgs~~~~~ 114 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTG--FAW-LAEHLASYGFVVAAPDHPGSNAGGA 114 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccc--hhh-hHHHHhhCceEEEeccCCCcccccC
Confidence 555666554 3678899998887642 12489999999996444333 332 2355677899999999999764443
Q ss_pred hHHhhcccc----CCcChHHHHHHHHHHHHHc-------CCCCCCcEEEEEeChhHHHHHHHHhcCCC
Q psy2521 602 DWHNAGRLL----KKQNCFDDFQAAAEYMINK-------KYTKPKYITIMGGSNGGLLVGACLNQRPE 658 (783)
Q Consensus 602 ~~~~~g~~~----~~~~~~~D~~a~~~~l~~~-------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~ 658 (783)
.=+.++... ...+--.|+...+++|++. +-+|+.||+++|||+||+.++.++..+.+
T Consensus 115 ~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 115 PAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 323333111 1123356888889988876 34789999999999999999999887665
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.00091 Score=68.98 Aligned_cols=229 Identities=15% Similarity=0.125 Sum_probs=128.4
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
++.|.++...|.|+ +..+ .+|+.+|.++++........ ..++.....+..|+++...
T Consensus 4 gp~~d~~~g~l~~~-D~~~---~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g~l~v~~~~----------------- 60 (246)
T PF08450_consen 4 GPVWDPRDGRLYWV-DIPG---GRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDGRLYVADSG----------------- 60 (246)
T ss_dssp EEEEETTTTEEEEE-ETTT---TEEEEEETTTTEEEEEESSS--EEEEEEECTTSEEEEEETT-----------------
T ss_pred ceEEECCCCEEEEE-EcCC---CEEEEEECCCCeEEEEecCC--CceEEEEccCCEEEEEEcC-----------------
Confidence 57888855556554 4333 36999999998765433333 2466676333566666511
Q ss_pred eEEEEEcCCCCCCceeEEecC-C--CCeeEEEEEEecCCcEEEEEEecCCC---C--cEEEEEECCCCCCCcccCCCCce
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFP-N--GRSLGLHSEVTDCGRYLLVSTSNNTQ---G--SDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~-~--~~~~~~~~~~SpDGk~l~~~~~~~~~---~--~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.+.+.++.+.. -..+...+ . .......+.++|||+ |.+....... . ..||.++..+ . ..
T Consensus 61 ~~~~~d~~~g~--~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~-~---------~~ 127 (246)
T PF08450_consen 61 GIAVVDPDTGK--VTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG-K---------VT 127 (246)
T ss_dssp CEEEEETTTTE--EEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS-E---------EE
T ss_pred ceEEEecCCCc--EEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCCC-e---------EE
Confidence 23334665542 22333332 1 123345789999999 5555433211 1 4699999873 1 22
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCC--CCcEEeecCCCC-ceEEEEEEeeCCEEEEEEecC
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE--KNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~--~~~~~li~~~~~-~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+..+...... .|++||+.||+... ...+|++++++.... ...+.++..... ....++.+..++.|++.....
T Consensus 128 ~~~~~~~~pNGi~~s~dg~~lyv~ds---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~ 204 (246)
T PF08450_consen 128 VVADGLGFPNGIAFSPDGKTLYVADS---FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG 204 (246)
T ss_dssp EEEEEESSEEEEEEETTSSEEEEEET---TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT
T ss_pred EEecCcccccceEECCcchheeeccc---ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC
Confidence 23332222222 59999999988543 345799999864331 111223222212 235677776667777765533
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeec-cccccEEEEEEe
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFT 483 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~-~~d~~~l~~~~s 483 (783)
.+|++++. +|+.+..|.+|...++.+.. -++.++||++.+
T Consensus 205 --~~I~~~~p-~G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 205 --GRIVVFDP-DGKLLREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp --TEEEEEET-TSCEEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred --CEEEEECC-CccEEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 58999999 59988888888224444433 466788887653
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG2984|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.9e-06 Score=80.03 Aligned_cols=193 Identities=17% Similarity=0.232 Sum_probs=108.3
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 636 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~r 636 (783)
.||.+-|.-|... ..|.+...++....-+.++..|.+| ||.+=-. -+...-+.-.+|..+|++-+.+ .+-.+
T Consensus 44 ~iLlipGalGs~~-tDf~pql~~l~k~l~~TivawDPpG---YG~SrPP-~Rkf~~~ff~~Da~~avdLM~a---Lk~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSYK-TDFPPQLLSLFKPLQVTIVAWDPPG---YGTSRPP-ERKFEVQFFMKDAEYAVDLMEA---LKLEP 115 (277)
T ss_pred eeEeccccccccc-ccCCHHHHhcCCCCceEEEEECCCC---CCCCCCC-cccchHHHHHHhHHHHHHHHHH---hCCCC
Confidence 4555667666543 3577777666554459999999999 7743110 0111112224677777776655 35579
Q ss_pred EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc-----hhhhcccccccccch--------hhhCCCCCHHHHH----H
Q psy2521 637 ITIMGGSNGGLLVGACLNQRPELYGAALILVGAL-----DMLRFNKFTIAYYSE--------SEFGSPNNKTHFH----N 699 (783)
Q Consensus 637 i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~-----d~~~~~~~~~~~~~~--------~~~g~p~~~~~~~----~ 699 (783)
..|+|+|-||..++.+|..+++-....|...+.. +...+........|. .-||.-.-+..++ .
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 9999999999999999999998544443332211 111111111111232 1222110011111 1
Q ss_pred HHhcCcc-----cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 700 LLSYSPL-----HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 700 ~~~~sp~-----~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..++--+ -..--| .+++| +||+||..|+.|+-.|.- |...+... .++.+.|.++|.+.
T Consensus 196 v~qf~~~~dG~fCr~~lp--~vkcP-tli~hG~kDp~~~~~hv~-fi~~~~~~----------a~~~~~peGkHn~h 258 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLP--QVKCP-TLIMHGGKDPFCGDPHVC-FIPVLKSL----------AKVEIHPEGKHNFH 258 (277)
T ss_pred HHHHhhcCCCchHhhhcc--cccCC-eeEeeCCcCCCCCCCCcc-chhhhccc----------ceEEEccCCCccee
Confidence 1111111 001112 27888 999999999999888764 43444332 37888899999974
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00053 Score=77.48 Aligned_cols=240 Identities=14% Similarity=0.176 Sum_probs=133.2
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc--ccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~--~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
..++....+||||+.++.+... ..++++++.+++ .+... -.......+.|||||+.++=..
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~-----~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s----------- 222 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSD-----GLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGS----------- 222 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCC-----CcEEEeecccccchhhccccccccceeeeEECCCCcEEEEec-----------
Confidence 3456779999999998877542 468888887766 33221 1222346899999999554333
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...+++.|++... ..-..++. .+..+...+.++|+|+.|+ +.+ ....+.++|+.+|.. ..
T Consensus 223 -----~D~tiriwd~~~~-~~~~~~l~--gH~~~v~~~~f~p~g~~i~-Sgs---~D~tvriWd~~~~~~--------~~ 282 (456)
T KOG0266|consen 223 -----DDKTLRIWDLKDD-GRNLKTLK--GHSTYVTSVAFSPDGNLLV-SGS---DDGTVRIWDVRTGEC--------VR 282 (456)
T ss_pred -----CCceEEEeeccCC-CeEEEEec--CCCCceEEEEecCCCCEEE-Eec---CCCcEEEEeccCCeE--------EE
Confidence 2347888888322 12222332 3344667899999995554 332 336789999987421 22
Q ss_pred eeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCc-eEEEEEE-eeCCEEEEEEecC
Q psy2521 365 TVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR-TLDVVAA-VANNKLIVHYIQN 440 (783)
Q Consensus 365 ~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~-~l~~~~~-~~g~~l~~~~~~~ 440 (783)
.+.+...... .+++||..|+-. . ..+.|..+|+.++... ....+...+.. .+..+.+ .++++++. ...+
T Consensus 283 -~l~~hs~~is~~~f~~d~~~l~s~-s---~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~fsp~~~~ll~-~~~d 355 (456)
T KOG0266|consen 283 -KLKGHSDGISGLAFSPDGNLLVSA-S---YDGTIRVWDLETGSKL-CLKLLSGAENSAPVTSVQFSPNGKYLLS-ASLD 355 (456)
T ss_pred -eeeccCCceEEEEECCCCCEEEEc-C---CCccEEEEECCCCcee-eeecccCCCCCCceeEEEECCCCcEEEE-ecCC
Confidence 2222232222 488888776643 2 2456888898775411 01122222222 3444444 44344444 3333
Q ss_pred CeeEEEEEECCCCceeeeecCC-Ce--EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLD-LG--QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~-~g--~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+.+||+..++.+...... .+ .+..+.....+..++- -.....++.+|+
T Consensus 356 --~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~s----g~~d~~v~~~~~ 408 (456)
T KOG0266|consen 356 --RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYS----GSEDGSVYVWDS 408 (456)
T ss_pred --CeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEE----EeCCceEEEEeC
Confidence 36888999777766655543 22 2222222333333332 122346888887
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.0012 Score=78.19 Aligned_cols=255 Identities=9% Similarity=0.021 Sum_probs=144.8
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC-CceEEEEEE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG-SDWNTLHIK 240 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G-~d~~~i~v~ 240 (783)
.++++|+++.|....++.+...|++++..+|. +|.++ +. + .. ..++|++||+.|.|+....+ ....++|..
T Consensus 133 ~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~--~l~~~--i~--~-~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 133 AITPDNTIMALAEDFLSRRQYGIRFRNLETGN--WYPEL--LD--N-VE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EECCCCCEEEEEecCCCcEEEEEEEEECCCCC--CCCcc--cc--C-cc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 35688999999998888999999999875443 22221 11 1 11 34899999999999987543 234789999
Q ss_pred ECCCCcccc-ccccc--cccCeeEEee-CCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC
Q psy2521 241 DVDTGKDYP-EVLKN--VKFPSISWTH-DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR 316 (783)
Q Consensus 241 Dl~tg~~~~-~~~~~--~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~ 316 (783)
++.|+.... ....+ ..+.-..|.+ |++.+++.... .....+++........+...+...+.+.
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 271 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLAS-------------ATTSEVLLLDAELADAEPFVFLPRRKDH 271 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEEC-------------CccccEEEEECcCCCCCceEEEECCCCC
Confidence 999983211 11111 1112234555 88888755432 1233566666433222333444443333
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEEeeCCEEEEEECCCCCCc
Q psy2521 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIANNGPELIVKTTKNAPKG 395 (783)
Q Consensus 317 ~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~t~~~~~~~ 395 (783)
.+ .+ ...+..+.+..+.+.....|..+++.+ + ..|..++.... .....+...++.|++..+.++ ..
T Consensus 272 ~~--~~--~~~~~~ly~~tn~~~~~~~l~~~~~~~-~-------~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g-~~ 338 (686)
T PRK10115 272 EY--SL--DHYQHRFYLRSNRHGKNFGLYRTRVRD-E-------QQWEELIPPRENIMLEGFTLFTDWLVVEERQRG-LT 338 (686)
T ss_pred EE--EE--EeCCCEEEEEEcCCCCCceEEEecCCC-c-------ccCeEEECCCCCCEEEEEEEECCEEEEEEEeCC-EE
Confidence 22 22 233456666666544557788888764 1 12566666533 244445555788888777654 45
Q ss_pred eEEEEcCCCCCCCCcEEeecCCCCceEEEEEE---eeCCEEEEEEe-cCCeeEEEEEECCCCc
Q psy2521 396 KVVTINLNNPCEKNWKTLIPEDENRTLDVVAA---VANNKLIVHYI-QNVRSVMDLHDLNTGK 454 (783)
Q Consensus 396 ~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~---~~g~~l~~~~~-~~g~~~l~~~dl~~G~ 454 (783)
+|+.+++.++. ...+.-..+.. ...+.. .+++.+++... -.....++.+|+.+++
T Consensus 339 ~l~~~~~~~~~---~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 339 SLRQINRKTRE---VIGIAFDDPAY-VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred EEEEEcCCCCc---eEEecCCCCce-EeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 69999876543 34433122122 222111 22245555554 3445789999996665
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=0.0033 Score=71.89 Aligned_cols=241 Identities=8% Similarity=-0.020 Sum_probs=127.6
Q ss_pred ECCCCcEEEEEEec-CCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 216 FSDNGKHFAYCLSK-SGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 216 ~SPDG~~la~~~~~-~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
++..++++|+.... +|+-...|.++++.....+... ........++|+|+...++.+... ...
T Consensus 34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~---------------Dgt 98 (568)
T PTZ00420 34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE---------------DLT 98 (568)
T ss_pred EeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC---------------CCe
Confidence 55667888887764 3444467888887654432211 111223578999984444444422 235
Q ss_pred EEEEEcCCCCC------CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 294 IYYHVLGTEQD------KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 294 v~~~~lgt~~~------~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
|.+|++.+... +....+.. +......+.|+|+++.++++.+. ...|.++|+.++. ....+.
T Consensus 99 IrIWDi~t~~~~~~~i~~p~~~L~g--H~~~V~sVaf~P~g~~iLaSgS~---DgtIrIWDl~tg~--------~~~~i~ 165 (568)
T PTZ00420 99 IRVWEIPHNDESVKEIKDPQCILKG--HKKKISIIDWNPMNYYIMCSSGF---DSFVNIWDIENEK--------RAFQIN 165 (568)
T ss_pred EEEEECCCCCccccccccceEEeec--CCCcEEEEEECCCCCeEEEEEeC---CCeEEEEECCCCc--------EEEEEe
Confidence 77788764321 11112222 12234678999999988766443 2678999998741 011121
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCce-EEEEEE----eeCCEEEEEEecC-
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT-LDVVAA----VANNKLIVHYIQN- 440 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~-l~~~~~----~~g~~l~~~~~~~- 440 (783)
. ...-.. .|+++|+.|+..+ . ...|..+|+.++.. ...+..+. ... ...++. .+++.|+.....+
T Consensus 166 ~-~~~V~SlswspdG~lLat~s-~---D~~IrIwD~Rsg~~--i~tl~gH~-g~~~s~~v~~~~fs~d~~~IlTtG~d~~ 237 (568)
T PTZ00420 166 M-PKKLSSLKWNIKGNLLSGTC-V---GKHMHIIDPRKQEI--ASSFHIHD-GGKNTKNIWIDGLGGDDNYILSTGFSKN 237 (568)
T ss_pred c-CCcEEEEEECCCCCEEEEEe-c---CCEEEEEECCCCcE--EEEEeccc-CCceeEEEEeeeEcCCCCEEEEEEcCCC
Confidence 1 111122 5899998775433 2 24588889876541 23333332 221 122222 3434455444333
Q ss_pred CeeEEEEEECCC-CceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNT-GKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~-G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
...+|.+||+.+ ++.+..+.++ .+.+ ...++++...++++..+- ..++.|++
T Consensus 238 ~~R~VkLWDlr~~~~pl~~~~ld~~~~~L-~p~~D~~tg~l~lsGkGD---~tIr~~e~ 292 (568)
T PTZ00420 238 NMREMKLWDLKNTTSALVTMSIDNASAPL-IPHYDESTGLIYLIGKGD---GNCRYYQH 292 (568)
T ss_pred CccEEEEEECCCCCCceEEEEecCCccce-EEeeeCCCCCEEEEEECC---CeEEEEEc
Confidence 224799999964 4444444443 3333 223344545566555443 35777777
|
|
| >TIGR03230 lipo_lipase lipoprotein lipase | Back alignment and domain information |
|---|
Probab=98.18 E-value=8.9e-06 Score=89.25 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=76.5
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHH-HHHHc-CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRC-MFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 629 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~-~~l~~-~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~ 629 (783)
+...|++|++||.........|...+. .++.+ ..+.|+++|.+|++... +..+. .+-...-+++.+.+++|.+.
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~--~~t~~vg~~la~lI~~L~~~ 113 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSA--AYTKLVGKDVAKFVNWMQEE 113 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--Ccccc--ccHHHHHHHHHHHHHHHHHh
Confidence 345689999999765433234554333 34432 25999999999965422 11111 11112234566677777654
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...+.+++.++|||+||.+++.++.+.|+.+..++...|.
T Consensus 114 ~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 114 FNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred hCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 3357889999999999999999999999988888887763
|
Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity. |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.0011 Score=75.62 Aligned_cols=205 Identities=10% Similarity=0.062 Sum_probs=112.9
Q ss_pred EEEeeEEECCC-CcEEEEEEecCCCceEEEEEEECCCCcc-cc------ccc--cccccCeeEEeeCCCEEEEEEeecCC
Q psy2521 209 TALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKD-YP------EVL--KNVKFPSISWTHDHKGFFYNQYCDIN 278 (783)
Q Consensus 209 ~~l~~~~~SPD-G~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~------~~~--~~~~~~~~~WspDg~~l~y~~~~~~~ 278 (783)
-.+..++|||+ +++||-+. +...|+|||+.++.. .. ..+ .......++|+|++..++.+...
T Consensus 75 ~~V~~lafsP~~~~lLASgS-----~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~--- 146 (568)
T PTZ00420 75 SSILDLQFNPCFSEILASGS-----EDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGF--- 146 (568)
T ss_pred CCEEEEEEcCCCCCEEEEEe-----CCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeC---
Confidence 45788999997 66665443 235799999986532 10 011 11234688999999887766522
Q ss_pred CCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|.+|++.+.+. ...+..+ ....++.|+|||+.|+.... ...|.++|+.++..
T Consensus 147 ------------DgtIrIWDl~tg~~--~~~i~~~---~~V~SlswspdG~lLat~s~----D~~IrIwD~Rsg~~---- 201 (568)
T PTZ00420 147 ------------DSFVNIWDIENEKR--AFQINMP---KKLSSLKWNIKGNLLSGTCV----GKHMHIIDPRKQEI---- 201 (568)
T ss_pred ------------CCeEEEEECCCCcE--EEEEecC---CcEEEEEECCCCCEEEEEec----CCEEEEEECCCCcE----
Confidence 23688888876532 1222222 23468899999998865432 25799999987410
Q ss_pred CCCCceeeecCccce---eEE----EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC
Q psy2521 359 GKFPLKTVIPGMDHH---HEI----IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 359 ~~~~~~~l~~~~~~~---~~~----~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~ 431 (783)
...+ .+.... ... ++++++.|+-.+..+.....|..+|+..... ....+.-......+...+-.+.+
T Consensus 202 ----i~tl-~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~-pl~~~~ld~~~~~L~p~~D~~tg 275 (568)
T PTZ00420 202 ----ASSF-HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS-ALVTMSIDNASAPLIPHYDESTG 275 (568)
T ss_pred ----EEEE-ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC-ceEEEEecCCccceEEeeeCCCC
Confidence 1111 122211 112 3467776665443332223588888875321 12222111112233333334436
Q ss_pred EEEEEEecCCeeEEEEEECCCCc
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~ 454 (783)
.+++....| ..|++|++.++.
T Consensus 276 ~l~lsGkGD--~tIr~~e~~~~~ 296 (568)
T PTZ00420 276 LIYLIGKGD--GNCRYYQHSLGS 296 (568)
T ss_pred CEEEEEECC--CeEEEEEccCCc
Confidence 677766655 467778875443
|
|
| >PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.17 E-value=8.5e-05 Score=77.84 Aligned_cols=113 Identities=12% Similarity=0.064 Sum_probs=70.1
Q ss_pred EEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh-----HHhh-----ccc
Q psy2521 540 PMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED-----WHNA-----GRL 609 (783)
Q Consensus 540 ~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~-----~~~~-----g~~ 609 (783)
...++.|+.. .....|++|+..|................++. .|+..++....= ||.. +... ...
T Consensus 78 ~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~-~gi~s~~le~Py---yg~RkP~~Q~~s~l~~VsDl~ 152 (348)
T PF09752_consen 78 RFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLK-EGIASLILENPY---YGQRKPKDQRRSSLRNVSDLF 152 (348)
T ss_pred EEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHH-cCcceEEEeccc---ccccChhHhhcccccchhHHH
Confidence 4445667764 23458999998885433221111111234555 499988887554 3321 1000 000
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCce
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELY 660 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf 660 (783)
..+...+.+..+.++||.++|+ .++++.|.||||.++..+++..|.-.
T Consensus 153 ~~g~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv 200 (348)
T PF09752_consen 153 VMGRATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPV 200 (348)
T ss_pred HHHhHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCce
Confidence 1123346677788999999977 48999999999999999999999753
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=98.17 E-value=0.0013 Score=65.90 Aligned_cols=240 Identities=11% Similarity=0.083 Sum_probs=136.6
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..+.||+|.|+|+=++. + ..+.|||.-|... -..++.-...-.-++||.|+.++-...+
T Consensus 57 Ki~~~~ws~Dsr~ivSaSq-D----GklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd------------- 118 (343)
T KOG0286|consen 57 KIYAMDWSTDSRRIVSASQ-D----GKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD------------- 118 (343)
T ss_pred ceeeeEecCCcCeEEeecc-C----CeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC-------------
Confidence 3678999999999875433 3 3589999876543 2233333333578999999988765532
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
....||..............-+.+.+..|.....+.+|+. |+-. +.....-++|+++|. ....+.
T Consensus 119 -N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~-ilT~----SGD~TCalWDie~g~---------~~~~f~ 183 (343)
T KOG0286|consen 119 -NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH-ILTG----SGDMTCALWDIETGQ---------QTQVFH 183 (343)
T ss_pred -ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc-eEec----CCCceEEEEEcccce---------EEEEec
Confidence 2334554432211111112222233344555666766654 4322 233677889998851 223344
Q ss_pred CccceeE--EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 369 GMDHHHE--IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 369 ~~~~~~~--~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
+..++.- .++| ++++++ ...-+ ..-..+|+..+. ...-++.. +..+..+.++..+.-+.+..+|+.-
T Consensus 184 GH~gDV~slsl~p~~~ntFv-Sg~cD---~~aklWD~R~~~---c~qtF~gh-esDINsv~ffP~G~afatGSDD~tc-- 253 (343)
T KOG0286|consen 184 GHTGDVMSLSLSPSDGNTFV-SGGCD---KSAKLWDVRSGQ---CVQTFEGH-ESDINSVRFFPSGDAFATGSDDATC-- 253 (343)
T ss_pred CCcccEEEEecCCCCCCeEE-ecccc---cceeeeeccCcc---eeEeeccc-ccccceEEEccCCCeeeecCCCcee--
Confidence 5555543 3677 655443 33222 234556776543 23333333 3445666666657777777787644
Q ss_pred EEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+...+++....-+ ...|.++..+..++.++..|..+ +...+|.
T Consensus 254 RlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~----~c~vWDt 302 (343)
T KOG0286|consen 254 RLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDF----TCNVWDT 302 (343)
T ss_pred EEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCC----ceeEeec
Confidence 55677666655444433 44456666666677777667766 4778886
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0073 Score=62.68 Aligned_cols=269 Identities=15% Similarity=0.081 Sum_probs=135.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc---cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
...++|+|++|+|.-....+....-.-|-+|-.+|+...+ .+.+.....++.++||+.+|-..+..
T Consensus 42 ptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~----------- 110 (346)
T COG2706 42 PTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS----------- 110 (346)
T ss_pred CceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC-----------
Confidence 4568999999976544433222223455556555764322 12222224678899988766555332
Q ss_pred ccCCceEEEEEcCCCCCC----ceeEEecC------CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 288 AHMGQKIYYHVLGTEQDK----DIPVVEFP------NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~----d~~v~~~~------~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
..|-+..+.....- +.....++ +.+ ......++|||++|+...- ...+|++++++.|. +
T Consensus 111 ----g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~-h~H~a~~tP~~~~l~v~DL---G~Dri~~y~~~dg~---L 179 (346)
T COG2706 111 ----GSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESP-HVHSANFTPDGRYLVVPDL---GTDRIFLYDLDDGK---L 179 (346)
T ss_pred ----ceEEEEEcccCCccccceeeeecCCCCCCccccCC-ccceeeeCCCCCEEEEeec---CCceEEEEEcccCc---c
Confidence 12333333221100 00000000 111 2245778999999986532 23588888887752 2
Q ss_pred cCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe--ecCC--CCceEEEEEEe-eCCE
Q psy2521 358 SGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL--IPED--ENRTLDVVAAV-ANNK 432 (783)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l--i~~~--~~~~l~~~~~~-~g~~ 432 (783)
+... ...+..+.....-.|.|+|+..|+++..+. .-.++.++-..++.+..+.+ +|++ .......+.+. +|++
T Consensus 180 ~~~~-~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrF 257 (346)
T COG2706 180 TPAD-PAEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRF 257 (346)
T ss_pred cccc-ccccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCE
Confidence 1111 111222323233369999998888776543 23455555443443233332 3332 11222334444 4455
Q ss_pred EEEEEecCCeeEEEEEECCCCceeeeecC-C-CeE-EEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceE
Q psy2521 433 LIVHYIQNVRSVMDLHDLNTGKRLHSFPL-D-LGQ-ITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPT 509 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-~-~g~-v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~ 509 (783)
||++-+....-.++.+|..+|+. ..+.. + .|. -..|..++.++.|+..-+.-.+ -.+|+.|. ++| +.+
T Consensus 258 LYasNRg~dsI~~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~-i~vf~~d~-----~TG--~L~ 328 (346)
T COG2706 258 LYASNRGHDSIAVFSVDPDGGKL-ELVGITPTEGQFPRDFNINPSGRFLIAANQKSDN-ITVFERDK-----ETG--RLT 328 (346)
T ss_pred EEEecCCCCeEEEEEEcCCCCEE-EEEEEeccCCcCCccceeCCCCCEEEEEccCCCc-EEEEEEcC-----CCc--eEE
Confidence 66554444333445556644543 33321 1 233 2456667777777766554444 67888887 678 555
Q ss_pred EEe
Q psy2521 510 IFR 512 (783)
Q Consensus 510 ~~~ 512 (783)
++.
T Consensus 329 ~~~ 331 (346)
T COG2706 329 LLG 331 (346)
T ss_pred ecc
Confidence 543
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.00053 Score=73.35 Aligned_cols=206 Identities=11% Similarity=0.058 Sum_probs=105.7
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccc-------cCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVK-------FPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~-------~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+.+|||||+|.+. +.+. ...+-|+|+++++.+.+. ..++. .....-++||+.+.++.-.+
T Consensus 109 ~~~ls~dgk~l~V~-n~~p--~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~-------- 177 (352)
T TIGR02658 109 MTSLTPDNKTLLFY-QFSP--SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTK-------- 177 (352)
T ss_pred eEEECCCCCEEEEe-cCCC--CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCC--------
Confidence 68999999987654 3221 257999999999876532 22221 01122245555444443110
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
+ ++.... ..+|...+.+ .+..+.+++ ||++++++. . ..|+++|+.+... . ...+|
T Consensus 178 ----g---~~~~~~--------~~vf~~~~~~-v~~rP~~~~~dg~~~~vs~-e----G~V~~id~~~~~~-~--~~~~~ 233 (352)
T TIGR02658 178 ----G---NPKIKP--------TEVFHPEDEY-LINHPAYSNKSGRLVWPTY-T----GKIFQIDLSSGDA-K--FLPAI 233 (352)
T ss_pred ----C---ceEEee--------eeeecCCccc-cccCCceEcCCCcEEEEec-C----CeEEEEecCCCcc-e--eccee
Confidence 0 111111 1122211111 111223456 888876542 2 6899999866211 1 11122
Q ss_pred eeeecC------ccceeE--EEEeeCCEEEEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee
Q psy2521 364 KTVIPG------MDHHHE--IIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA 429 (783)
Q Consensus 364 ~~l~~~------~~~~~~--~~s~dg~~l~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~ 429 (783)
..+... +..++. .+++||+++|+..... .+...|+.+|..+.+ ....++-+ ... ..+.+..
T Consensus 234 ~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k---vi~~i~vG-~~~-~~iavS~ 308 (352)
T TIGR02658 234 EAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK---RLRKIELG-HEI-DSINVSQ 308 (352)
T ss_pred eeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCe---EEEEEeCC-Cce-eeEEECC
Confidence 211111 112222 4888999999865422 233479999998765 23333322 222 2333333
Q ss_pred CCE-EEEEEecCCeeEEEEEECCCCceeeee
Q psy2521 430 NNK-LIVHYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 430 g~~-l~~~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
+++ +++..... ...|.++|..+++.++.+
T Consensus 309 Dgkp~lyvtn~~-s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 309 DAKPLLYALSTG-DKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCCeEEEEeCCC-CCcEEEEECcCCeEEeee
Confidence 344 44444332 346999999999887777
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1553|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.8e-06 Score=82.39 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=96.9
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC-CCCChhHH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWH 604 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~~~~ 604 (783)
-.+.++.+.||.+|-...+....-......-+|++.-|.-|.-.-- .+..-+ +.||.|+-.|..|- |.-|
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEvG----~m~tP~-~lgYsvLGwNhPGFagSTG---- 284 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEVG----VMNTPA-QLGYSVLGWNHPGFAGSTG---- 284 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEee----eecChH-HhCceeeccCCCCccccCC----
Confidence 4677888999999987766544322223346788888754322110 011223 46999999999993 3233
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~ 676 (783)
...-.++..-..+++++.|..--..++.|.++|+|-||+-+++++..+||. +|+|..+.|-|++...
T Consensus 285 ----~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllpLA 351 (517)
T KOG1553|consen 285 ----LPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLPLA 351 (517)
T ss_pred ----CCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhhHH
Confidence 223345556666788888876556788999999999999999999999986 9999999998887553
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.15 E-value=0.0022 Score=66.42 Aligned_cols=258 Identities=14% Similarity=0.155 Sum_probs=129.4
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC
Q psy2521 165 RQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 244 (783)
Q Consensus 165 ~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t 244 (783)
+++..+|-.-..+.+..-.-|..+..+|. -.+++-........ -.+++++||++|.-+.-..| .|.|+.+..
T Consensus 49 ~~~~~LY~v~~~~~~ggvaay~iD~~~G~-Lt~ln~~~~~g~~p---~yvsvd~~g~~vf~AnY~~g----~v~v~p~~~ 120 (346)
T COG2706 49 PDQRHLYVVNEPGEEGGVAAYRIDPDDGR-LTFLNRQTLPGSPP---CYVSVDEDGRFVFVANYHSG----SVSVYPLQA 120 (346)
T ss_pred CCCCEEEEEEecCCcCcEEEEEEcCCCCe-EEEeeccccCCCCC---eEEEECCCCCEEEEEEccCc----eEEEEEccc
Confidence 34555665555555555555666543343 33444333322222 45789999998765554333 466776643
Q ss_pred -Cccccc---c--ccc--------cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc--ee
Q psy2521 245 -GKDYPE---V--LKN--------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD--IP 308 (783)
Q Consensus 245 -g~~~~~---~--~~~--------~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d--~~ 308 (783)
|..... . .+. .......+.||++.|+-.... -.+|+..++..+.-+. ..
T Consensus 121 dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG---------------~Dri~~y~~~dg~L~~~~~~ 185 (346)
T COG2706 121 DGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLG---------------TDRIFLYDLDDGKLTPADPA 185 (346)
T ss_pred CCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecC---------------CceEEEEEcccCcccccccc
Confidence 443211 0 000 012356789999988766521 2367777776443221 11
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce---eE-EEEeeCCEE
Q psy2521 309 VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH---HE-IIANNGPEL 384 (783)
Q Consensus 309 v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~---~~-~~s~dg~~l 384 (783)
......+| ..+.+.|+||++.+. ++-+ ++|-++..... .+.+..-.....+-.++.+. .. .+++||+.|
T Consensus 186 ~v~~G~GP---RHi~FHpn~k~aY~v-~EL~--stV~v~~y~~~-~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL 258 (346)
T COG2706 186 EVKPGAGP---RHIVFHPNGKYAYLV-NELN--STVDVLEYNPA-VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL 258 (346)
T ss_pred ccCCCCCc---ceEEEcCCCcEEEEE-eccC--CEEEEEEEcCC-CceEEEeeeeccCccccCCCCceeEEEECCCCCEE
Confidence 12222333 347899999987654 3323 34444444331 11221111111122222221 12 489999877
Q ss_pred EEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC-CEEEEEEecCCeeEEEEEECCCCce
Q psy2521 385 IVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-NKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 385 ~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g-~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
| .+||....-.++.+|.+++..+ .....+.. ...-..+.+..+ +.|++...+...-.++..|.++|+.
T Consensus 259 Y-asNRg~dsI~~f~V~~~~g~L~-~~~~~~te-g~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L 327 (346)
T COG2706 259 Y-ASNRGHDSIAVFSVDPDGGKLE-LVGITPTE-GQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRL 327 (346)
T ss_pred E-EecCCCCeEEEEEEcCCCCEEE-EEEEeccC-CcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceE
Confidence 6 5898776556777777665411 11222221 222223444433 4555554444445566677777764
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=0.00029 Score=81.17 Aligned_cols=155 Identities=14% Similarity=0.078 Sum_probs=96.8
Q ss_pred CcEEeCCeEEEEEEcC---CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-------C
Q psy2521 162 APQRQENNYFYFHNKG---LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-------G 231 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~---~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-------G 231 (783)
.-+++|++..|..... .+....||+.+. +++.+.++.-. .+..++|||||++|+|..+.+ .
T Consensus 356 aiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--------~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 356 ALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--------SLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred eECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--------CCCCceECCCCCceEEEecCcceEEEecc
Confidence 3457899999987521 234578888775 44445544322 167899999999999886431 1
Q ss_pred CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEE---EEcCCCCCCcee
Q psy2521 232 SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY---HVLGTEQDKDIP 308 (783)
Q Consensus 232 ~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~---~~lgt~~~~d~~ 308 (783)
+...+|+++++++|+... ...+ ..+.+.|||||++|+|+. + .+|++ .+.+.+ +..+
T Consensus 427 ~~~gql~~~~vd~ge~~~-~~~g-~Issl~wSpDG~RiA~i~--~---------------g~v~Va~Vvr~~~G--~~~l 485 (591)
T PRK13616 427 PATGQLARTPVDASAVAS-RVPG-PISELQLSRDGVRAAMII--G---------------GKVYLAVVEQTEDG--QYAL 485 (591)
T ss_pred CCCceEEEEeccCchhhh-ccCC-CcCeEEECCCCCEEEEEE--C---------------CEEEEEEEEeCCCC--ceee
Confidence 223589999999887654 3232 247999999999999988 1 15665 332222 1112
Q ss_pred -----EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 309 -----VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 309 -----v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
+.....+ ...++.|..|++ |++.. .+ ....+|.+++++
T Consensus 486 ~~~~~l~~~l~~--~~~~l~W~~~~~-L~V~~-~~-~~~~v~~v~vDG 528 (591)
T PRK13616 486 TNPREVGPGLGD--TAVSLDWRTGDS-LVVGR-SD-PEHPVWYVNLDG 528 (591)
T ss_pred cccEEeecccCC--ccccceEecCCE-EEEEe-cC-CCCceEEEecCC
Confidence 2211111 124678999999 44332 22 336789999987
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.0012 Score=71.37 Aligned_cols=116 Identities=12% Similarity=0.163 Sum_probs=67.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-Ccccc--ccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYP--EVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~--~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
...+.++|||++|+.+...+ ..|.++|+++ |.... ..... .....+.++|||+.+|.....
T Consensus 82 p~~i~~~~~g~~l~v~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~----------- 146 (330)
T PRK11028 82 PTHISTDHQGRFLFSASYNA----NCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK----------- 146 (330)
T ss_pred ceEEEECCCCCEEEEEEcCC----CeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC-----------
Confidence 35789999999876554322 4688898864 32211 11111 112467899999888765522
Q ss_pred cccCCceEEEEEcCCCCCC---ceeEEe--cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDK---DIPVVE--FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~---d~~v~~--~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
...|+++++.+...- ...... ....+ ..+.++|||++++... . ..+.|.+++++.
T Consensus 147 ----~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p---~~~~~~pdg~~lyv~~-~--~~~~v~v~~~~~ 206 (330)
T PRK11028 147 ----EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGP---RHMVFHPNQQYAYCVN-E--LNSSVDVWQLKD 206 (330)
T ss_pred ----CCEEEEEEECCCCcccccCCCceecCCCCCC---ceEEECCCCCEEEEEe-c--CCCEEEEEEEeC
Confidence 336888888652110 000111 11222 3578999999987653 2 236888888763
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00093 Score=73.58 Aligned_cols=248 Identities=13% Similarity=0.085 Sum_probs=143.4
Q ss_pred EEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--cccccCee
Q psy2521 183 ILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSI 260 (783)
Q Consensus 183 ~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--~~~~~~~~ 260 (783)
.+|+-....+....|.+.+ ...+..+.|+|+|++||..... ..+.|||+...+.++... ...+.+.+
T Consensus 198 ~vylW~~~s~~v~~l~~~~------~~~vtSv~ws~~G~~LavG~~~-----g~v~iwD~~~~k~~~~~~~~h~~rvg~l 266 (484)
T KOG0305|consen 198 SVYLWSASSGSVTELCSFG------EELVTSVKWSPDGSHLAVGTSD-----GTVQIWDVKEQKKTRTLRGSHASRVGSL 266 (484)
T ss_pred eEEEEecCCCceEEeEecC------CCceEEEEECCCCCEEEEeecC-----CeEEEEehhhccccccccCCcCceeEEE
Confidence 3454444456656666654 2347889999999999998753 569999998877655332 23455789
Q ss_pred EEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC
Q psy2521 261 SWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ 340 (783)
Q Consensus 261 ~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~ 340 (783)
+|. +..+. +- .+...+..+++-..+..-. +... +..-..+..|++|+++++ .+..
T Consensus 267 aW~--~~~ls-sG---------------sr~~~I~~~dvR~~~~~~~-~~~~--H~qeVCgLkws~d~~~lA----SGgn 321 (484)
T KOG0305|consen 267 AWN--SSVLS-SG---------------SRDGKILNHDVRISQHVVS-TLQG--HRQEVCGLKWSPDGNQLA----SGGN 321 (484)
T ss_pred ecc--CceEE-Ee---------------cCCCcEEEEEEecchhhhh-hhhc--ccceeeeeEECCCCCeec----cCCC
Confidence 996 22222 22 1223455555554432111 1111 122346899999999997 3334
Q ss_pred CcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC
Q psy2521 341 GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE 418 (783)
Q Consensus 341 ~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~ 418 (783)
.+.++++|.... .+...+.. ..+.+- .|.|...-|+... .+.....|..++..++.. ...+-+ +
T Consensus 322 DN~~~Iwd~~~~--------~p~~~~~~-H~aAVKA~awcP~q~~lLAsG-GGs~D~~i~fwn~~~g~~--i~~vdt-g- 387 (484)
T KOG0305|consen 322 DNVVFIWDGLSP--------EPKFTFTE-HTAAVKALAWCPWQSGLLATG-GGSADRCIKFWNTNTGAR--IDSVDT-G- 387 (484)
T ss_pred ccceEeccCCCc--------cccEEEec-cceeeeEeeeCCCccCceEEc-CCCcccEEEEEEcCCCcE--eccccc-C-
Confidence 489999998541 12222333 233322 5888766666543 334455688888776541 222221 1
Q ss_pred CceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEE
Q psy2521 419 NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYG 481 (783)
Q Consensus 419 ~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~ 481 (783)
..+-.-.|+...+.|+.+ ......+|.+|+..+=+.+..+.....-|..++++||+..++..
T Consensus 388 sQVcsL~Wsk~~kEi~st-hG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~ 449 (484)
T KOG0305|consen 388 SQVCSLIWSKKYKELLST-HGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTG 449 (484)
T ss_pred CceeeEEEcCCCCEEEEe-cCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEe
Confidence 344444455443345443 33344578888876655556666555557788899998766643
|
|
| >COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.10 E-value=3.2e-05 Score=76.50 Aligned_cols=194 Identities=15% Similarity=0.128 Sum_probs=105.0
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC-C
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY-T 632 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~-~ 632 (783)
+.-++.+-|-|.+.+.-..|. ..|.. -+.++.+.+.| .|..+ +..-++|+.+.++.|...-. .
T Consensus 7 ~~~L~cfP~AGGsa~~fr~W~----~~lp~-~iel~avqlPG---R~~r~--------~ep~~~di~~Lad~la~el~~~ 70 (244)
T COG3208 7 RLRLFCFPHAGGSASLFRSWS----RRLPA-DIELLAVQLPG---RGDRF--------GEPLLTDIESLADELANELLPP 70 (244)
T ss_pred CceEEEecCCCCCHHHHHHHH----hhCCc-hhheeeecCCC---ccccc--------CCcccccHHHHHHHHHHHhccc
Confidence 344555566554444322232 22321 37788899998 33222 12235677777777765422 2
Q ss_pred CC-CcEEEEEeChhHHHHHHHHhcC------CCceeEEEEcCCcchhhhc-ccccccccc---hhhh-CCC----CCHHH
Q psy2521 633 KP-KYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRF-NKFTIAYYS---ESEF-GSP----NNKTH 696 (783)
Q Consensus 633 d~-~ri~i~G~S~GG~l~~~~~~~~------p~lf~a~i~~~~~~d~~~~-~~~~~~~~~---~~~~-g~p----~~~~~ 696 (783)
.+ ...+++||||||.++-.++-+. |..|-..-+.+|..+--.. +.... ... ..++ |.| +++|.
T Consensus 71 ~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D-~~~l~~l~~lgG~p~e~led~El 149 (244)
T COG3208 71 LLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDD-ADFLADLVDLGGTPPELLEDPEL 149 (244)
T ss_pred cCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCH-HHHHHHHHHhCCCChHHhcCHHH
Confidence 22 3699999999999998887542 3333334444553332111 11110 011 1223 444 23332
Q ss_pred HHHH--------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCc
Q psy2521 697 FHNL--------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGH 768 (783)
Q Consensus 697 ~~~~--------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gH 768 (783)
.+.+ +...-|.....+ .+.+| +.++.|.+|..|...+...|.+.. +....+++++ +||
T Consensus 150 ~~l~LPilRAD~~~~e~Y~~~~~~--pl~~p-i~~~~G~~D~~vs~~~~~~W~~~t----------~~~f~l~~fd-GgH 215 (244)
T COG3208 150 MALFLPILRADFRALESYRYPPPA--PLACP-IHAFGGEKDHEVSRDELGAWREHT----------KGDFTLRVFD-GGH 215 (244)
T ss_pred HHHHHHHHHHHHHHhcccccCCCC--CcCcc-eEEeccCcchhccHHHHHHHHHhh----------cCCceEEEec-Ccc
Confidence 2211 112233333322 27888 999999999999776655554433 4468899987 489
Q ss_pred cCCccchhhh
Q psy2521 769 GQGKALDIEL 778 (783)
Q Consensus 769 g~~~~~~~~~ 778 (783)
.+-......+
T Consensus 216 Ffl~~~~~~v 225 (244)
T COG3208 216 FFLNQQREEV 225 (244)
T ss_pred eehhhhHHHH
Confidence 9876555443
|
|
| >KOG2564|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=79.61 Aligned_cols=122 Identities=20% Similarity=0.290 Sum_probs=78.1
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
..+.+.++..|+ .+..++..|. ....|++++.|||..+.++ |..-...+....-..++++|.||+|+-- .
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk---~ 118 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSALS--FAIFASELKSKIRCRCLALDLRGHGETK---V 118 (343)
T ss_pred cccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccchh--HHHHHHHHHhhcceeEEEeeccccCccc---c
Confidence 455566666555 4555555543 3467999999998665554 4333333333334667899999977643 1
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC--CCc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR--PEL 659 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~l 659 (783)
+............||-+.++++-.. .+.+|.++||||||.++...+.+. |.+
T Consensus 119 ~~e~dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k~lpsl 172 (343)
T KOG2564|consen 119 ENEDDLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASKTLPSL 172 (343)
T ss_pred CChhhcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhhhchhh
Confidence 1111233344578999888888643 345799999999999998776543 553
|
|
| >TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00013 Score=81.83 Aligned_cols=83 Identities=16% Similarity=0.109 Sum_probs=58.4
Q ss_pred HHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHH----HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH-
Q psy2521 577 RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD----DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA- 651 (783)
Q Consensus 577 ~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~----D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~- 651 (783)
+.++|.++|+.|++++.|.-+.-.+ ...++ .+.+|++.+.+. +..++|-++|+|+||.+++.
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~r-----------~~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~~ 305 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAHR-----------EWGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAAL 305 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhhc-----------CCCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHHH
Confidence 4566666899999999998432211 12233 444566666543 56779999999999999986
Q ss_pred ---HHhcCCC-ceeEEEEcCCcchh
Q psy2521 652 ---CLNQRPE-LYGAALILVGALDM 672 (783)
Q Consensus 652 ---~~~~~p~-lf~a~i~~~~~~d~ 672 (783)
++.++++ ..+.++..+..+|.
T Consensus 306 ~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 306 VGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHhcCCCCceeeEEeeeccccc
Confidence 5677786 68888877776664
|
This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. |
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0012 Score=70.99 Aligned_cols=193 Identities=15% Similarity=0.186 Sum_probs=112.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+..+++||||++.|-+.+ | .+++++|=.+|+.+-+.- .......++||||+++|+-.+.+.
T Consensus 193 V~~VRysPDG~~Fat~gs----D-gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk---------- 257 (603)
T KOG0318|consen 193 VNCVRYSPDGSRFATAGS----D-GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK---------- 257 (603)
T ss_pred eeeEEECCCCCeEEEecC----C-ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc----------
Confidence 678999999999885533 2 579999999998654221 111235789999999998777332
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.+.+|++.+..-...+.....- ....++.-|. ...|+-.+.. ..|-+++.... . ...+
T Consensus 258 ------t~KIWdVs~~slv~t~~~~~~v-~dqqvG~lWq--kd~lItVSl~----G~in~ln~~d~-------~--~~~~ 315 (603)
T KOG0318|consen 258 ------TIKIWDVSTNSLVSTWPMGSTV-EDQQVGCLWQ--KDHLITVSLS----GTINYLNPSDP-------S--VLKV 315 (603)
T ss_pred ------eEEEEEeeccceEEEeecCCch-hceEEEEEEe--CCeEEEEEcC----cEEEEecccCC-------C--hhhe
Confidence 3445566554322222222221 1245678887 2233332222 35666776662 1 2234
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
+.+...... ..++|+++||- ... .+.|..++...+.. -.+.+......+..+...+.+.++-...+|.
T Consensus 316 i~GHnK~ITaLtv~~d~~~i~S-gsy---DG~I~~W~~~~g~~---~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~--- 385 (603)
T KOG0318|consen 316 ISGHNKSITALTVSPDGKTIYS-GSY---DGHINSWDSGSGTS---DRLAGKGHTNQIKGMAASESGELFTIGWDDT--- 385 (603)
T ss_pred ecccccceeEEEEcCCCCEEEe-ecc---CceEEEEecCCccc---cccccccccceEEEEeecCCCcEEEEecCCe---
Confidence 455544443 47889877764 222 35688898876541 2344444344455555554366776666663
Q ss_pred EEEEEC
Q psy2521 445 MDLHDL 450 (783)
Q Consensus 445 l~~~dl 450 (783)
|++.++
T Consensus 386 l~~~~~ 391 (603)
T KOG0318|consen 386 LRVISL 391 (603)
T ss_pred EEEEec
Confidence 666665
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.0067 Score=68.74 Aligned_cols=239 Identities=15% Similarity=0.094 Sum_probs=123.9
Q ss_pred ECCCCcEEEEEEecCCCceEEEEEEECCCCccccc--cc--cccccCeeEEee-CCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE--VL--KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 216 ~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~--~~--~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
++++++++|+..+..|. ...+...+.|+.... .+ .......+.|+| |++.|+-.+.
T Consensus 36 ~~~n~~~~a~~w~~~gg---~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~---------------- 96 (493)
T PTZ00421 36 IACNDRFIAVPWQQLGS---TAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE---------------- 96 (493)
T ss_pred EeECCceEEEEEecCCc---eEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----------------
Confidence 66778888888776564 122333345543221 11 112235789999 7776654442
Q ss_pred CceEEEEEcCCCCC-----CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 291 GQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 291 ~~~v~~~~lgt~~~-----~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|.+|++.+... +.+..+.. +......+.|+|++..++++.+. ...|.++|+.++. ...
T Consensus 97 DgtIkIWdi~~~~~~~~~~~~l~~L~g--H~~~V~~l~f~P~~~~iLaSgs~---DgtVrIWDl~tg~--------~~~- 162 (493)
T PTZ00421 97 DGTIMGWGIPEEGLTQNISDPIVHLQG--HTKKVGIVSFHPSAMNVLASAGA---DMVVNVWDVERGK--------AVE- 162 (493)
T ss_pred CCEEEEEecCCCccccccCcceEEecC--CCCcEEEEEeCcCCCCEEEEEeC---CCEEEEEECCCCe--------EEE-
Confidence 23577778765321 11222222 12234578999997655554432 2679999998741 111
Q ss_pred eecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec-CCe
Q psy2521 366 VIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ-NVR 442 (783)
Q Consensus 366 l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~-~g~ 442 (783)
.+....... . .|+++|+.|+..+ . ...|..+|+.++. ....+..+.........+..+++.++..... ...
T Consensus 163 ~l~~h~~~V~sla~spdG~lLatgs-~---Dg~IrIwD~rsg~--~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~D 236 (493)
T PTZ00421 163 VIKCHSDQITSLEWNLDGSLLCTTS-K---DKKLNIIDPRDGT--IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQ 236 (493)
T ss_pred EEcCCCCceEEEEEECCCCEEEEec-C---CCEEEEEECCCCc--EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCC
Confidence 222222222 2 4899988666433 2 3468888987654 1333433332222233444443455443322 223
Q ss_pred eEEEEEECCCCc-eeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGK-RLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~-~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..|.+||+.+.+ ....+... ...+.....+++++.++..-.+ -..|..||+
T Consensus 237 r~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkg---Dg~Iriwdl 289 (493)
T PTZ00421 237 RQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKG---EGNIRCFEL 289 (493)
T ss_pred CeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeC---CCeEEEEEe
Confidence 579999996543 22223322 1223233456666666554322 236778887
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.0012 Score=65.07 Aligned_cols=230 Identities=13% Similarity=0.168 Sum_probs=129.6
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+-++....|+|-..-+.++.+ |. ..|++||..+++.+..+......-.+.|+|||+++++...++
T Consensus 64 ~~svdql~w~~~~~d~~atas--~d--k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD----------- 128 (313)
T KOG1407|consen 64 TDSVDQLCWDPKHPDLFATAS--GD--KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD----------- 128 (313)
T ss_pred CcchhhheeCCCCCcceEEec--CC--ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc-----------
Confidence 346777889887776666654 22 579999999998776543333234789999999999887544
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
.|-..+..+.+ .+.+++. ..+.....|.-++...+++.. . ..|-++.-... .|...+.
T Consensus 129 -----~it~id~r~~~----~~~~~~~-~~e~ne~~w~~~nd~Fflt~G--l--G~v~ILsypsL--------kpv~si~ 186 (313)
T KOG1407|consen 129 -----RITFIDARTYK----IVNEEQF-KFEVNEISWNNSNDLFFLTNG--L--GCVEILSYPSL--------KPVQSIK 186 (313)
T ss_pred -----cEEEEEecccc----eeehhcc-cceeeeeeecCCCCEEEEecC--C--ceEEEEecccc--------ccccccc
Confidence 23344333221 1111111 112345677766665544322 2 23344433221 1122222
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
.....-+. .|+|+|++|..-+. + ..+-++|++.-- -...++.- +..+..+++.-+++++.+..+| .-|-
T Consensus 187 AH~snCicI~f~p~GryfA~GsA-D---AlvSLWD~~ELi---C~R~isRl-dwpVRTlSFS~dg~~lASaSED--h~ID 256 (313)
T KOG1407|consen 187 AHPSNCICIEFDPDGRYFATGSA-D---ALVSLWDVDELI---CERCISRL-DWPVRTLSFSHDGRMLASASED--HFID 256 (313)
T ss_pred cCCcceEEEEECCCCceEeeccc-c---ceeeccChhHhh---hheeeccc-cCceEEEEeccCcceeeccCcc--ceEE
Confidence 22222333 49999998886332 2 234456664322 22344443 3334444444446777776666 3456
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 485 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~ 485 (783)
+-+.++|..+.+|+-. +....+.|.|...-|.|..+..
T Consensus 257 IA~vetGd~~~eI~~~-~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 257 IAEVETGDRVWEIPCE-GPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred eEecccCCeEEEeecc-CCceeEEecCCCceeeEEecCC
Confidence 6667789988888653 3334567888887777766543
|
|
| >COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00023 Score=64.91 Aligned_cols=167 Identities=14% Similarity=0.072 Sum_probs=95.2
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCC--CCCCChhHHhhccccCCcChH-HHHHHHHHHHHHcC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG--GGELGEDWHNAGRLLKKQNCF-DDFQAAAEYMINKK 630 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG--~g~~G~~~~~~g~~~~~~~~~-~D~~a~~~~l~~~~ 630 (783)
..-+||..||.. .+++..+.......|+++|+.|+.+++.= .--+| ++. ........ ...+.++-.|...
T Consensus 13 ~~~tilLaHGAG-asmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg---~rk--Pp~~~~t~~~~~~~~~aql~~~- 85 (213)
T COG3571 13 APVTILLAHGAG-ASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTG---RRK--PPPGSGTLNPEYIVAIAQLRAG- 85 (213)
T ss_pred CCEEEEEecCCC-CCCCCHHHHHHHHHHHhCceeEEEeecchhhhcccc---CCC--CcCccccCCHHHHHHHHHHHhc-
Confidence 445777888874 44444445556667778899999988631 11111 000 11112222 2334444455554
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE-cCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCC
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI-LVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~-~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v 709 (783)
.+..+++|-|+||||-++..++..----..+.+| .+||. --|.|+.... .++
T Consensus 86 -l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh----------------ppGKPe~~Rt----------~HL 138 (213)
T COG3571 86 -LAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH----------------PPGKPEQLRT----------EHL 138 (213)
T ss_pred -ccCCceeeccccccchHHHHHHHhhcCCcceEEEecCccC----------------CCCCcccchh----------hhc
Confidence 3445899999999999988776431101223322 12211 1134433211 234
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.. +++| +||+||+.|..=...+.. ...- ..++++++..++.|...
T Consensus 139 ~g----l~tP-tli~qGtrD~fGtr~~Va---~y~l---------s~~iev~wl~~adHDLk 183 (213)
T COG3571 139 TG----LKTP-TLITQGTRDEFGTRDEVA---GYAL---------SDPIEVVWLEDADHDLK 183 (213)
T ss_pred cC----CCCC-eEEeecccccccCHHHHH---hhhc---------CCceEEEEeccCccccc
Confidence 33 6777 999999999876665542 2222 34789999999999874
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0024 Score=62.61 Aligned_cols=234 Identities=12% Similarity=0.078 Sum_probs=132.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+....++||++.||-+. +..|+++|+.++.+.+. +++.. ....+.|--||+..|-.+.
T Consensus 43 VNrLeiTpdk~~LAaa~------~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgse------------- 103 (311)
T KOG0315|consen 43 VNRLEITPDKKDLAAAG------NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSE------------- 103 (311)
T ss_pred eeeEEEcCCcchhhhcc------CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCC-------------
Confidence 67789999999999653 37899999999987553 23222 3367889999987764441
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...+.+|++...+.+ ..|+.+. + ...+...|....|+.. +....|+++|+..... -..++
T Consensus 104 ---Dgt~kIWdlR~~~~q--R~~~~~s-p--Vn~vvlhpnQteLis~----dqsg~irvWDl~~~~c--------~~~li 163 (311)
T KOG0315|consen 104 ---DGTVKIWDLRSLSCQ--RNYQHNS-P--VNTVVLHPNQTELISG----DQSGNIRVWDLGENSC--------THELI 163 (311)
T ss_pred ---CceEEEEeccCcccc--hhccCCC-C--cceEEecCCcceEEee----cCCCcEEEEEccCCcc--------ccccC
Confidence 124555666554333 2333321 2 2356677887777643 2236899999976211 12233
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec-----CCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-----EDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~-----~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+.+.... .+.|||+.+.-..|+ +..|.+++-+... ...+.| ......+.-..++++++|+..+. +
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnk----G~cyvW~l~~~~~--~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ss-d 236 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNK----GNCYVWRLLNHQT--ASELEPVHKFQAHNGHILRCLLSPDVKYLATCSS-D 236 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCC----ccEEEEEccCCCc--cccceEhhheecccceEEEEEECCCCcEEEeecC-C
Confidence 33232222 477999988876654 4577887755321 222322 22355566666676455554443 3
Q ss_pred CeeEEEEEECCCC-ceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTG-KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G-~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+++|+.++= +....++...+.+-.-..+.|+ +..++.++-. ....+|+
T Consensus 237 --ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg-~YlvTassd~---~~rlW~~ 287 (311)
T KOG0315|consen 237 --KTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG-EYLVTASSDH---TARLWDL 287 (311)
T ss_pred --ceEEEEecCCceeeEEEeecCCceEEeeeeccCc-cEEEecCCCC---ceeeccc
Confidence 36888888432 2222333334444333344444 3444554443 3445666
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.0011 Score=72.46 Aligned_cols=224 Identities=17% Similarity=0.148 Sum_probs=106.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--------cccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------KNVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
..++++||||++++.+....+ ++.++|.+|.+.+.... ...+..++.-+|++..+++.-.+
T Consensus 80 ~~~i~~s~DG~~~~v~n~~~~----~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd------- 148 (369)
T PF02239_consen 80 PRGIAVSPDGKYVYVANYEPG----TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD------- 148 (369)
T ss_dssp EEEEEE--TTTEEEEEEEETT----EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT-------
T ss_pred cceEEEcCCCCEEEEEecCCC----ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc-------
Confidence 457999999999977654433 69999999988654221 11233456677888777766532
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc-----
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI----- 357 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l----- 357 (783)
..++|..+..... ...+-...- ..+..+..|+|||||++...+.. +.+-++|++++....+
T Consensus 149 --------~~~I~vVdy~d~~--~~~~~~i~~-g~~~~D~~~dpdgry~~va~~~s---n~i~viD~~~~k~v~~i~~g~ 214 (369)
T PF02239_consen 149 --------TGEIWVVDYSDPK--NLKVTTIKV-GRFPHDGGFDPDGRYFLVAANGS---NKIAVIDTKTGKLVALIDTGK 214 (369)
T ss_dssp --------TTEEEEEETTTSS--CEEEEEEE---TTEEEEEE-TTSSEEEEEEGGG---TEEEEEETTTTEEEEEEE-SS
T ss_pred --------CCeEEEEEecccc--ccceeeecc-cccccccccCcccceeeeccccc---ceeEEEeeccceEEEEeeccc
Confidence 2378888765442 111111111 12446789999999987754331 3444444433210000
Q ss_pred -------------------------------------c--CCCCce--eeecCccceeE-EEEeeCCEEEEEECCCCCCc
Q psy2521 358 -------------------------------------S--GKFPLK--TVIPGMDHHHE-IIANNGPELIVKTTKNAPKG 395 (783)
Q Consensus 358 -------------------------------------~--~~~~~~--~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~ 395 (783)
. ....|+ +.+.....+.- ..+|+++++|+-+..+....
T Consensus 215 ~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~ 294 (369)
T PF02239_consen 215 KPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDAD 294 (369)
T ss_dssp SBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT
T ss_pred cccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCc
Confidence 0 000010 00111111111 24677777776533222245
Q ss_pred eEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 396 KVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 396 ~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
.|..+|..+.+ ....+.+......+..-+..+|+.++++... +...|.++|..+.+.+.+|+.+
T Consensus 295 ~v~viD~~tl~--~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~-~~~~i~v~D~~Tl~~~~~i~~~ 358 (369)
T PF02239_consen 295 TVQVIDKKTLK--VVKTITPGPGKRVVHMEFNPDGKEVWVSVWD-GNGAIVVYDAKTLKEKKRIPVP 358 (369)
T ss_dssp -EEEEECCGTE--EEE-HHHHHT--EEEEEE-TTSSEEEEEEE---TTEEEEEETTTTEEEEEEE--
T ss_pred eEEEEECcCcc--eeEEEeccCCCcEeccEECCCCCEEEEEEec-CCCEEEEEECCCcEEEEEEEee
Confidence 68888876643 1122222221123443344555666665543 3338999999888887777743
|
... |
| >PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases | Back alignment and domain information |
|---|
Probab=97.98 E-value=9.5e-05 Score=72.44 Aligned_cols=213 Identities=12% Similarity=0.150 Sum_probs=110.0
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC----CCCChhHHhh
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG----GELGEDWHNA 606 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~----g~~G~~~~~~ 606 (783)
+.-.+|..|..|-..|+.- ...++|+||..-| |+..+. .|.. .+..|+.+||.|+.+|.--+ .+-=.++..
T Consensus 7 i~~~~~~~I~vwet~P~~~-~~~~~~tiliA~G-f~rrmd-h~ag-LA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm- 81 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN-EPKRNNTILIAPG-FARRMD-HFAG-LAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM- 81 (294)
T ss_dssp EEETTTEEEEEEEE---TT-S---S-EEEEE-T-T-GGGG-GGHH-HHHHHHTTT--EEEE---B-------------H-
T ss_pred eEcCCCCEEEEeccCCCCC-CcccCCeEEEecc-hhHHHH-HHHH-HHHHHhhCCeEEEeccccccccCCCCChhhcch-
Confidence 3446899999999999874 3456788887754 565554 3443 45667778999999886431 111111111
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchh
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSES 686 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~ 686 (783)
.....|+..+++||...|. .+++++-.|.-|-++..+++. ++ ..-+|..+|++|+.....-..+..+..
T Consensus 82 ------s~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~ 150 (294)
T PF02273_consen 82 ------SIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQ 150 (294)
T ss_dssp ------HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGG
T ss_pred ------HHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhh
Confidence 1124688999999997764 579999999999999999985 66 478888899999976432111111110
Q ss_pred hh--CCCCC---------HHHHH--HHH-hcC----cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 687 EF--GSPNN---------KTHFH--NLL-SYS----PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 687 ~~--g~p~~---------~~~~~--~~~-~~s----p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
.. +.|++ .+.|- .+. .+. -...++. ...| ++.+++..|.-|...+..++...+...
T Consensus 151 ~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~----l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s~- 224 (294)
T PF02273_consen 151 LPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKR----LSIP-FIAFTANDDDWVKQSEVEELLDNINSN- 224 (294)
T ss_dssp S-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT------S--EEEEEETT-TTS-HHHHHHHHTT-TT--
T ss_pred cchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhh----CCCC-EEEEEeCCCccccHHHHHHHHHhcCCC-
Confidence 00 11211 11110 000 111 1233444 5677 999999999999888776665554432
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
...+...+|++|..+..
T Consensus 225 --------~~klysl~Gs~HdL~en 241 (294)
T PF02273_consen 225 --------KCKLYSLPGSSHDLGEN 241 (294)
T ss_dssp ---------EEEEEETT-SS-TTSS
T ss_pred --------ceeEEEecCccchhhhC
Confidence 46778889999998753
|
Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B. |
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00054 Score=73.36 Aligned_cols=240 Identities=14% Similarity=0.124 Sum_probs=135.3
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc------------cccccc-ccCeeEEeeCCCEEEEEEe
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP------------EVLKNV-KFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~------------~~~~~~-~~~~~~WspDg~~l~y~~~ 274 (783)
...+...+|||.|..|+... |+ .+..|+|-++-+... .|.+.+ ....-.|.|+.+..|.+..
T Consensus 214 ~h~i~sl~ys~Tg~~iLvvs---g~--aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s 288 (641)
T KOG0772|consen 214 THQINSLQYSVTGDQILVVS---GS--AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCS 288 (641)
T ss_pred ccccceeeecCCCCeEEEEe---cC--cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEec
Confidence 45578899999999988765 33 567777765543221 111111 1245679999999998884
Q ss_pred ecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCe--eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 275 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS--LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 275 ~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~--~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
.+ ..+..|++.....+..++-..+.... -.....|++||++|+-...+ ..|-+++..+.
T Consensus 289 ~D---------------gtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D----GSIQ~W~~~~~ 349 (641)
T KOG0772|consen 289 YD---------------GTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD----GSIQIWDKGSR 349 (641)
T ss_pred CC---------------CcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC----CceeeeecCCc
Confidence 33 24666777655443333333333221 12467899999998754333 45666665331
Q ss_pred CCCcccCCCCceeeecCccc--eeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCC--CCcEEeecCCCCceEEEEE
Q psy2521 353 PDGKISGKFPLKTVIPGMDH--HHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCE--KNWKTLIPEDENRTLDVVA 426 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~~~--~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~--~~~~~li~~~~~~~l~~~~ 426 (783)
.++ +...+-..... +.. .||.||+.|+-.+.. ..|-.+|+.+... ..|..|...-+ ...-.+
T Consensus 350 ---~v~---p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D----~tLKvWDLrq~kkpL~~~tgL~t~~~--~tdc~F 417 (641)
T KOG0772|consen 350 ---TVR---PVMKVKDAHLPGQDITSISFSYDGNYLLSRGFD----DTLKVWDLRQFKKPLNVRTGLPTPFP--GTDCCF 417 (641)
T ss_pred ---ccc---cceEeeeccCCCCceeEEEeccccchhhhccCC----CceeeeeccccccchhhhcCCCccCC--CCcccc
Confidence 111 11111111111 222 599999988754443 2366777766431 11222222211 112234
Q ss_pred EeeCCEEEEEEec----CCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEec
Q psy2521 427 AVANNKLIVHYIQ----NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 427 ~~~g~~l~~~~~~----~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss 484 (783)
+++ +.|+++... .+...|+.||..+=+.+..|..+..+|....|.|.-+.+++....
T Consensus 418 SPd-~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgd 478 (641)
T KOG0772|consen 418 SPD-DKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGD 478 (641)
T ss_pred CCC-ceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCC
Confidence 455 778776542 234579999876555667777775566677888887777765443
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0016 Score=67.10 Aligned_cols=116 Identities=18% Similarity=0.276 Sum_probs=74.7
Q ss_pred CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 207 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 207 g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
|+.-+..++|.+||..++-++- |+ ..|.|||+++|..+++. .....++-+.|||||+.||-.+.+.
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~--gs--ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da--------- 260 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASF--GS--SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA--------- 260 (445)
T ss_pred CCceeeEEEEcCCCCEEeeccc--Cc--ceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc---------
Confidence 3456889999999998875443 33 67999999999877765 3333346789999999998887543
Q ss_pred ccccCCceEE-EEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 286 TTAHMGQKIY-YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 286 ~~~~~~~~v~-~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
...|| .++.-|. + +.+.. ++..-...|||+|++|+|..+.. ..||-+...
T Consensus 261 -----vfrlw~e~q~wt~--e-rw~lg----sgrvqtacWspcGsfLLf~~sgs---p~lysl~f~ 311 (445)
T KOG2139|consen 261 -----VFRLWQENQSWTK--E-RWILG----SGRVQTACWSPCGSFLLFACSGS---PRLYSLTFD 311 (445)
T ss_pred -----eeeeehhccccee--c-ceecc----CCceeeeeecCCCCEEEEEEcCC---ceEEEEeec
Confidence 12344 2221111 1 11111 12334688999999999987543 455555443
|
|
| >COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=8.4e-05 Score=77.89 Aligned_cols=114 Identities=16% Similarity=0.120 Sum_probs=70.6
Q ss_pred CCccEEEEecCCCCCccCC--------cCcHHH---HHHHHcCCEEEEEecCCCCC--CCChhHHhhc-cc---cCCcCh
Q psy2521 553 RRNPVIIYGYGGYGVSVLP--------TFSISR---CMFLRHFNGIYAIPNIRGGG--ELGEDWHNAG-RL---LKKQNC 615 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~--------~~~~~~---~~~l~~~G~~v~~~~~RG~g--~~G~~~~~~g-~~---~~~~~~ 615 (783)
.+..+||+.||-.|.+... +|-..+ .+-++-.-|-|++.|.-||. .-|..-.... +. ....-+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 4567888899865543221 122111 01122224899999999864 3333221111 11 112356
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 616 FDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+.|.+.+-+.|++.--+ ++|+ ++|+||||+.++..+..+||....+|+.+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 78999988888776333 3555 999999999999999999997766666554
|
|
| >PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins | Back alignment and domain information |
|---|
Probab=97.94 E-value=6.8e-05 Score=77.51 Aligned_cols=121 Identities=22% Similarity=0.314 Sum_probs=83.8
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc----cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS----VLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~----~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+++.+.. |+..|-.+.+..++. .+.-.||+.-|..+.- +.......+..+....|..|++.|||| .|
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a---~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpG---Vg 183 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA---KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPG---VG 183 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC---CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCc---cc
Confidence 567777765 999999888764443 3445666665542211 111223445666667899999999999 33
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcC-CCCCCcEEEEEeChhHHHHHHHHhcC
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQR 656 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~~ 656 (783)
+..|.. +......|..++++||.++. .+.+++|.+.|+|.||.+++.++.++
T Consensus 184 ---~S~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 184 ---SSTGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred ---cCCCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 222222 33556889999999999753 46889999999999999988877664
|
|
| >KOG1516|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.7e-05 Score=92.01 Aligned_cols=127 Identities=22% Similarity=0.241 Sum_probs=83.9
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHH-HHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc-CCcCh
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL-KKQNC 615 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~-~~~~~ 615 (783)
+..-++.|+.....+ .|+++|+|||.-.... ..|... ....+..+..+|+.++||-|- +| |...+... .+...
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~~~gN~g 172 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSAAPGNLG 172 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCCCCCccc
Confidence 456666776542222 8999999998332222 112111 123444558999999999752 33 22222111 23345
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEEcCCcc
Q psy2521 616 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGAL 670 (783)
Q Consensus 616 ~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~~~~~~ 670 (783)
+.|.+.|++|+.+. -..||++|.|+|+|+||..+..++.. | .||+.+|+.+|..
T Consensus 173 l~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~S-p~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 173 LFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLS-PHSRGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcC-HhhHHHHHHHHhhcccc
Confidence 67999999999764 33699999999999999999887753 4 4899999888753
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0014 Score=73.46 Aligned_cols=203 Identities=10% Similarity=0.124 Sum_probs=122.8
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
..++..++.||||++||-. .+...+.|||..+|..... +-+....+.+.|+.+|+.++-++.|.
T Consensus 350 ~~~i~~l~YSpDgq~iaTG-----~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDG---------- 414 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATG-----AEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDG---------- 414 (893)
T ss_pred ccceeeEEECCCCcEEEec-----cCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCC----------
Confidence 4568889999999999964 3446799999999875431 11222346899999998887776442
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.|..|++..-.. -..|..|. +..+..++..|.|.-+.... .+..+|+++++.+|. ...+
T Consensus 415 ------tVRAwDlkRYrN--fRTft~P~-p~QfscvavD~sGelV~AG~---~d~F~IfvWS~qTGq---------llDi 473 (893)
T KOG0291|consen 415 ------TVRAWDLKRYRN--FRTFTSPE-PIQFSCVAVDPSGELVCAGA---QDSFEIFVWSVQTGQ---------LLDI 473 (893)
T ss_pred ------eEEeeeecccce--eeeecCCC-ceeeeEEEEcCCCCEEEeec---cceEEEEEEEeecCe---------eeeh
Confidence 455566543221 12344444 33455677788887654322 345899999999962 2335
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
+.+.++... .++|+|+.|+-.+-. ..|-.+++=... . ..+-++.. ..++.....++|+.|.+...+. +
T Consensus 474 LsGHEgPVs~l~f~~~~~~LaS~SWD----kTVRiW~if~s~-~-~vEtl~i~-sdvl~vsfrPdG~elaVaTldg---q 543 (893)
T KOG0291|consen 474 LSGHEGPVSGLSFSPDGSLLASGSWD----KTVRIWDIFSSS-G-TVETLEIR-SDVLAVSFRPDGKELAVATLDG---Q 543 (893)
T ss_pred hcCCCCcceeeEEccccCeEEecccc----ceEEEEEeeccC-c-eeeeEeec-cceeEEEEcCCCCeEEEEEecc---e
Confidence 566665544 489999977754432 224444542211 0 12233333 3445444555667788776653 5
Q ss_pred EEEEECCCCcee
Q psy2521 445 MDLHDLNTGKRL 456 (783)
Q Consensus 445 l~~~dl~~G~~~ 456 (783)
|-.||...+..+
T Consensus 544 Itf~d~~~~~q~ 555 (893)
T KOG0291|consen 544 ITFFDIKEAVQV 555 (893)
T ss_pred EEEEEhhhceee
Confidence 777777555443
|
|
| >PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.2e-05 Score=76.88 Aligned_cols=168 Identities=18% Similarity=0.213 Sum_probs=76.7
Q ss_pred CccEEEEecCCCCCccCCcCcHH---HHHHHHcCCEEEEEecCCC----CC----------------CCChhHHhhcccc
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSIS---RCMFLRHFNGIYAIPNIRG----GG----------------ELGEDWHNAGRLL 610 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~---~~~~l~~~G~~v~~~~~RG----~g----------------~~G~~~~~~g~~~ 610 (783)
+.+-||++||...+... |... +...|.+.++-++.+|-.- +. +....|......
T Consensus 3 ~k~riLcLHG~~~na~i--f~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEI--FRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--HHH--HHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCHHH--HHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC-
Confidence 46789999997655433 3222 3344442267777776421 11 112233332211
Q ss_pred CCcChHHHHHHHHHHHH----HcCCCCCCcEEEEEeChhHHHHHHHHhcC--------CCceeEEEEcCCcchhhhcccc
Q psy2521 611 KKQNCFDDFQAAAEYMI----NKKYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLRFNKF 678 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~----~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~lf~a~i~~~~~~d~~~~~~~ 678 (783)
.....++..++++|. +.|-.| ||+|+|.||.+++.++.+. .-.|+.+|..+|+.-....
T Consensus 80 --~~~~~~~~~sl~~l~~~i~~~GPfd----GvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--- 150 (212)
T PF03959_consen 80 --DHEYEGLDESLDYLRDYIEENGPFD----GVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--- 150 (212)
T ss_dssp --SGGG---HHHHHHHHHHHHHH---S----EEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----
T ss_pred --cccccCHHHHHHHHHHHHHhcCCeE----EEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---
Confidence 122445555555554 345444 9999999999998887431 1246888887775521100
Q ss_pred cccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 679 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 679 ~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
+..+. ... .+..| +|-++|.+|..|++..+.++++..... .
T Consensus 151 ------------------------~~~~~-~~~---~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~----------~ 191 (212)
T PF03959_consen 151 ------------------------YQELY-DEP---KISIP-TLHVIGENDPVVPPERSEALAEMFDPD----------A 191 (212)
T ss_dssp ------------------------GTTTT---T---T---E-EEEEEETT-SSS-HHHHHHHHHHHHHH----------E
T ss_pred ------------------------hhhhh-ccc---cCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC----------c
Confidence 00111 111 15666 999999999999999999998887651 2
Q ss_pred EEEEeCCCCccCCcc
Q psy2521 759 LLRVEQDAGHGQGKA 773 (783)
Q Consensus 759 ~l~~~~~~gHg~~~~ 773 (783)
.+.. -+.||.+...
T Consensus 192 ~v~~-h~gGH~vP~~ 205 (212)
T PF03959_consen 192 RVIE-HDGGHHVPRK 205 (212)
T ss_dssp EEEE-ESSSSS----
T ss_pred EEEE-ECCCCcCcCC
Confidence 3444 4679987543
|
It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A. |
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00053 Score=72.52 Aligned_cols=204 Identities=11% Similarity=0.080 Sum_probs=113.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
++..+.+|||++.||+.-. ...|+++-..|++.+.-..-+...+.+.|+-||+.|+.+..
T Consensus 305 ~~e~FeVShd~~fia~~G~-----~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~--------------- 364 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAGN-----NGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGG--------------- 364 (514)
T ss_pred hhheeEecCCCCeEEEccc-----CceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcC---------------
Confidence 5778999999999988632 25699999999987643322333479999999988876651
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
..+||.++|++..... .|... +.....+++.|++|+|++.-+.. .-+-++|..+-.... ...|.. .+..
T Consensus 365 -~GeV~v~nl~~~~~~~--rf~D~-G~v~gts~~~S~ng~ylA~GS~~----GiVNIYd~~s~~~s~--~PkPik-~~dN 433 (514)
T KOG2055|consen 365 -TGEVYVWNLRQNSCLH--RFVDD-GSVHGTSLCISLNGSYLATGSDS----GIVNIYDGNSCFAST--NPKPIK-TVDN 433 (514)
T ss_pred -CceEEEEecCCcceEE--EEeec-CccceeeeeecCCCceEEeccCc----ceEEEeccchhhccC--CCCchh-hhhh
Confidence 2379999998763221 22221 12244578899999999864332 344455533200000 011111 1111
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
..-... .|+||++-|.+.++..-...+|+.+.--+ ...+|.+.-. .-..+-.-.+++. +..+....+.|+-.|+.
T Consensus 434 Ltt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T-VFsNfP~~n~-~vg~vtc~aFSP~-sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 434 LTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT-VFSNFPTSNT-KVGHVTCMAFSPN-SGYLAVGNEAGRVHLFK 510 (514)
T ss_pred hheeeeeeeeCcchhhhhhhhhccccceEEEecccee-eeccCCCCCC-cccceEEEEecCC-CceEEeecCCCceeeEe
Confidence 111122 59999998888777544445666554322 2223432211 1122222233444 44444455665444443
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.0021 Score=64.99 Aligned_cols=256 Identities=14% Similarity=0.107 Sum_probs=130.6
Q ss_pred eCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc-----cccccccccccCeeEEeeCCCEEEEE
Q psy2521 198 LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-----DYPEVLKNVKFPSISWTHDHKGFFYN 272 (783)
Q Consensus 198 lD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~-----~~~~~~~~~~~~~~~WspDg~~l~y~ 272 (783)
++.+.|.. +.-.+.+++||.|||+||-.... ..|++|++..=+ .+....+-...+.+.|+||-+.|++.
T Consensus 77 l~~~~LKg-H~~~vt~~~FsSdGK~lat~~~D-----r~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~ 150 (420)
T KOG2096|consen 77 LNVSVLKG-HKKEVTDVAFSSDGKKLATISGD-----RSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVS 150 (420)
T ss_pred hhhhhhhc-cCCceeeeEEcCCCceeEEEeCC-----ceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEE
Confidence 45566642 23458899999999999977642 679999986522 12223332234678999999999887
Q ss_pred EeecCCCCCCCCcccccCCceEEEEEcCCCC---------CCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcE
Q psy2521 273 QYCDINGTADGTETTAHMGQKIYYHVLGTEQ---------DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 343 (783)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~---------~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~ 343 (783)
-.. ...|+.+.+.... ..|-+-|++.... -..++.....+++|+-. + ..++
T Consensus 151 ~~~---------------g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v-~~i~iGiA~~~k~imsa-s---~dt~ 210 (420)
T KOG2096|consen 151 VKR---------------GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQV-DIINIGIAGNAKYIMSA-S---LDTK 210 (420)
T ss_pred Ecc---------------CCEEEEEEeeecccCCCCcccccccccccchhccc-ceEEEeecCCceEEEEe-c---CCCc
Confidence 732 2345555442110 0111112222111 13456666677777632 2 2378
Q ss_pred EEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCC-CCCCCCcEEeecCC--CC
Q psy2521 344 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLN-NPCEKNWKTLIPED--EN 419 (783)
Q Consensus 344 l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~-~~~~~~~~~li~~~--~~ 419 (783)
|.++++.+. .+ ..+-...-..+ ..+||+|+.+... .- .+.-++|.+=.. .+.......++.-. ..
T Consensus 211 i~lw~lkGq---~L------~~idtnq~~n~~aavSP~GRFia~~-gF-TpDVkVwE~~f~kdG~fqev~rvf~LkGH~s 279 (420)
T KOG2096|consen 211 ICLWDLKGQ---LL------QSIDTNQSSNYDAAVSPDGRFIAVS-GF-TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS 279 (420)
T ss_pred EEEEecCCc---ee------eeeccccccccceeeCCCCcEEEEe-cC-CCCceEEEEEeccCcchhhhhhhheeccchh
Confidence 999999862 11 11111111122 2699998866542 22 233344433221 12211122222111 12
Q ss_pred ceEEEEEEeeCCEEEEEEecCCeeEEEEEECC-----CCceeeeecCC---CeE-EEeeeccccccEEEEEEecCCCCce
Q psy2521 420 RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-----TGKRLHSFPLD---LGQ-ITHISGRRKYNEVFYGFTSFLQPGT 490 (783)
Q Consensus 420 ~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~-----~G~~~~~l~~~---~g~-v~~~s~~~d~~~l~~~~ss~~~P~~ 490 (783)
.++ ++.+.++..-+++..+||.-+|+=.|.+ +-+.+++.+.| .|. --.++.+|.++.+.+++.| +
T Consensus 280 aV~-~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs-----~ 353 (420)
T KOG2096|consen 280 AVL-AAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS-----D 353 (420)
T ss_pred hee-eeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCC-----c
Confidence 333 3333443566677788886665533331 22223333222 121 1246677888888887765 4
Q ss_pred EEEEeC
Q psy2521 491 IYHCNI 496 (783)
Q Consensus 491 vy~~d~ 496 (783)
+..+..
T Consensus 354 l~~~~s 359 (420)
T KOG2096|consen 354 LKVFAS 359 (420)
T ss_pred eEEEEc
Confidence 555555
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.02 Score=59.24 Aligned_cols=231 Identities=11% Similarity=0.115 Sum_probs=125.2
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.-++....||-||.+||-. .=...|.|+..++|.........+ ...=+.|.|-+..|+....
T Consensus 106 KDSVt~~~FshdgtlLATG-----dmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~------------ 168 (399)
T KOG0296|consen 106 KDSVTCCSFSHDGTLLATG-----DMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST------------ 168 (399)
T ss_pred CCceEEEEEccCceEEEec-----CCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC------------
Confidence 4578899999999999843 223569999999987543221111 1123568897766665552
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC------C
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG------K 360 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~------~ 360 (783)
...||.+.++.. ....++.....+ -....++||||.|+-... ...|.++++.+|.. ..+. .
T Consensus 169 ----DGsvWmw~ip~~--~~~kv~~Gh~~~--ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg~p-~~~~~~~e~~~ 235 (399)
T KOG0296|consen 169 ----DGSVWMWQIPSQ--ALCKVMSGHNSP--CTCGEFIPDGKRILTGYD----DGTIIVWNPKTGQP-LHKITQAEGLE 235 (399)
T ss_pred ----CCcEEEEECCCc--ceeeEecCCCCC--cccccccCCCceEEEEec----CceEEEEecCCCce-eEEecccccCc
Confidence 236999999864 334566654332 134568999999975433 35788888877521 0000 0
Q ss_pred CCce-------eeecCccce-eEEEEeeCCEEEEEECC------------------------------CCCCceEEEEcC
Q psy2521 361 FPLK-------TVIPGMDHH-HEIIANNGPELIVKTTK------------------------------NAPKGKVVTINL 402 (783)
Q Consensus 361 ~~~~-------~l~~~~~~~-~~~~s~dg~~l~~~t~~------------------------------~~~~~~L~~~d~ 402 (783)
.++. .++.+.... .........++.+..|. +.-.++|..+|+
T Consensus 236 ~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~ 315 (399)
T KOG0296|consen 236 LPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDL 315 (399)
T ss_pred CCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEec
Confidence 0110 111111111 11111111223332221 011245666666
Q ss_pred CCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeecccccc
Q psy2521 403 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN 476 (783)
Q Consensus 403 ~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~ 476 (783)
+... .+.+.++. ..++.-.|... ..|+. .-.+ ..|+.||..+|+.+...+.....|-.|..+++.+
T Consensus 316 a~~~---~R~~c~he-~~V~~l~w~~t-~~l~t-~c~~--g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~ 381 (399)
T KOG0296|consen 316 AAST---LRHICEHE-DGVTKLKWLNT-DYLLT-ACAN--GKVRQWDARTGQLKFTYTGHQMGILDFALSPQKR 381 (399)
T ss_pred ccch---hheeccCC-CceEEEEEcCc-chhee-eccC--ceEEeeeccccceEEEEecCchheeEEEEcCCCc
Confidence 5543 44555554 34554444442 44443 3333 3688888888887777766644555676676554
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0011 Score=71.20 Aligned_cols=209 Identities=16% Similarity=0.114 Sum_probs=113.1
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCC-----CCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEE
Q psy2521 163 PQRQENNYFYFHNKGLQNHSILYVQRNLT-----GSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTL 237 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~~~~~l~~~~~~~-----g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i 237 (783)
.++.|+.+.... +..|..|+-|++.. .+.+-+.|.+. .+++...|...+|.|+.+-...+.+..| ++
T Consensus 222 ys~Tg~~iLvvs---g~aqakl~DRdG~~~~e~~KGDQYI~Dm~n-TKGHia~lt~g~whP~~k~~FlT~s~Dg----tl 293 (641)
T KOG0772|consen 222 YSVTGDQILVVS---GSAQAKLLDRDGFEIVEFSKGDQYIRDMYN-TKGHIAELTCGCWHPDNKEEFLTCSYDG----TL 293 (641)
T ss_pred ecCCCCeEEEEe---cCcceeEEccCCceeeeeeccchhhhhhhc-cCCceeeeeccccccCcccceEEecCCC----cE
Confidence 344566655544 34567777665321 01122333321 1234566888999999999988887665 48
Q ss_pred EEEECCCCcc-cc------ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEE
Q psy2521 238 HIKDVDTGKD-YP------EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 310 (783)
Q Consensus 238 ~v~Dl~tg~~-~~------~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~ 310 (783)
++||+..-+. ++ .....+....-+|+|||+.|+-...+ ..|..|+.+.-.......+
T Consensus 294 RiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D----------------GSIQ~W~~~~~~v~p~~~v 357 (641)
T KOG0772|consen 294 RIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD----------------GSIQIWDKGSRTVRPVMKV 357 (641)
T ss_pred EEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccC----------------CceeeeecCCcccccceEe
Confidence 9999865432 11 11122334678999999987654422 2355556544332222222
Q ss_pred ecCCCC-eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEEC
Q psy2521 311 EFPNGR-SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTT 389 (783)
Q Consensus 311 ~~~~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~ 389 (783)
...+.+ .-+..+.+|+||++|+- ++ ....|.++||..- ...+. .+.-|...+......||||.+ |++...
T Consensus 358 k~AH~~g~~Itsi~FS~dg~~LlS---Rg-~D~tLKvWDLrq~-kkpL~---~~tgL~t~~~~tdc~FSPd~k-li~TGt 428 (641)
T KOG0772|consen 358 KDAHLPGQDITSISFSYDGNYLLS---RG-FDDTLKVWDLRQF-KKPLN---VRTGLPTPFPGTDCCFSPDDK-LILTGT 428 (641)
T ss_pred eeccCCCCceeEEEeccccchhhh---cc-CCCceeeeecccc-ccchh---hhcCCCccCCCCccccCCCce-EEEecc
Confidence 222222 13468899999999983 32 3367888998762 22111 122233333434446999854 555432
Q ss_pred C---CCCCceEEEEcCCC
Q psy2521 390 K---NAPKGKVVTINLNN 404 (783)
Q Consensus 390 ~---~~~~~~L~~~d~~~ 404 (783)
. +...+.|+.+|..+
T Consensus 429 S~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 429 SAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred cccCCCCCceEEEEeccc
Confidence 1 12223566666543
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00038 Score=70.11 Aligned_cols=201 Identities=13% Similarity=0.203 Sum_probs=106.7
Q ss_pred eEEEEEEECCCCccccc----cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeE
Q psy2521 234 WNTLHIKDVDTGKDYPE----VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV 309 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~----~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v 309 (783)
...|.||.+.||..+.. ...++ ..+.||.|+..|+-.++ .+.+.+|-+.++. ++
T Consensus 284 DGkIKvWri~tG~ClRrFdrAHtkGv--t~l~FSrD~SqiLS~sf----------------D~tvRiHGlKSGK----~L 341 (508)
T KOG0275|consen 284 DGKIKVWRIETGQCLRRFDRAHTKGV--TCLSFSRDNSQILSASF----------------DQTVRIHGLKSGK----CL 341 (508)
T ss_pred CCcEEEEEEecchHHHHhhhhhccCe--eEEEEccCcchhhcccc----------------cceEEEeccccch----hH
Confidence 34566666666654431 11122 45677777776665443 3467788776542 22
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEEC
Q psy2521 310 VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTT 389 (783)
Q Consensus 310 ~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~ 389 (783)
-+...+..|...+.+++||.+|+-.+++ ..+.+++..++++ +. .++.+-.+.....-..-|.+..-+++.|
T Consensus 342 KEfrGHsSyvn~a~ft~dG~~iisaSsD----gtvkvW~~KtteC--~~---Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 342 KEFRGHSSYVNEATFTDDGHHIISASSD----GTVKVWHGKTTEC--LS---TFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred HHhcCccccccceEEcCCCCeEEEecCC----ccEEEecCcchhh--hh---hccCCCCcccceeEEEcCCCCceEEEEc
Confidence 2222334466678899999998754433 4577777766322 11 1111111111100123344444555677
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCC---CCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEE
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPED---ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQI 466 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~---~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v 466 (783)
+. ..||.+++.+.- ..-+..+ .++.+....++.|.++|....+. .+|-+...+|+..+.++...-.+
T Consensus 413 rs---ntv~imn~qGQv----VrsfsSGkREgGdFi~~~lSpkGewiYcigED~---vlYCF~~~sG~LE~tl~VhEkdv 482 (508)
T KOG0275|consen 413 RS---NTVYIMNMQGQV----VRSFSSGKREGGDFINAILSPKGEWIYCIGEDG---VLYCFSVLSGKLERTLPVHEKDV 482 (508)
T ss_pred CC---CeEEEEeccceE----EeeeccCCccCCceEEEEecCCCcEEEEEccCc---EEEEEEeecCceeeeeecccccc
Confidence 64 248888876532 2222222 13445556667766776655433 57777777898767666543333
Q ss_pred Eeeeccccc
Q psy2521 467 THISGRRKY 475 (783)
Q Consensus 467 ~~~s~~~d~ 475 (783)
.++.-.|..
T Consensus 483 IGl~HHPHq 491 (508)
T KOG0275|consen 483 IGLTHHPHQ 491 (508)
T ss_pred cccccCccc
Confidence 355444443
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0077 Score=67.69 Aligned_cols=237 Identities=13% Similarity=0.105 Sum_probs=138.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-cccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+...++.+--+.||...+. | ..+++++.+-..+ .+.+...+...++|.--|++|++....
T Consensus 268 vtaa~fH~~t~~lvvgFss-G----~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~k-------------- 328 (893)
T KOG0291|consen 268 VTAAAFHKGTNLLVVGFSS-G----EFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSK-------------- 328 (893)
T ss_pred eeeeeccCCceEEEEEecC-C----eeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCc--------------
Confidence 3445555555555544432 2 2334444433322 233444445688998889999998721
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
-.+|-+|..-+.. .|+.-..+-.-...+++||||+.|+- +.+..+|.++|...|-+ ..+ +.+
T Consensus 329 -lgQLlVweWqsEs----YVlKQQgH~~~i~~l~YSpDgq~iaT----G~eDgKVKvWn~~SgfC--------~vT-Fte 390 (893)
T KOG0291|consen 329 -LGQLLVWEWQSES----YVLKQQGHSDRITSLAYSPDGQLIAT----GAEDGKVKVWNTQSGFC--------FVT-FTE 390 (893)
T ss_pred -cceEEEEEeeccc----eeeeccccccceeeEEECCCCcEEEe----ccCCCcEEEEeccCceE--------EEE-ecc
Confidence 2244444443221 23222111112457899999999983 34457899999877421 111 222
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
...+.. .|+.+|+.++ .+.-+ +.+-.+|+..-. +.++.+.+. ......+.....+-|++....+. -.|++
T Consensus 391 Hts~Vt~v~f~~~g~~ll-ssSLD---GtVRAwDlkRYr--NfRTft~P~-p~QfscvavD~sGelV~AG~~d~-F~Ifv 462 (893)
T KOG0291|consen 391 HTSGVTAVQFTARGNVLL-SSSLD---GTVRAWDLKRYR--NFRTFTSPE-PIQFSCVAVDPSGELVCAGAQDS-FEIFV 462 (893)
T ss_pred CCCceEEEEEEecCCEEE-EeecC---CeEEeeeecccc--eeeeecCCC-ceeeeEEEEcCCCCEEEeeccce-EEEEE
Confidence 333333 4787776554 44443 457788886533 466666554 33333344433366777776664 67999
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|++++|+.+..|....|.|++++.+++++.++ -.||.. +|-+||+
T Consensus 463 WS~qTGqllDiLsGHEgPVs~l~f~~~~~~La--S~SWDk--TVRiW~i 507 (893)
T KOG0291|consen 463 WSVQTGQLLDILSGHEGPVSGLSFSPDGSLLA--SGSWDK--TVRIWDI 507 (893)
T ss_pred EEeecCeeeehhcCCCCcceeeEEccccCeEE--eccccc--eEEEEEe
Confidence 99999998877777788898888888887544 346653 5666665
|
|
| >KOG3847|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00024 Score=71.86 Aligned_cols=111 Identities=23% Similarity=0.295 Sum_probs=70.3
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCC--------------CCChhHHhhccccC--C---
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG--------------ELGEDWHNAGRLLK--K--- 612 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g--------------~~G~~~~~~g~~~~--~--- 612 (783)
++++|+||+.||-.+...- |+ ...--|+.+||+|+++..|-.+ .+-+.|...-.... +
T Consensus 115 ~~k~PvvvFSHGLggsRt~--YS-a~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTL--YS-AYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCccEEEEecccccchhh--HH-HHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 6789999999996554432 33 3344467789999999999743 11223332111100 0
Q ss_pred -cCh-----HHHHHHHHHHHHH---------------------cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 613 -QNC-----FDDFQAAAEYMIN---------------------KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 613 -~~~-----~~D~~a~~~~l~~---------------------~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
+|. ...+..|++-|.+ ++.+|-.+++|+|||.||..+.+....+ ..|+++|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeee
Confidence 111 2344444444432 2446778999999999999999888764 46888886
Q ss_pred c
Q psy2521 666 L 666 (783)
Q Consensus 666 ~ 666 (783)
.
T Consensus 271 l 271 (399)
T KOG3847|consen 271 L 271 (399)
T ss_pred e
Confidence 4
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0025 Score=66.93 Aligned_cols=230 Identities=12% Similarity=0.061 Sum_probs=133.2
Q ss_pred CcEEEeeEEECCC--CcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 207 GTTALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 207 g~~~l~~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
++..++++.|+|. +.-||-.. .+ .++.+|++++-..+.+ +-...+.+.++|.|+|+.|.-.++|..
T Consensus 216 H~~~v~~~~fhP~~~~~~lat~s-~D----gtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~t------ 284 (459)
T KOG0272|consen 216 HTSRVGAAVFHPVDSDLNLATAS-AD----GTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDST------ 284 (459)
T ss_pred cccceeeEEEccCCCccceeeec-cC----CceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccc------
Confidence 3456899999998 44555332 22 4588999888666553 333446688999999999987776531
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
-.+|++.++.. ++..+.... -..+++|-+||.-++-. .-.+--.++|+.+|.. .
T Consensus 285 ----------WRlWD~~tk~E---lL~QEGHs~-~v~~iaf~~DGSL~~tG----GlD~~~RvWDlRtgr~--------i 338 (459)
T KOG0272|consen 285 ----------WRLWDLETKSE---LLLQEGHSK-GVFSIAFQPDGSLAATG----GLDSLGRVWDLRTGRC--------I 338 (459)
T ss_pred ----------hhhcccccchh---hHhhccccc-ccceeEecCCCceeecc----CccchhheeecccCcE--------E
Confidence 22456666532 444443322 34689999999866521 1123345678887521 1
Q ss_pred eeeecCcc-ceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecC
Q psy2521 364 KTVIPGMD-HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQN 440 (783)
Q Consensus 364 ~~l~~~~~-~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~ 440 (783)
-.+.+.. .-+. .|+|+|-.|.--+ .+ ...-.+|+.... ..-++|..... +..+.+. ..+.++++..-|
T Consensus 339 -m~L~gH~k~I~~V~fsPNGy~lATgs-~D---nt~kVWDLR~r~---~ly~ipAH~nl-VS~Vk~~p~~g~fL~TasyD 409 (459)
T KOG0272|consen 339 -MFLAGHIKEILSVAFSPNGYHLATGS-SD---NTCKVWDLRMRS---ELYTIPAHSNL-VSQVKYSPQEGYFLVTASYD 409 (459)
T ss_pred -EEecccccceeeEeECCCceEEeecC-CC---CcEEEeeecccc---cceecccccch-hhheEecccCCeEEEEcccC
Confidence 1222322 2233 4999986665322 21 224445654433 12344443233 3333333 346666666655
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFL 486 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~ 486 (783)
. .+.+|...+...++.+....+-|.++..++++..+. .+++.
T Consensus 410 ~--t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~--t~s~D 451 (459)
T KOG0272|consen 410 N--TVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIA--TSSFD 451 (459)
T ss_pred c--ceeeecCCCcccchhhcCCccceEEEEeccCCceEE--EeccC
Confidence 4 456666667777777877777787888888775433 33444
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00023 Score=72.09 Aligned_cols=143 Identities=16% Similarity=0.091 Sum_probs=89.0
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
.++||+|++||-..+ +.+.|.|.+|=+..+.-.---+...+.|+.|+-.+.-..+.++ .
T Consensus 14 c~fSp~g~yiAs~~~------yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~---------------~ 72 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSR------YRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDP---------------K 72 (447)
T ss_pred eeECCCCCeeeeeee------eEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccc---------------e
Confidence 689999999997764 6899999988765543221112367899999988887775432 4
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH 373 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~ 373 (783)
|..+.|..+ +-..-.++. +.-.....||||||.|+..+.- ..+|-++.+.+...- -.++. ...-.+
T Consensus 73 vqvwsl~Qp--ew~ckIdeg--~agls~~~WSPdgrhiL~tseF---~lriTVWSL~t~~~~----~~~~p---K~~~kg 138 (447)
T KOG4497|consen 73 VQVWSLVQP--EWYCKIDEG--QAGLSSISWSPDGRHILLTSEF---DLRITVWSLNTQKGY----LLPHP---KTNVKG 138 (447)
T ss_pred EEEEEeecc--eeEEEeccC--CCcceeeeECCCcceEeeeecc---eeEEEEEEeccceeE----Eeccc---ccCcee
Confidence 666666543 211211221 1123678999999999876432 267777777662110 11111 111122
Q ss_pred eEEEEeeCCEEEEEECCCC
Q psy2521 374 HEIIANNGPELIVKTTKNA 392 (783)
Q Consensus 374 ~~~~s~dg~~l~~~t~~~~ 392 (783)
+ .+.+||+...+.+.++-
T Consensus 139 ~-~f~~dg~f~ai~sRrDC 156 (447)
T KOG4497|consen 139 Y-AFHPDGQFCAILSRRDC 156 (447)
T ss_pred E-EECCCCceeeeeecccH
Confidence 2 48899999888887753
|
|
| >COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00051 Score=64.37 Aligned_cols=111 Identities=17% Similarity=0.227 Sum_probs=77.3
Q ss_pred ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhh
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEF 688 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~ 688 (783)
..+....++|-++.++.-+.. . ++.+.|++||.|+.+++..+.+.-...+++++.+|.- .-+
T Consensus 36 ~~w~~P~~~dWi~~l~~~v~a--~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~-------------- 97 (181)
T COG3545 36 DDWEAPVLDDWIARLEKEVNA--A-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSR-------------- 97 (181)
T ss_pred CCCCCCCHHHHHHHHHHHHhc--c-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-ccc--------------
Confidence 455566788888887765543 2 4459999999999999999987655677777777632 111
Q ss_pred CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhh
Q psy2521 689 GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747 (783)
Q Consensus 689 g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~ 747 (783)
|.. ....+..++|+...+. ..| .+++++.+|+.|+++++..++.+.-..
T Consensus 98 --~~~--~~~~~~tf~~~p~~~l-----pfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~ 146 (181)
T COG3545 98 --PEI--RPKHLMTFDPIPREPL-----PFP-SVVVASRNDPYVSYEHAEDLANAWGSA 146 (181)
T ss_pred --ccc--chhhccccCCCccccC-----CCc-eeEEEecCCCCCCHHHHHHHHHhccHh
Confidence 110 0122345566654443 456 899999999999999999998887655
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0059 Score=62.02 Aligned_cols=223 Identities=13% Similarity=0.155 Sum_probs=132.3
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+.-+.|-.....+.++... . ..+|+.+++.+.+.++--.+.. ...++.-+|-++.|+-++.|
T Consensus 58 G~~~~~Fth~~~~~i~sStk-~--d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D------------- 121 (311)
T KOG1446|consen 58 GVDLACFTHHSNTVIHSSTK-E--DDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLD------------- 121 (311)
T ss_pred cccEEEEecCCceEEEccCC-C--CCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccC-------------
Confidence 34556666666667776652 2 2689999999988765332221 23577888988877655543
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI- 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~- 367 (783)
..|++|++.+..-+-.+.. ...+ -+++.|.|-..|+.. ....|.++|+..- ...|.....
T Consensus 122 ---~tvrLWDlR~~~cqg~l~~--~~~p----i~AfDp~GLifA~~~----~~~~IkLyD~Rs~------dkgPF~tf~i 182 (311)
T KOG1446|consen 122 ---KTVRLWDLRVKKCQGLLNL--SGRP----IAAFDPEGLIFALAN----GSELIKLYDLRSF------DKGPFTTFSI 182 (311)
T ss_pred ---CeEEeeEecCCCCceEEec--CCCc----ceeECCCCcEEEEec----CCCeEEEEEeccc------CCCCceeEcc
Confidence 3688888876543322222 2212 367899996665442 2248889998652 112232222
Q ss_pred -cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 368 -PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 368 -~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
.+....|. -|||||+.+++.++. ..++.+|.=.+....-...-+......+.....++ +..++....+| +
T Consensus 183 ~~~~~~ew~~l~FS~dGK~iLlsT~~----s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPd-s~Fvl~gs~dg--~ 255 (311)
T KOG1446|consen 183 TDNDEAEWTDLEFSPDGKSILLSTNA----SFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPD-SKFVLSGSDDG--T 255 (311)
T ss_pred CCCCccceeeeEEcCCCCEEEEEeCC----CcEEEEEccCCcEeeeEeeccCCCCcceeEEECCC-CcEEEEecCCC--c
Confidence 12233444 499999999988765 34777776554411111222222223345545565 67777777665 7
Q ss_pred EEEEECCCCceeeeecCC-CeEEEeeecccc
Q psy2521 445 MDLHDLNTGKRLHSFPLD-LGQITHISGRRK 474 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d 474 (783)
|.+|++++|+.+..+..| .+.+.-+.++|.
T Consensus 256 i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446|consen 256 IHVWNLETGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred EEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence 888899999987777665 444544445554
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00081 Score=69.52 Aligned_cols=175 Identities=13% Similarity=0.105 Sum_probs=101.1
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
-...|||||++|+-.+ ....+.+|++.|... ++.-..+..|...++|||||++|+ .
T Consensus 119 l~~~fsp~g~~l~tGs----------------GD~TvR~WD~~TeTp----~~t~KgH~~WVlcvawsPDgk~iA----S 174 (480)
T KOG0271|consen 119 LSVQFSPTGSRLVTGS----------------GDTTVRLWDLDTETP----LFTCKGHKNWVLCVAWSPDGKKIA----S 174 (480)
T ss_pred EEEEecCCCceEEecC----------------CCceEEeeccCCCCc----ceeecCCccEEEEEEECCCcchhh----c
Confidence 3678999999887554 234688888887532 333344456888999999999997 3
Q ss_pred CCCCcEEEEEECCCCCCC--cccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe
Q psy2521 338 NTQGSDLHYFDLHSLPDG--KISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~--~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l 413 (783)
+.-.+.|.++|.++|..- .++...+|...+ .++ ...|..++|. .+.+ .+.+..+|+..+. ....+
T Consensus 175 G~~dg~I~lwdpktg~~~g~~l~gH~K~It~L-----awep~hl~p~~r~la-s~sk---Dg~vrIWd~~~~~--~~~~l 243 (480)
T KOG0271|consen 175 GSKDGSIRLWDPKTGQQIGRALRGHKKWITAL-----AWEPLHLVPPCRRLA-SSSK---DGSVRIWDTKLGT--CVRTL 243 (480)
T ss_pred cccCCeEEEecCCCCCcccccccCcccceeEE-----eecccccCCCcccee-cccC---CCCEEEEEccCce--EEEEe
Confidence 334479999998875210 111111111100 011 1234444333 2333 3347777776543 11222
Q ss_pred ecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeecc
Q psy2521 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGR 472 (783)
Q Consensus 414 i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~ 472 (783)
..+ ...+.-+.+.+ ..++++...|. .|.+|+..+|+..+.+....-.|..++.+
T Consensus 244 sgH--T~~VTCvrwGG-~gliySgS~Dr--tIkvw~a~dG~~~r~lkGHahwvN~lals 297 (480)
T KOG0271|consen 244 SGH--TASVTCVRWGG-EGLIYSGSQDR--TIKVWRALDGKLCRELKGHAHWVNHLALS 297 (480)
T ss_pred ccC--ccceEEEEEcC-CceEEecCCCc--eEEEEEccchhHHHhhcccchheeeeecc
Confidence 222 34445556554 67777777775 57777877898877777654345555554
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.015 Score=70.73 Aligned_cols=237 Identities=15% Similarity=0.142 Sum_probs=123.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc----cc--c--ccccccccCeeEEeeCCCEEEEEEeecCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DY--P--EVLKNVKFPSISWTHDHKGFFYNQYCDINGT 280 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~----~~--~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 280 (783)
..+..++|||||++||-+.. ...|+|||+.+.. .. + ..........++|+|..+.++.+..
T Consensus 484 ~~V~~i~fs~dg~~latgg~-----D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~------ 552 (793)
T PLN00181 484 NLVCAIGFDRDGEFFATAGV-----NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSN------ 552 (793)
T ss_pred CcEEEEEECCCCCEEEEEeC-----CCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEe------
Confidence 34778999999999886532 2579999976421 10 0 0111223357899886444444441
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 359 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~ 359 (783)
....|.+|++.+.+ .+..+.. +......+.|+| |+..|+-.. ....|.++|+.++.
T Consensus 553 ---------~Dg~v~lWd~~~~~--~~~~~~~--H~~~V~~l~~~p~~~~~L~Sgs----~Dg~v~iWd~~~~~------ 609 (793)
T PLN00181 553 ---------FEGVVQVWDVARSQ--LVTEMKE--HEKRVWSIDYSSADPTLLASGS----DDGSVKLWSINQGV------ 609 (793)
T ss_pred ---------CCCeEEEEECCCCe--EEEEecC--CCCCEEEEEEcCCCCCEEEEEc----CCCEEEEEECCCCc------
Confidence 12368888886542 2222222 223456889997 677665432 23579999997731
Q ss_pred CCCceeeecCccceeE-EEE-eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEE
Q psy2521 360 KFPLKTVIPGMDHHHE-IIA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 360 ~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~ 437 (783)
....+. ....... .|. ++|..|+..+ . ++.|..+|+..... ....+..+. ..+..+.+.+ +..+++.
T Consensus 610 --~~~~~~-~~~~v~~v~~~~~~g~~latgs-~---dg~I~iwD~~~~~~-~~~~~~~h~--~~V~~v~f~~-~~~lvs~ 678 (793)
T PLN00181 610 --SIGTIK-TKANICCVQFPSESGRSLAFGS-A---DHKVYYYDLRNPKL-PLCTMIGHS--KTVSYVRFVD-SSTLVSS 678 (793)
T ss_pred --EEEEEe-cCCCeEEEEEeCCCCCEEEEEe-C---CCeEEEEECCCCCc-cceEecCCC--CCEEEEEEeC-CCEEEEE
Confidence 111111 1111112 353 4566555433 2 34688899865431 123333332 3344455555 4445555
Q ss_pred ecCCeeEEEEEECCCC------ceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQNVRSVMDLHDLNTG------KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G------~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..|+ .|.+||+..+ +.++.+......+..+..++++..++ +. +. -.+++.|+.
T Consensus 679 s~D~--~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~la-sg-s~--D~~v~iw~~ 737 (793)
T PLN00181 679 STDN--TLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA-TG-SE--TNEVFVYHK 737 (793)
T ss_pred ECCC--EEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEE-EE-eC--CCEEEEEEC
Confidence 5554 5888888532 33344443333344455566654333 22 22 236777776
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.054 Score=54.31 Aligned_cols=237 Identities=12% Similarity=0.075 Sum_probs=135.7
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-----Ccccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-----GKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-----g~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
--+...+..+++.-+.++.+. ...+.++++.. |.++..-.+ ....+...-++||...+-.+.
T Consensus 16 d~Vt~la~~~~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw-------- 83 (315)
T KOG0279|consen 16 DWVTALAIKIKNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW-------- 83 (315)
T ss_pred ceEEEEEeecCCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc--------
Confidence 336667777887778777654 24677777654 333322111 222367888999975543332
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
+..++.+++.+++.. ..|.... .-..++++|+|.++|+ .++....|-+++.-++ +
T Consensus 84 --------D~~lrlWDl~~g~~t--~~f~GH~--~dVlsva~s~dn~qiv----SGSrDkTiklwnt~g~-c-------- 138 (315)
T KOG0279|consen 84 --------DGTLRLWDLATGEST--RRFVGHT--KDVLSVAFSTDNRQIV----SGSRDKTIKLWNTLGV-C-------- 138 (315)
T ss_pred --------cceEEEEEecCCcEE--EEEEecC--CceEEEEecCCCceee----cCCCcceeeeeeeccc-E--------
Confidence 346889999887544 3343322 1247899999999987 2333467888887662 1
Q ss_pred ceeeecCccceeE---EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec
Q psy2521 363 LKTVIPGMDHHHE---IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 363 ~~~l~~~~~~~~~---~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
...+..+...++- .|+|.....++++... ..-|-.+|+++-+. ....+.+ ...+..+.+..++.+.....+
T Consensus 139 k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~--DktvKvWnl~~~~l--~~~~~gh--~~~v~t~~vSpDGslcasGgk 212 (315)
T KOG0279|consen 139 KYTIHEDSHREWVSCVRFSPNESNPIIVSASW--DKTVKVWNLRNCQL--RTTFIGH--SGYVNTVTVSPDGSLCASGGK 212 (315)
T ss_pred EEEEecCCCcCcEEEEEEcCCCCCcEEEEccC--CceEEEEccCCcch--hhccccc--cccEEEEEECCCCCEEecCCC
Confidence 1122222212221 4899876666665432 22366678876441 1223333 344455555555888888777
Q ss_pred CCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 440 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 440 ~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+| ++++||++.|+.+..+.. .-.|.++..+|.. .++.... -..|-++|+
T Consensus 213 dg--~~~LwdL~~~k~lysl~a-~~~v~sl~fspnr--ywL~~at---~~sIkIwdl 261 (315)
T KOG0279|consen 213 DG--EAMLWDLNEGKNLYSLEA-FDIVNSLCFSPNR--YWLCAAT---ATSIKIWDL 261 (315)
T ss_pred Cc--eEEEEEccCCceeEeccC-CCeEeeEEecCCc--eeEeecc---CCceEEEec
Confidence 65 788999987876555543 2345555555543 2222211 123777887
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.002 Score=72.58 Aligned_cols=192 Identities=12% Similarity=0.098 Sum_probs=115.7
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.+..|+||.+.|+-.+. +..+.+|.+.+.. -.++|.....|.|. +.++|-|=|.+-. .
T Consensus 455 yg~sFsPd~rfLlScSE----------------D~svRLWsl~t~s--~~V~y~GH~~PVwd--V~F~P~GyYFata--s 512 (707)
T KOG0263|consen 455 YGCSFSPDRRFLLSCSE----------------DSSVRLWSLDTWS--CLVIYKGHLAPVWD--VQFAPRGYYFATA--S 512 (707)
T ss_pred eeeeecccccceeeccC----------------Ccceeeeecccce--eEEEecCCCcceee--EEecCCceEEEec--C
Confidence 46789999887765552 2357778887753 45677776667654 5678998766533 2
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~ 415 (783)
+..+..+|-.|-.. +.+++.+...+.. .|.|+..++. +. .....+-.+|+.++. ...++.
T Consensus 513 ~D~tArLWs~d~~~-----------PlRifaghlsDV~cv~FHPNs~Y~a--TG--SsD~tVRlWDv~~G~---~VRiF~ 574 (707)
T KOG0263|consen 513 HDQTARLWSTDHNK-----------PLRIFAGHLSDVDCVSFHPNSNYVA--TG--SSDRTVRLWDVSTGN---SVRIFT 574 (707)
T ss_pred CCceeeeeecccCC-----------chhhhcccccccceEEECCcccccc--cC--CCCceEEEEEcCCCc---EEEEec
Confidence 22336777766533 2234444444433 4778765443 22 223447778887765 345554
Q ss_pred CCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEe
Q psy2521 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 495 (783)
Q Consensus 416 ~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d 495 (783)
.. ...+..+.+...++.+++...+ ..|.+||+.+|+.+.++....+++.+++.+.++..++.. +.. .+|-.||
T Consensus 575 GH-~~~V~al~~Sp~Gr~LaSg~ed--~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasg--g~D--nsV~lWD 647 (707)
T KOG0263|consen 575 GH-KGPVTALAFSPCGRYLASGDED--GLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASG--GAD--NSVRLWD 647 (707)
T ss_pred CC-CCceEEEEEcCCCceEeecccC--CcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEec--CCC--CeEEEEE
Confidence 43 3444444433335555555555 478999998888766665556777788888888666532 222 2566667
Q ss_pred C
Q psy2521 496 I 496 (783)
Q Consensus 496 ~ 496 (783)
+
T Consensus 648 ~ 648 (707)
T KOG0263|consen 648 L 648 (707)
T ss_pred c
Confidence 7
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.021 Score=57.44 Aligned_cols=201 Identities=9% Similarity=0.095 Sum_probs=116.6
Q ss_pred ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEE
Q psy2521 256 KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 335 (783)
Q Consensus 256 ~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~ 335 (783)
+...+.|++|++.|+-.+.+ .+|.+|+.-|..... ... -...|.+..++||.|++++--.
T Consensus 57 Ki~~~~ws~Dsr~ivSaSqD----------------GklIvWDs~TtnK~h--aip--l~s~WVMtCA~sPSg~~VAcGG 116 (343)
T KOG0286|consen 57 KIYAMDWSTDSRRIVSASQD----------------GKLIVWDSFTTNKVH--AIP--LPSSWVMTCAYSPSGNFVACGG 116 (343)
T ss_pred ceeeeEecCCcCeEEeeccC----------------CeEEEEEccccccee--EEe--cCceeEEEEEECCCCCeEEecC
Confidence 34688999999999866633 367788877665432 222 2246889999999999998532
Q ss_pred ecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe
Q psy2521 336 SNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413 (783)
Q Consensus 336 ~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l 413 (783)
-.|..-++++.+.... ...+..+.+.+...-.. .|..|+. |+ |. ........+|++++. ..+..
T Consensus 117 ----LdN~Csiy~ls~~d~~---g~~~v~r~l~gHtgylScC~f~dD~~-il--T~--SGD~TCalWDie~g~--~~~~f 182 (343)
T KOG0286|consen 117 ----LDNKCSIYPLSTRDAE---GNVRVSRELAGHTGYLSCCRFLDDNH-IL--TG--SGDMTCALWDIETGQ--QTQVF 182 (343)
T ss_pred ----cCceeEEEeccccccc---ccceeeeeecCccceeEEEEEcCCCc-eE--ec--CCCceEEEEEcccce--EEEEe
Confidence 2255556666541111 11223333444333222 3444543 33 22 223468888998775 12333
Q ss_pred ecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEE
Q psy2521 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 493 (783)
Q Consensus 414 i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~ 493 (783)
.-+. .+++.-...+.+...+++..-|. ..++||+.+|.-++.+......|..+..-|++..+. ..| .-.+.-.
T Consensus 183 ~GH~-gDV~slsl~p~~~ntFvSg~cD~--~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afa--tGS--DD~tcRl 255 (343)
T KOG0286|consen 183 HGHT-GDVMSLSLSPSDGNTFVSGGCDK--SAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFA--TGS--DDATCRL 255 (343)
T ss_pred cCCc-ccEEEEecCCCCCCeEEeccccc--ceeeeeccCcceeEeecccccccceEEEccCCCeee--ecC--CCceeEE
Confidence 3333 55554323332356677766664 456789888887788877666677777777774433 223 2345666
Q ss_pred EeCC
Q psy2521 494 CNIP 497 (783)
Q Consensus 494 ~d~~ 497 (783)
||+.
T Consensus 256 yDlR 259 (343)
T KOG0286|consen 256 YDLR 259 (343)
T ss_pred Eeec
Confidence 7773
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0013 Score=76.51 Aligned_cols=237 Identities=15% Similarity=0.141 Sum_probs=120.8
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-----------Cccc--------cccccccccCeeEEeeCCCE
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-----------GKDY--------PEVLKNVKFPSISWTHDHKG 268 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-----------g~~~--------~~~~~~~~~~~~~WspDg~~ 268 (783)
..++.-+.|||||++||.+. |.+-|.||+-+. |+.. .+.-+..+...+.|+||++.
T Consensus 69 ~~sv~CVR~S~dG~~lAsGS-----DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~ 143 (942)
T KOG0973|consen 69 DGSVNCVRFSPDGSYLASGS-----DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL 143 (942)
T ss_pred cCceeEEEECCCCCeEeecc-----CcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence 45677899999999999754 446667776552 1110 01112234467999999987
Q ss_pred EEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE
Q psy2521 269 FFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 269 l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d 348 (783)
|+-...+ +.|.+++.-+- +...++... ....-++.|.|-|||++-.+.+ ..|.+++
T Consensus 144 lvS~s~D----------------nsViiwn~~tF--~~~~vl~~H--~s~VKGvs~DP~Gky~ASqsdD----rtikvwr 199 (942)
T KOG0973|consen 144 LVSVSLD----------------NSVIIWNAKTF--ELLKVLRGH--QSLVKGVSWDPIGKYFASQSDD----RTLKVWR 199 (942)
T ss_pred EEEeccc----------------ceEEEEccccc--eeeeeeecc--cccccceEECCccCeeeeecCC----ceEEEEE
Confidence 7766643 24556655443 222333322 2234488999999999855332 3555555
Q ss_pred CCCCCCCcccCCCCceeeecCccc------eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE---EeecCCC
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDH------HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK---TLIPEDE 418 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~------~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~---~li~~~~ 418 (783)
+.+- + + ...+...++. -.. .|||||++|.....-+++..-+-.++-+ .|+ .++.+..
T Consensus 200 t~dw--~-i-----~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~-----tWk~~~~LvGH~~ 266 (942)
T KOG0973|consen 200 TSDW--G-I-----EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG-----TWKVDKDLVGHSA 266 (942)
T ss_pred cccc--e-e-----eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecC-----CceeeeeeecCCC
Confidence 4330 0 0 0111111111 111 4999999887644333333333333321 133 3555442
Q ss_pred CceEEEE--EEee----------CC--E-EEEEEecCCeeEEEEEECCCCceeeeec----CCCeEEEeeeccccccEEE
Q psy2521 419 NRTLDVV--AAVA----------NN--K-LIVHYIQNVRSVMDLHDLNTGKRLHSFP----LDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 419 ~~~l~~~--~~~~----------g~--~-l~~~~~~~g~~~l~~~dl~~G~~~~~l~----~~~g~v~~~s~~~d~~~l~ 479 (783)
....-.+ .++. .+ + ++....+|+ .|.+|.. +.. |.+- +-.-+|..++|++||-.++
T Consensus 267 p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDr--SlSVW~T--~~~-RPl~vi~~lf~~SI~DmsWspdG~~Lf 341 (942)
T KOG0973|consen 267 PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDR--SLSVWNT--ALP-RPLFVIHNLFNKSIVDMSWSPDGFSLF 341 (942)
T ss_pred ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCc--cEEEEec--CCC-CchhhhhhhhcCceeeeeEcCCCCeEE
Confidence 2111111 0010 01 1 444444553 4777764 332 3221 1134567888888886555
Q ss_pred E-EEecCCCCceEEEEeC
Q psy2521 480 Y-GFTSFLQPGTIYHCNI 496 (783)
Q Consensus 480 ~-~~ss~~~P~~vy~~d~ 496 (783)
. ++. ++|+.+.+
T Consensus 342 acS~D-----GtV~~i~F 354 (942)
T KOG0973|consen 342 ACSLD-----GTVALIHF 354 (942)
T ss_pred EEecC-----CeEEEEEc
Confidence 3 332 35666655
|
|
| >KOG2382|consensus | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00034 Score=72.43 Aligned_cols=103 Identities=17% Similarity=0.122 Sum_probs=62.3
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHH-HcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l-~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
-++.|.++.+||-+|+...+ .. +..-| ...|--+...|.|-.|... +..++ .....-+|+..-++.....
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw--~s-v~k~Ls~~l~~~v~~vd~RnHG~Sp---~~~~h--~~~~ma~dv~~Fi~~v~~~- 119 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENW--RS-VAKNLSRKLGRDVYAVDVRNHGSSP---KITVH--NYEAMAEDVKLFIDGVGGS- 119 (315)
T ss_pred cCCCCceEEecccccCCCCH--HH-HHHHhcccccCceEEEecccCCCCc---ccccc--CHHHHHHHHHHHHHHcccc-
Confidence 35789999999988877443 22 22233 3446679999999966544 22222 2333344555545444322
Q ss_pred CCCCCcEEEEEeChhH-HHHHHHHhcCCCceeEEE
Q psy2521 631 YTKPKYITIMGGSNGG-LLVGACLNQRPELYGAAL 664 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG-~l~~~~~~~~p~lf~a~i 664 (783)
+.-.++.|.|||||| -++++....+|++..-+|
T Consensus 120 -~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rli 153 (315)
T KOG2382|consen 120 -TRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLI 153 (315)
T ss_pred -cccCCceecccCcchHHHHHHHHHhcCcccceeE
Confidence 234589999999999 444454555687644443
|
|
| >TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family | Back alignment and domain information |
|---|
Probab=97.74 E-value=9.6e-05 Score=86.31 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=64.7
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh--c----------c---------ccC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA--G----------R---------LLK 611 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~--g----------~---------~~~ 611 (783)
...|+||++||-.+.... |.. +...|.++||.|+++|+||+|... |... + + +.+
T Consensus 447 ~g~P~VVllHG~~g~~~~--~~~-lA~~La~~Gy~VIaiDlpGHG~S~--~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKEN--ALA-FAGTLAAAGVATIAIDHPLHGARS--FDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCCcEEEEeCCCCCCHHH--HHH-HHHHHHhCCcEEEEeCCCCCCccc--cccccccccccccCccceeccccccccccC
Confidence 346899999997776543 332 345566579999999999976542 2200 0 0 112
Q ss_pred CcChHHHHHHHHHHHH------Hc----CCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 612 KQNCFDDFQAAAEYMI------NK----KYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~------~~----~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
-.....|+......|. .. +..+..++.++|||+||++...++..
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2334577777666665 11 12456799999999999999888764
|
Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae |
| >PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00025 Score=75.75 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCC--CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh-hhcc-----c---------c
Q psy2521 616 FDDFQAAAEYMINKKYT--KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM-LRFN-----K---------F 678 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~--d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~-~~~~-----~---------~ 678 (783)
--|.+.|+.+|++.-.. +.-++.++|+|+||||+..++.-.|.+|.++|--++..-. +++. . +
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~ 242 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEF 242 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccc
Confidence 46888899999876322 2348999999999999999999999999999876653321 1111 0 0
Q ss_pred ----------cccccchhhhCCCC--CHHHHHHHHhcCcccCCCCCCCCCcC---CcEEEEecCCCCCCCcHHHHHHHHH
Q psy2521 679 ----------TIAYYSESEFGSPN--NKTHFHNLLSYSPLHNIKVPPNNTQY---PATLVLTGDHDDRVPPLHSYKFIAT 743 (783)
Q Consensus 679 ----------~~~~~~~~~~g~p~--~~~~~~~~~~~sp~~~v~~~~~~~~~---P~~Li~~g~~D~~V~~~~~~~~~~~ 743 (783)
.....|....+.|. ..+. ..++..--..++... ..+ |-....|+..|+.+|+.+-.+++..
T Consensus 243 ~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~-~~IR~iLn~~HL~iq---s~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~ 318 (403)
T PF11144_consen 243 FNFKNIRIYCFDKTFWTRNKNSPYYFSKAR-YIIRSILNPDHLKIQ---SNYNKKIIYVSYHSIKDDLAPAEDKEELYEI 318 (403)
T ss_pred cccCCEEEEEEeccccccCCCCccccChHH-HHHHHhcChHHHHHH---HhcccceEEEEEeccCCCCCCHHHHHHHHHH
Confidence 00112333223331 1111 112222111121111 112 3478899999999999999999999
Q ss_pred HHhhhCCCCCCCCcEEEEEe-----------CCCCccCCccchhhhhc
Q psy2521 744 LQEKIGSLPYQKNPLLLRVE-----------QDAGHGQGKALDIELKN 780 (783)
Q Consensus 744 L~~~~~~~~~~~~~~~l~~~-----------~~~gHg~~~~~~~~~~~ 780 (783)
|++. |-++++... .+-.||++-+....++.
T Consensus 319 l~~l-------gfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~K 359 (403)
T PF11144_consen 319 LKNL-------GFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKK 359 (403)
T ss_pred HHHc-------CCCeEEEEecChhhccchheeccccCCCCCHHHHHHH
Confidence 9999 877777766 45579988776665543
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0022 Score=67.99 Aligned_cols=232 Identities=14% Similarity=0.152 Sum_probs=123.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc----cccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
+.|.-..|+|+|+..+++.. ....+|.||+++++..+... +.-....+.-|||++.|++...
T Consensus 258 fPi~~a~f~p~G~~~i~~s~----rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~---------- 323 (514)
T KOG2055|consen 258 FPIQKAEFAPNGHSVIFTSG----RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGN---------- 323 (514)
T ss_pred CccceeeecCCCceEEEecc----cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEccc----------
Confidence 45777899999996666543 24679999999998765432 2112346788999997776552
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.. |+|-|-....+ ++..-.- ++...++.||.||+.|+.... ..+||++|+... . -..
T Consensus 324 ------~G--~I~lLhakT~e--li~s~Ki-eG~v~~~~fsSdsk~l~~~~~----~GeV~v~nl~~~--~------~~~ 380 (514)
T KOG2055|consen 324 ------NG--HIHLLHAKTKE--LITSFKI-EGVVSDFTFSSDSKELLASGG----TGEVYVWNLRQN--S------CLH 380 (514)
T ss_pred ------Cc--eEEeehhhhhh--hhheeee-ccEEeeEEEecCCcEEEEEcC----CceEEEEecCCc--c------eEE
Confidence 11 33333333223 2322211 224467899999999886533 259999999872 0 112
Q ss_pred eeec-CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcC--CCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 365 TVIP-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINL--NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 365 ~l~~-~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~--~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..+. +.-.+.. ..|.+|++|..-++.+- -.||-.+- .+..+...+.+- .-...+..+.+..+..|+....+.
T Consensus 381 rf~D~G~v~gts~~~S~ng~ylA~GS~~Gi--VNIYd~~s~~~s~~PkPik~~d--NLtt~Itsl~Fn~d~qiLAiaS~~ 456 (514)
T KOG2055|consen 381 RFVDDGSVHGTSLCISLNGSYLATGSDSGI--VNIYDGNSCFASTNPKPIKTVD--NLTTAITSLQFNHDAQILAIASRV 456 (514)
T ss_pred EEeecCccceeeeeecCCCceEEeccCcce--EEEeccchhhccCCCCchhhhh--hhheeeeeeeeCcchhhhhhhhhc
Confidence 2222 2222333 46788886665444321 22443221 111111111110 001223444444435555555544
Q ss_pred CeeEEEEEECCCCceeeeecC---CCeEEEeeeccccccEEEEE
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPL---DLGQITHISGRRKYNEVFYG 481 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~---~~g~v~~~s~~~d~~~l~~~ 481 (783)
....|.+.-+.+-....-++. +.|.+..+..+|.+..+.+.
T Consensus 457 ~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvG 500 (514)
T KOG2055|consen 457 KKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVG 500 (514)
T ss_pred cccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEee
Confidence 455566665544333233332 25667777777777666543
|
|
| >PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0024 Score=69.64 Aligned_cols=102 Identities=18% Similarity=0.230 Sum_probs=64.7
Q ss_pred CCccEEEE----ecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHH-HH-
Q psy2521 553 RRNPVIIY----GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE-YM- 626 (783)
Q Consensus 553 ~~~P~ll~----~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~-~l- 626 (783)
.+.|.||. +|| +|+..-.. .+++...|. .|..|..+-+.--.+-| .++.|+..+.. +|
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~-~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv~ 130 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALR-AGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFVE 130 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHH-cCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHHH
Confidence 45677776 565 23332222 334556666 49888777776544333 24667776533 33
Q ss_pred --HHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEE-EEcCCcch
Q psy2521 627 --INKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA-LILVGALD 671 (783)
Q Consensus 627 --~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~-i~~~~~~d 671 (783)
.+.+--. .|..|+|-+.||++++.++..+|+++.-+ ++.+|+.-
T Consensus 131 ~V~~~hp~~-~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 131 EVAERHPDA-PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HHHHhCCCC-CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 2333222 39999999999999999999999998765 45566543
|
Their function is unknown. |
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0017 Score=68.03 Aligned_cols=231 Identities=13% Similarity=0.113 Sum_probs=126.7
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCC--CEEEEEEeecCCCCCCCC
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDH--KGFFYNQYCDINGTADGT 284 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg--~~l~y~~~~~~~~~~~g~ 284 (783)
+-.+....+|+|++.||-..- + ..+.||...++..+..-.+ ....+.+.|+|.. ..++-.+.|
T Consensus 175 ~rPis~~~fS~ds~~laT~sw-s----G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~D--------- 240 (459)
T KOG0272|consen 175 TRPISGCSFSRDSKHLATGSW-S----GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASAD--------- 240 (459)
T ss_pred CCcceeeEeecCCCeEEEeec-C----CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccC---------
Confidence 445788999999999986542 2 4578888888754432222 2245789999984 344433322
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
..+.++++.+. + .+-+...+..-...+.|.|+|++|+-.+.+ ....++|+.++. ..
T Consensus 241 -------gtvklw~~~~e--~--~l~~l~gH~~RVs~VafHPsG~~L~TasfD----~tWRlWD~~tk~-El-------- 296 (459)
T KOG0272|consen 241 -------GTVKLWKLSQE--T--PLQDLEGHLARVSRVAFHPSGKFLGTASFD----STWRLWDLETKS-EL-------- 296 (459)
T ss_pred -------CceeeeccCCC--c--chhhhhcchhhheeeeecCCCceeeecccc----cchhhcccccch-hh--------
Confidence 23555555442 1 222222222234578999999999854333 455678888841 10
Q ss_pred eeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 365 TVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 365 ~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
-+..+...+.. .|.+||. |+.....++ -.+| +|+.++. .. -++...-..++.-.+.++ ++.+.+...|+
T Consensus 297 L~QEGHs~~v~~iaf~~DGS-L~~tGGlD~-~~Rv--WDlRtgr--~i-m~L~gH~k~I~~V~fsPN-Gy~lATgs~Dn- 367 (459)
T KOG0272|consen 297 LLQEGHSKGVFSIAFQPDGS-LAATGGLDS-LGRV--WDLRTGR--CI-MFLAGHIKEILSVAFSPN-GYHLATGSSDN- 367 (459)
T ss_pred HhhcccccccceeEecCCCc-eeeccCccc-hhhe--eecccCc--EE-EEecccccceeeEeECCC-ceEEeecCCCC-
Confidence 11233333332 5888986 333332222 2233 5776665 12 222222245554445555 77777777664
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQ 487 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~ 487 (783)
...+||+.--+.+..|+...--|+.+-.+|....+.++. |+..
T Consensus 368 -t~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Ta-syD~ 410 (459)
T KOG0272|consen 368 -TCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTA-SYDN 410 (459)
T ss_pred -cEEEeeecccccceecccccchhhheEecccCCeEEEEc-ccCc
Confidence 567788843334444544434455665666555555444 4443
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.11 Score=53.06 Aligned_cols=244 Identities=14% Similarity=0.103 Sum_probs=135.7
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..+.+|+||..|+-+.+ .-.|+++|..+|+.+... ...-...-+.|.-....+.+++..
T Consensus 15 ~~i~sl~fs~~G~~litss~-----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk------------ 77 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSE-----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTK------------ 77 (311)
T ss_pred CceeEEEecCCCCEEEEecC-----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCC------------
Confidence 34788999999999987543 246999999999876432 121111356777777778777731
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....|.+..|-+. +-+..|.+ +.....++..||-+...+ +++ ....|+++|+....+. -+.
T Consensus 78 --~d~tIryLsl~dN--kylRYF~G--H~~~V~sL~~sP~~d~Fl-S~S---~D~tvrLWDlR~~~cq---------g~l 138 (311)
T KOG1446|consen 78 --EDDTIRYLSLHDN--KYLRYFPG--HKKRVNSLSVSPKDDTFL-SSS---LDKTVRLWDLRVKKCQ---------GLL 138 (311)
T ss_pred --CCCceEEEEeecC--ceEEEcCC--CCceEEEEEecCCCCeEE-ecc---cCCeEEeeEecCCCCc---------eEE
Confidence 2245777777554 23334433 233456888999875443 322 2368899999762111 112
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC-CCCceEEEE-EEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLDVV-AAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~-~~~~~l~~~-~~~~g~~l~~~~~~~g~~~l 445 (783)
.-.......++|.|-.++...+. . .|-.+|+..-+....+..... .+......+ .+.+|+.|++.... +.+
T Consensus 139 ~~~~~pi~AfDp~GLifA~~~~~--~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~---s~~ 211 (311)
T KOG1446|consen 139 NLSGRPIAAFDPEGLIFALANGS--E--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA---SFI 211 (311)
T ss_pred ecCCCcceeECCCCcEEEEecCC--C--eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC---CcE
Confidence 11122334688887544433222 1 466667654222223433322 222222333 34454556655543 367
Q ss_pred EEEECCCCceeeeecCC--CeEE-EeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy2521 446 DLHDLNTGKRLHSFPLD--LGQI-THISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 504 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~--~g~v-~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg 504 (783)
+++|.-+|..+..+... .+.+ .+...+||+.-++. -++ -++++.|++ ++|
T Consensus 212 ~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~-gs~---dg~i~vw~~-----~tg 264 (311)
T KOG1446|consen 212 YLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLS-GSD---DGTIHVWNL-----ETG 264 (311)
T ss_pred EEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEE-ecC---CCcEEEEEc-----CCC
Confidence 88887789877666654 2211 13345677755543 222 357999999 576
|
|
| >PRK04940 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0011 Score=63.33 Aligned_cols=108 Identities=13% Similarity=-0.003 Sum_probs=67.4
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPN 714 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~ 714 (783)
++++|+|.|+||+.+.+++.++. ..+|...|.+..-....--.+. ..+|. --.++..+.++ ++.|+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g---~~aVLiNPAv~P~~~L~~~ig~--~~~y~-~~~~~h~~eL~-------~~~p~- 125 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG---IRQVIFNPNLFPEENMEGKIDR--PEEYA-DIATKCVTNFR-------EKNRD- 125 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC---CCEEEECCCCChHHHHHHHhCC--Ccchh-hhhHHHHHHhh-------hcCcc-
Confidence 46999999999999999999874 2556678877664422101110 01111 11223333333 23331
Q ss_pred CCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 715 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 715 ~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
..+++..+.|...++.++.+.++. . ..+.+.+|+.|+|..-+
T Consensus 126 -----r~~vllq~gDEvLDyr~a~~~y~~---~----------y~~~v~~GGdH~f~~fe 167 (180)
T PRK04940 126 -----RCLVILSRNDEVLDSQRTAEELHP---Y----------YEIVWDEEQTHKFKNIS 167 (180)
T ss_pred -----cEEEEEeCCCcccCHHHHHHHhcc---C----------ceEEEECCCCCCCCCHH
Confidence 278889999999999887655431 1 24778899999997543
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.011 Score=66.54 Aligned_cols=220 Identities=13% Similarity=0.112 Sum_probs=120.4
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
..|=|-+++|..+.. ...|-|+|+++...+.... ......+++-+||+++++-.+.|.
T Consensus 418 ~~Fvpgd~~Iv~G~k-----~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDk---------------- 476 (888)
T KOG0306|consen 418 SKFVPGDRYIVLGTK-----NGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADK---------------- 476 (888)
T ss_pred EEecCCCceEEEecc-----CCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCc----------------
Confidence 345555555554432 3468889988886654222 122235677789999988766332
Q ss_pred eEEEEE------cCCCCCC-----ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 293 KIYYHV------LGTEQDK-----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 293 ~v~~~~------lgt~~~~-----d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
.|.+|+ .+..+.+ ...+.+-++ -...+.+|||||+|++..-+ .+-.||.+|.-.-
T Consensus 477 tVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d---dvL~v~~Spdgk~LaVsLLd--nTVkVyflDtlKF--------- 542 (888)
T KOG0306|consen 477 TVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED---DVLCVSVSPDGKLLAVSLLD--NTVKVYFLDTLKF--------- 542 (888)
T ss_pred EEEEEeEEEEeccCcccceeeeeccceEEeccc---cEEEEEEcCCCcEEEEEecc--CeEEEEEecceee---------
Confidence 122221 1111111 011223333 23678999999999987654 2356676664220
Q ss_pred CceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 362 PLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 362 ~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
...|....-.... .+|||++.++ .... ..|-++|-.|...- -+-++.++ +.+..-.+.++ .+++|+..++
T Consensus 543 -flsLYGHkLPV~smDIS~DSkliv-TgSA-DKnVKiWGLdFGDC----HKS~fAHd-DSvm~V~F~P~-~~~FFt~gKD 613 (888)
T KOG0306|consen 543 -FLSLYGHKLPVLSMDISPDSKLIV-TGSA-DKNVKIWGLDFGDC----HKSFFAHD-DSVMSVQFLPK-THLFFTCGKD 613 (888)
T ss_pred -eeeecccccceeEEeccCCcCeEE-eccC-CCceEEeccccchh----hhhhhccc-CceeEEEEccc-ceeEEEecCc
Confidence 1111111111222 3889977544 4333 24567777776432 24566666 56665556665 8999999888
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
+ .+..||-..=+.++.+......|..+...|+|+.++
T Consensus 614 ~--kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vv 650 (888)
T KOG0306|consen 614 G--KVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVV 650 (888)
T ss_pred c--eEEeechhhhhhheeeccchheeeeeEEcCCCCeEE
Confidence 5 678886422223344444444555666677775444
|
|
| >PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00034 Score=78.72 Aligned_cols=112 Identities=20% Similarity=0.247 Sum_probs=70.1
Q ss_pred ccEEEEecCCCCCccCCcC--cHHHHHHHHcCCEEEEEecCCCCCCCChhHHh--h----ccccCCcChHHHHHHHHHHH
Q psy2521 555 NPVIIYGYGGYGVSVLPTF--SISRCMFLRHFNGIYAIPNIRGGGELGEDWHN--A----GRLLKKQNCFDDFQAAAEYM 626 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~--~----g~~~~~~~~~~D~~a~~~~l 626 (783)
.|++||+-| -+.. ...+ ...+..+..+.|..+++..+|- ||++.-- . -+...-...+.|+..-++++
T Consensus 29 gpifl~~gg-E~~~-~~~~~~~~~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~ 103 (434)
T PF05577_consen 29 GPIFLYIGG-EGPI-EPFWINNGFMWELAKEFGALVVALEHRY---YGKSQPFGDLSTENLRYLTSEQALADLAYFIRYV 103 (434)
T ss_dssp SEEEEEE---SS-H-HHHHHH-HHHHHHHHHHTEEEEEE--TT---STTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCcc-chhhhcCChHHHHHHHcCCcEEEeehhh---hcCCCCccccchhhHHhcCHHHHHHHHHHHHHHH
Confidence 799998844 2222 1111 1123455557799999999998 7765421 1 11223345689999999998
Q ss_pred HHcC-CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 627 INKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 627 ~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
..+- ..+..++.++|+||||.|++++-..+|++|.++++.++.+.
T Consensus 104 ~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 104 KKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred HHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 8653 33446999999999999999999999999999988877543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C. |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.021 Score=60.44 Aligned_cols=236 Identities=16% Similarity=0.084 Sum_probs=124.4
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
++.|.|+.+.|.|+ +..| ..|+.+|.++|+......... +++...- |..+.+++...
T Consensus 29 gP~w~~~~~~L~w~-DI~~---~~i~r~~~~~g~~~~~~~p~~-~~~~~~~-d~~g~Lv~~~~----------------- 85 (307)
T COG3386 29 GPVWDPDRGALLWV-DILG---GRIHRLDPETGKKRVFPSPGG-FSSGALI-DAGGRLIACEH----------------- 85 (307)
T ss_pred CccCcCCCCEEEEE-eCCC---CeEEEecCCcCceEEEECCCC-cccceee-cCCCeEEEEcc-----------------
Confidence 47899999988664 5444 368999998886544333322 2344443 43444444411
Q ss_pred eEEEEEcCCCCCCceeEEecCCC-C-eeEEEEEEecCCcEEEEEEe-----cCCC--CcEEEEEECCCCCCCcccCCCCc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNG-R-SLGLHSEVTDCGRYLLVSTS-----NNTQ--GSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~-~-~~~~~~~~SpDGk~l~~~~~-----~~~~--~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
.+++.+..+... .+++.+..++ + .........|||++-+=... .... ...||.+|..++ .
T Consensus 86 g~~~~~~~~~~~-~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~----------~ 154 (307)
T COG3386 86 GVRLLDPDTGGK-ITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGG----------V 154 (307)
T ss_pred ccEEEeccCCce-eEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCC----------E
Confidence 233333322111 0122221111 1 11235677889887654433 1111 156999986542 2
Q ss_pred eeeecC-cccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCC--CCCCC--cEEeecCCCCceEEEEEEeeCCEEEEEE
Q psy2521 364 KTVIPG-MDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKN--WKTLIPEDENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 364 ~~l~~~-~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~--~~~~~--~~~li~~~~~~~l~~~~~~~g~~l~~~~ 437 (783)
.+++.+ ..... -.|||||+.||+.-. ...+|++++++. +.... ....... +.....++....++.++...
T Consensus 155 ~~l~~~~~~~~NGla~SpDg~tly~aDT---~~~~i~r~~~d~~~g~~~~~~~~~~~~~-~~G~PDG~~vDadG~lw~~a 230 (307)
T COG3386 155 VRLLDDDLTIPNGLAFSPDGKTLYVADT---PANRIHRYDLDPATGPIGGRRGFVDFDE-EPGLPDGMAVDADGNLWVAA 230 (307)
T ss_pred EEeecCcEEecCceEECCCCCEEEEEeC---CCCeEEEEecCcccCccCCcceEEEccC-CCCCCCceEEeCCCCEEEec
Confidence 223332 21111 159999999998533 346799998762 11111 1122222 12333455555545555543
Q ss_pred ecCCeeEEEEEECCCCceeeeecCCCeEEEee-eccccccEEEEEEecCCCC
Q psy2521 438 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI-SGRRKYNEVFYGFTSFLQP 488 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~-s~~~d~~~l~~~~ss~~~P 488 (783)
..+ -..|.++++ +|+.+..+.+|...++.. -+.++.+.||++.+....+
T Consensus 231 ~~~-g~~v~~~~p-dG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~~~~ 280 (307)
T COG3386 231 VWG-GGRVVRFNP-DGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSARSGMS 280 (307)
T ss_pred ccC-CceEEEECC-CCcEEEEEECCCCCCccceEeCCCcCEEEEEecCCCCC
Confidence 333 368999999 599988888883222221 1235668888887766554
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0011 Score=74.62 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=91.6
Q ss_pred CCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-c
Q psy2521 177 GLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-V 255 (783)
Q Consensus 177 ~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~ 255 (783)
+.+....||-.+. ....+++..... .++-+.|.|+..|+|- |+...++++||+.+|..++.-.+. .
T Consensus 512 s~D~tArLWs~d~-~~PlRifaghls-------DV~cv~FHPNs~Y~aT-----GSsD~tVRlWDv~~G~~VRiF~GH~~ 578 (707)
T KOG0263|consen 512 SHDQTARLWSTDH-NKPLRIFAGHLS-------DVDCVSFHPNSNYVAT-----GSSDRTVRLWDVSTGNSVRIFTGHKG 578 (707)
T ss_pred CCCceeeeeeccc-CCchhhhccccc-------ccceEEECCccccccc-----CCCCceEEEEEcCCCcEEEEecCCCC
Confidence 4456678887654 344566554332 2556899999999884 444578999999999876643332 2
Q ss_pred ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEE
Q psy2521 256 KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 335 (783)
Q Consensus 256 ~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~ 335 (783)
....+++||+|++|+-... ...|.+|+++++.. +.....+.....++.+|.||..|+..
T Consensus 579 ~V~al~~Sp~Gr~LaSg~e----------------d~~I~iWDl~~~~~----v~~l~~Ht~ti~SlsFS~dg~vLasg- 637 (707)
T KOG0263|consen 579 PVTALAFSPCGRYLASGDE----------------DGLIKIWDLANGSL----VKQLKGHTGTIYSLSFSRDGNVLASG- 637 (707)
T ss_pred ceEEEEEcCCCceEeeccc----------------CCcEEEEEcCCCcc----hhhhhcccCceeEEEEecCCCEEEec-
Confidence 3468899999998874441 23688889987531 21111122345688999999988743
Q ss_pred ecCCCCcEEEEEECCC
Q psy2521 336 SNNTQGSDLHYFDLHS 351 (783)
Q Consensus 336 ~~~~~~~~l~~~dl~~ 351 (783)
...+.|.++|+..
T Consensus 638 ---g~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 638 ---GADNSVRLWDLTK 650 (707)
T ss_pred ---CCCCeEEEEEchh
Confidence 2347888889876
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.014 Score=61.18 Aligned_cols=261 Identities=16% Similarity=0.167 Sum_probs=124.8
Q ss_pred EEeCCeEE-----EEEEcCCCCeeEEEEEeC--CCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEE
Q psy2521 164 QRQENNYF-----YFHNKGLQNHSILYVQRN--LTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNT 236 (783)
Q Consensus 164 ~~~G~~~y-----y~~~~~~~~~~~l~~~~~--~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~ 236 (783)
+++|+.+| |.|-..+....+|-..+. +....|+.|-+.....- .......++|.|||++.+.-- +-...
T Consensus 44 spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~-~~~~~~~~ls~dgk~~~V~N~---TPa~S 119 (342)
T PF06433_consen 44 SPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQV-VPYKNMFALSADGKFLYVQNF---TPATS 119 (342)
T ss_dssp -TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--B-S--GGGEEE-TTSSEEEEEEE---SSSEE
T ss_pred CCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhee-cccccceEEccCCcEEEEEcc---CCCCe
Confidence 35566544 333333333333333332 23345565654311111 112345899999998765432 23367
Q ss_pred EEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc---eeEEec
Q psy2521 237 LHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD---IPVVEF 312 (783)
Q Consensus 237 i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d---~~v~~~ 312 (783)
+-|+|++.++.+.+. +.+|. .-+-|.+ ++|+-.. .+ ..+....|+....+. ..+|..
T Consensus 120 VtVVDl~~~kvv~ei~~PGC~-~iyP~~~--~~F~~lC-~D---------------Gsl~~v~Ld~~Gk~~~~~t~~F~~ 180 (342)
T PF06433_consen 120 VTVVDLAAKKVVGEIDTPGCW-LIYPSGN--RGFSMLC-GD---------------GSLLTVTLDADGKEAQKSTKVFDP 180 (342)
T ss_dssp EEEEETTTTEEEEEEEGTSEE-EEEEEET--TEEEEEE-TT---------------SCEEEEEETSTSSEEEEEEEESST
T ss_pred EEEEECCCCceeeeecCCCEE-EEEecCC--CceEEEe-cC---------------CceEEEEECCCCCEeEeeccccCC
Confidence 999999999987543 45553 1222322 3333222 11 123344444322211 124443
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-Cc-----cceeE--EEEeeCCEE
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GM-----DHHHE--IIANNGPEL 384 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~-----~~~~~--~~s~dg~~l 384 (783)
.+++ .+..+.++.++.+++|.+.. ..||-+|+.+. ...+ ..+|..+.. +. .+++. .+.+..++|
T Consensus 181 ~~dp-~f~~~~~~~~~~~~~F~Sy~----G~v~~~dlsg~-~~~~--~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl 252 (342)
T PF06433_consen 181 DDDP-LFEHPAYSRDGGRLYFVSYE----GNVYSADLSGD-SAKF--GKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL 252 (342)
T ss_dssp TTS--B-S--EEETTTTEEEEEBTT----SEEEEEEETTS-SEEE--EEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred CCcc-cccccceECCCCeEEEEecC----CEEEEEeccCC-cccc--cCcccccCccccccCcCCcceeeeeeccccCeE
Confidence 3433 44566778777777776544 58999999872 1111 112221111 11 12233 355567788
Q ss_pred EEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCE-EEEEEecCCeeEEEEEECCCCceee
Q psy2521 385 IVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNK-LIVHYIQNVRSVMDLHDLNTGKRLH 457 (783)
Q Consensus 385 ~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~-l~~~~~~~g~~~l~~~dl~~G~~~~ 457 (783)
|++-..+ .+...||.+|++++++ .. -++-. ..+.++.+..++. +++.... +...|+++|..+|+.++
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~kr--v~-Ri~l~--~~~~Si~Vsqd~~P~L~~~~~-~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKR--VA-RIPLE--HPIDSIAVSQDDKPLLYALSA-GDGTLDVYDAATGKLVR 326 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEE--EE-EEEEE--EEESEEEEESSSS-EEEEEET-TTTEEEEEETTT--EEE
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeE--EE-EEeCC--CccceEEEccCCCcEEEEEcC-CCCeEEEEeCcCCcEEe
Confidence 8876432 3345799999988652 22 22211 1232444444333 4443332 33579999999999887
Q ss_pred eecC
Q psy2521 458 SFPL 461 (783)
Q Consensus 458 ~l~~ 461 (783)
.+..
T Consensus 327 ~~~~ 330 (342)
T PF06433_consen 327 SIEQ 330 (342)
T ss_dssp EE--
T ss_pred ehhc
Confidence 7753
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.12 Score=53.87 Aligned_cols=225 Identities=11% Similarity=0.009 Sum_probs=110.1
Q ss_pred CeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc
Q psy2521 168 NNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 247 (783)
Q Consensus 168 ~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~ 247 (783)
.-.+|-|+++ .-+++.+..++.....+.+ +.+..-.+.-.|||||++|.-+..+-.+.+..|-|+|++.+-.
T Consensus 18 ~avafaRRPG----~~~~v~D~~~g~~~~~~~a----~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ 89 (305)
T PF07433_consen 18 EAVAFARRPG----TFALVFDCRTGQLLQRLWA----PPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYR 89 (305)
T ss_pred eEEEEEeCCC----cEEEEEEcCCCceeeEEcC----CCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcE
Confidence 3455666555 2233333334444433432 2344446678999999998777666555567899999984432
Q ss_pred -ccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc---cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEE
Q psy2521 248 -YPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET---TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS 322 (783)
Q Consensus 248 -~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~---~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~ 322 (783)
+.+ ...++....+.|.|||+.|+..----....+.|..+ +.-.+. |.+.+..++.--++..............+
T Consensus 90 ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~ps-L~~ld~~sG~ll~q~~Lp~~~~~lSiRHL 168 (305)
T PF07433_consen 90 RIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPS-LVYLDARSGALLEQVELPPDLHQLSIRHL 168 (305)
T ss_pred EEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCc-eEEEecCCCceeeeeecCccccccceeeE
Confidence 222 233444467899999999987641100000111111 111222 33443333321111111111111123467
Q ss_pred EEecCCcEEEEEEecCCCC---cEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEE
Q psy2521 323 EVTDCGRYLLVSTSNNTQG---SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVT 399 (783)
Q Consensus 323 ~~SpDGk~l~~~~~~~~~~---~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~ 399 (783)
++++||.-++-....+... .-|.+.+... +...+.........+.++.++. .++.+|+.+.+.+-++ +.+..
T Consensus 169 a~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~-~~~~~~~p~~~~~~l~~Y~gSI-a~~~~g~~ia~tsPrG---g~~~~ 243 (305)
T PF07433_consen 169 AVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG-ALRLLPAPEEQWRRLNGYIGSI-AADRDGRLIAVTSPRG---GRVAV 243 (305)
T ss_pred EecCCCcEEEEEecCCCCCccCCeEEEEcCCC-cceeccCChHHHHhhCCceEEE-EEeCCCCEEEEECCCC---CEEEE
Confidence 8899998766555544321 3344444332 1100000000001122222222 3777888888876663 35777
Q ss_pred EcCCCCC
Q psy2521 400 INLNNPC 406 (783)
Q Consensus 400 ~d~~~~~ 406 (783)
+|.+++.
T Consensus 244 ~d~~tg~ 250 (305)
T PF07433_consen 244 WDAATGR 250 (305)
T ss_pred EECCCCC
Confidence 7887765
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.018 Score=59.37 Aligned_cols=171 Identities=18% Similarity=0.165 Sum_probs=94.0
Q ss_pred eCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCC--ce--EEEEEEECCCCccccccccccccCeeEEe
Q psy2521 188 RNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS--DW--NTLHIKDVDTGKDYPEVLKNVKFPSISWT 263 (783)
Q Consensus 188 ~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~--d~--~~i~v~Dl~tg~~~~~~~~~~~~~~~~Ws 263 (783)
+..+++.+.+++... .........+..++|||+ |.++...... .. ..|+.++.+ ++.......-....+++|+
T Consensus 66 d~~~g~~~~~~~~~~-~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s 142 (246)
T PF08450_consen 66 DPDTGKVTVLADLPD-GGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFS 142 (246)
T ss_dssp ETTTTEEEEEEEEET-TCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEE
T ss_pred ecCCCcEEEEeeccC-CCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEEC
Confidence 444556666666421 111346788899999999 5454433211 11 679999988 5543221111122589999
Q ss_pred eCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC---CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC
Q psy2521 264 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD---KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ 340 (783)
Q Consensus 264 pDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~---~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~ 340 (783)
||++.||++.. ...+|++.++..... ....+...+.....--++.+..+|+. .+... .
T Consensus 143 ~dg~~lyv~ds---------------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l-~va~~---~ 203 (246)
T PF08450_consen 143 PDGKTLYVADS---------------FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNL-WVADW---G 203 (246)
T ss_dssp TTSSEEEEEET---------------TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-E-EEEEE---T
T ss_pred Ccchheeeccc---------------ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCE-EEEEc---C
Confidence 99999988762 234689888864432 12233343333223467889999973 33332 2
Q ss_pred CcEEEEEECCCCCCCcccCCCCceeeecC-ccceeEEE-EeeCCEEEEEEC
Q psy2521 341 GSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDHHHEII-ANNGPELIVKTT 389 (783)
Q Consensus 341 ~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~~~~~~-s~dg~~l~~~t~ 389 (783)
...|++++.++ . + ...+..+ .......| .++.+.||+++.
T Consensus 204 ~~~I~~~~p~G-~---~-----~~~i~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 204 GGRIVVFDPDG-K---L-----LREIELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp TTEEEEEETTS-C---E-----EEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred CCEEEEECCCc-c---E-----EEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence 36899999875 1 0 1111111 11112235 467788988764
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00065 Score=69.24 Aligned_cols=102 Identities=17% Similarity=0.151 Sum_probs=64.6
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.++++||.++.................. |.++.+|.||.|... .. ..........++.+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~----~~------~~~~~~~~~~~~~~~~~~~~-- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD----PA------GYSLSAYADDLAALLDALGL-- 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC----cc------cccHHHHHHHHHHHHHHhCC--
Confidence 459999999987765533311111212222 999999999854432 00 11112223333334333122
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.++.+.|||+||.++..++.++|+.++.+|...+.
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 34999999999999999999999998888887754
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.12 Score=51.69 Aligned_cols=199 Identities=13% Similarity=0.142 Sum_probs=103.1
Q ss_pred EEeeEEECCC-CcEEEEEEecCCCceEEEEEEECCCCccc--cccc---cccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDY--PEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPD-G~~la~~~~~~G~d~~~i~v~Dl~tg~~~--~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
.+-.++|+|- |..||-. +....|+++++.++... ...+ ..-..-+++|+|.|+.|+-.++|..
T Consensus 16 r~W~~awhp~~g~ilAsc-----g~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t------ 84 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASC-----GTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT------ 84 (312)
T ss_pred cEEEEEeccCCceEEEee-----cCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce------
Confidence 3667889998 8755422 23378999998754321 1111 1112358999999999888887642
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
+.++.-+.+.-+-+.+.+.+++. .=.++||++|++|+--+ + ...+|++..+.+ . +..-
T Consensus 85 ----------~~Iw~k~~~efecv~~lEGHEnE--VK~Vaws~sG~~LATCS-R---DKSVWiWe~ded--d----Efec 142 (312)
T KOG0645|consen 85 ----------VVIWKKEDGEFECVATLEGHENE--VKCVAWSASGNYLATCS-R---DKSVWIWEIDED--D----EFEC 142 (312)
T ss_pred ----------EEEeecCCCceeEEeeeeccccc--eeEEEEcCCCCEEEEee-C---CCeEEEEEecCC--C----cEEE
Confidence 22222222222223344544433 23789999999998543 2 257888888752 1 1112
Q ss_pred eeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecC
Q psy2521 364 KTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 364 ~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..++.+...+.. .|.|. ..|+|....+. .-++|+-+. ..+ |.-+..-+. ...+=...+.+.+.-++...++
T Consensus 143 ~aVL~~HtqDVK~V~WHPt-~dlL~S~SYDn-TIk~~~~~~-ddd---W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD 216 (312)
T KOG0645|consen 143 IAVLQEHTQDVKHVIWHPT-EDLLFSCSYDN-TIKVYRDED-DDD---WECVQTLDGHENTVWSLAFDNIGSRLVSCSDD 216 (312)
T ss_pred EeeeccccccccEEEEcCC-cceeEEeccCC-eEEEEeecC-CCC---eeEEEEecCccceEEEEEecCCCceEEEecCC
Confidence 223344333333 47665 34666555433 235665543 222 543322221 1122222222213233455566
Q ss_pred CeeEEEE
Q psy2521 441 VRSVMDL 447 (783)
Q Consensus 441 g~~~l~~ 447 (783)
+.-+|++
T Consensus 217 ~tv~Iw~ 223 (312)
T KOG0645|consen 217 GTVSIWR 223 (312)
T ss_pred cceEeee
Confidence 5555665
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.023 Score=58.00 Aligned_cols=63 Identities=17% Similarity=0.174 Sum_probs=41.2
Q ss_pred CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc--ccccccccccCeeEEeeCCCEEEEEEee
Q psy2521 207 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD--YPEVLKNVKFPSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 207 g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~--~~~~~~~~~~~~~~WspDg~~l~y~~~~ 275 (783)
|...++..+||||||.|.-.+.. ...|-||.+.|.+. ++-...+. -++++.|||+.-+..+..
T Consensus 90 g~agls~~~WSPdgrhiL~tseF----~lriTVWSL~t~~~~~~~~pK~~~--kg~~f~~dg~f~ai~sRr 154 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEF----DLRITVWSLNTQKGYLLPHPKTNV--KGYAFHPDGQFCAILSRR 154 (447)
T ss_pred CCCcceeeeECCCcceEeeeecc----eeEEEEEEeccceeEEecccccCc--eeEEECCCCceeeeeecc
Confidence 34458899999999999877643 24577777766553 32223333 477888888776665533
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.12 Score=54.43 Aligned_cols=252 Identities=18% Similarity=0.206 Sum_probs=122.0
Q ss_pred EeeEEECCCCcEEEEEEe-----cCCCceEEEEEEECCCCcccccc-cc-------ccccCeeEEeeCCCEEEEEEeecC
Q psy2521 211 LKLYAFSDNGKHFAYCLS-----KSGSDWNTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~-----~~G~d~~~i~v~Dl~tg~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
++.+.+||||+.+..... ..|...--|-++|.+|=.+..+. ++ ......++.|.|||.+++....+
T Consensus 38 ~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TP- 116 (342)
T PF06433_consen 38 LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTP- 116 (342)
T ss_dssp SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESS-
T ss_pred CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCC-
Confidence 346889999999875432 23444446889998875432211 11 11224678999999888776432
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC-CCCCc
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-LPDGK 356 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~-g~~~~ 356 (783)
...|-+.++.... .+-+ -+.|+-. .+.-+...++..+.. + ..+..+.++. |+..
T Consensus 117 -------------a~SVtVVDl~~~k----vv~e-i~~PGC~-~iyP~~~~~F~~lC~-D----Gsl~~v~Ld~~Gk~~- 171 (342)
T PF06433_consen 117 -------------ATSVTVVDLAAKK----VVGE-IDTPGCW-LIYPSGNRGFSMLCG-D----GSLLTVTLDADGKEA- 171 (342)
T ss_dssp -------------SEEEEEEETTTTE----EEEE-EEGTSEE-EEEEEETTEEEEEET-T----SCEEEEEETSTSSEE-
T ss_pred -------------CCeEEEEECCCCc----eeee-ecCCCEE-EEEecCCCceEEEec-C----CceEEEEECCCCCEe-
Confidence 2356667765431 1211 1112211 111122222222210 1 1222222221 1100
Q ss_pred ccCCCCceeeecCccc---eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC---CcEEeecCC---CCce--EEEE
Q psy2521 357 ISGKFPLKTVIPGMDH---HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK---NWKTLIPED---ENRT--LDVV 425 (783)
Q Consensus 357 l~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~---~~~~li~~~---~~~~--l~~~ 425 (783)
......+..... ....++.++.+++|.|- +++|+.+|+.+.... .|..+.... .+.. .+.+
T Consensus 172 ----~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy----~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~ 243 (342)
T PF06433_consen 172 ----QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSY----EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI 243 (342)
T ss_dssp ----EEEEEESSTTTS-B-S--EEETTTTEEEEEBT----TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E
T ss_pred ----EeeccccCCCCcccccccceECCCCeEEEEec----CCEEEEEeccCCcccccCcccccCccccccCcCCcceeee
Confidence 001112211111 11235566778998764 367999998764311 121111110 0111 0112
Q ss_pred EE-eeCCEEEEEEe-------cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 426 AA-VANNKLIVHYI-------QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 426 ~~-~~g~~l~~~~~-------~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
.+ ...++||+.-. +++-.+||++|+++++.+++|+++ ..+.++..+.+..=++|..+.- -..++.+|.
T Consensus 244 A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~--~~~l~v~D~- 319 (342)
T PF06433_consen 244 AYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAG--DGTLDVYDA- 319 (342)
T ss_dssp EEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETT--TTEEEEEET-
T ss_pred eeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCC--CCeEEEEeC-
Confidence 22 22367776543 234479999999999999999875 2333455556665555555432 257999999
Q ss_pred CCcCCCC
Q psy2521 498 ENITDQD 504 (783)
Q Consensus 498 ~~~~~tg 504 (783)
.+|
T Consensus 320 ----~tG 322 (342)
T PF06433_consen 320 ----ATG 322 (342)
T ss_dssp ----TT-
T ss_pred ----cCC
Confidence 577
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.027 Score=57.27 Aligned_cols=188 Identities=15% Similarity=0.133 Sum_probs=98.0
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc---ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
...||+-|.+||.+... ..+.+||..|-.. +...... ..+++||+||+.|+-++.
T Consensus 28 ~~~Fs~~G~~lAvGc~n-----G~vvI~D~~T~~iar~lsaH~~p--i~sl~WS~dgr~LltsS~--------------- 85 (405)
T KOG1273|consen 28 CCQFSRWGDYLAVGCAN-----GRVVIYDFDTFRIARMLSAHVRP--ITSLCWSRDGRKLLTSSR--------------- 85 (405)
T ss_pred eEEeccCcceeeeeccC-----CcEEEEEccccchhhhhhccccc--eeEEEecCCCCEeeeecC---------------
Confidence 47899999999998864 3488999887543 2222222 268999999988775552
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+-.+++-.+..-.+..|.. +- .++.|.|-.+..++..--. ..-+++++..... ..|..+
T Consensus 86 -D~si~lwDl~~gs~l~rirf~s---pv--~~~q~hp~k~n~~va~~~~---~sp~vi~~s~~~h---------~~Lp~d 147 (405)
T KOG1273|consen 86 -DWSIKLWDLLKGSPLKRIRFDS---PV--WGAQWHPRKRNKCVATIME---ESPVVIDFSDPKH---------SVLPKD 147 (405)
T ss_pred -CceeEEEeccCCCceeEEEccC---cc--ceeeeccccCCeEEEEEec---CCcEEEEecCCce---------eeccCC
Confidence 3356677775554333333432 22 3566666544333322111 1134555554110 111111
Q ss_pred ccc------eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE-EEeeCCEEEEEEecCCe
Q psy2521 370 MDH------HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV-AAVANNKLIVHYIQNVR 442 (783)
Q Consensus 370 ~~~------~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~-~~~~g~~l~~~~~~~g~ 442 (783)
.+. ...++.+.|++++.-+. .++|..++..+-+...+-.++.- ..+..+ ....|+.+++...+.
T Consensus 148 ~d~dln~sas~~~fdr~g~yIitGts----KGkllv~~a~t~e~vas~rits~---~~IK~I~~s~~g~~liiNtsDR-- 218 (405)
T KOG1273|consen 148 DDGDLNSSASHGVFDRRGKYIITGTS----KGKLLVYDAETLECVASFRITSV---QAIKQIIVSRKGRFLIINTSDR-- 218 (405)
T ss_pred CccccccccccccccCCCCEEEEecC----cceEEEEecchheeeeeeeechh---eeeeEEEEeccCcEEEEecCCc--
Confidence 111 11147788888875333 46788888776442222233321 122222 333445555554433
Q ss_pred eEEEEEEC
Q psy2521 443 SVMDLHDL 450 (783)
Q Consensus 443 ~~l~~~dl 450 (783)
.|+.|++
T Consensus 219 -vIR~ye~ 225 (405)
T KOG1273|consen 219 -VIRTYEI 225 (405)
T ss_pred -eEEEEeh
Confidence 3555554
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.046 Score=58.73 Aligned_cols=227 Identities=13% Similarity=0.167 Sum_probs=131.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+.+..|=.||+.+|- |++...+.|+|..+...+..- ..........|+|++..++.+..|+
T Consensus 71 v~s~~fR~DG~Llaa-----GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd------------- 132 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLAA-----GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDD------------- 132 (487)
T ss_pred eeEEEeecCCeEEEc-----cCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCC-------------
Confidence 677889999999885 455567999996664333211 1112223567899998888776443
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
..+.++++.+.. ..++...+.++.....|+|-..+|+++.+- ...|.++|+... . ++..-+.
T Consensus 133 --~v~k~~d~s~a~----v~~~l~~htDYVR~g~~~~~~~hivvtGsY---Dg~vrl~DtR~~-------~-~~v~eln- 194 (487)
T KOG0310|consen 133 --KVVKYWDLSTAY----VQAELSGHTDYVRCGDISPANDHIVVTGSY---DGKVRLWDTRSL-------T-SRVVELN- 194 (487)
T ss_pred --ceEEEEEcCCcE----EEEEecCCcceeEeeccccCCCeEEEecCC---CceEEEEEeccC-------C-ceeEEec-
Confidence 246677776653 244444445576788999999999886432 367888888761 1 1211111
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
.+...+ .+-|.|..|.- .+++ .+-.+|+.++. +.+..-. -...+..+.+..++.-+++..-|+ ++.
T Consensus 195 hg~pVe~vl~lpsgs~ias---AgGn--~vkVWDl~~G~----qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~--~VK 263 (487)
T KOG0310|consen 195 HGCPVESVLALPSGSLIAS---AGGN--SVKVWDLTTGG----QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR--HVK 263 (487)
T ss_pred CCCceeeEEEcCCCCEEEE---cCCC--eEEEEEecCCc----eehhhhhcccceEEEEEeecCCceEeeccccc--ceE
Confidence 111122 34566665542 2233 36667887554 2222111 122334444444344455554453 677
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSF 485 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~ 485 (783)
+||..+=+.+..+..| +.|-+++.++++..+++..++-
T Consensus 264 Vfd~t~~Kvv~s~~~~-~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 264 VFDTTNYKVVHSWKYP-GPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred EEEccceEEEEeeecc-cceeeEEecCCCceEEEecccc
Confidence 7786455666666665 4455777888888888766653
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.016 Score=64.12 Aligned_cols=238 Identities=13% Similarity=0.089 Sum_probs=140.6
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+.+.-+.|| ....||.+.. ..+|+|+..+|+.+.+... ....+++.|+++|+.|+....+
T Consensus 178 fY~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~------------ 238 (484)
T KOG0305|consen 178 FYLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSD------------ 238 (484)
T ss_pred HhhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecC------------
Confidence 446668899 5566887764 4699999999987665422 3345799999999999988732
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..|.++++.+..... -+... +......++|. ..++.. .. ....|...|+.... .... ..
T Consensus 239 ----g~v~iwD~~~~k~~~--~~~~~-h~~rvg~laW~---~~~lss-Gs--r~~~I~~~dvR~~~-------~~~~-~~ 297 (484)
T KOG0305|consen 239 ----GTVQIWDVKEQKKTR--TLRGS-HASRVGSLAWN---SSVLSS-GS--RDGKILNHDVRISQ-------HVVS-TL 297 (484)
T ss_pred ----CeEEEEehhhccccc--cccCC-cCceeEEEecc---CceEEE-ec--CCCcEEEEEEecch-------hhhh-hh
Confidence 257777766542211 11111 12234456776 222222 22 22456666665521 0011 12
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+...... .|++|+..|.--.| ...+..+|..... ....+..+. .++-...|.+-...|+++...-.-..|
T Consensus 298 ~~H~qeVCgLkws~d~~~lASGgn----DN~~~Iwd~~~~~--p~~~~~~H~-aAVKA~awcP~q~~lLAsGGGs~D~~i 370 (484)
T KOG0305|consen 298 QGHRQEVCGLKWSPDGNQLASGGN----DNVVFIWDGLSPE--PKFTFTEHT-AAVKALAWCPWQSGLLATGGGSADRCI 370 (484)
T ss_pred hcccceeeeeEECCCCCeeccCCC----ccceEeccCCCcc--ccEEEeccc-eeeeEeeeCCCccCceEEcCCCcccEE
Confidence 22233333 49999987764322 3458888874433 234555554 444444444433567777666666789
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEE
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~ 494 (783)
..||..+|+.++.+... ..|..+.|++..+++..+..-...--+||.|
T Consensus 371 ~fwn~~~g~~i~~vdtg-sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 371 KFWNTNTGARIDSVDTG-SQVCSLIWSKKYKELLSTHGYSENQITLWKY 418 (484)
T ss_pred EEEEcCCCcEecccccC-CceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence 99999888877766553 4577888999998988766443332234443
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.043 Score=56.72 Aligned_cols=121 Identities=13% Similarity=0.074 Sum_probs=71.2
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..+..+++||||+.+|+.... .+...|++....+...... .......++|+++|. ++......
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~--~~~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~-~W~v~~~~------------ 86 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEG--DGGRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGW-VWTVDDGS------------ 86 (253)
T ss_pred ccccceEECCCCCeEEEEEEc--CCCCEEEEEcCCCcceeec--cCCccccccccCCCC-EEEEEcCC------------
Confidence 347789999999999998833 3347899987655433322 333557899999964 54443111
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
....+.+ ...++....+ ....+....-+..+.+||||..+++..... +..+|++.-+.
T Consensus 87 -~~~~~~~-~~~~g~~~~~-~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~-~~~~v~va~V~ 144 (253)
T PF10647_consen 87 -GGVRVVR-DSASGTGEPV-EVDWPGLRGRITALRVSPDGTRVAVVVEDG-GGGRVYVAGVV 144 (253)
T ss_pred -CceEEEE-ecCCCcceeE-EecccccCCceEEEEECCCCcEEEEEEecC-CCCeEEEEEEE
Confidence 1112222 1111212211 122222111346899999999999988654 33788887654
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00059 Score=65.46 Aligned_cols=168 Identities=14% Similarity=0.086 Sum_probs=95.1
Q ss_pred cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH
Q psy2521 572 TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651 (783)
Q Consensus 572 ~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~ 651 (783)
.+...+...|+++|+.|+.+|-+- | -|. ...-+..-.|+...+++..++ -..+|+.++|+|+|+=++-.
T Consensus 16 ~~d~~~a~~l~~~G~~VvGvdsl~---Y--fw~----~rtP~~~a~Dl~~~i~~y~~~--w~~~~vvLiGYSFGADvlP~ 84 (192)
T PF06057_consen 16 DLDKQIAEALAKQGVPVVGVDSLR---Y--FWS----ERTPEQTAADLARIIRHYRAR--WGRKRVVLIGYSFGADVLPF 84 (192)
T ss_pred hhhHHHHHHHHHCCCeEEEechHH---H--Hhh----hCCHHHHHHHHHHHHHHHHHH--hCCceEEEEeecCCchhHHH
Confidence 356667788888999999999653 1 121 122234567888888877665 23469999999999999999
Q ss_pred HHhcCCCceeEEEEcCCcchhhhccccccc-ccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCC
Q psy2521 652 CLNQRPELYGAALILVGALDMLRFNKFTIA-YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDD 730 (783)
Q Consensus 652 ~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~-~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~ 730 (783)
+.++-|.-.++-|..+-++.+-....|..- ..| +|.+.... ++.+..-+++ +...+++++.|..|.
T Consensus 85 ~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~w---lg~~~~~~------~~~~~pei~~----l~~~~v~CiyG~~E~ 151 (192)
T PF06057_consen 85 IYNRLPAALRARVAQVVLLSPSTTADFEIHVSGW---LGMGGDDA------AYPVIPEIAK----LPPAPVQCIYGEDED 151 (192)
T ss_pred HHhhCCHHHHhheeEEEEeccCCcceEEEEhhhh---cCCCCCcc------cCCchHHHHh----CCCCeEEEEEcCCCC
Confidence 999988744444433333322222111110 112 23322211 1122222222 222249999998775
Q ss_pred CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 731 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
-.. .-.|. ...++....|| ||-|...-.+..+.
T Consensus 152 d~~-------cp~l~---------~~~~~~i~lpG-gHHfd~dy~~La~~ 184 (192)
T PF06057_consen 152 DSL-------CPSLR---------QPGVEVIALPG-GHHFDGDYDALAKR 184 (192)
T ss_pred CCc-------Ccccc---------CCCcEEEEcCC-CcCCCCCHHHHHHH
Confidence 421 11232 23456666665 78887765555443
|
VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium []. |
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.016 Score=67.78 Aligned_cols=114 Identities=12% Similarity=0.092 Sum_probs=71.8
Q ss_pred CcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEE-EEeecCCCCCCCCcccccCCceEEEE
Q psy2521 220 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFY-NQYCDINGTADGTETTAHMGQKIYYH 297 (783)
Q Consensus 220 G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y-~~~~~~~~~~~g~~~~~~~~~~v~~~ 297 (783)
..+|||..+..| .|.+.|.+++..... ........++.|||||+.|+| +++.. ..+...||++
T Consensus 318 ~tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~-----------~~g~s~vYv~ 382 (912)
T TIGR02171 318 KAKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEG-----------LPGKSSVYVR 382 (912)
T ss_pred eeeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecC-----------CCCCceEEEE
Confidence 346999987655 799999988776544 222333358999999999999 55322 1234579999
Q ss_pred EcCCCCCCceeEE-ecCCCCeeEEEEEEecCCcEEEEEEecCCCC--------cEEEEEECCCC
Q psy2521 298 VLGTEQDKDIPVV-EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG--------SDLHYFDLHSL 352 (783)
Q Consensus 298 ~lgt~~~~d~~v~-~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~--------~~l~~~dl~~g 352 (783)
+|.+.....+.+- +...-|.| .+.+.|..+++...+.... ..-|.+..+.|
T Consensus 383 ~L~t~~~~~vkl~ve~aaiprw----rv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~g 442 (912)
T TIGR02171 383 NLNASGSGLVKLPVENAAIPRW----RVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANG 442 (912)
T ss_pred ehhccCCCceEeecccccccce----EecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCC
Confidence 9998765533221 11222333 4577787766555432221 34677877775
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.27 Score=55.18 Aligned_cols=158 Identities=11% Similarity=0.119 Sum_probs=90.9
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-----ccceeEEEEeeCCEEEEEECCC
Q psy2521 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-----MDHHHEIIANNGPELIVKTTKN 391 (783)
Q Consensus 317 ~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-----~~~~~~~~s~dg~~l~~~t~~~ 391 (783)
..+...+.||||.+|++..-. ...||.+.-.. ++ ... .+.. .....-.++-|++.+++.+..
T Consensus 383 ~nIs~~aiSPdg~~Ia~st~~---~~~iy~L~~~~----~v----k~~-~v~~~~~~~~~a~~i~ftid~~k~~~~s~~- 449 (691)
T KOG2048|consen 383 ENISCAAISPDGNLIAISTVS---RTKIYRLQPDP----NV----KVI-NVDDVPLALLDASAISFTIDKNKLFLVSKN- 449 (691)
T ss_pred cceeeeccCCCCCEEEEeecc---ceEEEEeccCc----ce----eEE-EeccchhhhccceeeEEEecCceEEEEecc-
Confidence 355677899999999986532 24555554332 10 011 1111 122222588898888887732
Q ss_pred CCCceEEEEcCCCCCCCCcEEeecCCCCceE-EEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec-CCCeEEEee
Q psy2521 392 APKGKVVTINLNNPCEKNWKTLIPEDENRTL-DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHI 469 (783)
Q Consensus 392 ~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l-~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-~~~g~v~~~ 469 (783)
.+.|..+++.++.......+.+...-..+ .-+.+.+|++|++.. +.+.|++|++++++. +.+. ...-.++..
T Consensus 450 --~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~~-~~l~~rln~~vTa~ 523 (691)
T KOG2048|consen 450 --IFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLES-HLLKVRLNIDVTAA 523 (691)
T ss_pred --cceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEccccee-ecchhccCcceeee
Confidence 35688888887764334444444222223 344566778888876 456799999976554 4443 222223333
Q ss_pred ecc-ccccEEEEEEecCCCCceEEEEeCC
Q psy2521 470 SGR-RKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 470 s~~-~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
... +..+.+++..++ .++|.+|++
T Consensus 524 ~~~~~~~~~lvvats~----nQv~efdi~ 548 (691)
T KOG2048|consen 524 AFSPFVRNRLVVATSN----NQVFEFDIE 548 (691)
T ss_pred eccccccCcEEEEecC----CeEEEEecc
Confidence 334 344667776655 379999993
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.046 Score=54.29 Aligned_cols=223 Identities=10% Similarity=0.103 Sum_probs=115.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-c--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-K--NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|.-||++||-+.. ..++.|++++.++.+.... . ......+.|.|-..-++.+...+
T Consensus 22 ~v~Sv~wn~~g~~lasgs~-----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~d---------- 86 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGSF-----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGD---------- 86 (313)
T ss_pred cceEEEEcccCceeeeccc-----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCC----------
Confidence 3677899999999996543 2467788887765433211 1 11224678988776666666322
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
..+.++++-+.... ...+...+ ...+.|||||+++++... ..+|-.+|..+- ++....+.
T Consensus 87 -----k~ir~wd~r~~k~~--~~i~~~~e---ni~i~wsp~g~~~~~~~k----dD~it~id~r~~---~~~~~~~~--- 146 (313)
T KOG1407|consen 87 -----KTIRIWDIRSGKCT--ARIETKGE---NINITWSPDGEYIAVGNK----DDRITFIDARTY---KIVNEEQF--- 146 (313)
T ss_pred -----ceEEEEEeccCcEE--EEeeccCc---ceEEEEcCCCCEEEEecC----cccEEEEEeccc---ceeehhcc---
Confidence 25667776544222 11222221 256899999999987532 257888887661 00000000
Q ss_pred ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 367 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
.....-..|..+ ..++|+++..+ .-.|..+.. -+ ..+.+-.+. -.-+---..++|++++ +...| ..+.
T Consensus 147 --~~e~ne~~w~~~-nd~Fflt~GlG-~v~ILsyps--Lk--pv~si~AH~-snCicI~f~p~GryfA-~GsAD--AlvS 214 (313)
T KOG1407|consen 147 --KFEVNEISWNNS-NDLFFLTNGLG-CVEILSYPS--LK--PVQSIKAHP-SNCICIEFDPDGRYFA-TGSAD--ALVS 214 (313)
T ss_pred --cceeeeeeecCC-CCEEEEecCCc-eEEEEeccc--cc--cccccccCC-cceEEEEECCCCceEe-ecccc--ceee
Confidence 011111136544 45777777533 234555542 11 234555554 2233222334434444 44444 4678
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
+||++.=--+|.|+--++.|..++.+.++..+.
T Consensus 215 LWD~~ELiC~R~isRldwpVRTlSFS~dg~~lA 247 (313)
T KOG1407|consen 215 LWDVDELICERCISRLDWPVRTLSFSHDGRMLA 247 (313)
T ss_pred ccChhHhhhheeeccccCceEEEEeccCcceee
Confidence 888832111244443234455555666665554
|
|
| >COG4947 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00072 Score=62.40 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=78.7
Q ss_pred HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHh
Q psy2521 623 AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLS 702 (783)
Q Consensus 623 ~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 702 (783)
-.|++++- =|.+..+.|.|+||+.++....++|++|..+|+.+|+.|...+.. .--+.+.+ -
T Consensus 91 erYv~eEa--lpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg------------~yyddDv~----y 152 (227)
T COG4947 91 ERYVIEEA--LPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFG------------GYYDDDVY----Y 152 (227)
T ss_pred HHHHHHhh--cCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhcc------------ccccCcee----e
Confidence 44666663 356789999999999999999999999999999999999876532 11010000 0
Q ss_pred cCcccCCCCCCCCCcCC---------cEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 703 YSPLHNIKVPPNNTQYP---------ATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 703 ~sp~~~v~~~~~~~~~P---------~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.||.+.+.. +..| .+.+++|+.|+..+ +..++-+.|... ..|..+.+..+..|-.+
T Consensus 153 nsP~dylpg----~~dp~~l~rlr~~~~vfc~G~e~~~L~--~~~~L~~~l~dK-------qipaw~~~WggvaHdw~ 217 (227)
T COG4947 153 NSPSDYLPG----LADPFRLERLRRIDMVFCIGDEDPFLD--NNQHLSRLLSDK-------QIPAWMHVWGGVAHDWG 217 (227)
T ss_pred cChhhhccC----CcChHHHHHHhhccEEEEecCcccccc--chHHHHHHhccc-------cccHHHHHhcccccccH
Confidence 233332221 1111 27888999887765 445677777766 67777777766666543
|
|
| >KOG3253|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0034 Score=69.10 Aligned_cols=172 Identities=15% Similarity=0.065 Sum_probs=99.4
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCC--EEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH--c
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN--GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN--K 629 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G--~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~--~ 629 (783)
..|+++..||++.......|...+...|.-.| .-+..+|++-.-+ | .+-....+-.+...++.+. .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig-G---------~nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG-G---------ANIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC-C---------cchHHHHHHHHHHhhhhhhhhh
Confidence 46899999998833333334444444454334 3345556653110 0 1111112222333332221 1
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCC
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v 709 (783)
+-.--..|.++|+|+|..++..+....-|.|-.++.+-++.+-.- .+. -|.+++ ++..+
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~v-----dgp-----rgirDE-----------~Lldm 303 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTV-----DGP-----RGIRDE-----------ALLDM 303 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCC-----Ccc-----cCCcch-----------hhHhc
Confidence 223346899999999988888777666666544444444332100 000 022221 11234
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
+. | +|++.|.+|.++++..-.++.+++|+. +++++..+++|.+.-+.
T Consensus 304 k~-------P-VLFV~Gsnd~mcspn~ME~vreKMqA~----------~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 304 KQ-------P-VLFVIGSNDHMCSPNSMEEVREKMQAE----------VELHVIGGADHSMAIPK 350 (784)
T ss_pred CC-------c-eEEEecCCcccCCHHHHHHHHHHhhcc----------ceEEEecCCCccccCCc
Confidence 44 4 999999999999999999999999876 57999999999986443
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.069 Score=56.63 Aligned_cols=183 Identities=12% Similarity=0.194 Sum_probs=108.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc---ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+.+.+..|.|.|+..+.++ ..+-..|..+|..+.-. ..++.+++.+|.||| +.|...-
T Consensus 306 V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDg--Lifgtgt------------ 366 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDG--LIFGTGT------------ 366 (506)
T ss_pred ceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCc--eEEeccC------------
Confidence 5778899999999877543 45778888888765322 233456789999997 5555521
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
.+..|.+|++.... .+.-| |.+..-.-.+.+|.+|=||+....+ ..|.++|+... .. ++.+.
T Consensus 367 --~d~~vkiwdlks~~--~~a~F--pght~~vk~i~FsENGY~Lat~add----~~V~lwDLRKl--~n------~kt~~ 428 (506)
T KOG0289|consen 367 --PDGVVKIWDLKSQT--NVAKF--PGHTGPVKAISFSENGYWLATAADD----GSVKLWDLRKL--KN------FKTIQ 428 (506)
T ss_pred --CCceEEEEEcCCcc--ccccC--CCCCCceeEEEeccCceEEEEEecC----CeEEEEEehhh--cc------cceee
Confidence 13367788887543 22223 2222234578999999999876543 35999999772 11 22222
Q ss_pred c-CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCc-eEEEEEEeeCCEEEEEE
Q psy2521 368 P-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR-TLDVVAAVANNKLIVHY 437 (783)
Q Consensus 368 ~-~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~-~l~~~~~~~g~~l~~~~ 437 (783)
. ....... .|+..|..|.+. +..-+||.++-.+. +|+.+..-.+.. ....+++.+...+++..
T Consensus 429 l~~~~~v~s~~fD~SGt~L~~~----g~~l~Vy~~~k~~k---~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~ 494 (506)
T KOG0289|consen 429 LDEKKEVNSLSFDQSGTYLGIA----GSDLQVYICKKKTK---SWTEIKELADHSGLSTGVRFGEHAQYLAST 494 (506)
T ss_pred ccccccceeEEEcCCCCeEEee----cceeEEEEEecccc---cceeeehhhhcccccceeeecccceEEeec
Confidence 1 1111112 377778877764 33456777775544 388765544222 23345554423333333
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.038 Score=60.23 Aligned_cols=264 Identities=14% Similarity=0.096 Sum_probs=140.7
Q ss_pred CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc----ccccccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 207 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----EVLKNVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 207 g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
..+.-..+.|||-|.||+- ....| |-+| +|+... -.-.++ ..+.|||..++|+--+. .+..
T Consensus 209 enWTetyv~wSP~GTYL~t-~Hk~G-----I~lW---GG~~f~r~~RF~Hp~V--q~idfSP~EkYLVT~s~-~p~~--- 273 (698)
T KOG2314|consen 209 ENWTETYVRWSPKGTYLVT-FHKQG-----IALW---GGESFDRIQRFYHPGV--QFIDFSPNEKYLVTYSP-EPII--- 273 (698)
T ss_pred hcceeeeEEecCCceEEEE-Eeccc-----eeee---cCccHHHHHhccCCCc--eeeecCCccceEEEecC-Cccc---
Confidence 3567778999999999863 33323 3444 454211 111233 46789999998864432 2211
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCC--eeEEEEEEecCCcEEEEEEecCC---CCcEEEEEECCCCCCCcc
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR--SLGLHSEVTDCGRYLLVSTSNNT---QGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~--~~~~~~~~SpDGk~l~~~~~~~~---~~~~l~~~dl~~g~~~~l 357 (783)
.+.+....+++.+|++.|+.... -|..+..+ .| --+.||-|+||++-....+- +.....++|..+-....+
T Consensus 274 -~~~~d~e~~~l~IWDI~tG~lkr--sF~~~~~~~~~W-P~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gI 349 (698)
T KOG2314|consen 274 -VEEDDNEGQQLIIWDIATGLLKR--SFPVIKSPYLKW-PIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGI 349 (698)
T ss_pred -cCcccCCCceEEEEEccccchhc--ceeccCCCcccc-ceEEeccCCceeEEeccceEEEEecCceeeecccccCCccc
Confidence 11123456789999998875332 22222222 12 24678888888875433211 112234444332111111
Q ss_pred c------------------CCCCce---------------eeecCccceeEEEEeeCCEEEEEECCCC--------CCce
Q psy2521 358 S------------------GKFPLK---------------TVIPGMDHHHEIIANNGPELIVKTTKNA--------PKGK 396 (783)
Q Consensus 358 ~------------------~~~~~~---------------~l~~~~~~~~~~~s~dg~~l~~~t~~~~--------~~~~ 396 (783)
+ .+.|.+ .++.-.+ .-..|...|++|.|..++.. .|..
T Consensus 350 r~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsD-ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~e 428 (698)
T KOG2314|consen 350 RDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSD-CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLE 428 (698)
T ss_pred cCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeec-cEEEeccCCcEEEEEEEeeccccccceEeeEE
Confidence 0 011100 0111001 11158888999999877531 2456
Q ss_pred EEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECC-CCceeeee-cCCCeEEEeeecccc
Q psy2521 397 VVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN-TGKRLHSF-PLDLGQITHISGRRK 474 (783)
Q Consensus 397 L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~-~G~~~~~l-~~~~g~v~~~s~~~d 474 (783)
|++++-..- ..+.++-. +.++...|-+.|+++++.........+..|-.+ ++.....+ .++.-....+.++|.
T Consensus 429 IfrireKdI----pve~velk-e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPk 503 (698)
T KOG2314|consen 429 IFRIREKDI----PVEVVELK-ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPK 503 (698)
T ss_pred EEEeeccCC----Cceeeecc-hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCC
Confidence 666664321 23444444 567777788888888888887777777777764 33322222 244334456778898
Q ss_pred ccEEEEEEecCCCCceEEEEeC
Q psy2521 475 YNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 475 ~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|.-+++..-. .+-+.++-||+
T Consensus 504 G~fvvva~l~-s~~g~l~F~D~ 524 (698)
T KOG2314|consen 504 GRFVVVAALV-SRRGDLEFYDT 524 (698)
T ss_pred CcEEEEEEec-ccccceEEEec
Confidence 8765543221 15567888887
|
|
| >KOG4389|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00051 Score=73.74 Aligned_cols=114 Identities=26% Similarity=0.289 Sum_probs=75.9
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHH-cCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc---CC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KY 631 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~ 631 (783)
-++|++|||.-.+.+++....-...|+ ....+|+.+|||-|- +|--+........+...+-|..-|++|+.++ --
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 399999998544444443222223343 336889999999643 5522111111223344577999999999875 23
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCcch
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALD 671 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~~d 671 (783)
.||+||.++|.|+|+.-+.+-+.. |- +|+-+|+++|-++
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CCcceEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCC
Confidence 699999999999999887666543 43 8999999998654
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.05 Score=58.85 Aligned_cols=229 Identities=16% Similarity=0.146 Sum_probs=133.3
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc---ccccccCeeEEeeCC--CEEEEEEeecCCCCCCCCccc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---LKNVKFPSISWTHDH--KGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~---~~~~~~~~~~WspDg--~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-+.||-|.+++|+.+. ..|+|.++ |+..-+.. +....+..++|||-| +.|+|..- +.
T Consensus 136 ~~k~s~~D~y~ARvv~------~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tP-Ek---------- 197 (561)
T COG5354 136 VLKFSIDDKYVARVVG------SSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTP-EK---------- 197 (561)
T ss_pred eeeeeecchhhhhhcc------CeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEcc-cc----------
Confidence 4789999999999863 35889987 54332211 121223689999974 55666651 11
Q ss_pred ccCCceEEEEEcCCCCCCc-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-----C--CcEEEEEECCCCCCCcccC
Q psy2521 288 AHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-----Q--GSDLHYFDLHSLPDGKISG 359 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d-~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~-----~--~~~l~~~dl~~g~~~~l~~ 359 (783)
.+.+..+..+.++...... ..++.. ..+.+.|-+.|++|++...+.. . .+.||++++...
T Consensus 198 ~~kpa~~~i~sIp~~s~l~tk~lfk~-----~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~------- 265 (561)
T COG5354 198 LNKPAMVRILSIPKNSVLVTKNLFKV-----SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER------- 265 (561)
T ss_pred CCCCcEEEEEEccCCCeeeeeeeEee-----cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc-------
Confidence 2445667777776332111 112222 1257889999999988765432 1 178999999762
Q ss_pred CCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 360 KFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 360 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
+.+...... +.... .|+|+++++.+.+... ...+..+|+.+ +.+-.+|++....+ +..+.++++++..-
T Consensus 266 ~i~V~~~~~--~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~----Nl~~~~Pe~~rNT~--~fsp~~r~il~agF 335 (561)
T COG5354 266 SIPVEKDLK--DPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRG----NLRFYFPEQKRNTI--FFSPHERYILFAGF 335 (561)
T ss_pred ccceecccc--ccceeeeecccCCceeEEeccc--ccceeeccccc----ceEEecCCcccccc--cccCcccEEEEecC
Confidence 233221111 22222 3999999999887432 22355566654 25667777755543 33344478888887
Q ss_pred cCCeeEEEEEECCCCceee--eecCCCeEEEeeeccccccEEEEEEec
Q psy2521 439 QNVRSVMDLHDLNTGKRLH--SFPLDLGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~--~l~~~~g~v~~~s~~~d~~~l~~~~ss 484 (783)
.+-...+.+++. .|+..- .+..... +...++||+.-+...++|
T Consensus 336 ~nl~gni~i~~~-~~rf~~~~~~~~~n~--s~~~wspd~qF~~~~~ts 380 (561)
T COG5354 336 DNLQGNIEIFDP-AGRFKVAGAFNGLNT--SYCDWSPDGQFYDTDTTS 380 (561)
T ss_pred CccccceEEecc-CCceEEEEEeecCCc--eEeeccCCceEEEecCCC
Confidence 777788999998 465421 2222222 233567776544444443
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.057 Score=59.09 Aligned_cols=237 Identities=16% Similarity=0.104 Sum_probs=136.5
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
.++||+|..+.|..+. ..++++++.+-+...-.+.....+.++.||.+.--+...+-... ..-+.
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~---------kGaPa 194 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEK---------KGAPA 194 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCC---------CCCCc
Confidence 4789999999888774 45888888663322222333344788999886544433332211 23455
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC--------CcEEEEEECCCCCCCcccCCCCce
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--------GSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~--------~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.|.++......... .+-...--..--+...|.+-|.-|++.....-+ .+.||+++.++ .. -..
T Consensus 195 ~vri~~~~~~~~~~-~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g-~s-------~~V 265 (566)
T KOG2315|consen 195 SVRIYKYPEEGQHQ-PVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG-ES-------VSV 265 (566)
T ss_pred EEEEeccccccccc-hhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC-ce-------EEE
Confidence 66666655211111 111000000012567899999988776542111 27899999885 11 112
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
.+.. ....+. .|+++|+.|.++-.- --.++-.+|+.+. ..--+++++...+ ++.+.|+.|++..-.+-..
T Consensus 266 ~L~k-~GPVhdv~W~~s~~EF~VvyGf--MPAkvtifnlr~~----~v~df~egpRN~~--~fnp~g~ii~lAGFGNL~G 336 (566)
T KOG2315|consen 266 PLLK-EGPVHDVTWSPSGREFAVVYGF--MPAKVTIFNLRGK----PVFDFPEGPRNTA--FFNPHGNIILLAGFGNLPG 336 (566)
T ss_pred ecCC-CCCceEEEECCCCCEEEEEEec--ccceEEEEcCCCC----EeEeCCCCCccce--EECCCCCEEEEeecCCCCC
Confidence 2222 122233 499999998876532 2235777787653 2344556544433 4555668888888888889
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEec
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss 484 (783)
.+.+||..+-+.+..+..... +-+.|+||+..++-..++
T Consensus 337 ~mEvwDv~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 337 DMEVWDVPNRKLIAKFKAANT--TVFEWSPDGEYFLTATTA 375 (566)
T ss_pred ceEEEeccchhhccccccCCc--eEEEEcCCCcEEEEEecc
Confidence 999999976444444433332 357889998777654444
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.071 Score=55.39 Aligned_cols=201 Identities=14% Similarity=0.126 Sum_probs=115.1
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+-++-.++++|+.+++|- |++...-++|++.+|+..-+.. ..-......||-||..|+-..
T Consensus 64 ~~svFavsl~P~~~l~aT-----GGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGd------------- 125 (399)
T KOG0296|consen 64 TDSVFAVSLHPNNNLVAT-----GGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGD------------- 125 (399)
T ss_pred CCceEEEEeCCCCceEEe-----cCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecC-------------
Confidence 456788999997776652 3333557899999998543221 222346789999997554222
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
-..+|.+++..++..+- .+.++-.+ ..-..|.|-+..|+.-. ....+|++.+..+ ..-++
T Consensus 126 ---msG~v~v~~~stg~~~~-~~~~e~~d---ieWl~WHp~a~illAG~----~DGsvWmw~ip~~---------~~~kv 185 (399)
T KOG0296|consen 126 ---MSGKVLVFKVSTGGEQW-KLDQEVED---IEWLKWHPRAHILLAGS----TDGSVWMWQIPSQ---------ALCKV 185 (399)
T ss_pred ---CCccEEEEEcccCceEE-EeecccCc---eEEEEecccccEEEeec----CCCcEEEEECCCc---------ceeeE
Confidence 23468888887764332 23322222 23478999887776533 3368999998762 12344
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
..+...... -+.|||+++.-... ++.|..+++.++.+ .-. +...+...+..+.......+++....++ .
T Consensus 186 ~~Gh~~~ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg~p--~~~-~~~~e~~~~~~~~~~~~~~~~~~g~~e~--~ 256 (399)
T KOG0296|consen 186 MSGHNSPCTCGEFIPDGKRILTGYD----DGTIIVWNPKTGQP--LHK-ITQAEGLELPCISLNLAGSTLTKGNSEG--V 256 (399)
T ss_pred ecCCCCCcccccccCCCceEEEEec----CceEEEEecCCCce--eEE-ecccccCcCCccccccccceeEeccCCc--c
Confidence 555443332 48899998886544 45699999988652 111 2211122222223222245666555554 3
Q ss_pred EEEEECCCCce
Q psy2521 445 MDLHDLNTGKR 455 (783)
Q Consensus 445 l~~~dl~~G~~ 455 (783)
++..+..+||.
T Consensus 257 ~~~~~~~sgKV 267 (399)
T KOG0296|consen 257 ACGVNNGSGKV 267 (399)
T ss_pred EEEEccccceE
Confidence 34444445554
|
|
| >COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0025 Score=67.13 Aligned_cols=213 Identities=16% Similarity=0.110 Sum_probs=108.8
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--CCCCCCChhHHhhccccCCcC
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~G~~~~~~g~~~~~~~ 614 (783)
..+.+.+..|++....++.|.++..||.......... ....++..++.++..+. +|....-...... ...
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~ 102 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLG---YAVLLAEKGYRVLAGDASLFGESGGDPRGLAD-----SEG 102 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcch---HHHHhhhceeEEeeeccccccccccccccccC-----ccc
Confidence 5678888888875444689999999997665543222 33455556787776654 2111110000000 000
Q ss_pred hHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCC-----cchhhhcc-
Q psy2521 615 CFDDFQAAAEYMINK---------KYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVG-----ALDMLRFN- 676 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~---------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~-----~~d~~~~~- 676 (783)
...++.......... .....++..+.|.+.||..+..++...+. .-+.++...+ .+......
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~ 182 (299)
T COG1073 103 YAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANP 182 (299)
T ss_pred cccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccch
Confidence 011111111111110 11223577888888888888877776652 1111111111 11100000
Q ss_pred -ccc-ccccchh-----hh-CCC-----CCHHHHHHHHhcCcccCCCCCCCCCc-CCcEEEEecCCCCCCCcHHHHHHHH
Q psy2521 677 -KFT-IAYYSES-----EF-GSP-----NNKTHFHNLLSYSPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLHSYKFIA 742 (783)
Q Consensus 677 -~~~-~~~~~~~-----~~-g~p-----~~~~~~~~~~~~sp~~~v~~~~~~~~-~P~~Li~~g~~D~~V~~~~~~~~~~ 742 (783)
... ....+.. .. +.+ .... ...+...+++..+.. +. .| +|++||..|..||+.++.+++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~----i~~~P-~l~~~G~~D~~vp~~~~~~~~~ 256 (299)
T COG1073 183 ELARELIDYLITPGGFAPLPAPEAPLDTLPLR-AVLLLLLDPFDDAEK----ISPRP-VLLVHGERDEVVPLRDAEDLYE 256 (299)
T ss_pred HHHHhhhhhhccCCCCCCCCcccccccccccc-hhhhccCcchhhHhh----cCCcc-eEEEecCCCcccchhhhHHHHh
Confidence 000 0000000 00 000 0001 122455556666655 33 45 9999999999999999999988
Q ss_pred HHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 743 TLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 743 ~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+.+.. +....++++++|....
T Consensus 257 ~~~~~---------~~~~~~~~~~~H~~~~ 277 (299)
T COG1073 257 AARER---------PKKLLFVPGGGHIDLY 277 (299)
T ss_pred hhccC---------CceEEEecCCcccccc
Confidence 87642 5678888999998774
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.071 Score=54.32 Aligned_cols=216 Identities=11% Similarity=0.141 Sum_probs=105.5
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
...+..++||+||++|.-++. | ..|.+||+..|..+.......-..+..|.|-.+..+....-+.
T Consensus 65 ~~pi~sl~WS~dgr~LltsS~----D-~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~---------- 129 (405)
T KOG1273|consen 65 VRPITSLCWSRDGRKLLTSSR----D-WSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEE---------- 129 (405)
T ss_pred ccceeEEEecCCCCEeeeecC----C-ceeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecC----------
Confidence 456889999999999876543 2 4689999999986543322222245667775544444442111
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEE---EEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS---EVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~---~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.-++..++.+ ...++-..++. .....+ .+.+.|++|+. ++....+.+++..+.+. ..+-
T Consensus 130 -----sp~vi~~s~~--~h~~Lp~d~d~-dln~sas~~~fdr~g~yIit----GtsKGkllv~~a~t~e~------vas~ 191 (405)
T KOG1273|consen 130 -----SPVVIDFSDP--KHSVLPKDDDG-DLNSSASHGVFDRRGKYIIT----GTSKGKLLVYDAETLEC------VASF 191 (405)
T ss_pred -----CcEEEEecCC--ceeeccCCCcc-ccccccccccccCCCCEEEE----ecCcceEEEEecchhee------eeee
Confidence 1223333321 11222222221 112222 37788999874 33446888999887311 1111
Q ss_pred eeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCC---CCCC----C---CcEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 365 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN---NPCE----K---NWKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~---~~~~----~---~~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
+++.......-.++-.|+.|++.+... -|-.+++. .... + +.+.++....+... ..+.+|.+++
T Consensus 192 rits~~~IK~I~~s~~g~~liiNtsDR----vIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~c--cfs~dgeYv~ 265 (405)
T KOG1273|consen 192 RITSVQAIKQIIVSRKGRFLIINTSDR----VIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKC--CFSGDGEYVC 265 (405)
T ss_pred eechheeeeEEEEeccCcEEEEecCCc----eEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhe--eecCCccEEE
Confidence 122200100113677788777755431 12223322 1110 0 01111111111111 1222333444
Q ss_pred EEEecCCeeEEEEEECCCCceeeeecCCCe
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRLHSFPLDLG 464 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g 464 (783)
..+ .-...||+|....|..++-|..+.|
T Consensus 266 a~s--~~aHaLYIWE~~~GsLVKILhG~kg 293 (405)
T KOG1273|consen 266 AGS--ARAHALYIWEKSIGSLVKILHGTKG 293 (405)
T ss_pred ecc--ccceeEEEEecCCcceeeeecCCch
Confidence 433 3346799999877887776655543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.39 Score=50.04 Aligned_cols=218 Identities=16% Similarity=0.126 Sum_probs=109.1
Q ss_pred eEEECC-CCcEEEEEEecCCCceEEEEEEECCCCcccccc-c--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 213 LYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-L--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 213 ~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+++.+| ++.-++|. .+-| ..+.++|..+|+.+... . ...-++.-.|||||+.||-+..+- .
T Consensus 9 ~~a~~p~~~~avafa-RRPG---~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~-----------~ 73 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFA-RRPG---TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDY-----------E 73 (305)
T ss_pred ceeeCCCCCeEEEEE-eCCC---cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEecccc-----------C
Confidence 578899 45445554 4445 35889999999865422 1 222346789999998776554322 1
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC---------------CcEEEEEECCCCC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ---------------GSDLHYFDLHSLP 353 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~---------------~~~l~~~dl~~g~ 353 (783)
.....|-+++.... -..+-+.+....--..+.+.|||+.|++... +.. ...|-++|..+|.
T Consensus 74 ~g~G~IgVyd~~~~---~~ri~E~~s~GIGPHel~l~pDG~tLvVANG-GI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ 149 (305)
T PF07433_consen 74 TGRGVIGVYDAARG---YRRIGEFPSHGIGPHELLLMPDGETLVVANG-GIETHPDSGRAKLNLDTMQPSLVYLDARSGA 149 (305)
T ss_pred CCcEEEEEEECcCC---cEEEeEecCCCcChhhEEEcCCCCEEEEEcC-CCccCcccCceecChhhcCCceEEEecCCCc
Confidence 22334556665421 1122222211100024678999999987532 110 1446667666642
Q ss_pred CCcccCCCCceeeecC-ccceeE--EEEeeCCEEEEEECCCCC---Cc-eEEEEcCCCCCCCCcEEeecCC------CCc
Q psy2521 354 DGKISGKFPLKTVIPG-MDHHHE--IIANNGPELIVKTTKNAP---KG-KVVTINLNNPCEKNWKTLIPED------ENR 420 (783)
Q Consensus 354 ~~~l~~~~~~~~l~~~-~~~~~~--~~s~dg~~l~~~t~~~~~---~~-~L~~~d~~~~~~~~~~~li~~~------~~~ 420 (783)
+ .....+-.. ..-+.. .++++|. ++|-....+. .- -|...+..+ . .+ +++.. -..
T Consensus 150 ---l---l~q~~Lp~~~~~lSiRHLa~~~~G~-V~~a~Q~qg~~~~~~PLva~~~~g~-~---~~-~~~~p~~~~~~l~~ 217 (305)
T PF07433_consen 150 ---L---LEQVELPPDLHQLSIRHLAVDGDGT-VAFAMQYQGDPGDAPPLVALHRRGG-A---LR-LLPAPEEQWRRLNG 217 (305)
T ss_pred ---e---eeeeecCccccccceeeEEecCCCc-EEEEEecCCCCCccCCeEEEEcCCC-c---ce-eccCChHHHHhhCC
Confidence 1 111111111 111222 4666654 4443322211 11 133333222 1 11 12211 124
Q ss_pred eEEEEEEeeCC-EEEEEEecCCeeEEEEEECCCCceeeeecCCC
Q psy2521 421 TLDVVAAVANN-KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDL 463 (783)
Q Consensus 421 ~l~~~~~~~g~-~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~ 463 (783)
.+.++.+..++ .+++++-+. ..+.+||.++|+.+..+.+++
T Consensus 218 Y~gSIa~~~~g~~ia~tsPrG--g~~~~~d~~tg~~~~~~~l~D 259 (305)
T PF07433_consen 218 YIGSIAADRDGRLIAVTSPRG--GRVAVWDAATGRLLGSVPLPD 259 (305)
T ss_pred ceEEEEEeCCCCEEEEECCCC--CEEEEEECCCCCEeeccccCc
Confidence 45566655534 455555554 467788998999888888873
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.31 Score=56.60 Aligned_cols=236 Identities=13% Similarity=0.155 Sum_probs=133.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEE-eeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISW-THDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~W-spDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..++|.|||+.| ++...+| .|++++.-.-+..++++.... ..+.| +-++..|+-.+
T Consensus 16 ~t~i~~d~~gefi-~tcgsdg----~ir~~~~~sd~e~P~ti~~~g-~~v~~ia~~s~~f~~~s---------------- 73 (933)
T KOG1274|consen 16 LTLICYDPDGEFI-CTCGSDG----DIRKWKTNSDEEEPETIDISG-ELVSSIACYSNHFLTGS---------------- 73 (933)
T ss_pred eEEEEEcCCCCEE-EEecCCC----ceEEeecCCcccCCchhhccC-ceeEEEeecccceEEee----------------
Confidence 6678999999954 4444333 477887655444455554221 12333 33444444333
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
..+.|.++..+..+.+.. +...+- + .....++-+|+++++.+ +...|-++++.+.. ....+.+
T Consensus 74 ~~~tv~~y~fps~~~~~i-L~Rftl-p--~r~~~v~g~g~~iaags----dD~~vK~~~~~D~s---------~~~~lrg 136 (933)
T KOG1274|consen 74 EQNTVLRYKFPSGEEDTI-LARFTL-P--IRDLAVSGSGKMIAAGS----DDTAVKLLNLDDSS---------QEKVLRG 136 (933)
T ss_pred ccceEEEeeCCCCCccce-eeeeec-c--ceEEEEecCCcEEEeec----CceeEEEEeccccc---------hheeecc
Confidence 234688889888765433 322111 1 23578899999998643 33678888887731 1122333
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC-CcEEeecCCCC----ceEEEEEEeeCCEEEEEEecCCe
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDEN----RTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~-~~~~li~~~~~----~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
.++... .++|.+..|...+- ++.|..+++..+... .|..+.+..+. -.....|.++++.+++...++
T Consensus 137 h~apVl~l~~~p~~~fLAvss~----dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~-- 210 (933)
T KOG1274|consen 137 HDAPVLQLSYDPKGNFLAVSSC----DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN-- 210 (933)
T ss_pred cCCceeeeeEcCCCCEEEEEec----CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC--
Confidence 444333 37788777766443 456888888765422 23334333321 122345677767777766554
Q ss_pred eEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+|+..+.+....+... ...++.+.++|.|..+. .++ .-..|..||.
T Consensus 211 -~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiA--As~--~~g~I~vWnv 261 (933)
T KOG1274|consen 211 -TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIA--AST--LDGQILVWNV 261 (933)
T ss_pred -eEEEEccCCceeheeecccccccceEEEEEcCCCcEEe--eec--cCCcEEEEec
Confidence 4778887666554444332 22256677888876555 222 2346667776
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0075 Score=64.49 Aligned_cols=227 Identities=12% Similarity=0.109 Sum_probs=120.6
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
-.+..++||++|+.+.=+. -...|.+||++||+.+.--..+....-+.+.||+.-+|++..-
T Consensus 259 k~Vrd~~~s~~g~~fLS~s-----fD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~s------------- 320 (503)
T KOG0282|consen 259 KPVRDASFNNCGTSFLSAS-----FDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGS------------- 320 (503)
T ss_pred hhhhhhhccccCCeeeeee-----cceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecC-------------
Confidence 3477889999999876432 2367999999999977543333334678899999777766621
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
..+|..+++.++. -+.-|.. +-.-...+.+-++|++.+-++.. ..+.+++.... .+...+..
T Consensus 321 --d~ki~~wDiRs~k--vvqeYd~--hLg~i~~i~F~~~g~rFissSDd----ks~riWe~~~~--------v~ik~i~~ 382 (503)
T KOG0282|consen 321 --DKKIRQWDIRSGK--VVQEYDR--HLGAILDITFVDEGRRFISSSDD----KSVRIWENRIP--------VPIKNIAD 382 (503)
T ss_pred --CCcEEEEeccchH--HHHHHHh--hhhheeeeEEccCCceEeeeccC----ccEEEEEcCCC--------ccchhhcc
Confidence 2367778876642 1111111 11123467778888887644322 35555555441 11111111
Q ss_pred CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCC----cEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 369 GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN----WKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 369 ~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~----~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
.....-+ ...|.++++.-.+..+ .++.+.+..+-+.+ .+-.... +..++--.+++ +..+++...+
T Consensus 383 ~~~hsmP~~~~~P~~~~~~aQs~dN----~i~ifs~~~~~r~nkkK~feGh~va--Gys~~v~fSpD-G~~l~SGdsd-- 453 (503)
T KOG0282|consen 383 PEMHTMPCLTLHPNGKWFAAQSMDN----YIAIFSTVPPFRLNKKKRFEGHSVA--GYSCQVDFSPD-GRTLCSGDSD-- 453 (503)
T ss_pred hhhccCcceecCCCCCeehhhccCc----eEEEEecccccccCHhhhhcceecc--CceeeEEEcCC-CCeEEeecCC--
Confidence 1111111 2445555544333221 23333322111101 1111111 23333335555 5666665555
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEE
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFY 480 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~ 480 (783)
..++.||..+-+.+..+....+.+.+..+.|-....+.
T Consensus 454 G~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skva 491 (503)
T KOG0282|consen 454 GKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVA 491 (503)
T ss_pred ccEEEeechhhhhhhccccCCcceEEEEecCCCcceeE
Confidence 47889998777776777766666667777766544443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0059 Score=67.02 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=88.3
Q ss_pred CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-cc
Q psy2521 179 QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KF 257 (783)
Q Consensus 179 ~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~ 257 (783)
..+-.||+... +|-+|....|...-..+.-.+..+.|.|=..-+.-+.+ -..+|.+||+.+++......+.. ..
T Consensus 649 dg~i~lWr~~a-~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~as----yd~Ti~lWDl~~~~~~~~l~gHtdqI 723 (1012)
T KOG1445|consen 649 DGQINLWRLTA-NGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVAS----YDSTIELWDLANAKLYSRLVGHTDQI 723 (1012)
T ss_pred CceEEEEEecc-CCCCcccCCcceeeecccceEEEEEecchhhhHhhhhh----ccceeeeeehhhhhhhheeccCcCce
Confidence 34566777765 44555556665443334455777888884433322222 22689999999987532211111 22
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC-eeEEEEEEecCCcEEEEEEe
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR-SLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~-~~~~~~~~SpDGk~l~~~~~ 336 (783)
-+++|||||+.++-+..|. +|++|+-... ...|++.+.-. .....+.|.=||++|++..-
T Consensus 724 f~~AWSpdGr~~AtVcKDg----------------~~rVy~Prs~---e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gf 784 (1012)
T KOG1445|consen 724 FGIAWSPDGRRIATVCKDG----------------TLRVYEPRSR---EQPVYEGKGPVGTRGARILWACDGRIVIVVGF 784 (1012)
T ss_pred eEEEECCCCcceeeeecCc----------------eEEEeCCCCC---CCccccCCCCccCcceeEEEEecCcEEEEecc
Confidence 4899999999998777442 4555553322 22455543211 12235678999999998765
Q ss_pred cCCCCcEEEEEECCC
Q psy2521 337 NNTQGSDLHYFDLHS 351 (783)
Q Consensus 337 ~~~~~~~l~~~dl~~ 351 (783)
...+..+|-++|..+
T Consensus 785 dk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 785 DKSSERQVQMYDAQT 799 (1012)
T ss_pred cccchhhhhhhhhhh
Confidence 544446677777655
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.96 E-value=1.6 Score=54.59 Aligned_cols=164 Identities=7% Similarity=0.039 Sum_probs=83.6
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-c----------c---cccCeeEEeeCCCEEEEEEeecC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-K----------N---VKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~----------~---~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
+++++++++..|.+ .+.+. .+|+++|..+........ + . ....++++.+++..||++..
T Consensus 571 ~gvavd~~~g~lyV-aDs~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt--- 643 (1057)
T PLN02919 571 GKLAIDLLNNRLFI-SDSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADT--- 643 (1057)
T ss_pred ceEEEECCCCeEEE-EECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeC---
Confidence 46889887665544 44322 578899986543211100 0 0 12357888888876665541
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEec------------------CCCCeeEEEEEEecCCcEEEEEEecCC
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF------------------PNGRSLGLHSEVTDCGRYLLVSTSNNT 339 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~------------------~~~~~~~~~~~~SpDGk~l~~~~~~~~ 339 (783)
..+.|.++++.+.. +..+.. -..| .++.++|++..|++...
T Consensus 644 ------------~n~~Ir~id~~~~~---V~tlag~G~~g~~~~gg~~~~~~~ln~P---~gVa~dp~~g~LyVad~--- 702 (1057)
T PLN02919 644 ------------ENHALREIDFVNET---VRTLAGNGTKGSDYQGGKKGTSQVLNSP---WDVCFEPVNEKVYIAMA--- 702 (1057)
T ss_pred ------------CCceEEEEecCCCE---EEEEeccCcccCCCCCChhhhHhhcCCC---eEEEEecCCCeEEEEEC---
Confidence 12345555543321 111100 0111 36788997777766532
Q ss_pred CCcEEEEEECCCCCCCcccCCCCceee------ecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 340 QGSDLHYFDLHSLPDGKISGKFPLKTV------IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 340 ~~~~l~~~dl~~g~~~~l~~~~~~~~l------~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
..+.|+++|..++....+......... ......-.. .++++|++||+... .+.+|.++|++++.
T Consensus 703 ~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 703 GQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---ESSSIRALDLKTGG 773 (1057)
T ss_pred CCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC---CCCeEEEEECCCCc
Confidence 336899998866311000000000000 000011111 48899998887543 34679999987644
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.17 Score=52.69 Aligned_cols=245 Identities=14% Similarity=0.128 Sum_probs=134.8
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc-cccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~-~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+-++..++++..|++||-..++ -.+.+||.++-. .+...+ .....+.+.+.|-|..|.-...
T Consensus 150 t~sv~di~~~a~Gk~l~tcSsD-----l~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~sr----------- 213 (406)
T KOG0295|consen 150 TDSVFDISFDASGKYLATCSSD-----LSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSR----------- 213 (406)
T ss_pred ccceeEEEEecCccEEEecCCc-----cchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeeccc-----------
Confidence 4568889999999988866532 337888876632 111111 2223468888899987765442
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC-ccc-CCCCc
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KIS-GKFPL 363 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~-~l~-~~~~~ 363 (783)
.+.+..+++.++- .++.-+..+.|...+..+-||.-++-- +....|.++-++++.+. .++ ...+.
T Consensus 214 -----D~tik~We~~tg~----cv~t~~~h~ewvr~v~v~~DGti~As~----s~dqtl~vW~~~t~~~k~~lR~hEh~v 280 (406)
T KOG0295|consen 214 -----DNTIKAWECDTGY----CVKTFPGHSEWVRMVRVNQDGTIIASC----SNDQTLRVWVVATKQCKAELREHEHPV 280 (406)
T ss_pred -----ccceeEEecccce----eEEeccCchHhEEEEEecCCeeEEEec----CCCceEEEEEeccchhhhhhhccccce
Confidence 3357777877653 345545556688888999999866522 22356666666653111 111 11111
Q ss_pred eeeecCccceeEEE-----EeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 364 KTVIPGMDHHHEII-----ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 364 ~~l~~~~~~~~~~~-----s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
..+.-.....++.+ +-+|..+.+...++ .-|-.+|+.++. -.-+|..+. ..+.++.+..+++.+++-.
T Consensus 281 Eci~wap~~~~~~i~~at~~~~~~~~l~s~SrD---ktIk~wdv~tg~--cL~tL~ghd--nwVr~~af~p~Gkyi~Sca 353 (406)
T KOG0295|consen 281 ECIAWAPESSYPSISEATGSTNGGQVLGSGSRD---KTIKIWDVSTGM--CLFTLVGHD--NWVRGVAFSPGGKYILSCA 353 (406)
T ss_pred EEEEecccccCcchhhccCCCCCccEEEeeccc---ceEEEEeccCCe--EEEEEeccc--ceeeeeEEcCCCeEEEEEe
Confidence 11111111112211 11233444444443 235667777664 244566555 3334444444466666776
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEE
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 492 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy 492 (783)
+|. .|.+||+.+++-...+..+.+-+..++...+. .++...|..++..++
T Consensus 354 DDk--tlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~--p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 354 DDK--TLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTA--PYVVTGSVDQTVKVW 403 (406)
T ss_pred cCC--cEEEEEeccceeeeccCCCcceeEEEecCCCC--ceEEeccccceeeee
Confidence 664 58889998777666666656666555543333 344455555555554
|
|
| >KOG2551|consensus | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0055 Score=59.75 Aligned_cols=112 Identities=18% Similarity=0.243 Sum_probs=74.3
Q ss_pred hHHH-HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC--CC------ceeEEEEcCCcchhhhcccccccccch
Q psy2521 615 CFDD-FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR--PE------LYGAALILVGALDMLRFNKFTIAYYSE 685 (783)
Q Consensus 615 ~~~D-~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~------lf~a~i~~~~~~d~~~~~~~~~~~~~~ 685 (783)
.++- +....+|++++|-.| ||+|+|.|+.|++.+++.. .. -|+-+|..+|+.-.-
T Consensus 87 ~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~------------ 150 (230)
T KOG2551|consen 87 GFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS------------ 150 (230)
T ss_pred ChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc------------
Confidence 3444 444566778889888 9999999999999998821 11 246666666654210
Q ss_pred hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 686 SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 686 ~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
.+.+.. ..+.+ +.+| .|-+.|+.|..|+...+..+++....+ ..+...
T Consensus 151 ----~~~~~~------------~~~~~---i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a------------~vl~Hp 198 (230)
T KOG2551|consen 151 ----KKLDES------------AYKRP---LSTP-SLHIFGETDTIVPSERSEQLAESFKDA------------TVLEHP 198 (230)
T ss_pred ----chhhhh------------hhccC---CCCC-eeEEecccceeecchHHHHHHHhcCCC------------eEEecC
Confidence 000100 11222 6777 999999999999999999998876543 344456
Q ss_pred CCccCCccc
Q psy2521 766 AGHGQGKAL 774 (783)
Q Consensus 766 ~gHg~~~~~ 774 (783)
+||.+.+..
T Consensus 199 ggH~VP~~~ 207 (230)
T KOG2551|consen 199 GGHIVPNKA 207 (230)
T ss_pred CCccCCCch
Confidence 799886433
|
|
| >PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0014 Score=70.09 Aligned_cols=113 Identities=16% Similarity=0.100 Sum_probs=64.1
Q ss_pred CCCccEEEEecCCCCCccCCcCcHH-HHHHHHc--CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSIS-RCMFLRH--FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 628 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~-~~~~l~~--~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~ 628 (783)
+.+.|++|++||-.+......|... ...++.. ..+.|+++|...+... .+..+... -...-.-+...+..|..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n--~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN--TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh--HHHHHHHHHHHHHHHHh
Confidence 5678999999998776633444444 3446665 5899999999753321 12222111 01111233344667775
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhcCCC--ceeEEEEcCC
Q psy2521 629 KKYTKPKYITIMGGSNGGLLVGACLNQRPE--LYGAALILVG 668 (783)
Q Consensus 629 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~--lf~a~i~~~~ 668 (783)
...+++++|-|+|||.||.+++.+...... ....+...-|
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 556889999999999999999999877655 4555555544
|
1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A .... |
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.24 Score=53.20 Aligned_cols=236 Identities=12% Similarity=0.089 Sum_probs=126.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
-.+..++|+-||..||+..- ...+++|+..++....+.....-..++.|..+|.+|+-...+
T Consensus 236 kdVT~L~Wn~~G~~LatG~~-----~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD------------- 297 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSE-----DGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVD------------- 297 (524)
T ss_pred CCcceEEecCCCCeEEEeec-----CcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCC-------------
Confidence 34778999999999998753 357899998776554433332223578999998888754422
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
..+.+++.-++... ..|+....+ ...+.|-.+.++.. . .....|+++.+.. +.|...+..
T Consensus 298 ---~ttilwd~~~g~~~--q~f~~~s~~--~lDVdW~~~~~F~t----s-~td~~i~V~kv~~--------~~P~~t~~G 357 (524)
T KOG0273|consen 298 ---GTTILWDAHTGTVK--QQFEFHSAP--ALDVDWQSNDEFAT----S-STDGCIHVCKVGE--------DRPVKTFIG 357 (524)
T ss_pred ---ccEEEEeccCceEE--EeeeeccCC--ccceEEecCceEee----c-CCCceEEEEEecC--------CCcceeeec
Confidence 23445565433222 233332222 13466766666542 1 1124577776654 223333333
Q ss_pred CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC--------CEEEEEEe
Q psy2521 369 GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN--------NKLIVHYI 438 (783)
Q Consensus 369 ~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g--------~~l~~~~~ 438 (783)
...... -|.|.|.-|.- ...+. .-+||...-.+. ...+-.+. .......|++.| +..++...
T Consensus 358 -H~g~V~alk~n~tg~LLaS-~SdD~-TlkiWs~~~~~~----~~~l~~Hs-kei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 358 -HHGEVNALKWNPTGSLLAS-CSDDG-TLKIWSMGQSNS----VHDLQAHS-KEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred -ccCceEEEEECCCCceEEE-ecCCC-eeEeeecCCCcc----hhhhhhhc-cceeeEeecCCCCccCCCcCCceEEEee
Confidence 343333 37777764443 33322 234554322211 11122221 122222222221 22333333
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+ +.|.+||..+|..+..+....-.|.+++.+|++..++ +-..-..+..++.
T Consensus 430 ~d--stV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylA----sGs~dg~V~iws~ 481 (524)
T KOG0273|consen 430 FD--STVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLA----SGSLDGCVHIWST 481 (524)
T ss_pred cC--CeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEE----ecCCCCeeEeccc
Confidence 33 4688999989988777765544466777788887665 2233457777777
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.08 Score=61.19 Aligned_cols=178 Identities=12% Similarity=0.050 Sum_probs=105.8
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEE
Q psy2521 184 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISW 262 (783)
Q Consensus 184 l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~W 262 (783)
+.+.+-..+++..+|+.=+ ..+...+++-||+++|.+. +...|.++++.++.... ..........+.+
T Consensus 78 v~~y~fps~~~~~iL~Rft------lp~r~~~v~g~g~~iaags-----dD~~vK~~~~~D~s~~~~lrgh~apVl~l~~ 146 (933)
T KOG1274|consen 78 VLRYKFPSGEEDTILARFT------LPIRDLAVSGSGKMIAAGS-----DDTAVKLLNLDDSSQEKVLRGHDAPVLQLSY 146 (933)
T ss_pred EEEeeCCCCCccceeeeee------ccceEEEEecCCcEEEeec-----CceeEEEEeccccchheeecccCCceeeeeE
Confidence 3333333556665665443 3477899999999999864 44789999887654322 1222223368899
Q ss_pred eeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCcee--EEec--CCCCeeEEEEEEecCCcEEEEEEecC
Q psy2521 263 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP--VVEF--PNGRSLGLHSEVTDCGRYLLVSTSNN 338 (783)
Q Consensus 263 spDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~--v~~~--~~~~~~~~~~~~SpDGk~l~~~~~~~ 338 (783)
.|.++.|+.+..+ .+|+++++.+..-...+ |... .........++|+|+|..+++...+
T Consensus 147 ~p~~~fLAvss~d----------------G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d- 209 (933)
T KOG1274|consen 147 DPKGNFLAVSSCD----------------GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD- 209 (933)
T ss_pred cCCCCEEEEEecC----------------ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC-
Confidence 9999988877743 26788887654221111 1110 0111234578999997777765433
Q ss_pred CCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 339 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHE--IIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 339 ~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
+.|-+++..+.+. ...+..... ..+. .|+|.|++|.-.+ -+++|..+|.++
T Consensus 210 ---~~Vkvy~r~~we~--------~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~----~~g~I~vWnv~t 263 (933)
T KOG1274|consen 210 ---NTVKVYSRKGWEL--------QFKLRDKLSSSKFSDLQWSPNGKYIAAST----LDGQILVWNVDT 263 (933)
T ss_pred ---CeEEEEccCCcee--------heeecccccccceEEEEEcCCCcEEeeec----cCCcEEEEeccc
Confidence 5777777766210 111222111 1132 5999999888543 345688899875
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.031 Score=55.60 Aligned_cols=123 Identities=14% Similarity=0.139 Sum_probs=80.4
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+-++-...++.|.++|.- |+...++.+||+++|+.+..-..+...-...|+++|..++++. +. .
T Consensus 52 tGavW~~Did~~s~~liT-----GSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~t--D~---------~ 115 (327)
T KOG0643|consen 52 TGAVWCCDIDWDSKHLIT-----GSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILAST--DK---------Q 115 (327)
T ss_pred CceEEEEEecCCcceeee-----ccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEe--hh---------h
Confidence 445666778888887763 4555889999999999875433333334788999999999887 21 1
Q ss_pred ccCCceEEEEEcCCCC----CCc-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 288 AHMGQKIYYHVLGTEQ----DKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~----~~d-~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
......|.+.++.... +++ .+....++. -...+.|+|-|++|+.- .+...|-.+|+.+|
T Consensus 116 mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~s--kit~a~Wg~l~~~ii~G----he~G~is~~da~~g 179 (327)
T KOG0643|consen 116 MGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDS--KITSALWGPLGETIIAG----HEDGSISIYDARTG 179 (327)
T ss_pred cCcceEEEEEEccCChhhhcccCceEEecCCcc--ceeeeeecccCCEEEEe----cCCCcEEEEEcccC
Confidence 3445566666665332 122 233333332 24578899999999743 23367888998875
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.1 Score=53.24 Aligned_cols=149 Identities=15% Similarity=0.138 Sum_probs=74.5
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKV 397 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L 397 (783)
...++|||||+|+...- +.++.+++.-=+..+.+.+....-.| .+...... .|+++..++.-++-. + ..+|
T Consensus 232 ~~aavSP~GRFia~~gF----TpDVkVwE~~f~kdG~fqev~rvf~L-kGH~saV~~~aFsn~S~r~vtvSkD-G-~wri 304 (420)
T KOG2096|consen 232 YDAAVSPDGRFIAVSGF----TPDVKVWEPIFTKDGTFQEVKRVFSL-KGHQSAVLAAAFSNSSTRAVTVSKD-G-KWRI 304 (420)
T ss_pred cceeeCCCCcEEEEecC----CCCceEEEEEeccCcchhhhhhhhee-ccchhheeeeeeCCCcceeEEEecC-C-cEEE
Confidence 46889999999986532 24555555311111122111111112 23333222 588887777654432 2 4567
Q ss_pred EEEcCCC---CCCCCcEEe-ecCC--CCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeee
Q psy2521 398 VTINLNN---PCEKNWKTL-IPED--ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHIS 470 (783)
Q Consensus 398 ~~~d~~~---~~~~~~~~l-i~~~--~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s 470 (783)
|-+|+.= .++...++- +|.. ....+.-...+.++.|.++.. +.|.++..++|+...++..- .+.|+.++
T Consensus 305 wdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g----s~l~~~~se~g~~~~~~e~~h~~~Is~is 380 (420)
T KOG2096|consen 305 WDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG----SDLKVFASEDGKDYPELEDIHSTTISSIS 380 (420)
T ss_pred eeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC----CceEEEEcccCccchhHHHhhcCceeeEE
Confidence 7666531 111111111 1110 112222223344445554432 45888888888865555432 67788888
Q ss_pred ccccccEEE
Q psy2521 471 GRRKYNEVF 479 (783)
Q Consensus 471 ~~~d~~~l~ 479 (783)
+++++..+.
T Consensus 381 ~~~~g~~~a 389 (420)
T KOG2096|consen 381 YSSDGKYIA 389 (420)
T ss_pred ecCCCcEEe
Confidence 888876554
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.29 Score=61.02 Aligned_cols=211 Identities=14% Similarity=0.114 Sum_probs=109.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-----------------ccccCeeEEeeCCCEEEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-----------------NVKFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-----------------~~~~~~~~WspDg~~l~y~~ 273 (783)
-.+++++++|..|. ..+..+ ..|+++|+.++........ -....+++++|++..+|.+.
T Consensus 626 P~GIavd~~gn~LY-VaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLLY-VADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEEE-EEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 35788999988754 444332 4689999887764321100 00124688999777777665
Q ss_pred eecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC-----------CC--eeEEEEEEecCCcEEEEEEecCCC
Q psy2521 274 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN-----------GR--SLGLHSEVTDCGRYLLVSTSNNTQ 340 (783)
Q Consensus 274 ~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~-----------~~--~~~~~~~~SpDGk~l~~~~~~~~~ 340 (783)
. ..++|+.++..+... .++.... .. ..-.+++++|||++|++... .
T Consensus 702 ~---------------~~~~I~v~d~~~g~v---~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs---~ 760 (1057)
T PLN02919 702 A---------------GQHQIWEYNISDGVT---RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS---E 760 (1057)
T ss_pred C---------------CCCeEEEEECCCCeE---EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC---C
Confidence 2 234577666543311 1111000 00 01136789999999876543 3
Q ss_pred CcEEEEEECCCCCCCcccCCCCc--eee--ec---C------ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 341 GSDLHYFDLHSLPDGKISGKFPL--KTV--IP---G------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 341 ~~~l~~~dl~~g~~~~l~~~~~~--~~l--~~---~------~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
.+.|+++|++++....+....+. ..+ +. + ...-.. .++++|+ +|+. + ..+.+|.++|.+++.
T Consensus 761 n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVA-D--s~N~rIrviD~~tg~ 836 (1057)
T PLN02919 761 SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVA-D--SYNHKIKKLDPATKR 836 (1057)
T ss_pred CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEE-E--CCCCEEEEEECCCCe
Confidence 37899999876321000000000 000 00 0 000011 4777775 6553 3 246779999987654
Q ss_pred CCCcEEeecCCC------------CceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 407 EKNWKTLIPEDE------------NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 407 ~~~~~~li~~~~------------~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
...+...+. -....++.+..++.+++....+ ..|.++|+.+++.
T Consensus 837 ---v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~N--n~Irvid~~~~~~ 892 (1057)
T PLN02919 837 ---VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNN--SLIRYLDLNKGEA 892 (1057)
T ss_pred ---EEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCC--CEEEEEECCCCcc
Confidence 333332110 0112234444446677665443 5789999976654
|
|
| >PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.05 Score=58.60 Aligned_cols=215 Identities=14% Similarity=0.132 Sum_probs=123.2
Q ss_pred EEEEEEecCcCCCCCccEEEEecCCCCC---ccCCcCcHHHHHHHH-cCCEEEEEe-cCCC-------CCC-C------C
Q psy2521 540 PMYIIHRVGALRNRRNPVIIYGYGGYGV---SVLPTFSISRCMFLR-HFNGIYAIP-NIRG-------GGE-L------G 600 (783)
Q Consensus 540 ~~~~~~p~~~~~~~~~P~ll~~hGg~~~---~~~~~~~~~~~~~l~-~~G~~v~~~-~~RG-------~g~-~------G 600 (783)
.+.|+.|++ .......+|++-||.+. ...+.+....+..++ .-|-+++.. ++.. -+. . +
T Consensus 51 ~l~I~vP~~--~~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIA 128 (367)
T PF10142_consen 51 WLTIYVPKN--DKNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIA 128 (367)
T ss_pred EEEEEECCC--CCCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHH
Confidence 355677876 23566789999998622 222333444444444 335444433 3222 111 1 0
Q ss_pred hhHHhhcc---ccCCc------ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC-Ccc
Q psy2521 601 EDWHNAGR---LLKKQ------NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV-GAL 670 (783)
Q Consensus 601 ~~~~~~g~---~~~~~------~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~-~~~ 670 (783)
..|+..-. ..+-. ....-+.++-+++.++...+.++-.|.|.|==|..+..++.-. .+.+|+++.+ +++
T Consensus 129 ytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa~D-~RV~aivP~Vid~L 207 (367)
T PF10142_consen 129 YTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAAVD-PRVKAIVPIVIDVL 207 (367)
T ss_pred HHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhccC-cceeEEeeEEEccC
Confidence 13444221 11100 0122222233344444556788999999999999988777754 4556665542 344
Q ss_pred hhhhccc--c-cccccch---hhh---CCC---CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 671 DMLRFNK--F-TIAYYSE---SEF---GSP---NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 671 d~~~~~~--~-~~~~~~~---~~~---g~p---~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
+|..... + ..|..|- ..| |-. ..++..+.+.-.+||...++ ...| -||+.|.+|+.-.|..+.
T Consensus 208 N~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~r----L~~P-K~ii~atgDeFf~pD~~~ 282 (367)
T PF10142_consen 208 NMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDR----LTMP-KYIINATGDEFFVPDSSN 282 (367)
T ss_pred CcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHh----cCcc-EEEEecCCCceeccCchH
Confidence 4433211 0 1111121 111 211 23444455666789987766 5777 999999999999999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
-++..|.. +..+++.|+++|+...
T Consensus 283 ~y~d~L~G----------~K~lr~vPN~~H~~~~ 306 (367)
T PF10142_consen 283 FYYDKLPG----------EKYLRYVPNAGHSLIG 306 (367)
T ss_pred HHHhhCCC----------CeeEEeCCCCCcccch
Confidence 99998863 4578999999999865
|
Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=1 Score=55.05 Aligned_cols=196 Identities=13% Similarity=0.131 Sum_probs=99.0
Q ss_pred EeeEEECCC-CcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEee-CCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPD-G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+..+.|+|. +++||-+ +. ..+|++||+.+++.+.... .......++|+| |+..|+-...
T Consensus 535 v~~l~~~~~~~~~las~-~~----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~------------- 596 (793)
T PLN00181 535 LSGICWNSYIKSQVASS-NF----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSD------------- 596 (793)
T ss_pred eeeEEeccCCCCEEEEE-eC----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC-------------
Confidence 456778774 5665533 22 2579999999887554221 122235789997 5554443331
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE-ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV-TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~-SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
...|.+|++.+.. ....+.... ....+.| +++|++|+.... ...|+++|+..+. .+...+
T Consensus 597 ---Dg~v~iWd~~~~~--~~~~~~~~~---~v~~v~~~~~~g~~latgs~----dg~I~iwD~~~~~-------~~~~~~ 657 (793)
T PLN00181 597 ---DGSVKLWSINQGV--SIGTIKTKA---NICCVQFPSESGRSLAFGSA----DHKVYYYDLRNPK-------LPLCTM 657 (793)
T ss_pred ---CCEEEEEECCCCc--EEEEEecCC---CeEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCC-------ccceEe
Confidence 2368888886543 222222211 2345666 457888775432 3689999997621 111112
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCC----CCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPC----EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~----~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+...... .|. ++..|+..+. ...|..+|+..+. ......+..+. ..+..+.+...+.++++...+
T Consensus 658 -~~h~~~V~~v~f~-~~~~lvs~s~----D~~ikiWd~~~~~~~~~~~~l~~~~gh~--~~i~~v~~s~~~~~lasgs~D 729 (793)
T PLN00181 658 -IGHSKTVSYVRFV-DSSTLVSSST----DNTLKLWDLSMSISGINETPLHSFMGHT--NVKNFVGLSVSDGYIATGSET 729 (793)
T ss_pred -cCCCCCEEEEEEe-CCCEEEEEEC----CCEEEEEeCCCCccccCCcceEEEcCCC--CCeeEEEEcCCCCEEEEEeCC
Confidence 22222222 354 5665554332 2346666765321 01122222222 222233333224556666666
Q ss_pred CeeEEEEEECCCC
Q psy2521 441 VRSVMDLHDLNTG 453 (783)
Q Consensus 441 g~~~l~~~dl~~G 453 (783)
+ .|.+|+...+
T Consensus 730 ~--~v~iw~~~~~ 740 (793)
T PLN00181 730 N--EVFVYHKAFP 740 (793)
T ss_pred C--EEEEEECCCC
Confidence 4 5777776433
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.27 Score=48.28 Aligned_cols=222 Identities=10% Similarity=0.092 Sum_probs=120.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+-..+.|-|...+|- .|. ...+++||++||++...- -.......+.|. +...++++..
T Consensus 60 ~EVlD~~~s~Dnskf~s----~Gg-Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fN-eesSVv~Sgs------------- 120 (307)
T KOG0316|consen 60 HEVLDAALSSDNSKFAS----CGG-DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFN-EESSVVASGS------------- 120 (307)
T ss_pred ceeeecccccccccccc----CCC-CceEEEEEcccCeeeeecccccceeeEEEec-CcceEEEecc-------------
Confidence 34556777888887762 233 368999999999976532 222233567885 4455665542
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....+..|+-.+...+.+.++.+..+. ..++.++ + +.++..+ ....+..+|+..|. +.
T Consensus 121 --fD~s~r~wDCRS~s~ePiQildea~D~--V~Si~v~--~-heIvaGS---~DGtvRtydiR~G~------------l~ 178 (307)
T KOG0316|consen 121 --FDSSVRLWDCRSRSFEPIQILDEAKDG--VSSIDVA--E-HEIVAGS---VDGTVRTYDIRKGT------------LS 178 (307)
T ss_pred --ccceeEEEEcccCCCCccchhhhhcCc--eeEEEec--c-cEEEeec---cCCcEEEEEeecce------------ee
Confidence 233677778777766777777654432 2344432 2 2232221 22456677776641 12
Q ss_pred cCc-ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 368 PGM-DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 368 ~~~-~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
.+. .... . .+++||+-.+..+ . +..|-.+|-++++. .+.-.-+.....--...+...+..++...+|| .
T Consensus 179 sDy~g~pit~vs~s~d~nc~La~~-l---~stlrLlDk~tGkl--L~sYkGhkn~eykldc~l~qsdthV~sgSEDG--~ 250 (307)
T KOG0316|consen 179 SDYFGHPITSVSFSKDGNCSLASS-L---DSTLRLLDKETGKL--LKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDG--K 250 (307)
T ss_pred hhhcCCcceeEEecCCCCEEEEee-c---cceeeecccchhHH--HHHhcccccceeeeeeeecccceeEEeccCCc--e
Confidence 211 1111 1 4889988666533 2 34466777666541 11111111111111223333356778888886 7
Q ss_pred EEEEECCCCceeeeecCCCeE-EEeeeccccccEEE
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQ-ITHISGRRKYNEVF 479 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~-v~~~s~~~d~~~l~ 479 (783)
++.|||.+++.+..+..+... +..++..|.-..++
T Consensus 251 Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~ 286 (307)
T KOG0316|consen 251 VYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFI 286 (307)
T ss_pred EEEEEeccceeeeeeccCCceeEEeeecccCcccee
Confidence 999999888776666555333 45555555544443
|
|
| >TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.061 Score=63.17 Aligned_cols=82 Identities=13% Similarity=0.256 Sum_probs=50.9
Q ss_pred EEEEEeCCCCCeEEE-eCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC-CceEEEEEEECCCCc--cccccccccccC
Q psy2521 183 ILYVQRNLTGSTEVF-LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG-SDWNTLHIKDVDTGK--DYPEVLKNVKFP 258 (783)
Q Consensus 183 ~l~~~~~~~g~~~~l-lD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G-~d~~~i~v~Dl~tg~--~~~~~~~~~~~~ 258 (783)
.|.+.+..+...+++ +.-+ ..+-.+.|||||++|||+++..| +....||+.||.+.. .+.+..+.+ .
T Consensus 330 ~L~~~D~dG~n~~~ve~~~~-------~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~a--a 400 (912)
T TIGR02171 330 NLAYIDYTKGASRAVEIEDT-------ISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENA--A 400 (912)
T ss_pred eEEEEecCCCCceEEEecCC-------CceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccc--c
Confidence 566666545555655 4422 33677999999999999555544 123679999997643 334444544 3
Q ss_pred eeEE--eeCCC-EEEEEE
Q psy2521 259 SISW--THDHK-GFFYNQ 273 (783)
Q Consensus 259 ~~~W--spDg~-~l~y~~ 273 (783)
-+.| ..+|+ .|+|++
T Consensus 401 iprwrv~e~gdt~ivyv~ 418 (912)
T TIGR02171 401 IPRWRVLENGDTVIVYVS 418 (912)
T ss_pred ccceEecCCCCeEEEEEc
Confidence 4556 45554 466766
|
This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown. |
| >TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.051 Score=59.46 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=55.8
Q ss_pred HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 575 ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 575 ~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
.+....|.. |+-|.+.|.+--+.- ....+.-.++|.+..+...++. +.++ +-++|.|+||.++++++.
T Consensus 120 RS~V~~Ll~-g~dVYl~DW~~p~~v--------p~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~A 187 (406)
T TIGR01849 120 RSTVEALLP-DHDVYITDWVNARMV--------PLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVA 187 (406)
T ss_pred HHHHHHHhC-CCcEEEEeCCCCCCC--------chhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHH
Confidence 344556666 999999997642210 0122334577877654444432 3455 999999999999876655
Q ss_pred cC-----CCceeEEEEcCCcchhh
Q psy2521 655 QR-----PELYGAALILVGALDML 673 (783)
Q Consensus 655 ~~-----p~lf~a~i~~~~~~d~~ 673 (783)
.. |+..+.++...+.+|..
T Consensus 188 l~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 188 LMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HHHhcCCCCCcceEEEEecCccCC
Confidence 43 55678888877777653
|
This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some |
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.061 Score=58.87 Aligned_cols=144 Identities=16% Similarity=0.214 Sum_probs=89.2
Q ss_pred EEECCCCcEEEEEEec----CCCc---eEEEEEEECCCCcc-ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 214 YAFSDNGKHFAYCLSK----SGSD---WNTLHIKDVDTGKD-YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~----~G~d---~~~i~v~Dl~tg~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+.|.+-|.-|....+. +|.- ..+||++++++-.. +++...+ -...+.|+|+|+.|..+--.
T Consensus 223 m~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~G-PVhdv~W~~s~~EF~VvyGf---------- 291 (566)
T KOG2315|consen 223 MKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEG-PVHDVTWSPSGREFAVVYGF---------- 291 (566)
T ss_pred EEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCC-CceEEEECCCCCEEEEEEec----------
Confidence 6677778877665432 2211 25899999984332 2333222 23689999999998877622
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
-|.++-++++... .|++.+.++. ..+.|+|-|++|++..- ++-..++-++|+.+. ..+ .
T Consensus 292 ----MPAkvtifnlr~~-----~v~df~egpR--N~~~fnp~g~ii~lAGF-GNL~G~mEvwDv~n~--K~i-------~ 350 (566)
T KOG2315|consen 292 ----MPAKVTIFNLRGK-----PVFDFPEGPR--NTAFFNPHGNIILLAGF-GNLPGDMEVWDVPNR--KLI-------A 350 (566)
T ss_pred ----ccceEEEEcCCCC-----EeEeCCCCCc--cceEECCCCCEEEEeec-CCCCCceEEEeccch--hhc-------c
Confidence 2446777777543 5777766663 35789999999987643 233477888888761 111 0
Q ss_pred eecCccceeEEEEeeCCEEEEEEC
Q psy2521 366 VIPGMDHHHEIIANNGPELIVKTT 389 (783)
Q Consensus 366 l~~~~~~~~~~~s~dg~~l~~~t~ 389 (783)
-+...+..+.-|+|||.+|+-.|.
T Consensus 351 ~~~a~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 351 KFKAANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred ccccCCceEEEEcCCCcEEEEEec
Confidence 011122334459999998876554
|
|
| >PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0094 Score=62.05 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=71.2
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHH---cCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH----HHHHH
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLR---HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA----AEYMI 627 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~---~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~----~~~l~ 627 (783)
.++|+++-|.||... |...++..|. ...+.|++..+.|....... .......+.-+++|.++- ++.++
T Consensus 2 ~~li~~IPGNPGlv~---fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~--~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE---FYEEFLSALYEKLNPQFEILGISHAGHSTSPSN--SKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHH---HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc--ccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 478999999988753 3334434443 23799999999995543322 000012344556666653 33333
Q ss_pred HcCCCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEEcCCcc
Q psy2521 628 NKKYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGAL 670 (783)
Q Consensus 628 ~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~~~~~~ 670 (783)
.+......++.++|||.|+|+++.++.+.+ .....++...|.+
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 322114569999999999999999999999 4566777777743
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.13 Score=54.52 Aligned_cols=156 Identities=12% Similarity=-0.019 Sum_probs=78.0
Q ss_pred EEEeeEEECCCCcEEEEEEe-----cC-CCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLS-----KS-GSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~-----~~-G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
.......+.|||+..+=... .. ......||.+|..++.... ... -....+++||||++.+|++-..
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l-~~~~~~~~NGla~SpDg~tly~aDT~------ 183 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRL-LDDDLTIPNGLAFSPDGKTLYVADTP------ 183 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEe-ecCcEEecCceEECCCCCEEEEEeCC------
Confidence 34567889999985432222 11 1223468888875443322 222 1122589999999988887632
Q ss_pred CCCcccccCCceEEEEEcCC---CCCCce-eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 282 DGTETTAHMGQKIYYHVLGT---EQDKDI-PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt---~~~~d~-~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
..+|++..+.. ...... .++.. .++..--+.....||..-+.. . .....|.+++.++ ..
T Consensus 184 ---------~~~i~r~~~d~~~g~~~~~~~~~~~~-~~~G~PDG~~vDadG~lw~~a--~-~~g~~v~~~~pdG-~l--- 246 (307)
T COG3386 184 ---------ANRIHRYDLDPATGPIGGRRGFVDFD-EEPGLPDGMAVDADGNLWVAA--V-WGGGRVVRFNPDG-KL--- 246 (307)
T ss_pred ---------CCeEEEEecCcccCccCCcceEEEcc-CCCCCCCceEEeCCCCEEEec--c-cCCceEEEECCCC-cE---
Confidence 34677776652 111111 12211 111222345666666644311 1 2224677777664 11
Q ss_pred cCCCCceeeecCccceeEEEEeeCCEEEEEECCC
Q psy2521 358 SGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN 391 (783)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~ 391 (783)
.....+-........+-.++.+.||+++++.
T Consensus 247 ---~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~ 277 (307)
T COG3386 247 ---LGEIKLPVKRPTNPAFGGPDLNTLYITSARS 277 (307)
T ss_pred ---EEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence 0001011011122224567789999988765
|
|
| >PLN02733 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0027 Score=70.36 Aligned_cols=87 Identities=17% Similarity=0.264 Sum_probs=60.1
Q ss_pred cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH
Q psy2521 572 TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA 651 (783)
Q Consensus 572 ~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~ 651 (783)
.|... ...|++.||.. ..|++| +|-+|+... .....++++.+.++.+.+.. ...++.|+||||||+++..
T Consensus 109 ~~~~l-i~~L~~~GY~~-~~dL~g---~gYDwR~~~---~~~~~~~~Lk~lIe~~~~~~--g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 109 YFHDM-IEQLIKWGYKE-GKTLFG---FGYDFRQSN---RLPETMDGLKKKLETVYKAS--GGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHH-HHHHHHcCCcc-CCCccc---CCCCccccc---cHHHHHHHHHHHHHHHHHHc--CCCCEEEEEECHhHHHHHH
Confidence 34443 45566789877 679999 777787632 12234677777777766542 2358999999999999999
Q ss_pred HHhcCCCce----eEEEEcCC
Q psy2521 652 CLNQRPELY----GAALILVG 668 (783)
Q Consensus 652 ~~~~~p~lf----~a~i~~~~ 668 (783)
.+.++|+.+ +..|+.++
T Consensus 179 fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HHHHCCHhHHhHhccEEEECC
Confidence 998888743 55555544
|
|
| >PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0026 Score=52.55 Aligned_cols=77 Identities=18% Similarity=0.158 Sum_probs=50.7
Q ss_pred CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcCh
Q psy2521 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 536 g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~ 615 (783)
|.++......|++ .+..+|+++||-...+. .|. .+...|+++||.|+..|+||.|... |.. ...+.
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~--ry~-~~a~~L~~~G~~V~~~D~rGhG~S~------g~r-g~~~~ 66 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSG--RYA-HLAEFLAEQGYAVFAYDHRGHGRSE------GKR-GHIDS 66 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHH--HHH-HHHHHHHhCCCEEEEECCCcCCCCC------Ccc-cccCC
Confidence 5677777777764 26889999999754443 233 3456777789999999999976543 111 12345
Q ss_pred HHHHHHHHHHH
Q psy2521 616 FDDFQAAAEYM 626 (783)
Q Consensus 616 ~~D~~a~~~~l 626 (783)
|+|++.-++.+
T Consensus 67 ~~~~v~D~~~~ 77 (79)
T PF12146_consen 67 FDDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHHH
Confidence 66666555443
|
Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins. |
| >COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.015 Score=62.17 Aligned_cols=90 Identities=17% Similarity=0.126 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 575 ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 575 ~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
.+...|+.++|.-|.+++.|+-.. +.+ ...+.....+++..|++.+++. +-.++|-+.|+|.||.+...++.
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~-~~~-----~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDA-SLA-----AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchH-hhh-----hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHHHHHHH
Confidence 345577878899999999887321 111 1122222335556777777765 44568999999999999999988
Q ss_pred cCCCc-eeEEEEcCCcchh
Q psy2521 655 QRPEL-YGAALILVGALDM 672 (783)
Q Consensus 655 ~~p~l-f~a~i~~~~~~d~ 672 (783)
.++.. .+.+....-.+|.
T Consensus 201 ~~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred hhhhcccccceeeecchhh
Confidence 88776 5555555444443
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.24 Score=56.37 Aligned_cols=153 Identities=16% Similarity=0.195 Sum_probs=83.7
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
+=++|||+.+--. ......+.++|.++.++.....-+.+.....++|||+++|.+.++... ...
T Consensus 198 ~PlpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~------------G~t 261 (635)
T PRK02888 198 IPLPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEE------------GVT 261 (635)
T ss_pred cccCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCccc------------Ccc
Confidence 3478999976321 234467889999987654322222244578999999999988764321 112
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C-cc
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G-MD 371 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~-~~ 371 (783)
+..++.++ .....+|.... .-.+.+|||+..+. .+.+-++|..+... ........+. + ..
T Consensus 262 l~em~a~e--~d~~vvfni~~------iea~vkdGK~~~V~------gn~V~VID~~t~~~----~~~~v~~yIPVGKsP 323 (635)
T PRK02888 262 LAEMMAAE--RDWVVVFNIAR------IEEAVKAGKFKTIG------GSKVPVVDGRKAAN----AGSALTRYVPVPKNP 323 (635)
T ss_pred eeeecccc--CceEEEEchHH------HHHhhhCCCEEEEC------CCEEEEEECCcccc----CCcceEEEEECCCCc
Confidence 33333221 11223332211 12457899987751 26888999876100 0111222221 2 12
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
.+. .+||||+++|. ++...+ .+-.+|++.
T Consensus 324 HGV-~vSPDGkylyV-anklS~--tVSVIDv~k 352 (635)
T PRK02888 324 HGV-NTSPDGKYFIA-NGKLSP--TVTVIDVRK 352 (635)
T ss_pred cce-EECCCCCEEEE-eCCCCC--cEEEEEChh
Confidence 222 49999998886 554333 366667654
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.41 Score=51.04 Aligned_cols=235 Identities=15% Similarity=0.178 Sum_probs=127.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..+.++|....++ .|.+.....++|-.+++.+..-.+.. +...+.++||.+.++-.+.
T Consensus 222 i~ald~~~s~~~il-----TGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa--------------- 281 (506)
T KOG0289|consen 222 ITALDIIPSSSKIL-----TGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA--------------- 281 (506)
T ss_pred eeEEeecCCCCcce-----ecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC---------------
Confidence 33445555533332 23334567889988887665322222 2345667777765543331
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+++|..+..+.. .+...-+.+ .......|.|.|++..++++ .+-.-|..+|. . .......
T Consensus 282 -d~~i~vws~~~~s~~--~~~~~h~~~--V~~ls~h~tgeYllsAs~d~----~w~Fsd~~~g~--~------lt~vs~~ 344 (506)
T KOG0289|consen 282 -DEIIRVWSVPLSSEP--TSSRPHEEP--VTGLSLHPTGEYLLSASNDG----TWAFSDISSGS--Q------LTVVSDE 344 (506)
T ss_pred -cceEEeeccccccCc--ccccccccc--ceeeeeccCCcEEEEecCCc----eEEEEEccCCc--E------EEEEeec
Confidence 224666776655422 122211222 24567788899988655442 33344555531 1 1111111
Q ss_pred -ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 370 -MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 370 -~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
.+.++. .|.||| ++|.+. .+++.|-.+|+..+. +. .-+|.. ...+..+.+.++++.++...+++. |.
T Consensus 345 ~s~v~~ts~~fHpDg--Lifgtg--t~d~~vkiwdlks~~--~~-a~Fpgh-t~~vk~i~FsENGY~Lat~add~~--V~ 414 (506)
T KOG0289|consen 345 TSDVEYTSAAFHPDG--LIFGTG--TPDGVVKIWDLKSQT--NV-AKFPGH-TGPVKAISFSENGYWLATAADDGS--VK 414 (506)
T ss_pred cccceeEEeeEcCCc--eEEecc--CCCceEEEEEcCCcc--cc-ccCCCC-CCceeEEEeccCceEEEEEecCCe--EE
Confidence 122232 588887 444432 355667778887654 12 223332 455667777776777777777764 99
Q ss_pred EEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|||+.-+....++++ ...+..++.+..+..+.+.-+ --+||.++-
T Consensus 415 lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~----~l~Vy~~~k 461 (506)
T KOG0289|consen 415 LWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS----DLQVYICKK 461 (506)
T ss_pred EEEehhhcccceeeccccccceeEEEcCCCCeEEeecc----eeEEEEEec
Confidence 9999644445667766 223446666666666655422 236787775
|
|
| >PTZ00472 serine carboxypeptidase (CBP1); Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.011 Score=66.43 Aligned_cols=131 Identities=13% Similarity=0.125 Sum_probs=77.6
Q ss_pred CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc----------------HHHHHHHHcCCEEEEEecC-CCCCC
Q psy2521 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS----------------ISRCMFLRHFNGIYAIPNI-RGGGE 598 (783)
Q Consensus 536 g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~----------------~~~~~~l~~~G~~v~~~~~-RG~g~ 598 (783)
+..+..+++..++ .....|+||+++||||.+...++. ..-..|... ..++.+|. +|.|
T Consensus 60 ~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~--~~~l~iDqP~G~G- 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE--AYVIYVDQPAGVG- 134 (462)
T ss_pred CceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc--cCeEEEeCCCCcC-
Confidence 4567777776553 245689999999999887433210 011134432 45666675 5633
Q ss_pred CChhHHhhcc-ccCCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcC----C------CceeEEEEc
Q psy2521 599 LGEDWHNAGR-LLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQR----P------ELYGAALIL 666 (783)
Q Consensus 599 ~G~~~~~~g~-~~~~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~----p------~lf~a~i~~ 666 (783)
|... .... ........+|+...++.+.++ ......++.|.|+||||..+..++.+- . =-+++++..
T Consensus 135 ~S~~--~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IG 212 (462)
T PTZ00472 135 FSYA--DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVG 212 (462)
T ss_pred cccC--CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEe
Confidence 3321 1111 111233456777776655443 223447899999999999886665431 0 136899999
Q ss_pred CCcchhh
Q psy2521 667 VGALDML 673 (783)
Q Consensus 667 ~~~~d~~ 673 (783)
.|++|..
T Consensus 213 Ng~~dp~ 219 (462)
T PTZ00472 213 NGLTDPY 219 (462)
T ss_pred ccccChh
Confidence 9988764
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.024 Score=63.33 Aligned_cols=124 Identities=6% Similarity=0.052 Sum_probs=75.7
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+.+...+.||+|+.||=+....-.+...|++|++++=.... +.......+.++|||||++|+-.+.|.
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDR---------- 594 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDR---------- 594 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCc----------
Confidence 578999999999999998877666677889999987643332 222222346899999999998776332
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.+-++..........-.-....+...+....|+||+++++ +.++. ..+-++....
T Consensus 595 ------t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~Fa-TaSRD---K~VkVW~~~~ 649 (764)
T KOG1063|consen 595 ------TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFA-TASRD---KKVKVWEEPD 649 (764)
T ss_pred ------eEEeeeeecccchhhhhccccccceEEEEcccCcccceeE-EecCC---ceEEEEeccC
Confidence 2333333222111000001223344566889999999943 44432 3455554443
|
|
| >PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.02 Score=57.87 Aligned_cols=102 Identities=13% Similarity=0.173 Sum_probs=55.3
Q ss_pred ccEEEEecCCCCCccCC-cCcHHHH--HHHH--cCCEEEEEecCCCC--CCCChhHHhhccccCCcChHHHHHHHHHHHH
Q psy2521 555 NPVIIYGYGGYGVSVLP-TFSISRC--MFLR--HFNGIYAIPNIRGG--GELGEDWHNAGRLLKKQNCFDDFQAAAEYMI 627 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~-~~~~~~~--~~l~--~~G~~v~~~~~RG~--g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~ 627 (783)
...|||+||..|..... ++..... .+.. ...+.++..|+..- .-.|....+ .-+-+..+++.+.
T Consensus 4 g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~---------q~~~~~~~i~~i~ 74 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQR---------QAEFLAEAIKYIL 74 (225)
T ss_pred CCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHH---------HHHHHHHHHHHHH
Confidence 35789999965543211 1111110 0111 12577888887651 112211111 1123344556655
Q ss_pred Hc---CCCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEE
Q psy2521 628 NK---KYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALI 665 (783)
Q Consensus 628 ~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~ 665 (783)
+. ....+.+|.++||||||+++-.++...+ +..+.+|.
T Consensus 75 ~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 75 ELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred HhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 43 2467889999999999999888876543 24455544
|
This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane |
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.36 Score=51.76 Aligned_cols=238 Identities=12% Similarity=0.119 Sum_probs=110.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+-.+++||||++||++ |. ...|.|||.+|.+.+..... .....+++|--.-..+|-.+.+
T Consensus 204 eil~~avS~Dgkylatg----g~-d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D------------- 265 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATG----GR-DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD------------- 265 (479)
T ss_pred eeEEEEEcCCCcEEEec----CC-CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC-------------
Confidence 35568999999999975 22 26788999999987764222 2233567774333444444422
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
..+..|.+..-. --..+|+.++. ..++....-+|-+ +..... ..+.++++.. + .+.+..
T Consensus 266 ---rsvkvw~~~~~s-~vetlyGHqd~---v~~IdaL~reR~v--tVGgrD--rT~rlwKi~e-e---------sqlifr 324 (479)
T KOG0299|consen 266 ---RSVKVWSIDQLS-YVETLYGHQDG---VLGIDALSRERCV--TVGGRD--RTVRLWKIPE-E---------SQLIFR 324 (479)
T ss_pred ---CceEEEehhHhH-HHHHHhCCccc---eeeechhcccceE--Eecccc--ceeEEEeccc-c---------ceeeee
Confidence 234444543221 11123333221 2233333333322 332212 2333444432 0 111222
Q ss_pred CccceeEEE-EeeCCEEEEEECCCCCCceEEEEcCCCCCCC----CcEEeecCC----CCceEEEEEEeeCCEEEEEEec
Q psy2521 369 GMDHHHEII-ANNGPELIVKTTKNAPKGKVVTINLNNPCEK----NWKTLIPED----ENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 369 ~~~~~~~~~-s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~----~~~~li~~~----~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
+.......+ --+..+|+. +..++.|+.+++....+- ...-+.+.. ....+.++....+.-|+.+..-
T Consensus 325 g~~~sidcv~~In~~Hfvs----GSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~ 400 (479)
T KOG0299|consen 325 GGEGSIDCVAFINDEHFVS----GSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSW 400 (479)
T ss_pred CCCCCeeeEEEecccceee----ccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCC
Confidence 222222211 112233332 233456777766543211 011112221 0113445555555678877777
Q ss_pred CCeeEEEEEECCCCc-eeeee-cCC-CeEEEeeeccccccEEEEEEecCCCCceEE
Q psy2521 440 NVRSVMDLHDLNTGK-RLHSF-PLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIY 492 (783)
Q Consensus 440 ~g~~~l~~~dl~~G~-~~~~l-~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy 492 (783)
+|.-+||.. .+|- .++.| .++ .|.|.++.++.++..++....--.+-+++.
T Consensus 401 ~G~vrLW~i--~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 401 SGCVRLWKI--EDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred CCceEEEEe--cCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceee
Confidence 776555554 3452 22222 123 577888887788876665543333334433
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0072 Score=65.39 Aligned_cols=59 Identities=25% Similarity=0.291 Sum_probs=43.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccccc---CeeEEeeCCCEEEEEEee
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF---PSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~---~~~~WspDg~~l~y~~~~ 275 (783)
++..++|||||++||.+..+ ..|+|+|..+.+.+-... ..| --++||||||.|+-.-.|
T Consensus 292 ~in~f~FS~DG~~LA~VSqD-----GfLRvF~fdt~eLlg~mk--SYFGGLLCvcWSPDGKyIvtGGED 353 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQD-----GFLRIFDFDTQELLGVMK--SYFGGLLCVCWSPDGKYIVTGGED 353 (636)
T ss_pred cccceeEcCCCceEEEEecC-----ceEEEeeccHHHHHHHHH--hhccceEEEEEcCCccEEEecCCc
Confidence 57789999999999987643 469999998876553221 112 357999999988766533
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.04 Score=55.94 Aligned_cols=194 Identities=10% Similarity=0.084 Sum_probs=111.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccc-cCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVK-FPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~-~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+...+||.|+..|.-+ +-..++++--+.+|+.+.+-.+... .....|++||..|.-.+.|.
T Consensus 308 Gvt~l~FSrD~SqiLS~-----sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg------------ 370 (508)
T KOG0275|consen 308 GVTCLSFSRDNSQILSA-----SFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG------------ 370 (508)
T ss_pred CeeEEEEccCcchhhcc-----cccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc------------
Confidence 46678899999987632 3347899999999998876544332 24678999999998666332
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
.|.+|...+.. =...|..+....-..++..-|..---++..++ .+.+|++++.+. -.+....
T Consensus 371 ----tvkvW~~Ktte--C~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr---sntv~imn~qGQ---------vVrsfsS 432 (508)
T KOG0275|consen 371 ----TVKVWHGKTTE--CLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR---SNTVYIMNMQGQ---------VVRSFSS 432 (508)
T ss_pred ----cEEEecCcchh--hhhhccCCCCcccceeEEEcCCCCceEEEEcC---CCeEEEEeccce---------EEeeecc
Confidence 34445544321 11122211111111233333433222233333 378999999872 0222223
Q ss_pred Ccc-c-ee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 369 GMD-H-HH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 369 ~~~-~-~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
+.. + ++ . ..||.|+++|.... .+.+|-+...+++ .+..++-.+..++.-..-+. ..++.+|.+||.-+
T Consensus 433 GkREgGdFi~~~lSpkGewiYcigE----D~vlYCF~~~sG~---LE~tl~VhEkdvIGl~HHPH-qNllAsYsEDgllK 504 (508)
T KOG0275|consen 433 GKREGGDFINAILSPKGEWIYCIGE----DGVLYCFSVLSGK---LERTLPVHEKDVIGLTHHPH-QNLLASYSEDGLLK 504 (508)
T ss_pred CCccCCceEEEEecCCCcEEEEEcc----CcEEEEEEeecCc---eeeeeecccccccccccCcc-cchhhhhcccchhh
Confidence 222 1 12 1 58999999998654 3568888877666 34444444456665444444 67888888887655
Q ss_pred EE
Q psy2521 445 MD 446 (783)
Q Consensus 445 l~ 446 (783)
||
T Consensus 505 LW 506 (508)
T KOG0275|consen 505 LW 506 (508)
T ss_pred hc
Confidence 43
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.27 Score=49.16 Aligned_cols=209 Identities=15% Similarity=0.036 Sum_probs=113.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-------Ccc-ccccccccccCeeEEeeCCCEEEEEEeecCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-------GKD-YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGT 280 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-------g~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 280 (783)
..+....||++|.+++++.+..=.-...|.++|+.. .++ +.......+.....|+|-++.|++...+
T Consensus 94 ~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~----- 168 (327)
T KOG0643|consen 94 SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHED----- 168 (327)
T ss_pred CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCC-----
Confidence 457789999999999999987555567899999873 231 2222333455688999999999887622
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
..|-.+++.++. .+|-.......-+.++++|+|..+.+-.+ . .+.-.++|..+...
T Consensus 169 -----------G~is~~da~~g~---~~v~s~~~h~~~Ind~q~s~d~T~FiT~s-~---Dttakl~D~~tl~v------ 224 (327)
T KOG0643|consen 169 -----------GSISIYDARTGK---ELVDSDEEHSSKINDLQFSRDRTYFITGS-K---DTTAKLVDVRTLEV------ 224 (327)
T ss_pred -----------CcEEEEEcccCc---eeeechhhhccccccccccCCcceEEecc-c---Cccceeeeccceee------
Confidence 246666665542 12222222222345788999999876332 2 13445667665210
Q ss_pred CCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC-CcEEeecCC-------CCceEEEEEEeeCCE
Q psy2521 361 FPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPED-------ENRTLDVVAAVANNK 432 (783)
Q Consensus 361 ~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~-~~~~li~~~-------~~~~l~~~~~~~g~~ 432 (783)
.+.......-....++|--+++++....++ .++-......++.+ ++-.++-+. ....+..+.+..++.
T Consensus 225 --~Kty~te~PvN~aaisP~~d~VilgGGqeA--~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGk 300 (327)
T KOG0643|consen 225 --LKTYTTERPVNTAAISPLLDHVILGGGQEA--MDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGK 300 (327)
T ss_pred --EEEeeecccccceecccccceEEecCCcee--eeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCc
Confidence 111112222222357777666665332222 12333333323210 010111111 123345555554577
Q ss_pred EEEEEecCCeeEEEEEEC
Q psy2521 433 LIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~dl 450 (783)
.|.+..++|.-+|..+|.
T Consensus 301 sYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 301 SYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred ccccCCCCceEEEEEecc
Confidence 777777777777766654
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.16 Score=54.72 Aligned_cols=115 Identities=16% Similarity=0.267 Sum_probs=85.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc--ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP--EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.++.-+.+||.-|.+.-..+..| .+.+||+.+..+.- +....+--.+++|||-+..|+.+-
T Consensus 165 qsvRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV------------- 227 (673)
T KOG4378|consen 165 QSVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV------------- 227 (673)
T ss_pred CeEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe-------------
Confidence 45667889999999988876655 58999998765442 112222225899999988777665
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
+...+|+.++++.....+.++|+.|- ..++++++|.+|+.-. ...+|+.+|+..
T Consensus 228 --G~Dkki~~yD~~s~~s~~~l~y~~Pl-----stvaf~~~G~~L~aG~----s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 228 --GYDKKINIYDIRSQASTDRLTYSHPL-----STVAFSECGTYLCAGN----SKGELIAYDMRS 281 (673)
T ss_pred --cccceEEEeecccccccceeeecCCc-----ceeeecCCceEEEeec----CCceEEEEeccc
Confidence 34558999999988888888887653 4689999999998643 346999999987
|
|
| >COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.40 E-value=1.4 Score=51.86 Aligned_cols=251 Identities=12% Similarity=0.058 Sum_probs=132.4
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEe-----------
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS----------- 228 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~----------- 228 (783)
...++++|..+++..+.+.. ...+|..+.. + ++.. ..+.+....|||+|+++++...
T Consensus 64 ~~~~spdg~~~~~~~~~~~~-~~~l~l~~~~-g----~~~~------~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 131 (620)
T COG1506 64 ELRWSPDGSVLAFVSTDGGR-VAQLYLVDVG-G----LITK------TAFGVSDARWSPDGDRIAFLTAEGASKRDGGDH 131 (620)
T ss_pred ccccCCCCCEEEEEeccCCC-cceEEEEecC-C----ceee------eecccccceeCCCCCeEEEEecccccccCCcee
Confidence 34557889988888865543 5677776542 2 1111 1234677899999999998311
Q ss_pred -----------cCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEE
Q psy2521 229 -----------KSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 297 (783)
Q Consensus 229 -----------~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~ 297 (783)
..|.+...++++|.++ ...........+..+.|.+|++.++........ ...-...+..
T Consensus 132 ~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 201 (620)
T COG1506 132 LFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDA---------DPWVTNLYVL 201 (620)
T ss_pred eeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeecccc---------CCceEeeEEE
Confidence 1122456777777766 333333344444456666667777766644320 0111122222
Q ss_pred EcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC----CcEEEEEECCCCCCCcccCCCCceeeecC-ccc
Q psy2521 298 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ----GSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDH 372 (783)
Q Consensus 298 ~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~----~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~ 372 (783)
...+. . +....+. ......+.+.+||+.+++....... ...+++.+...+... . .....+ ...
T Consensus 202 ~~~~~--~--~~~~~~~-~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----~--~~~~~~~~~~ 269 (620)
T COG1506 202 IEGNG--E--LESLTPG-EGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVD-----G--DLSSGDDTRG 269 (620)
T ss_pred ecCCC--c--eEEEcCC-CceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccccc-----e--eeccCCcccC
Confidence 22111 1 2222222 2345678899999988887665331 256667663332110 0 000000 011
Q ss_pred eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC-eeEEEEEEC
Q psy2521 373 HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV-RSVMDLHDL 450 (783)
Q Consensus 373 ~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g-~~~l~~~dl 450 (783)
... ...-+++.++|.+........++.++..+.. ..+. ..+...+..+.. +++.+++.+.... .+++++++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~----~~~~-~~~~~~v~~f~~-~~~~~~~~~s~~~~p~~i~~~~~ 343 (620)
T COG1506 270 AWAVEGGLDGDGLLFIATDGGGSSPLFRVDDLGGG----VEGL-SGDDGGVPGFDV-DGRKLALAYSSPTEPPEIYLYDR 343 (620)
T ss_pred cHHhccccCCCcEEEEEecCCCceEEEEEeccCCc----eeee-cCCCceEEEEee-CCCEEEEEecCCCCccceEEEcC
Confidence 111 1224667788777765555556666654433 2222 233344555555 5578887777654 678999886
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.15 Score=56.23 Aligned_cols=229 Identities=13% Similarity=0.114 Sum_probs=113.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..+++.|.|.+||= |++..+++||.+.||..+....-......++|.|.++.=+......
T Consensus 402 ~Vr~iSvdp~G~wlas-----GsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~------------- 463 (733)
T KOG0650|consen 402 LVRSISVDPSGEWLAS-----GSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVG------------- 463 (733)
T ss_pred eEEEEEecCCcceeee-----cCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEec-------------
Confidence 4678899999999883 5566789999999998765433322336899999986433332111
Q ss_pred CCceEEEEE--cCCC---CCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC--cEEEEEECCCCCCCcccCCCC
Q psy2521 290 MGQKIYYHV--LGTE---QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG--SDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 290 ~~~~v~~~~--lgt~---~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~--~~l~~~dl~~g~~~~l~~~~~ 362 (783)
. .+.+.+ +|+. ...+.+++..+... .||+. ++.......+. ..|.+
T Consensus 464 -~-~~~ivnp~~G~~~e~~~t~ell~~~~~~~--------~p~~~-~~~W~~~~~~e~~~~v~~---------------- 516 (733)
T KOG0650|consen 464 -E-CVLIVNPIFGDRLEVGPTKELLASAPNES--------EPDAA-VVTWSRASLDELEKGVCI---------------- 516 (733)
T ss_pred -C-ceEEeCccccchhhhcchhhhhhcCCCcc--------CCccc-ceeechhhhhhhccceEE----------------
Confidence 1 122221 2211 01111222222111 22331 11111000000 00111
Q ss_pred ceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 363 LKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 363 ~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
.+......-. .|..+|++|..+...+ .+..++...+.... .+.-+....+.+....+-+..-.+++...+
T Consensus 517 ---~I~~~k~i~~vtWHrkGDYlatV~~~~-~~~~VliHQLSK~~---sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~-- 587 (733)
T KOG0650|consen 517 ---VIKHPKSIRQVTWHRKGDYLATVMPDS-GNKSVLIHQLSKRK---SQSPFRKSKGLVQRVKFHPSKPYLFVATQR-- 587 (733)
T ss_pred ---EEecCCccceeeeecCCceEEEeccCC-CcceEEEEeccccc---ccCchhhcCCceeEEEecCCCceEEEEecc--
Confidence 1111111111 2777888887765543 34568888886533 111121222333222222221455555443
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+||+..++.+..+-...-.++.++..+.|+.+++ .|+..---+|.+|+
T Consensus 588 --~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~--gs~d~k~~WfDldl 638 (733)
T KOG0650|consen 588 --SVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLIL--GSYDKKMCWFDLDL 638 (733)
T ss_pred --ceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEE--ecCCCeeEEEEccc
Confidence 4899999544433333333566888899998887774 35555445566665
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=96.37 E-value=1.4 Score=44.96 Aligned_cols=243 Identities=14% Similarity=0.115 Sum_probs=124.3
Q ss_pred CCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc--cccCeeEEeeCCCEEEEEEeecC
Q psy2521 200 PNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 200 ~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
|...-.+..-.+....|+|||..+|- +|.| .+|++|++.+-..---++.+ ....++.|.+|++.|+-...|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aS----gG~D-r~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD-- 111 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFAS----GGSD-RAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD-- 111 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEee----cCCc-ceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCC--
Confidence 33333344455778999999998873 3554 68999997654321111111 123578999999988755522
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
..|+.++..+++. ++....+..+...+..+.-|-.|+.+. .+...+.++|..+..+.
T Consensus 112 --------------k~v~~wD~~tG~~----~rk~k~h~~~vNs~~p~rrg~~lv~Sg---sdD~t~kl~D~R~k~~~-- 168 (338)
T KOG0265|consen 112 --------------KTVRGWDAETGKR----IRKHKGHTSFVNSLDPSRRGPQLVCSG---SDDGTLKLWDIRKKEAI-- 168 (338)
T ss_pred --------------ceEEEEeccccee----eehhccccceeeecCccccCCeEEEec---CCCceEEEEeecccchh--
Confidence 3688888877643 222222223433444455566666543 23467888888762111
Q ss_pred cCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEE
Q psy2521 358 SGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIV 435 (783)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~ 435 (783)
+ +......-.. .|...++.+.. ++-+..|-.+|+...+ ..-++. +..+.+..+... .|..+.-
T Consensus 169 ------~-t~~~kyqltAv~f~d~s~qv~s----ggIdn~ikvWd~r~~d---~~~~ls-Gh~DtIt~lsls~~gs~lls 233 (338)
T KOG0265|consen 169 ------K-TFENKYQLTAVGFKDTSDQVIS----GGIDNDIKVWDLRKND---GLYTLS-GHADTITGLSLSRYGSFLLS 233 (338)
T ss_pred ------h-ccccceeEEEEEecccccceee----ccccCceeeeccccCc---ceEEee-cccCceeeEEeccCCCcccc
Confidence 1 1111011111 25445555442 2334557777775433 222332 223445455444 3345554
Q ss_pred EEecCCeeEEEEEECC---CCceeeeecCCCeEEE-------eeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 436 HYIQNVRSVMDLHDLN---TGKRLHSFPLDLGQIT-------HISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~---~G~~~~~l~~~~g~v~-------~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++++ .+.+||.. .++. .+..-.|.+. .-+++|+++.+-+..++ ..+|.+|.
T Consensus 234 nsMd~---tvrvwd~rp~~p~~R--~v~if~g~~hnfeknlL~cswsp~~~~i~ags~d----r~vyvwd~ 295 (338)
T KOG0265|consen 234 NSMDN---TVRVWDVRPFAPSQR--CVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSAD----RFVYVWDT 295 (338)
T ss_pred ccccc---eEEEEEecccCCCCc--eEEEeecchhhhhhhcceeeccCCCCcccccccc----ceEEEeec
Confidence 55544 46667652 2222 1211122221 33566766555433332 35788886
|
|
| >KOG2237|consensus | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.013 Score=65.30 Aligned_cols=85 Identities=21% Similarity=0.237 Sum_probs=67.2
Q ss_pred CCCeEEEeCCCCcCCCC-cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEee-CCCE
Q psy2521 191 TGSTEVFLDPNKLSKDG-TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTH-DHKG 268 (783)
Q Consensus 191 ~g~~~~llD~n~~~~~g-~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~Wsp-Dg~~ 268 (783)
+...+|+||.|++++++ ++..+-.+.|||.++|||.....|++..++ |.++..+.+...... -.++..+|.. ||+.
T Consensus 119 ~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~~~~~~~~-~g~~y~~w~~~dg~~ 196 (712)
T KOG2237|consen 119 GDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTV-VIDVKFSGPVWTHDG-KGVSYLAWAKQDGED 196 (712)
T ss_pred CCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCcccee-eeeeccCCceeeccC-CceEeeeecccCCce
Confidence 44567999999999995 566666779999999999999999999998 999988876643322 2346889987 8888
Q ss_pred EEEEEeecC
Q psy2521 269 FFYNQYCDI 277 (783)
Q Consensus 269 l~y~~~~~~ 277 (783)
|.|...+..
T Consensus 197 l~~~t~~~~ 205 (712)
T KOG2237|consen 197 LLYGTEDEN 205 (712)
T ss_pred eeeeeeccc
Confidence 888876543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.031 Score=65.98 Aligned_cols=252 Identities=13% Similarity=0.115 Sum_probs=131.5
Q ss_pred eeEEECCCCc-EEEEEEec-------CCCceEEEEEEECCCCcc----ccccccccccCeeEEeeCCCE---EEEEEeec
Q psy2521 212 KLYAFSDNGK-HFAYCLSK-------SGSDWNTLHIKDVDTGKD----YPEVLKNVKFPSISWTHDHKG---FFYNQYCD 276 (783)
Q Consensus 212 ~~~~~SPDG~-~la~~~~~-------~G~d~~~i~v~Dl~tg~~----~~~~~~~~~~~~~~WspDg~~---l~y~~~~~ 276 (783)
..++|||++. ++|-.... +-+-.-+|+.+|..+.+. ........+|..++|++-|+. |.-...
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~-- 87 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGL-- 87 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccc--
Confidence 3478999996 44433211 112224677777766652 211223457789999988765 333321
Q ss_pred CCCCCCCCcccccCCceEEEEEcCC--CCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 277 INGTADGTETTAHMGQKIYYHVLGT--EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 277 ~~~~~~g~~~~~~~~~~v~~~~lgt--~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
.+..|-+++... ...+..++.....+.+-..++.+.+.+.-++- .+.+..+|+++|+.. .
T Consensus 88 -------------edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLA---SGa~~geI~iWDlnn-~- 149 (1049)
T KOG0307|consen 88 -------------EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLA---SGADDGEILIWDLNK-P- 149 (1049)
T ss_pred -------------cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceee---ccCCCCcEEEeccCC-c-
Confidence 122344444332 11111122222222233457888998884432 344558999999987 2
Q ss_pred CcccCCCCceeeecCccceeEE--EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE-EEeeC-
Q psy2521 355 GKISGKFPLKTVIPGMDHHHEI--IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV-AAVAN- 430 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~~~~~~--~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~-~~~~g- 430 (783)
..+..........+... |...-.+++-. ..++++...+|+...+ ....+.....+.....+ |-+++
T Consensus 150 -----~tP~~~~~~~~~~eI~~lsWNrkvqhILAS---~s~sg~~~iWDlr~~~--pii~ls~~~~~~~~S~l~WhP~~a 219 (1049)
T KOG0307|consen 150 -----ETPFTPGSQAPPSEIKCLSWNRKVSHILAS---GSPSGRAVIWDLRKKK--PIIKLSDTPGRMHCSVLAWHPDHA 219 (1049)
T ss_pred -----CCCCCCCCCCCcccceEeccchhhhHHhhc---cCCCCCceeccccCCC--cccccccCCCccceeeeeeCCCCc
Confidence 22221111111222222 32222233321 2345678888987643 12222222222222233 33332
Q ss_pred CEEEEEEecCCeeEEEEEECCCCc-eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~-~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..|++...++..+.|.+||++... .++.++.....|.+++|.+.++++.++.. .-.+++.++.
T Consensus 220 Tql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsg---kD~~ii~wN~ 283 (1049)
T KOG0307|consen 220 TQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSG---KDNRIICWNP 283 (1049)
T ss_pred eeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhccc---CCCCeeEecC
Confidence 468888888888999999985322 33445444333558889888877776543 3347888888
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.05 Score=60.08 Aligned_cols=169 Identities=9% Similarity=0.008 Sum_probs=87.5
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+.++.|.| |..+||...+. .+|.+|.+.++..-..+.... .- ...-++.|++.++.....+ ....
T Consensus 628 t~vtDl~WdPFD~~rLAVa~dd-----g~i~lWr~~a~gl~e~~~tPe--~~--lt~h~eKI~slRfHPLAad---vLa~ 695 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDD-----GQINLWRLTANGLPENEMTPE--KI--LTIHGEKITSLRFHPLAAD---VLAV 695 (1012)
T ss_pred ceeeecccCCCChHHeeecccC-----ceEEEEEeccCCCCcccCCcc--ee--eecccceEEEEEecchhhh---Hhhh
Confidence 4577889998 88889987653 467777765543211111100 01 1234556666665432110 0001
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...+..|.+|+|.+....-.+ ... .+-+++++|||||+.++-...+ ..|++.+..+++ ..+.+... .+
T Consensus 696 asyd~Ti~lWDl~~~~~~~~l--~gH--tdqIf~~AWSpdGr~~AtVcKD----g~~rVy~Prs~e-~pv~Eg~g---pv 763 (1012)
T KOG1445|consen 696 ASYDSTIELWDLANAKLYSRL--VGH--TDQIFGIAWSPDGRRIATVCKD----GTLRVYEPRSRE-QPVYEGKG---PV 763 (1012)
T ss_pred hhccceeeeeehhhhhhhhee--ccC--cCceeEEEECCCCcceeeeecC----ceEEEeCCCCCC-CccccCCC---Cc
Confidence 234557888888765432222 221 2245789999999999865433 578888876632 11111110 01
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcC
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINL 402 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~ 402 (783)
..+.+. -.|.-||+.++++.-......+|..++.
T Consensus 764 gtRgAR-i~wacdgr~viv~Gfdk~SeRQv~~Y~A 797 (1012)
T KOG1445|consen 764 GTRGAR-ILWACDGRIVIVVGFDKSSERQVQMYDA 797 (1012)
T ss_pred cCccee-EEEEecCcEEEEecccccchhhhhhhhh
Confidence 111111 1477788777665433222223444443
|
|
| >COG1770 PtrB Protease II [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.32 E-value=2.6 Score=48.10 Aligned_cols=257 Identities=14% Similarity=0.137 Sum_probs=140.4
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEEC
Q psy2521 163 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 242 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl 242 (783)
.++++..+.|.....+..+..|-+++..++++ +.| .++ -...+++|.+||+.+-|+.........+++-..+
T Consensus 136 ~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~--~~d--~i~----~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~ 207 (682)
T COG1770 136 ISPDHNLLAYSVDVLGDEQYTLRFKDLATGEE--LPD--EIT----NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRL 207 (682)
T ss_pred eCCCCceEEEEEecccccEEEEEEEecccccc--cch--hhc----ccccceEEecCCCeEEEEEEcCCCCcceEEEEec
Confidence 34677788888887778888888887654432 211 111 0145689999999999998877766677777776
Q ss_pred CCCcccc-cccccc---ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCee
Q psy2521 243 DTGKDYP-EVLKNV---KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL 318 (783)
Q Consensus 243 ~tg~~~~-~~~~~~---~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~ 318 (783)
.+-.... +..+.. .+-++.=+-..+.|+....+ ....++++.....+..+..+|...+.+-.+
T Consensus 208 gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~-------------~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY 274 (682)
T COG1770 208 GTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGS-------------HITSEVRLLDADDPEAEPKVVLPRENGVEY 274 (682)
T ss_pred CCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCC-------------CcceeEEEEecCCCCCceEEEEEcCCCcEE
Confidence 5511111 111111 11122223344555544422 223478888877776666667666543332
Q ss_pred EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceE
Q psy2521 319 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKV 397 (783)
Q Consensus 319 ~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L 397 (783)
. ...-|.+.++.++...-...|+...+.. ....|+.++....... ..++--.++|++.-.. ....+|
T Consensus 275 ~----~eh~~d~f~i~sN~~gknf~l~~ap~~~-------~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~-~glp~v 342 (682)
T COG1770 275 S----VEHGGDRFYILSNADGKNFKLVRAPVSA-------DKSNWRELIPHREDVRLEGVDLFADHLVLLERQ-EGLPRV 342 (682)
T ss_pred e----eeecCcEEEEEecCCCcceEEEEccCCC-------ChhcCeeeeccCCCceeeeeeeeccEEEEEecc-cCCceE
Confidence 2 2233666666666543235566555511 1234666666544433 2455556777765444 445678
Q ss_pred EEEcCCCCCCCCcEEeecCCCCceE--EEEEEeeCCEEEEEEec-CCeeEEEEEECCCCce
Q psy2521 398 VTINLNNPCEKNWKTLIPEDENRTL--DVVAAVANNKLIVHYIQ-NVRSVMDLHDLNTGKR 455 (783)
Q Consensus 398 ~~~d~~~~~~~~~~~li~~~~~~~l--~~~~~~~g~~l~~~~~~-~g~~~l~~~dl~~G~~ 455 (783)
+..+..+++. ..+.-..+.... ..-.-++.+.|-+.+.. ....+++-+|+.+|+.
T Consensus 343 ~v~~~~~~~~---~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm~t~er 400 (682)
T COG1770 343 VVRDRKTGEE---RGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDMATGER 400 (682)
T ss_pred EEEecCCCce---eeEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeeccCCcE
Confidence 8888765541 222222111111 00011112455555543 4457899999988875
|
|
| >PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.023 Score=58.35 Aligned_cols=142 Identities=21% Similarity=0.234 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC------CCceeEEEEcCCcchhhhcccccccccchhhhCCC
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 691 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p 691 (783)
=+..++.+|.++.-+ .++-++||||||+.+...+..+ |.+=+-+....|+-....... .....-...=| |
T Consensus 88 wl~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~-~~~~~~~~~~g-p 163 (255)
T PF06028_consen 88 WLKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMND-DQNQNDLNKNG-P 163 (255)
T ss_dssp HHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC--TTTT-CSTT--B
T ss_pred HHHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccc-cchhhhhcccC-C
Confidence 345677788777444 5999999999999999988774 444444444444443322211 00000001124 4
Q ss_pred C-CHHHHHHHHhc-CcccCCCCCCCCCcCCcEEEEecC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEe
Q psy2521 692 N-NKTHFHNLLSY-SPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 763 (783)
Q Consensus 692 ~-~~~~~~~~~~~-sp~~~v~~~~~~~~~P~~Li~~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~ 763 (783)
. .-+.|..|.+. . .+++. ... +|-+.|. .|-+||...++.+..-++.. .+.+.-.++
T Consensus 164 ~~~~~~y~~l~~~~~--~~~p~-----~i~-VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~-------~~~Y~e~~v 228 (255)
T PF06028_consen 164 KSMTPMYQDLLKNRR--KNFPK-----NIQ-VLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNR-------AKSYQEKTV 228 (255)
T ss_dssp SS--HHHHHHHHTHG--GGSTT-----T-E-EEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTT-------SSEEEEEEE
T ss_pred cccCHHHHHHHHHHH--hhCCC-----CeE-EEEEecccCCCCCCCeEEeHHHHHHHHHHhhcc-------cCceEEEEE
Confidence 3 23445544443 2 22222 222 8999998 89999988887776666654 456666666
Q ss_pred CC--CCccCCccchhhhh
Q psy2521 764 QD--AGHGQGKALDIELK 779 (783)
Q Consensus 764 ~~--~gHg~~~~~~~~~~ 779 (783)
.| +.|.-.. ++..+.
T Consensus 229 ~G~~a~HS~Lh-eN~~V~ 245 (255)
T PF06028_consen 229 TGKDAQHSQLH-ENPQVD 245 (255)
T ss_dssp ESGGGSCCGGG-CCHHHH
T ss_pred ECCCCccccCC-CCHHHH
Confidence 54 6887654 344433
|
; PDB: 3LP5_A 3FLE_A 3DS8_A. |
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.15 Score=58.47 Aligned_cols=199 Identities=10% Similarity=0.117 Sum_probs=107.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+-+++||-++-+|-=+.| .++++|++...+.+..-...-..+.++|.|-++..|.+..
T Consensus 371 DILDlSWSKn~fLLSSSMD------KTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGS--------------- 429 (712)
T KOG0283|consen 371 DILDLSWSKNNFLLSSSMD------KTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGS--------------- 429 (712)
T ss_pred hheecccccCCeeEecccc------ccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeecc---------------
Confidence 3557889988866654443 5799999998877754334434478999997776666552
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC-----ce
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP-----LK 364 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~-----~~ 364 (783)
.+.++.+|.+-.. .+..+. +-......+.++|||++.++-...| ..++++..+. ++..... -+
T Consensus 430 LD~KvRiWsI~d~---~Vv~W~--Dl~~lITAvcy~PdGk~avIGt~~G----~C~fY~t~~l---k~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 430 LDGKVRLWSISDK---KVVDWN--DLRDLITAVCYSPDGKGAVIGTFNG----YCRFYDTEGL---KLVSDFHIRLHNKK 497 (712)
T ss_pred cccceEEeecCcC---eeEeeh--hhhhhheeEEeccCCceEEEEEecc----EEEEEEccCC---eEEEeeeEeeccCc
Confidence 2347888877432 223333 3234667899999999998876543 3444444331 0000000 00
Q ss_pred eeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCC-CCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 365 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~-~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
......--++.++.-+-+.+++.+|. .+|-.+|...... .+++-. ..........+. .+|++|+... +| +
T Consensus 498 k~~~~rITG~Q~~p~~~~~vLVTSnD----SrIRI~d~~~~~lv~KfKG~-~n~~SQ~~Asfs-~Dgk~IVs~s-eD--s 568 (712)
T KOG0283|consen 498 KKQGKRITGLQFFPGDPDEVLVTSND----SRIRIYDGRDKDLVHKFKGF-RNTSSQISASFS-SDGKHIVSAS-ED--S 568 (712)
T ss_pred cccCceeeeeEecCCCCCeEEEecCC----CceEEEeccchhhhhhhccc-ccCCcceeeeEc-cCCCEEEEee-cC--c
Confidence 00011111233333344568777765 3566777633220 001111 011122233333 3667777666 44 5
Q ss_pred EEEEEEC
Q psy2521 444 VMDLHDL 450 (783)
Q Consensus 444 ~l~~~dl 450 (783)
.||+|+.
T Consensus 569 ~VYiW~~ 575 (712)
T KOG0283|consen 569 WVYIWKN 575 (712)
T ss_pred eEEEEeC
Confidence 7999987
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.17 Score=54.62 Aligned_cols=194 Identities=15% Similarity=0.121 Sum_probs=105.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc---ccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP---EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~---~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+....++|||+.|.. |.+..++-||||++-.... ++. ..+ ..++-|||.+ +.|+.+.+
T Consensus 468 iRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaC--yALa~spDak-vcFsccsd--------- 530 (705)
T KOG0639|consen 468 IRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPAC--YALAISPDAK-VCFSCCSD--------- 530 (705)
T ss_pred eeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhh--hhhhcCCccc-eeeeeccC---------
Confidence 778999999999875 4557899999998754321 121 223 4677899986 66666432
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
..|.+|+|-.. .+|-+.....+-...+.+|+||..|. .+.-.+.+.-+|+..|. ++
T Consensus 531 ------GnI~vwDLhnq----~~VrqfqGhtDGascIdis~dGtklW----TGGlDntvRcWDlregr--ql-------- 586 (705)
T KOG0639|consen 531 ------GNIAVWDLHNQ----TLVRQFQGHTDGASCIDISKDGTKLW----TGGLDNTVRCWDLREGR--QL-------- 586 (705)
T ss_pred ------CcEEEEEcccc----eeeecccCCCCCceeEEecCCCceee----cCCCccceeehhhhhhh--hh--------
Confidence 14666777532 23333322222224577899998874 23233788899998741 11
Q ss_pred eecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 366 VIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 366 l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
.-.++.... . -..|.++|+.+-- .+..+......+++ +-.+...+..++.--+..- ++.+++...|..-
T Consensus 587 qqhdF~SQIfSLg~cP~~dWlavGM----ens~vevlh~skp~----kyqlhlheScVLSlKFa~c-GkwfvStGkDnlL 657 (705)
T KOG0639|consen 587 QQHDFSSQIFSLGYCPTGDWLAVGM----ENSNVEVLHTSKPE----KYQLHLHESCVLSLKFAYC-GKWFVSTGKDNLL 657 (705)
T ss_pred hhhhhhhhheecccCCCccceeeec----ccCcEEEEecCCcc----ceeecccccEEEEEEeccc-CceeeecCchhhh
Confidence 011111111 1 1457888887632 23446666655544 2223333345554322233 4555555555433
Q ss_pred EEEEEECCCCcee
Q psy2521 444 VMDLHDLNTGKRL 456 (783)
Q Consensus 444 ~l~~~dl~~G~~~ 456 (783)
..|+.. -|..+
T Consensus 658 nawrtP--yGasi 668 (705)
T KOG0639|consen 658 NAWRTP--YGASI 668 (705)
T ss_pred hhccCc--cccce
Confidence 344432 35443
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=96.22 E-value=1.2 Score=48.05 Aligned_cols=228 Identities=12% Similarity=0.112 Sum_probs=125.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+-.+.|+-+|.+|+=+ |. ..++.+||..+|+..+ .++...-.-.+.|- +...|+-...
T Consensus 278 PI~slKWnk~G~yilS~----~v-D~ttilwd~~~g~~~q~f~~~s~~~lDVdW~-~~~~F~ts~t-------------- 337 (524)
T KOG0273|consen 278 PIFSLKWNKKGTYILSG----GV-DGTTILWDAHTGTVKQQFEFHSAPALDVDWQ-SNDEFATSST-------------- 337 (524)
T ss_pred ceEEEEEcCCCCEEEec----cC-CccEEEEeccCceEEEeeeeccCCccceEEe-cCceEeecCC--------------
Confidence 36778999999998743 22 2578899999998654 23332211357895 4445554331
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+++.+++..... ..+..-+++ ...+.|.|-|+-|+-.+.+ ..+.++....... ...+-.
T Consensus 338 --d~~i~V~kv~~~~P~--~t~~GH~g~--V~alk~n~tg~LLaS~SdD----~TlkiWs~~~~~~--------~~~l~~ 399 (524)
T KOG0273|consen 338 --DGCIHVCKVGEDRPV--KTFIGHHGE--VNALKWNPTGSLLASCSDD----GTLKIWSMGQSNS--------VHDLQA 399 (524)
T ss_pred --CceEEEEEecCCCcc--eeeecccCc--eEEEEECCCCceEEEecCC----CeeEeeecCCCcc--------hhhhhh
Confidence 225677777755433 233332322 3578899999877643322 3455555433100 111111
Q ss_pred CccceeE-EEEeeCCE-------EEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 369 GMDHHHE-IIANNGPE-------LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 369 ~~~~~~~-~~s~dg~~-------l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
....-+. .|+|+|.- +.+.+. +.+.-|-.+|+..+.+ .-.+..++ .-+..-..+++ +..++....+
T Consensus 400 Hskei~t~~wsp~g~v~~n~~~~~~l~sa--s~dstV~lwdv~~gv~--i~~f~kH~-~pVysvafS~~-g~ylAsGs~d 473 (524)
T KOG0273|consen 400 HSKEIYTIKWSPTGPVTSNPNMNLMLASA--SFDSTVKLWDVESGVP--IHTLMKHQ-EPVYSVAFSPN-GRYLASGSLD 473 (524)
T ss_pred hccceeeEeecCCCCccCCCcCCceEEEe--ecCCeEEEEEccCCce--eEeeccCC-CceEEEEecCC-CcEEEecCCC
Confidence 1111222 47777641 111111 1233466667766541 23344444 33343334444 5555555555
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEec
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss 484 (783)
+ .|.+|+..+|+..+.... .+.|..+.|+.+++.+-..++.
T Consensus 474 g--~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 474 G--CVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred C--eeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecC
Confidence 4 578888888988776665 4567788899999888776653
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.15 Score=60.06 Aligned_cols=119 Identities=12% Similarity=-0.016 Sum_probs=71.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+.++.||||++++|-..- .+.|.+|+..+.+.+.... .....-+++|-|=|++|+-.+.|
T Consensus 131 DV~Dv~Wsp~~~~lvS~s~-----DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD------------- 192 (942)
T KOG0973|consen 131 DVLDVNWSPDDSLLVSVSL-----DNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD------------- 192 (942)
T ss_pred ccceeccCCCccEEEEecc-----cceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC-------------
Confidence 4778999999998875432 3679999998885443221 12233589999999988765522
Q ss_pred cCCceEEEEEcCCCCCCceeE---EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPV---VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v---~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
+.|.+|++..-+-+. .| |++.....++..+.|||||++|+....-....+-+-+++-.
T Consensus 193 ---rtikvwrt~dw~i~k-~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~ 253 (942)
T KOG0973|consen 193 ---RTLKVWRTSDWGIEK-SITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG 253 (942)
T ss_pred ---ceEEEEEcccceeeE-eeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecC
Confidence 245555543321111 11 22111224677899999999997543222222555555543
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.01 Score=41.49 Aligned_cols=29 Identities=14% Similarity=0.118 Sum_probs=21.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHI 239 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v 239 (783)
...+.|||||++|+|+....+....+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 46799999999999999988323367775
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.18 Score=49.81 Aligned_cols=195 Identities=16% Similarity=0.167 Sum_probs=111.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-+...+||.|.++|.- +|. ..-|+|+|+..-+.-+..+.+. ..-.+.|.-..+.|+-++ +
T Consensus 102 ivk~~af~~ds~~llt----gg~-ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSa-d------------ 163 (334)
T KOG0278|consen 102 IVKAVAFSQDSNYLLT----GGQ-EKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSA-D------------ 163 (334)
T ss_pred eeeeEEecccchhhhc----cch-HHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeec-c------------
Confidence 3677889999888763 233 3568999987655444333221 113577887777777553 2
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.+|+..++.....+-+ +.. ..+..+|+||++|.+.- .+.|-.+|..+. +.++ -..+
T Consensus 164 ---d~tVRLWD~rTgt~v~sL~~--~s~---VtSlEvs~dG~ilTia~-----gssV~Fwdaksf--~~lK----s~k~- 223 (334)
T KOG0278|consen 164 ---DKTVRLWDHRTGTEVQSLEF--NSP---VTSLEVSQDGRILTIAY-----GSSVKFWDAKSF--GLLK----SYKM- 223 (334)
T ss_pred ---CCceEEEEeccCcEEEEEec--CCC---CcceeeccCCCEEEEec-----CceeEEeccccc--ccee----eccC-
Confidence 12466666665533222322 221 24788999999987642 246777787662 1110 0000
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
+....-...+|+. .+|+..+ ..+.++++|-.++.. ....-.+....+-.+.+..++.++.+..+||.-+|++
T Consensus 224 -P~nV~SASL~P~k-~~fVaGg---ed~~~~kfDy~TgeE---i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 224 -PCNVESASLHPKK-EFFVAGG---EDFKVYKFDYNTGEE---IGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred -ccccccccccCCC-ceEEecC---cceEEEEEeccCCce---eeecccCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 0111111367775 5655443 457899999988751 2222122233344555555589999999998777776
Q ss_pred EEC
Q psy2521 448 HDL 450 (783)
Q Consensus 448 ~dl 450 (783)
...
T Consensus 296 t~~ 298 (334)
T KOG0278|consen 296 TTP 298 (334)
T ss_pred ecC
Confidence 654
|
|
| >PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.029 Score=63.22 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=87.4
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH-HHHHHHHcCCEEEEEecCCCCCCC----ChhHH--hhcccc
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI-SRCMFLRHFNGIYAIPNIRGGGEL----GEDWH--NAGRLL 610 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~RG~g~~----G~~~~--~~g~~~ 610 (783)
.|...+.+|.+. ++ -.+..+-||+.......-.. .+..-++ +||+++.-|- |+.+. ...|. .....+
T Consensus 16 ~i~fev~LP~~W--Ng--R~~~~GgGG~~G~i~~~~~~~~~~~~~~-~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW--NG--RFLQVGGGGFAGGINYADGKASMATALA-RGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh--cc--CeEEECCCeeeCcccccccccccchhhh-cCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 677777778755 23 35666666665554433211 0223455 6999999884 21111 11121 111223
Q ss_pred CCcChHHHHHHHHHHHHHcCC-CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKY-TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~-~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
+....+.+...+.+.|++.-| ..|++-...|.|.||-..+.++.++|+.|.++|+.+|.+++..+
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHL 155 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHH
Confidence 444556677778888887755 47789999999999999999999999999999999998877543
|
It also includes several bacterial homologues of unknown function. |
| >KOG3967|consensus | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.039 Score=53.09 Aligned_cols=119 Identities=12% Similarity=0.038 Sum_probs=68.9
Q ss_pred EEEEecCcCCCCCccEEEEecCCCCCc-------------cCCc-CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 542 YIIHRVGALRNRRNPVIIYGYGGYGVS-------------VLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 542 ~~~~p~~~~~~~~~P~ll~~hGg~~~~-------------~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
+++..++. ...+..++|++||..-.. .+-+ -.+.+.+..+ .||-|++.|.-- -+.+++.-
T Consensus 89 FiF~s~~~-lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~-~Gygviv~N~N~----~~kfye~k 162 (297)
T KOG3967|consen 89 FIFMSEDA-LTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVA-EGYGVIVLNPNR----ERKFYEKK 162 (297)
T ss_pred eEEEChhH-hcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHH-cCCcEEEeCCch----hhhhhhcc
Confidence 44554543 245567899999963111 1111 1122334444 599999988752 22233321
Q ss_pred cccC--CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCC
Q psy2521 608 RLLK--KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVG 668 (783)
Q Consensus 608 ~~~~--~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~ 668 (783)
.... -....+-+..+-.+++.. ..+..|+++-||+||++++-++.++|+ .|+.+...++
T Consensus 163 ~np~kyirt~veh~~yvw~~~v~p--a~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 163 RNPQKYIRTPVEHAKYVWKNIVLP--AKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred cCcchhccchHHHHHHHHHHHhcc--cCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 1111 123345555555555543 567899999999999999999999987 3444444444
|
|
| >KOG4840|consensus | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.023 Score=55.10 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=75.0
Q ss_pred cEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 556 PVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 556 P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
-.|||+ ||-+.... --|.......|.+.+|..+.+-.|.+- +||. ..-..+.+|+..++++++-.++.
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt--------~slk~D~edl~~l~~Hi~~~~fS- 106 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGT--------FSLKDDVEDLKCLLEHIQLCGFS- 106 (299)
T ss_pred EEEEEE-cccCCCccccccHHHHHHHHhhccceeeeeecccccccccc--------ccccccHHHHHHHHHHhhccCcc-
Confidence 344444 55544322 223334455666789999999998753 3662 22335578999999998877654
Q ss_pred CCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchhh
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDML 673 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~~ 673 (783)
.+|.++|||-|..=++..+++. |.-..|+|+++|+.|.-
T Consensus 107 -t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 -TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred -cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 3899999999999888888543 55678999999998875
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.12 E-value=1.3 Score=48.75 Aligned_cols=211 Identities=12% Similarity=0.041 Sum_probs=116.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
-.+..++++|+++...... ...+.++|+++.+.......+....+++|+||++.+|..... ..
T Consensus 76 p~~i~v~~~~~~vyv~~~~----~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~-------------~~ 138 (381)
T COG3391 76 PAGVAVNPAGNKVYVTTGD----SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAG-------------NG 138 (381)
T ss_pred ccceeeCCCCCeEEEecCC----CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecc-------------cC
Confidence 4468899999976544322 256999998776655433222244689999999999887731 12
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...+...+-.+...... ++... .+ .+..++|||+.++... ...+.|.++|.++. .+....+......+.
T Consensus 139 ~~~vsvid~~t~~~~~~-~~vG~-~P---~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~---~v~~~~~~~~~~~~~ 207 (381)
T COG3391 139 NNTVSVIDAATNKVTAT-IPVGN-TP---TGVAVDPDGNKVYVTN---SDDNTVSVIDTSGN---SVVRGSVGSLVGVGT 207 (381)
T ss_pred CceEEEEeCCCCeEEEE-EecCC-Cc---ceEEECCCCCeEEEEe---cCCCeEEEEeCCCc---ceeccccccccccCC
Confidence 34566666554422111 22211 22 5688999999987664 23489999997662 110000000011111
Q ss_pred cceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe-ecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 371 DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 371 ~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l-i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
....-.++++|.++|+.-... ....+..+|..+.. .... .+........-...++++.+++.... ...+.+.|
T Consensus 208 ~P~~i~v~~~g~~~yV~~~~~-~~~~v~~id~~~~~---v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~--~~~V~vid 281 (381)
T COG3391 208 GPAGIAVDPDGNRVYVANDGS-GSNNVLKIDTATGN---VTATDLPVGSGAPRGVAVDPAGKAAYVANSQ--GGTVSVID 281 (381)
T ss_pred CCceEEECCCCCEEEEEeccC-CCceEEEEeCCCce---EEEeccccccCCCCceeECCCCCEEEEEecC--CCeEEEEe
Confidence 112225899999888754432 23568888887654 1111 22221112222233444566655444 45788888
Q ss_pred CCCCce
Q psy2521 450 LNTGKR 455 (783)
Q Consensus 450 l~~G~~ 455 (783)
..+.+.
T Consensus 282 ~~~~~v 287 (381)
T COG3391 282 GATDRV 287 (381)
T ss_pred CCCCce
Confidence 755444
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.18 Score=54.70 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=86.4
Q ss_pred EEECCCCcEEEEEEecC---CCc---eEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 214 YAFSDNGKHFAYCLSKS---GSD---WNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~---G~d---~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+.|-+.|++|.+.+... +.- ...||++++.......+ ...+. ...++|.|++++|..+...
T Consensus 228 LkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~p-Vhdf~W~p~S~~F~vi~g~----------- 295 (561)
T COG5354 228 LKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDP-VHDFTWEPLSSRFAVISGY----------- 295 (561)
T ss_pred EEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceecccccc-ceeeeecccCCceeEEecc-----------
Confidence 67999999999887542 111 15799999874432222 11221 2589999999999998822
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.+..+-.+++.+. +++-.|.... ..+.+||.++||++..-. .-...+-++|..+. ......
T Consensus 296 ---~pa~~s~~~lr~N-----l~~~~Pe~~r--NT~~fsp~~r~il~agF~-nl~gni~i~~~~~r--------f~~~~~ 356 (561)
T COG5354 296 ---MPASVSVFDLRGN-----LRFYFPEQKR--NTIFFSPHERYILFAGFD-NLQGNIEIFDPAGR--------FKVAGA 356 (561)
T ss_pred ---cccceeecccccc-----eEEecCCccc--ccccccCcccEEEEecCC-ccccceEEeccCCc--------eEEEEE
Confidence 2335566666543 4555554332 235679999999985432 22356667777651 011112
Q ss_pred ecCccceeEEEEeeCCEEEEE
Q psy2521 367 IPGMDHHHEIIANNGPELIVK 387 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~ 387 (783)
+.+....+.-|+|||+.++..
T Consensus 357 ~~~~n~s~~~wspd~qF~~~~ 377 (561)
T COG5354 357 FNGLNTSYCDWSPDGQFYDTD 377 (561)
T ss_pred eecCCceEeeccCCceEEEec
Confidence 334444555699998765543
|
|
| >KOG2183|consensus | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.019 Score=60.81 Aligned_cols=131 Identities=16% Similarity=0.240 Sum_probs=80.0
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc---HHHHHHHHcCCEEEEEecCCC---CCCCChh-HHhhccc
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRG---GGELGED-WHNAGRL 609 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG---~g~~G~~-~~~~g~~ 609 (783)
.+.+..+..-..+-..+..|+++|. |. ..... .|. .-+..+..+.+-.++.+.+|= +--||.. +..+...
T Consensus 63 ~tF~qRylin~~fw~~g~gPIffYt-GN-EGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hl 139 (492)
T KOG2183|consen 63 KTFDQRYLINDDFWKKGEGPIFFYT-GN-EGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHL 139 (492)
T ss_pred cceeeEEEEecccccCCCCceEEEe-CC-cccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhh
Confidence 3444444444444333446776664 32 22221 111 112233446688899999995 2233433 2222111
Q ss_pred --cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE-cCCcc
Q psy2521 610 --LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI-LVGAL 670 (783)
Q Consensus 610 --~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~-~~~~~ 670 (783)
..-+..+.|+...+.+|+...-.....|.++|+|+||+|+++.=..+|.+..++++ .+|++
T Consensus 140 gyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 140 GYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 23355689999999999887556667899999999999999999999997766654 45543
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=96.04 E-value=1.2 Score=48.54 Aligned_cols=108 Identities=15% Similarity=0.135 Sum_probs=71.2
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
...|.|.| .||.... ...+.|+|.++...+.+...+...+-+.++|||..|+..+.+ .
T Consensus 412 ~~~fhpsg-~va~Gt~-----~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d----------------~ 469 (626)
T KOG2106|consen 412 CADFHPSG-VVAVGTA-----TGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD----------------N 469 (626)
T ss_pred EeeccCcc-eEEEeec-----cceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC----------------C
Confidence 46688888 6776543 246899999997666655455555788999999999988743 2
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d 348 (783)
.||++++..+...- ........ .++..+.||+|++++.-.+ ...+|.++.
T Consensus 470 ~iyiy~Vs~~g~~y-~r~~k~~g-s~ithLDwS~Ds~~~~~~S----~d~eiLyW~ 519 (626)
T KOG2106|consen 470 HIYIYRVSANGRKY-SRVGKCSG-SPITHLDWSSDSQFLVSNS----GDYEILYWK 519 (626)
T ss_pred eEEEEEECCCCcEE-EEeeeecC-ceeEEeeecCCCceEEecc----CceEEEEEc
Confidence 47777776543221 12222222 4567899999999986332 225676663
|
|
| >COG3150 Predicted esterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.086 Score=49.10 Aligned_cols=38 Identities=16% Similarity=0.009 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR 656 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~ 656 (783)
...++-++-++++. .|+ .++|.|-|.|||.+.++..+.
T Consensus 43 ~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 43 QQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred HHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHh
Confidence 35555666666552 333 389999999999999998875
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=95.99 E-value=3.8 Score=46.36 Aligned_cols=235 Identities=12% Similarity=0.116 Sum_probs=127.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc---ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK---NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+..+++|.+.+.||.+... ..|-+|++..+=.+...+. +....+++|+ +|.+||-+..
T Consensus 28 I~slA~s~kS~~lAvsRt~-----g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~------------- 88 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTD-----GNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGL------------- 88 (691)
T ss_pred eEEEEEeccCCceeeeccC-----CcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecC-------------
Confidence 6678899999999976543 3477888877644333332 2234689998 5556764442
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|..|++-+.. ....++... .-..+++.+|.+..+++...+ .-++.++...+ .+ .....+
T Consensus 89 ---sg~i~EwDl~~lk--~~~~~d~~g--g~IWsiai~p~~~~l~Igcdd----Gvl~~~s~~p~---~I----~~~r~l 150 (691)
T KOG2048|consen 89 ---SGSITEWDLHTLK--QKYNIDSNG--GAIWSIAINPENTILAIGCDD----GVLYDFSIGPD---KI----TYKRSL 150 (691)
T ss_pred ---CceEEEEecccCc--eeEEecCCC--cceeEEEeCCccceEEeecCC----ceEEEEecCCc---eE----EEEeec
Confidence 2356667765532 222222222 234567788888888875433 35555555442 22 222222
Q ss_pred cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec-------CCCCceEEEEEEeeCCEEEEEEe
Q psy2521 368 PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-------EDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 368 ~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~-------~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
...... .. .|.+++.+|+--+ ..+.|-.+|+..+.. .. ++. .++...+=++.+.. +..++...
T Consensus 151 ~rq~sRvLslsw~~~~~~i~~Gs----~Dg~Iriwd~~~~~t--~~-~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgD 222 (691)
T KOG2048|consen 151 MRQKSRVLSLSWNPTGTKIAGGS----IDGVIRIWDVKSGQT--LH-IITMQLDRLSKREPTIVWSVLFLR-DSTIASGD 222 (691)
T ss_pred ccccceEEEEEecCCccEEEecc----cCceEEEEEcCCCce--EE-EeeecccccccCCceEEEEEEEee-cCcEEEec
Confidence 222122 22 4888887776433 234566677765541 11 111 11112222233333 33333333
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
....|..||...|..++.+....+.|..+..+.+++.++.+ ..-+.+++|-.
T Consensus 223 --S~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsa----Gvd~~ii~~~~ 274 (691)
T KOG2048|consen 223 --SAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSA----GVDPKIIQYSL 274 (691)
T ss_pred --CCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEc----cCCCceEEEEe
Confidence 33578899998888766655555667677777777777632 22345666666
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.85 Score=51.86 Aligned_cols=239 Identities=13% Similarity=0.155 Sum_probs=123.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeC---CC-EEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHD---HK-GFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspD---g~-~l~y~~~~~~~~~~~g~~ 285 (783)
.+.+..+++|+.-+.++.. ...++|||+.+-+.+..........+....++ ++ ..+|+..
T Consensus 194 ~vtsL~~~~d~~~~ls~~R-----Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG----------- 257 (775)
T KOG0319|consen 194 AVTSLAFSEDSLELLSVGR-----DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAG----------- 257 (775)
T ss_pred heeeeeeccCCceEEEecc-----CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEec-----------
Confidence 5778899999988876643 25799999965543321111111124444444 33 3444541
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
....+.+++..+.. .+.....++.+..........+++.++++. ...|+++|.+++. ...
T Consensus 258 ----~~g~~~~~d~es~~--~~~~~~~~~~~e~~~~~~~~~~~~~l~vta-----eQnl~l~d~~~l~---------i~k 317 (775)
T KOG0319|consen 258 ----GSGVVQYWDSESGK--CVYKQRQSDSEEIDHLLAIESMSQLLLVTA-----EQNLFLYDEDELT---------IVK 317 (775)
T ss_pred ----CCceEEEEecccch--hhhhhccCCchhhhcceeccccCceEEEEc-----cceEEEEEccccE---------Eeh
Confidence 11234444433321 111111111122222334455666666542 2578888877631 111
Q ss_pred eecCcccee---EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGMDHHH---EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~~~~~---~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
-+.++.... .++.|+.+++++.||. +..++| ++.+.. .+ +++...+.++. +.....+.++++..+|..
T Consensus 318 ~ivG~ndEI~Dm~~lG~e~~~laVATNs--~~lr~y--~~~~~~---c~-ii~GH~e~vlS-L~~~~~g~llat~sKD~s 388 (775)
T KOG0319|consen 318 QIVGYNDEILDMKFLGPEESHLAVATNS--PELRLY--TLPTSY---CQ-IIPGHTEAVLS-LDVWSSGDLLATGSKDKS 388 (775)
T ss_pred hhcCCchhheeeeecCCccceEEEEeCC--CceEEE--ecCCCc---eE-EEeCchhheee-eeecccCcEEEEecCCce
Confidence 222333322 3688888999998885 456666 665554 23 66665455554 333333568888888876
Q ss_pred eEEEEEECCCCce--eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGKR--LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~~--~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
-.+|+++-..++. +...+....+|..+.++..+..++++.++.- ++-.+++
T Consensus 389 vilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~---tlK~W~l 441 (775)
T KOG0319|consen 389 VILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDC---TLKLWDL 441 (775)
T ss_pred EEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCc---eEEEecC
Confidence 6666664322221 1111222344555555556666776665543 4555665
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=95.93 E-value=1.5 Score=46.01 Aligned_cols=204 Identities=12% Similarity=0.080 Sum_probs=102.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCC----
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGT---- 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~---- 284 (783)
.+.+++|.+ ..++|.+-. . ...++++|-....+..++. .......++|-|-+..-+-+.... |.
T Consensus 100 dlr~~aWhq--H~~~fava~--n-ddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~------gIciW~ 168 (445)
T KOG2139|consen 100 DLRGVAWHQ--HIIAFAVAT--N-DDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA------GICIWS 168 (445)
T ss_pred ceeeEeech--hhhhhhhhc--c-CcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecc------eeEEEE
Confidence 377888888 455555432 2 2468888876644333221 122336889999875433332211 00
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
........+.. +.++. ....|+..+.+. ...+.+|.+||..++-.+ -+.+.|.++|.++|. ..|
T Consensus 169 ~s~tln~~r~~--~~~s~--~~~qvl~~pgh~-pVtsmqwn~dgt~l~tAS---~gsssi~iWdpdtg~------~~p-- 232 (445)
T KOG2139|consen 169 DSRTLNANRNI--RMMST--HHLQVLQDPGHN-PVTSMQWNEDGTILVTAS---FGSSSIMIWDPDTGQ------KIP-- 232 (445)
T ss_pred cCccccccccc--ccccc--cchhheeCCCCc-eeeEEEEcCCCCEEeecc---cCcceEEEEcCCCCC------ccc--
Confidence 00000000111 11111 112355555442 456889999998876432 233788899998852 122
Q ss_pred eeecCcccee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 365 TVIPGMDHHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 365 ~l~~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
+.....++. ..|||||+.|+-.+-. + .++|+... ..- +.+-..-..+.+-...|.+.|..|++.... .
T Consensus 233 -L~~~glgg~slLkwSPdgd~lfaAt~d-a-vfrlw~e~--q~w---t~erw~lgsgrvqtacWspcGsfLLf~~sg--s 302 (445)
T KOG2139|consen 233 -LIPKGLGGFSLLKWSPDGDVLFAATCD-A-VFRLWQEN--QSW---TKERWILGSGRVQTACWSPCGSFLLFACSG--S 302 (445)
T ss_pred -ccccCCCceeeEEEcCCCCEEEEeccc-c-eeeeehhc--ccc---eecceeccCCceeeeeecCCCCEEEEEEcC--C
Confidence 221122233 3699999987764432 2 34455222 100 111111122344456788887777776553 3
Q ss_pred eEEEEEEC
Q psy2521 443 SVMDLHDL 450 (783)
Q Consensus 443 ~~l~~~dl 450 (783)
+.||....
T Consensus 303 p~lysl~f 310 (445)
T KOG2139|consen 303 PRLYSLTF 310 (445)
T ss_pred ceEEEEee
Confidence 56766654
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=95.82 E-value=2.5 Score=43.25 Aligned_cols=236 Identities=15% Similarity=0.127 Sum_probs=122.3
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.-++.++.|.+||+.|.-.. .| .++++||+++|+.........++.+..= |-.++........
T Consensus 90 sgAVM~l~~~~d~s~i~S~g----tD-k~v~~wD~~tG~~~rk~k~h~~~vNs~~-p~rrg~~lv~Sgs----------- 152 (338)
T KOG0265|consen 90 SGAVMELHGMRDGSHILSCG----TD-KTVRGWDAETGKRIRKHKGHTSFVNSLD-PSRRGPQLVCSGS----------- 152 (338)
T ss_pred cceeEeeeeccCCCEEEEec----CC-ceEEEEecccceeeehhccccceeeecC-ccccCCeEEEecC-----------
Confidence 45788999999999875432 22 6899999999987654433333222211 4433333333111
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...++.+|++.+.. .+..++.+- -...+.|..++..++.. .=.++|-++|+..+. ..-.+
T Consensus 153 --dD~t~kl~D~R~k~--~~~t~~~ky---qltAv~f~d~s~qv~sg----gIdn~ikvWd~r~~d---------~~~~l 212 (338)
T KOG0265|consen 153 --DDGTLKLWDIRKKE--AIKTFENKY---QLTAVGFKDTSDQVISG----GIDNDIKVWDLRKND---------GLYTL 212 (338)
T ss_pred --CCceEEEEeecccc--hhhccccce---eEEEEEecccccceeec----cccCceeeeccccCc---------ceEEe
Confidence 23367777776442 222333221 23577888888776521 123788888986521 11123
Q ss_pred cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCC--CCCCCcEEeecCC-----CCceEEEEEEeeCCEEEEEEe
Q psy2521 368 PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKNWKTLIPED-----ENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 368 ~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~--~~~~~~~~li~~~-----~~~~l~~~~~~~g~~l~~~~~ 438 (783)
.+.... .. ..+++|..+. +|. -...|-.+|+.- +..+. ..+-++ +...+...|++++..+-+...
T Consensus 213 sGh~DtIt~lsls~~gs~ll--sns--Md~tvrvwd~rp~~p~~R~--v~if~g~~hnfeknlL~cswsp~~~~i~ags~ 286 (338)
T KOG0265|consen 213 SGHADTITGLSLSRYGSFLL--SNS--MDNTVRVWDVRPFAPSQRC--VKIFQGHIHNFEKNLLKCSWSPNGTKITAGSA 286 (338)
T ss_pred ecccCceeeEEeccCCCccc--ccc--ccceEEEEEecccCCCCce--EEEeecchhhhhhhcceeeccCCCCccccccc
Confidence 333222 22 4778887655 332 122355555532 22111 111111 123344445555444433222
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEE
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYH 493 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~ 493 (783)
. ..+|+||...-+.+-.++...|+|..+...|..+- ..+.+|.. ++|.
T Consensus 287 d---r~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~i-ils~~sdk---~i~l 334 (338)
T KOG0265|consen 287 D---RFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPI-ILSCSSDK---TIYL 334 (338)
T ss_pred c---ceEEEeecccccEEEEcCCcceeEEEeeecCCCcE-EEEeccCc---eeEe
Confidence 2 36899998322344444444788877777776653 34444432 4554
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.14 Score=53.99 Aligned_cols=191 Identities=12% Similarity=0.095 Sum_probs=101.8
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
..+.|.|+|++|+-.+.. . .+-+|+.-+-..+ .+.+.-+.+ .....||++|.|++-
T Consensus 100 ~~v~WtPeGRRLltgs~S--------------G--EFtLWNg~~fnFE--tilQaHDs~--Vr~m~ws~~g~wmiS---- 155 (464)
T KOG0284|consen 100 NVVRWTPEGRRLLTGSQS--------------G--EFTLWNGTSFNFE--TILQAHDSP--VRTMKWSHNGTWMIS---- 155 (464)
T ss_pred eeEEEcCCCceeEeeccc--------------c--cEEEecCceeeHH--HHhhhhccc--ceeEEEccCCCEEEE----
Confidence 578999999999977721 1 1222332111111 122222322 357899999999872
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-cee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li 414 (783)
++...-|-+++..-. ....+.... ... ..|||....|+-.++. +.|-.+|...+++ -+.|.
T Consensus 156 gD~gG~iKyWqpnmn----------nVk~~~ahh~eaIRdlafSpnDskF~t~SdD----g~ikiWdf~~~ke--e~vL~ 219 (464)
T KOG0284|consen 156 GDKGGMIKYWQPNMN----------NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDD----GTIKIWDFRMPKE--ERVLR 219 (464)
T ss_pred cCCCceEEecccchh----------hhHHhhHhhhhhhheeccCCCCceeEEecCC----CeEEEEeccCCch--hheec
Confidence 223345666655431 111111111 111 1488855554433332 3466667655442 12333
Q ss_pred cCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEE
Q psy2521 415 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 415 ~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~ 494 (783)
.++ ..+-.-.|-+. +.|+++..+|. -|.+||+.+|+.+-.+....-+|.++.++++++-|. +. |-.. .+-.+
T Consensus 220 GHg-wdVksvdWHP~-kgLiasgskDn--lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Ll-t~-skD~--~~kv~ 291 (464)
T KOG0284|consen 220 GHG-WDVKSVDWHPT-KGLIASGSKDN--LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLL-TG-SKDQ--SCKVF 291 (464)
T ss_pred cCC-CCcceeccCCc-cceeEEccCCc--eeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeE-Ec-cCCc--eEEEE
Confidence 333 44333334444 78888888775 789999999987655554455677777888774443 22 2222 45566
Q ss_pred eC
Q psy2521 495 NI 496 (783)
Q Consensus 495 d~ 496 (783)
|+
T Consensus 292 Di 293 (464)
T KOG0284|consen 292 DI 293 (464)
T ss_pred eh
Confidence 66
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.99 Score=48.68 Aligned_cols=220 Identities=11% Similarity=0.109 Sum_probs=110.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..+.-||+|.+|+-+ ....+||+|.+.+|+.+..-... -..+-+.|+-||+.|+-...|
T Consensus 84 v~al~s~n~G~~l~ag-----~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskD-------------- 144 (476)
T KOG0646|consen 84 VHALASSNLGYFLLAG-----TISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKD-------------- 144 (476)
T ss_pred eeeeecCCCceEEEee-----cccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCC--------------
Confidence 5567889999988754 23467999999999876422111 122567899888766544422
Q ss_pred CCceEEEEEcCC---C----CCCceeEEecCCCCeeEEEEEEecCCcE-EEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 290 MGQKIYYHVLGT---E----QDKDIPVVEFPNGRSLGLHSEVTDCGRY-LLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 290 ~~~~v~~~~lgt---~----~~~d~~v~~~~~~~~~~~~~~~SpDGk~-l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
..|..|.+-. . ..+...+|.. +..-..++..++-|-- -+++++. ...+.++|+..|. .
T Consensus 145 --g~V~vW~l~~lv~a~~~~~~~p~~~f~~--HtlsITDl~ig~Gg~~~rl~TaS~---D~t~k~wdlS~g~--L----- 210 (476)
T KOG0646|consen 145 --GAVLVWLLTDLVSADNDHSVKPLHIFSD--HTLSITDLQIGSGGTNARLYTASE---DRTIKLWDLSLGV--L----- 210 (476)
T ss_pred --ccEEEEEEEeecccccCCCccceeeecc--CcceeEEEEecCCCccceEEEecC---CceEEEEEeccce--e-----
Confidence 1233333211 1 1111222221 1111234444444311 1233322 2567788887741 1
Q ss_pred CceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC--C------------CCcEEeecCCCCceEEEEEE
Q psy2521 362 PLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC--E------------KNWKTLIPEDENRTLDVVAA 427 (783)
Q Consensus 362 ~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~--~------------~~~~~li~~~~~~~l~~~~~ 427 (783)
...++.+..-..-.++|.+..+|+-+. .++|+..++.+-. . .+...++.+..+..+.-..+
T Consensus 211 -Llti~fp~si~av~lDpae~~~yiGt~----~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLai 285 (476)
T KOG0646|consen 211 -LLTITFPSSIKAVALDPAERVVYIGTE----EGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAI 285 (476)
T ss_pred -eEEEecCCcceeEEEcccccEEEecCC----cceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEE
Confidence 111222222122247787776665333 2345555543211 0 11233444443234444444
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeee
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHIS 470 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s 470 (783)
.-++.++++...+| ++.+||..+-+.++.+..-.|.|+.+.
T Consensus 286 s~DgtlLlSGd~dg--~VcvWdi~S~Q~iRtl~~~kgpVtnL~ 326 (476)
T KOG0646|consen 286 STDGTLLLSGDEDG--KVCVWDIYSKQCIRTLQTSKGPVTNLQ 326 (476)
T ss_pred ecCccEEEeeCCCC--CEEEEecchHHHHHHHhhhccccceeE
Confidence 44478888888875 788899865555566652234454433
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.19 Score=53.24 Aligned_cols=121 Identities=19% Similarity=0.156 Sum_probs=66.3
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-c--ccccccCeeEEeeCCC--EEEEEEeecCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-V--LKNVKFPSISWTHDHK--GFFYNQYCDINGTADG 283 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~--~~~~~~~~~~WspDg~--~l~y~~~~~~~~~~~g 283 (783)
-.+.++.|||||+.|++... + ..+||++++|..+.. + ..+..+....|+-|+. .++......+.+
T Consensus 187 ~eV~DL~FS~dgk~lasig~----d--~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~---- 256 (398)
T KOG0771|consen 187 AEVKDLDFSPDGKFLASIGA----D--SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGG---- 256 (398)
T ss_pred CccccceeCCCCcEEEEecC----C--ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCC----
Confidence 45889999999999998753 2 578999999965432 1 2233456777887762 222222111100
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.-+..++..++-+.--.-...+.. . .-..+..+|+||+++++...+ +.|-++++.+
T Consensus 257 ----~v~~~~~~~w~~~~~l~~~~~~~~--~--~siSsl~VS~dGkf~AlGT~d----GsVai~~~~~ 312 (398)
T KOG0771|consen 257 ----GVRLCDISLWSGSNFLRLRKKIKR--F--KSISSLAVSDDGKFLALGTMD----GSVAIYDAKS 312 (398)
T ss_pred ----ceeEEEeeeeccccccchhhhhhc--c--CcceeEEEcCCCcEEEEeccC----CcEEEEEece
Confidence 011112222221100000001111 1 124578999999999987654 4677777766
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.88 Score=46.97 Aligned_cols=148 Identities=14% Similarity=0.080 Sum_probs=79.6
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
.+.+++|..+++.... .....||+... ++....++.. ..+..++|++||...++.. +.... ..+.
T Consensus 29 ~AvS~dg~~~A~v~~~--~~~~~L~~~~~-~~~~~~~~~g--------~~l~~PS~d~~g~~W~v~~---~~~~~-~~~~ 93 (253)
T PF10647_consen 29 PAVSPDGSRVAAVSEG--DGGRSLYVGPA-GGPVRPVLTG--------GSLTRPSWDPDGWVWTVDD---GSGGV-RVVR 93 (253)
T ss_pred eEECCCCCeEEEEEEc--CCCCEEEEEcC-CCcceeeccC--------CccccccccCCCCEEEEEc---CCCce-EEEE
Confidence 4556788888887722 33466777654 3444444421 1478899999987655443 22212 2222
Q ss_pred ECCCCcccccc--ccc-c-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC-ceeEEe----
Q psy2521 241 DVDTGKDYPEV--LKN-V-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK-DIPVVE---- 311 (783)
Q Consensus 241 Dl~tg~~~~~~--~~~-~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~-d~~v~~---- 311 (783)
+..+|+..+.. ... . ....+.+||||.+++++..... ..+|++-.+-..... ...+..
T Consensus 94 ~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~-------------~~~v~va~V~r~~~g~~~~l~~~~~~ 160 (253)
T PF10647_consen 94 DSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGG-------------GGRVYVAGVVRDGDGVPRRLTGPRRV 160 (253)
T ss_pred ecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCC-------------CCeEEEEEEEeCCCCCcceeccceEe
Confidence 44444432211 111 1 4578999999999999985431 235665544322211 111100
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 312 FPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 312 ~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
.+....-...+.|+++++.+++...
T Consensus 161 ~~~~~~~v~~v~W~~~~~L~V~~~~ 185 (253)
T PF10647_consen 161 APPLLSDVTDVAWSDDSTLVVLGRS 185 (253)
T ss_pred cccccCcceeeeecCCCEEEEEeCC
Confidence 0010112357899999987776543
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.37 Score=49.12 Aligned_cols=208 Identities=17% Similarity=0.211 Sum_probs=109.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCC------------Cc-----ccccccc-cc-ccCeeEEeeCCCEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT------------GK-----DYPEVLK-NV-KFPSISWTHDHKGFFY 271 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t------------g~-----~~~~~~~-~~-~~~~~~WspDg~~l~y 271 (783)
....+|||||..+|- |+-...|.++|++- |. ++..|+- .+ ....+.|.|-.. |+.
T Consensus 115 cR~aafs~DG~lvAT-----GsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~-ILi 188 (430)
T KOG0640|consen 115 CRAAAFSPDGSLVAT-----GSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET-ILI 188 (430)
T ss_pred eeeeeeCCCCcEEEc-----cCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh-eEE
Confidence 346789999999884 44447899999861 11 0101110 00 124567777654 443
Q ss_pred EEeecCCCCCCCCcccccCCceEEEEEcCCCCC-CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 272 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 272 ~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
+.. +...|.+.+...... ....++++.. -...+.+.|.|.+|++. ++...+.++|+.
T Consensus 189 S~s---------------rD~tvKlFDfsK~saKrA~K~~qd~~---~vrsiSfHPsGefllvg----TdHp~~rlYdv~ 246 (430)
T KOG0640|consen 189 SGS---------------RDNTVKLFDFSKTSAKRAFKVFQDTE---PVRSISFHPSGEFLLVG----TDHPTLRLYDVN 246 (430)
T ss_pred ecc---------------CCCeEEEEecccHHHHHHHHHhhccc---eeeeEeecCCCceEEEe----cCCCceeEEecc
Confidence 332 233566666543322 2223455433 23578899999999864 455778888887
Q ss_pred CCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe
Q psy2521 351 SLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV 428 (783)
Q Consensus 351 ~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~ 428 (783)
+- +.+....|- .+...... ..++.| .||+....++ .|-.+|--+.. -.+.+-...++..+.+..+.
T Consensus 247 T~--QcfvsanPd----~qht~ai~~V~Ys~t~-~lYvTaSkDG---~IklwDGVS~r--Cv~t~~~AH~gsevcSa~Ft 314 (430)
T KOG0640|consen 247 TY--QCFVSANPD----DQHTGAITQVRYSSTG-SLYVTASKDG---AIKLWDGVSNR--CVRTIGNAHGGSEVCSAVFT 314 (430)
T ss_pred ce--eEeeecCcc----cccccceeEEEecCCc-cEEEEeccCC---cEEeeccccHH--HHHHHHhhcCCceeeeEEEc
Confidence 71 111000000 01111111 255554 5887766643 35556632211 12222222234555555666
Q ss_pred eCCEEEEEEecCCeeEEEEEECCCCceeeeec
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~ 460 (783)
++++.++++..| +-+++|.+.+|+.+.+.+
T Consensus 315 kn~kyiLsSG~D--S~vkLWEi~t~R~l~~Yt 344 (430)
T KOG0640|consen 315 KNGKYILSSGKD--STVKLWEISTGRMLKEYT 344 (430)
T ss_pred cCCeEEeecCCc--ceeeeeeecCCceEEEEe
Confidence 656666666555 567888887887665554
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=95.50 E-value=2.6 Score=46.43 Aligned_cols=105 Identities=13% Similarity=-0.009 Sum_probs=54.5
Q ss_pred ccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeec-----cCCCCCCCCCeEEEEEEECCCCcEEEEEEEEecCc
Q psy2521 475 YNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRET-----IVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGA 549 (783)
Q Consensus 475 ~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~ 549 (783)
-+.+-|.+.|..+-.++-.||+. -. .+.. +++ ..++. ............+..|...|+--..|.+.
T Consensus 430 ~~~v~YRfGSVGqDTqlcLWDlt-----eD--~L~~-~~p~~~~R~~~n~-~~pats~~a~s~a~gg~~~pg~~~~P~~~ 500 (636)
T KOG2394|consen 430 INSVTYRFGSVGQDTQLCLWDLT-----ED--VLVP-HPPLYRLRRHPNN-SSPATSPGAQSSAHGGEIGPGNTSVPGPC 500 (636)
T ss_pred ccceEEEeecccccceEEEEecc-----hh--hccc-CCchhhhhcCCCC-CCCccCcccchhcccCcccCCCccCCCCc
Confidence 34588889999999999999993 11 1111 010 11110 11111111211344555566654445544
Q ss_pred --CCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCC
Q psy2521 550 --LRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG 595 (783)
Q Consensus 550 --~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG 595 (783)
....+.|++=..+|++.......-.. ..||+.+..+=|-
T Consensus 501 ~r~~slp~s~i~~~ag~~~~~~~~~~~~-------s~~fs~lt~~~r~ 541 (636)
T KOG2394|consen 501 TRSASLPSSAISNRAGTPSVAGDGATAS-------SSGFSFLTSACRK 541 (636)
T ss_pred ccCCCCccccccccCCCCCccccccccc-------cccceeechhHhc
Confidence 23456677777677766554432111 1478877777663
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.52 Score=48.45 Aligned_cols=212 Identities=13% Similarity=0.124 Sum_probs=104.8
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEECCCCcccc--------ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 217 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP--------EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 217 SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~--------~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
-|+-.+.|.+.. ..-|++||.-||+... +....+ .++.|||||..||-.-.
T Consensus 120 qP~t~l~a~ssr-----~~PIh~wdaftG~lraSy~~ydh~de~taA--hsL~Fs~DGeqlfaGyk-------------- 178 (406)
T KOG2919|consen 120 QPSTNLFAVSSR-----DQPIHLWDAFTGKLRASYRAYDHQDEYTAA--HSLQFSPDGEQLFAGYK-------------- 178 (406)
T ss_pred CCccceeeeccc-----cCceeeeeccccccccchhhhhhHHhhhhh--eeEEecCCCCeEeeccc--------------
Confidence 367766665543 2459999999998542 222222 47899999999975431
Q ss_pred cCCceEEEEEcCCCCCCceeE----EecCC-CCeeEEEEEEecCC-cEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPV----VEFPN-GRSLGLHSEVTDCG-RYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v----~~~~~-~~~~~~~~~~SpDG-k~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
+.|...++..+ ..+-.+ +.... ......-+++||-. +.+++-+.. ....||-.+-..
T Consensus 179 ---rcirvFdt~Rp-Gr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~--q~~giy~~~~~~----------- 241 (406)
T KOG2919|consen 179 ---RCIRVFDTSRP-GRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG--QRVGIYNDDGRR----------- 241 (406)
T ss_pred ---ceEEEeeccCC-CCCCcchhhhhcccccccceeeeeeccCCCCcceeeeccc--ceeeeEecCCCC-----------
Confidence 12333333211 111111 11111 11233456677754 455543321 123344332211
Q ss_pred ceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCc--EEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 363 LKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW--KTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 363 ~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~--~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
+-.+..+..++.. .|-+||.+||.-+.. .-+|..+|+......-| ..-+... ...+. +.+...+.+++...
T Consensus 242 pl~llggh~gGvThL~~~edGn~lfsGaRk---~dkIl~WDiR~~~~pv~~L~rhv~~T-NQRI~-FDld~~~~~LasG~ 316 (406)
T KOG2919|consen 242 PLQLLGGHGGGVTHLQWCEDGNKLFSGARK---DDKILCWDIRYSRDPVYALERHVGDT-NQRIL-FDLDPKGEILASGD 316 (406)
T ss_pred ceeeecccCCCeeeEEeccCcCeecccccC---CCeEEEEeehhccchhhhhhhhccCc-cceEE-EecCCCCceeeccC
Confidence 2224445555543 599999988853332 23688899865321101 1111111 12222 22222245555554
Q ss_pred cCCeeEEEEEECCC-CceeeeecCC-CeEEEeeecccc
Q psy2521 439 QNVRSVMDLHDLNT-GKRLHSFPLD-LGQITHISGRRK 474 (783)
Q Consensus 439 ~~g~~~l~~~dl~~-G~~~~~l~~~-~g~v~~~s~~~d 474 (783)
.+| .|.+||+++ |..+. +..+ .-.+.+++.+|-
T Consensus 317 tdG--~V~vwdlk~~gn~~s-v~~~~sd~vNgvslnP~ 351 (406)
T KOG2919|consen 317 TDG--SVRVWDLKDLGNEVS-VTGNYSDTVNGVSLNPI 351 (406)
T ss_pred CCc--cEEEEecCCCCCccc-ccccccccccceecCcc
Confidence 444 688889865 65422 2222 445667777665
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.2 Score=52.12 Aligned_cols=158 Identities=11% Similarity=0.164 Sum_probs=95.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
++..+.++|-..-|.-+.. +| ..|.++|+.++.++.-.+-..+...++|+| ..+-|+.. +
T Consensus 189 ti~svkfNpvETsILas~~---sD-rsIvLyD~R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a--------------~ 248 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCA---SD-RSIVLYDLRQASPLKKVILTMRTNTICWNP--EAFNFVAA--------------N 248 (433)
T ss_pred ceeEEecCCCcchheeeec---cC-CceEEEecccCCccceeeeeccccceecCc--cccceeec--------------c
Confidence 4566778887776665442 22 469999999999887655555557899999 56777773 2
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
.++.+|.+++--- .....|+.+ ...-.+++.+||-|+-++-. +-...|.++....+....+ .. +..
T Consensus 249 ED~nlY~~DmR~l-~~p~~v~~d--hvsAV~dVdfsptG~Efvsg----syDksIRIf~~~~~~SRdi----Yh---tkR 314 (433)
T KOG0268|consen 249 EDHNLYTYDMRNL-SRPLNVHKD--HVSAVMDVDFSPTGQEFVSG----SYDKSIRIFPVNHGHSRDI----YH---TKR 314 (433)
T ss_pred ccccceehhhhhh-cccchhhcc--cceeEEEeccCCCcchhccc----cccceEEEeecCCCcchhh----hh---Hhh
Confidence 3457888876432 223334442 22335688999999987632 2225677777766421111 00 112
Q ss_pred ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCC
Q psy2521 370 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN 403 (783)
Q Consensus 370 ~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~ 403 (783)
...... .||.|.+.++ +..+..|-+||+....
T Consensus 315 Mq~V~~Vk~S~Dskyi~--SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 315 MQHVFCVKYSMDSKYII--SGSDDGNVRLWKAKAS 347 (433)
T ss_pred hheeeEEEEeccccEEE--ecCCCcceeeeecchh
Confidence 233334 4899877554 3334456778877653
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=95.36 E-value=1.5 Score=43.85 Aligned_cols=228 Identities=12% Similarity=0.134 Sum_probs=119.8
Q ss_pred eEEECC--CCcEEEEEEec----CCCceEEEEEEECCCCcccccc----ccccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 213 LYAFSD--NGKHFAYCLSK----SGSDWNTLHIKDVDTGKDYPEV----LKNVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 213 ~~~~SP--DG~~la~~~~~----~G~d~~~i~v~Dl~tg~~~~~~----~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
++.||| +++ ||.+... .|+ ..|+|.|+..++-+.+. ..+. .-.++||+...-++++...+
T Consensus 13 svqfSPf~~nr-LavAt~q~yGl~G~--G~L~ile~~~~~gi~e~~s~d~~D~-LfdV~Wse~~e~~~~~a~GD------ 82 (311)
T KOG0277|consen 13 SVQFSPFVENR-LAVATAQHYGLAGN--GRLFILEVTDPKGIQECQSYDTEDG-LFDVAWSENHENQVIAASGD------ 82 (311)
T ss_pred eeEecccccch-hheeehhhcccccC--ceEEEEecCCCCCeEEEEeeecccc-eeEeeecCCCcceEEEEecC------
Confidence 467787 444 4444322 344 57999999754433321 1122 24789999998888887432
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
..|.+++++-+ +..+.+|.+-... ..++.|++-.+++++++ +-..+-+||..+... .
T Consensus 83 ---------GSLrl~d~~~~-s~Pi~~~kEH~~E--V~Svdwn~~~r~~~lts-SWD~TiKLW~~~r~~----------S 139 (311)
T KOG0277|consen 83 ---------GSLRLFDLTMP-SKPIHKFKEHKRE--VYSVDWNTVRRRIFLTS-SWDGTIKLWDPNRPN----------S 139 (311)
T ss_pred ---------ceEEEeccCCC-CcchhHHHhhhhh--eEEeccccccceeEEee-ccCCceEeecCCCCc----------c
Confidence 25666775543 4455566654322 35788998888887765 322334555444332 0
Q ss_pred ceeeecCccc-eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 363 LKTVIPGMDH-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 363 ~~~l~~~~~~-~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..+ +.+... -+. .|+|.-.-++..+..+ +.+-.+|+..++. ...|+...-+.+.--+..-+..++++...|
T Consensus 140 v~T-f~gh~~~Iy~a~~sp~~~nlfas~Sgd---~~l~lwdvr~~gk---~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd 212 (311)
T KOG0277|consen 140 VQT-FNGHNSCIYQAAFSPHIPNLFASASGD---GTLRLWDVRSPGK---FMSIEAHNSEILCCDWSKYNHNVLATGGVD 212 (311)
T ss_pred eEe-ecCCccEEEEEecCCCCCCeEEEccCC---ceEEEEEecCCCc---eeEEEeccceeEeecccccCCcEEEecCCC
Confidence 222 233232 233 5888655555443332 2344455554431 222443323333322322225677766665
Q ss_pred CeeEEEEEECCCCc-eeeeecCCCeEEEeeeccccccEEEEEE
Q psy2521 441 VRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 441 g~~~l~~~dl~~G~-~~~~l~~~~g~v~~~s~~~d~~~l~~~~ 482 (783)
.-|+.||++.=+ .+.+|......|..+.++|....+..+.
T Consensus 213 --~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSa 253 (311)
T KOG0277|consen 213 --NLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASA 253 (311)
T ss_pred --ceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhc
Confidence 368889985322 2233333345566677777665555433
|
|
| >KOG2931|consensus | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.77 Score=47.06 Aligned_cols=130 Identities=12% Similarity=0.041 Sum_probs=81.8
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCcC-cHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTF-SISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~~-~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
.++..+.+.-|. |.+.++- + ++++.|+||..|.-.-.. ....| .+.+..++. + +.+.-+|..|.-.--.
T Consensus 22 ~~e~~V~T~~G~-v~V~V~G--d--~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~-~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYG--D--PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILE-H-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeecccccc-EEEEEec--C--CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHh-h-eEEEecCCCccccCCc
Confidence 445555555564 6666553 2 234678899888732221 22223 344555555 3 9999999998432111
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.+-. ..--.+.+|+.+.+..+.+. ..-+-|.-+|--+|+++-...|..+|++.-++|+..+
T Consensus 95 ~~p~----~y~yPsmd~LAd~l~~VL~~--f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 95 SFPE----GYPYPSMDDLADMLPEVLDH--FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred cCCC----CCCCCCHHHHHHHHHHHHHh--cCcceEEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 1111 11124567777777666654 3345789999999999999999999999999988765
|
|
| >PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.082 Score=59.06 Aligned_cols=139 Identities=14% Similarity=0.108 Sum_probs=76.6
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc-----------------HHHHHHHHcCCEEEEEecC
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS-----------------ISRCMFLRHFNGIYAIPNI 593 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~-----------------~~~~~~l~~~G~~v~~~~~ 593 (783)
+....+..+..+++..++ .....|+||++.||||.+...+.. ..-..|.. -..++.+|.
T Consensus 18 ~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~l~iD~ 93 (415)
T PF00450_consen 18 VNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK--FANLLFIDQ 93 (415)
T ss_dssp ECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEEEEE--
T ss_pred cCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc--ccceEEEee
Confidence 334466778887776655 346789999999999876432110 00123443 256777887
Q ss_pred CCCCCCChhHHhhccccCCcChHHHHHHHHHHH-HHcCCCCCCcEEEEEeChhHHHHHHHH----hcC------CCceeE
Q psy2521 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYM-INKKYTKPKYITIMGGSNGGLLVGACL----NQR------PELYGA 662 (783)
Q Consensus 594 RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l-~~~~~~d~~ri~i~G~S~GG~l~~~~~----~~~------p~lf~a 662 (783)
.-|.||...-........-....+|+..+++.. ..........+.|.|.||||..+-.++ .+. +=-+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 766666643222211112233445565555533 333334556899999999998765544 333 224799
Q ss_pred EEEcCCcchhh
Q psy2521 663 ALILVGALDML 673 (783)
Q Consensus 663 ~i~~~~~~d~~ 673 (783)
+++..|++|..
T Consensus 174 i~IGng~~dp~ 184 (415)
T PF00450_consen 174 IAIGNGWIDPR 184 (415)
T ss_dssp EEEESE-SBHH
T ss_pred ceecCcccccc
Confidence 99999988775
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A .... |
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=95.29 E-value=3.4 Score=40.92 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=82.3
Q ss_pred EEEEEecCCcEEEEEEecCCC-----CcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCC
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQ-----GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAP 393 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~-----~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~ 393 (783)
....++|||||..-......+ ..+||.+-+... ...+........ ..|+.|.+.+|+.-. -
T Consensus 112 NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~----------v~~i~~~v~IsNgl~Wd~d~K~fY~iDs---l 178 (310)
T KOG4499|consen 112 NDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQ----------VELIWNCVGISNGLAWDSDAKKFYYIDS---L 178 (310)
T ss_pred ccCccCCCCceeeeeeccccccccccccEEEEeccCCC----------ceeeehhccCCccccccccCcEEEEEcc---C
Confidence 356789999995443332211 156676655441 111111111111 148888888998643 3
Q ss_pred CceE--EEEcCCCCCCCCcEEeecCCC----Cce-EEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEE
Q psy2521 394 KGKV--VTINLNNPCEKNWKTLIPEDE----NRT-LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQI 466 (783)
Q Consensus 394 ~~~L--~~~d~~~~~~~~~~~li~~~~----~~~-l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v 466 (783)
++.+ |-+|..++...+-+.++.-.. +.. -.++.+...+.|++..-.. +.|+.+|+.+||.+.++.+|.-.+
T Consensus 179 n~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng--~~V~~~dp~tGK~L~eiklPt~qi 256 (310)
T KOG4499|consen 179 NYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNG--GTVQKVDPTTGKILLEIKLPTPQI 256 (310)
T ss_pred ceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecC--cEEEEECCCCCcEEEEEEcCCCce
Confidence 5667 444566655443333332221 111 1223333346677666555 478999999999999998883333
Q ss_pred Eeee-ccccccEEEEEEec-CCCCce
Q psy2521 467 THIS-GRRKYNEVFYGFTS-FLQPGT 490 (783)
Q Consensus 467 ~~~s-~~~d~~~l~~~~ss-~~~P~~ 490 (783)
++.. +-+.-+.++++... +..|.+
T Consensus 257 tsccFgGkn~d~~yvT~aa~~~dp~~ 282 (310)
T KOG4499|consen 257 TSCCFGGKNLDILYVTTAAKFDDPVR 282 (310)
T ss_pred EEEEecCCCccEEEEEehhcccCchh
Confidence 3221 12333556655443 444443
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=95.28 E-value=3.8 Score=46.23 Aligned_cols=57 Identities=19% Similarity=0.294 Sum_probs=43.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEE
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~ 273 (783)
.+.++++-|||..|..... ..++++|+..|..++ ++.+. ...-++||.||++|+-..
T Consensus 14 ci~d~afkPDGsqL~lAAg------~rlliyD~ndG~llq-tLKgHKDtVycVAys~dGkrFASG~ 72 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG------SRLLVYDTSDGTLLQ-PLKGHKDTVYCVAYAKDGKRFASGS 72 (1081)
T ss_pred chheeEECCCCceEEEecC------CEEEEEeCCCccccc-ccccccceEEEEEEccCCceeccCC
Confidence 5788999999999988763 469999999887665 33222 235789999999887544
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.83 Score=48.61 Aligned_cols=58 Identities=17% Similarity=0.162 Sum_probs=40.5
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEe
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~ 274 (783)
.-+++++||..||-. .....++|++...-.... +.......-.+.|||||+.|+++..
T Consensus 148 k~vaf~~~gs~latg-----g~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~ 206 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATG-----GTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGA 206 (398)
T ss_pred eEEEEcCCCCEeeec-----cccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecC
Confidence 458999999999853 344789999965544322 2222223358899999999999983
|
|
| >PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids [] | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.068 Score=53.50 Aligned_cols=89 Identities=13% Similarity=0.115 Sum_probs=45.7
Q ss_pred EEEecCCCCCccCCcCcHHHHHHHHcCCEE---EEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 558 IIYGYGGYGVSVLPTFSISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 558 ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
||++||-.+. ....|......|. ++||. +...+|-..... ....... ........+.+.++.+.+ ++..
T Consensus 4 VVlVHG~~~~-~~~~w~~~~~~l~-~~GY~~~~vya~tyg~~~~~--~~~~~~~--~~~~~~~~l~~fI~~Vl~--~TGa 75 (219)
T PF01674_consen 4 VVLVHGTGGN-AYSNWSTLAPYLK-AAGYCDSEVYALTYGSGNGS--PSVQNAH--MSCESAKQLRAFIDAVLA--YTGA 75 (219)
T ss_dssp EEEE--TTTT-TCGGCCHHHHHHH-HTT--CCCEEEE--S-CCHH--THHHHHH--B-HHHHHHHHHHHHHHHH--HHT-
T ss_pred EEEECCCCcc-hhhCHHHHHHHHH-HcCCCcceeEeccCCCCCCC--Ccccccc--cchhhHHHHHHHHHHHHH--hhCC
Confidence 6778997542 2344665554554 46999 788888543221 1111111 111223455555555554 3666
Q ss_pred CcEEEEEeChhHHHHHHHHhc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~ 655 (783)
||=|+|||+||.++-+++.-
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999888753
|
This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A .... |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=95.15 E-value=1.5 Score=44.84 Aligned_cols=201 Identities=15% Similarity=0.129 Sum_probs=93.5
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
++++|.||+++||.+.. .+..|+..++.... -...-+.... -.-++.+..+|++++.. .
T Consensus 25 SGLTy~pd~~tLfaV~d---------------~~~~i~els~~G~v-lr~i~l~g~~---D~EgI~y~g~~~~vl~~-E- 83 (248)
T PF06977_consen 25 SGLTYNPDTGTLFAVQD---------------EPGEIYELSLDGKV-LRRIPLDGFG---DYEGITYLGNGRYVLSE-E- 83 (248)
T ss_dssp EEEEEETTTTEEEEEET---------------TTTEEEEEETT--E-EEEEE-SS-S---SEEEEEE-STTEEEEEE-T-
T ss_pred cccEEcCCCCeEEEEEC---------------CCCEEEEEcCCCCE-EEEEeCCCCC---CceeEEEECCCEEEEEE-c-
Confidence 79999999999887771 24467766653221 1111122111 13578888888776632 1
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeee---c-CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVI---P-GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK 411 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~-~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~ 411 (783)
....|+++++... ...+. ......+. . ..+.+.+ .|++.+++|++...+ .| ..|+.++..... ....
T Consensus 84 --r~~~L~~~~~~~~-~~~~~-~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~-~P-~~l~~~~~~~~~-~~~~ 156 (248)
T PF06977_consen 84 --RDQRLYIFTIDDD-TTSLD-RADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER-KP-KRLYEVNGFPGG-FDLF 156 (248)
T ss_dssp --TTTEEEEEEE-----TT---EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES-SS-EEEEEEESTT-S-S--E
T ss_pred --CCCcEEEEEEecc-ccccc-hhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC-CC-hhhEEEccccCc-ccee
Confidence 2367888877441 11110 00011111 1 1223344 588989999987554 33 458888762111 0011
Q ss_pred Eee----cCC--CCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecCCC---------eEEEeeeccccc
Q psy2521 412 TLI----PED--ENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDL---------GQITHISGRRKY 475 (783)
Q Consensus 412 ~li----~~~--~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~---------g~v~~~s~~~d~ 475 (783)
... ... .-..+.++... ..++|++.+.+. ..|..+|. +|+.+..+.+.. -...+++.++++
T Consensus 157 ~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es--~~l~~~d~-~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G 233 (248)
T PF06977_consen 157 VSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES--RLLLELDR-QGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG 233 (248)
T ss_dssp EEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT--TEEEEE-T-T--EEEEEE-STTGGG-SS---SEEEEEE-TT-
T ss_pred eccccccccccceeccccceEEcCCCCeEEEEECCC--CeEEEECC-CCCEEEEEEeCCcccCcccccCCccEEEECCCC
Confidence 110 000 01113333332 235777776554 46788886 788665555432 124556666655
Q ss_pred cEEEEEEecCCCCceEEEE
Q psy2521 476 NEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 476 ~~l~~~~ss~~~P~~vy~~ 494 (783)
.+|++- .|...|++
T Consensus 234 -~LYIvs----EpNlfy~f 247 (248)
T PF06977_consen 234 -NLYIVS----EPNLFYRF 247 (248)
T ss_dssp --EEEEE----TTTEEEEE
T ss_pred -CEEEEc----CCceEEEe
Confidence 566543 36677765
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=95.14 E-value=3 Score=42.53 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=105.5
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc--cc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~--~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+++++|--++-++....-|. .-+++|..+++..... .+ ..-++.=.|||||+.||-+.++- + .+
T Consensus 72 gi~~~p~~~ravafARrPGt---f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndf-d---------~~ 138 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGT---FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDF-D---------PN 138 (366)
T ss_pred CeecCCCCcceEEEEecCCc---eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCC-C---------CC
Confidence 47888876665555555564 4689999888654321 12 22345668999998776554322 1 11
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEe---cCCC-----------CcEEEEEECCCCCCC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS---NNTQ-----------GSDLHYFDLHSLPDG 355 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~---~~~~-----------~~~l~~~dl~~g~~~ 355 (783)
+ .-|-+++....- + .+-+.+....--..+.|.+||+.|++... ...+ ...+-++|..+|.
T Consensus 139 r-GViGvYd~r~~f-q--rvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~-- 212 (366)
T COG3490 139 R-GVIGVYDAREGF-Q--RVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGN-- 212 (366)
T ss_pred C-ceEEEEeccccc-c--eecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccc--
Confidence 1 122222322111 1 11111110000135679999999987643 0001 1346677755541
Q ss_pred cccCCCCceeeec-CccceeE--EEEeeCCEEEEEECCCCCC---ceEEEEcCCCCCCCCcEEeecCCC------CceEE
Q psy2521 356 KISGKFPLKTVIP-GMDHHHE--IIANNGPELIVKTTKNAPK---GKVVTINLNNPCEKNWKTLIPEDE------NRTLD 423 (783)
Q Consensus 356 ~l~~~~~~~~l~~-~~~~~~~--~~s~dg~~l~~~t~~~~~~---~~L~~~d~~~~~~~~~~~li~~~~------~~~l~ 423 (783)
.+ ....+.. ...-+.. ....|| +++|-....++. -.|+..-..+.. .+ .++-.+ .+.+.
T Consensus 213 li----ekh~Lp~~l~~lSiRHld~g~dg-tvwfgcQy~G~~~d~ppLvg~~~~g~~---l~-~~~~pee~~~~~anYig 283 (366)
T COG3490 213 LI----EKHTLPASLRQLSIRHLDIGRDG-TVWFGCQYRGPRNDLPPLVGHFRKGEP---LE-FLDLPEEQTAAFANYIG 283 (366)
T ss_pred hh----hhccCchhhhhcceeeeeeCCCC-cEEEEEEeeCCCccCCcceeeccCCCc---Cc-ccCCCHHHHHHHHhhhh
Confidence 11 1111110 0111111 244554 566655433222 123333333322 11 111111 12334
Q ss_pred EEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 424 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 424 ~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
++...+...++......| +...+||.++|..+.+.+++
T Consensus 284 siA~n~~~glV~lTSP~G-N~~vi~da~tG~vv~~a~l~ 321 (366)
T COG3490 284 SIAANRRDGLVALTSPRG-NRAVIWDAATGAVVSEAALP 321 (366)
T ss_pred heeecccCCeEEEecCCC-CeEEEEEcCCCcEEeccccc
Confidence 455554355665555555 46788999999987766666
|
|
| >PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.093 Score=53.40 Aligned_cols=113 Identities=12% Similarity=0.054 Sum_probs=64.6
Q ss_pred CCccEEEEecCCCCCccCCc-Cc-HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPT-FS-ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~-~~-~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
....++||+||... +.... +. .++...+.-.| .++.+.....|.. ..|..+ ...-...-.++...++.|.+.
T Consensus 16 ~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~-~~i~FsWPS~g~~-~~Y~~d--~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPG-VVILFSWPSDGSL-LGYFYD--RESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCc-eEEEEEcCCCCCh-hhhhhh--hhhHHHHHHHHHHHHHHHHhc-
Confidence 46789999999533 32211 11 11222232223 7888887765532 122221 111122345555666666554
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcC----C-----CceeEEEEcCCcchh
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQR----P-----ELYGAALILVGALDM 672 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~----p-----~lf~a~i~~~~~~d~ 672 (783)
....+|-|++||||+.+++.++.+- + ..|..+|..+|-+|.
T Consensus 90 -~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 -PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred -cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 3457999999999999999887552 1 256677777776654
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.065 Score=61.25 Aligned_cols=61 Identities=16% Similarity=0.166 Sum_probs=45.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEee
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~ 275 (783)
.+.+++||||||||+-+..+ .+|++||+.||..+.-..-..--.++++||.|+.|+-+..+
T Consensus 578 ritd~~FS~DgrWlisasmD-----~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMD-----STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred ceeeeEeCCCCcEEEEeecC-----CcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEec
Confidence 47889999999999876543 57999999999876422222222589999999999877643
|
|
| >PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics [] | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.11 Score=52.50 Aligned_cols=85 Identities=14% Similarity=0.031 Sum_probs=52.2
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKYTKP 634 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~~~d~ 634 (783)
+.|+++|++.|... .|. .+...|...++.|..+..+|-+. ......+++++++. ++.+.+... .
T Consensus 1 ~~lf~~p~~gG~~~--~y~-~la~~l~~~~~~v~~i~~~~~~~----------~~~~~~si~~la~~y~~~I~~~~~--~ 65 (229)
T PF00975_consen 1 RPLFCFPPAGGSAS--SYR-PLARALPDDVIGVYGIEYPGRGD----------DEPPPDSIEELASRYAEAIRARQP--E 65 (229)
T ss_dssp -EEEEESSTTCSGG--GGH-HHHHHHTTTEEEEEEECSTTSCT----------TSHEESSHHHHHHHHHHHHHHHTS--S
T ss_pred CeEEEEcCCccCHH--HHH-HHHHhCCCCeEEEEEEecCCCCC----------CCCCCCCHHHHHHHHHHHhhhhCC--C
Confidence 36888999877443 243 34566653258888889888431 11122335554443 333333221 1
Q ss_pred CcEEEEEeChhHHHHHHHHhc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~ 655 (783)
..+.|+|||+||.++..+|.+
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHHH
Confidence 289999999999999988754
|
Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A .... |
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=94.96 E-value=4.7 Score=40.77 Aligned_cols=188 Identities=9% Similarity=0.052 Sum_probs=92.8
Q ss_pred CeeEEeeC-CCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC-CceeEEecCCCCeeEEEEEEecCCcEEEEEE
Q psy2521 258 PSISWTHD-HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVST 335 (783)
Q Consensus 258 ~~~~WspD-g~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~ 335 (783)
-.++|.|- |. |+++... ...|..+.++.+.. .-+.+..+.. .....+++|||.|++|+-.+
T Consensus 18 W~~awhp~~g~-ilAscg~---------------Dk~vriw~~~~~~s~~ck~vld~~h-krsVRsvAwsp~g~~La~aS 80 (312)
T KOG0645|consen 18 WSVAWHPGKGV-ILASCGT---------------DKAVRIWSTSSGDSWTCKTVLDDGH-KRSVRSVAWSPHGRYLASAS 80 (312)
T ss_pred EEEEeccCCce-EEEeecC---------------CceEEEEecCCCCcEEEEEeccccc-hheeeeeeecCCCcEEEEee
Confidence 58999987 54 5555522 33677777664211 1111222222 23456899999999988654
Q ss_pred ecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe
Q psy2521 336 SNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413 (783)
Q Consensus 336 ~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l 413 (783)
-+. +.-||-- .++ ...-...+.+.+.... .|+.+|..|..-+ |+. .++.+.++..+.-....+
T Consensus 81 FD~--t~~Iw~k--~~~-------efecv~~lEGHEnEVK~Vaws~sG~~LATCS-RDK---SVWiWe~deddEfec~aV 145 (312)
T KOG0645|consen 81 FDA--TVVIWKK--EDG-------EFECVATLEGHENEVKCVAWSASGNYLATCS-RDK---SVWIWEIDEDDEFECIAV 145 (312)
T ss_pred ccc--eEEEeec--CCC-------ceeEEeeeeccccceeEEEEcCCCCEEEEee-CCC---eEEEEEecCCCcEEEEee
Confidence 332 1233322 121 1112333445554443 5999998877543 432 355555543332122233
Q ss_pred ecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCc--eeeeecCCCeEEEeeeccccccEEE
Q psy2521 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK--RLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 414 i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~--~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
+.+.-..+=.-++-+. ..|+++..=|..-++|.-+. ++. ....|.....+|-.+..++.+.++.
T Consensus 146 L~~HtqDVK~V~WHPt-~dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~ 211 (312)
T KOG0645|consen 146 LQEHTQDVKHVIWHPT-EDLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLV 211 (312)
T ss_pred eccccccccEEEEcCC-cceeEEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCceEE
Confidence 3332122222334443 56777766554344444332 333 2344544445665666666665544
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=94.89 E-value=3.1 Score=43.63 Aligned_cols=242 Identities=11% Similarity=0.057 Sum_probs=123.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.++..+-+.|+--.++-+ ++.++|+++|..||+... .+.+. ....++++.-|+.++-.+.+
T Consensus 109 ~~vt~v~~hp~~~~v~~a-----s~d~tikv~D~~tg~~e~-~LrGHt~sv~di~~~a~Gk~l~tcSsD----------- 171 (406)
T KOG0295|consen 109 SSVTRVIFHPSEALVVSA-----SEDATIKVFDTETGELER-SLRGHTDSVFDISFDASGKYLATCSSD----------- 171 (406)
T ss_pred cceeeeeeccCceEEEEe-----cCCceEEEEEccchhhhh-hhhccccceeEEEEecCccEEEecCCc-----------
Confidence 456667777776655443 244789999999998743 22221 12467777777766655422
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.+ +.+++.++-...-.... ..+ .....+.+-|-|.+|+-. + ..+.|..+++++|-.. . .
T Consensus 172 ---l~--~~LWd~~~~~~c~ks~~-gh~--h~vS~V~f~P~gd~ilS~-s---rD~tik~We~~tg~cv--------~-t 230 (406)
T KOG0295|consen 172 ---LS--AKLWDFDTFFRCIKSLI-GHE--HGVSSVFFLPLGDHILSC-S---RDNTIKAWECDTGYCV--------K-T 230 (406)
T ss_pred ---cc--hhheeHHHHHHHHHHhc-Ccc--cceeeEEEEecCCeeeec-c---cccceeEEecccceeE--------E-e
Confidence 11 44555554221111111 111 123456777888887622 1 2267888888885321 1 1
Q ss_pred ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC-------CCCc---EEeecCCCCceEEE-EEEeeCCEEEE
Q psy2521 367 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC-------EKNW---KTLIPEDENRTLDV-VAAVANNKLIV 435 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~-------~~~~---~~li~~~~~~~l~~-~~~~~g~~l~~ 435 (783)
+.+...-+..+.+.++..++.+-.+... |-.+-+++.+ .+.. ....|+.....+.. ....++..+.+
T Consensus 231 ~~~h~ewvr~v~v~~DGti~As~s~dqt--l~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~ 308 (406)
T KOG0295|consen 231 FPGHSEWVRMVRVNQDGTIIASCSNDQT--LRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLG 308 (406)
T ss_pred ccCchHhEEEEEecCCeeEEEecCCCce--EEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEE
Confidence 1121212223444444444433322222 3333333321 0001 11222221000111 11112235666
Q ss_pred EEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 436 HYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
...+|+ .|..||+.+|+-+-+|....-.|.++..+|.|+.++ +. ..-.++..||+
T Consensus 309 s~SrDk--tIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~-Sc---aDDktlrvwdl 363 (406)
T KOG0295|consen 309 SGSRDK--TIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL-SC---ADDKTLRVWDL 363 (406)
T ss_pred eecccc--eEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE-EE---ecCCcEEEEEe
Confidence 666664 578889988987666655545577888888876555 33 33457888888
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=94.88 E-value=3.1 Score=42.58 Aligned_cols=206 Identities=10% Similarity=0.076 Sum_probs=98.9
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+++++|.||.+.|+.+.+.. ..|+.++++ |+.+.. .+.+ .++.++++..++ .++.+.
T Consensus 24 ~SGLTy~pd~~tLfaV~d~~----~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~-~~vl~~--------------- 82 (248)
T PF06977_consen 24 LSGLTYNPDTGTLFAVQDEP----GEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNG-RYVLSE--------------- 82 (248)
T ss_dssp EEEEEEETTTTEEEEEETTT----TEEEEEETT---EEEEEE-SS-SSEEEEEE-STT-EEEEEE---------------
T ss_pred ccccEEcCCCCeEEEEECCC----CEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCC-EEEEEE---------------
Confidence 89999999999887776653 458899985 565442 2332 344678887555 344333
Q ss_pred cCCceEEEEEcCCCCCC----ceeEE--ecC--CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC-cccC
Q psy2521 289 HMGQKIYYHVLGTEQDK----DIPVV--EFP--NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG-KISG 359 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~----d~~v~--~~~--~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~-~l~~ 359 (783)
.+.++|+.+.++..... +..-+ ..+ .+. -+-+++|+|.++.+++...+ ....||-++...+... ....
T Consensus 83 Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~-G~EGla~D~~~~~L~v~kE~--~P~~l~~~~~~~~~~~~~~~~ 159 (248)
T PF06977_consen 83 ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNK-GFEGLAYDPKTNRLFVAKER--KPKRLYEVNGFPGGFDLFVSD 159 (248)
T ss_dssp TTTTEEEEEEE----TT--EEEEEEEE---S---SS---EEEEEETTTTEEEEEEES--SSEEEEEEESTT-SS--EEEE
T ss_pred cCCCcEEEEEEeccccccchhhceEEecccccCCCc-ceEEEEEcCCCCEEEEEeCC--CChhhEEEccccCccceeecc
Confidence 23457888877443211 10111 111 222 24689999998888766433 3467787776211000 0000
Q ss_pred CCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-----CCceEEEEEEeeCCE
Q psy2521 360 KFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-----ENRTLDVVAAVANNK 432 (783)
Q Consensus 360 ~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-----~~~~l~~~~~~~g~~ 432 (783)
..++.. ....-.+.+ .+.|..++||++++. ...|+.+|.++.- .....|.... .-.--+++.+.+++.
T Consensus 160 ~~~~~~-~~~~~~d~S~l~~~p~t~~lliLS~e---s~~l~~~d~~G~~-~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~ 234 (248)
T PF06977_consen 160 DQDLDD-DKLFVRDLSGLSYDPRTGHLLILSDE---SRLLLELDRQGRV-VSSLSLDRGFHGLSKDIPQPEGIAFDPDGN 234 (248)
T ss_dssp -HHHH--HT--SS---EEEEETTTTEEEEEETT---TTEEEEE-TT--E-EEEEE-STTGGG-SS---SEEEEEE-TT--
T ss_pred cccccc-ccceeccccceEEcCCCCeEEEEECC---CCeEEEECCCCCE-EEEEEeCCcccCcccccCCccEEEECCCCC
Confidence 000000 000011112 367888899999876 3468888865431 1122232211 011245677766677
Q ss_pred EEEEEecCCeeEEEEE
Q psy2521 433 LIVHYIQNVRSVMDLH 448 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~ 448 (783)
||+....+ ..|++
T Consensus 235 LYIvsEpN---lfy~f 247 (248)
T PF06977_consen 235 LYIVSEPN---LFYRF 247 (248)
T ss_dssp EEEEETTT---EEEEE
T ss_pred EEEEcCCc---eEEEe
Confidence 88776543 44544
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=94.80 E-value=4.2 Score=42.12 Aligned_cols=155 Identities=12% Similarity=0.078 Sum_probs=80.2
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce-eeecCc---cceeE--EEEeeCCEEEEEECCCCC
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGM---DHHHE--IIANNGPELIVKTTKNAP 393 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~-~l~~~~---~~~~~--~~s~dg~~l~~~t~~~~~ 393 (783)
.++.+||||.+|+.- ..+-|.+.|+.. +.. +-+.. .+..+. .+-.. .++|-....+-...- +.
T Consensus 162 hsL~Fs~DGeqlfaG-----ykrcirvFdt~R-pGr----~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY-~q 230 (406)
T KOG2919|consen 162 HSLQFSPDGEQLFAG-----YKRCIRVFDTSR-PGR----DCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSY-GQ 230 (406)
T ss_pred eeEEecCCCCeEeec-----ccceEEEeeccC-CCC----CCcchhhhhcccccccceeeeeeccCCCCcceeeecc-cc
Confidence 578999999999732 336788888843 111 11111 112211 11112 366655444433322 12
Q ss_pred CceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCC-ceeeeecCCC----eEEEe
Q psy2521 394 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG-KRLHSFPLDL----GQITH 468 (783)
Q Consensus 394 ~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G-~~~~~l~~~~----g~v~~ 468 (783)
...||.-+-..+ ...+-.+. +.+..-.+-.+|++|+.-.+.+ ..|-.||+..- ..+-.|.-.. -.| .
T Consensus 231 ~~giy~~~~~~p----l~llggh~-gGvThL~~~edGn~lfsGaRk~--dkIl~WDiR~~~~pv~~L~rhv~~TNQRI-~ 302 (406)
T KOG2919|consen 231 RVGIYNDDGRRP----LQLLGGHG-GGVTHLQWCEDGNKLFSGARKD--DKILCWDIRYSRDPVYALERHVGDTNQRI-L 302 (406)
T ss_pred eeeeEecCCCCc----eeeecccC-CCeeeEEeccCcCeecccccCC--CeEEEEeehhccchhhhhhhhccCccceE-E
Confidence 344665543222 33333333 4444444556678888776665 57888998432 2222221111 123 5
Q ss_pred eeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 469 ISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 469 ~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
|...+++..+. |-.+-+.|.+||++
T Consensus 303 FDld~~~~~La----sG~tdG~V~vwdlk 327 (406)
T KOG2919|consen 303 FDLDPKGEILA----SGDTDGSVRVWDLK 327 (406)
T ss_pred EecCCCCceee----ccCCCccEEEEecC
Confidence 66677766554 45566778888883
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=94.80 E-value=1.6 Score=49.95 Aligned_cols=150 Identities=15% Similarity=0.160 Sum_probs=77.3
Q ss_pred EEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEE
Q psy2521 321 HSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTI 400 (783)
Q Consensus 321 ~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~ 400 (783)
.+.++|||++++++.........+..++... .++...+.- . ....+..+|+..++ + ..+|..+
T Consensus 239 ~v~~spdGk~afvTsyNsE~G~tl~em~a~e---------~d~~vvfni-~-~iea~vkdGK~~~V--~----gn~V~VI 301 (635)
T PRK02888 239 NVDTDYDGKYAFSTCYNSEEGVTLAEMMAAE---------RDWVVVFNI-A-RIEEAVKAGKFKTI--G----GSKVPVV 301 (635)
T ss_pred cceECCCCCEEEEeccCcccCcceeeecccc---------CceEEEEch-H-HHHHhhhCCCEEEE--C----CCEEEEE
Confidence 5788999999988864322235566665543 112212211 1 11235568887775 1 2358888
Q ss_pred cCCCCC--CCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce------------eeeecCCCeEE
Q psy2521 401 NLNNPC--EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR------------LHSFPLDLGQI 466 (783)
Q Consensus 401 d~~~~~--~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~------------~~~l~~~~g~v 466 (783)
|..+.. .......+|-+ ...-.-..+++|+++++...- .+.+.++|+++-+. +.++.+..|-+
T Consensus 302 D~~t~~~~~~~v~~yIPVG-KsPHGV~vSPDGkylyVankl--S~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlGPL 378 (635)
T PRK02888 302 DGRKAANAGSALTRYVPVP-KNPHGVNTSPDGKYFIANGKL--SPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLGPL 378 (635)
T ss_pred ECCccccCCcceEEEEECC-CCccceEECCCCCEEEEeCCC--CCcEEEEEChhhhhhhhccCCccceEEEeeccCCCcc
Confidence 876510 01244555544 222222244565677765543 35688888854331 23333332322
Q ss_pred -EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 467 -THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 467 -~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..| +.++. .|+|.-.-.++.+||+
T Consensus 379 HTaF--Dg~G~----aytslf~dsqv~kwn~ 403 (635)
T PRK02888 379 HTAF--DGRGN----AYTTLFLDSQIVKWNI 403 (635)
T ss_pred eEEE--CCCCC----EEEeEeecceeEEEeh
Confidence 133 33432 3345445568889998
|
|
| >PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.028 Score=49.14 Aligned_cols=49 Identities=31% Similarity=0.307 Sum_probs=39.2
Q ss_pred CcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhh
Q psy2521 719 PATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 719 P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~ 778 (783)
+|+|++.+++|+.+|+..+.++.++|... .+++.++.||+.....+..+
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-----------~lvt~~g~gHg~~~~~s~C~ 83 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPGS-----------RLVTVDGAGHGVYAGGSPCV 83 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCCc-----------eEEEEeccCcceecCCChHH
Confidence 45999999999999999999999888644 67888899999764333333
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity |
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=94.77 E-value=3.6 Score=45.29 Aligned_cols=111 Identities=13% Similarity=0.151 Sum_probs=65.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc--ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
-++..-.|||||.-|.-+ | |...|.+|.-. |- +.-+ ........++|.|++..++|+..+
T Consensus 105 ~A~~~gRW~~dGtgLlt~----G-EDG~iKiWSrs-GM-LRStl~Q~~~~v~c~~W~p~S~~vl~c~g~----------- 166 (737)
T KOG1524|consen 105 AAISSGRWSPDGAGLLTA----G-EDGVIKIWSRS-GM-LRSTVVQNEESIRCARWAPNSNSIVFCQGG----------- 166 (737)
T ss_pred hhhhhcccCCCCceeeee----c-CCceEEEEecc-ch-HHHHHhhcCceeEEEEECCCCCceEEecCC-----------
Confidence 345667899999876532 2 33568888754 32 2212 122233578999999999999821
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.++...|... . .++-+.. +.+....+.|++...-|+ .+.+.-+.-++|..+
T Consensus 167 ------h~~IKpL~~n-~-k~i~WkA--HDGiiL~~~W~~~s~lI~----sgGED~kfKvWD~~G 217 (737)
T KOG1524|consen 167 ------HISIKPLAAN-S-KIIRWRA--HDGLVLSLSWSTQSNIIA----SGGEDFRFKIWDAQG 217 (737)
T ss_pred ------eEEEeecccc-c-ceeEEec--cCcEEEEeecCcccccee----ecCCceeEEeecccC
Confidence 4555555432 1 1222332 234567889999887665 223335566677655
|
|
| >PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants | Back alignment and domain information |
|---|
Probab=94.63 E-value=1.4 Score=44.53 Aligned_cols=180 Identities=14% Similarity=0.063 Sum_probs=95.0
Q ss_pred EEEEecCCCCCccCCcCcH-HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCC
Q psy2521 557 VIIYGYGGYGVSVLPTFSI-SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 635 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 635 (783)
.||++-||......|.-.. ..+..|+++||+|++.-|.-+ +- |... .......|..+++.|.+.+..++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t--fD---H~~~----A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT--FD---HQAI----AREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC--Cc---HHHH----HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 6777777755544454322 245556678999999988742 22 2211 112345677788888776544433
Q ss_pred --cEEEEEeChhHHHHHHHHhcCCCcee--EEEEcC--CcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCC
Q psy2521 636 --YITIMGGSNGGLLVGACLNQRPELYG--AALILV--GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 636 --ri~i~G~S~GG~l~~~~~~~~p~lf~--a~i~~~--~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v 709 (783)
.+.-+|||+|+.+-+.+....+.--+ ++|+.. |+.+-+.+.. ........|| .|.-.|..+.++.+ ..+
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN~~a~~aIP~~~-~l~~~l~~EF-~PsP~ET~~li~~~---Y~~ 163 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNNFPADEAIPLLE-QLAPALRLEF-TPSPEETRRLIRES---YQV 163 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEecCChHHHhhCchHh-hhccccccCc-cCCHHHHHHHHHHh---cCC
Confidence 57779999999998877655432212 222221 1111111100 0001111222 23333444444432 234
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
+. .|++-=.+|.. .|+..+.+.|+... ..-+....-+ +.|-
T Consensus 164 ~r---------nLLIkF~~D~i---Dqt~~L~~~L~~r~------~~~~~~~~L~-G~HL 204 (250)
T PF07082_consen 164 RR---------NLLIKFNDDDI---DQTDELEQILQQRF------PDMVSIQTLP-GNHL 204 (250)
T ss_pred cc---------ceEEEecCCCc---cchHHHHHHHhhhc------cccceEEeCC-CCCC
Confidence 43 56666566654 68999999998761 1224555555 4674
|
Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis. |
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.15 Score=58.38 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=65.8
Q ss_pred ceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 233 DWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 233 d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
+...|.++|+.|.++.++-- ...+...++||||||+|+-.+.| ..|..|++-++.--|.+..+
T Consensus 554 ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD----------------~tIr~wDlpt~~lID~~~vd 617 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMD----------------STIRTWDLPTGTLIDGLLVD 617 (910)
T ss_pred CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecC----------------CcEEEEeccCcceeeeEecC
Confidence 35789999999887765433 23345789999999999987743 36889999887655655554
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE
Q psy2521 312 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 312 ~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d 348 (783)
.+ ..++.+||.|.+|+-.-. +.+.||++-
T Consensus 618 ~~-----~~sls~SPngD~LAT~Hv---d~~gIylWs 646 (910)
T KOG1539|consen 618 SP-----CTSLSFSPNGDFLATVHV---DQNGIYLWS 646 (910)
T ss_pred Cc-----ceeeEECCCCCEEEEEEe---cCceEEEEE
Confidence 33 256889999999985532 336777764
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=94.53 E-value=0.46 Score=49.83 Aligned_cols=128 Identities=14% Similarity=0.185 Sum_probs=78.5
Q ss_pred eCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc---cccccccCeeEEeeCCCEEEEEEe
Q psy2521 198 LDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 198 lD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~---~~~~~~~~~~~WspDg~~l~y~~~ 274 (783)
+|.+-+.. ++-++-+++|||..+-+.++.+-.|+ |+|||+..|....- ...+.+..-++|+.+-..|++..
T Consensus 248 vd~~Pf~g-H~~SVEDLqWSptE~~vfaScS~Dgs----IrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~- 321 (440)
T KOG0302|consen 248 VDQRPFTG-HTKSVEDLQWSPTEDGVFASCSCDGS----IRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGG- 321 (440)
T ss_pred ecCccccc-cccchhhhccCCccCceEEeeecCce----EEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecC-
Confidence 45555543 56788899999999999999887765 99999988843321 22333456789975544222221
Q ss_pred ecCCCCCCCCcccccCCceEEEEEcCCCCC-CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 275 CDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 275 ~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
+ ...+.+++|.+-+. +.+..|..-..+ +.++.|+|....++..++ ..++|.++|++-
T Consensus 322 -D--------------dGt~~iwDLR~~~~~~pVA~fk~Hk~p--ItsieW~p~e~s~iaasg---~D~QitiWDlsv 379 (440)
T KOG0302|consen 322 -D--------------DGTLSIWDLRQFKSGQPVATFKYHKAP--ITSIEWHPHEDSVIAASG---EDNQITIWDLSV 379 (440)
T ss_pred -C--------------CceEEEEEhhhccCCCcceeEEeccCC--eeEEEeccccCceEEecc---CCCcEEEEEeec
Confidence 1 12344555544332 223334332223 568999998777665433 337888888865
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=94.48 E-value=0.43 Score=56.83 Aligned_cols=180 Identities=18% Similarity=0.187 Sum_probs=104.3
Q ss_pred CeEEEeCCCCcCCC-----------CcEEEeeEEECCCCc-EEEEEEecCCCceEEEEEEECCCCccccccc----cccc
Q psy2521 193 STEVFLDPNKLSKD-----------GTTALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVK 256 (783)
Q Consensus 193 ~~~~llD~n~~~~~-----------g~~~l~~~~~SPDG~-~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~----~~~~ 256 (783)
+--+|.|++.+.++ ++-.+.++.|+|.+. .|| +|.+..+|+|||+..-+ .+-+. ....
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLA-----SGa~~geI~iWDlnn~~-tP~~~~~~~~~~e 163 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLA-----SGADDGEILIWDLNKPE-TPFTPGSQAPPSE 163 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceee-----ccCCCCcEEEeccCCcC-CCCCCCCCCCccc
Confidence 34567777775221 234577899999888 665 24455789999997522 11111 1112
Q ss_pred cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
...++|...-..|+-+..+ ..+..+|+|... +.++-+...........+.|.||+..-++.++
T Consensus 164 I~~lsWNrkvqhILAS~s~---------------sg~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As 226 (1049)
T KOG0307|consen 164 IKCLSWNRKVSHILASGSP---------------SGRAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVAS 226 (1049)
T ss_pred ceEeccchhhhHHhhccCC---------------CCCceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeec
Confidence 2467886555666544421 113445666543 22222222222223457899999987777766
Q ss_pred cCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 337 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 337 ~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
......-|-++|+.- ...|.+.+ .+...+.. .|.+.+.++++.+.++ .+++.++.++++
T Consensus 227 ~dd~~PviqlWDlR~-------assP~k~~-~~H~~GilslsWc~~D~~lllSsgkD---~~ii~wN~~tgE 287 (1049)
T KOG0307|consen 227 GDDSAPVIQLWDLRF-------ASSPLKIL-EGHQRGILSLSWCPQDPRLLLSSGKD---NRIICWNPNTGE 287 (1049)
T ss_pred CCCCCceeEeecccc-------cCCchhhh-cccccceeeeccCCCCchhhhcccCC---CCeeEecCCCce
Confidence 544447788888765 22333333 33343433 4888777888776554 468889988765
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=94.46 E-value=2.7 Score=47.97 Aligned_cols=203 Identities=18% Similarity=0.182 Sum_probs=107.4
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-cccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.++||++|+.|+-... ..|-+.|++||.. ++.... ......+.-+||++.|++..
T Consensus 24 ~~~~s~nG~~L~t~~~------d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~---------------- 81 (775)
T KOG0319|consen 24 PVAWSSNGQHLYTACG------DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTAS---------------- 81 (775)
T ss_pred ceeECCCCCEEEEecC------ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEee----------------
Confidence 4899999998876652 3588899999987 432221 11236788899998887766
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
+...+..+.+.++.--+..... -..|. ...+++|-| .|+-+ +.....+.++|.+.+- ..--+.+
T Consensus 82 rs~llrv~~L~tgk~irswKa~-He~Pv--i~ma~~~~g-~LlAt---ggaD~~v~VWdi~~~~---------~th~fkG 145 (775)
T KOG0319|consen 82 RSQLLRVWSLPTGKLIRSWKAI-HEAPV--ITMAFDPTG-TLLAT---GGADGRVKVWDIKNGY---------CTHSFKG 145 (775)
T ss_pred ccceEEEEEcccchHhHhHhhc-cCCCe--EEEEEcCCC-ceEEe---ccccceEEEEEeeCCE---------EEEEecC
Confidence 2334566666665221111110 11232 456778888 33322 2233788899987731 1122344
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
..+... .|.|+-.+..+.+ ++++..+..+|+..... -...+..+. ..+ .+..+..++.-+++..+| .-+++
T Consensus 146 ~gGvVssl~F~~~~~~~lL~s--g~~D~~v~vwnl~~~~t-cl~~~~~H~-S~v-tsL~~~~d~~~~ls~~RD--kvi~v 218 (775)
T KOG0319|consen 146 HGGVVSSLLFHPHWNRWLLAS--GATDGTVRVWNLNDKRT-CLHTMILHK-SAV-TSLAFSEDSLELLSVGRD--KVIIV 218 (775)
T ss_pred CCceEEEEEeCCccchhheee--cCCCceEEEEEcccCch-HHHHHHhhh-hhe-eeeeeccCCceEEEeccC--cEEEE
Confidence 444433 3555444322222 34566788888875331 011122222 222 233333323333333333 24788
Q ss_pred EECCCCceeeeec
Q psy2521 448 HDLNTGKRLHSFP 460 (783)
Q Consensus 448 ~dl~~G~~~~~l~ 460 (783)
||+.+-+..+.++
T Consensus 219 wd~~~~~~l~~lp 231 (775)
T KOG0319|consen 219 WDLVQYKKLKTLP 231 (775)
T ss_pred eehhhhhhhheec
Confidence 8885544444444
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.061 Score=37.52 Aligned_cols=19 Identities=21% Similarity=0.352 Sum_probs=15.6
Q ss_pred cCeeEEeeCCCEEEEEEee
Q psy2521 257 FPSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~ 275 (783)
...+.|||||++|+|++..
T Consensus 11 ~~~p~~SpDGk~i~f~s~~ 29 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNR 29 (39)
T ss_dssp EEEEEE-TTSSEEEEEEEC
T ss_pred ccCEEEecCCCEEEEEecC
Confidence 3689999999999999954
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=94.31 E-value=3.6 Score=43.67 Aligned_cols=116 Identities=8% Similarity=0.084 Sum_probs=76.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc-ccccc-------ccccccCeeEEeeCCCEEEEEEeecCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEV-------LKNVKFPSISWTHDHKGFFYNQYCDINGT 280 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~-~~~~~-------~~~~~~~~~~WspDg~~l~y~~~~~~~~~ 280 (783)
-.+-...|+|-...+.- +|+|..+|.||.+-.+- ...++ -..-+.+.+.|.|-..-++.++
T Consensus 82 ~~vLDi~w~PfnD~vIA----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa------- 150 (472)
T KOG0303|consen 82 APVLDIDWCPFNDCVIA----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSA------- 150 (472)
T ss_pred ccccccccCccCCceee----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhc-------
Confidence 34556889996654432 47788999999975432 22211 1222446788988776666665
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...+.|..|++||+. ..+-.. ++....+..|+-||..++-+. ...+|.++|..+|
T Consensus 151 --------g~Dn~v~iWnv~tge--ali~l~---hpd~i~S~sfn~dGs~l~Ttc----kDKkvRv~dpr~~ 205 (472)
T KOG0303|consen 151 --------GSDNTVSIWNVGTGE--ALITLD---HPDMVYSMSFNRDGSLLCTTC----KDKKVRVIDPRRG 205 (472)
T ss_pred --------cCCceEEEEeccCCc--eeeecC---CCCeEEEEEeccCCceeeeec----ccceeEEEcCCCC
Confidence 234579999999874 222222 455778999999999987432 2368999998874
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=94.24 E-value=11 Score=46.55 Aligned_cols=58 Identities=10% Similarity=0.020 Sum_probs=40.3
Q ss_pred EEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC----CeEEEeeeccccccEEEEEEec
Q psy2521 426 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD----LGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 426 ~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~----~g~v~~~s~~~d~~~l~~~~ss 484 (783)
|-+.|+.|+...+......|..+.. +|-.-.+++++ ...+..+.|+.|++.+.+....
T Consensus 264 WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~ 325 (928)
T PF04762_consen 264 WRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED 325 (928)
T ss_pred CCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC
Confidence 4455566666666666778888887 67655666654 3567788999998888876643
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.35 Score=51.15 Aligned_cols=135 Identities=13% Similarity=0.121 Sum_probs=78.4
Q ss_pred EcCCCCeeEEEEEeCCC---CCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECC--------
Q psy2521 175 NKGLQNHSILYVQRNLT---GSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-------- 243 (783)
Q Consensus 175 ~~~~~~~~~l~~~~~~~---g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~-------- 243 (783)
..+++.+-.||...... +...|.+ ...|+ .++.++..+.|||+|..||=. .|..++.+|-..
T Consensus 31 T~G~D~~iriW~v~r~~~~~~~~~V~y-~s~Ls-~H~~aVN~vRf~p~gelLASg-----~D~g~v~lWk~~~~~~~~~d 103 (434)
T KOG1009|consen 31 TAGGDKDIRIWKVNRSEPGGGDMKVEY-LSSLS-RHTRAVNVVRFSPDGELLASG-----GDGGEVFLWKQGDVRIFDAD 103 (434)
T ss_pred cccCccceeeeeeeecCCCCCceeEEE-eeccc-CCcceeEEEEEcCCcCeeeec-----CCCceEEEEEecCcCCcccc
Confidence 34566677788764321 1123332 23333 346778999999999999843 333455555433
Q ss_pred C-----Ccc--cc--ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC
Q psy2521 244 T-----GKD--YP--EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN 314 (783)
Q Consensus 244 t-----g~~--~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~ 314 (783)
+ .+. +. +.........++|+||+..+...+.+ ..++.+++..++.. .+.. +
T Consensus 104 ~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d----------------ns~~l~Dv~~G~l~--~~~~--d 163 (434)
T KOG1009|consen 104 TEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD----------------NSVRLWDVHAGQLL--AILD--D 163 (434)
T ss_pred chhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc----------------ceEEEEEeccceeE--eecc--c
Confidence 3 110 00 01111234678999999988877743 25778888776422 2222 2
Q ss_pred CCeeEEEEEEecCCcEEEEEEe
Q psy2521 315 GRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 315 ~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
+..+..+++|.|-++|++-.+.
T Consensus 164 h~~yvqgvawDpl~qyv~s~s~ 185 (434)
T KOG1009|consen 164 HEHYVQGVAWDPLNQYVASKSS 185 (434)
T ss_pred cccccceeecchhhhhhhhhcc
Confidence 3334558899999999875443
|
|
| >PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins | Back alignment and domain information |
|---|
Probab=94.11 E-value=1.1 Score=45.96 Aligned_cols=48 Identities=17% Similarity=0.113 Sum_probs=42.7
Q ss_pred CcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 716 ~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..+| -|.+.+..|..|++.+..++++..++. |.++....+.+++|...
T Consensus 177 ~~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~-------G~~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 177 SRCP-RLYLYSKADPLIPWRDVEEHAEEARRK-------GWDVRAEKFEDSPHVAH 224 (240)
T ss_pred CCCC-eEEecCCCCcCcCHHHHHHHHHHHHHc-------CCeEEEecCCCCchhhh
Confidence 3566 899999999999999999999999988 88999999999999753
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=94.10 E-value=0.49 Score=51.24 Aligned_cols=185 Identities=14% Similarity=0.152 Sum_probs=101.2
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
..++|||.| ++|+.-.+|+ |.|||+.....+..-.+.. ..+.+.-|+||..|+-.. ..
T Consensus 514 ALa~spDak-vcFsccsdGn----I~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGG----------------lD 572 (705)
T KOG0639|consen 514 ALAISPDAK-VCFSCCSDGN----IAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGG----------------LD 572 (705)
T ss_pred hhhcCCccc-eeeeeccCCc----EEEEEcccceeeecccCCCCCceeEEecCCCceeecCC----------------Cc
Confidence 577999998 6777766665 9999998766554322211 125788889998776333 23
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
..|..|++.+... ..-++. ...++++..+|.|.||++-. ..+.++++...+ + .+ -.+ .-.+
T Consensus 573 ntvRcWDlregrq--lqqhdF---~SQIfSLg~cP~~dWlavGM----ens~vevlh~sk-p-~k-------yql-hlhe 633 (705)
T KOG0639|consen 573 NTVRCWDLREGRQ--LQQHDF---SSQIFSLGYCPTGDWLAVGM----ENSNVEVLHTSK-P-EK-------YQL-HLHE 633 (705)
T ss_pred cceeehhhhhhhh--hhhhhh---hhhheecccCCCccceeeec----ccCcEEEEecCC-c-cc-------eee-cccc
Confidence 3577787765421 111111 11246788899999999754 336788888766 1 11 111 1112
Q ss_pred cee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 372 HHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 372 ~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
... . .|++-|++|+- +..+.- -..|++.-.. .++...+ ..++.--.+++ ++++++...+-...||.
T Consensus 634 ScVLSlKFa~cGkwfvS-tGkDnl-LnawrtPyGa-------siFqskE~SsVlsCDIS~d-dkyIVTGSGdkkATVYe 702 (705)
T KOG0639|consen 634 SCVLSLKFAYCGKWFVS-TGKDNL-LNAWRTPYGA-------SIFQSKESSSVLSCDISFD-DKYIVTGSGDKKATVYE 702 (705)
T ss_pred cEEEEEEecccCceeee-cCchhh-hhhccCcccc-------ceeeccccCcceeeeeccC-ceEEEecCCCcceEEEE
Confidence 222 2 37888876653 333211 1244444321 1222222 23333223344 77777776665555553
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=94.09 E-value=5.7 Score=40.07 Aligned_cols=188 Identities=18% Similarity=0.104 Sum_probs=91.7
Q ss_pred ECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceE
Q psy2521 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294 (783)
Q Consensus 216 ~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v 294 (783)
..++++++... +. ...|+.+|..+|+.+-.. ........+ ..++..+++... ...|
T Consensus 32 ~~~~~~~v~~~-~~----~~~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~v~v~~~----------------~~~l 88 (238)
T PF13360_consen 32 AVPDGGRVYVA-SG----DGNLYALDAKTGKVLWRFDLPGPISGAP--VVDGGRVYVGTS----------------DGSL 88 (238)
T ss_dssp EEEETTEEEEE-ET----TSEEEEEETTTSEEEEEEECSSCGGSGE--EEETTEEEEEET----------------TSEE
T ss_pred EEEeCCEEEEE-cC----CCEEEEEECCCCCEEEEeecccccccee--eecccccccccc----------------eeee
Confidence 34456655544 22 257999999999864322 111111222 345666766651 1156
Q ss_pred EEEEcCCCCCCceeEEe---cC--CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 295 YYHVLGTEQDKDIPVVE---FP--NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 295 ~~~~lgt~~~~d~~v~~---~~--~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
+..++.++. +++. .. ... .......+.+|..+++... ...|+.+|+.+|. .-|..-...
T Consensus 89 ~~~d~~tG~----~~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~g~l~~~d~~tG~-------~~w~~~~~~ 152 (238)
T PF13360_consen 89 YALDAKTGK----VLWSIYLTSSPPAG-VRSSSSPAVDGDRLYVGTS----SGKLVALDPKTGK-------LLWKYPVGE 152 (238)
T ss_dssp EEEETTTSC----EEEEEEE-SSCTCS-TB--SEEEEETTEEEEEET----CSEEEEEETTTTE-------EEEEEESST
T ss_pred EecccCCcc----eeeeeccccccccc-cccccCceEecCEEEEEec----cCcEEEEecCCCc-------EEEEeecCC
Confidence 666655542 2222 11 111 1122233334776665532 3688889988752 112211111
Q ss_pred ccc---------eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 370 MDH---------HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 370 ~~~---------~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
... ......-.++.+|+.+..+ .++.+|+.++... |+.. .. . ........++.|++.. .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g----~~~~~d~~tg~~~-w~~~-~~---~-~~~~~~~~~~~l~~~~-~~ 221 (238)
T PF13360_consen 153 PRGSSPISSFSDINGSPVISDGRVYVSSGDG----RVVAVDLATGEKL-WSKP-IS---G-IYSLPSVDGGTLYVTS-SD 221 (238)
T ss_dssp T-SS--EEEETTEEEEEECCTTEEEEECCTS----SEEEEETTTTEEE-EEEC-SS-----ECECEECCCTEEEEEE-TT
T ss_pred CCCCcceeeecccccceEEECCEEEEEcCCC----eEEEEECCCCCEE-EEec-CC---C-ccCCceeeCCEEEEEe-CC
Confidence 010 0111222334666644332 3777888876522 5322 11 1 2221234447777766 44
Q ss_pred CeeEEEEEECCCCce
Q psy2521 441 VRSVMDLHDLNTGKR 455 (783)
Q Consensus 441 g~~~l~~~dl~~G~~ 455 (783)
.+|+.+|+.+|+.
T Consensus 222 --~~l~~~d~~tG~~ 234 (238)
T PF13360_consen 222 --GRLYALDLKTGKV 234 (238)
T ss_dssp --TEEEEEETTTTEE
T ss_pred --CEEEEEECCCCCE
Confidence 5799999999986
|
... |
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=94.05 E-value=1.3 Score=46.60 Aligned_cols=117 Identities=15% Similarity=0.123 Sum_probs=73.1
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+-++++++++.+|||-.+.. ..+++++|+.+=+... ...+......++|++||..|+-.+ +
T Consensus 130 ~gl~AlS~n~~n~ylAyp~s~t---~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATAS--e----------- 193 (391)
T KOG2110|consen 130 KGLCALSPNNANCYLAYPGSTT---SGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATAS--E----------- 193 (391)
T ss_pred cceEeeccCCCCceEEecCCCC---CceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEec--c-----------
Confidence 3467788888899999986653 3679999987654332 112222346789999999887555 1
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCC--CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~--~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
...-|+++.+.+++ .+++.-.+ +....++.+|||+++|..+++. ..|++..++.
T Consensus 194 --KGTVIRVf~v~~G~----kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T----eTVHiFKL~~ 249 (391)
T KOG2110|consen 194 --KGTVIRVFSVPEGQ----KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT----ETVHIFKLEK 249 (391)
T ss_pred --CceEEEEEEcCCcc----EeeeeeCCceeeEEEEEEECCCCCeEEEecCC----CeEEEEEecc
Confidence 12234444443322 34432211 2235688999999999876443 4677777665
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.93 Score=45.05 Aligned_cols=216 Identities=11% Similarity=0.054 Sum_probs=111.4
Q ss_pred eEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecC
Q psy2521 234 WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 313 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~ 313 (783)
.++-.|||.-||..+..-....-.-..+|+.|.+.|+-..... -|.+.++..+......+-.
T Consensus 80 dftakvw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ek----------------llrvfdln~p~App~E~~g-- 141 (334)
T KOG0278|consen 80 DFTAKVWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEK----------------LLRVFDLNRPKAPPKEISG-- 141 (334)
T ss_pred cchhhhhhhhhhhhhhhhhhhheeeeEEecccchhhhccchHH----------------HhhhhhccCCCCCchhhcC--
Confidence 3667888988887653211111124678888888776443211 1233344433222111111
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCC
Q psy2521 314 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAP 393 (783)
Q Consensus 314 ~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~ 393 (783)
.+.-+-.+-|--..+.|+-+ .+...|.++|..+|. ....|.......-.-+++||+.|.+.-
T Consensus 142 -htg~Ir~v~wc~eD~~iLSS----add~tVRLWD~rTgt--------~v~sL~~~s~VtSlEvs~dG~ilTia~----- 203 (334)
T KOG0278|consen 142 -HTGGIRTVLWCHEDKCILSS----ADDKTVRLWDHRTGT--------EVQSLEFNSPVTSLEVSQDGRILTIAY----- 203 (334)
T ss_pred -CCCcceeEEEeccCceEEee----ccCCceEEEEeccCc--------EEEEEecCCCCcceeeccCCCEEEEec-----
Confidence 12222345565555665422 234678899988852 122222221111113788888766532
Q ss_pred CceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeee-cCCCeEEEeeecc
Q psy2521 394 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHISGR 472 (783)
Q Consensus 394 ~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l-~~~~g~v~~~s~~ 472 (783)
...|..+|.++-+ .|-.-.-...+++.++..+..+++...++ ..++.||..+|+.+... ....|.|..+..+
T Consensus 204 gssV~Fwdaksf~-----~lKs~k~P~nV~SASL~P~k~~fVaGged--~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFS 276 (334)
T KOG0278|consen 204 GSSVKFWDAKSFG-----LLKSYKMPCNVESASLHPKKEFFVAGGED--FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFS 276 (334)
T ss_pred CceeEEecccccc-----ceeeccCccccccccccCCCceEEecCcc--eEEEEEeccCCceeeecccCCCCceEEEEEC
Confidence 2246666665422 11111112334444544446777777666 46788898889876554 3336778788888
Q ss_pred ccccEEEEEEecCCCCceEEEEeC
Q psy2521 473 RKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 473 ~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|++. +| .|-..-+++..+-+
T Consensus 277 PdGE-~y---AsGSEDGTirlWQt 296 (334)
T KOG0278|consen 277 PDGE-LY---ASGSEDGTIRLWQT 296 (334)
T ss_pred CCCc-ee---eccCCCceEEEEEe
Confidence 8863 33 23333444544443
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.97 E-value=12 Score=41.23 Aligned_cols=245 Identities=13% Similarity=0.097 Sum_probs=129.9
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
...+...|+|..+.+...... .+.+.+.......... .+.....+.+-++++..+|-...+
T Consensus 33 ~~~v~~~~~g~~~~v~~~~~~----~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~-------------- 94 (381)
T COG3391 33 PGGVAVNPDGTQVYVANSGSN----DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGD-------------- 94 (381)
T ss_pred CceeEEcCccCEEEEEeecCc----eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCC--------------
Confidence 345788999987766654322 5666665533222211 111223466777888777665522
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+...+..+.. .+...+-.. .-.++.++|||+++.+..... ..+.+.++|..++. + ......+
T Consensus 95 -~~~v~vid~~~~~----~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~~---~-----~~~~~vG 159 (381)
T COG3391 95 -SNTVSVIDTATNT----VLGSIPVGL-GPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATNK---V-----TATIPVG 159 (381)
T ss_pred -CCeEEEEcCcccc----eeeEeeecc-CCceEEECCCCCEEEEEeccc-CCceEEEEeCCCCe---E-----EEEEecC
Confidence 2245555533321 111111100 114688999999998765432 34789999987731 0 1112222
Q ss_pred ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE--EeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK--TLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~--~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
.....-.++|+|..+|... .....|..+|.++....... ..+... ..........+++++++.-..+....+..
T Consensus 160 ~~P~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~ 235 (381)
T COG3391 160 NTPTGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLK 235 (381)
T ss_pred CCcceEEECCCCCeEEEEe---cCCCeEEEEeCCCcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEE
Confidence 2221226999999888754 33456888886653310000 011111 11111223344466777666554467888
Q ss_pred EECCCCceeeeecCCCe--EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLDLG--QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g--~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|..++... ....+.+ .-.+...+|++..+++.... ...++.+|.
T Consensus 236 id~~~~~v~-~~~~~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~ 282 (381)
T COG3391 236 IDTATGNVT-ATDLPVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDG 282 (381)
T ss_pred EeCCCceEE-EeccccccCCCCceeECCCCCEEEEEecC---CCeEEEEeC
Confidence 888666542 2222211 22344557888777765444 668888887
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=93.89 E-value=1.5 Score=47.46 Aligned_cols=234 Identities=10% Similarity=0.092 Sum_probs=120.9
Q ss_pred CcEEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCC-Ccccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 207 GTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 207 g~~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
++-.++.+.|.| .|.+|+ +... ...|+||++-+ +..++.-.+.. -...+.|+++|..|+-.++|.
T Consensus 213 H~kgvsai~~fp~~~hLlL-S~gm----D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~------- 280 (503)
T KOG0282|consen 213 HTKGVSAIQWFPKKGHLLL-SGGM----DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDR------- 280 (503)
T ss_pred CccccchhhhccceeeEEE-ecCC----CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecce-------
Confidence 345678899999 555443 3322 25789998865 55554322221 124789999999998777653
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
.|.+|++.|++.. .-|.. +.. ..-+.+-||+..+++... ...+|..+|+.+|+
T Consensus 281 ---------~lKlwDtETG~~~--~~f~~-~~~--~~cvkf~pd~~n~fl~G~---sd~ki~~wDiRs~k---------- 333 (503)
T KOG0282|consen 281 ---------FLKLWDTETGQVL--SRFHL-DKV--PTCVKFHPDNQNIFLVGG---SDKKIRQWDIRSGK---------- 333 (503)
T ss_pred ---------eeeeeccccceEE--EEEec-CCC--ceeeecCCCCCcEEEEec---CCCcEEEEeccchH----------
Confidence 4667787776422 12222 111 234567899977766533 33789999998842
Q ss_pred eeeecCccce---eE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEE
Q psy2521 364 KTVIPGMDHH---HE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHY 437 (783)
Q Consensus 364 ~~l~~~~~~~---~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~ 437 (783)
++...+.. +. .|-++|++++-.++. ...+||-....-+ .+.++ ...-.....+.. +.++.++...
T Consensus 334 --vvqeYd~hLg~i~~i~F~~~g~rFissSDd--ks~riWe~~~~v~----ik~i~-~~~~hsmP~~~~~P~~~~~~aQs 404 (503)
T KOG0282|consen 334 --VVQEYDRHLGAILDITFVDEGRRFISSSDD--KSVRIWENRIPVP----IKNIA-DPEMHTMPCLTLHPNGKWFAAQS 404 (503)
T ss_pred --HHHHHHhhhhheeeeEEccCCceEeeeccC--ccEEEEEcCCCcc----chhhc-chhhccCcceecCCCCCeehhhc
Confidence 22222221 11 255777777654443 2444554443221 11111 111222222222 2223333333
Q ss_pred ecCCeeEEEEEECCC----CceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQNVRSVMDLHDLNT----GKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~----G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+ .+.++.+.. .+. ..+... .|-...+..+||+..|. |-..-+.++.||.
T Consensus 405 ~dN---~i~ifs~~~~~r~nkk-K~feGh~vaGys~~v~fSpDG~~l~----SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 405 MDN---YIAIFSTVPPFRLNKK-KRFEGHSVAGYSCQVDFSPDGRTLC----SGDSDGKVNFWDW 461 (503)
T ss_pred cCc---eEEEEecccccccCHh-hhhcceeccCceeeEEEcCCCCeEE----eecCCccEEEeec
Confidence 332 344443210 010 112221 23223566789887765 3344568999998
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=93.88 E-value=7 Score=38.26 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=52.8
Q ss_pred EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCce
Q psy2521 319 GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGK 396 (783)
Q Consensus 319 ~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~ 396 (783)
...+.+.|.||.|+- +...+.-.++|+.+|. ..+.+.+...+.. .|||...+ +++- ....+
T Consensus 234 vaav~vdpsgrll~s----g~~dssc~lydirg~r---------~iq~f~phsadir~vrfsp~a~y--llt~--syd~~ 296 (350)
T KOG0641|consen 234 VAAVAVDPSGRLLAS----GHADSSCMLYDIRGGR---------MIQRFHPHSADIRCVRFSPGAHY--LLTC--SYDMK 296 (350)
T ss_pred eEEEEECCCcceeee----ccCCCceEEEEeeCCc---------eeeeeCCCccceeEEEeCCCceE--EEEe--cccce
Confidence 346788999998762 2333566778888741 1122333333333 48875433 3332 12346
Q ss_pred EEEEcCCCCCC-CCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 397 VVTINLNNPCE-KNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 397 L~~~d~~~~~~-~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
|-..|+.+.-. +-...++.+..+..++--|-+. +.-+++...+
T Consensus 297 ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~-d~sfisssad 340 (350)
T KOG0641|consen 297 IKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQ-DFSFISSSAD 340 (350)
T ss_pred EEEeecccchhhcCceEEEEeccCceEEEEecCc-cceeeeccCc
Confidence 77788765211 1112344444455665444443 4444444444
|
|
| >PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3 | Back alignment and domain information |
|---|
Probab=93.84 E-value=0.51 Score=48.72 Aligned_cols=127 Identities=12% Similarity=0.042 Sum_probs=70.6
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
++++-| .|.+.+.- + +++++|+||-.|--.-.. ....|...-.+.+.+ .++++-+|..|..+-.... ..+
T Consensus 4 v~t~~G-~v~V~v~G--~--~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~-p~~ 76 (283)
T PF03096_consen 4 VETPYG-SVHVTVQG--D--PKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATL-PEG 76 (283)
T ss_dssp EEETTE-EEEEEEES--S----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT------TT
T ss_pred eccCce-EEEEEEEe--c--CCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccc-ccc
Confidence 344455 35555542 2 234789999999732221 223333344455553 7999999999966522222 111
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..-.+.+++.+.+..+.+.--+ +.+..+|--+|+++-...+..+|++.-++|...|.
T Consensus 77 ---y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~ 133 (283)
T PF03096_consen 77 ---YQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPT 133 (283)
T ss_dssp --------HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES--
T ss_pred ---ccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecC
Confidence 1123456666555555544222 47999999999999999999999999999988763
|
Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A. |
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=93.79 E-value=8.6 Score=40.42 Aligned_cols=231 Identities=15% Similarity=0.137 Sum_probs=119.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+..+++-|-..+++- |+...+|.|||++||+... ++.+. ...+++.|+-.-++|-..
T Consensus 154 Vr~vavdP~n~wf~t-----gs~DrtikIwDlatg~Lkl-tltGhi~~vr~vavS~rHpYlFs~g--------------- 212 (460)
T KOG0285|consen 154 VRSVAVDPGNEWFAT-----GSADRTIKIWDLATGQLKL-TLTGHIETVRGVAVSKRHPYLFSAG--------------- 212 (460)
T ss_pred EEEEeeCCCceeEEe-----cCCCceeEEEEcccCeEEE-eecchhheeeeeeecccCceEEEec---------------
Confidence 455677787777664 3344789999999998542 33211 124788887665555333
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+|..|+|..... +.-|..-- . -...+...|--+.|+ +.+ ..+.+.++|+.+. ..... +.
T Consensus 213 -edk~VKCwDLe~nkv--IR~YhGHl-S-~V~~L~lhPTldvl~-t~g---rDst~RvWDiRtr--------~~V~~-l~ 274 (460)
T KOG0285|consen 213 -EDKQVKCWDLEYNKV--IRHYHGHL-S-GVYCLDLHPTLDVLV-TGG---RDSTIRVWDIRTR--------ASVHV-LS 274 (460)
T ss_pred -CCCeeEEEechhhhh--HHHhcccc-c-eeEEEeccccceeEE-ecC---CcceEEEeeeccc--------ceEEE-ec
Confidence 233688888865421 11111100 0 112344455554443 322 2367788888772 11222 23
Q ss_pred CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
+...... .+.+-...++- ... ...|-.+|+..+. ....++.+. ..+. .+..-....++.+...| .+.
T Consensus 275 GH~~~V~~V~~~~~dpqvit-~S~---D~tvrlWDl~agk--t~~tlt~hk-ksvr-al~lhP~e~~fASas~d---nik 343 (460)
T KOG0285|consen 275 GHTNPVASVMCQPTDPQVIT-GSH---DSTVRLWDLRAGK--TMITLTHHK-KSVR-ALCLHPKENLFASASPD---NIK 343 (460)
T ss_pred CCCCcceeEEeecCCCceEE-ecC---CceEEEeeeccCc--eeEeeeccc-ceee-EEecCCchhhhhccCCc---cce
Confidence 3332222 23343344443 222 2347778887654 133444443 3332 23322214555554444 588
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|++..|+.+..+....+.+..++.+.|+ ++++-. .-..+..+|.
T Consensus 344 ~w~~p~g~f~~nlsgh~~iintl~~nsD~--v~~~G~---dng~~~fwdw 388 (460)
T KOG0285|consen 344 QWKLPEGEFLQNLSGHNAIINTLSVNSDG--VLVSGG---DNGSIMFWDW 388 (460)
T ss_pred eccCCccchhhccccccceeeeeeeccCc--eEEEcC---CceEEEEEec
Confidence 88887787766665544455555555443 444332 2356777777
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=93.66 E-value=7.7 Score=42.34 Aligned_cols=116 Identities=14% Similarity=0.098 Sum_probs=75.2
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccc-cCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVK-FPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~-~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..+....|+|+++.++.+. +|...+.+||++++.. +..+. ..+ .-..+|+|-...++++.
T Consensus 110 ~apv~~~~f~~~d~t~l~s~----sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtG------------ 172 (487)
T KOG0310|consen 110 QAPVHVTKFSPQDNTMLVSG----SDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTG------------ 172 (487)
T ss_pred cCceeEEEecccCCeEEEec----CCCceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEec------------
Confidence 44567788999999887654 4456788999999886 33332 222 23678999999998886
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
.++..|..|++.+.. . .+.+-..+. -..++-.-|.|..|+- ...+.+.+||+.+|
T Consensus 173 ---sYDg~vrl~DtR~~~-~--~v~elnhg~-pVe~vl~lpsgs~ias-----AgGn~vkVWDl~~G 227 (487)
T KOG0310|consen 173 ---SYDGKVRLWDTRSLT-S--RVVELNHGC-PVESVLALPSGSLIAS-----AGGNSVKVWDLTTG 227 (487)
T ss_pred ---CCCceEEEEEeccCC-c--eeEEecCCC-ceeeEEEcCCCCEEEE-----cCCCeEEEEEecCC
Confidence 234578888876653 2 233321111 1234556788887763 23478999999864
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=93.64 E-value=1.7 Score=45.71 Aligned_cols=159 Identities=13% Similarity=0.100 Sum_probs=89.0
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc----ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
++.||| +.++..-+|.-...||++...+|.... .+........+.|||..+.+|++..-+
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D------------ 279 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD------------ 279 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC------------
Confidence 578888 223322345556789999988886432 222223345799999999999887432
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
..|.++++..++.+..+.. ...+.. ..-+.|+-+-..|+ .+.+...+.++|+..-. ...|+.....
T Consensus 280 ---gsIrIWDiRs~~~~~~~~~-kAh~sD-VNVISWnr~~~lLa----sG~DdGt~~iwDLR~~~-----~~~pVA~fk~ 345 (440)
T KOG0302|consen 280 ---GSIRIWDIRSGPKKAAVST-KAHNSD-VNVISWNRREPLLA----SGGDDGTLSIWDLRQFK-----SGQPVATFKY 345 (440)
T ss_pred ---ceEEEEEecCCCccceeEe-eccCCc-eeeEEccCCcceee----ecCCCceEEEEEhhhcc-----CCCcceeEEe
Confidence 2466667766544433333 223222 23467776655444 23345788899987621 1222222222
Q ss_pred CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 369 GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 369 ~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
....-.. -|.|.....+..+.. ..+|-.+|+.-
T Consensus 346 Hk~pItsieW~p~e~s~iaasg~---D~QitiWDlsv 379 (440)
T KOG0302|consen 346 HKAPITSIEWHPHEDSVIAASGE---DNQITIWDLSV 379 (440)
T ss_pred ccCCeeEEEeccccCceEEeccC---CCcEEEEEeec
Confidence 2222223 388876666655543 23477777753
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=93.60 E-value=8.4 Score=38.25 Aligned_cols=203 Identities=16% Similarity=0.143 Sum_probs=109.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-++..+.+.-||+|..-. |+| .++++|+...|..+..-.+.. ..-..+-+-|+..|+-.
T Consensus 18 gaV~avryN~dGnY~ltc----Gsd-rtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~--------------- 77 (307)
T KOG0316|consen 18 GAVRAVRYNVDGNYCLTC----GSD-RTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASC--------------- 77 (307)
T ss_pred cceEEEEEccCCCEEEEc----CCC-ceEEeecccccceeeeecCCCceeeeccccccccccccC---------------
Confidence 347788999999987643 454 689999998887654322211 11233344466555422
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
.....+++|++.|++... -|.... .-...+.+..+.. ++++. +-.+.+.++|-.+. ...+.+++
T Consensus 78 -GgDk~v~vwDV~TGkv~R--r~rgH~--aqVNtV~fNeesS-Vv~Sg---sfD~s~r~wDCRS~-------s~ePiQil 141 (307)
T KOG0316|consen 78 -GGDKAVQVWDVNTGKVDR--RFRGHL--AQVNTVRFNEESS-VVASG---SFDSSVRLWDCRSR-------SFEPIQIL 141 (307)
T ss_pred -CCCceEEEEEcccCeeee--eccccc--ceeeEEEecCcce-EEEec---cccceeEEEEcccC-------CCCccchh
Confidence 234578899998875321 122211 1223455555544 33332 22367888888762 12234455
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
.....+...+.-.+..| +.... .+.+-.+|+..+. +...--.+.+..+.+.+++...+...-+ +.|.+
T Consensus 142 dea~D~V~Si~v~~heI-vaGS~---DGtvRtydiR~G~------l~sDy~g~pit~vs~s~d~nc~La~~l~--stlrL 209 (307)
T KOG0316|consen 142 DEAKDGVSSIDVAEHEI-VAGSV---DGTVRTYDIRKGT------LSSDYFGHPITSVSFSKDGNCSLASSLD--STLRL 209 (307)
T ss_pred hhhcCceeEEEecccEE-Eeecc---CCcEEEEEeecce------eehhhcCCcceeEEecCCCCEEEEeecc--ceeee
Confidence 55555554444444433 33333 2346666665443 1222124556666655545544444444 46888
Q ss_pred EECCCCceeeee
Q psy2521 448 HDLNTGKRLHSF 459 (783)
Q Consensus 448 ~dl~~G~~~~~l 459 (783)
+|-.+|+.+...
T Consensus 210 lDk~tGklL~sY 221 (307)
T KOG0316|consen 210 LDKETGKLLKSY 221 (307)
T ss_pred cccchhHHHHHh
Confidence 898889865443
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=93.55 E-value=1.3 Score=46.82 Aligned_cols=151 Identities=13% Similarity=0.080 Sum_probs=82.7
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.-.++-+.|.|--.-+.++. |.| +++.+|++.||+.+..........+.+|+-||..|.-+..|
T Consensus 131 ~rrVg~V~wHPtA~NVLlsa---g~D-n~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD------------ 194 (472)
T KOG0303|consen 131 QRRVGLVQWHPTAPNVLLSA---GSD-NTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD------------ 194 (472)
T ss_pred ceeEEEEeecccchhhHhhc---cCC-ceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc------------
Confidence 45678899999887776654 333 78999999999865322222234688999999887765533
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCe-eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRS-LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~-~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.+|.+++..++ .+|.+...+.+ -...+.|-.+|+ |+-+.-...+..++-++|.... .+......+
T Consensus 195 ----KkvRv~dpr~~----~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl-----~eP~~~~el 260 (472)
T KOG0303|consen 195 ----KKVRVIDPRRG----TVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNL-----EEPIALQEL 260 (472)
T ss_pred ----ceeEEEcCCCC----cEeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccc-----cCcceeEEe
Confidence 35666665433 24444321111 112455677887 4322222222256667765541 111112222
Q ss_pred ecCccceeEEEEeeCCEEEEEE
Q psy2521 367 IPGMDHHHEIIANNGPELIVKT 388 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t 388 (783)
-.....-.+++++|.+.+|+..
T Consensus 261 DtSnGvl~PFyD~dt~ivYl~G 282 (472)
T KOG0303|consen 261 DTSNGVLLPFYDPDTSIVYLCG 282 (472)
T ss_pred ccCCceEEeeecCCCCEEEEEe
Confidence 2211222346888877666644
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=93.54 E-value=13 Score=40.35 Aligned_cols=245 Identities=15% Similarity=0.184 Sum_probs=123.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc---ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.++.+.|||-..--.|+.+.+| +|+..|++++.. +.....+..+++..++.+...++|...
T Consensus 236 ~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~------------ 299 (498)
T KOG4328|consen 236 PVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDN------------ 299 (498)
T ss_pred cccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeec------------
Confidence 4788999999888889888766 499999998752 211124455677888877777777662
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.....++-++.+...-+...+.. .-..++++.|-..|++.+.+-. ....++|+... ..+ ..|..-.
T Consensus 300 --~G~f~~iD~R~~~s~~~~~~lh~-----kKI~sv~~NP~~p~~laT~s~D---~T~kIWD~R~l-~~K---~sp~lst 365 (498)
T KOG4328|consen 300 --VGNFNVIDLRTDGSEYENLRLHK-----KKITSVALNPVCPWFLATASLD---QTAKIWDLRQL-RGK---ASPFLST 365 (498)
T ss_pred --ccceEEEEeecCCccchhhhhhh-----cccceeecCCCCchheeecccC---cceeeeehhhh-cCC---CCcceec
Confidence 11234444444332222222221 1235788899999988775432 34556676551 110 1121112
Q ss_pred ecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCC--CCCCCCcEEeecCCCC--ce---EEEEEEeeCCEEEEEEe
Q psy2521 367 IPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTLIPEDEN--RT---LDVVAAVANNKLIVHYI 438 (783)
Q Consensus 367 ~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~--~~~~~~~~~li~~~~~--~~---l~~~~~~~g~~l~~~~~ 438 (783)
+....... .+|||.|..|+ .+..+ .+ |-.+|.. +... .....|++... .. +...|-++ ..+++..+
T Consensus 366 ~~HrrsV~sAyFSPs~gtl~-TT~~D-~~--IRv~dss~~sa~~-~p~~~I~Hn~~t~RwlT~fKA~W~P~-~~li~vg~ 439 (498)
T KOG4328|consen 366 LPHRRSVNSAYFSPSGGTLL-TTCQD-NE--IRVFDSSCISAKD-EPLGTIPHNNRTGRWLTPFKAAWDPD-YNLIVVGR 439 (498)
T ss_pred ccccceeeeeEEcCCCCceE-eeccC-Cc--eEEeecccccccC-CccceeeccCcccccccchhheeCCC-ccEEEEec
Confidence 22222222 26999998844 33222 22 4444542 1111 12233444311 12 22334444 33443332
Q ss_pred cCCeeEEEEEECCCCceeeeecCC-CeEEEe-eeccccccEEEEEEecCCCCceEEEEe
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLD-LGQITH-ISGRRKYNEVFYGFTSFLQPGTIYHCN 495 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~-~s~~~d~~~l~~~~ss~~~P~~vy~~d 495 (783)
- ...|-++|...|+.+-++-.| ..+|.. ..+.|-.+.+. ++.+.-+.+|.+-
T Consensus 440 ~--~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~---aG~~s~Gki~vft 493 (498)
T KOG4328|consen 440 Y--PRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLA---AGGNSSGKIYVFT 493 (498)
T ss_pred c--CcceeEEcCCCCEEeeeccCccccccccceeeccccccee---ccCCccceEEEEe
Confidence 2 235888988555545666555 223322 12344433332 2334445666553
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=93.45 E-value=1.9 Score=43.88 Aligned_cols=134 Identities=13% Similarity=0.084 Sum_probs=76.0
Q ss_pred EEeCCCCcCCCCcE----EEeeEEECCCC---cEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCC
Q psy2521 196 VFLDPNKLSKDGTT----ALKLYAFSDNG---KHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHK 267 (783)
Q Consensus 196 ~llD~n~~~~~g~~----~l~~~~~SPDG---~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~ 267 (783)
.+.|.|++.+-..+ .+...++||=. .+||.. .+..++++.|+++|.......+. ...-.+.|||-.+
T Consensus 127 KVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~g-----tr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e 201 (397)
T KOG4283|consen 127 KVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAG-----TRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSE 201 (397)
T ss_pred EEeecccceeeEEeecCceeehhhcChhhhcceEEEEe-----cCCCcEEEEeccCCcceeeeccccCceEEEEeccCce
Confidence 45666666533212 25567788843 344443 33478999999999864321111 1124789999999
Q ss_pred EEEEEEeecCCCCCCCCcccccCCceEEEEEc----------CCCCCCceeEEe-cCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 268 GFFYNQYCDINGTADGTETTAHMGQKIYYHVL----------GTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 268 ~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~l----------gt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
+++++..-+ ..+.+|++ +..+.....+.+ .+....-+.+++|+.||++++...
T Consensus 202 ~vLatgsaD---------------g~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~g- 265 (397)
T KOG4283|consen 202 WVLATGSAD---------------GAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCG- 265 (397)
T ss_pred eEEEecCCC---------------ceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhcc-
Confidence 999987322 12223322 222211111222 222222346899999999997532
Q ss_pred cCCCCcEEEEEECCCCC
Q psy2521 337 NNTQGSDLHYFDLHSLP 353 (783)
Q Consensus 337 ~~~~~~~l~~~dl~~g~ 353 (783)
..+++.+++...|.
T Consensus 266 ---td~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 266 ---TDDRIRVWNMESGR 279 (397)
T ss_pred ---CccceEEeecccCc
Confidence 23678888887763
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=93.44 E-value=7.7 Score=39.91 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=65.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-Ccccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+++.++|||.-..++.. |+...++++|+++. |...+.... ..-.-..+|+.||..+|-...+
T Consensus 29 sIS~l~FSP~~~~~~~A----~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D----------- 93 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAA----GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD----------- 93 (347)
T ss_pred chheeEeccccCceEEe----cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC-----------
Confidence 58899999944433323 34446799999875 544432111 1112367999999777655533
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.++..++|.++|...+..... + .-...|-+...+-.+...+ -...|.++|...
T Consensus 94 -----k~~k~wDL~S~Q~~~v~~Hd~---p--vkt~~wv~~~~~~cl~TGS--WDKTlKfWD~R~ 146 (347)
T KOG0647|consen 94 -----KQAKLWDLASGQVSQVAAHDA---P--VKTCHWVPGMNYQCLVTGS--WDKTLKFWDTRS 146 (347)
T ss_pred -----CceEEEEccCCCeeeeeeccc---c--eeEEEEecCCCcceeEecc--cccceeecccCC
Confidence 257778998886554333332 2 1245565555543333222 225678888765
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=93.26 E-value=1.5 Score=46.24 Aligned_cols=118 Identities=18% Similarity=0.158 Sum_probs=78.2
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+-.+..+.|++ .-.+|+.+- .-+|.+||+++|........+..+..+..+|..+.|+-...+.
T Consensus 260 t~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr----------- 322 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDR----------- 322 (423)
T ss_pred ccceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCC-----------
Confidence 44688899999 446787653 3689999999998765444555556788889887776555321
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.+.+|+-.+++.. +..+.-..+..|..++.|+|-..+++++.+. .+.+.++|+.+
T Consensus 323 -----~irl~DPR~~~gs-~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~---D~t~klWDvRS 377 (423)
T KOG0313|consen 323 -----HIRLWDPRTGDGS-VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSY---DNTVKLWDVRS 377 (423)
T ss_pred -----ceeecCCCCCCCc-eeEEeeecchhhhhheecCCCCceEEEEEec---CCeEEEEEecc
Confidence 3555555444322 2223322333477789999999999887654 26777888876
|
|
| >KOG4388|consensus | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.22 Score=55.09 Aligned_cols=89 Identities=17% Similarity=0.086 Sum_probs=65.4
Q ss_pred CCccEEEEecCCCC-CccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc--
Q psy2521 553 RRNPVIIYGYGGYG-VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-- 629 (783)
Q Consensus 553 ~~~P~ll~~hGg~~-~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-- 629 (783)
...-+|++.|||.- .....+......+|-.+.|--++.+||--..| ..-....+.+.-|..|++.+
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPE-----------aPFPRaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPE-----------APFPRALEEVFFAYCWAINNCA 462 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCC-----------CCCCcHHHHHHHHHHHHhcCHH
Confidence 45678999999743 34455555556677777899999999987443 22344567888999999876
Q ss_pred --CCCCCCcEEEEEeChhHHHHHHHH
Q psy2521 630 --KYTKPKYITIMGGSNGGLLVGACL 653 (783)
Q Consensus 630 --~~~d~~ri~i~G~S~GG~l~~~~~ 653 (783)
|++ .+||++.|.|+||.|...++
T Consensus 463 llG~T-gEriv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 463 LLGST-GERIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred HhCcc-cceEEEeccCCCcceeehhH
Confidence 554 58999999999998865443
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=93.17 E-value=3.7 Score=42.20 Aligned_cols=129 Identities=19% Similarity=0.244 Sum_probs=76.0
Q ss_pred EEEeCCCCcCCC-------CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc----cccccccccCeeEEe
Q psy2521 195 EVFLDPNKLSKD-------GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY----PEVLKNVKFPSISWT 263 (783)
Q Consensus 195 ~~llD~n~~~~~-------g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~----~~~~~~~~~~~~~Ws 263 (783)
-.|||..+-+.. +...+..++|.|.|.+|+... +...++++|++|-+.. ++.........+.+|
T Consensus 196 vKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgT-----dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys 270 (430)
T KOG0640|consen 196 VKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGT-----DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYS 270 (430)
T ss_pred EEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEec-----CCCceeEEeccceeEeeecCcccccccceeEEEec
Confidence 456776543321 244678899999999999765 4578999999886532 111111112467788
Q ss_pred eCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeE--EecCCCCeeEEEEEEecCCcEEEEEEecCCCC
Q psy2521 264 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV--VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG 341 (783)
Q Consensus 264 pDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v--~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~ 341 (783)
+.|+ +|.+...+ ..|.+|+= . ..++| +....+..-..+..++.+||||+-+ + -.
T Consensus 271 ~t~~-lYvTaSkD---------------G~IklwDG---V-S~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS---G-~D 326 (430)
T KOG0640|consen 271 STGS-LYVTASKD---------------GAIKLWDG---V-SNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS---G-KD 326 (430)
T ss_pred CCcc-EEEEeccC---------------CcEEeecc---c-cHHHHHHHHhhcCCceeeeEEEccCCeEEeec---C-Cc
Confidence 8774 66555221 13444431 1 11122 2222333345688999999999732 2 23
Q ss_pred cEEEEEECCCC
Q psy2521 342 SDLHYFDLHSL 352 (783)
Q Consensus 342 ~~l~~~dl~~g 352 (783)
+-++++++.+|
T Consensus 327 S~vkLWEi~t~ 337 (430)
T KOG0640|consen 327 STVKLWEISTG 337 (430)
T ss_pred ceeeeeeecCC
Confidence 67888888774
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.39 Score=50.90 Aligned_cols=101 Identities=12% Similarity=0.063 Sum_probs=68.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cc----cccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+..+.+|+||..|.-+.. ..++-++|+.+.+.... +. ...+.+...||||+++++-.+.+
T Consensus 343 ~vtSl~ls~~g~~lLsssR-----Ddtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~d--------- 408 (459)
T KOG0288|consen 343 RVTSLDLSMDGLELLSSSR-----DDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSAD--------- 408 (459)
T ss_pred ceeeEeeccCCeEEeeecC-----CCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCC---------
Confidence 4778999999999876532 24689999988775432 11 12234678999999988766532
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEE
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLV 333 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~ 333 (783)
..||+|.+.++.-+.+ ...+..+.-+..+.|+|.|++|+-
T Consensus 409 -------gsv~iW~v~tgKlE~~--l~~s~s~~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 409 -------GSVYIWSVFTGKLEKV--LSLSTSNAAITSLSWNPSGSGLLS 448 (459)
T ss_pred -------CcEEEEEccCceEEEE--eccCCCCcceEEEEEcCCCchhhc
Confidence 3689999887654432 233222223578999999999874
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=92.92 E-value=0.59 Score=49.57 Aligned_cols=99 Identities=10% Similarity=0.072 Sum_probs=60.8
Q ss_pred CCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEE
Q psy2521 231 GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 310 (783)
Q Consensus 231 G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~ 310 (783)
|.-...|+.||..++..+.....+...+++.-++||..|.-...++ .+-.+++-+.. -+..|
T Consensus 318 gH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd----------------tl~viDlRt~e--I~~~~ 379 (459)
T KOG0288|consen 318 GHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD----------------TLKVIDLRTKE--IRQTF 379 (459)
T ss_pred cccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC----------------ceeeeeccccc--EEEEe
Confidence 3333468888887777655443344567888888988877664322 34555555432 12233
Q ss_pred ecCC---CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 311 EFPN---GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 311 ~~~~---~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
..+. ...| ..+.+||||+|++-- +....||++++.+|
T Consensus 380 sA~g~k~asDw-trvvfSpd~~YvaAG----S~dgsv~iW~v~tg 419 (459)
T KOG0288|consen 380 SAEGFKCASDW-TRVVFSPDGSYVAAG----SADGSVYIWSVFTG 419 (459)
T ss_pred ecccccccccc-ceeEECCCCceeeec----cCCCcEEEEEccCc
Confidence 3211 1112 457899999999843 33468999999885
|
|
| >KOG2100|consensus | Back alignment and domain information |
|---|
Probab=92.82 E-value=28 Score=42.02 Aligned_cols=63 Identities=19% Similarity=0.164 Sum_probs=43.4
Q ss_pred EEECCCCcEEEEEEecCC----CceEEEEEEECCCCc-cccccccccccCeeEEeeCCCEEEEEEeec
Q psy2521 214 YAFSDNGKHFAYCLSKSG----SDWNTLHIKDVDTGK-DYPEVLKNVKFPSISWTHDHKGFFYNQYCD 276 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G----~d~~~i~v~Dl~tg~-~~~~~~~~~~~~~~~WspDg~~l~y~~~~~ 276 (783)
..+|||.++++++.+..- +-....+++++.++. .......+....-+.|+|.+..++|+...+
T Consensus 102 ~~~s~d~~~~~~~~~~~~~~rhs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~~n 169 (755)
T KOG2100|consen 102 DLISPDRKYILLGRNYKKRFRHSYTAKYHLYDLNTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLHNN 169 (755)
T ss_pred cccChhhhhheeccCcccccceeeEEEEEEEEcCCCCcccCcccCCCeeEEEEEcCCCCEEEEEEecc
Confidence 488999999998876421 112356778888887 333333333346789999999999998544
|
|
| >PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function | Back alignment and domain information |
|---|
Probab=92.69 E-value=0.35 Score=37.88 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=30.2
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecC--cCCCCCccEEEEecCCCCCccC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVG--ALRNRRNPVIIYGYGGYGVSVL 570 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~--~~~~~~~P~ll~~hGg~~~~~~ 570 (783)
..|.+|+..+++.||..+.++-+.++. .....+.|+|++.||-.+++..
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 468899999999999999998887665 2345678999999998777654
|
The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B. |
| >PLN02209 serine carboxypeptidase | Back alignment and domain information |
|---|
Probab=92.63 E-value=0.57 Score=52.32 Aligned_cols=139 Identities=14% Similarity=0.160 Sum_probs=75.7
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH---------------------HHHHHHcCCEEE
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS---------------------RCMFLRHFNGIY 588 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~---------------------~~~~l~~~G~~v 588 (783)
.+....|..+..+++.... .....|+||++-||||.+...+.... -..|... ..+
T Consensus 45 ~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~--anl 120 (437)
T PLN02209 45 GIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT--ANI 120 (437)
T ss_pred EecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc--CcE
Confidence 3433345666666665443 23567999999999987643221000 0133322 456
Q ss_pred EEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHH-HHHcCCCCCCcEEEEEeChhHHHHHHHH----hcC-----C-
Q psy2521 589 AIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACL----NQR-----P- 657 (783)
Q Consensus 589 ~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~-l~~~~~~d~~ri~i~G~S~GG~l~~~~~----~~~-----p- 657 (783)
+.+|..-|.+|...-..... .......+|+...+.. +....-.....+.|.|.|+||.-+-.++ .+. +
T Consensus 121 lfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 66776655555421111111 1111234666666553 3333323345799999999998554443 222 1
Q ss_pred CceeEEEEcCCcchhh
Q psy2521 658 ELYGAALILVGALDML 673 (783)
Q Consensus 658 ~lf~a~i~~~~~~d~~ 673 (783)
=-+++++...|++|..
T Consensus 200 inl~Gi~igng~td~~ 215 (437)
T PLN02209 200 INLQGYVLGNPITHIE 215 (437)
T ss_pred eeeeeEEecCcccChh
Confidence 1468999999988764
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=92.54 E-value=13 Score=37.47 Aligned_cols=183 Identities=9% Similarity=0.031 Sum_probs=98.9
Q ss_pred cCCceEEEEEcCCCCCC-ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDK-DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~-d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....+|+++++..++.- ...-|+..+ -.++++||+....+++.... ...|.++|+.. + ..|.. ..
T Consensus 35 ~G~G~L~ile~~~~~gi~e~~s~d~~D---~LfdV~Wse~~e~~~~~a~G---DGSLrl~d~~~-~------s~Pi~-~~ 100 (311)
T KOG0277|consen 35 AGNGRLFILEVTDPKGIQECQSYDTED---GLFDVAWSENHENQVIAASG---DGSLRLFDLTM-P------SKPIH-KF 100 (311)
T ss_pred ccCceEEEEecCCCCCeEEEEeeeccc---ceeEeeecCCCcceEEEEec---CceEEEeccCC-C------Ccchh-HH
Confidence 34568999988533221 112233222 23689999999888877643 24677888654 1 22322 22
Q ss_pred cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+.... +. -|.+-.++.++++.-++ .-+|+ +.+-+. ..++...+ ...+.+..+.+....++.....|+.-+|
T Consensus 101 kEH~~EV~Svdwn~~~r~~~ltsSWD~-TiKLW--~~~r~~--Sv~Tf~gh-~~~Iy~a~~sp~~~nlfas~Sgd~~l~l 174 (311)
T KOG0277|consen 101 KEHKREVYSVDWNTVRRRIFLTSSWDG-TIKLW--DPNRPN--SVQTFNGH-NSCIYQAAFSPHIPNLFASASGDGTLRL 174 (311)
T ss_pred HhhhhheEEeccccccceeEEeeccCC-ceEee--cCCCCc--ceEeecCC-ccEEEEEecCCCCCCeEEEccCCceEEE
Confidence 222222 23 25555556666554433 22444 443332 24444433 3556666666665678877777765555
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+=++. .|+... |+.+...+..-.++.-...++++-..- ..++.+|+
T Consensus 175 wdvr~-~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd---~~vr~wDi 220 (311)
T KOG0277|consen 175 WDVRS-PGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVD---NLVRGWDI 220 (311)
T ss_pred EEecC-CCceeE-EEeccceeEeecccccCCcEEEecCCC---ceEEEEeh
Confidence 44444 477643 665544454555555455555544333 36888888
|
|
| >PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.25 Score=49.75 Aligned_cols=64 Identities=20% Similarity=0.245 Sum_probs=40.7
Q ss_pred CCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC
Q psy2521 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP 657 (783)
Q Consensus 593 ~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p 657 (783)
+||.......|.+....... ....-...|++||.+.--..+++|.+.|||-||.||..++...+
T Consensus 43 FRGTd~t~~~W~ed~~~~~~-~~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~ 106 (224)
T PF11187_consen 43 FRGTDDTLVDWKEDFNMSFQ-DETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCD 106 (224)
T ss_pred EECCCCchhhHHHHHHhhcC-CCCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHcc
Confidence 57764455667765444322 12333456777775532223456999999999999998887643
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=92.51 E-value=18 Score=39.15 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=123.5
Q ss_pred EEEEEEECCCCc--------cccc-ccc-ccc-cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC
Q psy2521 235 NTLHIKDVDTGK--------DYPE-VLK-NVK-FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ 303 (783)
Q Consensus 235 ~~i~v~Dl~tg~--------~~~~-~~~-~~~-~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~ 303 (783)
.+++|+|.+.-. ..++ ++. ..+ ..+++|++...+-..+..+ .+.+..+++....
T Consensus 147 ~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~---------------d~~i~lwdi~~~~ 211 (422)
T KOG0264|consen 147 GDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD---------------DHTICLWDINAES 211 (422)
T ss_pred CCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC---------------CCcEEEEeccccc
Confidence 568999975422 1221 111 111 2568898887766655522 3467778876554
Q ss_pred CC-----ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--E
Q psy2521 304 DK-----DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--I 376 (783)
Q Consensus 304 ~~-----d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~ 376 (783)
.+ .+.+|..-. .....++|.+-.+.++.+... ...|.++|+.++ ..+ ....+....+... .
T Consensus 212 ~~~~~~~p~~~~~~h~--~~VeDV~~h~~h~~lF~sv~d---d~~L~iwD~R~~-~~~------~~~~~~ah~~~vn~~~ 279 (422)
T KOG0264|consen 212 KEDKVVDPKTIFSGHE--DVVEDVAWHPLHEDLFGSVGD---DGKLMIWDTRSN-TSK------PSHSVKAHSAEVNCVA 279 (422)
T ss_pred cCCccccceEEeecCC--cceehhhccccchhhheeecC---CCeEEEEEcCCC-CCC------CcccccccCCceeEEE
Confidence 42 223444322 233467888888888766543 378999999852 111 1112222233322 4
Q ss_pred EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCC-Cce
Q psy2521 377 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT-GKR 455 (783)
Q Consensus 377 ~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~-G~~ 455 (783)
|.|-+..++..... ...|.++|+.+-.. ..- .+...++.+++--|++....++.++..++ +|.+||+.. |+.
T Consensus 280 fnp~~~~ilAT~S~---D~tV~LwDlRnL~~-~lh-~~e~H~dev~~V~WSPh~etvLASSg~D~--rl~vWDls~ig~e 352 (422)
T KOG0264|consen 280 FNPFNEFILATGSA---DKTVALWDLRNLNK-PLH-TFEGHEDEVFQVEWSPHNETVLASSGTDR--RLNVWDLSRIGEE 352 (422)
T ss_pred eCCCCCceEEeccC---CCcEEEeechhccc-Cce-eccCCCcceEEEEeCCCCCceeEecccCC--cEEEEeccccccc
Confidence 88877766654432 35699999876441 122 22333466676667776567777777664 677888731 222
Q ss_pred ee---------eecC---C-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 456 LH---------SFPL---D-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 456 ~~---------~l~~---~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.. ++-+ . ...|..|+++|...-+..+.+.. ..+.++.+
T Consensus 353 q~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD---N~LqIW~~ 403 (422)
T KOG0264|consen 353 QSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED---NILQIWQM 403 (422)
T ss_pred cChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC---ceEEEeec
Confidence 10 0000 0 23356677777776666555444 35555555
|
|
| >COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.49 E-value=1.5 Score=43.97 Aligned_cols=192 Identities=17% Similarity=0.168 Sum_probs=95.0
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCC-----EEEEEecCCCC----CCCChhHHh----hccccCCcChHHHH-
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN-----GIYAIPNIRGG----GELGEDWHN----AGRLLKKQNCFDDF- 619 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G-----~~v~~~~~RG~----g~~G~~~~~----~g~~~~~~~~~~D~- 619 (783)
..|+ ||+||..|...+ +....-+++.+ | ..++.+|.-|+ |.+-+.=+. -+. ........|+
T Consensus 45 ~iPT-IfIhGsgG~asS--~~~Mv~ql~~~-~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gf-e~n~~s~~~~s 119 (288)
T COG4814 45 AIPT-IFIHGSGGTASS--LNGMVNQLLPD-YKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGF-EDNTASGLDQS 119 (288)
T ss_pred ccce-EEEecCCCChhH--HHHHHHHhhhc-ccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEE-ecCcCchhhHH
Confidence 4554 567776555433 33344455543 3 34666676663 222211111 111 1222333343
Q ss_pred ---HHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC------CCceeEEEEcCCcc-hhhhcccccccccchhhhC
Q psy2521 620 ---QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGAL-DMLRFNKFTIAYYSESEFG 689 (783)
Q Consensus 620 ---~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~lf~a~i~~~~~~-d~~~~~~~~~~~~~~~~~g 689 (783)
..++.+|.++..+ .++-++||||||.-....+..+ |.+=+-+....|+- -.+.... +... ...-
T Consensus 120 ~wlk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de-~v~~---v~~~ 193 (288)
T COG4814 120 KWLKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDE-TVTD---VLKD 193 (288)
T ss_pred HHHHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCc-chhe---eecc
Confidence 3577788776444 4899999999999888887664 54544444444433 0111000 0000 0011
Q ss_pred CC--CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCC------CCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 690 SP--NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH------DDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 690 ~p--~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~------D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
.| ..-..++++... +..+.. ..- +|++.|+- |-+||...++.....+... ++.+.-.
T Consensus 194 ~~~~~~t~y~~y~~~n--~k~v~~-----~~e-vl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~-------~ksy~e~ 258 (288)
T COG4814 194 GPGLIKTPYYDYIAKN--YKKVSP-----NTE-VLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKN-------GKSYIES 258 (288)
T ss_pred CccccCcHHHHHHHhc--ceeCCC-----CcE-EEEEecccccCCcCCCceechHhHHHHHHhccC-------cceeEEE
Confidence 11 111112222211 111221 222 89999975 4678888887776666554 6665555
Q ss_pred EeCC--CCccCC
Q psy2521 762 VEQD--AGHGQG 771 (783)
Q Consensus 762 ~~~~--~gHg~~ 771 (783)
+|++ +-|.-.
T Consensus 259 ~~~Gk~a~Hs~l 270 (288)
T COG4814 259 LYKGKDARHSKL 270 (288)
T ss_pred eeeCCcchhhcc
Confidence 5554 577644
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=92.49 E-value=1.1 Score=50.85 Aligned_cols=136 Identities=14% Similarity=0.179 Sum_probs=78.2
Q ss_pred CCCeEEEeCCCCcCCCC-----cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEee
Q psy2521 191 TGSTEVFLDPNKLSKDG-----TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTH 264 (783)
Q Consensus 191 ~g~~~~llD~n~~~~~g-----~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~Wsp 264 (783)
.|-.-||||+..-.... .-.+..++|||+||++|-... | ....+.||+++.-..+.+-... -...-.+|+|
T Consensus 56 AGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEc--G-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp 132 (1080)
T KOG1408|consen 56 AGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGEC--G-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSP 132 (1080)
T ss_pred cCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEeccc--C-CCccceeeeeccccchhhhhhccccceeeeecC
Confidence 45667888876543321 235888999999999996542 2 2367999999876544332221 1235789999
Q ss_pred CCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEE
Q psy2521 265 DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDL 344 (783)
Q Consensus 265 Dg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l 344 (783)
.+++|.-+.+.- +. --.+|-|+........ .| ......+.+|.||.|.+-..++ .-.+
T Consensus 133 ~~kyvvSVGsQH----------DM--IVnv~dWr~N~~~asn-ki------ss~Vsav~fsEdgSYfvT~gnr---Hvk~ 190 (1080)
T KOG1408|consen 133 GNKYVVSVGSQH----------DM--IVNVNDWRVNSSGASN-KI------SSVVSAVAFSEDGSYFVTSGNR---HVKL 190 (1080)
T ss_pred CCcEEEeecccc----------ce--EEEhhhhhhccccccc-cc------ceeEEEEEEccCCceeeeeeee---eEEE
Confidence 999887443211 00 0122322322211110 11 1123467899999998754433 2567
Q ss_pred EEEECCC
Q psy2521 345 HYFDLHS 351 (783)
Q Consensus 345 ~~~dl~~ 351 (783)
|+++...
T Consensus 191 wyl~~~~ 197 (1080)
T KOG1408|consen 191 WYLQIQS 197 (1080)
T ss_pred EEeeccc
Confidence 7776544
|
|
| >PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children | Back alignment and domain information |
|---|
Probab=92.37 E-value=1.4 Score=45.48 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEc
Q psy2521 616 FDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALIL 666 (783)
Q Consensus 616 ~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~ 666 (783)
+.+.++.+...++. .... +-+-++|+|.||++.=+++.+.|+ -.+-.|+.
T Consensus 61 v~~Qv~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred HHHHHHHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 34554444433332 2111 468999999999999888887765 34555554
|
Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A. |
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=92.34 E-value=3.4 Score=44.00 Aligned_cols=114 Identities=15% Similarity=0.085 Sum_probs=66.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+...+||||+..++...-. ..++++|+..|........+ ....+++|.|-++.|.-.+.+... ......
T Consensus 126 iydL~Ws~d~~~l~s~s~d-----ns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~-----~~~~~~ 195 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSVD-----NSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHP-----EGFSAK 195 (434)
T ss_pred hhhhhccCCCceeeeeecc-----ceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCccc-----ceeeee
Confidence 5578999999998876532 67999999999876533222 234689999999988766654310 000011
Q ss_pred CCceEEEEE-------cCCCC-CCceeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy2521 290 MGQKIYYHV-------LGTEQ-DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVS 334 (783)
Q Consensus 290 ~~~~v~~~~-------lgt~~-~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~ 334 (783)
.-..++++. .+... ..-..+|....-+.|+....|||||..++.-
T Consensus 196 ~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtP 248 (434)
T KOG1009|consen 196 LKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTP 248 (434)
T ss_pred eeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcc
Confidence 112233332 11110 1112244433334567788999999988753
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=92.32 E-value=14 Score=37.26 Aligned_cols=215 Identities=19% Similarity=0.179 Sum_probs=102.7
Q ss_pred EEEEEECCCCcccccc-ccccccCeeE--EeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec
Q psy2521 236 TLHIKDVDTGKDYPEV-LKNVKFPSIS--WTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~-~~~~~~~~~~--WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~ 312 (783)
+|..+|+.+|+.+-.. +.. ...+.. -.++++.+|.... ...|+.++..++. .+.-+..
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~----------------~~~l~~~d~~tG~--~~W~~~~ 64 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGP-GIGGPVATAVPDGGRVYVASG----------------DGNLYALDAKTGK--VLWRFDL 64 (238)
T ss_dssp EEEEEETTTTEEEEEEECSS-SCSSEEETEEEETTEEEEEET----------------TSEEEEEETTTSE--EEEEEEC
T ss_pred EEEEEECCCCCEEEEEECCC-CCCCccceEEEeCCEEEEEcC----------------CCEEEEEECCCCC--EEEEeec
Confidence 5677777777644221 111 012232 2347777776641 2367777765542 1111222
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce-eeecCcc-ce--eEEEEeeCCEEEEEE
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGMD-HH--HEIIANNGPELIVKT 388 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~-~l~~~~~-~~--~~~~s~dg~~l~~~t 388 (783)
+. + ....+ ..++..+++... .+.|+.+|+.+|. ..|. ....... .. ......+++.+++..
T Consensus 65 ~~-~-~~~~~--~~~~~~v~v~~~----~~~l~~~d~~tG~-------~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (238)
T PF13360_consen 65 PG-P-ISGAP--VVDGGRVYVGTS----DGSLYALDAKTGK-------VLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGT 129 (238)
T ss_dssp SS-C-GGSGE--EEETTEEEEEET----TSEEEEEETTTSC-------EEEEEEE-SSCTCSTB--SEEEEETTEEEEEE
T ss_pred cc-c-cccee--eecccccccccc----eeeeEecccCCcc-------eeeeeccccccccccccccCceEecCEEEEEe
Confidence 11 1 11112 223444444331 2488889987752 2243 1211101 11 112444588888766
Q ss_pred CCCCCCceEEEEcCCCCCCCCcEEeecCCCC-ce------EEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC
Q psy2521 389 TKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RT------LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 461 (783)
Q Consensus 389 ~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~-~~------l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~ 461 (783)
. .+.|+.+|+.+++. .|+.-+..... .. .....+..++.+++.. .++. +..+|+.+|+.+-..+
T Consensus 130 ~----~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~g~--~~~~d~~tg~~~w~~~- 200 (238)
T PF13360_consen 130 S----SGKLVALDPKTGKL-LWKYPVGEPRGSSPISSFSDINGSPVISDGRVYVSS-GDGR--VVAVDLATGEKLWSKP- 200 (238)
T ss_dssp T----CSEEEEEETTTTEE-EEEEESSTT-SS--EEEETTEEEEEECCTTEEEEEC-CTSS--EEEEETTTTEEEEEEC-
T ss_pred c----cCcEEEEecCCCcE-EEEeecCCCCCCcceeeecccccceEEECCEEEEEc-CCCe--EEEEECCCCCEEEEec-
Confidence 4 46799999987652 35544433211 11 1122223335555544 3332 5556998888543223
Q ss_pred CCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy2521 462 DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 504 (783)
Q Consensus 462 ~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg 504 (783)
. ..+.. ....+++.+++.- . -..++.+|+ ++|
T Consensus 201 ~-~~~~~-~~~~~~~~l~~~~-~---~~~l~~~d~-----~tG 232 (238)
T PF13360_consen 201 I-SGIYS-LPSVDGGTLYVTS-S---DGRLYALDL-----KTG 232 (238)
T ss_dssp S-S-ECE-CEECCCTEEEEEE-T---TTEEEEEET-----TTT
T ss_pred C-CCccC-CceeeCCEEEEEe-C---CCEEEEEEC-----CCC
Confidence 2 22212 1224456666544 2 368999999 677
|
... |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=92.30 E-value=2.8 Score=46.59 Aligned_cols=93 Identities=18% Similarity=0.253 Sum_probs=48.5
Q ss_pred ceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC------Ce----
Q psy2521 395 GKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD------LG---- 464 (783)
Q Consensus 395 ~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~------~g---- 464 (783)
..||+++++.+. |-.-+.-. ...+..+....-+.|+.....+| .|..||+.+-..+..|..+ .|
T Consensus 155 ~evYRlNLEqGr---fL~P~~~~-~~~lN~v~in~~hgLla~Gt~~g--~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~ 228 (703)
T KOG2321|consen 155 SEVYRLNLEQGR---FLNPFETD-SGELNVVSINEEHGLLACGTEDG--VVEFWDPRDKSRVGTLDAASSVNSHPGGDAA 228 (703)
T ss_pred cceEEEEccccc---cccccccc-cccceeeeecCccceEEecccCc--eEEEecchhhhhheeeecccccCCCcccccc
Confidence 468888887765 22111111 12233334333356777776664 5777887544333333221 12
Q ss_pred -EEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 465 -QITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 465 -~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
+|+++..+.++=.+.+.. .-+.+|.||+.
T Consensus 229 ~svTal~F~d~gL~~aVGt----s~G~v~iyDLR 258 (703)
T KOG2321|consen 229 PSVTALKFRDDGLHVAVGT----STGSVLIYDLR 258 (703)
T ss_pred CcceEEEecCCceeEEeec----cCCcEEEEEcc
Confidence 255555554443444332 34679999993
|
|
| >KOG2182|consensus | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.66 Score=51.00 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=78.1
Q ss_pred CCccEEEEecCCCCCccCCc-C-cHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh------ccccCCcChHHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPT-F-SISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA------GRLLKKQNCFDDFQAAAE 624 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~-~-~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~------g~~~~~~~~~~D~~a~~~ 624 (783)
...|+.|++-|-.-.+..|. . ...+..|..+.|..|+...+|= ||+.+--. .+...-...+.|+...++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRF---YG~S~P~~~~st~nlk~LSs~QALaDla~fI~ 160 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRF---YGQSSPIGDLSTSNLKYLSSLQALADLAEFIK 160 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeec---cccCCCCCCCcccchhhhhHHHHHHHHHHHHH
Confidence 34688888866322221221 1 2246678888899999999998 77553221 111122345778888888
Q ss_pred HHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 625 YMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 625 ~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.+-.+ +.-++.+-..+|+||-|.|++++=..+|++..++|+.++.
T Consensus 161 ~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSap 206 (514)
T KOG2182|consen 161 AMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAP 206 (514)
T ss_pred HHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccc
Confidence 87655 4566679999999999999999999999988777776553
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=92.21 E-value=2 Score=49.59 Aligned_cols=115 Identities=10% Similarity=0.051 Sum_probs=71.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-----c----ccccccCeeEEeeCC-CEEEEEEeecCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-----V----LKNVKFPSISWTHDH-KGFFYNQYCDING 279 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-----~----~~~~~~~~~~WspDg-~~l~y~~~~~~~~ 279 (783)
-+.+++++|||+....+.-. | ..+++++.+-+.... . ..+.+.+++.+.|.. +.|+.++.|
T Consensus 453 lITAvcy~PdGk~avIGt~~-G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnD---- 523 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFN-G----YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSND---- 523 (712)
T ss_pred hheeEEeccCCceEEEEEec-c----EEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCC----
Confidence 37889999999998877643 3 466777655443211 1 112246788888654 457777743
Q ss_pred CCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 280 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 280 ~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.+|.++++.+. +-+..|....+..-...+.++.||++|+..+ +...+|+++.+.
T Consensus 524 ------------SrIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s----eDs~VYiW~~~~ 577 (712)
T KOG0283|consen 524 ------------SRIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSAS----EDSWVYIWKNDS 577 (712)
T ss_pred ------------CceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEee----cCceEEEEeCCC
Confidence 35777665332 2223344333222346788999999998654 347999999865
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=92.17 E-value=2.8 Score=44.57 Aligned_cols=195 Identities=16% Similarity=0.146 Sum_probs=103.3
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-++..+++||...+.+-.++ ..+|.|||..-.+. ..+.-.+....++.|.|. ++++++...+
T Consensus 181 eaIRdlafSpnDskF~t~Sd-----Dg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskD----------- 243 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSD-----DGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKD----------- 243 (464)
T ss_pred hhhheeccCCCCceeEEecC-----CCeEEEEeccCCchhheeccCCCCcceeccCCc-cceeEEccCC-----------
Confidence 57889999996666554432 35799999765432 333444555578999986 5666665322
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
+-|.+++-.++. .|............+.|+|+|.||+-.+ + ...+.++|+.+. .. .. ..
T Consensus 244 ----nlVKlWDprSg~----cl~tlh~HKntVl~~~f~~n~N~Llt~s-k---D~~~kv~DiR~m--kE------l~-~~ 302 (464)
T KOG0284|consen 244 ----NLVKLWDPRSGS----CLATLHGHKNTVLAVKFNPNGNWLLTGS-K---DQSCKVFDIRTM--KE------LF-TY 302 (464)
T ss_pred ----ceeEeecCCCcc----hhhhhhhccceEEEEEEcCCCCeeEEcc-C---CceEEEEehhHh--HH------HH-Hh
Confidence 145566654442 1221112222457899999999987432 2 257788888751 11 11 11
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+...++. .|.|-...|+..... .+.|+...+.... ....++...+..+-++..-.=++|+.+...+-..+.
T Consensus 303 r~Hkkdv~~~~WhP~~~~lftsgg~---Dgsvvh~~v~~~~---p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rf 376 (464)
T KOG0284|consen 303 RGHKKDVTSLTWHPLNESLFTSGGS---DGSVVHWVVGLEE---PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRF 376 (464)
T ss_pred hcchhhheeeccccccccceeeccC---CCceEEEeccccc---cccCCCcccccceeeeeccccceeEeecCCCcceee
Confidence 22222222 377766666644332 3345555554222 122333332333333332222688877666644444
Q ss_pred EE
Q psy2521 446 DL 447 (783)
Q Consensus 446 ~~ 447 (783)
+.
T Consensus 377 w~ 378 (464)
T KOG0284|consen 377 WT 378 (464)
T ss_pred ec
Confidence 43
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=92.16 E-value=12 Score=38.78 Aligned_cols=81 Identities=22% Similarity=0.322 Sum_probs=50.9
Q ss_pred CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-cccccccc
Q psy2521 179 QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKF 257 (783)
Q Consensus 179 ~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~ 257 (783)
+++-.+|+. +.|+.+ + .+.. ..-.+.++++.|.|| ||.++. |+ ..|+.|||-.|+.-- ..+... .
T Consensus 106 DG~i~iw~~----~~W~~~-~--slK~-H~~~Vt~lsiHPS~K-LALsVg--~D--~~lr~WNLV~Gr~a~v~~L~~~-a 171 (362)
T KOG0294|consen 106 DGHIIIWRV----GSWELL-K--SLKA-HKGQVTDLSIHPSGK-LALSVG--GD--QVLRTWNLVRGRVAFVLNLKNK-A 171 (362)
T ss_pred CCcEEEEEc----CCeEEe-e--eecc-cccccceeEecCCCc-eEEEEc--CC--ceeeeehhhcCccceeeccCCc-c
Confidence 345566653 456443 3 2221 223388999999998 676664 22 569999998886321 112222 2
Q ss_pred CeeEEeeCCCEEEEEE
Q psy2521 258 PSISWTHDHKGFFYNQ 273 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~ 273 (783)
..+.|+|.|++|+...
T Consensus 172 t~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 172 TLVSWSPQGDHFVVSG 187 (362)
T ss_pred eeeEEcCCCCEEEEEe
Confidence 5699999999988776
|
|
| >PLN03016 sinapoylglucose-malate O-sinapoyltransferase | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.43 Score=53.21 Aligned_cols=134 Identities=13% Similarity=0.133 Sum_probs=74.0
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcC---------------------cHHHHHHHHcCCEEEEEecC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF---------------------SISRCMFLRHFNGIYAIPNI 593 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~---------------------~~~~~~~l~~~G~~v~~~~~ 593 (783)
.+..+..+++...+ .....|+||++-||||.+...++ ...-..|... ..++.+|.
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~--anllfiDq 123 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM--ANIIFLDQ 123 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc--CcEEEecC
Confidence 35566666665443 24568999999999987642111 0001233332 45777786
Q ss_pred CCCCCCChhHHhhccccCCcChHHHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHh----cC-----C-CceeE
Q psy2521 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAE-YMINKKYTKPKYITIMGGSNGGLLVGACLN----QR-----P-ELYGA 662 (783)
Q Consensus 594 RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~----~~-----p-~lf~a 662 (783)
.-|.||...-.... ........+|+...+. |+....-.....+.|.|.|+||..+-.++. .. + =-+++
T Consensus 124 PvGtGfSy~~~~~~-~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 124 PVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 65555542111000 0011112346665544 443333233457999999999986655543 22 1 14689
Q ss_pred EEEcCCcchhh
Q psy2521 663 ALILVGALDML 673 (783)
Q Consensus 663 ~i~~~~~~d~~ 673 (783)
++...|++|..
T Consensus 203 i~iGNg~t~~~ 213 (433)
T PLN03016 203 YMLGNPVTYMD 213 (433)
T ss_pred eEecCCCcCch
Confidence 99999987764
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=91.84 E-value=11 Score=39.73 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=78.8
Q ss_pred EEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeC--CEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCc
Q psy2521 343 DLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNG--PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 420 (783)
Q Consensus 343 ~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg--~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~ 420 (783)
.||+.|+.+. ..+. -.........+...+++.. .++.+-.. ...++|+.+|+.+-. ....+... ..
T Consensus 107 ~IyIydI~~M--klLh----TI~t~~~n~~gl~AlS~n~~n~ylAyp~s--~t~GdV~l~d~~nl~---~v~~I~aH-~~ 174 (391)
T KOG2110|consen 107 SIYIYDIKDM--KLLH----TIETTPPNPKGLCALSPNNANCYLAYPGS--TTSGDVVLFDTINLQ---PVNTINAH-KG 174 (391)
T ss_pred cEEEEecccc--eeeh----hhhccCCCccceEeeccCCCCceEEecCC--CCCceEEEEEcccce---eeeEEEec-CC
Confidence 5999999872 1110 0011112233344555544 46665433 346789999987644 12333333 34
Q ss_pred eEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 421 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 421 ~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+.+..++.++.+..+.| .-|+++...+|+.+.++--. ...+.+++.++++. ++..+|-+. +|+.+-+
T Consensus 175 ~lAalafs~~G~llATASeKG-TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~--~L~~sS~Te--TVHiFKL 247 (391)
T KOG2110|consen 175 PLAALAFSPDGTLLATASEKG-TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQ--FLAASSNTE--TVHIFKL 247 (391)
T ss_pred ceeEEEECCCCCEEEEeccCc-eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCC--eEEEecCCC--eEEEEEe
Confidence 455555554477777777776 56788888889887777544 34566777777776 444455443 4555554
|
|
| >PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.27 Score=49.50 Aligned_cols=21 Identities=33% Similarity=0.528 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHh
Q psy2521 634 PKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~ 654 (783)
..+|.++|||+||+++-.++.
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 358999999999999977765
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=91.66 E-value=6 Score=39.41 Aligned_cols=95 Identities=17% Similarity=0.267 Sum_probs=55.4
Q ss_pred ceEEEEcCCC-----CCCCCcEEeecCCCCc----eEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCe
Q psy2521 395 GKVVTINLNN-----PCEKNWKTLIPEDENR----TLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLG 464 (783)
Q Consensus 395 ~~L~~~d~~~-----~~~~~~~~li~~~~~~----~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g 464 (783)
+.++.+..+. ...+-|+..+|...+. .+..+++. ..+.+++.. |...+|.+|+++|+..+++.....
T Consensus 81 G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag---GD~~~y~~dlE~G~i~r~~rGHtD 157 (325)
T KOG0649|consen 81 GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG---GDGVIYQVDLEDGRIQREYRGHTD 157 (325)
T ss_pred ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec---CCeEEEEEEecCCEEEEEEcCCcc
Confidence 4565555432 1223466555554221 13455554 336677665 557899999999998777776633
Q ss_pred EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 465 QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 465 ~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+.......+++ |-..-+++-.+|.
T Consensus 158 YvH~vv~R~~~~qil----sG~EDGtvRvWd~ 185 (325)
T KOG0649|consen 158 YVHSVVGRNANGQIL----SGAEDGTVRVWDT 185 (325)
T ss_pred eeeeeeecccCccee----ecCCCccEEEEec
Confidence 344554433444554 3344567888888
|
|
| >PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=91.43 E-value=2.7 Score=44.81 Aligned_cols=135 Identities=13% Similarity=0.100 Sum_probs=82.5
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCC--CCCCChhH-
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG--GGELGEDW- 603 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG--~g~~G~~~- 603 (783)
+.++... ++.++.+. +.|... ....-+||++||-......+........-|.+.||..+...... .. .-...
T Consensus 63 e~~~L~~-~~~~flaL-~~~~~~--~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~-~~p~~~ 137 (310)
T PF12048_consen 63 EVQWLQA-GEERFLAL-WRPANS--AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPP-ASPNRA 137 (310)
T ss_pred hcEEeec-CCEEEEEE-EecccC--CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccc-cCCccC
Confidence 3445544 55555554 455432 34567899999976655555555555566778899999987765 11 00000
Q ss_pred ------Hhhc---------------------cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC
Q psy2521 604 ------HNAG---------------------RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR 656 (783)
Q Consensus 604 ------~~~g---------------------~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~ 656 (783)
..++ ........+.=+.+++.++.+++. .+|+|+|++.|++++..++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 0000 001112334555566777776653 3499999999999999999887
Q ss_pred CC-ceeEEEEcCCc
Q psy2521 657 PE-LYGAALILVGA 669 (783)
Q Consensus 657 p~-lf~a~i~~~~~ 669 (783)
+. ...+.|...+.
T Consensus 215 ~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 215 PPPMPDALVLINAY 228 (310)
T ss_pred CCcccCeEEEEeCC
Confidence 64 35677766653
|
This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes. |
| >KOG2565|consensus | Back alignment and domain information |
|---|
Probab=91.39 E-value=0.96 Score=47.75 Aligned_cols=117 Identities=16% Similarity=0.211 Sum_probs=73.3
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc---------CCEEEEEecCCCCCCCChhHHh
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH---------FNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~---------~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.|.+|+-.-+.|...+..++.-.||..||-||+-.. |-. +..+|.. .=|-|++|-+.| || |.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E--Fyk-fIPlLT~p~~hg~~~d~~FEVI~PSlPG---yg--wSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE--FYK-FIPLLTDPKRHGNESDYAFEVIAPSLPG---YG--WSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHH--HHh-hhhhhcCccccCCccceeEEEeccCCCC---cc--cCc
Confidence 688898888887765444445557778999987543 211 1233322 136799999998 77 544
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEE
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA 663 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~ 663 (783)
+.. ..+-+...-..-..+-+...|+ ++-.|.|+-+|..+...++..+|+...+.
T Consensus 204 ~~s-k~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 204 APS-KTGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred CCc-cCCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 322 2222322211112222233454 68999999999999999999999965544
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=91.16 E-value=21 Score=43.74 Aligned_cols=60 Identities=10% Similarity=0.008 Sum_probs=38.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEe
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~ 274 (783)
.+-++.+--|+..|.+.... .+|.+.|.++................+||||.+.+++++.
T Consensus 70 ~i~s~~fl~d~~~i~v~~~~-----G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~ 129 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITAL-----GDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITG 129 (1265)
T ss_pred ceEEEEEecccceEEEEecC-----CcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeC
Confidence 46667777778777766532 3477778887754322211112357899999999988874
|
|
| >PRK13613 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=91.00 E-value=21 Score=41.66 Aligned_cols=173 Identities=12% Similarity=0.140 Sum_probs=90.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc----ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD----YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~----~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..+++|+||+.+|+... +...+++-.+..+.. ..........+.++|.++| .++-.. ..
T Consensus 364 ~~~s~avS~~g~~~A~v~~----~~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtvd--~~-------- 428 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA----DGDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLWVVD--RD-------- 428 (599)
T ss_pred CccceEEcCCCceEEEEcC----CCcEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEEEec--CC--------
Confidence 4678999999999998842 225788877655543 2222334445789998887 454331 10
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCe-eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS-LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~-~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.....-++..+ +++.. ..| ..+.-.. -+..+.+|+||-.+++....+ ....|++.-+.....+.+. -..++
T Consensus 429 --~~~~~vl~v~~-~~G~~--~~V-~~~~l~g~~I~~lrvSrDG~RvAvv~~~~-g~~~v~va~V~R~~~G~~~-l~~~~ 500 (599)
T PRK13613 429 --PADPRLLWLLQ-GDGEP--VEV-RTPELDGHRVVAVRVARDGVRVALIVEKD-GRRSLQIGRIVRDAKAVVS-VEEFR 500 (599)
T ss_pred --CCCceEEEEEc-CCCcE--EEe-eccccCCCEeEEEEECCCccEEEEEEecC-CCcEEEEEEEEeCCCCcEE-eeccE
Confidence 11121233222 22211 111 1111111 356889999999999887642 3356666543221111110 11122
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
.+......-.. .|..+ ..|+++......+..++.+.+++..
T Consensus 501 ~l~~~l~~v~~~~W~~~-~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 501 SLAPELEDVTDMSWAGD-SQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred EeccCCCccceeEEcCC-CEEEEEeccCCCCcceEEEecCCcC
Confidence 23222222122 47655 5577655333345668999988754
|
|
| >COG4782 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.79 E-value=0.83 Score=48.34 Aligned_cols=58 Identities=19% Similarity=0.208 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC--------CCceeEEEEcCCcchhhh
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLR 674 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~lf~a~i~~~~~~d~~~ 674 (783)
.-.++...+.+|....- ..+|.|+.||||.++++.++.|- +..++-+|..+|=.|.--
T Consensus 173 Sr~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 173 SRPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred hHHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 45788888999987643 35999999999999998887541 335788888888666543
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=90.42 E-value=11 Score=39.05 Aligned_cols=21 Identities=19% Similarity=0.452 Sum_probs=17.6
Q ss_pred ccccCeeEEeeCCCEEEEEEe
Q psy2521 254 NVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 254 ~~~~~~~~WspDg~~l~y~~~ 274 (783)
+..|.+++|.|.+.+|++...
T Consensus 180 N~GfEGlA~d~~~~~l~~aKE 200 (316)
T COG3204 180 NKGFEGLAWDPVDHRLFVAKE 200 (316)
T ss_pred CcCceeeecCCCCceEEEEEc
Confidence 555778999999999999883
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=90.26 E-value=33 Score=37.83 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=79.7
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
..|.+|.+.+++.. .-|..+.+. ...-+.+||..|+++..++. ...+.++|+.+. . .+ ..|...-...-
T Consensus 143 Gdiiih~~~t~~~t--t~f~~~sgq-svRll~ys~skr~lL~~asd---~G~VtlwDv~g~-s-p~---~~~~~~HsAP~ 211 (673)
T KOG4378|consen 143 GDIIIHGTKTKQKT--TTFTIDSGQ-SVRLLRYSPSKRFLLSIASD---KGAVTLWDVQGM-S-PI---FHASEAHSAPC 211 (673)
T ss_pred CcEEEEecccCccc--cceecCCCC-eEEEeecccccceeeEeecc---CCeEEEEeccCC-C-cc---cchhhhccCCc
Confidence 36888988887654 334433322 22357889999999877643 367899999872 1 10 01111111111
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
.+. .|+|....|++... -.-+|+.+|..... ....|+-+ +.+..+.+.+.+.++...... .+|+.||+.
T Consensus 212 ~gi-cfspsne~l~vsVG---~Dkki~~yD~~s~~--s~~~l~y~---~Plstvaf~~~G~~L~aG~s~--G~~i~YD~R 280 (673)
T KOG4378|consen 212 RGI-CFSPSNEALLVSVG---YDKKINIYDIRSQA--STDRLTYS---HPLSTVAFSECGTYLCAGNSK--GELIAYDMR 280 (673)
T ss_pred Ccc-eecCCccceEEEec---ccceEEEeeccccc--ccceeeec---CCcceeeecCCceEEEeecCC--ceEEEEecc
Confidence 222 38887766665433 34579999986432 23344433 345566666656666665554 489999994
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=90.25 E-value=25 Score=36.52 Aligned_cols=231 Identities=15% Similarity=0.165 Sum_probs=110.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCC--EEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHK--GFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~--~l~y~~~~~~~~~~~g~~~ 286 (783)
++..+++ +|.++|= |+..-+|+|+|+.+...+...+. ........|.++-. .|+-.+
T Consensus 45 sitavAV--s~~~~aS-----GssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~s------------- 104 (362)
T KOG0294|consen 45 SITALAV--SGPYVAS-----GSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGS------------- 104 (362)
T ss_pred ceeEEEe--cceeEec-----cCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeec-------------
Confidence 3555544 4776663 33336899999987765543322 11224556666543 333222
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.+..+..++.+.= .++-.-..+..-...++..|.||- +++.+. ...+.+++|-.|... ...-
T Consensus 105 ---dDG~i~iw~~~~W----~~~~slK~H~~~Vt~lsiHPS~KL-ALsVg~---D~~lr~WNLV~Gr~a-------~v~~ 166 (362)
T KOG0294|consen 105 ---DDGHIIIWRVGSW----ELLKSLKAHKGQVTDLSIHPSGKL-ALSVGG---DQVLRTWNLVRGRVA-------FVLN 166 (362)
T ss_pred ---CCCcEEEEEcCCe----EEeeeecccccccceeEecCCCce-EEEEcC---CceeeeehhhcCccc-------eeec
Confidence 1234555655431 122221111222456788899984 555443 256778888665211 1111
Q ss_pred ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 367 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
+.. .+..-.|+|.|+++++.... .-.+|..+.+.- ..++.-+ ...+. +.+.+++.|++ ..++ ..+.
T Consensus 167 L~~-~at~v~w~~~Gd~F~v~~~~---~i~i~q~d~A~v----~~~i~~~--~r~l~-~~~l~~~~L~v-G~d~--~~i~ 232 (362)
T KOG0294|consen 167 LKN-KATLVSWSPQGDHFVVSGRN---KIDIYQLDNASV----FREIENP--KRILC-ATFLDGSELLV-GGDN--EWIS 232 (362)
T ss_pred cCC-cceeeEEcCCCCEEEEEecc---EEEEEecccHhH----hhhhhcc--cccee-eeecCCceEEE-ecCC--ceEE
Confidence 111 22222499999999886543 234555553321 1222222 12222 23333345544 3333 3577
Q ss_pred EEECCCCceeeeecCCCeEEEeee--ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHIS--GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s--~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++|-+++.....+....-.|-++. -+++ .++.++.+|. +.|-.||+
T Consensus 233 ~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~-~~~lvTaSSD---G~I~vWd~ 280 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLAHENRVKDIASYTNPE-HEYLVTASSD---GFIKVWDI 280 (362)
T ss_pred EeccCCCccceeeecchhheeeeEEEecCC-ceEEEEeccC---ceEEEEEc
Confidence 888755555444443311121111 1232 3555666554 35556665
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=90.09 E-value=33 Score=39.79 Aligned_cols=242 Identities=11% Similarity=0.099 Sum_probs=123.3
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
...+.++++|.|...++ +..+ ..|.+|+.+|++.+. |++-...-...|-|.++.|+....
T Consensus 373 R~dVRsl~vS~d~~~~~--Sga~----~SikiWn~~t~kciR-Ti~~~y~l~~~Fvpgd~~Iv~G~k------------- 432 (888)
T KOG0306|consen 373 RSDVRSLCVSSDSILLA--SGAG----ESIKIWNRDTLKCIR-TITCGYILASKFVPGDRYIVLGTK------------- 432 (888)
T ss_pred hhheeEEEeecCceeee--ecCC----CcEEEEEccCcceeE-EeccccEEEEEecCCCceEEEecc-------------
Confidence 34578899999987655 2222 248899998887654 322222235668888888877662
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEEC-----CCCCCCcccCCCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL-----HSLPDGKISGKFP 362 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl-----~~g~~~~l~~~~~ 362 (783)
..++-+.++.+.. ++-..+.+.+-..+++.+||++..+..+.+ ..+.++|. ..|...++ -...
T Consensus 433 ---~Gel~vfdlaS~~----l~Eti~AHdgaIWsi~~~pD~~g~vT~saD----ktVkfWdf~l~~~~~gt~~k~-lsl~ 500 (888)
T KOG0306|consen 433 ---NGELQVFDLASAS----LVETIRAHDGAIWSISLSPDNKGFVTGSAD----KTVKFWDFKLVVSVPGTQKKV-LSLK 500 (888)
T ss_pred ---CCceEEEEeehhh----hhhhhhccccceeeeeecCCCCceEEecCC----cEEEEEeEEEEeccCccccee-eeec
Confidence 2245556665432 111111122345678899999998754322 23333332 11111110 0000
Q ss_pred ceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 363 LKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 363 ~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..+.+ ....+.. .+||||+.|.+.- -+. .-++|.+|- -+ -.-.|..+. -.+-.+.+..+..++++...|
T Consensus 501 ~~rtL-el~ddvL~v~~Spdgk~LaVsL-Ldn-TVkVyflDt--lK--FflsLYGHk--LPV~smDIS~DSklivTgSAD 571 (888)
T KOG0306|consen 501 HTRTL-ELEDDVLCVSVSPDGKLLAVSL-LDN-TVKVYFLDT--LK--FFLSLYGHK--LPVLSMDISPDSKLIVTGSAD 571 (888)
T ss_pred cceEE-eccccEEEEEEcCCCcEEEEEe-ccC-eEEEEEecc--ee--eeeeecccc--cceeEEeccCCcCeEEeccCC
Confidence 01111 1222222 4899998877632 222 235777663 12 012343333 122234443347788877766
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
- .|.+|-++=|.--+.+-....+|..+..-| ...++|+.+- -..+-.||.
T Consensus 572 K--nVKiWGLdFGDCHKS~fAHdDSvm~V~F~P-~~~~FFt~gK---D~kvKqWDg 621 (888)
T KOG0306|consen 572 K--NVKIWGLDFGDCHKSFFAHDDSVMSVQFLP-KTHLFFTCGK---DGKVKQWDG 621 (888)
T ss_pred C--ceEEeccccchhhhhhhcccCceeEEEEcc-cceeEEEecC---cceEEeech
Confidence 3 566666644654344433334555555555 3456665543 235666665
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=89.82 E-value=26 Score=36.04 Aligned_cols=118 Identities=12% Similarity=0.033 Sum_probs=66.7
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+++....|-|=..=+..+ ++-.-++.|||+.|-+...+ ..++ +..+-+|||=...-..+..
T Consensus 101 ky~iss~~WyP~DtGmFts----sSFDhtlKVWDtnTlQ~a~~F~me~-~VYshamSp~a~sHcLiA~------------ 163 (397)
T KOG4283|consen 101 KYAISSAIWYPIDTGMFTS----SSFDHTLKVWDTNTLQEAVDFKMEG-KVYSHAMSPMAMSHCLIAA------------ 163 (397)
T ss_pred eeeeeeeEEeeecCceeec----ccccceEEEeecccceeeEEeecCc-eeehhhcChhhhcceEEEE------------
Confidence 4666666666644433322 34446899999987654322 2333 3356778886542222221
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
..+..+|.+-++.++.-...+ .. +..-.+.+.|||...|++.+.+. ...+.++|+.
T Consensus 164 -gtr~~~VrLCDi~SGs~sH~L--sG--Hr~~vlaV~Wsp~~e~vLatgsa---Dg~irlWDiR 219 (397)
T KOG4283|consen 164 -GTRDVQVRLCDIASGSFSHTL--SG--HRDGVLAVEWSPSSEWVLATGSA---DGAIRLWDIR 219 (397)
T ss_pred -ecCCCcEEEEeccCCcceeee--cc--ccCceEEEEeccCceeEEEecCC---CceEEEEEee
Confidence 123447888888766433222 21 12234789999999999987543 2456666653
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=89.67 E-value=7.4 Score=39.81 Aligned_cols=190 Identities=13% Similarity=0.151 Sum_probs=102.3
Q ss_pred CCeeEEEEEeCCCCC--eEEEeCCCCcCCCCcEEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCcc----cccc
Q psy2521 179 QNHSILYVQRNLTGS--TEVFLDPNKLSKDGTTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKD----YPEV 251 (783)
Q Consensus 179 ~~~~~l~~~~~~~g~--~~~llD~n~~~~~g~~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~----~~~~ 251 (783)
..+.+||+....+.. .+.+|..|+-+ +.-..+.++.|.- |-++|.-+ +. ..+--|||+++|.. +++.
T Consensus 120 ~D~LRlWri~~ee~~~~~~~~L~~~kns-~~~aPlTSFDWne~dp~~igtS-Si----DTTCTiWdie~~~~~~vkTQLI 193 (364)
T KOG0290|consen 120 SDFLRLWRIGDEESRVELQSVLNNNKNS-EFCAPLTSFDWNEVDPNLIGTS-SI----DTTCTIWDIETGVSGTVKTQLI 193 (364)
T ss_pred cCeEEEEeccCcCCceehhhhhccCccc-ccCCcccccccccCCcceeEee-cc----cCeEEEEEEeeccccceeeEEE
Confidence 356788887532222 22334434322 1122456666665 44555433 32 24667889888732 3333
Q ss_pred ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCC-cE
Q psy2521 252 LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCG-RY 330 (783)
Q Consensus 252 ~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDG-k~ 330 (783)
..+.....++|+.+|..+|-+-.. ...|...+|..- .-...||+.|....-...++|++.. ++
T Consensus 194 AHDKEV~DIaf~~~s~~~FASvga---------------DGSvRmFDLR~l-eHSTIIYE~p~~~~pLlRLswnkqDpny 257 (364)
T KOG0290|consen 194 AHDKEVYDIAFLKGSRDVFASVGA---------------DGSVRMFDLRSL-EHSTIIYEDPSPSTPLLRLSWNKQDPNY 257 (364)
T ss_pred ecCcceeEEEeccCccceEEEecC---------------CCcEEEEEeccc-ccceEEecCCCCCCcceeeccCcCCchH
Confidence 344444689999988877766521 224555566543 2345788876522223566777644 55
Q ss_pred EEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 331 LLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 331 l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
++-... +.++|-++|+.- + ..+...| .+..+... .|.|....-+... +...+...+|+.+
T Consensus 258 mATf~~---dS~~V~iLDiR~-P------~tpva~L-~~H~a~VNgIaWaPhS~~hicta---GDD~qaliWDl~q 319 (364)
T KOG0290|consen 258 MATFAM---DSNKVVILDIRV-P------CTPVARL-RNHQASVNGIAWAPHSSSHICTA---GDDCQALIWDLQQ 319 (364)
T ss_pred Hhhhhc---CCceEEEEEecC-C------Ccceehh-hcCcccccceEecCCCCceeeec---CCcceEEEEeccc
Confidence 554332 347999999876 2 2233222 23333332 4888765444332 2345677788765
|
|
| >PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2 | Back alignment and domain information |
|---|
Probab=89.58 E-value=0.48 Score=52.26 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=52.1
Q ss_pred CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHH
Q psy2521 573 FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652 (783)
Q Consensus 573 ~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~ 652 (783)
|.. +...|.+.||..- .+++| .+=+|+.+.. .....+..+...++.+.+.. .+||.|+||||||+++...
T Consensus 67 ~~~-li~~L~~~GY~~~-~~l~~---~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 67 FAK-LIENLEKLGYDRG-KDLFA---APYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred HHH-HHHHHHhcCcccC-CEEEE---Eeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 443 3445666787642 22333 3334554432 22234566666677665543 5799999999999999999
Q ss_pred HhcCCC------ceeEEEEcCC
Q psy2521 653 LNQRPE------LYGAALILVG 668 (783)
Q Consensus 653 ~~~~p~------lf~a~i~~~~ 668 (783)
+...+. -.++.|+.++
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCC
Confidence 887753 2456666554
|
3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=89.49 E-value=33 Score=36.79 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=61.0
Q ss_pred eeEEEEEeCCCCCe-EEEeCCCCcCC-------C-CcEEEeeEEECCCCcEEEEEEecC----CCc-------eEEEEEE
Q psy2521 181 HSILYVQRNLTGST-EVFLDPNKLSK-------D-GTTALKLYAFSDNGKHFAYCLSKS----GSD-------WNTLHIK 240 (783)
Q Consensus 181 ~~~l~~~~~~~g~~-~~llD~n~~~~-------~-g~~~l~~~~~SPDG~~la~~~~~~----G~d-------~~~i~v~ 240 (783)
.+.|++.+.. |.. +.+-=|..+.. - ....+-+++++|||+.|....... |.. ...|+.+
T Consensus 111 ~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~ 189 (326)
T PF13449_consen 111 PPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRY 189 (326)
T ss_pred CCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEe
Confidence 4777777643 332 22312454411 1 235578999999999665554321 211 2567788
Q ss_pred ECCC-Cccc-----cccc-----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCC
Q psy2521 241 DVDT-GKDY-----PEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT 301 (783)
Q Consensus 241 Dl~t-g~~~-----~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt 301 (783)
|..+ |+.. +... .....+.+.|.+|++-++.-|.... ......+||..++..
T Consensus 190 d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~---------~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 190 DPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSP---------GTGNYKRIYRVDLSD 252 (326)
T ss_pred cCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCC---------CccceEEEEEEEccc
Confidence 8876 3221 1111 2344578999999985555552111 023345778777753
|
|
| >KOG3975|consensus | Back alignment and domain information |
|---|
Probab=89.41 E-value=6.3 Score=39.59 Aligned_cols=117 Identities=15% Similarity=0.121 Sum_probs=60.8
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHH-HcCC--EEEEEecCCCCCCCChhHHhhcccc-
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RHFN--GIYAIPNIRGGGELGEDWHNAGRLL- 610 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l-~~~G--~~v~~~~~RG~g~~G~~~~~~g~~~- 610 (783)
.|..+..+...|--.+.....|.++++-|.||... |...++.-| ...+ ..+...-.-|+-.....-.++....
T Consensus 9 ~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~g---FY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~ 85 (301)
T KOG3975|consen 9 SGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLG---FYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTN 85 (301)
T ss_pred cCCcccceeeeeeeccCCCCceEEEEecCCCCchh---HHHHHHHHHHHhcccccceeEEeccccccCCccccccccccc
Confidence 34444444444433334567899999999888653 433333222 2222 2233333333222332222222111
Q ss_pred CCcChHHHHHHH-HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 611 KKQNCFDDFQAA-AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 611 ~~~~~~~D~~a~-~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
...-.++|.+.- ++++ ++..-.-.||.++|||-|+|+++.++-.
T Consensus 86 ~eifsL~~QV~HKlaFi-k~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 86 EEIFSLQDQVDHKLAFI-KEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred ccccchhhHHHHHHHHH-HHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 112235555543 3333 3334445699999999999999999863
|
|
| >COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=89.21 E-value=1.2 Score=45.75 Aligned_cols=84 Identities=17% Similarity=0.021 Sum_probs=50.2
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHH-HHHHcCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE-YMINKKYTKP 634 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~-~l~~~~~~d~ 634 (783)
|+|+++|++.|... .|.+ ....|.. =..++....+|-+. ......+++|..+..- .+.+. -..
T Consensus 1 ~pLF~fhp~~G~~~--~~~~-L~~~l~~-~~~v~~l~a~g~~~----------~~~~~~~l~~~a~~yv~~Ir~~--QP~ 64 (257)
T COG3319 1 PPLFCFHPAGGSVL--AYAP-LAAALGP-LLPVYGLQAPGYGA----------GEQPFASLDDMAAAYVAAIRRV--QPE 64 (257)
T ss_pred CCEEEEcCCCCcHH--HHHH-HHHHhcc-CceeeccccCcccc----------cccccCCHHHHHHHHHHHHHHh--CCC
Confidence 57899999876542 2332 2344543 36677778887321 1122334566555432 22221 112
Q ss_pred CcEEEEEeChhHHHHHHHHhc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~ 655 (783)
....+.|+|+||.++..++.+
T Consensus 65 GPy~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 65 GPYVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred CCEEEEeeccccHHHHHHHHH
Confidence 368999999999999988876
|
|
| >PRK10252 entF enterobactin synthase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=89.21 E-value=1.4 Score=57.21 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=60.2
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.|+++||+.+... .|.. +...|. .++.|+.++.+|.+.. ......++++.+.+...+..- ...
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~-l~~~l~-~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~-~~~ 1132 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSV-LSRYLD-PQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQ-QPH 1132 (1296)
T ss_pred CCCeEEecCCCCchH--HHHH-HHHhcC-CCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhh-CCC
Confidence 467899999877543 2332 334454 3799999999984321 111234555554433333221 112
Q ss_pred CcEEEEEeChhHHHHHHHHhc---CCCceeEEEEcC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQ---RPELYGAALILV 667 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~---~p~lf~a~i~~~ 667 (783)
.+..++|||+||.++..++.+ +|+....++...
T Consensus 1133 ~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~ 1168 (1296)
T PRK10252 1133 GPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLD 1168 (1296)
T ss_pred CCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEec
Confidence 479999999999999998874 567666666544
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=89.00 E-value=4.5 Score=46.57 Aligned_cols=118 Identities=12% Similarity=0.107 Sum_probs=73.3
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc--cccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~--~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
++.++.|||--....++..++| .|.+||+.--. .++.+....-..-..|+|++..|+-..
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGG-------------- 239 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGG-------------- 239 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecC--------------
Confidence 5778999996655555665554 58999986433 223343333335678999766554322
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
++..|.+|+.+++......+..... + ..-+.|-|+.++.+-+.+-. ....|+++|+.-
T Consensus 240 --RDK~vkiWd~t~~~~~~~~tInTia-p--v~rVkWRP~~~~hLAtcsmv-~dtsV~VWDvrR 297 (839)
T KOG0269|consen 240 --RDKMVKIWDMTDSRAKPKHTINTIA-P--VGRVKWRPARSYHLATCSMV-VDTSVHVWDVRR 297 (839)
T ss_pred --CCccEEEEeccCCCccceeEEeecc-e--eeeeeeccCccchhhhhhcc-ccceEEEEeecc
Confidence 4456778888766544433333211 2 23578999998876554433 337899999976
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.84 E-value=31 Score=35.54 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=70.9
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCC-CEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDH-KGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg-~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
...-+||++=+...+..|.- +.-.++ + .+-.+++++|-. +.++|.+.+. .
T Consensus 41 af~~~dgs~g~a~~~eaGk~---v~~~~l------p-----aR~Hgi~~~p~~~ravafARrPG---------------t 91 (366)
T COG3490 41 AFDARDGSFGAATLSEAGKI---VFATAL------P-----ARGHGIAFHPALPRAVAFARRPG---------------T 91 (366)
T ss_pred eeeccCCceeEEEEccCCce---eeeeec------c-----cccCCeecCCCCcceEEEEecCC---------------c
Confidence 44566777766666655531 111111 1 112467777764 5677777332 1
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC-CcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~-~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
..+..+..+.+. .+++. ...+..|+-.-.+||||++|.-+.++-.. ..-|-++|...+- .. .--+....
T Consensus 92 f~~vfD~~~~~~-pv~~~-s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f-qr-------vgE~~t~G 161 (366)
T COG3490 92 FAMVFDPNGAQE-PVTLV-SQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF-QR-------VGEFSTHG 161 (366)
T ss_pred eEEEECCCCCcC-cEEEe-cccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc-ce-------ecccccCC
Confidence 344555554432 22222 23334455667899999999877665322 2567788876521 00 00111111
Q ss_pred ce-eE-EEEeeCCEEEEE
Q psy2521 372 HH-HE-IIANNGPELIVK 387 (783)
Q Consensus 372 ~~-~~-~~s~dg~~l~~~ 387 (783)
-+ .. .|.+||+.+.+.
T Consensus 162 iGpHev~lm~DGrtlvva 179 (366)
T COG3490 162 IGPHEVTLMADGRTLVVA 179 (366)
T ss_pred cCcceeEEecCCcEEEEe
Confidence 11 12 488999877764
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=88.54 E-value=32 Score=35.30 Aligned_cols=226 Identities=12% Similarity=0.156 Sum_probs=114.9
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.++.+-|||.. +..+. | .-|.-+|-++.+...-++ ........+|.++| .|+|+....
T Consensus 107 hgiv~gpdg~~--Witd~-~---~aI~R~dpkt~evt~f~lp~~~a~~nlet~vfD~~G-~lWFt~q~G----------- 168 (353)
T COG4257 107 HGIVVGPDGSA--WITDT-G---LAIGRLDPKTLEVTRFPLPLEHADANLETAVFDPWG-NLWFTGQIG----------- 168 (353)
T ss_pred ceEEECCCCCe--eEecC-c---ceeEEecCcccceEEeecccccCCCcccceeeCCCc-cEEEeeccc-----------
Confidence 35778899974 44443 2 257778887777543222 22233567887777 477776321
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
++-+|+- ....+.||..|.... -.++..+|||.-- +.+.. .+-|-.+|..++..+.+ + .-
T Consensus 169 -------~yGrLdP-a~~~i~vfpaPqG~g-pyGi~atpdGsvw-yasla---gnaiaridp~~~~aev~----p---~P 228 (353)
T COG4257 169 -------AYGRLDP-ARNVISVFPAPQGGG-PYGICATPDGSVW-YASLA---GNAIARIDPFAGHAEVV----P---QP 228 (353)
T ss_pred -------cceecCc-ccCceeeeccCCCCC-CcceEECCCCcEE-EEecc---ccceEEcccccCCccee----c---CC
Confidence 1113322 123445666654332 2467889999743 33222 25667777665421111 1 01
Q ss_pred cCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe-ecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l-i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.....+. ..|+.--.++++.+. .+..|+++|..... |.+- +|.. ...-..+.+.+.+++.+ +.-+ ..-|
T Consensus 229 ~~~~~gsRriwsdpig~~wittw---g~g~l~rfdPs~~s---W~eypLPgs-~arpys~rVD~~grVW~-sea~-agai 299 (353)
T COG4257 229 NALKAGSRRIWSDPIGRAWITTW---GTGSLHRFDPSVTS---WIEYPLPGS-KARPYSMRVDRHGRVWL-SEAD-AGAI 299 (353)
T ss_pred CcccccccccccCccCcEEEecc---CCceeeEeCccccc---ceeeeCCCC-CCCcceeeeccCCcEEe-eccc-cCce
Confidence 1111111 234433345665432 34579999987654 7653 4433 33333455555334433 3322 2457
Q ss_pred EEEECCCCceeeeecCC---CeEEEeeeccccccEEEEEEecCCCC
Q psy2521 446 DLHDLNTGKRLHSFPLD---LGQITHISGRRKYNEVFYGFTSFLQP 488 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~---~g~v~~~s~~~d~~~l~~~~ss~~~P 488 (783)
.++|..+.+ .+.++.| .+.+ .+.+ ...+++++.+...++
T Consensus 300 ~rfdpeta~-ftv~p~pr~n~gn~-ql~g--r~ge~W~~e~gvd~l 341 (353)
T COG4257 300 GRFDPETAR-FTVLPIPRPNSGNI-QLDG--RPGELWFTEAGVDAL 341 (353)
T ss_pred eecCcccce-EEEecCCCCCCCce-eccC--CCCceeecccCccee
Confidence 888885433 4666665 3433 3333 335577666555443
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=88.32 E-value=33 Score=35.26 Aligned_cols=113 Identities=13% Similarity=0.184 Sum_probs=71.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-cc-----ccc-ccccCeeEEee--CCCEEEEEEeecCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PE-----VLK-NVKFPSISWTH--DHKGFFYNQYCDINGT 280 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~~-----~~~-~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~ 280 (783)
.+.-+.|-|++++||-..+ ..|.+++++.+..+ .. ..+ ...+++-+||| ||..+.-+.
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~------- 191 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS------- 191 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-------
Confidence 3567899999999997653 56899998876542 11 112 23467788999 677776554
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
...++.+++.|... .-.| +... .....++.+.|+-++++.+..+ ...|.++|...
T Consensus 192 ----------d~tl~~~D~RT~~~-~~sI-~dAH-gq~vrdlDfNpnkq~~lvt~gD---dgyvriWD~R~ 246 (370)
T KOG1007|consen 192 ----------DSTLQFWDLRTMKK-NNSI-EDAH-GQRVRDLDFNPNKQHILVTCGD---DGYVRIWDTRK 246 (370)
T ss_pred ----------CCcEEEEEccchhh-hcch-hhhh-cceeeeccCCCCceEEEEEcCC---CccEEEEeccC
Confidence 22577777765421 1111 1111 1233467788999998876543 36788889866
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=88.20 E-value=13 Score=37.06 Aligned_cols=62 Identities=16% Similarity=0.195 Sum_probs=37.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCc----eEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEE
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSD----WNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d----~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~ 273 (783)
.+..-.++||||+.+=.....|.+ ...||.+-+. +++.. -..-.+. .++.|+-|.|.+||+.
T Consensus 110 R~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~~v~Is-Ngl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 110 RLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAG-HQVELIWNCVGIS-NGLAWDSDAKKFYYID 176 (310)
T ss_pred ccccCccCCCCceeeeeeccccccccccccEEEEeccC-CCceeeehhccCC-ccccccccCcEEEEEc
Confidence 355667899999966555554443 2356665443 33211 1111222 4799999999999987
|
|
| >PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides [] | Back alignment and domain information |
|---|
Probab=87.84 E-value=0.98 Score=41.61 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 616 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
.+.+...++.+.++.- +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 4455666666665533 4799999999999998777653
|
Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A .... |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=87.70 E-value=38 Score=36.35 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=72.6
Q ss_pred EeeEEECCCCcEEEEEEecCC---CceEEEEEEECCCCccc-----cccc-----------cccccCeeEEeeCCCEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSG---SDWNTLHIKDVDTGKDY-----PEVL-----------KNVKFPSISWTHDHKGFFY 271 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G---~d~~~i~v~Dl~tg~~~-----~~~~-----------~~~~~~~~~WspDg~~l~y 271 (783)
.-++++.+||..+. +++.+ .....|+.+|.+ |..+ +... .+..+.+++++|||++|+.
T Consensus 87 ~Egi~~~~~g~~~i--s~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~ 163 (326)
T PF13449_consen 87 PEGIAVPPDGSFWI--SSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFA 163 (326)
T ss_pred hhHeEEecCCCEEE--EeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEE
Confidence 44577777886433 33322 112578888877 5432 2111 1223467999999998887
Q ss_pred EEeecCCCCCCCCcccccCCceEEEEEcCCCC-CCceeEEecCC-----CCeeEEEEEEecCCcEEEEEEecCC---CCc
Q psy2521 272 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQ-DKDIPVVEFPN-----GRSLGLHSEVTDCGRYLLVSTSNNT---QGS 342 (783)
Q Consensus 272 ~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~-~~d~~v~~~~~-----~~~~~~~~~~SpDGk~l~~~~~~~~---~~~ 342 (783)
.....................+++..+..+.. .....+|.... ...-...+.+-+|++.|++...... ...
T Consensus 164 ~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ 243 (326)
T PF13449_consen 164 AMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYK 243 (326)
T ss_pred EECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceE
Confidence 76332211100000011223456666655421 22334555431 1112346778899998887654211 237
Q ss_pred EEEEEECCC
Q psy2521 343 DLHYFDLHS 351 (783)
Q Consensus 343 ~l~~~dl~~ 351 (783)
+||.+++..
T Consensus 244 ri~~v~l~~ 252 (326)
T PF13449_consen 244 RIYRVDLSD 252 (326)
T ss_pred EEEEEEccc
Confidence 888888865
|
|
| >PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=87.68 E-value=1.2 Score=43.92 Aligned_cols=57 Identities=23% Similarity=0.293 Sum_probs=42.9
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC----C---CceeEEEEcCCcch
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR----P---ELYGAALILVGALD 671 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~----p---~lf~a~i~~~~~~d 671 (783)
-.+.|+.+|.++.+++.. +-..+.|.|||.|+.+...++..+ | .|.+|-+.+.++..
T Consensus 75 ~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYPVTV 138 (207)
T ss_pred hhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCccccH
Confidence 458999999998776532 235799999999999999998765 2 25666676666554
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=87.54 E-value=6.4 Score=45.96 Aligned_cols=115 Identities=16% Similarity=0.101 Sum_probs=73.2
Q ss_pred CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEE-CC-CCc-ccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 207 GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD-VD-TGK-DYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 207 g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~D-l~-tg~-~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
+++.+.-.++||.|+++|-+-++ | +|.||. .. .++ .....+.|. .....+||+||..|+-..
T Consensus 204 Htf~~t~~~~spn~~~~Aa~d~d-G----rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG-------- 270 (792)
T KOG1963|consen 204 HTFNITCVALSPNERYLAAGDSD-G----RILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGG-------- 270 (792)
T ss_pred hcccceeEEeccccceEEEeccC-C----cEEEEeccccccccccceEEEecccccceeEEecCCceEeecc--------
Confidence 34446778999999999976543 3 366664 33 122 222234444 457899999998776322
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
+-..+.+|.++|+..+ . ...-. .-...+.+|||+....+... .+.|.++.+.+
T Consensus 271 --------~E~VLv~Wq~~T~~kq--f-LPRLg--s~I~~i~vS~ds~~~sl~~~----DNqI~li~~~d 323 (792)
T KOG1963|consen 271 --------REGVLVLWQLETGKKQ--F-LPRLG--SPILHIVVSPDSDLYSLVLE----DNQIHLIKASD 323 (792)
T ss_pred --------cceEEEEEeecCCCcc--c-ccccC--CeeEEEEEcCCCCeEEEEec----CceEEEEeccc
Confidence 2346789999987532 2 22212 23568899999998776643 37888887754
|
|
| >KOG1282|consensus | Back alignment and domain information |
|---|
Probab=87.41 E-value=3.5 Score=45.93 Aligned_cols=140 Identities=14% Similarity=0.104 Sum_probs=78.6
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHH----------------HHHHcCCEEEEEecCC
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRC----------------MFLRHFNGIYAIPNIR 594 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~----------------~~l~~~G~~v~~~~~R 594 (783)
+....|..+..+++.-.. .....|+||+.-||||=+...++..+.. +|-. =..++..|-.
T Consensus 51 v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk--~aNiLfLd~P 126 (454)
T KOG1282|consen 51 VNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNK--EANILFLDQP 126 (454)
T ss_pred CCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccc--cccEEEEecC
Confidence 333467788888776543 3456799999999988664323211111 1111 1234555555
Q ss_pred CCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcCCCCCCcEEEEEeChhHHHH----HHHHhcC-----C-CceeEE
Q psy2521 595 GGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKYTKPKYITIMGGSNGGLLV----GACLNQR-----P-ELYGAA 663 (783)
Q Consensus 595 G~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~~~d~~ri~i~G~S~GG~l~----~~~~~~~-----p-~lf~a~ 663 (783)
-|.||--.-...........+..|+..+ .+|+.+..---.....|.|.|++|.-+ ..+...+ | --+++.
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 4444431111111111222334555554 557776544445689999999999554 4444433 2 257999
Q ss_pred EEcCCcchhhh
Q psy2521 664 LILVGALDMLR 674 (783)
Q Consensus 664 i~~~~~~d~~~ 674 (783)
+.+.|++|...
T Consensus 207 ~IGNg~td~~~ 217 (454)
T KOG1282|consen 207 AIGNGLTDPEI 217 (454)
T ss_pred EecCcccCccc
Confidence 99999988754
|
|
| >PRK13614 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=87.38 E-value=29 Score=40.17 Aligned_cols=168 Identities=11% Similarity=0.041 Sum_probs=84.2
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..+++|+||+.+|+.. + +...+++... ++ ..+....+.....++|.++| .++-.. + .
T Consensus 344 ~~~s~avS~~g~~~A~~~---~-~~~~l~~~~~-g~-~~~~~~~g~~Lt~PS~d~~g-~vWtv~-~-------------g 402 (573)
T PRK13614 344 GPASPAESPVSQTVAFLN---G-SRTTLYTVSP-GQ-PARALTSGSTLTRPSFSPQD-WVWTAG-P-------------G 402 (573)
T ss_pred cccceeecCCCceEEEec---C-CCcEEEEecC-CC-cceeeecCCCccCCcccCCC-CEEEee-C-------------C
Confidence 466789999999999973 2 2246776654 22 22223334445788998887 454222 1 1
Q ss_pred CCceEEEEEc-CCCC--CCceeEE--ecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC---CCCCCcccCCC
Q psy2521 290 MGQKIYYHVL-GTEQ--DKDIPVV--EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH---SLPDGKISGKF 361 (783)
Q Consensus 290 ~~~~v~~~~l-gt~~--~~d~~v~--~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~---~g~~~~l~~~~ 361 (783)
.+..|.+.+- +++. ...+... ...++ .-+..+.+|+||-.+++....+ ....|++.-+. .|....+.
T Consensus 403 ~~~~vv~~~~~g~~~~~~~~~~~v~~~~l~g-~~I~~lrvSrDG~R~Avi~~~~-g~~~V~va~V~R~~~G~P~~L~--- 477 (573)
T PRK13614 403 GNGRIVAYRPTGVAEGAQAPTVTLTADWLAG-RTVKELRVSREGVRALVISEQN-GKSRVQVAGIVRNEDGTPRELT--- 477 (573)
T ss_pred CCceEEEEecCCCcccccccceeecccccCC-CeeEEEEECCCccEEEEEEEeC-CccEEEEEEEEeCCCCCeEEcc---
Confidence 1224444332 1111 0011111 11111 1256889999999998877542 33457764332 22111111
Q ss_pred CceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCC
Q psy2521 362 PLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNP 405 (783)
Q Consensus 362 ~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~ 405 (783)
....+... ..... .|..+ +.|++.+.....+..++.+.+..+
T Consensus 478 ~~~~~~~~-~~~~sl~W~~~-~sl~V~~~~~~~~~~~~~v~v~~g 520 (573)
T PRK13614 478 APITLAAD-SDADTGAWVGD-STVVVTKASATSNVVPELLSVDAG 520 (573)
T ss_pred CceecccC-CCcceeEEcCC-CEEEEEeccCCCcceEEEEEeCCC
Confidence 11111111 11112 37655 567777655445556677777444
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=87.01 E-value=41 Score=34.89 Aligned_cols=73 Identities=10% Similarity=0.090 Sum_probs=45.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.++.+.+||.+..|+.++- + ..++++|+.+.+.+..-....-.-.-+|.+ ...++....
T Consensus 15 ~IS~v~f~~~~~~LLvssW-D----gslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~--------------- 73 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSSW-D----GSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGL--------------- 73 (323)
T ss_pred ceeeEEEcCcCCcEEEEec-c----CcEEEEeccchhhhhheecCCceeeeeccC-CceEEEecc---------------
Confidence 3888999999998887763 2 458999988765443222222123456654 445555442
Q ss_pred CCceEEEEEcCCCCC
Q psy2521 290 MGQKIYYHVLGTEQD 304 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~ 304 (783)
..+|.++++.++..
T Consensus 74 -dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 74 -DGQVRRYDLNTGNE 87 (323)
T ss_pred -CceEEEEEecCCcc
Confidence 34688888877653
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=86.66 E-value=78 Score=37.75 Aligned_cols=206 Identities=13% Similarity=0.180 Sum_probs=102.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccccc-CeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~-~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+.++.|.|++-..+ +|.|.+.|.||+..+.+.+-.-.+..++ -...|.+.=-+|+-.+
T Consensus 52 GpVRgv~FH~~qplFV-----SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSAS-------------- 112 (1202)
T KOG0292|consen 52 GPVRGVDFHPTQPLFV-----SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSAS-------------- 112 (1202)
T ss_pred CccceeeecCCCCeEE-----ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEcc--------------
Confidence 3478999999998532 2566799999999888765322222221 1334444333343222
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC--------
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG-------- 359 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~-------- 359 (783)
.++.|.+|+.-+.. -+.+.. .+..|.+-+++.|-...|+ +++ -...|.++|+.+........
T Consensus 113 --DDQTIrIWNwqsr~--~iavlt--GHnHYVMcAqFhptEDlIV-SaS---LDQTVRVWDisGLRkk~~~pg~~e~~~~ 182 (1202)
T KOG0292|consen 113 --DDQTIRIWNWQSRK--CIAVLT--GHNHYVMCAQFHPTEDLIV-SAS---LDQTVRVWDISGLRKKNKAPGSLEDQMR 182 (1202)
T ss_pred --CCCeEEEEeccCCc--eEEEEe--cCceEEEeeccCCccceEE-Eec---ccceEEEEeecchhccCCCCCCchhhhh
Confidence 23467777765432 223333 3344666777888666554 222 12578888876521111100
Q ss_pred ------------CCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE
Q psy2521 360 ------------KFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 425 (783)
Q Consensus 360 ------------~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~ 425 (783)
+.-.+.++.+.+.+.. .|.| ..=+|++..+...-+||+++... .|+.=+-.+....+..+
T Consensus 183 ~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhp--TlpliVSG~DDRqVKlWrmnetK----aWEvDtcrgH~nnVssv 256 (1202)
T KOG0292|consen 183 GQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHP--TLPLIVSGADDRQVKLWRMNETK----AWEVDTCRGHYNNVSSV 256 (1202)
T ss_pred ccccchhhcCCcCeeeeeeecccccccceEEecC--CcceEEecCCcceeeEEEecccc----ceeehhhhcccCCcceE
Confidence 0011122333333332 2322 22233344444455788776422 26532222222223333
Q ss_pred EEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 426 AAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 426 ~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
.+.....++++..+|. .+.+||+.
T Consensus 257 lfhp~q~lIlSnsEDk--sirVwDm~ 280 (1202)
T KOG0292|consen 257 LFHPHQDLILSNSEDK--SIRVWDMT 280 (1202)
T ss_pred EecCccceeEecCCCc--cEEEEecc
Confidence 3333256777777764 46777774
|
|
| >COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.58 E-value=2.2 Score=46.08 Aligned_cols=97 Identities=19% Similarity=0.072 Sum_probs=55.3
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCCEE---EEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~---v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
.++++||. +... ..|.. +..+++..|+. +..+.+.++..-+..+ ..-+-+.+-++-.... ..
T Consensus 61 pivlVhG~-~~~~-~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----------~~~~ql~~~V~~~l~~--~g 125 (336)
T COG1075 61 PIVLVHGL-GGGY-GNFLP-LDYRLAILGWLTNGVYAFELSGGDGTYSLA----------VRGEQLFAYVDEVLAK--TG 125 (336)
T ss_pred eEEEEccC-cCCc-chhhh-hhhhhcchHHHhcccccccccccCCCcccc----------ccHHHHHHHHHHHHhh--cC
Confidence 57788996 2222 12332 23446666776 6677776541111110 1111222333333333 22
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCC--CceeEEEEcCC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRP--ELYGAALILVG 668 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p--~lf~a~i~~~~ 668 (783)
..++.+.|||+||.++-..+...+ ...+.++...+
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 379999999999999998888887 56677766544
|
|
| >KOG2541|consensus | Back alignment and domain information |
|---|
Probab=85.87 E-value=9.8 Score=38.76 Aligned_cols=91 Identities=16% Similarity=0.058 Sum_probs=49.8
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHH-cCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
.|+ |..||-...+....+. .+.+++. --|..+.+.++--| -...|... ..+....+...+++.--=
T Consensus 24 ~P~-ii~HGigd~c~~~~~~-~~~q~l~~~~g~~v~~leig~g--~~~s~l~p---------l~~Qv~~~ce~v~~m~~l 90 (296)
T KOG2541|consen 24 VPV-IVWHGIGDSCSSLSMA-NLTQLLEELPGSPVYCLEIGDG--IKDSSLMP---------LWEQVDVACEKVKQMPEL 90 (296)
T ss_pred CCE-EEEeccCcccccchHH-HHHHHHHhCCCCeeEEEEecCC--cchhhhcc---------HHHHHHHHHHHHhcchhc
Confidence 454 4568865555443332 2334444 23788887776433 11222221 234444443333333333
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPE 658 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~ 658 (783)
++-.-|+|.|.||+.+=+++..-++
T Consensus 91 sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 91 SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred cCceEEEEEccccHHHHHHHHhCCC
Confidence 5678999999999998777765443
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=85.78 E-value=8.5 Score=41.82 Aligned_cols=153 Identities=15% Similarity=0.212 Sum_probs=80.9
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVV 398 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~ 398 (783)
..+.-+|+|-||+.. +....||++.+.+|. .+ ..+...+..-.. .|+.||..|+ ....++ .|.
T Consensus 85 ~al~s~n~G~~l~ag----~i~g~lYlWelssG~--LL------~v~~aHYQ~ITcL~fs~dgs~ii-TgskDg---~V~ 148 (476)
T KOG0646|consen 85 HALASSNLGYFLLAG----TISGNLYLWELSSGI--LL------NVLSAHYQSITCLKFSDDGSHII-TGSKDG---AVL 148 (476)
T ss_pred eeeecCCCceEEEee----cccCcEEEEEecccc--HH------HHHHhhccceeEEEEeCCCcEEE-ecCCCc---cEE
Confidence 456779999999843 233689999999962 11 111112222222 4777776554 333332 333
Q ss_pred EEcC---CCCCCC---CcEEeecCCCCceEEEEEEeeC--CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeee
Q psy2521 399 TINL---NNPCEK---NWKTLIPEDENRTLDVVAAVAN--NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHIS 470 (783)
Q Consensus 399 ~~d~---~~~~~~---~~~~li~~~~~~~l~~~~~~~g--~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s 470 (783)
.+.+ -..... ...-.+.+. .-.+..+.+..| +.-+++...| .-+.+||+..|..+..+.+| ..+.++.
T Consensus 149 vW~l~~lv~a~~~~~~~p~~~f~~H-tlsITDl~ig~Gg~~~rl~TaS~D--~t~k~wdlS~g~LLlti~fp-~si~av~ 224 (476)
T KOG0646|consen 149 VWLLTDLVSADNDHSVKPLHIFSDH-TLSITDLQIGSGGTNARLYTASED--RTIKLWDLSLGVLLLTITFP-SSIKAVA 224 (476)
T ss_pred EEEEEeecccccCCCccceeeeccC-cceeEEEEecCCCccceEEEecCC--ceEEEEEeccceeeEEEecC-CcceeEE
Confidence 3332 111110 011111111 222344444443 2334444444 35778888778888888887 3456667
Q ss_pred ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 471 GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 471 ~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+|.+..+|+..+ -+.+|..++
T Consensus 225 lDpae~~~yiGt~----~G~I~~~~~ 246 (476)
T KOG0646|consen 225 LDPAERVVYIGTE----EGKIFQNLL 246 (476)
T ss_pred EcccccEEEecCC----cceEEeeeh
Confidence 7787777765432 356777776
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=85.29 E-value=49 Score=34.14 Aligned_cols=256 Identities=12% Similarity=0.099 Sum_probs=123.0
Q ss_pred EeeEEEC--CC-CcEEEEEEecCC-CceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFS--DN-GKHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~S--PD-G~~la~~~~~~G-~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
+.+..|| || +-+||.++-... +..-+|.-.|.++|+.+....... -.+-+.|.||.++++= +.
T Consensus 47 lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~p----dl------- 115 (364)
T KOG0290|consen 47 LYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYP----DL------- 115 (364)
T ss_pred eeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCc----ch-------
Confidence 4444555 33 334666543211 223455566677887665432211 1246789999876542 11
Q ss_pred cccccCCceEEEEEcCCCCCC--ceeEEecCCCCee---EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDK--DIPVVEFPNGRSL---GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 359 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~--d~~v~~~~~~~~~---~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~ 359 (783)
-..-...|.+|+++....+ -..+.....+..+ ..++.|..=.-.++.+++- + +.--++|+.+|....+
T Consensus 116 --LATs~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi--D-TTCTiWdie~~~~~~v-- 188 (364)
T KOG0290|consen 116 --LATSSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI--D-TTCTIWDIETGVSGTV-- 188 (364)
T ss_pred --hhcccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc--c-CeEEEEEEeeccccce--
Confidence 0112235666777643221 1111111111111 2356666533333333332 1 2334556655311111
Q ss_pred CCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC--CceEEEEEEeeCCEEEEE
Q psy2521 360 KFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE--NRTLDVVAAVANNKLIVH 436 (783)
Q Consensus 360 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~--~~~l~~~~~~~g~~l~~~ 436 (783)
..+|+......+. .|+.+|..++..... .+.+-.+|+...+ -.+++=|.+ ...+..+.+.+.+--++.
T Consensus 189 ---kTQLIAHDKEV~DIaf~~~s~~~FASvga---DGSvRmFDLR~le---HSTIIYE~p~~~~pLlRLswnkqDpnymA 259 (364)
T KOG0290|consen 189 ---KTQLIAHDKEVYDIAFLKGSRDVFASVGA---DGSVRMFDLRSLE---HSTIIYEDPSPSTPLLRLSWNKQDPNYMA 259 (364)
T ss_pred ---eeEEEecCcceeEEEeccCccceEEEecC---CCcEEEEEecccc---cceEEecCCCCCCcceeeccCcCCchHHh
Confidence 2345544333333 476655555544333 3457777876543 234443432 233444444433332333
Q ss_pred EecCCeeEEEEEECCC-CceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 437 YIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 437 ~~~~g~~~l~~~dl~~-G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.......+|.++|+.. +..+-+|....+.|.++.|.|....-.++...- .+...+|+
T Consensus 260 Tf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD---~qaliWDl 317 (364)
T KOG0290|consen 260 TFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDD---CQALIWDL 317 (364)
T ss_pred hhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCc---ceEEEEec
Confidence 3333346788888743 333444544567788899988876666555433 35677888
|
|
| >cd00741 Lipase Lipase | Back alignment and domain information |
|---|
Probab=85.16 E-value=1.2 Score=41.88 Aligned_cols=38 Identities=18% Similarity=0.095 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP 657 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p 657 (783)
.+...++.+..+ ....+|.+.|||+||.++..++.+..
T Consensus 13 ~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 13 LVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 444444443332 24569999999999999988876654
|
Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site. |
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=84.64 E-value=2.8 Score=47.84 Aligned_cols=115 Identities=11% Similarity=0.116 Sum_probs=65.6
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..+.++++...|+-+. ...+|.+||++.++.+. ++-.-.....+.|.|=+.+++-.+.
T Consensus 71 spIeSl~f~~~E~Llaags-----asgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gSt------------- 132 (825)
T KOG0267|consen 71 SPIESLTFDTSERLLAAGS-----ASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGST------------- 132 (825)
T ss_pred CcceeeecCcchhhhcccc-----cCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccc-------------
Confidence 3477889999999888543 33579999999888654 2211122346779998765522221
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
..+..+| ++.-.. +++....+........++|||+|++- +.+.+.+-++|+..|
T Consensus 133 -dtd~~iw--D~Rk~G----c~~~~~s~~~vv~~l~lsP~Gr~v~~----g~ed~tvki~d~~ag 186 (825)
T KOG0267|consen 133 -DTDLKIW--DIRKKG----CSHTYKSHTRVVDVLRLSPDGRWVAS----GGEDNTVKIWDLTAG 186 (825)
T ss_pred -cccceeh--hhhccC----ceeeecCCcceeEEEeecCCCceeec----cCCcceeeeeccccc
Confidence 1112233 322111 12211112222235689999999973 334577888888654
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=84.62 E-value=6.3 Score=43.49 Aligned_cols=18 Identities=11% Similarity=-0.086 Sum_probs=14.3
Q ss_pred eEEEEEEecCCcEEEEEE
Q psy2521 318 LGLHSEVTDCGRYLLVST 335 (783)
Q Consensus 318 ~~~~~~~SpDGk~l~~~~ 335 (783)
..+.++||+||.+++...
T Consensus 258 SifnlsWS~DGTQ~a~gt 275 (737)
T KOG1524|consen 258 SIFNLSWSADGTQATCGT 275 (737)
T ss_pred ceEEEEEcCCCceeeccc
Confidence 456899999999987643
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=84.45 E-value=68 Score=35.13 Aligned_cols=116 Identities=11% Similarity=0.169 Sum_probs=72.1
Q ss_pred EEeeEEECCCCc-EEEEEEecCCCceEEEEEEECCCCccccc-----cccccccCeeEEeeCCCEEEEEE-eecCCCCCC
Q psy2521 210 ALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDVDTGKDYPE-----VLKNVKFPSISWTHDHKGFFYNQ-YCDINGTAD 282 (783)
Q Consensus 210 ~l~~~~~SPDG~-~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-----~~~~~~~~~~~WspDg~~l~y~~-~~~~~~~~~ 282 (783)
.+...+|.|-.. .|+.+-+..| +|-+||+.+.+...+ +......+++.|+|-+..-+|+. ++
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G----~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyD------- 256 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGG----QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYD------- 256 (498)
T ss_pred ceEEEEecccCcceEEEEccCCC----cEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccC-------
Confidence 467788999776 5554444444 689999964433222 22333357888999775444444 33
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
..+.+.++.....+ .|+...++..++.+..++.+.+.+++..+-+ ..-++|+.+
T Consensus 257 ---------GtiR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G----~f~~iD~R~ 310 (498)
T KOG4328|consen 257 ---------GTIRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRSVLFGDNVG----NFNVIDLRT 310 (498)
T ss_pred ---------ceeeeeeecchhhH--HHhhcCccceeeeeccccCCCccEEEeeccc----ceEEEEeec
Confidence 25777777766554 3333333445777888999998888765432 556777765
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=84.18 E-value=30 Score=36.09 Aligned_cols=120 Identities=10% Similarity=0.089 Sum_probs=66.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc------cccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK------DYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~------~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
...+.|||.++++|... |. ..|-|+=.+.-. .+...+.. ....+.|.|++-.++-.+.|-
T Consensus 103 At~V~WsP~enkFAVgS---ga--r~isVcy~E~ENdWWVsKhikkPirS-tv~sldWhpnnVLlaaGs~D~-------- 168 (361)
T KOG1523|consen 103 ATCVKWSPKENKFAVGS---GA--RLISVCYYEQENDWWVSKHIKKPIRS-TVTSLDWHPNNVLLAAGSTDG-------- 168 (361)
T ss_pred eeeEeecCcCceEEecc---Cc--cEEEEEEEecccceehhhhhCCcccc-ceeeeeccCCcceecccccCc--------
Confidence 46799999999998754 23 334444333211 11111111 125788988876555444221
Q ss_pred cccccCCceEEEEEcCCCCCCc---------eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKD---------IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d---------~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
.-+-...|+..+++..... .++.+-.....|..++.|||+|..|++...+ +.+.+.|..+
T Consensus 169 ---k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd----s~v~~~da~~ 237 (361)
T KOG1523|consen 169 ---KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD----STVSFVDAAG 237 (361)
T ss_pred ---ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC----CceEEeecCC
Confidence 1112234444444432211 1222221234577899999999999998654 4677888776
|
|
| >PF03283 PAE: Pectinacetylesterase | Back alignment and domain information |
|---|
Probab=83.95 E-value=0.88 Score=49.39 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
.-+.+++++|..+|+-++++|.|.|.|+||+-+..-+.
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 46779999999999999999999999999998876543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=83.86 E-value=65 Score=34.44 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=60.4
Q ss_pred EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCc--
Q psy2521 377 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-- 454 (783)
Q Consensus 377 ~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~-- 454 (783)
|++ ...+|-.+. .+.|..+|+.++.. ..+++... .+..+.......|++....+ ..+.+||+.+|.
T Consensus 268 w~d-~~v~yS~Sw----DHTIk~WDletg~~--~~~~~~~k---sl~~i~~~~~~~Ll~~gssd--r~irl~DPR~~~gs 335 (423)
T KOG0313|consen 268 WSD-ATVIYSVSW----DHTIKVWDLETGGL--KSTLTTNK---SLNCISYSPLSKLLASGSSD--RHIRLWDPRTGDGS 335 (423)
T ss_pred EcC-CCceEeecc----cceEEEEEeecccc--eeeeecCc---ceeEeecccccceeeecCCC--CceeecCCCCCCCc
Confidence 544 444443332 35688899887651 23344332 33333333335677666555 578899997653
Q ss_pred e-eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 455 R-LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 455 ~-~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
. ...+......|+++.++|.....+++.+-. .++-.+|+
T Consensus 336 ~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D---~t~klWDv 375 (423)
T KOG0313|consen 336 VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD---NTVKLWDV 375 (423)
T ss_pred eeEEeeecchhhhhheecCCCCceEEEEEecC---CeEEEEEe
Confidence 2 233434455678888888877777665443 35667777
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=83.69 E-value=35 Score=35.59 Aligned_cols=247 Identities=13% Similarity=0.105 Sum_probs=121.0
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEEC
Q psy2521 163 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 242 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl 242 (783)
+.+|+..+....+ .+.-.||.+... .-++.+- ++++ +...+.++.|+|-..+|.-...+.+ -||+..
T Consensus 18 wn~drt~iAv~~~---~~evhiy~~~~~-~~w~~~h---tls~-Hd~~vtgvdWap~snrIvtcs~drn-----ayVw~~ 84 (361)
T KOG1523|consen 18 WNSDRTQIAVSPN---NHEVHIYSMLGA-DLWEPAH---TLSE-HDKIVTGVDWAPKSNRIVTCSHDRN-----AYVWTQ 84 (361)
T ss_pred ecCCCceEEeccC---CceEEEEEecCC-CCceece---ehhh-hCcceeEEeecCCCCceeEccCCCC-----cccccc
Confidence 4445555555443 224566766532 2244322 2222 2234677999999999876654433 477776
Q ss_pred -CCCcccc----ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe---cCC
Q psy2521 243 -DTGKDYP----EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE---FPN 314 (783)
Q Consensus 243 -~tg~~~~----~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~---~~~ 314 (783)
++|+-.+ +.+... ...+.|||.+..|+..+. .+--.|++.. +.+|=.|-. .|-
T Consensus 85 ~~~~~WkptlvLlRiNrA-At~V~WsP~enkFAVgSg--------------ar~isVcy~E----~ENdWWVsKhikkPi 145 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRINRA-ATCVKWSPKENKFAVGSG--------------ARLISVCYYE----QENDWWVSKHIKKPI 145 (361)
T ss_pred CCCCeeccceeEEEeccc-eeeEeecCcCceEEeccC--------------ccEEEEEEEe----cccceehhhhhCCcc
Confidence 5665332 123333 268999999988877651 1112333332 111111110 111
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCCC-cEEEEEECCCCCCCc-ccCCCCceeeecCc--cceeE---EEEeeCCEEEEE
Q psy2521 315 GRSLGLHSEVTDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGK-ISGKFPLKTVIPGM--DHHHE---IIANNGPELIVK 387 (783)
Q Consensus 315 ~~~~~~~~~~SpDGk~l~~~~~~~~~~-~~l~~~dl~~g~~~~-l~~~~~~~~l~~~~--~~~~~---~~s~dg~~l~~~ 387 (783)
......+.|.|++-.|+..+.++.-. ...|+.+++..+... .-..+|+-.+..+. ..++. .|+|.|.+|.++
T Consensus 146 -rStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv 224 (361)
T KOG1523|consen 146 -RSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWV 224 (361)
T ss_pred -ccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEe
Confidence 11235778888886665432221111 356677776633211 11223333344333 22222 499999999997
Q ss_pred ECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 388 TTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 388 t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
... .-+...|..++.+ ..+.+.... ..+..+.+...+.++. ...+..+.++..+-
T Consensus 225 ~Hd----s~v~~~da~~p~~-~v~~~~~~~--lP~ls~~~ise~~vv~-ag~~c~P~lf~~~~ 279 (361)
T KOG1523|consen 225 GHD----STVSFVDAAGPSE-RVQSVATAQ--LPLLSVSWISENSVVA-AGYDCGPVLFVTDE 279 (361)
T ss_pred cCC----CceEEeecCCCch-hccchhhcc--CCceeeEeecCCceee-cCCCCCceEEEecc
Confidence 654 2366777666531 122222222 2333344443244443 33333456666664
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=83.15 E-value=65 Score=33.86 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=60.9
Q ss_pred ceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 233 DWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 233 d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
-...|+|+|+.+++...-- ..+.....+.+.|+.-.++.+... ++.|.+|++.+. .=+.||.
T Consensus 113 ~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~Sk---------------D~svRlwnI~~~--~Cv~VfG 175 (385)
T KOG1034|consen 113 YLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASK---------------DHSVRLWNIQTD--VCVAVFG 175 (385)
T ss_pred ceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecC---------------CceEEEEeccCC--eEEEEec
Confidence 4578999999988754322 222233577888998777777632 346888888654 2345666
Q ss_pred cCC-CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 312 FPN-GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 312 ~~~-~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
.-. +..-.+++.|++||.+|+- -+.+ ..|.++++.
T Consensus 176 G~egHrdeVLSvD~~~~gd~i~S---cGmD-hslk~W~l~ 211 (385)
T KOG1034|consen 176 GVEGHRDEVLSVDFSLDGDRIAS---CGMD-HSLKLWRLN 211 (385)
T ss_pred ccccccCcEEEEEEcCCCCeeec---cCCc-ceEEEEecC
Confidence 532 2234579999999998862 2222 445555554
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=82.99 E-value=45 Score=38.90 Aligned_cols=198 Identities=10% Similarity=0.028 Sum_probs=105.8
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.-++.-+.|++-.-.|..+-+ ....|..||+...+-......+. ..-.+.|+|--...|++.. +
T Consensus 133 ~Rs~~~ldfh~tep~iliSGS----QDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~-d---------- 197 (839)
T KOG0269|consen 133 ERSANKLDFHSTEPNILISGS----QDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIH-D---------- 197 (839)
T ss_pred ccceeeeeeccCCccEEEecC----CCceEEEEeeecccccccccccchhhhceeeccCCCceEEEec-C----------
Confidence 345777888888888877644 34579999998776554333322 1247899986543333332 2
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
...|..|+|..+ ++..+....+.+...-+.|+|++.||+- +.....+.++|..++... +...+
T Consensus 198 ----sG~lqlWDlRqp---~r~~~k~~AH~GpV~c~nwhPnr~~lAT----GGRDK~vkiWd~t~~~~~------~~~tI 260 (839)
T KOG0269|consen 198 ----SGYLQLWDLRQP---DRCEKKLTAHNGPVLCLNWHPNREWLAT----GGRDKMVKIWDMTDSRAK------PKHTI 260 (839)
T ss_pred ----CceEEEeeccCc---hhHHHHhhcccCceEEEeecCCCceeee----cCCCccEEEEeccCCCcc------ceeEE
Confidence 224667777643 2222222222234456889999999983 223367788888763111 11111
Q ss_pred ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC-CEEEEEEecCC
Q psy2521 367 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN-NKLIVHYIQNV 441 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g-~~l~~~~~~~g 441 (783)
-....-+--.|-|+-...+-.+.- .....|..+|+..+=. ....+..++ .++..+++..+ ..+++.-.+|+
T Consensus 261 nTiapv~rVkWRP~~~~hLAtcsm-v~dtsV~VWDvrRPYI-P~~t~~eH~--~~vt~i~W~~~d~~~l~s~sKD~ 332 (839)
T KOG0269|consen 261 NTIAPVGRVKWRPARSYHLATCSM-VVDTSVHVWDVRRPYI-PYATFLEHT--DSVTGIAWDSGDRINLWSCSKDG 332 (839)
T ss_pred eecceeeeeeeccCccchhhhhhc-cccceEEEEeeccccc-cceeeeccC--ccccceeccCCCceeeEeecCcc
Confidence 111111111477776543332222 2345688899876421 123333333 34455555543 34555555664
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=82.68 E-value=78 Score=34.48 Aligned_cols=162 Identities=11% Similarity=0.090 Sum_probs=88.3
Q ss_pred EEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceE
Q psy2521 320 LHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKV 397 (783)
Q Consensus 320 ~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L 397 (783)
.++.|++.-.-.+++.+ +...+.++|+...... ......+..+.+...... .|.+-...++-.... .++|
T Consensus 181 ~glsWn~~~~g~Lls~~---~d~~i~lwdi~~~~~~--~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~d---d~~L 252 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSGS---DDHTICLWDINAESKE--DKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGD---DGKL 252 (422)
T ss_pred cccccccccceeEeecc---CCCcEEEEeccccccC--CccccceEEeecCCcceehhhccccchhhheeecC---CCeE
Confidence 35678877666655433 3368889998763211 011223334444443333 365544445443332 4579
Q ss_pred EEEcCCCCCCCCcEEeecCCCCceE-EEEEEeeCCEEEEEEecCCeeEEEEEECCCCc-eeeeecCCCeEEEeeeccccc
Q psy2521 398 VTINLNNPCEKNWKTLIPEDENRTL-DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKY 475 (783)
Q Consensus 398 ~~~d~~~~~~~~~~~li~~~~~~~l-~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~-~~~~l~~~~g~v~~~s~~~d~ 475 (783)
..+|+.+. ..+.+..+......+. -.+-..+ +.|+++...| ..|.+||+++=+ .+..+......|..+.++|..
T Consensus 253 ~iwD~R~~-~~~~~~~~~ah~~~vn~~~fnp~~-~~ilAT~S~D--~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~ 328 (422)
T KOG0264|consen 253 MIWDTRSN-TSKPSHSVKAHSAEVNCVAFNPFN-EFILATGSAD--KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHN 328 (422)
T ss_pred EEEEcCCC-CCCCcccccccCCceeEEEeCCCC-CceEEeccCC--CcEEEeechhcccCceeccCCCcceEEEEeCCCC
Confidence 99998752 1222222222212221 1223333 6677766655 478999985432 234444446677888999988
Q ss_pred cEEEEEEecCCCCceEEEEeC
Q psy2521 476 NEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 476 ~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++.+-. +-.++..+|+
T Consensus 329 etvLASSg---~D~rl~vWDl 346 (422)
T KOG0264|consen 329 ETVLASSG---TDRRLNVWDL 346 (422)
T ss_pred CceeEecc---cCCcEEEEec
Confidence 77765433 3457888888
|
|
| >KOG3724|consensus | Back alignment and domain information |
|---|
Probab=82.45 E-value=1.4 Score=50.93 Aligned_cols=44 Identities=23% Similarity=0.437 Sum_probs=29.6
Q ss_pred HHHHHHHHHHc--C---CC--CCCcEEEEEeChhHHHHHHHHhcCCCceeEE
Q psy2521 619 FQAAAEYMINK--K---YT--KPKYITIMGGSNGGLLVGACLNQRPELYGAA 663 (783)
Q Consensus 619 ~~a~~~~l~~~--~---~~--d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~ 663 (783)
+..|++++.+. + +. -|.-|+|.||||||..+-++++. |......
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~s 209 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccch
Confidence 34566666542 2 22 26789999999999999888775 6544443
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=81.86 E-value=66 Score=39.68 Aligned_cols=119 Identities=18% Similarity=0.212 Sum_probs=68.2
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc--ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP--EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
++|--||++.|.+.-....+...|+|||-+ |.... +...+.. ..++|-|.|..|+-...... ..
T Consensus 201 IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~-~~LsWkPsgs~iA~iq~~~s------------d~ 266 (1265)
T KOG1920|consen 201 ISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQ-HSLSWKPSGSLIAAIQCKTS------------DS 266 (1265)
T ss_pred EEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccc-cceeecCCCCeEeeeeecCC------------CC
Confidence 788999999998776666666899999988 43221 2222222 68999998887776653321 11
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEEC
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL 349 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl 349 (783)
.-+++-+-|-.-.+ .+...|.+..-...+.|..++.-|++..... ....|.++-+
T Consensus 267 ~IvffErNGL~hg~--f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~-e~~~v~lwt~ 321 (1265)
T KOG1920|consen 267 DIVFFERNGLRHGE--FVLPFPLDEKEVEELAWNSNSDILAVVTSNL-ENSLVQLWTT 321 (1265)
T ss_pred cEEEEecCCccccc--cccCCcccccchheeeecCCCCceeeeeccc-ccceEEEEEe
Confidence 12233333322121 1222222222135789999999888765442 2233555543
|
|
| >PLN02454 triacylglycerol lipase | Back alignment and domain information |
|---|
Probab=81.56 E-value=2.2 Score=46.69 Aligned_cols=40 Identities=15% Similarity=0.119 Sum_probs=29.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
..+++.+.++.|+++.--.+-+|.+.|||+||.|+..++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4567788888888763222236999999999999988874
|
|
| >PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria | Back alignment and domain information |
|---|
Probab=81.45 E-value=4.1 Score=39.32 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc
Q psy2521 616 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ 655 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 655 (783)
+.+|...++ ... ....++.++|||||..+++.++.+
T Consensus 94 L~~f~~gl~---a~~-~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 94 LARFLDGLR---ATH-GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHhh---hhc-CCCCCEEEEEecchhHHHHHHhhh
Confidence 445555544 333 455699999999999999999877
|
Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates. |
| >PLN02633 palmitoyl protein thioesterase family protein | Back alignment and domain information |
|---|
Probab=81.29 E-value=27 Score=36.74 Aligned_cols=101 Identities=17% Similarity=0.061 Sum_probs=52.3
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcC-CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF-NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
.+.|+|| .||-......++ ...+.+++.+. |.-+.+..+ |.+ . +++ +-.+..+-+..+.+.|.+...
T Consensus 24 ~~~P~Vi-wHG~GD~c~~~g-~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~s---~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 24 VSVPFIM-LHGIGTQCSDAT-NANFTQLLTNLSGSPGFCLEI-GNG-V-----GDS---WLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCCeEE-ecCCCcccCCch-HHHHHHHHHhCCCCceEEEEE-CCC-c-----ccc---ceeCHHHHHHHHHHHHhhchh
Confidence 4566655 588544443332 22345555432 555555444 222 1 111 112222333333444443222
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCC--ceeEEEEc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPE--LYGAALIL 666 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~--lf~a~i~~ 666 (783)
.. +-+-++|+|.||++.=+++.+.|+ -.+-.|+.
T Consensus 92 l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 92 LS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred hh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 22 358999999999999888888776 24555544
|
|
| >PRK13615 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=81.24 E-value=1.1e+02 Score=35.31 Aligned_cols=166 Identities=13% Similarity=0.098 Sum_probs=84.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
...+++|+||+.+|+... . ..+++-...+.. ...........++|.++| .++-.. +. .
T Consensus 336 ~~s~avS~dg~~~A~v~~---~--~~l~vg~~~~~~--~~~~~~~~Lt~PS~d~~g-~vWtv~-~g-------------~ 393 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA---S--GVWSVGDGDRDA--VLLDTRPGLVAPSLDAQG-YVWSTP-AS-------------D 393 (557)
T ss_pred cccceEcCCCceEEEEcC---C--ceEEEecCCCcc--eeeccCCccccCcCcCCC-CEEEEe-CC-------------C
Confidence 467899999999999843 1 357776554222 122333335788998887 454222 11 1
Q ss_pred CceEEEEEcCCCCCCceeE-EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEEC--CCCCCCcccCCCCceeee
Q psy2521 291 GQKIYYHVLGTEQDKDIPV-VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDL--HSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v-~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl--~~g~~~~l~~~~~~~~l~ 367 (783)
...+.+ .+.. .+...+ ..... ..-+..+.+|+||-.+++....+ +...|++.-+ .++....+. ...+.+.
T Consensus 394 ~~~l~~--~~~~-G~~~~v~v~~~~-~~~I~~lrvSrDG~R~Avi~~~~-g~~~V~va~V~R~~~~P~~L~--~~p~~l~ 466 (557)
T PRK13615 394 PRGLVA--WGPD-GVGHPVAVSWTA-TGRVVSLEVARDGARVLVQLETG-AGPQLLVASIVRDGGVPTSLT--TTPLELL 466 (557)
T ss_pred ceEEEE--ecCC-CceEEeeccccC-CCeeEEEEeCCCccEEEEEEecC-CCCEEEEEEEEeCCCcceEee--eccEEcc
Confidence 122222 1111 111111 11111 12356889999999998887542 3356776433 221111110 1122222
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
.....-.. .|..+ ..|.+++.....+..++.+.+.++.
T Consensus 467 ~~l~~v~sl~W~~~-~~laVl~~~~~~~~~v~~v~v~g~~ 505 (557)
T PRK13615 467 ASPGTPLDATWVDE-LDVATLTLAPDGERQVELHQVGGPS 505 (557)
T ss_pred cCcCcceeeEEcCC-CEEEEEeccCCCCceEEEEECCCcc
Confidence 22221122 37655 5577776444455668888887654
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=81.02 E-value=21 Score=37.37 Aligned_cols=192 Identities=15% Similarity=0.146 Sum_probs=100.6
Q ss_pred eCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcE
Q psy2521 264 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 343 (783)
Q Consensus 264 pDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~ 343 (783)
...+++|...+++..- ....+.+.|..|+..+-.-.. .++... +. -...--|.| ++++ +++.+.
T Consensus 195 e~skgVYClQYDD~ki------VSGlrDnTikiWD~n~~~c~~-~L~GHt---GS--VLCLqyd~r-viis---GSSDsT 258 (499)
T KOG0281|consen 195 ENSKGVYCLQYDDEKI------VSGLRDNTIKIWDKNSLECLK-ILTGHT---GS--VLCLQYDER-VIVS---GSSDST 258 (499)
T ss_pred ccCCceEEEEecchhh------hcccccCceEEeccccHHHHH-hhhcCC---Cc--EEeeeccce-EEEe---cCCCce
Confidence 3678888888876421 112345567677655432111 122211 11 123344666 3333 234478
Q ss_pred EEEEECCCCCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceE
Q psy2521 344 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 422 (783)
Q Consensus 344 l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l 422 (783)
+.++|..+|+ +...++..-++... .|+ . + ..+.+.++ ..+..+|++.+.....+.++-.. ...+
T Consensus 259 vrvWDv~tge--------~l~tlihHceaVLhlrf~-n-g-~mvtcSkD---rsiaVWdm~sps~it~rrVLvGH-rAaV 323 (499)
T KOG0281|consen 259 VRVWDVNTGE--------PLNTLIHHCEAVLHLRFS-N-G-YMVTCSKD---RSIAVWDMASPTDITLRRVLVGH-RAAV 323 (499)
T ss_pred EEEEeccCCc--------hhhHHhhhcceeEEEEEe-C-C-EEEEecCC---ceeEEEeccCchHHHHHHHHhhh-hhhe
Confidence 9999999863 23334443344333 243 2 2 33344443 24667777665422222222222 2344
Q ss_pred EEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 423 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 423 ~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+.+.+ + ++++...| ..|.+|+..+++.++.|......+ .+-.-.+.+.++-+|.+ ++-.+|+
T Consensus 324 NvVdfd~-k-yIVsASgD--RTikvW~~st~efvRtl~gHkRGI---AClQYr~rlvVSGSSDn---tIRlwdi 387 (499)
T KOG0281|consen 324 NVVDFDD-K-YIVSASGD--RTIKVWSTSTCEFVRTLNGHKRGI---ACLQYRDRLVVSGSSDN---TIRLWDI 387 (499)
T ss_pred eeecccc-c-eEEEecCC--ceEEEEeccceeeehhhhcccccc---eehhccCeEEEecCCCc---eEEEEec
Confidence 4444433 4 44444433 568999998899888886653333 23333467888877765 6778888
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=80.62 E-value=20 Score=36.79 Aligned_cols=106 Identities=14% Similarity=0.153 Sum_probs=70.7
Q ss_pred CcEEEeeEEECC--CCcEEEEEEecCCCceEEEEEEECCCCcccccccccc---ccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 207 GTTALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV---KFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 207 g~~~l~~~~~SP--DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~---~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
+...+.+-+||| ||..+|-..+ .+++.+|+.|.... ..++++ ..-.+.+.|+-+.++.+.-|
T Consensus 169 ~~~~ftsg~WspHHdgnqv~tt~d------~tl~~~D~RT~~~~-~sI~dAHgq~vrdlDfNpnkq~~lvt~gD------ 235 (370)
T KOG1007|consen 169 MRHSFTSGAWSPHHDGNQVATTSD------STLQFWDLRTMKKN-NSIEDAHGQRVRDLDFNPNKQHILVTCGD------ 235 (370)
T ss_pred ccceecccccCCCCccceEEEeCC------CcEEEEEccchhhh-cchhhhhcceeeeccCCCCceEEEEEcCC------
Confidence 456677888888 9999887643 57999999875432 122222 23467788887777666532
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
...|.+|+..... ..|++.+++..|...+.+.|--..|+++.+.
T Consensus 236 ---------dgyvriWD~R~tk---~pv~el~~HsHWvW~VRfn~~hdqLiLs~~S 279 (370)
T KOG1007|consen 236 ---------DGYVRIWDTRKTK---FPVQELPGHSHWVWAVRFNPEHDQLILSGGS 279 (370)
T ss_pred ---------CccEEEEeccCCC---ccccccCCCceEEEEEEecCccceEEEecCC
Confidence 2356667654332 2466777777788889999998888887543
|
|
| >PLN02517 phosphatidylcholine-sterol O-acyltransferase | Back alignment and domain information |
|---|
Probab=80.51 E-value=2.7 Score=47.77 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=49.3
Q ss_pred HHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc-CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 576 SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL-KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 576 ~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~-~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
.+...|+..||. --|++| -+-+|+.+.... ....-|..+...+|.+.+. ..-+||.|+||||||+++...+.
T Consensus 160 kLIe~L~~iGY~--~~nL~g---APYDWRls~~~le~rd~YF~rLK~lIE~ay~~--nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 160 VLIANLARIGYE--EKNMYM---AAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT--NGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred HHHHHHHHcCCC--CCceee---cccccccCccchhhhhHHHHHHHHHHHHHHHH--cCCCeEEEEEeCCchHHHHHHHH
Confidence 455667778997 567777 555677663322 2234456666777766543 22469999999999999998776
Q ss_pred c
Q psy2521 655 Q 655 (783)
Q Consensus 655 ~ 655 (783)
.
T Consensus 233 w 233 (642)
T PLN02517 233 W 233 (642)
T ss_pred h
Confidence 3
|
|
| >KOG1230|consensus | Back alignment and domain information |
|---|
Probab=80.22 E-value=56 Score=35.47 Aligned_cols=159 Identities=14% Similarity=0.114 Sum_probs=91.0
Q ss_pred eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEe---cCCC---ceEEEEEEECCCCccccccccc
Q psy2521 181 HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS---KSGS---DWNTLHIKDVDTGKDYPEVLKN 254 (783)
Q Consensus 181 ~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~---~~G~---d~~~i~v~Dl~tg~~~~~~~~~ 254 (783)
+..||+.+....+|+.+.-||.-.+.. -..+..-|.|..+.|.-. .++. ...++|++|+.+.+..++...+
T Consensus 97 YndLy~Yn~k~~eWkk~~spn~P~pRs---shq~va~~s~~l~~fGGEfaSPnq~qF~HYkD~W~fd~~trkweql~~~g 173 (521)
T KOG1230|consen 97 YNDLYSYNTKKNEWKKVVSPNAPPPRS---SHQAVAVPSNILWLFGGEFASPNQEQFHHYKDLWLFDLKTRKWEQLEFGG 173 (521)
T ss_pred eeeeeEEeccccceeEeccCCCcCCCc---cceeEEeccCeEEEeccccCCcchhhhhhhhheeeeeeccchheeeccCC
Confidence 456788777777889888888654331 112334466644444311 1111 1247999999998876655443
Q ss_pred c-----ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCC
Q psy2521 255 V-----KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCG 328 (783)
Q Consensus 255 ~-----~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDG 328 (783)
+ ..--++| -.+-|+|..+.+... +..+.+.||..+|.+-+-...-.-. .|. +.....+..+|+|
T Consensus 174 ~PS~RSGHRMvaw--K~~lilFGGFhd~nr-------~y~YyNDvy~FdLdtykW~Klepsga~Pt-pRSGcq~~vtpqg 243 (521)
T KOG1230|consen 174 GPSPRSGHRMVAW--KRQLILFGGFHDSNR-------DYIYYNDVYAFDLDTYKWSKLEPSGAGPT-PRSGCQFSVTPQG 243 (521)
T ss_pred CCCCCccceeEEe--eeeEEEEcceecCCC-------ceEEeeeeEEEeccceeeeeccCCCCCCC-CCCcceEEecCCC
Confidence 2 1124677 356777777665311 2244567888888764322111100 122 2233567789999
Q ss_pred cEEEEEEec----------CCCCcEEEEEECCCC
Q psy2521 329 RYLLVSTSN----------NTQGSDLHYFDLHSL 352 (783)
Q Consensus 329 k~l~~~~~~----------~~~~~~l~~~dl~~g 352 (783)
.-+++-... +...+++|+++..+|
T Consensus 244 ~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~ 277 (521)
T KOG1230|consen 244 GIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDG 277 (521)
T ss_pred cEEEEcchhHhhhhhhhhcCceeeeeeeecCCcC
Confidence 988875432 222388999998875
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 783 | ||||
| 3ddu_A | 709 | Prolyl Oligopeptidase With Gsk552 Length = 709 | 0.0 | ||
| 1qfm_A | 710 | Prolyl Oligopeptidase From Porcine Muscle Length = | 0.0 | ||
| 1qfs_A | 710 | Prolyl Oligopeptidase From Porcine Muscle With Cova | 0.0 | ||
| 1h2x_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Y473f Mut | 0.0 | ||
| 1o6g_A | 710 | Prolyl Oligopeptidase From Porcine Brain, D641n Mut | 0.0 | ||
| 1vz3_A | 710 | Prolyl Oligopeptidase From Porcine Brain, T597c Mut | 0.0 | ||
| 1e5t_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Mutant Le | 0.0 | ||
| 1vz2_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Y73c/v427 | 0.0 | ||
| 1e8m_A | 710 | Prolyl Oligopeptidase From Porcine Brain, Mutant, C | 0.0 | ||
| 1o6f_A | 710 | Prolyl Oligopeptidase From Porcine Brain, D641a Mut | 0.0 | ||
| 4ax4_A | 710 | Prolyl Oligopeptidase From Porcine Brain, H680a Mut | 0.0 | ||
| 3iun_A | 693 | Appep_d622n Opened State Length = 693 | 1e-121 | ||
| 3iuj_A | 693 | Appep_wt2 Opened State Length = 693 | 1e-119 | ||
| 3mun_A | 693 | Appep_pepclose Closed State Length = 693 | 1e-119 | ||
| 3ivm_A | 693 | Appep_wt+pp Closed State Length = 693 | 1e-119 | ||
| 2bkl_A | 695 | Structural And Mechanistic Analysis Of Two Prolyl E | 1e-107 | ||
| 1yr2_A | 741 | Structural And Mechanistic Analysis Of Two Prolyl E | 1e-105 | ||
| 4hvt_A | 711 | Structure Of A Post-Proline Cleaving Enzyme From Ri | 3e-36 | ||
| 2xe4_A | 751 | Structure Of Oligopeptidase B From Leishmania Major | 3e-33 |
| >pdb|3DDU|A Chain A, Prolyl Oligopeptidase With Gsk552 Length = 709 | Back alignment and structure |
|
| >pdb|1QFM|A Chain A, Prolyl Oligopeptidase From Porcine Muscle Length = 710 | Back alignment and structure |
|
| >pdb|1QFS|A Chain A, Prolyl Oligopeptidase From Porcine Muscle With Covalently Bound Inhibitor Z-Pro-Prolinal Length = 710 | Back alignment and structure |
|
| >pdb|1H2X|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y473f Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1O6G|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641n Mutant With Bound Peptide Ligand Suc-Gly-Pro Length = 710 | Back alignment and structure |
|
| >pdb|1VZ3|A Chain A, Prolyl Oligopeptidase From Porcine Brain, T597c Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1E5T|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1VZ2|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Y73c/v427c/c255t Mutant Length = 710 | Back alignment and structure |
|
| >pdb|1E8M|A Chain A, Prolyl Oligopeptidase From Porcine Brain, Mutant, Complexed With Inhibitor Length = 710 | Back alignment and structure |
|
| >pdb|1O6F|A Chain A, Prolyl Oligopeptidase From Porcine Brain, D641a Mutant With Bound Peptide Ligand Suc-Gly-Pro Length = 710 | Back alignment and structure |
|
| >pdb|4AX4|A Chain A, Prolyl Oligopeptidase From Porcine Brain, H680a Mutant Length = 710 | Back alignment and structure |
|
| >pdb|3IUN|A Chain A, Appep_d622n Opened State Length = 693 | Back alignment and structure |
|
| >pdb|3IUJ|A Chain A, Appep_wt2 Opened State Length = 693 | Back alignment and structure |
|
| >pdb|3MUN|A Chain A, Appep_pepclose Closed State Length = 693 | Back alignment and structure |
|
| >pdb|3IVM|A Chain A, Appep_wt+pp Closed State Length = 693 | Back alignment and structure |
|
| >pdb|2BKL|A Chain A, Structural And Mechanistic Analysis Of Two Prolyl Endopeptidases: Role Of Inter-Domain Dynamics In Catalysis And Specificity Length = 695 | Back alignment and structure |
|
| >pdb|1YR2|A Chain A, Structural And Mechanistic Analysis Of Two Prolyl Endopeptidases: Role Of Inter-Domain Dynamics In Catalysis And Specificity Length = 741 | Back alignment and structure |
|
| >pdb|4HVT|A Chain A, Structure Of A Post-Proline Cleaving Enzyme From Rickettsia Typhi Length = 711 | Back alignment and structure |
|
| >pdb|2XE4|A Chain A, Structure Of Oligopeptidase B From Leishmania Major Length = 751 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 783 | |||
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 0.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 0.0 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 0.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 0.0 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 0.0 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 4e-26 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 7e-26 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 4e-17 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 3e-15 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 3e-15 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 7e-12 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 2e-11 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 3e-11 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 1e-10 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 4e-10 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 2e-09 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 3e-09 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 6e-09 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 4e-08 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 6e-08 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 6e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 2e-07 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 6e-07 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 9e-07 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 1e-06 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 2e-06 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 1e-05 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 3e-05 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 4e-05 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 4e-05 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 7e-05 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 1e-04 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 2e-04 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 5e-04 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 8e-04 |
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* Length = 710 | Back alignment and structure |
|---|
Score = 846 bits (2189), Expect = 0.0
Identities = 320/720 (44%), Positives = 447/720 (62%), Gaps = 42/720 (5%)
Query: 55 PYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIK 114
YP V +DET DYHG K+ DPY WLE P +T+ F QN I+ P+
Sbjct: 5 QYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPF----------- 53
Query: 115 EQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFH 174
+ R KE++ + +Y KYS ++ YFYF+
Sbjct: 54 -----LEQCP------------------IRGLYKERMTELYDYPKYSCHFKKGKRYFYFY 90
Query: 175 NKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDW 234
N GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 91 NTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDW 150
Query: 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+
Sbjct: 151 VTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL 210
Query: 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG-SDLHYFDLHSLP 353
YYHVLGT+Q +DI EFP+ +E++D GRY+L+S + L Y DL
Sbjct: 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ-E 269
Query: 354 DGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413
I+G +I + ++ + N G KT +++P +++ I+ +P E WK L
Sbjct: 270 SNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVL 329
Query: 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473
+PE E L+ VA V +N L++ Y+ +V++ + LHDL TG L FPL++G + SG++
Sbjct: 330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQK 389
Query: 474 KYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRS 533
K E+FY FTSFL PG IYHC++ +++ +P +FRE V + + +QT Q+++ S
Sbjct: 390 KDTEIFYQFTSFLSPGIIYHCDL-----TKEELEPRVFREVTVKGIDASDYQTVQIFYPS 444
Query: 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI 593
KDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F+RH G+ A+ NI
Sbjct: 445 KDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANI 504
Query: 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
RGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI GGSNGGLLV C
Sbjct: 505 RGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCA 564
Query: 654 NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP 713
NQRP+L+G + VG +DML+F+K+TI + +++G ++K HF L+ YSPLHN+K+P
Sbjct: 565 NQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPE 624
Query: 714 N-NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
+ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL+ V+ AGHG GK
Sbjct: 625 ADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGK 684
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} Length = 695 | Back alignment and structure |
|---|
Score = 771 bits (1994), Expect = 0.0
Identities = 236/719 (32%), Positives = 366/719 (50%), Gaps = 68/719 (9%)
Query: 56 YPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKE 115
YP R ++ V D HG+++ DPYRWLE E Q + QN +
Sbjct: 3 YPATRAEQVV-DTLHGVQVADPYRWLEDEKAPEVQTWMTAQNAHAREA------------ 49
Query: 116 QLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHN 175
+A + REA+ + + + S P R+ +FY
Sbjct: 50 ----LAKFP------------------GREALAARFKELFYTDSVSTPSRRNGRFFYVRT 87
Query: 176 KGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWN 235
+ +ILY ++ +G +V LDPN SKDGT +L +A S +GK A+ + +D
Sbjct: 88 HKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEA 147
Query: 236 TLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294
LH+ DVD+G+ +V++ K+ + WT D KGF+Y I
Sbjct: 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSI---KVDERPGYTTI 204
Query: 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354
YH LGTE KD V E + L S+++ G+YL V +D+++
Sbjct: 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP----- 259
Query: 355 GKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414
G+ + ++ G+ +E+ V T + AP+ +V ++ P +WK ++
Sbjct: 260 ----GEKDFRLLVKGVGAKYEV-HAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314
Query: 415 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRR 473
PED + +L V+ V L + Y+++ S + + L GK + + L +G +++ G
Sbjct: 315 PEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL-KGKPVRTVQLPGVGAASNLMGLE 372
Query: 474 KYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRS 533
++ +Y FTSF P IY ++ K ++ + VP P +Q +QV++ S
Sbjct: 373 DLDDAYYVFTSFTTPRQIYKTSV-------STGKSELWAKVDVP-MNPEQYQVEQVFYAS 424
Query: 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI 593
KDGT+VPM+++HR R+ P ++YGYGG+ V++ F S +L G+YA+ N+
Sbjct: 425 KDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWL-DAGGVYAVANL 483
Query: 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
RGGGE G+ WH+AGRL KKQN FDDF AAAEY++ +KYT+PK + I GGSNGGLLVGA +
Sbjct: 484 RGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAM 543
Query: 654 NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP 713
QRPELYGA + V LDM+R++ F E+G+ F L +YSP H+++
Sbjct: 544 TQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVR--- 600
Query: 714 NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
+ +YPA L++ DHDDRV P+H+ KF+A +Q G+ LLR+E +AGHG
Sbjct: 601 PDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGN----PATALLRIEANAGHGGAD 655
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* Length = 693 | Back alignment and structure |
|---|
Score = 770 bits (1992), Expect = 0.0
Identities = 264/727 (36%), Positives = 388/727 (53%), Gaps = 68/727 (9%)
Query: 55 PYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIK 114
YP R+ E V D Y G + DPYRWLE ET+ + QN ++ Y
Sbjct: 11 HYPVTRQGEQV-DHYFGQAVADPYRWLEDDRSPETEAWVKAQNAVTQDY----------- 58
Query: 115 EQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFH 174
+A R AIKE+L NY K AP R+ +++F
Sbjct: 59 -----LAQIP------------------YRAAIKEKLAASWNYAKEGAPFREGRYHYFFK 95
Query: 175 NKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDW 234
N GLQN ++L+ Q+ EVFLDPN LS DGTTAL +FS +G+ AY LS +GSDW
Sbjct: 96 NDGLQNQNVLWRQQE-GKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDW 154
Query: 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294
+H+ DV++ + LK+VKF ISW + +GFFY+ Y +G + K+
Sbjct: 155 REIHLMDVESKQPLETPLKDVKFSGISWLGN-EGFFYSSYDKPDG---SELSARTDQHKV 210
Query: 295 YYHVLGTEQDKDIPVV-EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 353
Y+H LGT Q+ D V P + + VT+ R+LL+S +N+T G+ L+ DL
Sbjct: 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ-E 269
Query: 354 DGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413
+ PL TV +D ++ N G L + T ++AP ++VT++ NP +W+ L
Sbjct: 270 NA------PLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL 323
Query: 414 IPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473
IPE + L V + L Y+ + + ++ D + LG ++ +G+
Sbjct: 324 IPERQQ-VLTV--HSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKH 380
Query: 474 KYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRS 533
+++GF ++ QP T+Y +++R + P F+P + ++Q +++S
Sbjct: 381 DDPALYFGFENYAQPPTLYRFEP-------KSGAISLYRASAAP-FKPEDYVSEQRFYQS 432
Query: 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI 593
KDGTRVP+ I +R G + NP I+YGYGG+ VS+ P+FS+S +L G+YA+ N+
Sbjct: 433 KDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWL-DLGGVYAVANL 491
Query: 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
RGGGE G+ WH AG KQN FDDF AAAEY+ + YT+ + I GGSNGGLLVGA +
Sbjct: 492 RGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVM 551
Query: 654 NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP-NNKTHFHNLLSYSPLHNIKVP 712
QRP+L AL VG LDMLR++ FT ++G+ +++ F L YSPLHN++
Sbjct: 552 TQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVR-- 609
Query: 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
YP+T+V T DHDDRV P HS+KF ATLQ +P L+R+E +AGHG G
Sbjct: 610 -PGVSYPSTMVTTADHDDRVVPAHSFKFAATLQA----DNAGPHPQLIRIETNAGHGAGT 664
Query: 773 ALDIELK 779
+ ++
Sbjct: 665 PVAKLIE 671
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} Length = 741 | Back alignment and structure |
|---|
Score = 765 bits (1979), Expect = 0.0
Identities = 237/750 (31%), Positives = 372/750 (49%), Gaps = 75/750 (10%)
Query: 30 ASSSMSCESGPHPSEERAEKVEFTGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAET 89
A+ ++ P ++++A YP + V +D+ G K+ DP+RWLE +
Sbjct: 16 ATPVAFAQTPPTLAKDQAMPSLPP--YPASPQVPLV-EDHFGEKVSDPWRWLEADVRTDA 72
Query: 90 QIFNFM--QNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAI 147
++ ++ Q+ + Y + +R A+
Sbjct: 73 KVAAWVQAQSAYTAAY----------------LKQLP------------------ERAAL 98
Query: 148 KEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQR---NLTGSTEVFLDPNKLS 204
++++ + +YE++ PQR+ + FY N GL N S L V+ + V LDPN +
Sbjct: 99 EKRMKALIDYERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWA 158
Query: 205 KDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTH 264
KDG TAL +A SD+G+ AY + GSDW T+ V GK + LK VKF ++W
Sbjct: 159 KDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLG 218
Query: 265 DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV 324
+ Y+++ + + Q ++ H LGT Q D PV P G + V
Sbjct: 219 N-DALLYSRFAE--PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASV 275
Query: 325 TDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPE 383
+ GR++++++S T + +H + + G P+ +IP + + + G +
Sbjct: 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIG------PVTALIPDLKAQWDFVDGVGDQ 329
Query: 384 LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443
L + AP K+V ++L+ + T++PE ++ V +A N+L YI + +S
Sbjct: 330 LWFVSGDGAPLKKIVRVDLSGS-TPRFDTVVPESKDNLESV--GIAGNRLFASYIHDAKS 386
Query: 444 VMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITD 502
+ DL+ GK + L +G + +SGR + F+SF QP T+ +
Sbjct: 387 QVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP------ 439
Query: 503 QDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGY 562
K T + + F+P F+ +QV++ SKDGT+VPM+I+ R A P ++YGY
Sbjct: 440 -ATAKTTPWEPVHLT-FDPADFRVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGY 495
Query: 563 GGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA 622
GG+ V++ P FS ++ G +A+ N+RGGGE G+ WH+AGR KKQN FDDF AA
Sbjct: 496 GGFNVALTPWFSAGFMTWIDSG-GAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAA 554
Query: 623 AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 682
E++I T + I GGSNGGLL+GA NQRP+L+ AA VG +DMLRF++FT
Sbjct: 555 GEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGR 614
Query: 683 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIA 742
Y ++G P + + L YSP HN++ + YPA LV T D DDRV P HS+K+ A
Sbjct: 615 YWVDDYGYPEKEADWRVLRRYSPYHNVR---SGVDYPAILVTTADTDDRVVPGHSFKYTA 671
Query: 743 TLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
LQ P L+R+E AGHG GK
Sbjct: 672 ALQT----AAIGPKPHLIRIETRAGHGSGK 697
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} Length = 751 | Back alignment and structure |
|---|
Score = 639 bits (1651), Expect = 0.0
Identities = 162/776 (20%), Positives = 299/776 (38%), Gaps = 104/776 (13%)
Query: 30 ASSSMSCESGPHPSEE--RAEKVEFTGPYPKVR-KDETVEDDYHGMKIKDPYRWLEYPHC 86
S MS +S S + A K V +D +DPY W+
Sbjct: 17 RGSHMSSDSSVAASAQPPIAAKKPHRVTLGYVEGEDRGPNPMNPPRYREDPYFWMRDDDR 76
Query: 87 AETQIFNFM--QNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDR 144
+ + + + A+ + R
Sbjct: 77 KDPAVIEHLNKEKVYFQAR----------------SADIAQL-----------------R 103
Query: 145 EAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQR-----NLTGSTEVFLD 199
+ I + + N + SAP +Y + + I + EV +D
Sbjct: 104 DDIYAEHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIID 163
Query: 200 PNKLSKDGT--TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLKNVK 256
N++++ +++ A+ + SG++ T+ K + + + +
Sbjct: 164 VNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT- 222
Query: 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR 316
I W DH FY ET K++ HV+G Q +D+ + E N
Sbjct: 223 NGEIVWGPDHTSLFYVTK---------DET--LRENKVWRHVMGKLQSEDVCLYEEHNPL 271
Query: 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE 375
L + S + + +++H DL K + L+ V P ++
Sbjct: 272 -FSAFMYKAADTNTLCIG-SQSPETAEVHLLDLR-----KGNAHNTLEIVRPREKGVRYD 324
Query: 376 IIANNGPELIVKTTKN-APKGKVVTINLNNPCEKNWKT-LIPEDENRTLDVVAAVANNKL 433
+ + L++ T + A K++ P +W L+ E+ ++ +A +N L
Sbjct: 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQP--SDWSHVLVDHSEDVFMESIAVR-SNYL 381
Query: 434 IVHYIQNVRSVMDLHDLNT-------GKRLHSFPLD-----LGQITHISGRRKYNEVFYG 481
+V + + + ++ G L ++ + + +
Sbjct: 382 VVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRME 441
Query: 482 FTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVP-EFEPTLFQTKQVYFRSKDGTRVP 540
++S P T + + D T + V F+ ++ ++ + + D T++P
Sbjct: 442 YSSLATPNTWFDVSP-------QDHSRTAVKVREVGGGFDAANYKVERRFATAPDQTKIP 494
Query: 541 MYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600
+ +++ ++ P ++YGYG YG+S+ P FSI + I+AI +IRGG ELG
Sbjct: 495 LSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCDR-GMIFAIAHIRGGSELG 553
Query: 601 EDWHNAG-RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659
W+ G + L K+N F DF AAAE+++N K T P + G S GGLL+GA LN RP+L
Sbjct: 554 RAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDL 613
Query: 660 YGAALILVGALDMLRFN---KFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT 716
+ AL V +D++ + E+G+PN ++ +LSYSP+ N++
Sbjct: 614 FKVALAGVPFVDVMTTMCDPSIPLTTGEWEEWGNPNEYKYYDYMLSYSPMDNVR----AQ 669
Query: 717 QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772
+YP +V G HD RV K+++ L+E N +LL ++ ++GH K
Sbjct: 670 EYPNIMVQCGLHDPRVAYWEPAKWVSKLRECKT----DNNEILLNIDMESGHFSAK 721
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A Length = 582 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 4e-26
Identities = 96/607 (15%), Positives = 184/607 (30%), Gaps = 105/607 (17%)
Query: 183 ILYVQRNLTGSTEVFL----DPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238
+L V GS +L + KL+ L G+ G++ + L
Sbjct: 36 LLVVG-FSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVGRVILVRDVSKGAEQHALF 93
Query: 239 IKDVDTGKDYPEVLKNVKFPSI-SWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYH 297
+ + + L+ VK I S + + T D + +
Sbjct: 94 KVNTSRPGE-EQRLEAVKPMRILSGVDTGEAVVF-----TGATEDR----------VALY 137
Query: 298 VLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357
L ++ + P G G + L +L S
Sbjct: 138 ALDGGGLRE--LARLP-----GFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS------ 184
Query: 358 SGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 417
G + G I ++ + A + ++VT++ + + + L
Sbjct: 185 -GGLRVFDSGEGSFSSASISPGM--KVTA-GLETAREARLVTVDPRD---GSVEDLELPS 237
Query: 418 ENRT------LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471
++ + + + + + +L V + RS + + G +
Sbjct: 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFIDG-------ERVEAPQGNHGRVVL 290
Query: 472 RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEP-TLFQTKQVY 530
R ++ TS P I +P E +PE ++ ++ V+
Sbjct: 291 WR--GKLVTSHTSLSTPPRIV---------SLPSGEPL--LEGGLPEDLRRSIAGSRLVW 337
Query: 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAI 590
S DG+RVP Y++ A P ++ +GG ++ G + +
Sbjct: 338 VESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWDTFAASLAAA--G-FHV 392
Query: 591 --PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLL 648
PN RG GE+W +D AAA + + IMG S GG +
Sbjct: 393 VMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASE--LYIMGYSYGGYM 450
Query: 649 VGACLNQRPELYGAALILVGALDMLRFNKFT---IAYYSESEFGSPNNKTHFHNLLSYSP 705
L +P L+ A + +D + + + E G + S SP
Sbjct: 451 TLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREI-----MRSRSP 505
Query: 706 LH---NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762
++ IK P ++ + R P + + L + ++ +
Sbjct: 506 INHVDRIKEP--------LALIHPQNASRTPLKPLLRLMGELLAR--GKTFE----AHII 551
Query: 763 EQDAGHG 769
DAGH
Sbjct: 552 P-DAGHA 557
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A Length = 662 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 7e-26
Identities = 61/362 (16%), Positives = 107/362 (29%), Gaps = 54/362 (14%)
Query: 427 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGF-TSF 485
A N LI +V+ + D +G+ + + G S
Sbjct: 300 APLANGLIAVVHGKGAAVLGILDPESGELV---DAAGPWTEWAATLTVSGTRAVGVAASP 356
Query: 486 LQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF-QTKQVYFRSKDGTRVPMYII 544
+ D + +P + + + F + DG + +I
Sbjct: 357 RTAYEVVEL-------DTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHIY 409
Query: 545 ----HRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--F--NGIYAI--PNIR 594
+ P ++ +GG PT + + L F G + N
Sbjct: 410 PPHSPDFTGPADELPPYVVMAHGG------PTSRVPAVLDLDVAYFTSRG-IGVADVNYG 462
Query: 595 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN 654
G G + R +D A A + + + + GGS GG + L
Sbjct: 463 GSTGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLV 522
Query: 655 QRPELYGAALILVGALDMLRFNKFTI----AYYSESEFGSPNNKTHFHNLLSYSPLH--- 707
++Y +L LD+L + + Y + GS +PL
Sbjct: 523 S-TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEFPER--YRDRAPLTRAD 579
Query: 708 NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAG 767
++VP L+L G D PP +F+ + +P+ L E G
Sbjct: 580 RVRVP--------FLLLQGLEDPVCPPEQCDRFLEAVAGC--GVPHA----YLSFE-GEG 624
Query: 768 HG 769
HG
Sbjct: 625 HG 626
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} Length = 290 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 4e-17
Identities = 35/252 (13%), Positives = 70/252 (27%), Gaps = 44/252 (17%)
Query: 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFL-RH 583
+ + + ++ G P +++ +G S + R
Sbjct: 5 KLSSIEIPV-GQDELSGTLLTPTGM------PGVLFVHGW-------GGSQHHSLVRARE 50
Query: 584 FNGI-YAI--PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIM 640
G+ ++RG + R DD +AA + + + Y I ++
Sbjct: 51 AVGLGCICMTFDLRGHEGYASMRQSVTR----AQNLDDIKAAYDQLASLPYVDAHSIAVV 106
Query: 641 GGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNL 700
G S GG L +RP AL +++ ++ ++ + +
Sbjct: 107 GLSYGGYLSALLTRERPV-EWLALRSPALYKDAHWDQPKVSLNADPDLMDYRRR--ALAP 163
Query: 701 LSYSPLH---NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757
L K L++ ++D VP +
Sbjct: 164 GDNLALAACAQYKGD--------VLLVEAENDVIVPHPVMRNYADAFT--------NARS 207
Query: 758 LLLRVEQDAGHG 769
L RV A H
Sbjct: 208 LTSRVIAGADHA 219
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* Length = 318 | Back alignment and structure |
|---|
Score = 76.7 bits (189), Expect = 3e-15
Identities = 50/296 (16%), Positives = 77/296 (26%), Gaps = 65/296 (21%)
Query: 517 PEFEPTLFQTKQ-----VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY--GYGG--YGV 567
P+ +P + + ++S R+ + +P I+ GY G
Sbjct: 42 PDLQPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKE---GPHPAIVKYHGYNASYDGE 98
Query: 568 SVLPTFSISRCMFLRHFNGIYAI--PNIRGGGELGED----------WHNAGRLLKKQN- 614
G YA +RG + W G L K
Sbjct: 99 IHEMVNWALH--------G-YATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYY 149
Query: 615 ---CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
+ D A E + + I + GGS GG L A A +
Sbjct: 150 YRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSN 209
Query: 672 MLRFNKFTIAYYSES------EFGSP-NNKTHFHNLLSYSPLH---NIKVPPNNTQYPAT 721
R + GSP L + ++ +KVP
Sbjct: 210 FERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVP--------V 261
Query: 722 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777
L+ G D PP + L + L+V + GH A E
Sbjct: 262 LMSIGLIDKVTPPSTVFAAYNHL----------ETKKELKVYRYFGHEYIPAFQTE 307
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} Length = 346 | Back alignment and structure |
|---|
Score = 76.8 bits (189), Expect = 3e-15
Identities = 46/288 (15%), Positives = 77/288 (26%), Gaps = 57/288 (19%)
Query: 518 EFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISR 577
F+ + + +YF G R+ I ++P +I +G S
Sbjct: 74 SFQVSFAECYDLYFTGVRGARIHAKYIKPKTE---GKHPALIRFHGYSSNSGDWND---- 126
Query: 578 CMFLRHFNGIYAI--PNIRGGGELGEDWHNAGR----------------LLKKQNCFDDF 619
G + + ++RG G +D + ++ F D
Sbjct: 127 -KLNYVAAG-FTVVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDT 184
Query: 620 QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679
A ++N + +MG S GG L AC P + D R
Sbjct: 185 AQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPRVRKVVSEYPFLSDYKRVWDLD 244
Query: 680 IAYYSESEFG---------SPNNKTHFHNLLSYSPLH---NIKVPPNNTQYPATLVLTGD 727
+A + E F L + IK L+ G
Sbjct: 245 LAKNAYQEITDYFRLFDPRHERENEVFTKLGYIDVKNLAKRIKGD--------VLMCVGL 296
Query: 728 HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALD 775
D PP + +Q ++V D GH +
Sbjct: 297 MDQVCPPSTVFAAYNNIQS----------KKDIKVYPDYGHEPMRGFG 334
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 Length = 386 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 7e-12
Identities = 47/248 (18%), Positives = 74/248 (29%), Gaps = 43/248 (17%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN 592
DG +P+Y+ G +P +I G S + A +
Sbjct: 135 DGIPMPVYVRIPEGP---GPHPAVIMLGGLESTK-----EESFQMENLVLDRGMATATFD 186
Query: 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652
G GE+ E AG + A + + + + I ++G S GG
Sbjct: 187 GPGQGEMFEYKRIAG------DYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKS 240
Query: 653 LNQRPELYGAALILVGAL-DMLRFNKFTIAYYSESEFGSPNNKT---HFHNLLSYSP--- 705
P L AA I G D+ ++ T ++ S + H +
Sbjct: 241 AACEPRL--AACISWGGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDV 298
Query: 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765
L I P T +L G D VP + + + L L VE+D
Sbjct: 299 LSQIACP--------TYILHGV-HDEVPLSFVDTVLELVPAE---------HLNLVVEKD 340
Query: 766 AGHGQGKA 773
H
Sbjct: 341 GDHCCHNL 348
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* Length = 337 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 2e-11
Identities = 47/287 (16%), Positives = 75/287 (26%), Gaps = 50/287 (17%)
Query: 517 PEFEPTLFQTKQ-----VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP 571
P FE K V F G R+ +++ V L + P ++ G G P
Sbjct: 54 PVFERMESHLKTVEAYDVTFSGYRGQRIKGWLL--VPKLEEEKLPCVVQYIGYNGGRGFP 111
Query: 572 ------------TFSI-SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ----N 614
F + +R G + G L +
Sbjct: 112 HDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRR 171
Query: 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674
F D A E + + I I GGS GG + A + + R
Sbjct: 172 VFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRR 231
Query: 675 FNKFT--IAYYSESEFGSPNNKTH---FHNLLSYSPLH---NIKVPPNNTQYPATLVLTG 726
+ Y + F + F L + ++ K+P L G
Sbjct: 232 AVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIP--------ALFSVG 283
Query: 727 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773
D+ PP + P +R+ H G +
Sbjct: 284 LMDNICPPSTVFAAYNYYAG----------PKEIRIYPYNNHEGGGS 320
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} Length = 422 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 3e-11
Identities = 38/264 (14%), Positives = 71/264 (26%), Gaps = 47/264 (17%)
Query: 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR 582
F V+ +S RV + G P II +G G R L
Sbjct: 129 HFLPPGVWRQSVRAGRVRATLFLPPGP---GPFPGIIDIFGIGG-----GLLEYRASLLA 180
Query: 583 HFNGIYAI-PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMG 641
+G + +L + N + F+ A YM+ K I ++G
Sbjct: 181 G-HGFATLALAYYNFEDLPNNMDNIS--------LEYFEEAVCYMLQHPQVKGPGIGLLG 231
Query: 642 GSNGGLLVGACLNQRPELYGAALILVGALDM----------LRFNKFTIAYYSESEFGSP 691
S G + + + + I + + + + + G
Sbjct: 232 ISLGADICLSMASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLV 291
Query: 692 NNKTHFHNLL------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQ 745
+ + L+ S P+ + P L++ G D + ++
Sbjct: 292 DIVDIRNALVGGYKNPSMIPIEKAQGP--------ILLIVGQDDHNWRSELYAQTVSERL 343
Query: 746 EKIGSLPYQKNPLLLRVEQDAGHG 769
+ G Q GH
Sbjct: 344 QAHGKEKPQI-----ICYPGTGHY 362
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 1e-10
Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 10/224 (4%)
Query: 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSIS-RCMFLRH 583
+K++ F + T+ +I ++++ P+++ Y G F ++
Sbjct: 473 SKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST 532
Query: 584 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGS 643
N I A + RG G G+ +A +D AA + K I I G S
Sbjct: 533 ENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWS 592
Query: 644 NGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY 703
GG + L ++ + + ++ + Y+E G P + + + +
Sbjct: 593 YGGYVTSMVLGSGSGVFKCGIAVAPVSR----WEYYDSVYTERYMGLPTPEDNLDHYRNS 648
Query: 704 SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747
+ + + N + L++ G DD V S + L +
Sbjct: 649 TVMSRAE----NFKQVEYLLIHGTADDNVHFQQSAQISKALVDV 688
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 4e-10
Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 10/215 (4%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSIS-RCMFLRHFNGIYAIPN 592
D + +I R+++ P++I YGG SV F+++ + A+ +
Sbjct: 476 DEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVD 535
Query: 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652
RG G+ A +D A I + K I I G S GG +
Sbjct: 536 GRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLA 595
Query: 653 LNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 712
L L+ + + ++ + Y+E G P + + + + + +
Sbjct: 596 LASGTGLFKCGIAVAPVSS----WEYYASVYTERFMGLPTKDDNLEHYKNSTVMARAE-- 649
Query: 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747
+ L++ G DD V +S + L
Sbjct: 650 --YFRNVDYLLIHGTADDNVHFQNSAQIAKALVNA 682
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 Length = 238 | Back alignment and structure |
|---|
Score = 57.8 bits (139), Expect = 2e-09
Identities = 31/232 (13%), Positives = 60/232 (25%), Gaps = 32/232 (13%)
Query: 544 IHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601
+ + + +++ G G +L + R F + + GE
Sbjct: 13 LSVLARIPEAPKALLLALHGLQGSKEHILA---LLPGYAERGFLLL--AFDAPRHGEREG 67
Query: 602 DWHNAGRLLK----KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP 657
++ + + A + + + GGS G + L +
Sbjct: 68 PPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGF 127
Query: 658 ELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ 717
G +G+ ++ + + P
Sbjct: 128 RPRGVL-AFIGSGFPMKL----------PQGQVVEDPGVLAL-YQAPPATR----GEAYG 171
Query: 718 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
L L G D VP K + L+ Y + L VE+ AGH
Sbjct: 172 GVPLLHLHGSRDHIVPLARMEKTLEALRPH-----YPEGRLARFVEEGAGHT 218
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A Length = 380 | Back alignment and structure |
|---|
Score = 58.9 bits (142), Expect = 3e-09
Identities = 60/375 (16%), Positives = 106/375 (28%), Gaps = 61/375 (16%)
Query: 384 LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443
LI K K V I + + L P+ + + ++ + Y N
Sbjct: 11 LITKVFPEGEKVCAVVIEYPVEIDG--QKLSPDQFSVKVKTGDTYSSRTITKVYANNSGG 68
Query: 444 VMDLHDLNTGKR--LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENIT 501
+ N GK L DL T + G N Q I+ + N
Sbjct: 69 LSFSIFNNRGKYVVLELSTEDLHSNTIVFGPNFLNTRMKLDYIVSQLVPIFDVD--GNEV 126
Query: 502 DQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHR-VGALRNRRNPVIIY 560
+ K T + I+ +F + + G +P Y + +R+ P++++
Sbjct: 127 EPFTSKQTDEKHLIIDDFL------AFTFKDPETGVEIP-YRLFVPKDVNPDRKYPLVVF 179
Query: 561 --GYGGYGVSVLPTFSISRC-------MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611
G G G + +R + P + +
Sbjct: 180 LHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFTDRENPFN 239
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671
+ ++++ I I G S GG + + PEL+ AA+ + G D
Sbjct: 240 PEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGD 299
Query: 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDR 731
+ S + IK P V + D
Sbjct: 300 V-------------------------------SKVERIKDIP-------IWVFHAEDDPV 321
Query: 732 VPPLHSYKFIATLQE 746
VP +S + L E
Sbjct: 322 VPVENSRVLVKKLAE 336
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} Length = 446 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 6e-09
Identities = 38/261 (14%), Positives = 70/261 (26%), Gaps = 48/261 (18%)
Query: 530 YFRSKDGTRVPMYIIHRVGAL----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN 585
YF R P+ + G L P I+ +G G R L
Sbjct: 145 YFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGG-----GLLEYRASLLAG-K 198
Query: 586 GIYAI-PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSN 644
G + +L + + F+ A Y+++ K + ++G S
Sbjct: 199 GFAVMALAYYNYEDLPKTMETLH--------LEYFEEAMNYLLSHPEVKGPGVGLLGISK 250
Query: 645 GGLLVGACLNQRPELYGAALILVGALDM----------LRFNKFTIAYYSESEFGSPNNK 694
GG L + + + A +I ++ L ++ G +
Sbjct: 251 GGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTKDGYADIV 310
Query: 695 THFHNLL------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748
++ L S+ P+ + L L G D +
Sbjct: 311 DVLNSPLEGPDQKSFIPVERAEST--------FLFLVGQDDHNWKSEFYANEACKRLQAH 362
Query: 749 GSLPYQKNPLLLRVEQDAGHG 769
G Q + + GH
Sbjct: 363 GRRKPQ-----IICYPETGHY 378
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 4e-08
Identities = 37/199 (18%), Positives = 66/199 (33%), Gaps = 23/199 (11%)
Query: 556 PVIIYGYGG-YGVSVLPTFSISRCMFLRHF--NGIYAIPNI--RGGGELGEDWHNAGRLL 610
PVI+Y YGG + V T+ S + + G YA+ + RG G +
Sbjct: 486 PVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKG-YAVFTVDSRGSANRGAAFEQVIHRR 544
Query: 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670
Q D +++ ++ + I + G S GG + + +++ + +
Sbjct: 545 LGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVI 604
Query: 671 DMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY---SPLHNIKVPPNNTQYPATLVLTGD 727
D Y E F +P N Y + L +++ G
Sbjct: 605 D----WNRYAIMYGERYFDAPQE-----NPEGYDAANLLKRAGDLKGR-----LMLIHGA 650
Query: 728 HDDRVPPLHSYKFIATLQE 746
D V HS F+ +
Sbjct: 651 IDPVVVWQHSLLFLDACVK 669
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} Length = 276 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 6e-08
Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 36/153 (23%)
Query: 622 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV-GALDMLRFNKFTI 680
E+ IN P+ + ++G S GG L N +IL
Sbjct: 111 HKEWQIN-----PEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSF-------- 157
Query: 681 AYYSESEFGSPNNKTHFH----NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 736
FG P++ +HF+ N+ Y+ + + P T + D+ VP +
Sbjct: 158 ------TFGWPSDLSHFNFEIENISEYNISEKV-----TSSTPPTFIWHTADDEGVPIYN 206
Query: 737 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
S K+ L + + P + HG
Sbjct: 207 SLKYCDRLSKH-------QVPFEAHFFESGPHG 232
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* Length = 251 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 43/255 (16%), Positives = 79/255 (30%), Gaps = 44/255 (17%)
Query: 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFLRHFNGI 587
+ DG ++ Y+ + P+ I G+ G+ ++ L G+
Sbjct: 4 MYIDCDGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIV-AVQE--TLNE-IGV 57
Query: 588 YAI-PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG 646
+ ++ G G+ + + L K + A +Y + I + G S GG
Sbjct: 58 ATLRADMYGHGKSDGKFEDHT-LFKWL---TNILAVVDYAKKLDFVTD--IYMAGHSQGG 111
Query: 647 LLVGACLNQRPELYGAALILVGA------------LDMLRFNKFTIAYYSESEFGSPNNK 694
L V ++ ALI + L L+F+ I ++ G
Sbjct: 112 LSVMLAAAMERDII-KALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKG 170
Query: 695 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754
+ + + P L++ GD D+ VP S F
Sbjct: 171 NYVRVAQTIRVEDFVD----KYTKP-VLIVHGDQDEAVPYEASVAFSKQY---------- 215
Query: 755 KNPLLLRVEQDAGHG 769
KN L+ + H
Sbjct: 216 KNCKLVTIP-GDTHC 229
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 55.2 bits (132), Expect = 7e-08
Identities = 54/386 (13%), Positives = 104/386 (26%), Gaps = 128/386 (33%)
Query: 430 NNKLIVHYIQNVRSVMDLHDLNTGKR--LHSFPLDLGQITHISGRR-KYNEVFYGFTSFL 486
++ + D D+ + L +D HI + + F + L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEID-----HIIMSKDAVSGTLRLFWTLL 72
Query: 487 -QPGTIYHCNIPENITDQDDFK---PTIFRETIVPEFEPTLFQTKQVYFRSK---DGTRV 539
+ + + E + ++K I E P ++ + R + D
Sbjct: 73 SKQEEMVQKFVEE--VLRINYKFLMSPIKTEQRQPSMMTRMY----IEQRDRLYNDNQVF 126
Query: 540 PMYIIHR---VGALRN-----RRNP-VIIYGYGGYGVSVLPTFSISRCMFLRHF-NGIYA 589
Y + R LR R V+I G G G + + I+
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF- 185
Query: 590 IPNIRGGGELGEDWHNAGR------LLKKQN--CFD---DFQAAAEYMINKKY------T 632
W N +L+ + ++ + +++ N K
Sbjct: 186 -------------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232
Query: 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR----FNKF--------TI 680
+ + + L +P Y L LV L ++ +N F T
Sbjct: 233 ELRRL---------------LKSKP--YENCL-LV--LLNVQNAKAWNAFNLSCKILLTT 272
Query: 681 AYYSESEFGSPNNKTHF---HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 737
+ ++F S TH H+ ++ +P L
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTP-------------DEVKSL------------- 306
Query: 738 YKFIATLQEKIGSLPYQK---NPLLL 760
+ L + LP + NP L
Sbjct: 307 --LLKYLDCRPQDLPREVLTTNPRRL 330
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.1 bits (129), Expect = 2e-07
Identities = 68/521 (13%), Positives = 143/521 (27%), Gaps = 165/521 (31%)
Query: 60 RKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLR 119
K E + + ++ Y++L + I + ++ +
Sbjct: 73 SKQEEMVQKFVEEVLRINYKFLM------SPI------------------KTEQRQPSMM 108
Query: 120 MANYEKYSAPHFGVSNPYCQNHTDREAIKEQL------LR---------MANYEK----- 159
Y + + + + + + R +L LR + K
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVAL 168
Query: 160 -----YSAPQRQENNYFYFHNKGLQN--HSILYVQRNLTGSTEVFLDPNKLSK-DGTTAL 211
Y + + F+ N N ++L + + L +DPN S+ D ++ +
Sbjct: 169 DVCLSYKVQCKMDFKIFWL-NLKNCNSPETVLEMLQKLL----YQIDPNWTSRSDHSSNI 223
Query: 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKG 268
KL ++ + K Y VL NV+ W
Sbjct: 224 KL-----------------RIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-W----NA 261
Query: 269 FFYNQYCDI-NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG----RSLGLHSE 323
F N C I T T L I + L +
Sbjct: 262 F--NLSCKILLTTRFKQVTD----------FLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 324 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK-TVIPGMDHHHEIIANNGP 382
DC LP ++ P + ++I +N
Sbjct: 310 YLDC--------------------RPQDLPREVLTT-NPRRLSIIAESIRDGLATWDN-- 346
Query: 383 ELIVKTTKNAPKGKVVTINLNN--PCE--KNWKTL--IPEDENRTLDVVAAVANNK---- 432
K ++ +LN P E K + L P + +++ + +
Sbjct: 347 ---WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSD 403
Query: 433 --LIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQ------------ITHISGRRKY-NE 477
++V+ + S+++ + + S L+L + H + + + ++
Sbjct: 404 VMVVVNKLHK-YSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 478 VF-------YGFTSFLQPGTIYHCNIPENITDQDDFKPTIF 511
Y F S + G +H E+ ++ +F
Sbjct: 463 DLIPPYLDQY-FYSHI--G--HHLKNIEH-PERMTLFRMVF 497
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 2e-07
Identities = 39/222 (17%), Positives = 69/222 (31%), Gaps = 22/222 (9%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSIS-RCMFLRHFNGIYAIPN 592
D +PM I+ P+++ G SV F +S + + + +
Sbjct: 476 DDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCD 535
Query: 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652
RG G G + R D A M+ ++Y + + G GG L
Sbjct: 536 GRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYI 595
Query: 653 LNQRPELYG----AALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY---SP 705
L + E G L D K + +SE G + +Y
Sbjct: 596 LPAKGENQGQTFTCGSALSPITD----FKLYASAFSERYLGLHGL-----DNRAYEMTKV 646
Query: 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747
H + + L++ D+++ H+ + I L
Sbjct: 647 AHRVS----ALEEQQFLIIHPTADEKIHFQHTAELITQLIRG 684
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* Length = 277 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 6e-07
Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 25/154 (16%)
Query: 622 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA 681
A+ + ++ + I + G S GG +V A N + I
Sbjct: 101 ASAHHVD-----CQRIILAGFSAGGHVV-ATYNGVATQPELRTRYHLDHYQGQHA-AIIL 153
Query: 682 YYSESEFGSPNNKTHFH-NLLS-----YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL 735
Y + + T N ++ ++ + V D+ VPP+
Sbjct: 154 GYPVIDLTAGFPTTSAARNQITTDARLWAAQRLV-----TPASKPAFVWQTATDESVPPI 208
Query: 736 HSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
+S K++ + + + + HG
Sbjct: 209 NSLKYVQAMLQH-------QVATAYHLFGSGIHG 235
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741 | Back alignment and structure |
|---|
Score = 51.3 bits (123), Expect = 9e-07
Identities = 40/203 (19%), Positives = 71/203 (34%), Gaps = 22/203 (10%)
Query: 552 NRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHF---NG-IYAIPNIRGGGELGEDWHNA 606
+R PV +Y YGG +V ++ + G + + RG G D+ A
Sbjct: 514 AKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNRGTPRRGRDFGGA 573
Query: 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666
+ D ++ + + P I + G SNGG + L + + Y +
Sbjct: 574 LYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAG 633
Query: 667 VGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY---SPLHNIKVPPNNTQYPATLV 723
D ++Y+E P N Y L +I+ + L+
Sbjct: 634 APVTD----WGLYDSHYTERYMDLPAR-----NDAGYREARVLTHIEGLRSP-----LLL 679
Query: 724 LTGDHDDRVPPLHSYKFIATLQE 746
+ G DD V +S ++ LQ+
Sbjct: 680 IHGMADDNVLFTNSTSLMSALQK 702
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} Length = 391 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 1e-06
Identities = 30/264 (11%), Positives = 63/264 (23%), Gaps = 46/264 (17%)
Query: 508 PTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV 567
V + + ++ F + ++ + I G G
Sbjct: 69 KRQPSPVCVKTEKKEGYILEKWEFYPFPKSVSTFLVLKPEHLKGAVPGVLCIPGSGRTKE 128
Query: 568 SVLPTFSISRCMFLRHFNGIYAI-------------PNIRGGGELGEDWH---------- 604
++ I + + N ++ + GE +
Sbjct: 129 GLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNAAAGEASDLECYDKGWNYDYD 188
Query: 605 -------NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGL--LVGACLNQ 655
G + D +M + Y + I I G S G +V L++
Sbjct: 189 VVSRFLLELGWSWLGYTSYLD-MQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVLDK 247
Query: 656 RPELYGAALILVGALDMLRFNKFTIAY-YSESEFGSPNNKTHFH-NLLSYSPLHNI--KV 711
A + L + + E+ PN+ H Y ++ +
Sbjct: 248 DI----YAFVYNDFLCQTQERAVVMTKPDKENRRPFPNSIRHLIPGYWRYFNFPDVVASL 303
Query: 712 PPNNTQYPATLVLTGDHDDRVPPL 735
P + G D +
Sbjct: 304 APR-----PIIFTEGGLDRDFRLV 322
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} Length = 405 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 2e-06
Identities = 36/268 (13%), Positives = 76/268 (28%), Gaps = 62/268 (23%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR 594
+G +P Y I + +I GG + + + +N + + ++
Sbjct: 143 EGELLPGYAIISEDKAQ----DTLIVVGGGDTSREDLFYMLGYSGWEHDYNVL--MVDLP 196
Query: 595 GGGE-LGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL 653
G G+ + H D +AA +++ + I I G S GG +
Sbjct: 197 GQGKNPNQGLHFE----------VDARAAISAILDWYQAPTEKIAIAGFSGGGYFTAQAV 246
Query: 654 NQRPELYGAALI-----------------LVGALDMLRFNKFTIAYYSES---------- 686
+ + L +L++ + ++
Sbjct: 247 EKDKRIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKLVTSVNKVAEVNLNKYAW 306
Query: 687 EFGSPNNKTHFHNLLSYSP---LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIAT 743
+FG + T + +L + + I VP +L L G +D S
Sbjct: 307 QFGQVDFITSVNEVLEQAQIVDYNKIDVP--------SLFLVGAGEDSELMRQSQVLYDN 358
Query: 744 LQEKIGSLPYQKNPLLLRVEQDAGHGQG 771
+++ + LR
Sbjct: 359 FKQR-------GIDVTLRKFSSESGADA 379
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A Length = 415 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 29/259 (11%), Positives = 64/259 (24%), Gaps = 49/259 (18%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN 592
+ ++ ++ + +PV+I G + F L + +
Sbjct: 176 EKGKITAHLHLTNTD---KPHPVVIVSAGLDSLQTDMWRLFR----DHLAKHDIAMLTVD 228
Query: 593 IRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGAC 652
+ G + + ++ QA + + Y + ++G GG +
Sbjct: 229 MPSVGY-------SSKYPLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRL 281
Query: 653 LNQRPELYGAALILVGALD-----------MLRFNKFTIAYYSESEFGSPNNKTHFHNLL 701
E A +IL + M + +A + +
Sbjct: 282 SFLEQEKIKACVILGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAW 341
Query: 702 SYSP-----LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 756
S KVP L ++ + D P +
Sbjct: 342 SLKVQGFLSSRKTKVP--------ILAMSLEGDPVSPYSDNQMVAFFSTYG--------- 384
Query: 757 PLLLRVEQDAGHGQGKALD 775
+ G ++LD
Sbjct: 385 KAKKISSKTITQGYEQSLD 403
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* Length = 270 | Back alignment and structure |
|---|
Score = 45.6 bits (108), Expect = 3e-05
Identities = 36/272 (13%), Positives = 69/272 (25%), Gaps = 43/272 (15%)
Query: 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISR 577
E FQ +DG ++ + I G+ + L +
Sbjct: 15 ENLYFQGMATITLERDGLQLV-GTREEPF---GEIYDMAIIFHGFTANRNTSLLREIANS 70
Query: 578 CMFLRHFNGIYAI-PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 636
I ++ + G G+ + N N +D A Y+ + +
Sbjct: 71 L----RDENIASVRFDFNGHGDSDGKFENMTV----LNEIEDANAILNYVKTDPHVRN-- 120
Query: 637 ITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM---LRFNKFTIAYYSESEFGSPNN 693
I ++G + GG++ P+L ++L A + Y+
Sbjct: 121 IYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLP 180
Query: 694 -------KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 746
+ P ++ G D V P S K+ Q
Sbjct: 181 FKDLTLGGFYLRIAQQLPIYEVSA----QFTKP-VCLIHGTDDTVVSPNASKKYDQIYQN 235
Query: 747 KIGSLPYQKNPLLLRVEQDAGHGQGKALDIEL 778
L + + A H +
Sbjct: 236 ST-----------LHLIEGADHCFSDSYQKNA 256
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} Length = 283 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 4e-05
Identities = 31/155 (20%), Positives = 49/155 (31%), Gaps = 24/155 (15%)
Query: 622 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA 681
AAE+ I+ P+ IT G S GG +V + L + ML+ N +
Sbjct: 116 AAEWHID-----PQQITPAGFSVGGHIVALYNDYWATRVATELNVTP--AMLKPNNVVLG 168
Query: 682 YYSESEFGSPNNKTHFHNLLS-----YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH 736
Y S + + ++ N+ T + T D VP +
Sbjct: 169 YPVISPLLGFPKDDATLATWTPTPNELAADQHV-----NSDNQPTFIWTTADDPIVPATN 223
Query: 737 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771
+ + L K P L V + HG
Sbjct: 224 TLAYATALATA-------KIPYELHVFKHGPHGLA 251
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A Length = 251 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 4e-05
Identities = 33/205 (16%), Positives = 59/205 (28%), Gaps = 37/205 (18%)
Query: 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG-GGELGEDWHNAGRLLKKQNC 615
V+++ Y G + ++R + + +Y P G G D G
Sbjct: 26 VLLHAYTGSPNDMNF---MARALQRSGYG-VYV-PLFSGHGTVEPLDILTKGN------- 73
Query: 616 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675
D + A + + K + + G S GG+ L P + + L
Sbjct: 74 PDIWWAESSAAVAHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHH 133
Query: 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSP----------------LHNIKVPPNNTQYP 719
Y+E +L+Y P L+ +K P
Sbjct: 134 LVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAAIDQFATTVAADLNLVKQP------- 186
Query: 720 ATLVLTGDHDDRVPPLHSYKFIATL 744
T + D+ V +Y+ L
Sbjct: 187 -TFIGQAGQDELVDGRLAYQLRDAL 210
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} Length = 270 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 7e-05
Identities = 35/210 (16%), Positives = 62/210 (29%), Gaps = 42/210 (20%)
Query: 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 616
++++G+ G S+ P ++ + + P ++G G ED F
Sbjct: 44 LLVHGFTGTPHSMRP---LAEAYAKAGYT-VCL-PRLKGHGTHYEDMERTT--------F 90
Query: 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI--LVGALDMLR 674
D+ A+ E + + I + G S GG L P++ G I V +
Sbjct: 91 HDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAA 150
Query: 675 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSP-------------------LHNIKVPPNN 715
+ + K L+Y L I P
Sbjct: 151 GMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLARLMAQTKAKLDRIVCP--- 207
Query: 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQ 745
L+ D D VPP ++ +
Sbjct: 208 -----ALIFVSDEDHVVPPGNADIIFQGIS 232
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A Length = 303 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 1e-04
Identities = 23/139 (16%), Positives = 41/139 (29%), Gaps = 14/139 (10%)
Query: 617 DDFQAAAEYMI-NKKYTKPKYITIMGGSNGGLLVGACLNQRPELYG------AALILV-G 668
F ++ + TK +T G G L+ L + + ALI + G
Sbjct: 133 TQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCG 192
Query: 669 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH 728
D+ + + N+ S SP+ V+ +H
Sbjct: 193 VYDLRELSNLESVNPKNILGLNE------RNIESVSPMLWEYTDVTVWNSTKIYVVAAEH 246
Query: 729 DDRVPPLHSYKFIATLQEK 747
D S + L++K
Sbjct: 247 DSTTFIEQSRHYADVLRKK 265
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} Length = 398 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 2e-04
Identities = 30/252 (11%), Positives = 63/252 (25%), Gaps = 54/252 (21%)
Query: 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFL 581
++ ++ F ++ N+ P I+ G GG + I+ +
Sbjct: 90 YRLEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLND 147
Query: 582 RHFNGIYAI-------------PNIRGGGE-----------------LGEDWHNAGRLLK 611
R+ + + GE + G
Sbjct: 148 RYKDPKLTQALNFVKEGYIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYL 207
Query: 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGL--LVGACLNQRPELYGAALILVGA 669
+ D +M +K+ + I + G S G +V L+ A +
Sbjct: 208 GYASYLD-MQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTLDTSI----YAFVYNDF 262
Query: 670 L-DMLRFNKFTIAYYSESEFGSPNNKTHFH----NLLSYSPLHNIKVP-PNNTQYPATLV 723
L + PN+ H ++ + P P ++
Sbjct: 263 LCQTQERAEVMTMPDKNGRRPFPNSIRHLIPDFWKNFNFPDIVAALAPRP-------IIL 315
Query: 724 LTGDHDDRVPPL 735
G D + +
Sbjct: 316 TEGGLDRDLDLV 327
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 Length = 305 | Back alignment and structure |
|---|
Score = 41.9 bits (98), Expect = 5e-04
Identities = 30/258 (11%), Positives = 67/258 (25%), Gaps = 36/258 (13%)
Query: 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF 584
+T R +G + ++ + + N ++I G+ + ++
Sbjct: 6 KTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIAS--GFARRMDHFAGLAE-YLST-- 60
Query: 585 NGIYAI-PNIRG-GGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGG 642
NG + + G + ++ K I ++
Sbjct: 61 NGFHVFRYDSLHHVGLSSGSIDEFTM----TTGKNSLCTVYHWLQTKGTQN---IGLIAA 113
Query: 643 SNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNN--------- 693
S + ++ + + V L Y S PN+
Sbjct: 114 SLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLG 173
Query: 694 -KTHFHNLL--SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 750
+ + + L + NT P + T ++DD V Y +A +
Sbjct: 174 SEVFVRDCFEHHWDTLDSTLDKVANTSVP-LIAFTANNDDWVKQEEVYDMLAHI------ 226
Query: 751 LPYQKNPLLLRVEQDAGH 768
+ L + H
Sbjct: 227 ---RTGHCKLYSLLGSSH 241
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} Length = 208 | Back alignment and structure |
|---|
Score = 40.8 bits (95), Expect = 8e-04
Identities = 27/223 (12%), Positives = 62/223 (27%), Gaps = 48/223 (21%)
Query: 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN 585
+ + G M R + +I + + +G ++ + L
Sbjct: 6 NEDFLIQGPVGQLEVMI--TRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELG 63
Query: 586 GIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNG 645
N RG G + GR +D +A ++ + ++ G +
Sbjct: 64 LKTVRFNFRGVG------KSQGRYDNGVGEVEDLKAVLRWVEHHWSQDDIWLA---GFSF 114
Query: 646 GLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 705
G + A + ++ L+ + + ++
Sbjct: 115 GAYISAKVAYDQKVAQ----LISVAPPVFYE-------------------------GFAS 145
Query: 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748
L + P L++ GD D+ VP F+ + +
Sbjct: 146 LTQMASP--------WLIVQGDQDEVVPFEQVKAFVNQISSPV 180
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 783 | |||
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 100.0 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 100.0 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 100.0 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 100.0 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 100.0 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 100.0 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 100.0 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 100.0 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 100.0 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 100.0 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 100.0 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 100.0 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 100.0 | |
| 2jbw_A | 386 | Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine | 99.89 | |
| 2o7r_A | 338 | CXE carboxylesterase; alpha/beta hydrolase; 1.40A | 99.88 | |
| 1vlq_A | 337 | Acetyl xylan esterase; TM0077, structural genomics | 99.86 | |
| 3bxp_A | 277 | Putative lipase/esterase; putative carboxylesteras | 99.86 | |
| 3ga7_A | 326 | Acetyl esterase; phosphoserine, IDP00896, hydrolas | 99.86 | |
| 3hxk_A | 276 | Sugar hydrolase; alpha-beta protein., structural g | 99.85 | |
| 3f67_A | 241 | Putative dienelactone hydrolase; alpha-beta-alpha | 99.85 | |
| 3doh_A | 380 | Esterase; alpha-beta hydrolase, beta sheet; 2.60A | 99.85 | |
| 1l7a_A | 318 | Cephalosporin C deacetylase; structural genomics, | 99.84 | |
| 3ebl_A | 365 | Gibberellin receptor GID1; alpha/beta hydrolase, l | 99.83 | |
| 3bjr_A | 283 | Putative carboxylesterase; structural genomics, jo | 99.83 | |
| 3fcy_A | 346 | Xylan esterase 1; alpha/beta hydrolase, carbohydra | 99.83 | |
| 2zsh_A | 351 | Probable gibberellin receptor GID1L1; plant hormon | 99.82 | |
| 4ao6_A | 259 | Esterase; hydrolase, thermo label; 1.60A {Unidenti | 99.82 | |
| 3qh4_A | 317 | Esterase LIPW; structural genomics, ssgcid, seattl | 99.82 | |
| 3ls2_A | 280 | S-formylglutathione hydrolase; psychrophilic organ | 99.82 | |
| 3fcx_A | 282 | FGH, esterase D, S-formylglutathione hydrolase; re | 99.81 | |
| 3fak_A | 322 | Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Unc | 99.81 | |
| 3i6y_A | 280 | Esterase APC40077; lipase, structural genomics, PS | 99.81 | |
| 1mpx_A | 615 | Alpha-amino acid ester hydrolase; alpha/beta hydro | 99.81 | |
| 4e15_A | 303 | Kynurenine formamidase; alpha/beta hydrolase fold, | 99.8 | |
| 2b9v_A | 652 | Alpha-amino acid ester hydrolase; catalytic triad, | 99.8 | |
| 3ain_A | 323 | 303AA long hypothetical esterase; carboxylesterase | 99.8 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.8 | |
| 3e4d_A | 278 | Esterase D; S-formylglutathione hydrolase, hydrola | 99.8 | |
| 2hm7_A | 310 | Carboxylesterase; alpha/beta hydrolase fold, hydro | 99.8 | |
| 2hdw_A | 367 | Hypothetical protein PA2218; alpha/beta hydrolase | 99.8 | |
| 1lzl_A | 323 | Heroin esterase; alpha/beta hydrolase; 1.30A {Rhod | 99.79 | |
| 3trd_A | 208 | Alpha/beta hydrolase; cellular processes; 1.50A {C | 99.79 | |
| 2i3d_A | 249 | AGR_C_3351P, hypothetical protein ATU1826; structu | 99.79 | |
| 2wir_A | 313 | Pesta, alpha/beta hydrolase fold-3 domain protein; | 99.79 | |
| 1zi8_A | 236 | Carboxymethylenebutenolidase; alpha and beta prote | 99.79 | |
| 2c7b_A | 311 | Carboxylesterase, ESTE1; carboxyesterase, thermoph | 99.79 | |
| 4h0c_A | 210 | Phospholipase/carboxylesterase; PSI-biology, midwe | 99.78 | |
| 1jjf_A | 268 | Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-x | 99.78 | |
| 4b6g_A | 283 | Putative esterase; hydrolase, formaldehyde detoxif | 99.78 | |
| 1jkm_A | 361 | Brefeldin A esterase; serine hydrolase, degradatio | 99.77 | |
| 3k2i_A | 422 | Acyl-coenzyme A thioesterase 4; alpha/beta hydrola | 99.77 | |
| 3k6k_A | 322 | Esterase/lipase; alpha/beta hydrolase fold; 2.20A | 99.77 | |
| 3hlk_A | 446 | Acyl-coenzyme A thioesterase 2, mitochondrial; alp | 99.77 | |
| 2o2g_A | 223 | Dienelactone hydrolase; YP_324580.1, structural ge | 99.77 | |
| 2pbl_A | 262 | Putative esterase/lipase/thioesterase; alpha/beta- | 99.77 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.76 | |
| 2uz0_A | 263 | Esterase, tributyrin esterase; alpha/beta hydrolas | 99.76 | |
| 1jji_A | 311 | Carboxylesterase; alpha-beta hydrolase fold, hydro | 99.76 | |
| 3pfb_A | 270 | Cinnamoyl esterase; alpha/beta hydrolase fold, hyd | 99.76 | |
| 3ksr_A | 290 | Putative serine hydrolase; catalytic triad, struct | 99.75 | |
| 2wtm_A | 251 | EST1E; hydrolase; 1.60A {Clostridium proteoclastic | 99.75 | |
| 2fuk_A | 220 | XC6422 protein; A/B hydrolase, structural genomics | 99.74 | |
| 1sfr_A | 304 | Antigen 85-A; alpha/beta hydrolase, structural gen | 99.74 | |
| 1r88_A | 280 | MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBP | 99.73 | |
| 3hju_A | 342 | Monoglyceride lipase; alpha/beta hydrolase, hydrol | 99.73 | |
| 3d0k_A | 304 | Putative poly(3-hydroxybutyrate) depolymerase LPQ; | 99.73 | |
| 3h04_A | 275 | Uncharacterized protein; protein with unknown func | 99.72 | |
| 3fnb_A | 405 | Acylaminoacyl peptidase SMU_737; alpha-beta-alpha | 99.72 | |
| 1jfr_A | 262 | Lipase; serine hydrolase; 1.90A {Streptomyces exfo | 99.72 | |
| 2qm0_A | 275 | BES; alpha-beta structure, structural genomics, PS | 99.72 | |
| 3og9_A | 209 | Protein YAHD A copper inducible hydrolase; alpha/b | 99.71 | |
| 1vkh_A | 273 | Putative serine hydrolase; structural genomics, jo | 99.71 | |
| 1ufo_A | 238 | Hypothetical protein TT1662; alpha-beta fold, hydr | 99.71 | |
| 3llc_A | 270 | Putative hydrolase; structural genomics, joint cen | 99.71 | |
| 3vis_A | 306 | Esterase; alpha/beta-hydrolase fold, polyethylene | 99.71 | |
| 1gkl_A | 297 | Endo-1,4-beta-xylanase Y; hydrolase, esterase fami | 99.7 | |
| 4ezi_A | 377 | Uncharacterized protein; alpha-beta hydrolases fol | 99.7 | |
| 3d7r_A | 326 | Esterase; alpha/beta fold, hydrolase; 2.01A {Staph | 99.69 | |
| 3pe6_A | 303 | Monoglyceride lipase; alpha-beta hydrolase fold, 2 | 99.69 | |
| 3mve_A | 415 | FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/ | 99.69 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.69 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.68 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.68 | |
| 1lns_A | 763 | X-prolyl dipeptidyl aminopetidase; alpha beta hydr | 99.67 | |
| 3bdi_A | 207 | Uncharacterized protein TA0194; NP_393672.1, predi | 99.67 | |
| 1fj2_A | 232 | Protein (acyl protein thioesterase 1); alpha/beta | 99.67 | |
| 1dqz_A | 280 | 85C, protein (antigen 85-C); fibronectin, structur | 99.67 | |
| 4fhz_A | 285 | Phospholipase/carboxylesterase; alpha/beta hydrola | 99.67 | |
| 3iii_A | 560 | COCE/NOND family hydrolase; structural genomics, c | 99.67 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.66 | |
| 3b5e_A | 223 | MLL8374 protein; NP_108484.1, carboxylesterase, st | 99.66 | |
| 3u0v_A | 239 | Lysophospholipase-like protein 1; alpha, beta hydr | 99.66 | |
| 4fbl_A | 281 | LIPS lipolytic enzyme; thermostable, structural ge | 99.65 | |
| 4f0j_A | 315 | Probable hydrolytic enzyme; alpha/beta hydrolase f | 99.65 | |
| 3h2g_A | 397 | Esterase; xanthomonas oryzae PV. oryzae, cell WALL | 99.65 | |
| 3nuz_A | 398 | Putative acetyl xylan esterase; structural genomic | 99.64 | |
| 1auo_A | 218 | Carboxylesterase; hydrolase; 1.80A {Pseudomonas fl | 99.64 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.64 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.64 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.64 | |
| 4fle_A | 202 | Esterase; structural genomics, PSI-biology, northe | 99.63 | |
| 3dkr_A | 251 | Esterase D; alpha beta hydrolase, mechanism, catal | 99.63 | |
| 1tht_A | 305 | Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1. | 99.63 | |
| 1k8q_A | 377 | Triacylglycerol lipase, gastric; APHA beta hydrola | 99.63 | |
| 2r8b_A | 251 | AGR_C_4453P, uncharacterized protein ATU2452; APC6 | 99.63 | |
| 3cn9_A | 226 | Carboxylesterase; alpha/beta hydrolase fold super- | 99.63 | |
| 2qru_A | 274 | Uncharacterized protein; alpha/beta-hydrolase, str | 99.62 | |
| 3g8y_A | 391 | SUSD/RAGB-associated esterase-like protein; struct | 99.62 | |
| 2gzs_A | 278 | IROE protein; enterobactin, salmochelin, DFP, hydr | 99.62 | |
| 2h1i_A | 226 | Carboxylesterase; structural genomics, PSI-2, prot | 99.62 | |
| 3rm3_A | 270 | MGLP, thermostable monoacylglycerol lipase; alpha/ | 99.61 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.61 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.6 | |
| 3i2k_A | 587 | Cocaine esterase; alpha/beta hydrolase, hydrolase; | 99.58 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.58 | |
| 2fx5_A | 258 | Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pse | 99.57 | |
| 3qit_A | 286 | CURM TE, polyketide synthase; thioesterase, alpha/ | 99.57 | |
| 2qjw_A | 176 | Uncharacterized protein XCC1541; putative hydrolas | 99.57 | |
| 2y6u_A | 398 | Peroxisomal membrane protein LPX1; hydrolase, puta | 99.56 | |
| 3ia2_A | 271 | Arylesterase; alpha-beta hydrolase fold, transitio | 99.56 | |
| 2pl5_A | 366 | Homoserine O-acetyltransferase; alpha/beta hydrola | 99.55 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.55 | |
| 4f21_A | 246 | Carboxylesterase/phospholipase family protein; str | 99.55 | |
| 1imj_A | 210 | CIB, CCG1-interacting factor B; alpha/beta hydrola | 99.55 | |
| 3c8d_A | 403 | Enterochelin esterase; alpha-beta-alpha sandwich, | 99.55 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.55 | |
| 3oos_A | 278 | Alpha/beta hydrolase family protein; APC67239.0, p | 99.54 | |
| 3r0v_A | 262 | Alpha/beta hydrolase fold protein; structural geno | 99.54 | |
| 3kxp_A | 314 | Alpha-(N-acetylaminomethylene)succinic acid hydrol | 99.53 | |
| 2qs9_A | 194 | Retinoblastoma-binding protein 9; B5T overexpresse | 99.53 | |
| 3d59_A | 383 | Platelet-activating factor acetylhydrolase; secret | 99.53 | |
| 3e0x_A | 245 | Lipase-esterase related protein; APC60309, clostri | 99.52 | |
| 1a8q_A | 274 | Bromoperoxidase A1; haloperoxidase, oxidoreductase | 99.52 | |
| 3vdx_A | 456 | Designed 16NM tetrahedral protein CAGE containing | 99.51 | |
| 3i1i_A | 377 | Homoserine O-acetyltransferase; structural genomic | 99.51 | |
| 2ocg_A | 254 | Valacyclovir hydrolase; alpha beta hydrolase fold; | 99.51 | |
| 1a8s_A | 273 | Chloroperoxidase F; haloperoxidase, oxidoreductase | 99.51 | |
| 1qlw_A | 328 | Esterase; anisotropic refinement, atomic resolutio | 99.5 | |
| 1brt_A | 277 | Bromoperoxidase A2; haloperoxidase, oxidoreductase | 99.5 | |
| 3hss_A | 293 | Putative bromoperoxidase; alpha beta hydrolase, ox | 99.5 | |
| 3guu_A | 462 | Lipase A; protein structure, hydrolase; HET: 1PE; | 99.5 | |
| 3sty_A | 267 | Methylketone synthase 1; alpha/beta hydrolase, dec | 99.49 | |
| 3fob_A | 281 | Bromoperoxidase; structural genomics, IDP00046, ba | 99.49 | |
| 3om8_A | 266 | Probable hydrolase; structural genomics, PSI-2, pr | 99.49 | |
| 1qe3_A | 489 | PNB esterase, para-nitrobenzyl esterase; alpha-bet | 99.49 | |
| 2yys_A | 286 | Proline iminopeptidase-related protein; TTHA1809, | 99.49 | |
| 1q0r_A | 298 | RDMC, aclacinomycin methylesterase; anthracycline, | 99.49 | |
| 3u1t_A | 309 | DMMA haloalkane dehalogenase; alpha/beta-hydrolase | 99.48 | |
| 1a88_A | 275 | Chloroperoxidase L; haloperoxidase, oxidoreductase | 99.48 | |
| 1uxo_A | 192 | YDEN protein; hydrolase, A/B hydrolase, esterase, | 99.48 | |
| 3fsg_A | 272 | Alpha/beta superfamily hydrolase; PF00561, MCSG, P | 99.48 | |
| 3dqz_A | 258 | Alpha-hydroxynitrIle lyase-like protein; A/B-hydrl | 99.48 | |
| 3g9x_A | 299 | Haloalkane dehalogenase; alpha/beta hydrolase, hel | 99.48 | |
| 3v48_A | 268 | Aminohydrolase, putative aminoacrylate hydrolase R | 99.47 | |
| 1zoi_A | 276 | Esterase; alpha/beta hydrolase fold; 1.60A {Pseudo | 99.47 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.46 | |
| 4dnp_A | 269 | DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petu | 99.46 | |
| 1mtz_A | 293 | Proline iminopeptidase; alpha-beta hydrolase, CAP | 99.46 | |
| 2r11_A | 306 | Carboxylesterase NP; 2632844, putative hydrolase, | 99.46 | |
| 4g9e_A | 279 | AHL-lactonase, alpha/beta hydrolase fold protein; | 99.46 | |
| 2b61_A | 377 | Homoserine O-acetyltransferase; acyl-enzyme, aspar | 99.46 | |
| 2xua_A | 266 | PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, cate | 99.45 | |
| 1wm1_A | 317 | Proline iminopeptidase; complex with inhibitor, hy | 99.44 | |
| 1tqh_A | 247 | Carboxylesterase precursor; tetrahedral intermedia | 99.44 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.44 | |
| 1hkh_A | 279 | Gamma lactamase; hydrolase, alpha/beta hydrolase, | 99.44 | |
| 2puj_A | 286 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; | 99.44 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.44 | |
| 1azw_A | 313 | Proline iminopeptidase; aminopeptidase, serine pro | 99.43 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.43 | |
| 3qvm_A | 282 | OLEI00960; structural genomics, PSI-biology, midwe | 99.43 | |
| 1c4x_A | 285 | BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-di | 99.42 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.42 | |
| 2vat_A | 444 | Acetyl-COA--deacetylcephalosporin C acetyltransfer | 99.42 | |
| 3gff_A | 331 | IROE-like serine hydrolase; NP_718593.1, structura | 99.42 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.42 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.42 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 99.42 | |
| 1iup_A | 282 | META-cleavage product hydrolase; aromatic compound | 99.42 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.42 | |
| 1u2e_A | 289 | 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase | 99.41 | |
| 2wue_A | 291 | 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolas | 99.41 | |
| 3bdv_A | 191 | Uncharacterized protein DUF1234; DUF1234 family pr | 99.4 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.4 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.4 | |
| 3p2m_A | 330 | Possible hydrolase; alpha/beta hydrolase superfami | 99.39 | |
| 3r40_A | 306 | Fluoroacetate dehalogenase; FACD, defluorinase, al | 99.39 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.38 | |
| 1j1i_A | 296 | META cleavage compound hydrolase; carbazole degrad | 99.38 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.38 | |
| 3kda_A | 301 | CFTR inhibitory factor (CIF); alpha/beta hydrolase | 99.38 | |
| 3nwo_A | 330 | PIP, proline iminopeptidase; structural genomics, | 99.38 | |
| 2qvb_A | 297 | Haloalkane dehalogenase 3; RV2579, alpha-beta hydr | 99.36 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.36 | |
| 1ycd_A | 243 | Hypothetical 27.3 kDa protein in AAP1-SMF2 interge | 99.36 | |
| 2d81_A | 318 | PHB depolymerase; alpha/beta hydrolase fold, circu | 99.35 | |
| 1mj5_A | 302 | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; | 99.35 | |
| 2xmz_A | 269 | Hydrolase, alpha/beta hydrolase fold family; menaq | 99.35 | |
| 2cjp_A | 328 | Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tu | 99.35 | |
| 2xt0_A | 297 | Haloalkane dehalogenase; hydrolase, alpha-beta hyd | 99.34 | |
| 1ukc_A | 522 | ESTA, esterase; fungi, A/B hydrolase fold, acetylc | 99.34 | |
| 2e3j_A | 356 | Epoxide hydrolase EPHB; epoxide hydrolase B, struc | 99.34 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.34 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 99.34 | |
| 2rau_A | 354 | Putative esterase; NP_343859.1, putative lipase, s | 99.33 | |
| 2wfl_A | 264 | Polyneuridine-aldehyde esterase; alkaloid metaboli | 99.33 | |
| 2qmq_A | 286 | Protein NDRG2, protein NDR2; alpha/beta-hydrolases | 99.33 | |
| 3fla_A | 267 | RIFR; alpha-beta hydrolase thioesterase, hydrolase | 99.32 | |
| 1xkl_A | 273 | SABP2, salicylic acid-binding protein 2; alpha-bet | 99.31 | |
| 1isp_A | 181 | Lipase; alpha/beta hydrolase fold, hydrolase; 1.30 | 99.31 | |
| 3bf7_A | 255 | Esterase YBFF; thioesterase, helical CAP, hydrolas | 99.31 | |
| 1b6g_A | 310 | Haloalkane dehalogenase; hydrolase, alpha/beta-hyd | 99.3 | |
| 2q0x_A | 335 | Protein DUF1749, uncharacterized protein; alpha/be | 99.3 | |
| 3c6x_A | 257 | Hydroxynitrilase; atomic resolution, hydroxynitril | 99.29 | |
| 1ehy_A | 294 | Protein (soluble epoxide hydrolase); alpha/beta hy | 99.29 | |
| 3afi_E | 316 | Haloalkane dehalogenase; A/B-hydrolase, hydrolase; | 99.28 | |
| 1wom_A | 271 | RSBQ, sigma factor SIGB regulation protein RSBQ; a | 99.28 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.27 | |
| 3bwx_A | 285 | Alpha/beta hydrolase; YP_496220.1, joint center fo | 99.27 | |
| 1m33_A | 258 | BIOH protein; alpha-betta-alpha sandwich, structur | 99.26 | |
| 1pja_A | 302 | Palmitoyl-protein thioesterase 2 precursor; hydrol | 99.26 | |
| 3ibt_A | 264 | 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, | 99.25 | |
| 3b12_A | 304 | Fluoroacetate dehalogenase; dehalogease, hydrolase | 98.9 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.2 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.19 | |
| 4fol_A | 299 | FGH, S-formylglutathione hydrolase; D-type esteras | 99.19 | |
| 3qmv_A | 280 | Thioesterase, REDJ; alpha/beta hydrolase fold, hyd | 99.18 | |
| 2psd_A | 318 | Renilla-luciferin 2-monooxygenase; alpha/beta-hydr | 99.18 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.18 | |
| 1thg_A | 544 | Lipase; hydrolase(carboxylic esterase); HET: NAG N | 99.17 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.16 | |
| 1llf_A | 534 | Lipase 3; candida cylindracea cholesterol esterase | 99.16 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 99.16 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.15 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.14 | |
| 2ogt_A | 498 | Thermostable carboxylesterase EST50; alpha/beta hy | 99.13 | |
| 1r3d_A | 264 | Conserved hypothetical protein VC1974; structural | 99.12 | |
| 3pic_A | 375 | CIP2; alpha/beta hydrolase fold, glucuronoyl ester | 99.12 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.12 | |
| 3l80_A | 292 | Putative uncharacterized protein SMU.1393C; alpha/ | 99.11 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.09 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.09 | |
| 4g4g_A | 433 | 4-O-methyl-glucuronoyl methylesterase; alpha/beta | 99.09 | |
| 4i19_A | 388 | Epoxide hydrolase; structural genomics, PSI-biolog | 99.08 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.07 | |
| 2h7c_A | 542 | Liver carboxylesterase 1; enzyme, cholesteryl este | 99.07 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.06 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.06 | |
| 3qyj_A | 291 | ALR0039 protein; alpha/beta fold, hydrolase; 1.78A | 99.04 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.03 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.02 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.02 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.01 | |
| 2wj6_A | 276 | 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxid | 99.01 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 98.99 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 98.99 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.98 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.98 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.98 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.97 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 98.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.97 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 98.97 | |
| 1ea5_A | 537 | ACHE, acetylcholinesterase; hydrolase, serine hydr | 98.96 | |
| 2ha2_A | 543 | ACHE, acetylcholinesterase; hydrolase fold, serine | 98.96 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 98.95 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 98.94 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 98.93 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.92 | |
| 3fle_A | 249 | SE_1780 protein; structural genomics, APC61035.1, | 98.92 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.91 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 98.9 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.9 | |
| 1p0i_A | 529 | Cholinesterase; serine hydrolase, butyrate, hydrol | 98.9 | |
| 2fj0_A | 551 | JuvenIle hormone esterase; manduca sexta, alpha-be | 98.89 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 98.89 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 98.86 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.85 | |
| 3c5v_A | 316 | PME-1, protein phosphatase methylesterase 1; demet | 98.85 | |
| 3ils_A | 265 | PKS, aflatoxin biosynthesis polyketide synthase; A | 98.85 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 98.85 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.84 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.84 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 98.84 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.83 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 98.83 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 98.83 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 98.83 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 98.83 | |
| 1tca_A | 317 | Lipase; hydrolase(carboxylic esterase); HET: NAG; | 98.82 | |
| 1gpl_A | 432 | RP2 lipase; serine esterase, hydrolase, lipid degr | 98.82 | |
| 3ds8_A | 254 | LIN2722 protein; unkonwn function, structural geno | 98.81 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 98.8 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.8 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 98.79 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 98.79 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.79 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 98.77 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.77 | |
| 1dx4_A | 585 | ACHE, acetylcholinesterase; hydrolase, serine este | 98.77 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 98.76 | |
| 2bce_A | 579 | Cholesterol esterase; hydrolase, serine esterase, | 98.76 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 98.76 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.75 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.74 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.74 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 98.74 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 98.73 | |
| 1kez_A | 300 | Erythronolide synthase; polyketide synthase, modul | 98.73 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 98.73 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 98.72 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 98.7 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.7 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 98.7 | |
| 3bix_A | 574 | Neuroligin-1, neuroligin I; esterase domain, alpha | 98.69 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.68 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 98.67 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.66 | |
| 3lp5_A | 250 | Putative cell surface hydrolase; structural genom | 98.66 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 98.65 | |
| 2k2q_B | 242 | Surfactin synthetase thioesterase subunit; A/B-hyd | 98.64 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 98.64 | |
| 3lcr_A | 319 | Tautomycetin biosynthetic PKS; alpha-beta hydrolas | 98.64 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 98.63 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 98.62 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 98.61 | |
| 3g02_A | 408 | Epoxide hydrolase; alpha/beta hydrolase fold, enan | 98.61 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 98.61 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 98.6 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 98.6 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 98.59 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 98.58 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 98.58 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 98.57 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 98.57 | |
| 1bu8_A | 452 | Protein (pancreatic lipase related protein 2); hyd | 98.56 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 98.56 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 98.55 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.55 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.55 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 98.55 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 98.55 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 98.54 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 98.54 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 98.53 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 98.53 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.52 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 98.51 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 98.51 | |
| 1w52_X | 452 | Pancreatic lipase related protein 2; detergent, cl | 98.49 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 98.49 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 98.47 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 98.46 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 98.46 | |
| 3icv_A | 316 | Lipase B, CALB; circular permutation, cleavage on | 98.45 | |
| 1ys1_X | 320 | Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor h | 98.45 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 98.44 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 98.43 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.43 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 98.43 | |
| 1ex9_A | 285 | Lactonizing lipase; alpha-beta hydrolase fold, pho | 98.42 | |
| 1hpl_A | 449 | Lipase; hydrolase(carboxylic esterase); 2.30A {Equ | 98.4 | |
| 3n2z_B | 446 | Lysosomal Pro-X carboxypeptidase; alpha/beta hydro | 98.4 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 98.38 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 98.38 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 98.38 | |
| 1rp1_A | 450 | Pancreatic lipase related protein 1; hydrolase, li | 98.36 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 98.35 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 98.34 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 98.33 | |
| 1ei9_A | 279 | Palmitoyl protein thioesterase 1; alpha/beta hydro | 98.32 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 98.32 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 98.32 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 98.31 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 98.3 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 98.29 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 98.29 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 98.28 | |
| 2dst_A | 131 | Hypothetical protein TTHA1544; conserved hypotheti | 98.28 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 98.27 | |
| 2x5x_A | 342 | PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE | 98.25 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 98.24 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.23 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 98.23 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 98.22 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 98.21 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.21 | |
| 2cb9_A | 244 | Fengycin synthetase; thioesterase, non-ribosomal p | 98.21 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 98.2 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.2 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.19 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 98.18 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 98.18 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 98.16 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 98.15 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 98.15 | |
| 1jmk_C | 230 | SRFTE, surfactin synthetase; thioesterase, non-rib | 98.14 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 98.13 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 98.13 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 98.12 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 98.11 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.1 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.09 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 98.06 | |
| 2zyr_A | 484 | Lipase, putative; fatty acid, hydrolase; HET: 1PE; | 98.04 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 98.03 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.0 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.99 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 97.98 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.98 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 97.98 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.98 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.97 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 97.96 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 97.96 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 97.95 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 97.94 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.94 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.93 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 97.9 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 97.9 | |
| 3tej_A | 329 | Enterobactin synthase component F; nonribosomal pe | 97.9 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 97.89 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 97.88 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.86 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.86 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 97.85 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.82 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 97.8 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 97.78 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 97.76 | |
| 2hfk_A | 319 | Pikromycin, type I polyketide synthase pikaiv; alp | 97.76 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 97.76 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 97.73 | |
| 2hih_A | 431 | Lipase 46 kDa form; A1 phospholipase, phospholipid | 97.71 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.71 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.7 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 97.7 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 97.7 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 97.69 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 97.69 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.69 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 97.67 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 97.63 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.6 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.58 | |
| 2dsn_A | 387 | Thermostable lipase; T1 lipase, hydrolase; 1.50A { | 97.55 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.55 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.54 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.5 | |
| 4ebb_A | 472 | Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2 | 97.49 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 97.47 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.46 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.45 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 97.45 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 97.45 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 97.36 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.35 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 97.34 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.32 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.32 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 97.32 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.29 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 97.28 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.26 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.26 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.24 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 97.23 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 97.17 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.16 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.15 | |
| 1whs_A | 255 | Serine carboxypeptidase II; HET: NAG FUC; 2.00A {T | 97.13 | |
| 3tjm_A | 283 | Fatty acid synthase; thioesterase domain, fatty ac | 97.12 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 97.06 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.04 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 97.02 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 97.01 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 96.99 | |
| 1ivy_A | 452 | Human protective protein; carboxypeptidase, serine | 96.96 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 96.96 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.94 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 96.91 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 96.91 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 96.84 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.82 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 96.8 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 96.73 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 96.73 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.66 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 96.63 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 96.62 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 96.53 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 96.32 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.27 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 96.19 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 96.16 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 96.11 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 96.09 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 96.09 |
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-100 Score=905.51 Aligned_cols=654 Identities=40% Similarity=0.708 Sum_probs=571.9
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCC
Q psy2521 53 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFG 132 (783)
Q Consensus 53 ~~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 132 (783)
.+.||+|+|+|+ ++++||+++.|||+||||+++|||++||++||+||+++|+++|.|++|
T Consensus 9 ~~~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~l------------------- 68 (693)
T 3iuj_A 9 RLHYPVTRQGEQ-VDHYFGQAVADPYRWLEDDRSPETEAWVKAQNAVTQDYLAQIPYRAAI------------------- 68 (693)
T ss_dssp -CCCCCCCCCCC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHTTCTTHHHH-------------------
T ss_pred CCCCCCCCCCCe-EEEeCCccccCCchhhcCCCCHHHHHHHHHHHHHHHHHHccChhHHHH-------------------
Confidence 478999999995 599999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEe
Q psy2521 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALK 212 (783)
Q Consensus 133 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~ 212 (783)
++||+++++++++++|+++|+++||++++++++|+++||+.. ++++++|||+|+++++++++++
T Consensus 69 ---------------~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~-~~~~~vllD~n~la~~~~~~l~ 132 (693)
T 3iuj_A 69 ---------------KEKLAASWNYAKEGAPFREGRYHYFFKNDGLQNQNVLWRQQE-GKPAEVFLDPNTLSPDGTTALD 132 (693)
T ss_dssp ---------------HHHHHHHSCCCEECCCEEETTEEEEEEECSSCSSCEEEEECT-TSCCEEEECGGGGSTTSCCEEE
T ss_pred ---------------HHHHHHhhccccCCCCEEECCEEEEEEEcCCCceeEEEEeCC-CCCcEEEEehhhccCCCcEEEE
Confidence 455555556699999999999999999999999999999764 6788999999999999888999
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
+++|||||++|||+.+.+|+++++|+++|++||+.+.+++.++++++++|| ||++|+|++.++.. .+..+...++.
T Consensus 133 ~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~---~~~~~~~~~~~ 208 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPD---GSELSARTDQH 208 (693)
T ss_dssp EEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC----------CCCC
T ss_pred EEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcc---cccccccCCCc
Confidence 999999999999999999999999999999999988887777766899999 99999999976431 12233457788
Q ss_pred eEEEEEcCCCCCCceeEEecCC-CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPN-GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~-~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
+||+|++++++.++++|+++++ ++.+..++.|||||++|++....+...++||++|++++ ...++.+.....
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~-------~~~~~~l~~~~~ 281 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE-------NAPLLTVQGDLD 281 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST-------TCCCEEEECSSS
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC-------CCceEEEeCCCC
Confidence 9999999999989999999876 56667889999999999998877555579999999873 223556666555
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
.....|+++|++|||++++++++++|+.++++++...+|++++++.+ .++ .+... +++|++.+.+++.++|+++++
T Consensus 282 ~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~-~~s~~-g~~lv~~~~~~g~~~l~~~d~- 357 (693)
T 3iuj_A 282 ADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ-QVL-TVHSG-SGYLFAEYMVDATARVEQFDY- 357 (693)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCE-EEEEE-TTEEEEEEEETTEEEEEEECT-
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC-CEE-EEEEE-CCEEEEEEEECCeeEEEEEEC-
Confidence 55556899999999999999999999999999877667899999874 445 55544 589999999999999999999
Q ss_pred CCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCCeEEEEE
Q psy2521 452 TGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVY 530 (783)
Q Consensus 452 ~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (783)
+|+..+.|++| .+.+.+++.+++++.+++.++|+++|+++|.+|+ +++ +.++++++.. .+++..+.+++++
T Consensus 358 ~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~-----~~g--~~~~l~~~~~-~~~~~~~~~~~~~ 429 (693)
T 3iuj_A 358 EGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP-----KSG--AISLYRASAA-PFKPEDYVSEQRF 429 (693)
T ss_dssp TSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT-----TTC--CEEEEECCCS-SCCGGGEEEEEEE
T ss_pred CCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC-----CCC--eEEEEEeCCC-CcChhhCeeEEEE
Confidence 46666888887 6778888888999999999999999999999999 567 6777877655 3788889999999
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||++||+++++|++.+.+++.|+||++|||++.+..+.|......|++ +||+|+++|+||+|++|+.|+.++...
T Consensus 430 ~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~ 508 (693)
T 3iuj_A 430 YQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLD-LGGVYAVANLRGGGEYGQAWHLAGTQQ 508 (693)
T ss_dssp EECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGG
T ss_pred EecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHH-CCCEEEEEeCCCCCccCHHHHHhhhhh
Confidence 9999999999999999987777899999999999999999999988767766 699999999999999999999999999
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCC
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 690 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~ 690 (783)
++.+.++|++++++||++++++|++||+|+|+|+||+|++++++++|++|+++|+.+|++|++++..++.+..|..+||+
T Consensus 509 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 588 (693)
T 3iuj_A 509 NKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYHTFTAGTGWAYDYGT 588 (693)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGGGSGGGGGCHHHHCC
T ss_pred cCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhccCCCchhHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998887777789899999
Q ss_pred CCCHHH-HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 691 PNNKTH-FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 691 p~~~~~-~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
|.+++. ++.+.++||+++++.. +++||+||+||.+|++|+++++.+++++|++. +.+|.++++++++++||+
T Consensus 589 p~~~~~~~~~~~~~sp~~~~~~~---~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~gH~ 661 (693)
T 3iuj_A 589 SADSEAMFDYLKGYSPLHNVRPG---VSYPSTMVTTADHDDRVVPAHSFKFAATLQAD----NAGPHPQLIRIETNAGHG 661 (693)
T ss_dssp TTSCHHHHHHHHHHCHHHHCCTT---CCCCEEEEEEESSCSSSCTHHHHHHHHHHHHH----CCSSSCEEEEEEC-----
T ss_pred ccCHHHHHHHHHhcCHHHhhccc---CCCCceeEEecCCCCCCChhHHHHHHHHHHhh----CCCCCCEEEEEeCCCCCC
Confidence 988777 8899999999999873 69999999999999999999999999999998 455689999999999999
Q ss_pred CCcc
Q psy2521 770 QGKA 773 (783)
Q Consensus 770 ~~~~ 773 (783)
+..+
T Consensus 662 ~~~~ 665 (693)
T 3iuj_A 662 AGTP 665 (693)
T ss_dssp --CH
T ss_pred Cccc
Confidence 9765
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-95 Score=867.92 Aligned_cols=676 Identities=47% Similarity=0.870 Sum_probs=586.5
Q ss_pred CCCCCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCCC
Q psy2521 54 GPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGV 133 (783)
Q Consensus 54 ~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 133 (783)
+.||+|+|+|.+++++||++|.|||+||||.++|+|++||++||++|+++|++++.|++|
T Consensus 4 ~~~p~~~~~~~~~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~~~~~l~~~~~~~~l-------------------- 63 (710)
T 2xdw_A 4 FQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLY-------------------- 63 (710)
T ss_dssp SCCCCCCCCTTCEEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHHSTHHHHH--------------------
T ss_pred CCCCCCCCCCCeeeeeCCcEEccCChhhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHH--------------------
Confidence 679999999934499999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEee
Q psy2521 134 SNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKL 213 (783)
Q Consensus 134 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~ 213 (783)
.+++++++++++++.|+++|+++||+++++++.+..||+++..++++++|+|+|++++++++.+.+
T Consensus 64 --------------~~~~~~~~~~~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~ 129 (710)
T 2xdw_A 64 --------------KERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRG 129 (710)
T ss_dssp --------------HHHHHHHHCSCEECCCEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEE
T ss_pred --------------HHHHHHhhccccCCCCEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEE
Confidence 555555666699999999999999999998888899999987678889999999999888889999
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
++|||||++|||+.+.+|+++++|+++|+++|+.+.++..+.++++++|||||++|+|++.+.......+..+...++.+
T Consensus 130 ~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 130 YAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp EEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred EEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 99999999999999999999999999999999988777776666789999999999999965432111233344567889
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC-CcEEEEEECCCCCCCcccCCCCceeeecCccc
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ-GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~-~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~ 372 (783)
||+|++++++.+++++++.++++.+..++.|||||++|++.+.++.+ .++||++|++++. ..+.....++.+......
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~l~~~~~~ 288 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES-NGITGILKWVKLIDNFEG 288 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSS-SSSCSSCCCEEEECSSSS
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccc-cccCCccceEEeeCCCCc
Confidence 99999999887788999887656667789999999999998876544 5899999997510 000001124555555444
Q ss_pred eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCC
Q psy2521 373 HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT 452 (783)
Q Consensus 373 ~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~ 452 (783)
....|++||++|+|.++.++++++|+.+|++++....|+.++++.+...+..+.+.+++++++.+..++..+|+++++.+
T Consensus 289 ~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~ 368 (710)
T 2xdw_A 289 EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT 368 (710)
T ss_dssp CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC
Confidence 45579999999999999988899999999987654468999998755577777777558999999999999999999977
Q ss_pred CceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCc--eEEEeeccCCCCCCCCCeEEEEE
Q psy2521 453 GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFK--PTIFRETIVPEFEPTLFQTKQVY 530 (783)
Q Consensus 453 G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~--~~~~~~~~~~~~~~~~~~~~~~~ 530 (783)
|+.++.|+++.+.+.+++.+++++.++|+++|+++|+++|++|+ .++ + .++++++.++.|+...+.+++++
T Consensus 369 g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~-----~tg--~~~~~~l~~~~~~~~~~~~~~~~~~~ 441 (710)
T 2xdw_A 369 GALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL-----TKE--ELEPRVFREVTVKGIDASDYQTVQIF 441 (710)
T ss_dssp CCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET-----TSS--SCCCEEEEECCCTTCCGGGEEEEEEE
T ss_pred CCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC-----CCC--ccceEEeeecccCCcCccccEEEEEE
Confidence 88778888887888888889999999999999999999999999 567 5 67888876666888889999999
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||++|+++++.|++...+++.|+||++|||++.+..+.|...+..|++++||+|+++|+||+|++|+.|+.++...
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 99999999999999999876678899999999999999989999877777762599999999999999999999999989
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCC
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 690 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~ 690 (783)
++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|++|+..+..++.+..|..+||+
T Consensus 522 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~ 601 (710)
T 2xdw_A 522 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGC 601 (710)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCC
T ss_pred cCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998877777778899999
Q ss_pred CCCHHHHHHHHhcCcccCCC-----CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 691 PNNKTHFHNLLSYSPLHNIK-----VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 691 p~~~~~~~~~~~~sp~~~v~-----~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
|..++.++.+..+||+++++ . +++||+||+||++|++|+++++.+++++|++..+..+++|.+++++++++
T Consensus 602 ~~~~~~~~~~~~~sp~~~~~~~~~~~----~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 677 (710)
T 2xdw_A 602 SDSKQHFEWLIKYSPLHNVKLPEADD----IQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTK 677 (710)
T ss_dssp TTSHHHHHHHHHHCGGGCCCCCSSTT----CCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEEEEEESS
T ss_pred CCCHHHHHHHHHhCcHhhhccccccc----CCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEEEEEeCC
Confidence 98888899999999999998 4 78877999999999999999999999999876332244578999999999
Q ss_pred CCccCCccch
Q psy2521 766 AGHGQGKALD 775 (783)
Q Consensus 766 ~gHg~~~~~~ 775 (783)
+||++..+..
T Consensus 678 ~gH~~~~~~~ 687 (710)
T 2xdw_A 678 AGHGAGKPTA 687 (710)
T ss_dssp CCSSTTCCHH
T ss_pred CCcCCCCCHH
Confidence 9999987543
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-93 Score=848.35 Aligned_cols=655 Identities=36% Similarity=0.648 Sum_probs=571.8
Q ss_pred CCCCCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCCC
Q psy2521 54 GPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGV 133 (783)
Q Consensus 54 ~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 133 (783)
+.||+|+|+|++ +++||+++.|||+||||.++|||++||++||+||+++|+++|.|++|
T Consensus 1 ~~~p~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~t~~~l~~~~~~~~l-------------------- 59 (695)
T 2bkl_A 1 MSYPATRAEQVV-DTLHGVQVADPYRWLEDEKAPEVQTWMTAQNAHAREALAKFPGREAL-------------------- 59 (695)
T ss_dssp -CCSCCCCCCCE-EEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHTSTTHHHH--------------------
T ss_pred CCCCCCCCCCee-eeeCCcEEecCChHhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHH--------------------
Confidence 358999999955 99999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEee
Q psy2521 134 SNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKL 213 (783)
Q Consensus 134 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~ 213 (783)
+++|++++++++++.|+++|+++||+++++++++..||+++..++++++|+|+|++++++.+.+.+
T Consensus 60 --------------~~~~~~~~~~~~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~ 125 (695)
T 2bkl_A 60 --------------AARFKELFYTDSVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGT 125 (695)
T ss_dssp --------------HHHHHHHHSCCEECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEE
T ss_pred --------------HHHHHHhhccccCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEE
Confidence 555555666699999999999999999999888999999987778899999999999888899999
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-cccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
++|||||++|||+.+.+|+++.+|+++|+++|+.+ ...+.++++.+++|||||+.|+|++.+... .+..++..++.
T Consensus 126 ~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~---~~~~~~~~~~~ 202 (695)
T 2bkl_A 126 WAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDP---SIKVDERPGYT 202 (695)
T ss_dssp EEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCT---TSCGGGGGGGC
T ss_pred EEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCC---CCccccCCCCC
Confidence 99999999999999999999999999999999987 555666655789999999999999965431 12234456788
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~ 372 (783)
+||+|++++++.+++++++.++++.+..++.|||||++|++.+..+...++||+++..++ .++.+......
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~---------~~~~l~~~~~~ 273 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK---------DFRLLVKGVGA 273 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS---------SCEEEEECSSC
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC---------ceEEeecCCCc
Confidence 999999999887788999887765567789999999999998876434579999977552 24455554444
Q ss_pred eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCC
Q psy2521 373 HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT 452 (783)
Q Consensus 373 ~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~ 452 (783)
....+.++|+ ||+.++.++++++|+++|++++...+|+.++++.+...+..+.+.+ ++|++.+..++..+|+++++ +
T Consensus 274 ~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~lv~~~~~dg~~~l~~~~~-~ 350 (695)
T 2bkl_A 274 KYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVG-GHLSLEYLKDATSEVRVATL-K 350 (695)
T ss_dssp CEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEET-TEEEEEEEETTEEEEEEEET-T
T ss_pred eEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEEC-CEEEEEEEECCEEEEEEEeC-C
Confidence 4444558888 9999998888999999999877655689999887566677777664 89999999999999999998 5
Q ss_pred CceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCCeEEEEEE
Q psy2521 453 GKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLFQTKQVYF 531 (783)
Q Consensus 453 G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (783)
|+..+.+.++ .+.+.+++.+++++.++|+++|+++|+++|++|+ +++ +.+++++.... |+...+.++++++
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~-----~~g--~~~~l~~~~~~-~~~~~~~~~~~~~ 422 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV-----STG--KSELWAKVDVP-MNPEQYQVEQVFY 422 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET-----TTC--CEEEEEECCCS-SCGGGEEEEEEEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC-----CCC--cEEEEecCCCC-CCHHHCeEEEEEE
Confidence 7766788887 7788788888999999999999999999999999 577 67788876554 7778889999999
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
++.||.+|+++++.|++++.+++.|+||++|||++.+..+.|......|++ +||+|+++|+||+|++|+.|+..+...+
T Consensus 423 ~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~g~~~~~~~~~~~ 501 (695)
T 2bkl_A 423 ASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLD-AGGVYAVANLRGGGEYGKAWHDAGRLDK 501 (695)
T ss_dssp ECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGG
T ss_pred ECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHh-CCCEEEEEecCCCCCcCHHHHHhhHhhc
Confidence 999999999999999987667889999999999999988889887766666 6999999999999999999999999889
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCC
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 691 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p 691 (783)
+.+.++|+++++++|++++++|++||+|+|+||||++++++++++|++|+++|+.+|++|+..+..+..+..|..+||+|
T Consensus 502 ~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~ 581 (695)
T 2bkl_A 502 KQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFGSGRTWIPEYGTA 581 (695)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCT
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccCCCcchHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887766777788899999
Q ss_pred CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 692 NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 692 ~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.+++.++.+..+||+++++.. ..+||+||+||.+|++|+++++.+++++|++. +..|.++++++++++||++.
T Consensus 582 ~~~~~~~~~~~~sp~~~~~~~---~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~gH~~~ 654 (695)
T 2bkl_A 582 EKPEDFKTLHAYSPYHHVRPD---VRYPALLMMAADHDDRVDPMHARKFVAAVQNS----PGNPATALLRIEANAGHGGA 654 (695)
T ss_dssp TSHHHHHHHHHHCGGGCCCSS---CCCCEEEEEEETTCSSSCTHHHHHHHHHHHTS----TTCCSCEEEEEETTCBTTBC
T ss_pred CCHHHHHHHHhcChHhhhhhc---CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhh----ccCCCCEEEEEeCCCCcCCC
Confidence 888889999999999999873 35678999999999999999999999999984 22378999999999999986
Q ss_pred ccc
Q psy2521 772 KAL 774 (783)
Q Consensus 772 ~~~ 774 (783)
.+.
T Consensus 655 ~~~ 657 (695)
T 2bkl_A 655 DQV 657 (695)
T ss_dssp SCH
T ss_pred CCH
Confidence 543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-91 Score=841.00 Aligned_cols=656 Identities=36% Similarity=0.650 Sum_probs=557.5
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCC--CChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCC
Q psy2521 53 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYP--HCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPH 130 (783)
Q Consensus 53 ~~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~--~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~ 130 (783)
.+.||+|+|.|++ +++||+++.|||+||||+ ++|||++|+++||++|+++|+++|.|++|
T Consensus 37 ~~~~p~~~~~~~~-~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~aen~~t~~~l~~~~~~~~l----------------- 98 (741)
T 1yr2_A 37 LPPYPASPQVPLV-EDHFGEKVSDPWRWLEADVRTDAKVAAWVQAQSAYTAAYLKQLPERAAL----------------- 98 (741)
T ss_dssp -CCCCCCCCCCCE-EEETTEEEECTTGGGGSCTTTCHHHHHHHHHHHHHHHHHHTTCTTHHHH-----------------
T ss_pred cCCCCCCCCCCee-eeeCCcEEccCcHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcCccHHHH-----------------
Confidence 4679999999955 999999999999999998 89999999999999999999999999999
Q ss_pred CCCCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCC---CCCeEEEeCCCCcCCCC
Q psy2521 131 FGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNL---TGSTEVFLDPNKLSKDG 207 (783)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~---~g~~~~llD~n~~~~~g 207 (783)
.++|++++++++.+.|+++|+++||+++++++++..||+++.. ++++++|+|+|++++++
T Consensus 99 -----------------~~~~~~~~~~~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~ 161 (741)
T 1yr2_A 99 -----------------EKRMKALIDYERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG 161 (741)
T ss_dssp -----------------HHHHHHHSCCCEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC---
T ss_pred -----------------HHHHHHhhcccccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC
Confidence 6666667777999999999999999999998889999999876 67889999999999887
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.+.+.+++|||||++|||+.+.+|+++.+|+++|+++|+.+.+++.+.++++++|||| ++|+|++.+... ..+..++
T Consensus 162 ~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~--~~~~~~~ 238 (741)
T 1yr2_A 162 ATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPK--EGQAFQA 238 (741)
T ss_dssp -EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC----------
T ss_pred CEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcc--ccccccc
Confidence 7889999999999999999999999999999999999998877666666678999999 999999965431 0112233
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-CCcEEEEEECCCCCCCcccCCCC-cee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-QGSDLHYFDLHSLPDGKISGKFP-LKT 365 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~-~~~~l~~~dl~~g~~~~l~~~~~-~~~ 365 (783)
..++.+||+|++++++.+++++++.++++.+..++.|||||++|++.+.+.. ..++||++|++++ ... ++.
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~-------~~~~~~~ 311 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG-------KIGPVTA 311 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT-------EECCCEE
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC-------CCcccEE
Confidence 4567899999999988778899988776556788999999999999887643 2489999999873 112 445
Q ss_pred eecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 366 VIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 366 l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
+..........++++|++|+|.++.++++++|+.+|++++. ..|+.++++. ...+..+.+.+ ++|++.+..++..+|
T Consensus 312 l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~-~~~l~~~~~~~-~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 312 LIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPES-KDNLESVGIAG-NRLFASYIHDAKSQV 388 (741)
T ss_dssp EECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCC-SSEEEEEEEEB-TEEEEEEEETTEEEE
T ss_pred ecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCC-CCeEEEEEEEC-CEEEEEEEECCEEEE
Confidence 55554444455779999999999998889999999998753 3588999886 44566666664 899999999999999
Q ss_pred EEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCC
Q psy2521 446 DLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF 524 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~ 524 (783)
+++++ +|+..+.|++| .+.+.+++++++++.++|+++|+++|+++|++|+ .++ +.++++++.+ .|+...+
T Consensus 389 ~~~~~-~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~-----~tg--~~~~l~~~~~-~~~~~~~ 459 (741)
T 1yr2_A 389 LAFDL-DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP-----ATA--KTTPWEPVHL-TFDPADF 459 (741)
T ss_dssp EEEET-TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET-----TTT--EEEECSCCCC-SSCGGGE
T ss_pred EEEeC-CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC-----CCC--cEEEEecCCC-CCChhHC
Confidence 99998 67766888887 7788888999999999999999999999999999 577 6777776433 5788888
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
.++++++++.||++|+++++.|++. +++.|+||++|||++.+..+.|...+..|++ +||+|+++|+||+|++|+.|+
T Consensus 460 ~~~~~~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~rG~g~~g~~~~ 536 (741)
T 1yr2_A 460 RVEQVFYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWID-SGGAFALANLRGGGEYGDAWH 536 (741)
T ss_dssp EEEEEEEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHT-TTCEEEEECCTTSSTTHHHHH
T ss_pred EEEEEEEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHH-CCcEEEEEecCCCCCCCHHHH
Confidence 9999999999999999999999975 5789999999999999988899887766655 699999999999999999999
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
..+...++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+++|+.+|++|+..+..+..+..|
T Consensus 537 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~ 616 (741)
T 1yr2_A 537 DAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW 616 (741)
T ss_dssp HTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh
Confidence 99998899999999999999999999999999999999999999999999999999999999999999998776677778
Q ss_pred hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 685 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 685 ~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
..+||+|.+++.++.+..+||+++++. +++|||+||+||.+|.+|+++++.+++++|+.. ++.|.++++++++
T Consensus 617 ~~~~g~~~~~~~~~~~~~~sp~~~~~~---~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~----~~~g~~~~l~~~~ 689 (741)
T 1yr2_A 617 VDDYGYPEKEADWRVLRRYSPYHNVRS---GVDYPAILVTTADTDDRVVPGHSFKYTAALQTA----AIGPKPHLIRIET 689 (741)
T ss_dssp HHHHCCTTSHHHHHHHHTTCGGGCCCT---TSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHS----CCCSSCEEEEEC-
T ss_pred HHHcCCCCCHHHHHHHHHcCchhhhhc---cCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhh----hcCCCCEEEEEeC
Confidence 889999988888999999999999986 268877999999999999999999999999984 3338899999999
Q ss_pred CCCccCCccch
Q psy2521 765 DAGHGQGKALD 775 (783)
Q Consensus 765 ~~gHg~~~~~~ 775 (783)
++||++..+..
T Consensus 690 ~~gH~~~~~~~ 700 (741)
T 1yr2_A 690 RAGHGSGKPID 700 (741)
T ss_dssp --------CHH
T ss_pred CCCcCCCCCHH
Confidence 99999876543
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-91 Score=833.03 Aligned_cols=657 Identities=23% Similarity=0.345 Sum_probs=545.0
Q ss_pred CCcccccccCCCCCCchhhhcccccCCCCCCCccCCceeccccC---------------ceecCCCcccCCCC--ChHHH
Q psy2521 28 PDASSSMSCESGPHPSEERAEKVEFTGPYPKVRKDETVEDDYHG---------------MKIKDPYRWLEYPH--CAETQ 90 (783)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~hg---------------~~~~Dpy~WLed~~--~~ev~ 90 (783)
|-.+++++|.+.+. .+.||+|+|+|++ ++ || +++.||||||||++ +|||+
T Consensus 16 ~~~~~~~~~~~~~~-----------~~~~p~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~d~y~wl~d~~~~~~~~~ 82 (751)
T 2xe4_A 16 PRGSHMSSDSSVAA-----------SAQPPIAAKKPHR-VT-LGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDPAVI 82 (751)
T ss_dssp -------------------------CCCCCCCCCCCCE-EE-ESCCTTSCCCSSCCSSCEEEECTTGGGCCTTSCCHHHH
T ss_pred cCcccccccccCCC-----------CCCCCCCCCCCee-ec-CCCcccccccccccCCCeEEeeCCccccCCCCCCHHHH
Confidence 44556666654311 3669999999955 88 99 99999999999999 99999
Q ss_pred HHHHHhhhhhHhHhcCC-ccHHHHHHHHHHhhhccccCCCCCCCCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCe
Q psy2521 91 IFNFMQNNISNPYCQNH-SDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENN 169 (783)
Q Consensus 91 ~~~~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~ 169 (783)
+||+|||+||+++|+++ ++|++| .+||+++++++++++|.++|++
T Consensus 83 ~~~~~~n~~~~~~~~~~~~~~~~l----------------------------------~~e~~~~~~~~~~~~p~~~g~~ 128 (751)
T 2xe4_A 83 EHLNKEKVYFQARSADIAQLRDDI----------------------------------YAEHISHINEDDMSAPYVYGKY 128 (751)
T ss_dssp HHHHHHHHHHHHHHGGGHHHHHHH----------------------------------HHHHHHTSCSSEECCCEEETTE
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHH----------------------------------HHHHHHhcccccCCCCeEECCE
Confidence 99999999999999999 999999 5555556677999999999999
Q ss_pred EEEEEEcCCCCeeEEEEEeC---CCC--CeEEEeCCCCcCCCC-cEEEeeEEEC-CCCcEEEEEEecCCCceEEEEEEEC
Q psy2521 170 YFYFHNKGLQNHSILYVQRN---LTG--STEVFLDPNKLSKDG-TTALKLYAFS-DNGKHFAYCLSKSGSDWNTLHIKDV 242 (783)
Q Consensus 170 ~yy~~~~~~~~~~~l~~~~~---~~g--~~~~llD~n~~~~~g-~~~l~~~~~S-PDG~~la~~~~~~G~d~~~i~v~Dl 242 (783)
+||+++.+++++++|||++. .++ ++++|+|+|++++++ ++.++.++|| |||++|||+.+.+|+++++||++|+
T Consensus 129 ~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl 208 (751)
T 2xe4_A 129 RYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRI 208 (751)
T ss_dssp EEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEET
T ss_pred EEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEEC
Confidence 99999999999999999975 444 679999999999884 5699999999 9999999999999999999999999
Q ss_pred CCC-ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEE
Q psy2521 243 DTG-KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 321 (783)
Q Consensus 243 ~tg-~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~ 321 (783)
++| +.+.+.+.+. +++++|||||++|+|++.+. ..++.+||+|++++++.++++++++++.. +..+
T Consensus 209 ~~g~~~l~~~~~~~-~~~~~WspDg~~l~y~~~d~-----------~~~~~~v~~~~lgt~~~~~~lv~~~~~~~-~~~~ 275 (751)
T 2xe4_A 209 SDPSQTIADKVSGT-NGEIVWGPDHTSLFYVTKDE-----------TLRENKVWRHVMGKLQSEDVCLYEEHNPL-FSAF 275 (751)
T ss_dssp TCTTCCCCCCEEEE-CSCCEECSSTTEEEEEEECT-----------TCCEEEEEEEETTSCGGGCEEEEECCCTT-CEEE
T ss_pred CCCCEeCCccccCc-eeeEEEecCCCEEEEEEECC-----------CCCCCEEEEEECCCCchhcEEEEecCCCc-eEEE
Confidence 999 8665555554 47899999999999998643 23457899999999887788999876643 6778
Q ss_pred EEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc--eeeecCccceeEEEEee---CCEEEEEECCC-CCCc
Q psy2521 322 SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL--KTVIPGMDHHHEIIANN---GPELIVKTTKN-APKG 395 (783)
Q Consensus 322 ~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~--~~l~~~~~~~~~~~s~d---g~~l~~~t~~~-~~~~ 395 (783)
+.|||||++|++..... ..++||++|++++. ..+ +.++.+.... .++++ |+.|||.++++ ++++
T Consensus 276 ~~~SpDg~~l~~~~~~~-~~~~l~~~d~~~~~-------~~~~~~~l~~~~~~~--~~s~~~~~g~~l~~~t~~~~a~~~ 345 (751)
T 2xe4_A 276 MYKAADTNTLCIGSQSP-ETAEVHLLDLRKGN-------AHNTLEIVRPREKGV--RYDVQMHGTSHLVILTNEGGAVNH 345 (751)
T ss_dssp EEECTTSSEEEEEEECS-SCEEEEEEESSSCT-------TCCCEEESSCCCTTC--CEEEEEETTTEEEEEECTTTCTTC
T ss_pred EEECCCCCEEEEEecCC-CCceEEEEECCCCC-------CCceeEEeecCCCCc--eEEEeeeeCCEEEEEeCCCCCCCc
Confidence 99999999999988653 46899999998731 113 3344332211 24444 99999999997 7899
Q ss_pred eEEEEcCCCCCCCCcEE-eecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC-------CCCceeeeecCC-CeEE
Q psy2521 396 KVVTINLNNPCEKNWKT-LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL-------NTGKRLHSFPLD-LGQI 466 (783)
Q Consensus 396 ~L~~~d~~~~~~~~~~~-li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl-------~~G~~~~~l~~~-~g~v 466 (783)
+|+.++++++ ..|+. ++++..+..+..+.+.+ ++|++.+..++..+|+++++ .+|+..+.|+++ .+.+
T Consensus 346 ~L~~~d~~~~--~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~ 422 (751)
T 2xe4_A 346 KLLIAPRGQP--SDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFT 422 (751)
T ss_dssp EEEEEETTST--TCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCE
T ss_pred EEEEEcCCCc--ccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeE
Confidence 9999998764 24788 88887665677777665 89999999999999999996 445414778776 3444
Q ss_pred Eeeec----cccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCC-CCCCCCCeEEEEEEECCCCcEEEE
Q psy2521 467 THISG----RRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVP-EFEPTLFQTKQVYFRSKDGTRVPM 541 (783)
Q Consensus 467 ~~~s~----~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~v~~ 541 (783)
.++++ +.+++.++|+++|+++|+++|.+|+ .++ +.+++++..++ .+++..+.++++++++.||++|++
T Consensus 423 ~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~-----~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~ 495 (751)
T 2xe4_A 423 VHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSP-----QDH--SRTAVKVREVGGGFDAANYKVERRFATAPDQTKIPL 495 (751)
T ss_dssp EEECGGGCCCTTCSCEEEEEEETTEEEEEEEECT-----TTC--CEEEEEECCCCTTCCGGGEEEEEEEEECTTCCEEEE
T ss_pred EEeccCcccCCCCCEEEEEEeCCCCCCEEEEEEC-----CCC--cEEEEeccccccCCCccceEEEEEEEECCCCcEEEE
Confidence 46654 4577889999999999999999999 567 67788876654 578888899999999999999999
Q ss_pred EEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh-hccccCCcChHHHHH
Q psy2521 542 YIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN-AGRLLKKQNCFDDFQ 620 (783)
Q Consensus 542 ~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~-~g~~~~~~~~~~D~~ 620 (783)
++++|++.+.+++.|+||++|||++....+.|......|++ +||+|+++|+||+|++|+.|+. .+...++.+.++|++
T Consensus 496 ~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~ 574 (751)
T 2xe4_A 496 SVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD-RGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFI 574 (751)
T ss_dssp EEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT-TTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHH
T ss_pred EEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh-CCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHH
Confidence 99999987667889999999999999888888877665554 6999999999999999999999 998888999999999
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc----cccchhhhCCCCCHHH
Q psy2521 621 AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI----AYYSESEFGSPNNKTH 696 (783)
Q Consensus 621 a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~----~~~~~~~~g~p~~~~~ 696 (783)
++++||++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..+..... ...| .+||+|.+++.
T Consensus 575 ~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~~~g~p~~~~~ 653 (751)
T 2xe4_A 575 AAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEW-EEWGNPNEYKY 653 (751)
T ss_dssp HHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHHHHT-TTTCCTTSHHH
T ss_pred HHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcccchhhH-HHcCCCCCHHH
Confidence 999999999999999999999999999999999999999999999999999987632111 1123 56899988888
Q ss_pred HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 697 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 697 ~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
++.+..+||+++++. +++||+||+||++|.+|+++++.+++++|++. ...++++.+++++++||++..+.
T Consensus 654 ~~~~~~~sp~~~~~~----~~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~----~~~~~~~~~~~~~~~gH~~~~~~ 723 (751)
T 2xe4_A 654 YDYMLSYSPMDNVRA----QEYPNIMVQCGLHDPRVAYWEPAKWVSKLREC----KTDNNEILLNIDMESGHFSAKDR 723 (751)
T ss_dssp HHHHHHHCTGGGCCS----SCCCEEEEEEETTCSSSCTHHHHHHHHHHHHH----CCSCCCEEEEEETTCCSSCCSSH
T ss_pred HHHHHhcChhhhhcc----CCCCceeEEeeCCCCCCCHHHHHHHHHHHHhc----CCCCceEEEEECCCCCCCCcCCh
Confidence 889999999999997 79989999999999999999999999999988 44457889999999999997654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-90 Score=805.49 Aligned_cols=640 Identities=22% Similarity=0.351 Sum_probs=546.6
Q ss_pred ccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCCCCCCccCCCCcHHH
Q psy2521 67 DDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFGVSNPYCQNHTDREA 146 (783)
Q Consensus 67 ~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (783)
+.-||++++|||+||||.+++|+++||++||++|.++|+++|.+++|
T Consensus 13 ~~~~~~~~~Dpy~wLEd~~~~~~~~wv~aqN~~T~~~l~~~p~~~~l--------------------------------- 59 (711)
T 4hvt_A 13 DNNKQIFNPKETKFLEEAEGVEALEWAKERTSKTEKALQAMQEYKQI--------------------------------- 59 (711)
T ss_dssp -------CHHHHGGGGSSSSSHHHHHHHHHHHHHHHHHHTSTTHHHH---------------------------------
T ss_pred cCCCceeeCCCchhhcCCCCHHHHHHHHHHHHHHHHHHhCCccHHHH---------------------------------
Confidence 55689999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCC-ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCC------CCCeEEEeCCCCcCCC-Cc-EEEeeEE-E
Q psy2521 147 IKEQLLRMANYE-KYSAPQRQENNYFYFHNKGLQNHSILYVQRNL------TGSTEVFLDPNKLSKD-GT-TALKLYA-F 216 (783)
Q Consensus 147 ~~~r~~~~~~~~-~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~------~g~~~~llD~n~~~~~-g~-~~l~~~~-~ 216 (783)
++||.++++++ +++.|.+.|+++|++++++.++| .|||+... +++|++|||+|+|+++ |+ +.+.+++ +
T Consensus 60 -~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d~~~~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~ 137 (711)
T 4hvt_A 60 -KKEIETIFYDQRKTPYGVIRKGYVYNFWMDDKNPQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNC 137 (711)
T ss_dssp -HHHHHHHHTCTTSCCCCEEETTEEEEEECCSSCSS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEEC
T ss_pred -HHHHHHHhccccccCCcEEECCEEEEEEecCCCCc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeec
Confidence 88888999887 89999999999999999999888 99998543 6789999999999987 76 9999988 9
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-cc--------ccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 217 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NV--------KFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 217 SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~--------~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
||||++++|+++.+|+|+..|+++|++||+.+.+.+. .+ +|+.++|. |+++|||.+...+ +..++
T Consensus 138 ~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~-----~~~~~ 211 (711)
T 4hvt_A 138 FQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHK-----NEITS 211 (711)
T ss_dssp SSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCST-----TCBCT
T ss_pred CCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCC-----CCcCc
Confidence 9999999999999999999999999999998877655 33 44677997 8889999864332 34556
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcE----EEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRY----LLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~----l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
.+++++||+|++||++.++++||++++.. +.+++..++|+++ +++....+...+++|+++++. + ..++
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~------~~~~ 283 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEY-IYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY-K------NLKL 283 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTS-CEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS-S------SCEE
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCc-eEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC-C------CCcc
Confidence 78899999999999999999999998764 5678889999995 555544344459999999875 1 1224
Q ss_pred eeeecCccceeEEEEeeCCEEEEEECCC-------CCCceEEEEcCCCCC-----CCCcEEeecCCCCceEEEEEEeeCC
Q psy2521 364 KTVIPGMDHHHEIIANNGPELIVKTTKN-------APKGKVVTINLNNPC-----EKNWKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 364 ~~l~~~~~~~~~~~s~dg~~l~~~t~~~-------~~~~~L~~~d~~~~~-----~~~~~~li~~~~~~~l~~~~~~~g~ 431 (783)
.++..+.+.. .+...+++||+.+..+ .++++|+.++++++. ..+|++++++..+..++.+.+.+ +
T Consensus 284 ~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 360 (711)
T 4hvt_A 284 QKINMPSDAT--LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK-D 360 (711)
T ss_dssp EECCSCTTCE--EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS-S
T ss_pred eEeecCCcce--EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC-C
Confidence 4454444333 2344577898876432 488999999998752 34699988777788898888887 7
Q ss_pred EEEEEEecCCeeEEEEEECCCCc-eeee-ecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCce
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGK-RLHS-FPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKP 508 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~-~~~~-l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~ 508 (783)
+|++.+.+++.++|+++++.+|+ ..+. +++| .+.+..++.+++++.+++.++|+++|+++|++|+ . + +.
T Consensus 361 ~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~-----~-~--~~ 432 (711)
T 4hvt_A 361 RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK-----T-H--EL 432 (711)
T ss_dssp CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT-----T-S--CE
T ss_pred EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC-----C-C--cE
Confidence 99999999999999999986675 3455 7777 5778777777888899999999999999999998 4 5 67
Q ss_pred EEEeeccCCCCCCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEE
Q psy2521 509 TIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIY 588 (783)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v 588 (783)
++++... +.+++..+.++++++++.||++|++++++|++.+.+++.|+||++|||++.+..+.|+..+.+.|.++||+|
T Consensus 433 ~~l~~~~-~~~~~~~~~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~V 511 (711)
T 4hvt_A 433 KIIRKAL-YSFDSENYVLEQKEATSFDGVKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVS 511 (711)
T ss_dssp EEEECCS-SCCCGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEE
T ss_pred EEEecCC-cccCcccCeeEEEEEECCCCeEEEEEEEecCCCCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEE
Confidence 7777653 357788889999999999999999999999988777899999999999999999999987754455579999
Q ss_pred EEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 589 AIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 589 ~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++|+||+|+||++|++.+...++.+.++|++++++||++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|
T Consensus 512 v~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~p 591 (711)
T 4hvt_A 512 VLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVP 591 (711)
T ss_dssp EEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESC
T ss_pred EEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHH-Hhh
Q psy2521 669 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL-QEK 747 (783)
Q Consensus 669 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L-~~~ 747 (783)
++||..+..++.+..|..+||+|..++.++.+.++||+++++.. ..+||+||+||++|++||++++.+++++| ++.
T Consensus 592 v~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i---~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~ 668 (711)
T 4hvt_A 592 ILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLT---QKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNP 668 (711)
T ss_dssp CCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTT---SCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCT
T ss_pred ccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhc---CCCCCEEEEecCCCCcCChHHHHHHHHHHHHHc
Confidence 99999988777777898999999988889999999999999983 45688999999999999999999999999 988
Q ss_pred hCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 748 IGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 748 ~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
|.++++++++++||++..+..+.
T Consensus 669 -------g~pv~l~~~p~~gHg~~~~~~~~ 691 (711)
T 4hvt_A 669 -------NTKTYFLESKDSGHGSGSDLKES 691 (711)
T ss_dssp -------TCCEEEEEESSCCSSSCSSHHHH
T ss_pred -------CCCEEEEEECCCCCcCcCCcchH
Confidence 89999999999999997655543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-49 Score=468.05 Aligned_cols=565 Identities=14% Similarity=0.112 Sum_probs=407.7
Q ss_pred CccCCcEEeCCeEEEEEEc-CCCCeeEEEEEeCCCCCeEEEeCCCC--cCCCCcEEEeeEEE--CCCCcE-EEEEEecCC
Q psy2521 158 EKYSAPQRQENNYFYFHNK-GLQNHSILYVQRNLTGSTEVFLDPNK--LSKDGTTALKLYAF--SDNGKH-FAYCLSKSG 231 (783)
Q Consensus 158 ~~~~~p~~~G~~~yy~~~~-~~~~~~~l~~~~~~~g~~~~llD~n~--~~~~g~~~l~~~~~--SPDG~~-la~~~~~~G 231 (783)
..+..|...|+++||.+.+ ..+....||++.. ++..+.|+.... .+....+.-..+.| ||||++ |||+.+.
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~-- 100 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRA-DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG-- 100 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECT-TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT--
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECC-CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC--
Confidence 3456677889999988774 3345688898743 455555544321 11000011113444 599999 9998654
Q ss_pred CceEEEEEEECC--C-Cccccccc-----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC
Q psy2521 232 SDWNTLHIKDVD--T-GKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ 303 (783)
Q Consensus 232 ~d~~~i~v~Dl~--t-g~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~ 303 (783)
..+||++++. + |+...++. .......++|||||+.|+|++.+..... ......+||++++.+..
T Consensus 101 --~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~------~~~~~~~i~~~~~~~~~ 172 (662)
T 3azo_A 101 --DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEG------PSDVRRFLAAVPLDGSA 172 (662)
T ss_dssp --TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSS------TTCEEEEEEEEETTSTT
T ss_pred --CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCC------CCCceeEEEEEECCCCc
Confidence 2569999998 5 76555443 2334568999999999999986531000 01234589999998721
Q ss_pred ----CCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCC----CCcEEEEEECC-CCCCCcccCCCCceeeecCc-cce
Q psy2521 304 ----DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT----QGSDLHYFDLH-SLPDGKISGKFPLKTVIPGM-DHH 373 (783)
Q Consensus 304 ----~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~----~~~~l~~~dl~-~g~~~~l~~~~~~~~l~~~~-~~~ 373 (783)
.+...+.. ....+...+.|||||++|++...... ..++||++|++ +|. ......+..+. ...
T Consensus 173 ~~~~~~~~~l~~--~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~------~~~~~~l~~~~~~~~ 244 (662)
T 3azo_A 173 AADRSAVRELSD--DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR------FADTRTLLGGPEEAI 244 (662)
T ss_dssp TTCGGGSEESSC--SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC------EEEEEEEEEETTBCE
T ss_pred cccCCceeEEEe--cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc------ccccEEeCCCCCceE
Confidence 12222320 11235567899999999999876542 23689999998 431 00133344332 222
Q ss_pred e-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCce--------EEEEEEeeCCEEEEEEecCCeeE
Q psy2521 374 H-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT--------LDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 374 ~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~--------l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
. ..|+|||+ ++|.+++++ ..+|++++++++. ++.+++.. ... +..+.+.+++.+++.... +..+
T Consensus 245 ~~~~~spdg~-l~~~~~~~~-~~~l~~~~~~~~~---~~~l~~~~-~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (662)
T 3azo_A 245 AQAEWAPDGS-LIVATDRTG-WWNLHRVDPATGA---ATQLCRRE-EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAV 317 (662)
T ss_dssp EEEEECTTSC-EEEEECTTS-SCEEEEECTTTCC---EEESSCCS-SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCE
T ss_pred cceEECCCCe-EEEEECCCC-CeEEEEEECCCCc---eeeccccc-ccccCccccccCceEeEeCCCEEEEEEEc-CccE
Confidence 2 25999999 888888754 4589999987655 56666543 221 223444444788888888 8899
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCCCCC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEPTLF 524 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~~~~ 524 (783)
|+++|+.+|+ ++.|+.+.+.+..+. +++++.+++..++...|.++|++|+ +++ +.+.+.....+.++...+
T Consensus 318 l~~~d~~~~~-~~~l~~~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~-----~~g--~~~~l~~~~~~~~~~~~~ 388 (662)
T 3azo_A 318 LGILDPESGE-LVDAAGPWTEWAATL-TVSGTRAVGVAASPRTAYEVVELDT-----VTG--RARTIGARHTDPVDPAYY 388 (662)
T ss_dssp EEEEETTTTE-EEECCSSCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEET-----TTC--CEEEEESCCCCSSCGGGS
T ss_pred EEEEECCCCc-EEEecCCCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEEC-----CCC--ceEEeecCCcccCCcccc
Confidence 9999995555 577877666665552 5677889999999999999999999 566 566666544344555555
Q ss_pred -eEEEEEEECCCCcEEEEEEEEecCcC----CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 525 -QTKQVYFRSKDGTRVPMYIIHRVGAL----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 525 -~~~~~~~~s~dg~~v~~~~~~p~~~~----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
..+.+.+++.||.+|+++++.|++.+ .+++.|+||++||+++....+.|.... ..|+++||+|+++|+||++++
T Consensus 389 ~~~~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~ 467 (662)
T 3azo_A 389 PEPQIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDV-AYFTSRGIGVADVNYGGSTGY 467 (662)
T ss_dssp CCCEEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHH-HHHHTTTCEEEEEECTTCSSS
T ss_pred CcceEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHH-HHHHhCCCEEEEECCCCCCCc
Confidence 57889999999999999999998754 457899999999999887767777655 455567999999999999999
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-c
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-F 678 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-~ 678 (783)
|++|.......++...++|+.+++++|++++++|++||+|+|+|+||++++.++.+ |++|+++|+.+|+.|+..+.. .
T Consensus 468 G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~ 546 (662)
T 3azo_A 468 GRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGG 546 (662)
T ss_dssp CHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTC
T ss_pred cHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhccc
Confidence 99999876666667789999999999999999999999999999999999999886 999999999999999876543 1
Q ss_pred cc--cccch-hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC
Q psy2521 679 TI--AYYSE-SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 755 (783)
Q Consensus 679 ~~--~~~~~-~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 755 (783)
+. ...+. ..+|.+. +..+.+..+||+.+++. +++| +||+||++|.+||+.++.+++++|+.. |
T Consensus 547 ~~~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------g 612 (662)
T 3azo_A 547 THDFESRYLDFLIGSFE--EFPERYRDRAPLTRADR----VRVP-FLLLQGLEDPVCPPEQCDRFLEAVAGC-------G 612 (662)
T ss_dssp SCGGGTTHHHHHTCCTT--TCHHHHHHTCGGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHHTTS-------C
T ss_pred ccchhhHhHHHHhCCCc--cchhHHHhhChHhHhcc----CCCC-EEEEeeCCCCCCCHHHHHHHHHHHHHc-------C
Confidence 11 11122 2345532 23455778999988876 6777 999999999999999999999999988 8
Q ss_pred CcEEEEEeCCCCccCCcc
Q psy2521 756 NPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 756 ~~~~l~~~~~~gHg~~~~ 773 (783)
.++++++++++||++...
T Consensus 613 ~~~~~~~~~~~gH~~~~~ 630 (662)
T 3azo_A 613 VPHAYLSFEGEGHGFRRK 630 (662)
T ss_dssp CCEEEEEETTCCSSCCSH
T ss_pred CCEEEEEECCCCCCCCCh
Confidence 899999999999998643
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=466.68 Aligned_cols=561 Identities=12% Similarity=0.071 Sum_probs=399.0
Q ss_pred CcEEeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEE
Q psy2521 162 APQRQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTL 237 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i 237 (783)
.++++|.+++|..+.... ....+|+.+..+++.+.|.... ..+..++|||||++|||+.+ .+|
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~-------~~~~~~~~SPdG~~la~~~~------~~i 134 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP-------NNTQWVTWSPVGHKLAYVWN------NDI 134 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-------TTEEEEEECSSTTCEEEEET------TEE
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCC-------CcceeeEECCCCCEEEEEEC------CeE
Confidence 357899998888764321 1256777776554433322211 12678999999999999864 469
Q ss_pred EEEECCCCccccccccccc-------------------cCeeEEeeCCCEEEEEEeecCCCCC-------CC--Ccc---
Q psy2521 238 HIKDVDTGKDYPEVLKNVK-------------------FPSISWTHDHKGFFYNQYCDINGTA-------DG--TET--- 286 (783)
Q Consensus 238 ~v~Dl~tg~~~~~~~~~~~-------------------~~~~~WspDg~~l~y~~~~~~~~~~-------~g--~~~--- 286 (783)
|++|+++|+..+.+..+.. ...+.|||||+.|+|.+.++..... .+ ...
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~ 214 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTV 214 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEE
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcce
Confidence 9999999987665543211 1248899999999999876541100 00 000
Q ss_pred --------cccCCceEEEEEcCC---CCCCceeEEecC----CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 287 --------TAHMGQKIYYHVLGT---EQDKDIPVVEFP----NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 287 --------~~~~~~~v~~~~lgt---~~~~d~~v~~~~----~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
..+...+|+++++.+ +......-...+ ....+...+.|||||+.+++..++......|+++|+++
T Consensus 215 ~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 215 RVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp EEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred eecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 001122688888876 421011112211 13446678999999998888877755557899999988
Q ss_pred CC----CCcccCCCCceeee-cCcc-------ceeEEEEeeCCEEE-EEECCCCCCceEEEEcCCCCCCCCcEEeecCCC
Q psy2521 352 LP----DGKISGKFPLKTVI-PGMD-------HHHEIIANNGPELI-VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE 418 (783)
Q Consensus 352 g~----~~~l~~~~~~~~l~-~~~~-------~~~~~~s~dg~~l~-~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~ 418 (783)
|. +.. ...++ .... .....|+|||+.|+ +.+++++ ...|+.++++++. .+.|+ .+.
T Consensus 295 g~~~~~~~~------~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G-~~~l~~~~~~~~~---~~~lT-~g~ 363 (740)
T 4a5s_A 295 SSGRWNCLV------ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEG-YRHICYFQIDKKD---CTFIT-KGT 363 (740)
T ss_dssp TTTEEEECG------GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTS-CEEEEEEETTCSS---CEESC-CSS
T ss_pred CccccceeE------EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCC-ceEEEEEECCCCc---eEecc-cCC
Confidence 53 111 11111 1111 11236999999988 6666654 4679999998765 34444 444
Q ss_pred CceEEEEEEeeCCEEEEEEec----CCeeEEEEEECCCCceeeeecCC----CeEEEeeeccccccEEEEEEecCCCCce
Q psy2521 419 NRTLDVVAAVANNKLIVHYIQ----NVRSVMDLHDLNTGKRLHSFPLD----LGQITHISGRRKYNEVFYGFTSFLQPGT 490 (783)
Q Consensus 419 ~~~l~~~~~~~g~~l~~~~~~----~g~~~l~~~dl~~G~~~~~l~~~----~g~v~~~s~~~d~~~l~~~~ss~~~P~~ 490 (783)
..+..... .+++.|++.... .+..+|+.+++.+++....|+.. .+.+..+++++++..+++.+++.. |+.
T Consensus 364 ~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~ 441 (740)
T 4a5s_A 364 WEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPL 441 (740)
T ss_dssp SCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCE
T ss_pred EEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCE
Confidence 55554443 446899998876 45678999999433332356632 245567788999999999999987 889
Q ss_pred EEEEeCCCCcCCCCCCceEEEeecc-C-CCCCCCCC-eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC
Q psy2521 491 IYHCNIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV 567 (783)
Q Consensus 491 vy~~d~~~~~~~tg~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~ 567 (783)
++.++. .+++ ...++.... + +.+....+ ..+.+.+ +.||.+++++++.|++++..++.|+||++|||++.
T Consensus 442 ~~l~~~-----~~~~-~~~~l~~n~~~~~~~~~~~~~~~~~~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~ 514 (740)
T 4a5s_A 442 YTLHSS-----VNDK-GLRVLEDNSALDKMLQNVQMPSKKLDFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCS 514 (740)
T ss_dssp EEEEET-----TTTE-EEEEEECCHHHHHHHTTEECCEEEEEEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTC
T ss_pred EEEEEC-----CCCc-EEEEeccChhhhhhhhhccCCccEEEEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcc
Confidence 999998 4452 233443321 0 11233334 4566666 78999999999999998778899999999999887
Q ss_pred cc-CCcCcHHHHHHHH-cCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChh
Q psy2521 568 SV-LPTFSISRCMFLR-HFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNG 645 (783)
Q Consensus 568 ~~-~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~G 645 (783)
.. ...|...+...++ ++||+|+++|+||+|++|..|........+...++|+.+++++|++++++|++||+|+|+|||
T Consensus 515 ~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~G 594 (740)
T 4a5s_A 515 QKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYG 594 (740)
T ss_dssp CCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHH
T ss_pred cccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHH
Confidence 42 3444433334444 579999999999999999999998887788888999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhh-hCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEE
Q psy2521 646 GLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVL 724 (783)
Q Consensus 646 G~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~ 724 (783)
|++++.++.++|++|+++|+.+|+.|+..+.. .|... .|.|...+..+.+...+|+.+++. ++.||+||+
T Consensus 595 G~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----i~~~P~Lii 665 (740)
T 4a5s_A 595 GYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-----VYTERYMGLPTPEDNLDHYRNSTVMSRAEN----FKQVEYLLI 665 (740)
T ss_dssp HHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH-----HHHHHHHCCSSTTTTHHHHHHSCSGGGGGG----GGGSEEEEE
T ss_pred HHHHHHHHHhCCCceeEEEEcCCccchHHhhh-----HHHHHHcCCCCccccHHHHHhCCHHHHHhc----CCCCcEEEE
Confidence 99999999999999999999999999876532 23333 366643344556788999988876 677559999
Q ss_pred ecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 725 TGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 725 ~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
||..|++|++.++.+++++|+++ ++++++.+++++||++.
T Consensus 666 ~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~~~~~H~~~ 705 (740)
T 4a5s_A 666 HGTADDNVHFQQSAQISKALVDV-------GVDFQAMWYTDEDHGIA 705 (740)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHT-------TCCCEEEEETTCCTTCC
T ss_pred EcCCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCcCC
Confidence 99999999999999999999998 88999999999999984
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=428.37 Aligned_cols=532 Identities=15% Similarity=0.129 Sum_probs=384.1
Q ss_pred HHHHHHHHHhhcCCCccC-CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcE
Q psy2521 144 REAIKEQLLRMANYEKYS-APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKH 222 (783)
Q Consensus 144 ~~~~~~r~~~~~~~~~~~-~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~ 222 (783)
+.+|...+.++....-.+ ..++||.+++|..... ....||..+ +++.+.|.... ...+..+.|||| +
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~--g~~~lw~~~--~g~~~~lt~~~------~~~~~~~~~spd--~ 76 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSE--GSVNAYLYD--GGETVKLNREP------INSVLDPHYGVG--R 76 (582)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEET--TEEEEEEEE--TTEEEECCSSC------CSEECEECTTCS--E
T ss_pred HHHHHHHHHHHhccchheeecCCCCCeEEEEEccC--CceeEEEEc--CCCcEeeeccc------ccccccccCCCC--e
Confidence 566666666553333233 2458899999987643 247788864 34444444321 124678999999 6
Q ss_pred EEEEEec-CCCceEEEEEEEC--CCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEc
Q psy2521 223 FAYCLSK-SGSDWNTLHIKDV--DTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 299 (783)
Q Consensus 223 la~~~~~-~G~d~~~i~v~Dl--~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~l 299 (783)
++|+.+. +|.+...||++++ .++.. ..+.... ....+|+|||++++|++.... .+.++++
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~-~~~~~~s~dg~~~~~~s~~~~---------------~~~l~d~ 139 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKP-MRILSGVDTGEAVVFTGATED---------------RVALYAL 139 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSCS-BEEEEEEECSSCEEEEEECSS---------------CEEEEEE
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccc-cccCCCC-ceeeeeCCCCCeEEEEecCCC---------------CceEEEc
Confidence 8888775 5666778999999 65544 3222211 136799999999999873221 2235577
Q ss_pred CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEE
Q psy2521 300 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIA 378 (783)
Q Consensus 300 gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s 378 (783)
.++. ...+...+. .++.|||||++|++...+......||++|+++|. .+.+........ ..||
T Consensus 140 ~~g~--~~~l~~~~~-----~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---------~~~l~~~~~~~~~~~~S 203 (582)
T 3o4h_A 140 DGGG--LRELARLPG-----FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---------LRVFDSGEGSFSSASIS 203 (582)
T ss_dssp ETTE--EEEEEEESS-----CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---------CEEECCSSCEEEEEEEC
T ss_pred cCCc--EEEeecCCC-----ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---------ceEeecCCCccccceEC
Confidence 6542 233444332 4688999999999887654344679999998852 233433322222 2699
Q ss_pred eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE--------EEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 379 NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV--------AAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 379 ~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~--------~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
|||+.|+ .++.++ ...|+++|++++. .+ ++......+.... +.++ +.+++....++. +.+|++
T Consensus 204 pDG~~l~-~~~~~~-~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~--~~l~~~ 274 (582)
T 3o4h_A 204 PGMKVTA-GLETAR-EARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPD-GRLAVVARREGR--SAVFID 274 (582)
T ss_dssp TTSCEEE-EEECSS-CEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTT-SCEEEEEEETTE--EEEEET
T ss_pred CCCCEEE-EccCCC-eeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCC-CcEEEEEEcCCc--EEEEEE
Confidence 9999998 444432 3579999998766 34 4444323222222 5566 488888888875 445555
Q ss_pred CCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCCCCC---CC-CeE
Q psy2521 451 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPEFEP---TL-FQT 526 (783)
Q Consensus 451 ~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~~~~---~~-~~~ 526 (783)
|+..+ .+.+.+..++.+ + ..++++.++..+|+++|.+|.. + +.+.+ .+++ .. ...
T Consensus 275 --g~~~~---~~~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~------~--~~~~l------~~~~~~~~~~~~~ 333 (582)
T 3o4h_A 275 --GERVE---APQGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSG------E--PLLEG------GLPEDLRRSIAGS 333 (582)
T ss_dssp --TEEEC---CCSSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTC------C--EEECC------CCCHHHHHTEEEE
T ss_pred --CCeec---cCCCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCC------C--ceEEE------ecCCccccccCcc
Confidence 66533 334567677777 4 4667889999999999999982 2 22222 1332 23 378
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
+++++++.||.+|+++++.|++.. .+.|+||++||+++......|.... ..|+++||+|+++|+||++++|+.|...
T Consensus 334 ~~~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~G~s~~~~ 410 (582)
T 3o4h_A 334 RLVWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFA-ASLAAAGFHVVMPNYRGSTGYGEEWRLK 410 (582)
T ss_dssp EEEEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHH-HHHHHTTCEEEEECCTTCSSSCHHHHHT
T ss_pred eEEEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHH-HHHHhCCCEEEEeccCCCCCCchhHHhh
Confidence 899999999999999999998753 3889999999998886667776655 4455579999999999999999999998
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc--c
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY--S 684 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~--~ 684 (783)
....+....++|+.+++++|++++.+| ||+|+|+|+||++++.++.++|++|+++|+.+|+.|+..+........ |
T Consensus 411 ~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 488 (582)
T 3o4h_A 411 IIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNF 488 (582)
T ss_dssp TTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHH
T ss_pred hhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHH
Confidence 888888888999999999999998887 999999999999999999999999999999999999886654322211 2
Q ss_pred hh-hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEe
Q psy2521 685 ES-EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 763 (783)
Q Consensus 685 ~~-~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~ 763 (783)
.. .+| +..+.+..++|+.+++. ++.| +|++||++|.+||+.++.+++++|+.. |.++++.++
T Consensus 489 ~~~~~~-----~~~~~~~~~sp~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~-------g~~~~~~~~ 551 (582)
T 3o4h_A 489 IEQLTG-----GSREIMRSRSPINHVDR----IKEP-LALIHPQNASRTPLKPLLRLMGELLAR-------GKTFEAHII 551 (582)
T ss_dssp HHHHTT-----TCHHHHHHTCGGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEE
T ss_pred HHHHcC-----cCHHHHHhcCHHHHHhc----CCCC-EEEEecCCCCCcCHHHHHHHHHHHHhC-------CCCEEEEEE
Confidence 22 233 23455788999988876 6766 999999999999999999999999998 889999999
Q ss_pred CCCCccCCc
Q psy2521 764 QDAGHGQGK 772 (783)
Q Consensus 764 ~~~gHg~~~ 772 (783)
+++||++..
T Consensus 552 ~~~gH~~~~ 560 (582)
T 3o4h_A 552 PDAGHAINT 560 (582)
T ss_dssp TTCCSSCCB
T ss_pred CCCCCCCCC
Confidence 999999874
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=440.82 Aligned_cols=560 Identities=12% Similarity=0.073 Sum_probs=388.7
Q ss_pred CCcEEeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNT 236 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~ 236 (783)
..++++|.+++|.....+. ....||+.+..+++. +....+.. .+..++|||||++|||+.+ .+
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~---~~~~~l~~----~~~~~~~SPDG~~la~~~~------~~ 131 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF---VRGNELPR----PIQYLCWSPVGSKLAYVYQ------NN 131 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE---CCSSCCCS----SBCCEEECSSTTCEEEEET------TE
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc---ccceecCc----ccccceECCCCCEEEEEEC------Ce
Confidence 4567899999887653311 135677776544432 11111211 1567999999999999853 37
Q ss_pred EEEEECCCCcccccccccc-------------------ccCeeEEeeCCCEEEEEEeecCCCC--------CCCCc----
Q psy2521 237 LHIKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGT--------ADGTE---- 285 (783)
Q Consensus 237 i~v~Dl~tg~~~~~~~~~~-------------------~~~~~~WspDg~~l~y~~~~~~~~~--------~~g~~---- 285 (783)
|+++|+.+|+..+.+..+. ....++|||||+.|+|.+.++.... .....
T Consensus 132 i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 132 IYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9999999988665442221 1147999999999999987642100 00000
Q ss_pred ------ccccCCceEEEEEcCCCCCC-ceeEEe---cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE----CCC
Q psy2521 286 ------TTAHMGQKIYYHVLGTEQDK-DIPVVE---FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD----LHS 351 (783)
Q Consensus 286 ------~~~~~~~~v~~~~lgt~~~~-d~~v~~---~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d----l~~ 351 (783)
-.......|+++++.++... ...+.. ......+...+.|||||+.++...++.....+|+++| +.+
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 291 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT 291 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC
Confidence 00012236778887654310 001100 0012345568999999875554444433347899999 766
Q ss_pred CCCCcccCCCCceeee----cCcc--ce-----eEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCc
Q psy2521 352 LPDGKISGKFPLKTVI----PGMD--HH-----HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENR 420 (783)
Q Consensus 352 g~~~~l~~~~~~~~l~----~~~~--~~-----~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~ 420 (783)
|.... ++ .+.. .. ...|+|||+.|++.+.......+|+.++++++. .+.+... ...
T Consensus 292 g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~---~~~lt~~-~~~ 358 (719)
T 1z68_A 292 WDCPK---------TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN---AIQITSG-KWE 358 (719)
T ss_dssp EECCG---------GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT---CEECSCS-SSC
T ss_pred CceEE---------EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc---eEecccC-ceE
Confidence 42211 11 1111 11 236999999998865544446789999997755 4555443 344
Q ss_pred eEEEEEEeeCCEEEEEEec----CCeeEEEEEECCCCc-eeeeecC----CCeEEEeeeccccccEEEEEEecCCCCceE
Q psy2521 421 TLDVVAAVANNKLIVHYIQ----NVRSVMDLHDLNTGK-RLHSFPL----DLGQITHISGRRKYNEVFYGFTSFLQPGTI 491 (783)
Q Consensus 421 ~l~~~~~~~g~~l~~~~~~----~g~~~l~~~dl~~G~-~~~~l~~----~~g~v~~~s~~~d~~~l~~~~ss~~~P~~v 491 (783)
+.....+ +++.|++.... .+..+|+.+++.+|+ ..+.++. ..+.+..++.+++++.+++.+++++.| .+
T Consensus 359 v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~ 436 (719)
T 1z68_A 359 AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-IS 436 (719)
T ss_dssp EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EE
T ss_pred EEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eE
Confidence 4444444 76888888876 566789999885553 2345542 223344566778889999999999888 68
Q ss_pred EEEeCCCCcCCCCCCceEEEeecc-C-CCCCCCCC-eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc
Q psy2521 492 YHCNIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS 568 (783)
Q Consensus 492 y~~d~~~~~~~tg~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~ 568 (783)
+.+|+ ++++ ...++.... + ..++...+ ..+.+++++.| .+++++++.|++++..++.|+||++||+++..
T Consensus 437 ~l~d~-----~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~ 509 (719)
T 1z68_A 437 TLHDG-----RTDQ-EIKILEENKELENALKNIQLPKEEIKKLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQ 509 (719)
T ss_dssp EEECS-----SSCC-EEEEEECCHHHHHHTTSBCCCEEEEEEEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBC
T ss_pred EEEEC-----CCCC-EEEEeecchhhhhhhccccCCceEEEEEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcC
Confidence 89998 4662 234444321 1 12344445 67889999888 99999999999876677899999999998875
Q ss_pred c-CCcCcHHHHH-HHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhH
Q psy2521 569 V-LPTFSISRCM-FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGG 646 (783)
Q Consensus 569 ~-~~~~~~~~~~-~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG 646 (783)
. ...|...+.. +++++||+|+++|+||+|++|..|.......++...++|+.+++++|++++.+|++||+|+|+|+||
T Consensus 510 ~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG 589 (719)
T 1z68_A 510 SVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGG 589 (719)
T ss_dssp CCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHH
T ss_pred cccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHH
Confidence 3 3345433333 4446799999999999999999998887777777789999999999999888999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchh-hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEe
Q psy2521 647 LLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSES-EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLT 725 (783)
Q Consensus 647 ~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~ 725 (783)
++++.++.++|++|+++|+.+|+.|+..+.. .|.. .+|.|...+..+.+...+|+.+++. +++||+||+|
T Consensus 590 ~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~P~li~~ 660 (719)
T 1z68_A 590 YVSSLALASGTGLFKCGIAVAPVSSWEYYAS-----VYTERFMGLPTKDDNLEHYKNSTVMARAEY----FRNVDYLLIH 660 (719)
T ss_dssp HHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-----HHHHHHHCCSSTTTTHHHHHHTCSGGGGGG----GTTSEEEEEE
T ss_pred HHHHHHHHhCCCceEEEEEcCCccChHHhcc-----ccchhhcCCcccccchhhhhhCCHhHHHhc----CCCCcEEEEE
Confidence 9999999999999999999999998865421 1222 3476643334455678889888776 6775699999
Q ss_pred cCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 726 GDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 726 g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
|++|.+|++.++.+++++|+.. +.++++++++++||++.
T Consensus 661 G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~gH~~~ 699 (719)
T 1z68_A 661 GTADDNVHFQNSAQIAKALVNA-------QVDFQAMWYSDQNHGLS 699 (719)
T ss_dssp ETTCSSSCTHHHHHHHHHHHHT-------TCCCEEEEETTCCTTCC
T ss_pred eCCCCCcCHHHHHHHHHHHHHC-------CCceEEEEECcCCCCCC
Confidence 9999999999999999999988 88999999999999984
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=429.84 Aligned_cols=547 Identities=14% Similarity=0.118 Sum_probs=386.8
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCC---CeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTG---STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTL 237 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g---~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i 237 (783)
..++++|.++++... ..||+.+..++ ..+.|... ...+..++|||||++|||+.+ .+|
T Consensus 114 ~~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~-------~~~~~~~~~SPDG~~la~~~~------~~i 174 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHG-------EGFATDAKLSPKGGFVSFIRG------RNL 174 (741)
T ss_dssp CEECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCS-------SSCEEEEEECTTSSEEEEEET------TEE
T ss_pred eEECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccC-------CcccccccCCCCCCEEEEEeC------CcE
Confidence 456688999888764 45666665444 33333221 123678999999999999864 279
Q ss_pred EEEECCCCccccccccccc-----------------cCeeEEeeCCCEEEEEEeecCCCCC--------CC---------
Q psy2521 238 HIKDVDTGKDYPEVLKNVK-----------------FPSISWTHDHKGFFYNQYCDINGTA--------DG--------- 283 (783)
Q Consensus 238 ~v~Dl~tg~~~~~~~~~~~-----------------~~~~~WspDg~~l~y~~~~~~~~~~--------~g--------- 283 (783)
+++|+++|+....+..... ...++|||||+.|+|.+.+...... .+
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 9999999876554432211 2579999999999999865421000 00
Q ss_pred CcccccCCceEEEEEcCC-CCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC-CCCcEEEEEECCCCCCCcccCCC
Q psy2521 284 TETTAHMGQKIYYHVLGT-EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN-TQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt-~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~-~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
..-.......|+++++.+ ... ..+............+.| |||++|++..... .....|+++|+.+|.
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-------- 323 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQT--QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-------- 323 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCC--EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--------
T ss_pred CCCCCCCeeEEEEEECCCCCce--EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--------
Confidence 000001123788888766 432 222221122345668999 9999999887532 234899999998852
Q ss_pred CceeeecCccc------eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE-EEeeCCEEE
Q psy2521 362 PLKTVIPGMDH------HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV-AAVANNKLI 434 (783)
Q Consensus 362 ~~~~l~~~~~~------~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~-~~~~g~~l~ 434 (783)
...+...... ....|+|||+ +++.+++++ ..+|+.+++++. .+.+.... ..+.... +..+++.|+
T Consensus 324 -~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g-~~~l~~~~~~~~----~~~l~~~~-~~v~~~~~~s~dg~~l~ 395 (741)
T 2ecf_A 324 -QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTG-FQHLYRIDSKGK----AAALTHGN-WSVDELLAVDEKAGLAY 395 (741)
T ss_dssp -EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTS-SCEEEEECSSSC----EEESCCSS-SCEEEEEEEETTTTEEE
T ss_pred -eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCC-ccEEEEEcCCCC----eeeeeecc-eEEEeEeEEeCCCCEEE
Confidence 1222222111 1226999998 666676644 457999997643 34444433 4444433 555667888
Q ss_pred EEEecCC--eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEe
Q psy2521 435 VHYIQNV--RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFR 512 (783)
Q Consensus 435 ~~~~~~g--~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~ 512 (783)
+....++ ..+|+.+++ +|+..+.|+.. +.+..+++++|++.+++.+++..+|+++|.+|. ..+ ..+.+.
T Consensus 396 ~~~~~~~~~~~~l~~~~~-~g~~~~~l~~~-~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~-----~~~--~~~~l~ 466 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPL-QGGQPQRLSKA-PGMHSASFARNASVYVDSWSNNSTPPQIELFRA-----NGE--KIATLV 466 (741)
T ss_dssp EEECSSCTTCBEEEEEET-TCCCCEECCCS-CSEEEEEECTTSSEEEEEEEETTEEEEEEEEET-----TSC--EEECSS
T ss_pred EEEeCCCCceEEEEEEEc-CCCCeeecccC-CCceEEEECCCCCEEEEEecCCCCCCeEEEEEc-----CCC--eEEEec
Confidence 8887776 556777776 46655667653 334577888999999999999999999999998 233 344443
Q ss_pred eccC---C-CCCCC--CC-eEEEEEEECCCC-cEEEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcH----HHHH
Q psy2521 513 ETIV---P-EFEPT--LF-QTKQVYFRSKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSI----SRCM 579 (783)
Q Consensus 513 ~~~~---~-~~~~~--~~-~~~~~~~~s~dg-~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~----~~~~ 579 (783)
.... . .+... .+ ..+.+.+++.|| .+|++.++.|++..+.++.|+||++||+++... ...|.. ....
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~ 546 (741)
T 2ecf_A 467 ENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQ 546 (741)
T ss_dssp CCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHH
T ss_pred cCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHH
Confidence 3211 0 12222 34 688999999999 999999999988655677899999999987753 233441 2446
Q ss_pred HHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 580 FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 580 ~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
.|+++||+|+++|+||.|++|..|.......++...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++
T Consensus 547 ~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~ 626 (741)
T 2ecf_A 547 YLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDS 626 (741)
T ss_dssp HHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTT
T ss_pred HHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCc
Confidence 66667999999999999999999888766666677799999999999999889999999999999999999999999999
Q ss_pred eeEEEEcCCcchhhhcccccccccchhh-hCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 660 YGAALILVGALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 660 f~a~i~~~~~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
|+++|+.+|+.|+..+.. .|... ++.|.. ..+.+...+|+.+++. ++.| +||+||++|.+|++.++.
T Consensus 627 ~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~~ 694 (741)
T 2ecf_A 627 YACGVAGAPVTDWGLYDS-----HYTERYMDLPAR--NDAGYREARVLTHIEG----LRSP-LLLIHGMADDNVLFTNST 694 (741)
T ss_dssp CSEEEEESCCCCGGGSBH-----HHHHHHHCCTGG--GHHHHHHHCSGGGGGG----CCSC-EEEEEETTCSSSCTHHHH
T ss_pred eEEEEEcCCCcchhhhcc-----ccchhhcCCccc--ChhhhhhcCHHHHHhh----CCCC-EEEEccCCCCCCCHHHHH
Confidence 999999999998764321 12222 255532 2344567889887776 6666 999999999999999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+++++|+.. +.++++.+++++||++...
T Consensus 695 ~~~~~l~~~-------~~~~~~~~~~~~~H~~~~~ 722 (741)
T 2ecf_A 695 SLMSALQKR-------GQPFELMTYPGAKHGLSGA 722 (741)
T ss_dssp HHHHHHHHT-------TCCCEEEEETTCCSSCCHH
T ss_pred HHHHHHHHC-------CCceEEEEECCCCCCCCCC
Confidence 999999988 8899999999999998643
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=424.16 Aligned_cols=545 Identities=13% Similarity=0.129 Sum_probs=381.0
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEEC
Q psy2521 163 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 242 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl 242 (783)
++++ +++.|... ..+++.+..+++...+..... .+..++|||||++|||+.+ .+|+++|+
T Consensus 89 ~spd-~~~~~~~~------~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~SpdG~~la~~~~------~~i~v~~~ 148 (706)
T 2z3z_A 89 DAGR-GLVVLFTQ------GGLVGFDMLARKVTYLFDTNE-------ETASLDFSPVGDRVAYVRN------HNLYIARG 148 (706)
T ss_dssp ETTT-TEEEEEET------TEEEEEETTTTEEEEEECCTT-------CCTTCEECTTSSEEEEEET------TEEEEEEC
T ss_pred ECCC-CeEEEEEC------CEEEEEECCCCceEEccCCcc-------cccCCcCCCCCCEEEEEEC------CeEEEEec
Confidence 3355 66666632 456666654555445544321 1456899999999999642 47999999
Q ss_pred CC-----Cccccccccccc---------------cCeeEEeeCCCEEEEEEeecCCCCC--------CCCc---------
Q psy2521 243 DT-----GKDYPEVLKNVK---------------FPSISWTHDHKGFFYNQYCDINGTA--------DGTE--------- 285 (783)
Q Consensus 243 ~t-----g~~~~~~~~~~~---------------~~~~~WspDg~~l~y~~~~~~~~~~--------~g~~--------- 285 (783)
.+ |+....+..... ...++|||||+.|+|.+.++..... ....
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~ 228 (706)
T 2z3z_A 149 GKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMA 228 (706)
T ss_dssp BCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBT
T ss_pred CcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCC
Confidence 98 876554432221 2689999999999999865421100 0000
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCC-CCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT-QGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~-~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
........|+++++.++.. ..+............+.|||||++|++...... ....|+++|+.+|. . ..
T Consensus 229 g~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~------~~ 298 (706)
T 2z3z_A 229 GTPSHHVTVGIYHLATGKT--VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--F------VR 298 (706)
T ss_dssp TSCCCEEEEEEEETTTTEE--EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--E------EE
T ss_pred CCCCCeeEEEEEECCCCce--EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--e------ee
Confidence 0011335788998876432 122221122234568999999999998765432 23689999998841 0 12
Q ss_pred eeecCccc------eeEEEEe--eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEE-EEEEeeCCEEEE
Q psy2521 365 TVIPGMDH------HHEIIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLD-VVAAVANNKLIV 435 (783)
Q Consensus 365 ~l~~~~~~------~~~~~s~--dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~-~~~~~~g~~l~~ 435 (783)
.+...... ....|+| ||+ +++.+++++ ..+|+.++.++.. .+.+.. ....+.. ..+..+++.|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g-~~~l~~~~~~~~~---~~~l~~-~~~~v~~~~~~spdg~~l~~ 372 (706)
T 2z3z_A 299 TLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDG-WNHLYLYDTTGRL---IRQVTK-GEWEVTNFAGFDPKGTRLYF 372 (706)
T ss_dssp EEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTS-SCEEEEEETTSCE---EEECCC-SSSCEEEEEEECTTSSEEEE
T ss_pred EEEEccCCCeECccCCceeecCCCCE-EEEEEccCC-ccEEEEEECCCCE---EEecCC-CCeEEEeeeEEcCCCCEEEE
Confidence 22211111 1125999 887 555666553 4679999865543 344433 3344433 234456567888
Q ss_pred EEecCC--eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEee
Q psy2521 436 HYIQNV--RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 513 (783)
Q Consensus 436 ~~~~~g--~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~ 513 (783)
....++ ...|+.+|+.+|+ .+.++.. +.+..++++++++.+++.+++...|++++.+|+ +++ +..++..
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~~~-~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~-----~~~--~~~~~~~ 443 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLTPE-SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI-----GKG--SHTLLEA 443 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESCCS-SSEEEEEECTTSSEEEEEEECSSCSCEEEEEES-----SSC--EEEEEEC
T ss_pred EecCCCCceEEEEEEEcCCCC-ceeccCC-CceEEEEECCCCCEEEEEecCCCCCcEEEEEEC-----CCC--eEeeccc
Confidence 877765 4689999996665 4566543 335677889999999999999999999999999 455 4344433
Q ss_pred ccCCCCCCCCC-eEEEEEEECCCC-cEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHH---HHHHHHcCCEE
Q psy2521 514 TIVPEFEPTLF-QTKQVYFRSKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSIS---RCMFLRHFNGI 587 (783)
Q Consensus 514 ~~~~~~~~~~~-~~~~~~~~s~dg-~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~---~~~~l~~~G~~ 587 (783)
. .+ +....+ ..+.+.+++.|| .+++++++.|++++..++.|+||++|||++.... ..|... +...|+++||.
T Consensus 444 ~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~ 521 (706)
T 2z3z_A 444 K-NP-DTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYA 521 (706)
T ss_dssp C--------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCE
T ss_pred c-ch-hhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcE
Confidence 2 11 322233 578889999999 9999999999987666788999999999877642 345543 45667667999
Q ss_pred EEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 588 YAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 588 v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
|+++|+||+|++|..|.......++...++|+.+++++|.+++++|++|++|+|+|+||++++.++.++|++|+++|+.+
T Consensus 522 v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 601 (706)
T 2z3z_A 522 VFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 601 (706)
T ss_dssp EEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEES
T ss_pred EEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcC
Confidence 99999999999999988877667777789999999999999888999999999999999999999999999999999999
Q ss_pred Ccchhhhcccccccccchhh-hCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHh
Q psy2521 668 GALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 746 (783)
Q Consensus 668 ~~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~ 746 (783)
|+.|+..+.. .|... .+.|... .+.+...+|...++. ++.| +|++||++|.+|++.++.+++++|+.
T Consensus 602 ~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~l~~ 669 (706)
T 2z3z_A 602 PVIDWNRYAI-----MYGERYFDAPQEN--PEGYDAANLLKRAGD----LKGR-LMLIHGAIDPVVVWQHSLLFLDACVK 669 (706)
T ss_dssp CCCCGGGSBH-----HHHHHHHCCTTTC--HHHHHHHCGGGGGGG----CCSE-EEEEEETTCSSSCTHHHHHHHHHHHH
T ss_pred CccchHHHHh-----hhhhhhcCCcccC--hhhhhhCCHhHhHHh----CCCC-EEEEeeCCCCCCCHHHHHHHHHHHHH
Confidence 9998765432 12222 3666431 233567788877766 5666 99999999999999999999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
. +.++++.+++++||++...
T Consensus 670 ~-------~~~~~~~~~~~~gH~~~~~ 689 (706)
T 2z3z_A 670 A-------RTYPDYYVYPSHEHNVMGP 689 (706)
T ss_dssp H-------TCCCEEEEETTCCSSCCTT
T ss_pred C-------CCCeEEEEeCCCCCCCCcc
Confidence 8 8899999999999998654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=429.69 Aligned_cols=560 Identities=11% Similarity=0.088 Sum_probs=381.2
Q ss_pred CCcEEeCCeEEEEEEcCCCC----eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQN----HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNT 236 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~----~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~ 236 (783)
...+++|.++++...+.... ...+|+.+..++..+.|..... ....+..++|||||++|||+.+ .+
T Consensus 66 ~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~~~~SPdG~~la~~~~------~~ 135 (723)
T 1xfd_A 66 YEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV----SNAKLQYAGWGPKGQQLIFIFE------NN 135 (723)
T ss_dssp EEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC----CSCCCSBCCBCSSTTCEEEEET------TE
T ss_pred EEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc----ccccccccEECCCCCEEEEEEC------Ce
Confidence 34668899999886543221 2567776655555444432211 1122567899999999999875 37
Q ss_pred EEEEECCCCcccccccccc-------------------ccCeeEEeeCCCEEEEEEeecCCCCC----------------
Q psy2521 237 LHIKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGTA---------------- 281 (783)
Q Consensus 237 i~v~Dl~tg~~~~~~~~~~-------------------~~~~~~WspDg~~l~y~~~~~~~~~~---------------- 281 (783)
|+++|+++|+.+..+.... ....++|||||+.|+|.+.+......
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999999998765443211 11469999999999999876421000
Q ss_pred -----CCCcccccCCceEEEEEcCCCCCCceeEEecCC----CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 282 -----DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN----GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 282 -----~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
.|. ......|+++++.+.... .....+. .......+.|||||++|++...+......|+++|+.+|
T Consensus 216 ~~~~~~G~---~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 216 YHYPKAGS---ENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EECCBTTS---CCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC
T ss_pred ccCCCCCC---CCCeeEEEEEECCCCcee--EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC
Confidence 000 011237888888765421 1122111 12345689999999998777666544578999999885
Q ss_pred CCCcccCCCCceeeecCc-cc------eeEEEEeeCCEEEEE-ECCCC---CCceEEEEc-CCCCCCCCcEEeecCCCCc
Q psy2521 353 PDGKISGKFPLKTVIPGM-DH------HHEIIANNGPELIVK-TTKNA---PKGKVVTIN-LNNPCEKNWKTLIPEDENR 420 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~-~~------~~~~~s~dg~~l~~~-t~~~~---~~~~L~~~d-~~~~~~~~~~~li~~~~~~ 420 (783)
. ...+.... .. ....|+|||++|++. +++++ ...+|+.+| ..++.....+.+. .....
T Consensus 291 ~---------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~ 360 (723)
T 1xfd_A 291 V---------CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT-SGDWD 360 (723)
T ss_dssp C---------EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC-CSSSC
T ss_pred c---------ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEee-cCCeE
Confidence 2 11222111 00 123699999999997 54443 245799999 4443300023333 32233
Q ss_pred eEEE-EEEeeCCEEEEEEecC--CeeEEEEEECCCCceeeeecC---CCeEEEeeeccccccEEEEEEecCCCCceEEEE
Q psy2521 421 TLDV-VAAVANNKLIVHYIQN--VRSVMDLHDLNTGKRLHSFPL---DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 421 ~l~~-~~~~~g~~l~~~~~~~--g~~~l~~~dl~~G~~~~~l~~---~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~ 494 (783)
+... .+..+++.|++....+ +..+|+.+++..+.....|+. +.+.+..++++++++.+++.+++++.|..++.
T Consensus 361 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~- 439 (723)
T 1xfd_A 361 VTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH- 439 (723)
T ss_dssp EEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-
T ss_pred EEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-
Confidence 4332 4566767888887776 566788887743323345553 23445567788999999999999999987654
Q ss_pred eCCCCcCCCCCCceEEEeecc-C-CCCCCCCC-eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCcc-C
Q psy2521 495 NIPENITDQDDFKPTIFRETI-V-PEFEPTLF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-L 570 (783)
Q Consensus 495 d~~~~~~~tg~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~ 570 (783)
+. .+++ +..++.... + ..+....+ ..+.+.+++.|| +++++++.|++++..++.|+||++||+++... .
T Consensus 440 ~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~ 512 (723)
T 1xfd_A 440 NT-----TDKK-KMFDLETNEHVKKAINDRQMPKVEYRDIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVA 512 (723)
T ss_dssp ET-----TTCC-EEEEEECCHHHHHHHHTSCCCBCCBCCEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCC
T ss_pred EC-----CCCC-EEEEeccChhhhhhhhhccCCCceEEEEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccC
Confidence 66 3442 344443211 0 01222233 567788899999 99999999998766788999999999987642 3
Q ss_pred CcCcH-HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHH
Q psy2521 571 PTFSI-SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 649 (783)
Q Consensus 571 ~~~~~-~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~ 649 (783)
..|.. ....+++++||+|+++|+||+|++|..|........+...++|+.+++++|++++.+|++||+|+|+|+||+++
T Consensus 513 ~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a 592 (723)
T 1xfd_A 513 EKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLS 592 (723)
T ss_dssp CCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHH
T ss_pred ccccccHHHHHhhcCCEEEEEECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHH
Confidence 33332 23456776799999999999999999988776666666789999999999999888899999999999999999
Q ss_pred HHHHhcC----CCceeEEEEcCCcchhhhcccccccccchh-hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEE
Q psy2521 650 GACLNQR----PELYGAALILVGALDMLRFNKFTIAYYSES-EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVL 724 (783)
Q Consensus 650 ~~~~~~~----p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~-~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~ 724 (783)
+.++.++ |++|+++|+.+|+.++..+.. .+.. .+|.|.... +.+...+|..+++. ++.+|+||+
T Consensus 593 ~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~P~lii 661 (723)
T 1xfd_A 593 TYILPAKGENQGQTFTCGSALSPITDFKLYAS-----AFSERYLGLHGLDN--RAYEMTKVAHRVSA----LEEQQFLII 661 (723)
T ss_dssp HHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH-----HHHHHHHCCCSSCC--SSTTTTCTHHHHTS----CCSCEEEEE
T ss_pred HHHHHhccccCCCeEEEEEEccCCcchHHhhh-----hccHhhcCCccCCh--hHHHhcChhhHHhh----cCCCCEEEE
Confidence 9999999 999999999999998765421 1222 235553211 12345566555555 563239999
Q ss_pred ecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 725 TGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 725 ~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
||++|.+||+.++.+++++|+.. +.++++.+++++||++.
T Consensus 662 ~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~H~~~ 701 (723)
T 1xfd_A 662 HPTADEKIHFQHTAELITQLIRG-------KANYSLQIYPDESHYFT 701 (723)
T ss_dssp EETTCSSSCHHHHHHHHHHHHHT-------TCCCEEEEETTCCSSCC
T ss_pred EeCCCCCcCHhHHHHHHHHHHHC-------CCCeEEEEECCCCcccc
Confidence 99999999999999999999988 88999999999999984
|
| >2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=223.31 Aligned_cols=254 Identities=16% Similarity=0.121 Sum_probs=184.7
Q ss_pred EEEEEecCCCCceEEEEeCCCCcCCCCC---CceEEEeeccCCCCCCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCC
Q psy2521 478 VFYGFTSFLQPGTIYHCNIPENITDQDD---FKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRR 554 (783)
Q Consensus 478 l~~~~ss~~~P~~vy~~d~~~~~~~tg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~ 554 (783)
+++..+++.+|.++|.+|. .+.. ...+.+.+ .++...+.++++++++ ||.+|+++++.|++. ++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~-dg~~i~~~l~~p~~~---~~ 151 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDE-----RRQKGQARKVELYQK----AAPLLSPPAERHELVV-DGIPMPVYVRIPEGP---GP 151 (386)
T ss_dssp HHHHHHHHHHHHHTTCCST-----HHHHHHHHHHHHHHH----HGGGSSSCEEEEEEEE-TTEEEEEEEECCSSS---CC
T ss_pred HHHHHHHhhceeeeeccCC-----CCCHHHHHHHHHHHH----HHhhcCCCeEEEEEEe-CCEEEEEEEEcCCCC---CC
Confidence 5666677888888887665 1110 00111111 1222346789999988 999999999999873 67
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||+.+... ..|.. ...+.++||+|+++|+||.|+. ........+..+|+.+++++|.+++.+++
T Consensus 152 ~P~vl~~hG~~~~~~-~~~~~--~~~l~~~G~~v~~~d~rG~G~s------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 222 (386)
T 2jbw_A 152 HPAVIMLGGLESTKE-ESFQM--ENLVLDRGMATATFDGPGQGEM------FEYKRIAGDYEKYTSAVVDLLTKLEAIRN 222 (386)
T ss_dssp EEEEEEECCSSCCTT-TTHHH--HHHHHHTTCEEEEECCTTSGGG------TTTCCSCSCHHHHHHHHHHHHHHCTTEEE
T ss_pred CCEEEEeCCCCccHH-HHHHH--HHHHHhCCCEEEEECCCCCCCC------CCCCCCCccHHHHHHHHHHHHHhCCCcCc
Confidence 899999888754443 22332 3444457999999999996554 11223344556789999999999988999
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc---cccchhhhCCCCCHHHH-HHHHhcCcccCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI---AYYSESEFGSPNNKTHF-HNLLSYSPLHNIK 710 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~---~~~~~~~~g~p~~~~~~-~~~~~~sp~~~v~ 710 (783)
+||+|+|+|+||++++.++.+ |++|+++|+. |+.|+........ ...+...+|.+...+.+ +.+..++|..++.
T Consensus 223 ~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 300 (386)
T 2jbw_A 223 DAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLS 300 (386)
T ss_dssp EEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGG
T ss_pred ccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhc
Confidence 999999999999999999998 8999999999 9998866542110 01112345665545555 6778899988777
Q ss_pred CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHH-HhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL-QEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 711 ~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L-~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
. +++| +|+++|++|. |++.++.+++++| +. ++++++++++||++.
T Consensus 301 ~----i~~P-~Lii~G~~D~-v~~~~~~~l~~~l~~~----------~~~~~~~~~~gH~~~ 346 (386)
T 2jbw_A 301 Q----IACP-TYILHGVHDE-VPLSFVDTVLELVPAE----------HLNLVVEKDGDHCCH 346 (386)
T ss_dssp G----CCSC-EEEEEETTSS-SCTHHHHHHHHHSCGG----------GEEEEEETTCCGGGG
T ss_pred c----cCCC-EEEEECCCCC-CCHHHHHHHHHHhcCC----------CcEEEEeCCCCcCCc
Confidence 6 6777 9999999999 9999999999988 42 468999999999863
|
| >2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A | Back alignment and structure |
|---|
Probab=99.88 E-value=6.4e-23 Score=221.28 Aligned_cols=264 Identities=12% Similarity=0.046 Sum_probs=165.9
Q ss_pred ccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEE-EeeccCC-CCCC---CCCeEEEEEEECCCCcEEEEEEEE
Q psy2521 471 GRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTI-FRETIVP-EFEP---TLFQTKQVYFRSKDGTRVPMYIIH 545 (783)
Q Consensus 471 ~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~-~~~~~~~-~~~~---~~~~~~~~~~~s~dg~~v~~~~~~ 545 (783)
.+++.+++++.++++..|...++++. +| .... +..+..+ ..++ ..+..+.+.+.+ +..+++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~g--~~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~~ 72 (338)
T 2o7r_A 3 NDHLETTGSSDPNTNLLKYLPIVLNP------DR--TITRPIQIPSTAASPDPTSSSPVLTKDLALNP--LHNTFVRLFL 72 (338)
T ss_dssp ---------------CTTTCSCEECT------TS--CEECCSCCCBCCCCCCTTSSCSEEEEEEEEET--TTTEEEEEEE
T ss_pred CCCCCCceeeccCcccccccceEECC------CC--eEEecCCCCCCCCCCCcccCCCEEEEEEEecC--CCCeEEEEEe
Confidence 34566789999999999988888876 44 2222 2222222 2232 457888999976 5668888888
Q ss_pred ecCc-CCCCCccEEEEecCCCCCccCCc---CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHH
Q psy2521 546 RVGA-LRNRRNPVIIYGYGGYGVSVLPT---FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA 621 (783)
Q Consensus 546 p~~~-~~~~~~P~ll~~hGg~~~~~~~~---~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a 621 (783)
|++. ..+++.|+||++|||........ |......+..+.|++|+.+|+||+++.. ....++|+.+
T Consensus 73 P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~~~~~~d~~~ 141 (338)
T 2o7r_A 73 PRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------LPAAYDDAME 141 (338)
T ss_dssp EGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------TTHHHHHHHH
T ss_pred CCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------CchHHHHHHH
Confidence 9864 34578999999999864443322 4433334432569999999999976532 2345789999
Q ss_pred HHHHHHHcC------CCCCCcEEEEEeChhHHHHHHHHhcCCC--------ceeEEEEcCCcchhhhcccccccccchhh
Q psy2521 622 AAEYMINKK------YTKPKYITIMGGSNGGLLVGACLNQRPE--------LYGAALILVGALDMLRFNKFTIAYYSESE 687 (783)
Q Consensus 622 ~~~~l~~~~------~~d~~ri~i~G~S~GG~l~~~~~~~~p~--------lf~a~i~~~~~~d~~~~~~~~~~~~~~~~ 687 (783)
+++||.++. .+|++|++|+|+|+||++++.++.++|+ .++++|+.+|++++...... ....
T Consensus 142 ~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~-----~~~~ 216 (338)
T 2o7r_A 142 ALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGS-----ELRL 216 (338)
T ss_dssp HHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHH-----HHHT
T ss_pred HHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChh-----hhcc
Confidence 999998762 2677899999999999999999999888 89999999998876432110 0000
Q ss_pred hCCCC-CHHHHHH-HH------------hcCcccC------CCCCCCCCcCC-cEEEEecCCCCCCCcHHHHHHHHHHHh
Q psy2521 688 FGSPN-NKTHFHN-LL------------SYSPLHN------IKVPPNNTQYP-ATLVLTGDHDDRVPPLHSYKFIATLQE 746 (783)
Q Consensus 688 ~g~p~-~~~~~~~-~~------------~~sp~~~------v~~~~~~~~~P-~~Li~~g~~D~~V~~~~~~~~~~~L~~ 746 (783)
...+. .....+. +. ..+|+.. +... .++| |+||++|++|..|+ ++.+++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~ 291 (338)
T 2o7r_A 217 ANDSRLPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKI---RSLGWRVMVVGCHGDPMID--RQMELAERLEK 291 (338)
T ss_dssp TTCSSSCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHH---HHHTCEEEEEEETTSTTHH--HHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhh---cCCCCCEEEEECCCCcchH--HHHHHHHHHHH
Confidence 00000 0000000 00 0112111 1110 1244 59999999999886 56889999998
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
. +.++++.+++++||++..
T Consensus 292 ~-------~~~~~~~~~~g~gH~~~~ 310 (338)
T 2o7r_A 292 K-------GVDVVAQFDVGGYHAVKL 310 (338)
T ss_dssp T-------TCEEEEEEESSCCTTGGG
T ss_pred C-------CCcEEEEEECCCceEEec
Confidence 8 889999999999999853
|
| >1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-21 Score=208.11 Aligned_cols=229 Identities=19% Similarity=0.188 Sum_probs=164.1
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
...+.++++++++.||.+|+++++.|++. .++.|+||++||+.+.... ......++ ++||+|+++|+||.|+.+
T Consensus 63 ~~~~~~~~~~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~~---~~~~~~l~-~~G~~v~~~d~rG~g~s~ 136 (337)
T 1vlq_A 63 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGF---PHDWLFWP-SMGYICFVMDTRGQGSGW 136 (337)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCC---GGGGCHHH-HTTCEEEEECCTTCCCSS
T ss_pred CCCeEEEEEEEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCCC---chhhcchh-hCCCEEEEecCCCCCCcc
Confidence 34568999999999999999999999863 4678999999998665432 22222344 469999999999987543
Q ss_pred hh-----------------HHhhccccCC----cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 601 ED-----------------WHNAGRLLKK----QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 601 ~~-----------------~~~~g~~~~~----~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
.. |...+..... ...++|+.+++++|.++..+|++||+|+|+|+||++++.++.++|+
T Consensus 137 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~- 215 (337)
T 1vlq_A 137 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKK- 215 (337)
T ss_dssp SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCSS-
T ss_pred cCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCCC-
Confidence 21 0001110000 1468999999999999988899999999999999999999999995
Q ss_pred eeEEEEcCCcchh-hhcccccccccch--hhh--CCCC-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCC
Q psy2521 660 YGAALILVGALDM-LRFNKFTIAYYSE--SEF--GSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 733 (783)
Q Consensus 660 f~a~i~~~~~~d~-~~~~~~~~~~~~~--~~~--g~p~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~ 733 (783)
++++|+.+|+++. ...........|. .+| +.+. ..+.+..+..++|...++. ++.| +|+++|.+|.+||
T Consensus 216 v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~~p 290 (337)
T 1vlq_A 216 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR----AKIP-ALFSVGLMDNICP 290 (337)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTT----CCSC-EEEEEETTCSSSC
T ss_pred ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHH----cCCC-EEEEeeCCCCCCC
Confidence 7888888886543 2221111111111 111 2333 2344555667778766665 5656 9999999999999
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+.++.+++++|+. ++++.+++++||++.
T Consensus 291 ~~~~~~~~~~l~~----------~~~~~~~~~~gH~~~ 318 (337)
T 1vlq_A 291 PSTVFAAYNYYAG----------PKEIRIYPYNNHEGG 318 (337)
T ss_dssp HHHHHHHHHHCCS----------SEEEEEETTCCTTTT
T ss_pred chhHHHHHHhcCC----------CcEEEEcCCCCCCCc
Confidence 9999988887642 478999999999964
|
| >3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=196.37 Aligned_cols=215 Identities=12% Similarity=0.056 Sum_probs=151.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEecC---cCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVG---ALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~---~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
..+++.+ ..+|..+++.++.|++ +...++.|+||++|||................|+++||.|+++|+||+|+.+.
T Consensus 3 ~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~ 81 (277)
T 3bxp_A 3 QVEQRTL-NTAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQS 81 (277)
T ss_dssp EEEEEEE-CSTTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTCC
T ss_pred ceEEEEe-ccCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCCc
Confidence 4566777 4578889999999973 22356889999999974333222222234455666799999999999663332
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcC--------------CCceeEEE
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--------------PELYGAAL 664 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~--------------p~lf~a~i 664 (783)
.......|+.+++++|.+.. .++++||+|+|+|+||++++.++.++ |..++++|
T Consensus 82 ---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v 152 (277)
T 3bxp_A 82 ---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAII 152 (277)
T ss_dssp ---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEE
T ss_pred ---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEE
Confidence 12245789999999998752 26788999999999999999999875 77899999
Q ss_pred EcCCcchhhhcccccccccch-hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHH
Q psy2521 665 ILVGALDMLRFNKFTIAYYSE-SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIAT 743 (783)
Q Consensus 665 ~~~~~~d~~~~~~~~~~~~~~-~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~ 743 (783)
+.+|+.++..... ....+. ..++ .+...+|...+.. ...| +|++||++|..||+.++.+++++
T Consensus 153 ~~~p~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~~ 216 (277)
T 3bxp_A 153 LGYPVIDLTAGFP--TTSAARNQITT---------DARLWAAQRLVTP----ASKP-AFVWQTATDESVPPINSLKYVQA 216 (277)
T ss_dssp EESCCCBTTSSSS--SSHHHHHHHCS---------CGGGSBGGGGCCT----TSCC-EEEEECTTCCCSCTHHHHHHHHH
T ss_pred EeCCcccCCCCCC--Cccccchhccc---------hhhhcCHhhcccc----CCCC-EEEEeeCCCCccChHHHHHHHHH
Confidence 9999987543211 000110 0011 1234667666654 3445 99999999999999999999999
Q ss_pred HHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 744 LQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 744 L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
|++. +.++++.+++++||++..
T Consensus 217 l~~~-------~~~~~~~~~~~~~H~~~~ 238 (277)
T 3bxp_A 217 MLQH-------QVATAYHLFGSGIHGLAL 238 (277)
T ss_dssp HHHT-------TCCEEEEECCCC------
T ss_pred HHHC-------CCeEEEEEeCCCCccccc
Confidence 9988 889999999999998754
|
| >3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=200.63 Aligned_cols=218 Identities=14% Similarity=0.060 Sum_probs=154.3
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc-CCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G 600 (783)
..+..+.+++++.|| .|++.++.|++. +.|+||++|||................|++ .||+|+.+|||+++++.
T Consensus 59 ~~~~~~~~~~~~~~g-~i~~~~~~p~~~----~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 59 PSMTTRTCAVPTPYG-DVTTRLYSPQPT----SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp CCCEEEEEEECCTTS-CEEEEEEESSSS----CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred CCcceEEEEeecCCC-CeEEEEEeCCCC----CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 345679999999999 899999999762 349999999987333222223334455654 69999999999976643
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCCc------eeEEEEcCCcch
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL------YGAALILVGALD 671 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~l------f~a~i~~~~~~d 671 (783)
....++|+.++++||++.. .+|++||+|+|+|+||++++.++.++|+. ++++++.+|+.+
T Consensus 134 -----------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 134 -----------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred -----------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 1234689999999998863 47999999999999999999999887764 899999999887
Q ss_pred hhhcccccccccchhhhCCC---CCHHHHHH-HH--------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHH
Q psy2521 672 MLRFNKFTIAYYSESEFGSP---NNKTHFHN-LL--------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYK 739 (783)
Q Consensus 672 ~~~~~~~~~~~~~~~~~g~p---~~~~~~~~-~~--------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~ 739 (783)
+..... ...++.. ...+.... +. ..+|+............||+||+||+.|..| .++.+
T Consensus 203 ~~~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~ 273 (326)
T 3ga7_A 203 LQDSVS-------RRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRL 273 (326)
T ss_dssp CSCCHH-------HHHCCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHH
T ss_pred cCCChh-------HhhhcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHH
Confidence 643210 0111110 11111111 11 1233322100000014566999999999998 58899
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 740 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 740 ~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++++|++. |.++++++|++++|+|.
T Consensus 274 ~~~~l~~~-------g~~~~~~~~~g~~H~f~ 298 (326)
T 3ga7_A 274 LHQTLQAH-------QQPCEYKMYPGTLHAFL 298 (326)
T ss_dssp HHHHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred HHHHHHHC-------CCcEEEEEeCCCccchh
Confidence 99999998 89999999999999995
|
| >3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.1e-21 Score=198.10 Aligned_cols=215 Identities=16% Similarity=0.136 Sum_probs=155.3
Q ss_pred EEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc
Q psy2521 529 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 608 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~ 608 (783)
..+.+.+|.++.+++..|.....+++.|+||++|||................|+++||.|+++|+||.|+-. .+
T Consensus 17 ~~~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~-~~----- 90 (276)
T 3hxk_A 17 STFSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGT-NY----- 90 (276)
T ss_dssp EECCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCC-CS-----
T ss_pred ccccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcC-CC-----
Confidence 456677899888877655433234788999999997533333333334556666679999999999965422 10
Q ss_pred ccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhc-CCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~-~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
......+.|+.+++++|.+.. .+|+++|+|+|+|+||.+++.++.+ .+..++++|+.+|++++...... ...+
T Consensus 91 -~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~--~~~~ 167 (276)
T 3hxk_A 91 -NFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPS--DLSH 167 (276)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSS--SSSS
T ss_pred -CcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCc--chhh
Confidence 111234689999999998763 3688999999999999999999988 78899999999999886553211 1111
Q ss_pred hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 685 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 685 ~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
..+- +.. . ..++|...+.. +..| +|++||++|..||+.++.+++++|+.. +.++++.+++
T Consensus 168 -~~~~-~~~---~---~~~~~~~~~~~----~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------~~~~~~~~~~ 227 (276)
T 3hxk_A 168 -FNFE-IEN---I---SEYNISEKVTS----STPP-TFIWHTADDEGVPIYNSLKYCDRLSKH-------QVPFEAHFFE 227 (276)
T ss_dssp -SCCC-CSC---C---GGGBTTTTCCT----TSCC-EEEEEETTCSSSCTHHHHHHHHHHHTT-------TCCEEEEEES
T ss_pred -hhcC-chh---h---hhCChhhcccc----CCCC-EEEEecCCCceeChHHHHHHHHHHHHc-------CCCeEEEEEC
Confidence 1111 111 1 45667777665 4555 999999999999999999999999988 8899999999
Q ss_pred CCCccCCc
Q psy2521 765 DAGHGQGK 772 (783)
Q Consensus 765 ~~gHg~~~ 772 (783)
++||++..
T Consensus 228 ~~~H~~~~ 235 (276)
T 3hxk_A 228 SGPHGVSL 235 (276)
T ss_dssp CCCTTCTT
T ss_pred CCCCCccc
Confidence 99999864
|
| >3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.6e-21 Score=192.80 Aligned_cols=207 Identities=17% Similarity=0.181 Sum_probs=152.4
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
.+..+.+.+++ +|..++++++.|++. .++.|+||++||..+... .+ ......|+++||.|+++|+||.|+....
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~~~~p~~~--~~~~p~vv~~HG~~g~~~--~~-~~~~~~l~~~G~~v~~~d~~g~g~~~~~ 76 (241)
T 3f67_A 3 AIIAGETSIPS-QGENMPAYHARPKNA--DGPLPIVIVVQEIFGVHE--HI-RDLCRRLAQEGYLAIAPELYFRQGDPNE 76 (241)
T ss_dssp CEEEEEEEEEE-TTEEEEEEEEEETTC--CSCEEEEEEECCTTCSCH--HH-HHHHHHHHHTTCEEEEECTTTTTCCGGG
T ss_pred cceeeeEEEec-CCcceEEEEecCCCC--CCCCCEEEEEcCcCccCH--HH-HHHHHHHHHCCcEEEEecccccCCCCCc
Confidence 45678888988 899999999999863 367899999999766542 22 2344556667999999999986654433
Q ss_pred HHhhcc-------ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 603 WHNAGR-------LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 603 ~~~~g~-------~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
+..... ........+|+.+++++|.+++ +|++||+++|+|+||.+++.++.++|+ +.++++..|......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~~- 153 (241)
T 3f67_A 77 YHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGEK- 153 (241)
T ss_dssp CCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCCC-
T ss_pred hhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCCC-
Confidence 221110 1111245789999999999887 888999999999999999999999998 566666555321100
Q ss_pred ccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC
Q psy2521 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 755 (783)
Q Consensus 676 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 755 (783)
.. +...+|...+.. +..| +|+++|++|..|++.++.+++++|++. +
T Consensus 154 ------~~----------------~~~~~~~~~~~~----~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~-------~ 199 (241)
T 3f67_A 154 ------SL----------------NSPKHPVDIAVD----LNAP-VLGLYGAKDASIPQDTVETMRQALRAA-------N 199 (241)
T ss_dssp ------CS----------------SSCCCHHHHGGG----CCSC-EEEEEETTCTTSCHHHHHHHHHHHHHT-------T
T ss_pred ------cc----------------CCccCHHHhhhh----cCCC-EEEEEecCCCCCCHHHHHHHHHHHHHc-------C
Confidence 00 011223333332 3445 999999999999999999999999988 7
Q ss_pred CcEEEEEeCCCCccCCc
Q psy2521 756 NPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 756 ~~~~l~~~~~~gHg~~~ 772 (783)
.++++.+++++||++..
T Consensus 200 ~~~~~~~~~~~~H~~~~ 216 (241)
T 3f67_A 200 ATAEIVVYPEADHAFNA 216 (241)
T ss_dssp CSEEEEEETTCCTTTTC
T ss_pred CCcEEEEECCCCcceec
Confidence 88999999999999863
|
| >3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=206.17 Aligned_cols=197 Identities=15% Similarity=0.204 Sum_probs=159.6
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcC--------cH-HHHHHHHcCCEEEEEecCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTF--------SI-SRCMFLRHFNGIYAIPNIR 594 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~--------~~-~~~~~l~~~G~~v~~~~~R 594 (783)
..+.+.|.+. ||..+++.++.|+++.+.++.|+||++||+.+....+.. .. ....+....|+.++.+|+|
T Consensus 143 ~~~~~~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~ 222 (380)
T 3doh_A 143 DFLAFTFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCP 222 (380)
T ss_dssp GEEEEEEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCC
T ss_pred cccceeeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCC
Confidence 3577888998 999999999999987667889999999998755332110 00 0112334568899999999
Q ss_pred CCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh
Q psy2521 595 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674 (783)
Q Consensus 595 G~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~ 674 (783)
|++++|..|...+........+.|+.+++++++++..+|++||+|+|+|+||++++.++.++|++|+++|+.+|..+...
T Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~~~ 302 (380)
T 3doh_A 223 PNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDVSK 302 (380)
T ss_dssp TTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCChhh
Confidence 99999998887655555567889999999999988778999999999999999999999999999999999998752110
Q ss_pred cccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCC
Q psy2521 675 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 675 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 754 (783)
+..++ ..| +|++||+.|..||+.++.+++++|++.
T Consensus 303 -------------------------------~~~~~------~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~------- 337 (380)
T 3doh_A 303 -------------------------------VERIK------DIP-IWVFHAEDDPVVPVENSRVLVKKLAEI------- 337 (380)
T ss_dssp -------------------------------GGGGT------TSC-EEEEEETTCSSSCTHHHHHHHHHHHHT-------
T ss_pred -------------------------------hhhcc------CCC-EEEEecCCCCccCHHHHHHHHHHHHHC-------
Confidence 01111 133 999999999999999999999999998
Q ss_pred CCcEEEEEeCCC
Q psy2521 755 KNPLLLRVEQDA 766 (783)
Q Consensus 755 ~~~~~l~~~~~~ 766 (783)
|.++++.+++++
T Consensus 338 g~~~~~~~~~~~ 349 (380)
T 3doh_A 338 GGKVRYTEYEKG 349 (380)
T ss_dssp TCCEEEEEECTT
T ss_pred CCceEEEEecCC
Confidence 889999999999
|
| >1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-21 Score=202.77 Aligned_cols=228 Identities=17% Similarity=0.093 Sum_probs=158.2
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC-ccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+..+.+.+++.||.+|+++++.|++ .++.|+||++||+.+. ... +. ....+ +++||.|+++|+||.|+.+
T Consensus 52 ~~~~~~~~~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~~--~~-~~~~l-~~~g~~v~~~d~rg~g~s~ 124 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDGE--IH-EMVNW-ALHGYATFGMLVRGQQRSE 124 (318)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGGG--HH-HHHHH-HHTTCEEEEECCTTTSSSC
T ss_pred CCeEEEEEEEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCCCCC--cc-cccch-hhCCcEEEEecCCCCCCCC
Confidence 456788999999999999999999986 4678999999998766 432 22 22344 4469999999999988776
Q ss_pred hhHHhhcccc-----CC---------cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 601 EDWHNAGRLL-----KK---------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 601 ~~~~~~g~~~-----~~---------~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
..+...+... .+ ...++|+.+++++|.++..+|++||+++|+|+||.+++.++.++|++ +++|+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~-~~~v~~ 203 (318)
T 1l7a_A 125 DTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIP-KAAVAD 203 (318)
T ss_dssp CCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCC-SEEEEE
T ss_pred CcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCCc-cEEEec
Confidence 4432111000 00 23478999999999998878899999999999999999999999974 666777
Q ss_pred CCcch-hhhcccccccccc------hhhhCCCC-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 667 VGALD-MLRFNKFTIAYYS------ESEFGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 667 ~~~~d-~~~~~~~~~~~~~------~~~~g~p~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
+|+++ +...........| ...++.+. ..+.+..+..++|...+.. +..| +|+++|.+|..|++.++.
T Consensus 204 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~li~~g~~D~~~~~~~~~ 278 (318)
T 1l7a_A 204 YPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR----VKVP-VLMSIGLIDKVTPPSTVF 278 (318)
T ss_dssp SCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGG----CCSC-EEEEEETTCSSSCHHHHH
T ss_pred CCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhh----CCCC-EEEEeccCCCCCCcccHH
Confidence 88643 3222111100011 11111121 1222333444556554444 5555 999999999999999998
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
++++++. .++++.+++++||+...
T Consensus 279 ~~~~~l~----------~~~~~~~~~~~~H~~~~ 302 (318)
T 1l7a_A 279 AAYNHLE----------TKKELKVYRYFGHEYIP 302 (318)
T ss_dssp HHHHHCC----------SSEEEEEETTCCSSCCH
T ss_pred HHHhhcC----------CCeeEEEccCCCCCCcc
Confidence 8887764 24789999999999543
|
| >3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.1e-20 Score=198.96 Aligned_cols=223 Identities=14% Similarity=0.148 Sum_probs=150.2
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEE-ecCc--------------------CCCCCccEEEEecCCCCCccCCc---CcHHH
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIH-RVGA--------------------LRNRRNPVIIYGYGGYGVSVLPT---FSISR 577 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~-p~~~--------------------~~~~~~P~ll~~hGg~~~~~~~~---~~~~~ 577 (783)
..+..+.+.+.+.+| +.+.++. |++. ...++.|+|||+|||........ |....
T Consensus 60 ~~v~~~dv~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~ 137 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLC 137 (365)
T ss_dssp TTEEEEEEEEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHH
T ss_pred CCCceeeEEecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHH
Confidence 456789999999999 6666776 7652 23467899999999854332222 33323
Q ss_pred HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChhHHHHHHH
Q psy2521 578 CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK----YTKPK-YITIMGGSNGGLLVGAC 652 (783)
Q Consensus 578 ~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~----~~d~~-ri~i~G~S~GG~l~~~~ 652 (783)
..+..+.|++|+.+|||++++.+ ....++|+.++++||+++. .+|++ ||+|+|+|+||++++.+
T Consensus 138 ~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~ 206 (365)
T 3ebl_A 138 RRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHV 206 (365)
T ss_dssp HHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHH
T ss_pred HHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHH
Confidence 33333349999999999976543 1234789999999999765 58999 99999999999999999
Q ss_pred HhcCCC---ceeEEEEcCCcchhhhcccccc-------------cccchhhhCCCCCHHHHHHHHhcCccc-CCCCCCCC
Q psy2521 653 LNQRPE---LYGAALILVGALDMLRFNKFTI-------------AYYSESEFGSPNNKTHFHNLLSYSPLH-NIKVPPNN 715 (783)
Q Consensus 653 ~~~~p~---lf~a~i~~~~~~d~~~~~~~~~-------------~~~~~~~~g~p~~~~~~~~~~~~sp~~-~v~~~~~~ 715 (783)
+.+.++ .++++|+.+|++|......... ...|....+...... ....+|+. .....+ +
T Consensus 207 a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~l~-~ 281 (365)
T 3ebl_A 207 AVRAADEGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRD----HPACNPFGPNGRRLG-G 281 (365)
T ss_dssp HHHHHHTTCCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHHHHSCTTCCTT----STTTCTTSTTCCCCT-T
T ss_pred HHHHHhcCCceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHHHhCCCCCCCC----CcccCCCCCcchhhc-c
Confidence 987665 7899999999988643211000 000000001000000 01123332 111110 1
Q ss_pred CcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 716 TQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 716 ~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+.+||+||+||+.|..+ .++.+++++|++. |.++++.+|+++||+|.
T Consensus 282 ~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~-------g~~v~l~~~~g~~H~f~ 328 (365)
T 3ebl_A 282 LPFAKSLIIVSGLDLTC--DRQLAYADALRED-------GHHVKVVQCENATVGFY 328 (365)
T ss_dssp SCCCCEEEEEETTSTTH--HHHHHHHHHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred CCCCCEEEEEcCcccch--hHHHHHHHHHHHC-------CCCEEEEEECCCcEEEe
Confidence 35678999999999654 5678999999998 89999999999999985
|
| >3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.7e-20 Score=194.00 Aligned_cols=214 Identities=16% Similarity=0.043 Sum_probs=154.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCc---CCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGA---LRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~---~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+++.+.+.+|..+++.++ |+.. ...++.|+||++|||...... ..|. .+...|+++||.|+++|+||.++.+
T Consensus 18 ~~~~v~~~~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 18 QGMQVIKQKLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAE-SLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp CSSEEEEEECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHH-HHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CCcceEEeecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccH-HHHHHHHhCCcEEEEEeccCCCccc
Confidence 45667888889988888888 7652 135788999999997532222 2233 2445666679999999999976542
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCCc-------------eeEEE
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL-------------YGAAL 664 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~l-------------f~a~i 664 (783)
........|+.++++||.+.. .+++++|+|+|+|+||.+++.++.++|+. ++++|
T Consensus 96 ---------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v 166 (283)
T 3bjr_A 96 ---------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVV 166 (283)
T ss_dssp ---------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEE
T ss_pred ---------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEE
Confidence 111234679999999998753 36788999999999999999999999987 89999
Q ss_pred EcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHH
Q psy2521 665 ILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL 744 (783)
Q Consensus 665 ~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L 744 (783)
+.+|++++........ ..+...++ .+...+|...+.. +..| +|+++|++|..||+.++.+++++|
T Consensus 167 ~~~p~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~p~~~~~~~~~~l 231 (283)
T 3bjr_A 167 LGYPVISPLLGFPKDD-ATLATWTP---------TPNELAADQHVNS----DNQP-TFIWTTADDPIVPATNTLAYATAL 231 (283)
T ss_dssp EESCCCCTTSBC---------CCCC---------CGGGGCGGGSCCT----TCCC-EEEEEESCCTTSCTHHHHHHHHHH
T ss_pred EcCCcccccccccccc-chHHHHHH---------HhHhcCHHHhccC----CCCC-EEEEEcCCCCCCChHHHHHHHHHH
Confidence 9999887543211000 00100011 1235566666654 4556 999999999999999999999999
Q ss_pred HhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 745 QEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 745 ~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+.. +.++++.+++++||++.
T Consensus 232 ~~~-------g~~~~~~~~~~~~H~~~ 251 (283)
T 3bjr_A 232 ATA-------KIPYELHVFKHGPHGLA 251 (283)
T ss_dssp HHT-------TCCEEEEEECCCSHHHH
T ss_pred HHC-------CCCeEEEEeCCCCcccc
Confidence 988 88999999999999875
|
| >3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=200.79 Aligned_cols=234 Identities=18% Similarity=0.175 Sum_probs=164.7
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
..+..+++++.+.||.+|+++++.|++ .++.|+||++||+.+....+. . ...++. +||.|+++|+||.|+.+.
T Consensus 78 ~~~~~~~~~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~~~--~-~~~~~~-~G~~v~~~D~rG~g~s~~ 150 (346)
T 3fcy_A 78 SFAECYDLYFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNSGDWN--D-KLNYVA-AGFTVVAMDVRGQGGQSQ 150 (346)
T ss_dssp TTEEEEEEEEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCSCCSG--G-GHHHHT-TTCEEEEECCTTSSSSCC
T ss_pred CceEEEEEEEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCCCChh--h-hhHHHh-CCcEEEEEcCCCCCCCCC
Confidence 456889999999999999999999986 467899999999987665433 2 225554 699999999999876654
Q ss_pred hHHhh------ccccC----------CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 602 DWHNA------GRLLK----------KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 602 ~~~~~------g~~~~----------~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
..... +.... -...++|+.++++++.....+|++||+|+|+|+||.+++.++.++|+ ++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl 229 (346)
T 3fcy_A 151 DVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVS 229 (346)
T ss_dssp CCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEE
T ss_pred CCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEE
Confidence 32110 00000 01236899999999998877899999999999999999999999998 899999
Q ss_pred cCCcchhh-hccccc-cc------ccchhhhCCC---CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 666 LVGALDML-RFNKFT-IA------YYSESEFGSP---NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 666 ~~~~~d~~-~~~~~~-~~------~~~~~~~g~p---~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
.+|+++-. ...... .. ..|.. +..| ...+.+..+..+++...++. ++.| +|+++|+.|..|++
T Consensus 230 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~----i~~P-~lii~G~~D~~~~~ 303 (346)
T 3fcy_A 230 EYPFLSDYKRVWDLDLAKNAYQEITDYFR-LFDPRHERENEVFTKLGYIDVKNLAKR----IKGD-VLMCVGLMDQVCPP 303 (346)
T ss_dssp ESCSSCCHHHHHHTTCCCGGGHHHHHHHH-HHCTTCTTHHHHHHHHGGGCHHHHGGG----CCSE-EEEEEETTCSSSCH
T ss_pred CCCcccCHHHHhhccccccchHHHHHHHH-hcCCCcchHHHHHHHhCcccHHHHHHh----cCCC-EEEEeeCCCCcCCH
Confidence 99975422 211111 00 01111 1122 12233444445555544444 5666 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
.++.++++++. .++++.+++++||++.....+.+.
T Consensus 304 ~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~~~~~~i~ 338 (346)
T 3fcy_A 304 STVFAAYNNIQ----------SKKDIKVYPDYGHEPMRGFGDLAM 338 (346)
T ss_dssp HHHHHHHTTCC----------SSEEEEEETTCCSSCCTTHHHHHH
T ss_pred HHHHHHHHhcC----------CCcEEEEeCCCCCcCHHHHHHHHH
Confidence 98877766543 267899999999998754444443
|
| >2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=194.27 Aligned_cols=219 Identities=16% Similarity=0.093 Sum_probs=153.3
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcC--------------CCCCccEEEEecCCCCCccCCc---CcHHHHHHHH-c
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGAL--------------RNRRNPVIIYGYGGYGVSVLPT---FSISRCMFLR-H 583 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~--------------~~~~~P~ll~~hGg~~~~~~~~---~~~~~~~~l~-~ 583 (783)
..+..+.+.+.+ +..+++.++.|++.. ..++.|+||++|||........ |... ...|+ +
T Consensus 68 ~~v~~~dv~~~~--~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~-~~~la~~ 144 (351)
T 2zsh_A 68 DGVFSFDVLIDR--RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTL-CRRLVGL 144 (351)
T ss_dssp TTEEEEEEEEET--TTTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHH-HHHHHHH
T ss_pred CCceEEEEEecC--CCCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHH-HHHHHHH
Confidence 345677787765 556888899998642 2467899999999754332221 3333 34454 5
Q ss_pred CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC----CCCCC-cEEEEEeChhHHHHHHHHhcCCC
Q psy2521 584 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK----YTKPK-YITIMGGSNGGLLVGACLNQRPE 658 (783)
Q Consensus 584 ~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~----~~d~~-ri~i~G~S~GG~l~~~~~~~~p~ 658 (783)
.||+|+.+|+||+++.. ....++|+.++++||+++. .+|++ ||+|+|+|+||.+++.++.++|+
T Consensus 145 ~g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~ 213 (351)
T 2zsh_A 145 CKCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE 213 (351)
T ss_dssp HTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHT
T ss_pred cCCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhc
Confidence 69999999999976543 1235789999999999864 47899 99999999999999999999888
Q ss_pred ---ceeEEEEcCCcchhhhcccccccccchhhhCCCC-CHHHHH-HHHh------------cCcc----cCCCCCCCCCc
Q psy2521 659 ---LYGAALILVGALDMLRFNKFTIAYYSESEFGSPN-NKTHFH-NLLS------------YSPL----HNIKVPPNNTQ 717 (783)
Q Consensus 659 ---lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~-~~~~~~-~~~~------------~sp~----~~v~~~~~~~~ 717 (783)
.++++|+.+|+++...... ......+.+. ...... .+.. .+|+ .+++. +.
T Consensus 214 ~~~~v~~~vl~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~ 284 (351)
T 2zsh_A 214 SGIDVLGNILLNPMFGGNERTE-----SEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEG----VS 284 (351)
T ss_dssp TTCCCCEEEEESCCCCCSSCCH-----HHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTT----CC
T ss_pred cCCCeeEEEEECCccCCCcCCh-----hhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhh----CC
Confidence 8999999999887543211 0000111111 111111 0111 1222 12222 46
Q ss_pred CCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 718 YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 718 ~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+||+||++|++|..++ ++.+++++|++. +.++++.+++++||++..
T Consensus 285 ~pP~Lii~G~~D~~~~--~~~~~~~~l~~~-------g~~~~~~~~~g~gH~~~~ 330 (351)
T 2zsh_A 285 FPKSLVVVAGLDLIRD--WQLAYAEGLKKA-------GQEVKLMHLEKATVGFYL 330 (351)
T ss_dssp CCEEEEEEETTSTTHH--HHHHHHHHHHHT-------TCCEEEEEETTCCTTTTS
T ss_pred CCCEEEEEcCCCcchH--HHHHHHHHHHHc-------CCCEEEEEECCCcEEEEe
Confidence 7679999999999875 678899999988 889999999999999864
|
| >4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-19 Score=187.29 Aligned_cols=197 Identities=15% Similarity=0.110 Sum_probs=126.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
+.|+.+....||.+||++++.|++ .++.|+||++||+.+....+.+.. ..++|+++||+|+.+|+||+|+.+....
T Consensus 29 ~~e~~~~~~~dG~~i~g~l~~P~~---~~~~p~Vl~~HG~g~~~~~~~~~~-~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 29 VQERGFSLEVDGRTVPGVYWSPAE---GSSDRLVLLGHGGTTHKKVEYIEQ-VAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS---SCCSEEEEEEC--------CHHHH-HHHHHHHTTEEEEEECCCC---------
T ss_pred ceEEEEEEeeCCeEEEEEEEeCCC---CCCCCEEEEeCCCcccccchHHHH-HHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 455555556899999999999987 357799999999987655544443 4566777899999999999876654332
Q ss_pred hhcccc---------------CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 605 NAGRLL---------------KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 605 ~~g~~~---------------~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...... .....+.|..+++++|... +|++||+++|+|+||++++.++...|++ +|++...+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pri-~Aav~~~~~ 181 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKRI-KVALLGLMG 181 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTTE-EEEEEESCC
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCce-EEEEEeccc
Confidence 211110 0112356788888888654 7889999999999999999999999976 455443332
Q ss_pred chhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhC
Q psy2521 670 LDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 749 (783)
Q Consensus 670 ~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 749 (783)
.+... .. ++...++. +++| +||+||+.|++||+.++.+++++|...
T Consensus 182 ~~~~~-------------------~~--------~~~~~a~~----i~~P-~Li~hG~~D~~vp~~~~~~l~~al~~~-- 227 (259)
T 4ao6_A 182 VEGVN-------------------GE--------DLVRLAPQ----VTCP-VRYLLQWDDELVSLQSGLELFGKLGTK-- 227 (259)
T ss_dssp TTSTT-------------------HH--------HHHHHGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHCCCS--
T ss_pred ccccc-------------------cc--------chhhhhcc----CCCC-EEEEecCCCCCCCHHHHHHHHHHhCCC--
Confidence 21100 00 01112222 4556 999999999999999999999888533
Q ss_pred CCCCCCCcEEEEEeCCCCccC
Q psy2521 750 SLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 750 ~~~~~~~~~~l~~~~~~gHg~ 770 (783)
...++++++ +|..
T Consensus 228 -------~k~l~~~~G-~H~~ 240 (259)
T 4ao6_A 228 -------QKTLHVNPG-KHSA 240 (259)
T ss_dssp -------SEEEEEESS-CTTC
T ss_pred -------CeEEEEeCC-CCCC
Confidence 457888887 5643
|
| >3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=198.26 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=154.8
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC-ccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+.++.+++++.||..|++.++.|++ ++.|+||++|||... .....+......+..+.|++|+.+|||++++..
T Consensus 56 ~~~~~~~~~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 56 AGVAVADDVVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp HCCEEEEEEEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CcceEEEEEecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 356789999999999999999999875 578999999996432 233334444445554569999999999977643
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhh
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDML 673 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~ 673 (783)
....++|+.++++||.++ ..+|++||+|+|+|+||.+++.++.+.++ .++++++.+|++|..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 123478999999999885 34789999999999999999999887655 489999999999875
Q ss_pred hcccccccccchhhhCC-C-CCHHH----HHHHH-------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHH
Q psy2521 674 RFNKFTIAYYSESEFGS-P-NNKTH----FHNLL-------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKF 740 (783)
Q Consensus 674 ~~~~~~~~~~~~~~~g~-p-~~~~~----~~~~~-------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~ 740 (783)
.... ..++.. + ..... +..+. ..+|.....- ...||+||+||+.|..++ ++.++
T Consensus 201 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l----~~lpP~li~~G~~D~~~~--~~~~~ 267 (317)
T 3qh4_A 201 PTAS-------RSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQL----AGLPATLITCGEIDPFRD--EVLDY 267 (317)
T ss_dssp CCHH-------HHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCC----TTCCCEEEEEEEESTTHH--HHHHH
T ss_pred CCcC-------HHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCccccc----CCCCceeEEecCcCCCch--hHHHH
Confidence 1100 011110 1 11111 11111 1233322111 245679999999998864 78999
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 741 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 741 ~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+++|++. |.++++++|++++|+|.
T Consensus 268 a~~l~~~-------g~~~~l~~~~g~~H~f~ 291 (317)
T 3qh4_A 268 AQRLLGA-------GVSTELHIFPRACHGFD 291 (317)
T ss_dssp HHHHHHT-------TCCEEEEEEEEEETTHH
T ss_pred HHHHHHc-------CCCEEEEEeCCCccchh
Confidence 9999998 89999999999999964
|
| >3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-20 Score=195.09 Aligned_cols=231 Identities=15% Similarity=0.099 Sum_probs=150.6
Q ss_pred eEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCC------
Q psy2521 525 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG------ 597 (783)
Q Consensus 525 ~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g------ 597 (783)
..+++.+.+ .+|.++++.++.|++....++.|+||++||+.+....+........+++++|++|+++|.++.|
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~ 93 (280)
T 3ls2_A 14 WHKQYTHSAVSTHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNE 93 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred eEEEEEEechhcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccc
Confidence 455666655 5789999999999987667889999999998665432211111235566679999999976533
Q ss_pred -----CCChhHHhhcccc--CCcChHHH-HHH-HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 598 -----ELGEDWHNAGRLL--KKQNCFDD-FQA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 598 -----~~G~~~~~~g~~~--~~~~~~~D-~~a-~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+.|..|+...... .....+.+ +.. .+.++.+. +..++|++|+|+|+||++++.++.++|++|+++++.+|
T Consensus 94 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 172 (280)
T 3ls2_A 94 DSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQH-FPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSP 172 (280)
T ss_dssp SCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHH-SSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESC
T ss_pred cccccccCCccccccccccccccccHHHHHHHHHHHHHHhh-CCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecC
Confidence 1223332221110 01112233 332 33444433 33358999999999999999999999999999999999
Q ss_pred cchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH-HHHHHHHHHhh
Q psy2521 669 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEK 747 (783)
Q Consensus 669 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~~ 747 (783)
++++...... ...+...+|.. .+ .+..++|...++..+.... +|+||+||+.|..|+... +.+++++|++.
T Consensus 173 ~~~~~~~~~~--~~~~~~~~g~~--~~---~~~~~~~~~~~~~~~~~~~-~p~li~~G~~D~~v~~~~~~~~~~~~l~~~ 244 (280)
T 3ls2_A 173 IVNPINCPWG--VKAFTGYLGAD--KT---TWAQYDSCKLMAKAEQSNY-LPMLVSQGDADNFLDEQLKPQNLVAVAKQK 244 (280)
T ss_dssp CSCGGGSHHH--HHHHHHHHCSC--GG---GTGGGCHHHHHHTCCGGGC-CCEEEEEETTCTTCCCCCCHHHHHHHHHHH
T ss_pred ccCcccCcch--hhHHHhhcCch--HH---HHHhcCHHHHHHhccccCC-CcEEEEEeCCCcccCCchhHHHHHHHHHHh
Confidence 9886432100 00111223321 11 1234555544433100012 349999999999999854 88999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 748 IGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 748 ~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++.++++++|++.
T Consensus 245 -------g~~~~~~~~~g~~H~~~ 261 (280)
T 3ls2_A 245 -------DYPLTLEMQTGYDHSYF 261 (280)
T ss_dssp -------TCCEEEEEETTCCSSHH
T ss_pred -------CCCceEEEeCCCCCchh
Confidence 88999999999999874
|
| >3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-20 Score=196.15 Aligned_cols=230 Identities=17% Similarity=0.145 Sum_probs=147.7
Q ss_pred eEEEEEEE-CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--CCCCCCCh
Q psy2521 525 QTKQVYFR-SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGELGE 601 (783)
Q Consensus 525 ~~~~~~~~-s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~G~ 601 (783)
..+.+.+. ..+|..+++.++.|++.. .++.|+||++||+.+....+........+++++||+|+++|+ ||.+..|.
T Consensus 15 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~ 93 (282)
T 3fcx_A 15 LQKVFEHDSVELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGE 93 (282)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC---
T ss_pred cEEEEEEEchhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCccccccc
Confidence 34444444 457899999999998753 368999999999876653321111123556667999999999 88776553
Q ss_pred h----------HHhhccccC---CcChHHHHH-HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 602 D----------WHNAGRLLK---KQNCFDDFQ-AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 602 ~----------~~~~g~~~~---~~~~~~D~~-a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
. |+....... .....+++. +.++++.++--+|++||+|+|+|+||++++.++.++|++|+++++.+
T Consensus 94 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s 173 (282)
T 3fcx_A 94 DESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFA 173 (282)
T ss_dssp -----CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEES
T ss_pred cccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeC
Confidence 2 111110000 001233344 34444443434789999999999999999999999999999999999
Q ss_pred CcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH--HHHHHHHHH
Q psy2521 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH--SYKFIATLQ 745 (783)
Q Consensus 668 ~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~--~~~~~~~L~ 745 (783)
|++++...... ...+...+|.... .+..++|...+.... +...| +|++||+.|..|++.+ +.+++++|+
T Consensus 174 ~~~~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~p-~li~~G~~D~~v~~~~~~~~~~~~~l~ 244 (282)
T 3fcx_A 174 PICNPVLCPWG--KKAFSGYLGTDQS-----KWKAYDATHLVKSYP-GSQLD-ILIDQGKDDQFLLDGQLLPDNFIAACT 244 (282)
T ss_dssp CCCCGGGSHHH--HHHHHHHHC---C-----CGGGGCHHHHHTTCC----CC-EEEEEETTCHHHHTTSSCHHHHHHHHH
T ss_pred CccCcccCchh--HHHHHHhcCCchh-----hhhhcCHHHHHHhcc-cCCCc-EEEEcCCCCcccccchhhHHHHHHHHH
Confidence 99876432100 0011122333211 122444443322210 02444 9999999999997665 669999999
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 746 EKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 746 ~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+. |.++++.+++++||++.
T Consensus 245 ~~-------g~~~~~~~~~g~~H~~~ 263 (282)
T 3fcx_A 245 EK-------KIPVVFRLQEDYDHSYY 263 (282)
T ss_dssp HT-------TCCEEEEEETTCCSSHH
T ss_pred Hc-------CCceEEEECCCCCcCHH
Confidence 98 88999999999999974
|
| >3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-19 Score=192.58 Aligned_cols=210 Identities=20% Similarity=0.100 Sum_probs=146.6
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
.....+.+.+ ..|++.++.|++ .++.|+||++|||....... .+......+..+.||+|+.+|||++++..
T Consensus 55 ~~~~~~~~~~-----~~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 126 (322)
T 3fak_A 55 DDIQVEQVTV-----AGCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP 126 (322)
T ss_dssp TTCEEEEEEE-----TTEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred CCeeEEEEee-----CCeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC
Confidence 3445555554 238999999875 35789999999985433222 22222334444459999999999976543
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc----eeEEEEcCCcchhhhcc
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFN 676 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l----f~a~i~~~~~~d~~~~~ 676 (783)
....++|+.++++||+++ .+|++||+|+|+|+||++++.++.+.|+. ++++|+.+|++|+....
T Consensus 127 -----------~~~~~~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~ 194 (322)
T 3fak_A 127 -----------FPAAVEDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTN 194 (322)
T ss_dssp -----------TTHHHHHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCC
T ss_pred -----------CCcHHHHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCC
Confidence 123468999999999988 57999999999999999999998876653 89999999999875432
Q ss_pred cccccccchhhhC--CC-CCHHHHH----HH--------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHH
Q psy2521 677 KFTIAYYSESEFG--SP-NNKTHFH----NL--------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 677 ~~~~~~~~~~~~g--~p-~~~~~~~----~~--------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~ 741 (783)
. .+ .++. .+ .....+. .+ ...||+...- ...||+||+||+.|.. ..++.+++
T Consensus 195 ~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~~~pP~li~~g~~D~~--~~~~~~~~ 261 (322)
T 3fak_A 195 D-----SF-KTRAEADPMVAPGGINKMAARYLNGADAKHPYASPNFANL-----KGLPPLLIHVGRDEVL--LDDSIKLD 261 (322)
T ss_dssp T-----HH-HHTTTTCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCC-----TTCCCEEEEEETTSTT--HHHHHHHH
T ss_pred c-----CH-HHhCccCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccc-----cCCChHhEEEcCcCcc--HHHHHHHH
Confidence 1 00 0000 01 0000000 01 1235553322 2456799999999976 46889999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 742 ~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++|++. |.++++.+|++++|+|.
T Consensus 262 ~~l~~~-------g~~~~~~~~~g~~H~~~ 284 (322)
T 3fak_A 262 AKAKAD-------GVKSTLEIWDDMIHVWH 284 (322)
T ss_dssp HHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred HHHHHc-------CCCEEEEEeCCceeehh
Confidence 999999 99999999999999985
|
| >3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.9e-20 Score=192.68 Aligned_cols=228 Identities=15% Similarity=0.074 Sum_probs=151.2
Q ss_pred eEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCC-----
Q psy2521 525 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGE----- 598 (783)
Q Consensus 525 ~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~----- 598 (783)
..+++.+.+ .+|..+++.++.|++....++.|+||++||+.+....+........+++++|++|+++|.|+.|.
T Consensus 16 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~ 95 (280)
T 3i6y_A 16 WHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADD 95 (280)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCC
T ss_pred cEEEEEEeccccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCcc
Confidence 456666655 68899999999999876678899999999987655332111113456666799999999876332
Q ss_pred ------CChhHHhhccccC--CcChHHH-HH-HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 599 ------LGEDWHNAGRLLK--KQNCFDD-FQ-AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 599 ------~G~~~~~~g~~~~--~~~~~~D-~~-a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.|..|+....... ....+.+ +. +.+.++.+...+ ++|++|+|+|+||++++.++.++|++|+++|+.+|
T Consensus 96 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (280)
T 3i6y_A 96 EGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSP 174 (280)
T ss_dssp SSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESC
T ss_pred cccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCC
Confidence 1122221111000 0112233 32 344455444333 68999999999999999999999999999999999
Q ss_pred cchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCc-CCcEEEEecCCCCCCCcHH-HHHHHHHHHh
Q psy2521 669 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLH-SYKFIATLQE 746 (783)
Q Consensus 669 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~-~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~ 746 (783)
++++..... . ...+...+|.. .+ .+..++|...++. .. .+|+||+||+.|..|+... +.+++++|++
T Consensus 175 ~~~~~~~~~-~-~~~~~~~~~~~--~~---~~~~~~~~~~~~~----~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3i6y_A 175 INNPVNCPW-G-QKAFTAYLGKD--TD---TWREYDASLLMRA----AKQYVPALVDQGEADNFLAEQLKPEVLEAAASS 243 (280)
T ss_dssp CCCGGGSHH-H-HHHHHHHHCSC--GG---GTGGGCHHHHHHH----CSSCCCEEEEEETTCTTHHHHTCHHHHHHHHHH
T ss_pred ccccccCch-H-HHHHHHhcCCc--hH---HHHhcCHHHHHHh----cCCCccEEEEEeCCCccccchhhHHHHHHHHHH
Confidence 888643210 0 00111223321 11 1234555544443 22 2349999999999998765 8999999999
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
. |.++++.+++++||++.
T Consensus 244 ~-------g~~~~~~~~~g~~H~~~ 261 (280)
T 3i6y_A 244 N-------NYPLELRSHEGYDHSYY 261 (280)
T ss_dssp T-------TCCEEEEEETTCCSSHH
T ss_pred c-------CCCceEEEeCCCCccHH
Confidence 8 88999999999999873
|
| >1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.7e-19 Score=207.86 Aligned_cols=231 Identities=13% Similarity=0.101 Sum_probs=163.6
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc----cC-CcCcHHHH---HHHHcCCEEEEEec
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS----VL-PTFSISRC---MFLRHFNGIYAIPN 592 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~----~~-~~~~~~~~---~~l~~~G~~v~~~~ 592 (783)
...|..+.+.+++.||.+|.+.++.|++. ++.|+||+.||..+.. .. ..|...+. ++|+++||+|+.+|
T Consensus 20 ~~~~~~~~v~i~~~DG~~L~~~~~~P~~~---~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 20 SNDYIKREVMIPMRDGVKLHTVIVLPKGA---KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred cCCCEEEEEEEECCCCCEEEEEEEeCCCC---CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 34678888999999999999999999863 6789999998643321 01 11111111 45566799999999
Q ss_pred CCCCCCCChhHHhhcc-----ccCCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 593 IRGGGELGEDWHNAGR-----LLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 593 ~RG~g~~G~~~~~~g~-----~~~~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
+||+|+++..+..... ..++....+|+.++++||+++ ++.+ .||+++|+||||+++++++.++|+.|+|+|+.
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~ 175 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPE 175 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEec
Confidence 9998888766543311 122237899999999999998 7776 59999999999999999998889999999999
Q ss_pred CCcchhhh-ccccccc------ccchhhh----------------------------------------------CCCCC
Q psy2521 667 VGALDMLR-FNKFTIA------YYSESEF----------------------------------------------GSPNN 693 (783)
Q Consensus 667 ~~~~d~~~-~~~~~~~------~~~~~~~----------------------------------------------g~p~~ 693 (783)
+|+.|+.. ......+ ..|...+ ..|..
T Consensus 176 ~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 255 (615)
T 1mpx_A 176 SPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAY 255 (615)
T ss_dssp SCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSS
T ss_pred CCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCc
Confidence 99999643 1100000 0111000 00100
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC---cEEEEEeCCCCccC
Q psy2521 694 KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN---PLLLRVEQDAGHGQ 770 (783)
Q Consensus 694 ~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~---~~~l~~~~~~gHg~ 770 (783)
+ ++++..||..++++. .++.| +|++||..|.+ ++.++.+++++|++. |. +..+.+.|. +|++
T Consensus 256 -d--~~w~~~Sp~~~~~~~--~I~~P-~Lii~G~~D~~-~~~~~~~~~~aL~~~-------g~p~~~~~lvigp~-~H~~ 320 (615)
T 1mpx_A 256 -D--AFWQEQALDKVMART--PLKVP-TMWLQGLWDQE-DMWGAIHSYAAMEPR-------DKRNTLNYLVMGPW-RHSQ 320 (615)
T ss_dssp -C--HHHHTTCHHHHHHTS--CCCSC-EEEEEETTCSS-CSSHHHHHHHHHGGG-------CTTSSSEEEEEESC-CTTG
T ss_pred -C--hhhhhcChhhhhhcc--CCCCC-EEEeecccCcc-ccccHHHHHHHHHhh-------cCCCcCCEEEECCC-CCCC
Confidence 0 234567886554320 14566 99999999998 888999999999988 54 488888887 6976
|
| >4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=191.79 Aligned_cols=210 Identities=16% Similarity=0.188 Sum_probs=150.2
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
...+.|. +...++.++.|++. .++.|+||++|||................|+++||+|+++|+||.++.. +
T Consensus 58 ~~~i~y~---~~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~--~-- 128 (303)
T 4e15_A 58 VDHLRYG---EGRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT--L-- 128 (303)
T ss_dssp EEEEECS---STTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC--H--
T ss_pred eeeeccC---CCCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC--h--
Confidence 4555554 44567777788642 5678999999998644333222222345555679999999999976543 1
Q ss_pred hccccCCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCC-------CceeEEEEcCCcchhhhccc
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRP-------ELYGAALILVGALDMLRFNK 677 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p-------~lf~a~i~~~~~~d~~~~~~ 677 (783)
....+|+.++++||.+. ...+++||+|+|+|+||++++.++.+.+ +.++++|+.+|++|+.....
T Consensus 129 -------~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~ 201 (303)
T 4e15_A 129 -------EQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSN 201 (303)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHT
T ss_pred -------hHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhc
Confidence 12367999999999763 2245889999999999999999987654 37999999999998765432
Q ss_pred ccccccchhhhCCCCCHHHHHHHHhcCcc-cCCCCCCCCC----cCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 678 FTIAYYSESEFGSPNNKTHFHNLLSYSPL-HNIKVPPNNT----QYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 678 ~~~~~~~~~~~g~p~~~~~~~~~~~~sp~-~~v~~~~~~~----~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
... ......++... +.+...||+ .++.. + ..| +||+||++|..|++.++.+++++|++.
T Consensus 202 ~~~-~~~~~~~~~~~-----~~~~~~sp~~~~~~~----~~~~~~~P-~lii~G~~D~~v~~~~~~~~~~~l~~~----- 265 (303)
T 4e15_A 202 LES-VNPKNILGLNE-----RNIESVSPMLWEYTD----VTVWNSTK-IYVVAAEHDSTTFIEQSRHYADVLRKK----- 265 (303)
T ss_dssp CTT-TSGGGTTCCCT-----TTTTTTCGGGCCCCC----GGGGTTSE-EEEEEEEESCHHHHHHHHHHHHHHHHH-----
T ss_pred ccc-cchhhhhcCCH-----HHHHHcCchhhcccc----cccCCCCC-EEEEEeCCCCCCchHHHHHHHHHHHHC-----
Confidence 100 01112223221 123567787 45543 3 444 999999999999999999999999999
Q ss_pred CCCCcEEEEEeCCCCcc
Q psy2521 753 YQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg 769 (783)
|.++++.+++++||.
T Consensus 266 --g~~~~~~~~~g~~H~ 280 (303)
T 4e15_A 266 --GYKASFTLFKGYDHF 280 (303)
T ss_dssp --TCCEEEEEEEEEETT
T ss_pred --CCceEEEEeCCCCch
Confidence 889999999999995
|
| >2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-19 Score=208.13 Aligned_cols=230 Identities=13% Similarity=0.055 Sum_probs=162.8
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCc-----HHH--H-HHHHcCCEEEEEec
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFS-----ISR--C-MFLRHFNGIYAIPN 592 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~-----~~~--~-~~l~~~G~~v~~~~ 592 (783)
..+..+.+.+++.||.+|.+.++.|++. ++.|+||+.||..... ....|. ..+ . ++|+++||+|+.+|
T Consensus 33 ~~~~~~~v~i~~~DG~~L~~~l~~P~~~---~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D 109 (652)
T 2b9v_A 33 RDYIKREVMVPMRDGVKLYTVIVIPKNA---RNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQD 109 (652)
T ss_dssp CSEEEEEEEEECTTSCEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCcEEEEEEEECCCCcEEEEEEEecCCC---CCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEe
Confidence 3567888999999999999999999863 6789999988532210 000111 111 1 45566799999999
Q ss_pred CCCCCCCChhHHhhc-----cccCCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 593 IRGGGELGEDWHNAG-----RLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 593 ~RG~g~~G~~~~~~g-----~~~~~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
+||+|+++..|.... ...++....+|+.++++||+++ ++.+ .||+++|+|+||++++.++.++|+.|+|+|+.
T Consensus 110 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~ 188 (652)
T 2b9v_A 110 IRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 188 (652)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEec
Confidence 999988887765432 1112237899999999999999 8887 59999999999999999999889999999999
Q ss_pred CCcchhhh-ccccccc------ccchhhh----------------------------------------------CCCCC
Q psy2521 667 VGALDMLR-FNKFTIA------YYSESEF----------------------------------------------GSPNN 693 (783)
Q Consensus 667 ~~~~d~~~-~~~~~~~------~~~~~~~----------------------------------------------g~p~~ 693 (783)
+|+.|+.. ......+ ..|...+ +.|..
T Consensus 189 ~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 268 (652)
T 2b9v_A 189 SPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAY 268 (652)
T ss_dssp EECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSS
T ss_pred ccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCC
Confidence 99999754 1100000 0111000 01110
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEEEeCCCCccC
Q psy2521 694 KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK--NPLLLRVEQDAGHGQ 770 (783)
Q Consensus 694 ~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~--~~~~l~~~~~~gHg~ 770 (783)
+ ++++..||..++++. .++.| +|++||..|.+ +..++.+++++|++. + .+..+.+.+. +|+.
T Consensus 269 -d--~yw~~~Sp~~~~~~~--~I~~P-vLiv~G~~D~~-~~~~~~~~~~aL~~~-------g~~~~~~lvigp~-~H~~ 332 (652)
T 2b9v_A 269 -D--AFWQGQALDKILAQR--KPTVP-MLWEQGLWDQE-DMWGAIHAWQALKDA-------DVKAPNTLVMGPW-RHSG 332 (652)
T ss_dssp -S--HHHHTTCHHHHHHHH--CCCSC-EEEEEETTCSS-CSSHHHHHHHHHHHT-------TCSSCEEEEEESC-CTTG
T ss_pred -C--hHHhcCChhhhhhcC--CCCCC-EEEEeecCCcc-ccccHHHHHHHHHhc-------CCCCCCEEEECCC-CCCC
Confidence 0 124556776443320 04556 99999999998 678899999999988 6 7888888886 7986
|
| >3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.9e-18 Score=183.49 Aligned_cols=215 Identities=14% Similarity=0.128 Sum_probs=152.7
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC-ccCCcCcHHHHHHHH-cCCEEEEEecCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLR-HFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~ 599 (783)
....++.+.+++.+| .|++.++.|++ .++.|+||++|||... .....|... ...|+ +.||.|+.+|+||.++.
T Consensus 61 ~~~~~~~~~i~~~~~-~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~-~~~La~~~g~~Vv~~Dyrg~~~~ 135 (323)
T 3ain_A 61 EVGKIEDITIPGSET-NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPL-CRAITNSCQCVTISVDYRLAPEN 135 (323)
T ss_dssp CCSEEEEEEEECSSS-EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHH-HHHHHHHHTSEEEEECCCCTTTS
T ss_pred CccEEEEEEecCCCC-eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHH-HHHHHHhcCCEEEEecCCCCCCC
Confidence 456889999998888 89999999976 4678999999997532 222334433 34454 34999999999997764
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCC--CCCCcEEEEEeChhHHHHHHHHhcCCCce---eEEEEcCCcchhhh
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY--TKPKYITIMGGSNGGLLVGACLNQRPELY---GAALILVGALDMLR 674 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~--~d~~ri~i~G~S~GG~l~~~~~~~~p~lf---~a~i~~~~~~d~~~ 674 (783)
. ....++|+.++++||.+... .|++||+|+|+|+||.+++.++.++|+.. +++|+.+|++|...
T Consensus 136 ~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~ 204 (323)
T 3ain_A 136 K-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDL 204 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCS
T ss_pred C-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCC
Confidence 3 12347899999999987621 18899999999999999999998888765 89999999887542
Q ss_pred cccccccccchhhhCC-C-CCHHHHHH-------------HHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHH
Q psy2521 675 FNKFTIAYYSESEFGS-P-NNKTHFHN-------------LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYK 739 (783)
Q Consensus 675 ~~~~~~~~~~~~~~g~-p-~~~~~~~~-------------~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~ 739 (783)
... .+ ..+.. + ...+.... ....+|+.. .- ...||+||++|+.|..+ .++.+
T Consensus 205 ~~~-----~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l----~~l~P~lii~G~~D~l~--~~~~~ 271 (323)
T 3ain_A 205 ITK-----SL-YDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILA-DL----NDLPPALIITAEHDPLR--DQGEA 271 (323)
T ss_dssp CCH-----HH-HHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGS-CC----TTCCCEEEEEETTCTTH--HHHHH
T ss_pred CCc-----cH-HHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccC-cc----cCCCHHHEEECCCCccH--HHHHH
Confidence 210 00 01100 0 01111000 012355543 21 23456999999999987 57889
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 740 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 740 ~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
++++|+.. |.++++.+++++||++..
T Consensus 272 ~a~~l~~a-------g~~~~~~~~~g~~H~~~~ 297 (323)
T 3ain_A 272 YANKLLQS-------GVQVTSVGFNNVIHGFVS 297 (323)
T ss_dssp HHHHHHHT-------TCCEEEEEETTCCTTGGG
T ss_pred HHHHHHHc-------CCCEEEEEECCCcccccc
Confidence 99999988 889999999999999864
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-17 Score=175.27 Aligned_cols=298 Identities=9% Similarity=0.070 Sum_probs=193.3
Q ss_pred HHhhcCCCccCCcEEeCCeEEEEEEcC----CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEE
Q psy2521 151 LLRMANYEKYSAPQRQENNYFYFHNKG----LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYC 226 (783)
Q Consensus 151 ~~~~~~~~~~~~p~~~G~~~yy~~~~~----~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~ 226 (783)
+++++....++.|..+|.+++|..+.. ......||+.+..+++.+.| . .+..++|||||++|||.
T Consensus 8 ~~~l~~~~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~--------~~~~~~~SpDg~~la~~ 76 (347)
T 2gop_A 8 EKTFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---E--------NATMPRISPDGKKIAFM 76 (347)
T ss_dssp --CCCCSCEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---E--------SCEEEEECTTSSEEEEE
T ss_pred cccceeeEEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---c--------cCCCeEECCCCCEEEEE
Confidence 445566666677777999999987643 22367889888756665554 1 14678999999999999
Q ss_pred EecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCC-----------CCCcccccCCceEE
Q psy2521 227 LSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTA-----------DGTETTAHMGQKIY 295 (783)
Q Consensus 227 ~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~-----------~g~~~~~~~~~~v~ 295 (783)
....+....+||++|+++|+....+.... ...+.|||||+.|+|...+...... .|.........+||
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 155 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFW 155 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEE
T ss_pred EeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEE
Confidence 88765556889999999998765543333 5789999999999999854210000 00000001135799
Q ss_pred EEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC------CcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 296 YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ------GSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 296 ~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~------~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
++++.++... ..+.. + ....+.||||| +++....... ..+||++| ++. ...+..+
T Consensus 156 ~~d~~~~~~~-~~l~~-~----~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~---------~~~l~~~ 216 (347)
T 2gop_A 156 IFDTESEEVI-EEFEK-P----RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK---------EEKMFEK 216 (347)
T ss_dssp EEETTTTEEE-EEEEE-E----TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE---------EEEEEEE
T ss_pred EEECCCCeEE-eeecC-C----CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc---------eEEeccC
Confidence 9998765320 22322 2 12468999999 6666544321 46899999 421 2334433
Q ss_pred ccceeEEEEeeCCEEEEEECCCC----CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNA----PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~----~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.....++|||++|++.++... ...+|+.+| ++. ++.+++..+..+.....+.+ + +++....++..+|
T Consensus 217 --~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~sd-g-~~~~~~~~~~~~l 287 (347)
T 2gop_A 217 --VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIKDG-K-VYFTLFEEGSVNL 287 (347)
T ss_dssp --ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEETT-E-EEEEEEETTEEEE
T ss_pred --cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc---eEeccccCCcccCCccEEcC-c-EEEEEecCCcEEE
Confidence 222335999999999886542 356899999 333 45566554333332133444 5 8888888888888
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEe
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 495 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d 495 (783)
+ ++ +|+. ..+....+.+..+++++ .++++.++..+|.++|.+|
T Consensus 288 ~-~~--~g~~-~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 288 Y-IW--DGEI-KPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp E-EE--SSSE-EEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred E-Ec--CCce-EEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 8 87 5765 34433366777787777 5888999999999999987
|
| >3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=188.81 Aligned_cols=229 Identities=12% Similarity=0.078 Sum_probs=153.0
Q ss_pred eEEEEEEE-CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh--
Q psy2521 525 QTKQVYFR-SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE-- 601 (783)
Q Consensus 525 ~~~~~~~~-s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~-- 601 (783)
..+++.+. ..+|..+++.++.|++.. +++.|+||++||+.+....+........++++.|++|+++|+||.|....
T Consensus 14 ~~~~~~~~s~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~ 92 (278)
T 3e4d_A 14 MQGVFSHQSETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDE 92 (278)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred cEEEEEEeccccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCcccccc
Confidence 45555554 467899999999998754 57899999999987665432111113455666699999999998553321
Q ss_pred --hH--------Hhhcccc--CCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 602 --DW--------HNAGRLL--KKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 602 --~~--------~~~g~~~--~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
.| +...... .....+.+++ +.++++.+...+|++|++|+|+|+||++++.++.++|++|+++++.+
T Consensus 93 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 172 (278)
T 3e4d_A 93 LTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFA 172 (278)
T ss_dssp TTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEES
T ss_pred cccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeC
Confidence 11 1110000 0111234443 35666666645788999999999999999999999999999999999
Q ss_pred CcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH-HHHHHHHHHh
Q psy2521 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQE 746 (783)
Q Consensus 668 ~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~ 746 (783)
|++++..... . ...+...+|.. .+ .+..++|...++.. ...||+||+||+.|..|+... +.+++++|++
T Consensus 173 ~~~~~~~~~~-~-~~~~~~~~~~~--~~---~~~~~~~~~~~~~~---~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 173 PIVAPSSADW-S-EPALEKYLGAD--RA---AWRRYDACSLVEDG---ARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CCSCGGGCTT-T-HHHHHHHHCSC--GG---GGGGGCHHHHHHTT---CCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred CcccccCCcc-c-hhhHHHhcCCc--HH---HHHhcChhhHhhcC---CCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 9988654211 0 00111223432 11 12345555444432 123459999999999998533 7889999998
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
. |.++++.++++++|++.
T Consensus 243 ~-------g~~~~~~~~~g~~H~~~ 260 (278)
T 3e4d_A 243 T-------DIGLTLRMHDRYDHSYY 260 (278)
T ss_dssp S-------SCEEEEEEETTCCSSHH
T ss_pred c-------CCCceEEEeCCCCcCHH
Confidence 8 88999999999999874
|
| >2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.8e-19 Score=187.15 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=153.7
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHc-CCEEEEEecCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRH-FNGIYAIPNIRGGGEL 599 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~ 599 (783)
....++.+.+++.+| ++++.++.|++. .++.|+||++|||.... ....|.. ....|++ .||.|+.+|+||.+++
T Consensus 44 ~~~~~~~~~i~~~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~~~~ 119 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDP-VCRVLAKDGRAVVFSVDYRLAPEH 119 (310)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHH-HHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CcceEEEEEeccCCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHH-HHHHHHHhcCCEEEEeCCCCCCCC
Confidence 456788999999888 899999999863 46789999999975332 2233443 3444554 4999999999997765
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchh
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDM 672 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~ 672 (783)
+. ....+|+.++++||.+.. .+|+++|+|+|+|+||.+++.++.++|+ .++++|+.+|++|+
T Consensus 120 ~~-----------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 120 KF-----------PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp CT-----------THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred CC-----------CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 31 224689999999998864 3678999999999999999999988776 68999999998886
Q ss_pred hhcccccccccchhhhC-CC-CCHHHHHHH-------------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH
Q psy2521 673 LRFNKFTIAYYSESEFG-SP-NNKTHFHNL-------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 737 (783)
Q Consensus 673 ~~~~~~~~~~~~~~~~g-~p-~~~~~~~~~-------------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~ 737 (783)
..... ...+ ..+. .+ ........+ ...+|.....- ...||+||++|++|..+ .++
T Consensus 189 ~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l----~~~~P~lii~G~~D~~~--~~~ 258 (310)
T 2hm7_A 189 DPAHP---PASI-EENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDL----SGLPPAYIATAQYDPLR--DVG 258 (310)
T ss_dssp CTTSC---CHHH-HHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCC----TTCCCEEEEEEEECTTH--HHH
T ss_pred CcccC---Ccch-hhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccc----cCCCCEEEEEecCCCch--HHH
Confidence 51100 0000 0110 00 011111000 12344432221 23456999999999987 678
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 738 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 738 ~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.+++++|++. |.++++.+++++||++..
T Consensus 259 ~~~~~~l~~~-------g~~~~~~~~~g~~H~~~~ 286 (310)
T 2hm7_A 259 KLYAEALNKA-------GVKVEIENFEDLIHGFAQ 286 (310)
T ss_dssp HHHHHHHHHT-------TCCEEEEEEEEEETTGGG
T ss_pred HHHHHHHHHC-------CCCEEEEEeCCCccchhh
Confidence 8999999988 889999999999998753
|
| >2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=188.45 Aligned_cols=224 Identities=17% Similarity=0.084 Sum_probs=154.9
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
..+..+.+.+++.||.++.+.++.|++ .+.++.|+||++||+.+.... |.......|+++||.|+++|+||.|....
T Consensus 64 ~~~~~~~~~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~~~--~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 64 AKVEHRKVTFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAVKEQ--SSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp TTEEEEEEEEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCCTTS--HHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CCceeEEEEEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCcchh--hHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 345788999999999999999999987 335678999999998765432 33334455666799999999999664432
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc--c
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF--T 679 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~--~ 679 (783)
.... ........+|+.+++++|.++..+|++|++++|+|+||.+++.++.++|+ ++++|+.+|+. +...... .
T Consensus 141 ~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~~~~v~~~p~~-~~~~~~~~~~ 215 (367)
T 2hdw_A 141 QPRN---VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKR-VKAVVTSTMYD-MTRVMSKGYN 215 (367)
T ss_dssp SSSS---CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCC-HHHHHHHTTT
T ss_pred cCcc---ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCCC-ccEEEEecccc-ccHHHhhhhc
Confidence 1111 11123457899999999999888888999999999999999999999985 78888888763 2110000 0
Q ss_pred --------------------------------------c-ccc----chhhhC-----CC--------CCHHHHHHHHhc
Q psy2521 680 --------------------------------------I-AYY----SESEFG-----SP--------NNKTHFHNLLSY 703 (783)
Q Consensus 680 --------------------------------------~-~~~----~~~~~g-----~p--------~~~~~~~~~~~~ 703 (783)
. ... ....|. .| ........+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 0 000 000000 00 001122334456
Q ss_pred CcccCCCCCCCCCc-CCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 704 SPLHNIKVPPNNTQ-YPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 704 sp~~~v~~~~~~~~-~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
+|...++. +. .| +|+++|++|. ++.++.+++++ . +.++++.+++++||++
T Consensus 296 ~~~~~~~~----i~~~P-vLii~G~~D~--~~~~~~~~~~~---~-------~~~~~~~~~~g~gH~~ 346 (367)
T 2hdw_A 296 PILTYIKE----ISPRP-ILLIHGERAH--SRYFSETAYAA---A-------AEPKELLIVPGASHVD 346 (367)
T ss_dssp CSCTTGGG----GTTSC-EEEEEETTCT--THHHHHHHHHH---S-------CSSEEEEEETTCCTTH
T ss_pred ChhHhHHh----hcCCc-eEEEecCCCC--CHHHHHHHHHh---C-------CCCeeEEEeCCCCeee
Confidence 66666554 56 66 9999999998 77777777665 4 6689999999999984
|
| >1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-19 Score=189.04 Aligned_cols=224 Identities=16% Similarity=0.093 Sum_probs=153.4
Q ss_pred CCCeEEEEEEECCCCc-EEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGT-RVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~-~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
..+..+++.+++.||. .+++.++.|++. .++.|+||++|||.... ....|......+..+.||.|+.+|+||.++.
T Consensus 47 ~~~~~~~~~i~~~~g~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~ 124 (323)
T 1lzl_A 47 DGVSLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPET 124 (323)
T ss_dssp TTEEEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTS
T ss_pred CCceEEEEEecCCCCCceeEEEEEecCCC--CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCC
Confidence 4568899999999997 899999999752 46789999999986322 2223433333444435999999999997654
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchh
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDM 672 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~ 672 (783)
. .....+|+.++++||.+. -.+|++||+|+|+|+||.+++.++.++|+ .++++|+.+|++|.
T Consensus 125 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (323)
T 1lzl_A 125 T-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDD 193 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCT
T ss_pred C-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCC
Confidence 3 122468999999999874 23688899999999999999999887765 48999999999886
Q ss_pred hhccc----ccccccch--------hhh-CCCCCH-HHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 673 LRFNK----FTIAYYSE--------SEF-GSPNNK-THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 673 ~~~~~----~~~~~~~~--------~~~-g~p~~~-~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
..... +.....|. ..| +.+... .........+|+..... ...||+||+||++|..+ .++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----~~~~P~li~~G~~D~~~--~~~~ 267 (323)
T 1lzl_A 194 RLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDL----TGLPPTYLSTMELDPLR--DEGI 267 (323)
T ss_dssp TCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCC----TTCCCEEEEEETTCTTH--HHHH
T ss_pred CcCchhHHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCccc----CCCChhheEECCcCCch--HHHH
Confidence 53211 00000000 001 111100 00000012234332121 23456999999999987 5889
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+++++|++. |.++++.+++++||++.
T Consensus 268 ~~~~~l~~~-------g~~~~~~~~~g~~H~~~ 293 (323)
T 1lzl_A 268 EYALRLLQA-------GVSVELHSFPGTFHGSA 293 (323)
T ss_dssp HHHHHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred HHHHHHHHc-------CCCEEEEEeCcCccCcc
Confidence 999999998 88999999999999975
|
| >3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=173.37 Aligned_cols=190 Identities=16% Similarity=0.152 Sum_probs=140.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCC--CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY--GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~--~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
..+++++++.|| +++++++.|++ .++.|+||++||++ +......+...+...|+++||.|+++|+||.|.....
T Consensus 5 ~~~~~~~~~~~g-~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 5 TNEDFLIQGPVG-QLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SSSCEEEECSSS-EEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred ccceEEEECCCc-eEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 356788899999 99999998865 34789999999963 2222222223345566667999999999996654422
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 682 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~ 682 (783)
+ .......+|+.+++++|.++ .+.++++++|+|+||.+++.++ ++| .++++|+..|..+...
T Consensus 81 ~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~~~-------- 142 (208)
T 3trd_A 81 Y------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFYEG-------- 142 (208)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTSGG--------
T ss_pred c------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEeccccccCC--------
Confidence 1 22234578999999999887 4458999999999999999999 678 7899998888762111
Q ss_pred cchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 683 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 683 ~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
+++... ...| +|+++|++|..|++.++.++++++.. .+++.+
T Consensus 143 --------------------~~~~~~-------~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~~----------~~~~~~ 184 (208)
T 3trd_A 143 --------------------FASLTQ-------MASP-WLIVQGDQDEVVPFEQVKAFVNQISS----------PVEFVV 184 (208)
T ss_dssp --------------------GTTCCS-------CCSC-EEEEEETTCSSSCHHHHHHHHHHSSS----------CCEEEE
T ss_pred --------------------chhhhh-------cCCC-EEEEECCCCCCCCHHHHHHHHHHccC----------ceEEEE
Confidence 112222 2344 99999999999999998888776543 268999
Q ss_pred eCCCCccCCccc
Q psy2521 763 EQDAGHGQGKAL 774 (783)
Q Consensus 763 ~~~~gHg~~~~~ 774 (783)
++++||.+....
T Consensus 185 ~~~~~H~~~~~~ 196 (208)
T 3trd_A 185 MSGASHFFHGRL 196 (208)
T ss_dssp ETTCCSSCTTCH
T ss_pred eCCCCCcccccH
Confidence 999999987654
|
| >2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.79 E-value=3e-18 Score=175.89 Aligned_cols=190 Identities=15% Similarity=0.121 Sum_probs=144.1
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC--CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL--PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~--~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
+++++++.|| ++.++++.|++ ++.|+||++||..+.... ......+...|+++||.|+++|+||.|.....+
T Consensus 24 ~~~~~~~~~g-~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~~- 97 (249)
T 2i3d_A 24 PEVIFNGPAG-RLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEF- 97 (249)
T ss_dssp CEEEEEETTE-EEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSCC-
T ss_pred eEEEEECCCc-eEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC-
Confidence 3899999999 89999887754 567999999996432211 111123455666679999999999965433221
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
......++|+.+++++|.+++ .++++++++|+|+||.+++.++.++|+ ++++|+..|..++..
T Consensus 98 -----~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~---------- 160 (249)
T 2i3d_A 98 -----DHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD---------- 160 (249)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC----------
T ss_pred -----CCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh----------
Confidence 112334689999999998875 478899999999999999999999998 899999998775321
Q ss_pred hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 685 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 685 ~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
+ ..+.. +..| +|+++|..|..|++.++.++++.+... .+..+++.+++
T Consensus 161 ------------------~---~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 208 (249)
T 2i3d_A 161 ------------------F---SFLAP----CPSS-GLIINGDADKVAPEKDVNGLVEKLKTQ------KGILITHRTLP 208 (249)
T ss_dssp ------------------C---TTCTT----CCSC-EEEEEETTCSSSCHHHHHHHHHHHTTS------TTCCEEEEEET
T ss_pred ------------------h---hhhcc----cCCC-EEEEEcCCCCCCCHHHHHHHHHHHhhc------cCCceeEEEEC
Confidence 0 11222 4555 999999999999999999999998752 15678999999
Q ss_pred CCCccCC
Q psy2521 765 DAGHGQG 771 (783)
Q Consensus 765 ~~gHg~~ 771 (783)
++||.+.
T Consensus 209 g~~H~~~ 215 (249)
T 2i3d_A 209 GANHFFN 215 (249)
T ss_dssp TCCTTCT
T ss_pred CCCcccc
Confidence 9999986
|
| >1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-19 Score=180.67 Aligned_cols=192 Identities=18% Similarity=0.210 Sum_probs=141.6
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh-
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA- 606 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~- 606 (783)
.+++++.||.+++++++.|++ ++.|+||++||..+... .|. .+...|+++||.|+++|+||.|..+..+...
T Consensus 5 ~~~~~~~~g~~l~~~~~~p~~----~~~p~vv~~hG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~ 77 (236)
T 1zi8_A 5 GISIQSYDGHTFGALVGSPAK----APAPVIVIAQDIFGVNA--FMR-ETVSWLVDQGYAAVCPDLYARQAPGTALDPQD 77 (236)
T ss_dssp TCCEECTTSCEECEEEECCSS----CSEEEEEEECCTTBSCH--HHH-HHHHHHHHTTCEEEEECGGGGTSTTCBCCTTC
T ss_pred eEEEecCCCCeEEEEEECCCC----CCCCEEEEEcCCCCCCH--HHH-HHHHHHHhCCcEEEeccccccCCCcccccccc
Confidence 456788899999999998863 67899999999876643 233 3445666679999999999976554311000
Q ss_pred ----------ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc
Q psy2521 607 ----------GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676 (783)
Q Consensus 607 ----------g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~ 676 (783)
..........+|+.+++++|.++..++ ++++++|+|+||.+++.++.++| ++++++..|....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~---- 150 (236)
T 1zi8_A 78 ERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE---- 150 (236)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG----
T ss_pred hhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc----
Confidence 001122334689999999998775444 69999999999999999999988 7888887774321
Q ss_pred cccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC
Q psy2521 677 KFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN 756 (783)
Q Consensus 677 ~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 756 (783)
++...+.. ++.| +|+++|.+|..|++.++.++++.++.. +
T Consensus 151 ---------------------------~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~-------~- 190 (236)
T 1zi8_A 151 ---------------------------KQLNKVPE----VKHP-ALFHMGGQDHFVPAPSRQLITEGFGAN-------P- 190 (236)
T ss_dssp ---------------------------GCGGGGGG----CCSC-EEEEEETTCTTSCHHHHHHHHHHHTTC-------T-
T ss_pred ---------------------------cchhhhhh----cCCC-EEEEecCCCCCCCHHHHHHHHHHHHhC-------C-
Confidence 01111222 3445 999999999999999999999988765 4
Q ss_pred cEEEEEeCCCCccCCcc
Q psy2521 757 PLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 757 ~~~l~~~~~~gHg~~~~ 773 (783)
++++.+++++||++...
T Consensus 191 ~~~~~~~~~~~H~~~~~ 207 (236)
T 1zi8_A 191 LLQVHWYEEAGHSFART 207 (236)
T ss_dssp TEEEEEETTCCTTTTCT
T ss_pred CceEEEECCCCcccccC
Confidence 78999999999988654
|
| >2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.4e-18 Score=184.68 Aligned_cols=215 Identities=17% Similarity=0.180 Sum_probs=148.5
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcC-CEEEEEecCCCCCCCC
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHF-NGIYAIPNIRGGGELG 600 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G 600 (783)
....+.+.+++.+| .|++.++.|++ .++.|+||++|||.... ....|.. +...|+++ ||.|+++|+||.|+..
T Consensus 45 ~~~~~~~~i~~~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~g~~~ 119 (311)
T 2c7b_A 45 IAETRDVHIPVSGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDH-ICRRLSRLSDSVVVSVDYRLAPEYK 119 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTCEEEEECCCCTTTSC
T ss_pred cceEEEEEecCCCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHH-HHHHHHHhcCCEEEEecCCCCCCCC
Confidence 45788999999888 89999999875 24579999999985221 2223333 33445543 9999999999977643
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhh
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDML 673 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~ 673 (783)
.....+|+.++++||.+.. .+|++||+|+|+|+||.+++.++.++|+ .++++|+.+|++|+.
T Consensus 120 -----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 188 (311)
T 2c7b_A 120 -----------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMT 188 (311)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCS
T ss_pred -----------CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCc
Confidence 1224679999999998752 3578899999999999999999987776 589999999998842
Q ss_pred hccccc--------ccc------cch-hhh-CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH
Q psy2521 674 RFNKFT--------IAY------YSE-SEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 737 (783)
Q Consensus 674 ~~~~~~--------~~~------~~~-~~~-g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~ 737 (783)
...... ... .|. ..| +.+.... ....+|+...- ...||+||++|+.|..++ ++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~l-----~~~~P~lii~G~~D~~~~--~~ 257 (311)
T 2c7b_A 189 GVPTASLVEFGVAETTSLPIELMVWFGRQYLKRPEEAY----DFKASPLLADL-----GGLPPALVVTAEYDPLRD--EG 257 (311)
T ss_dssp SCCCHHHHHHHHCTTCSSCHHHHHHHHHHHCSSTTGGG----STTTCGGGSCC-----TTCCCEEEEEETTCTTHH--HH
T ss_pred cccccCCccHHHhccCCCCHHHHHHHHHHhCCCCcccc----CcccCcccccc-----cCCCcceEEEcCCCCchH--HH
Confidence 110000 000 000 011 1111100 01234443311 133459999999999885 66
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 738 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 738 ~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..++++|+.. +.++++++++++||++.
T Consensus 258 ~~~~~~l~~~-------g~~~~~~~~~g~~H~~~ 284 (311)
T 2c7b_A 258 ELYAYKMKAS-------GSRAVAVRFAGMVHGFV 284 (311)
T ss_dssp HHHHHHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred HHHHHHHHHC-------CCCEEEEEeCCCccccc
Confidence 7788899888 88999999999999986
|
| >4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=99.78 E-value=7.5e-19 Score=175.57 Aligned_cols=187 Identities=16% Similarity=0.137 Sum_probs=130.6
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH---
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN--- 628 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~--- 628 (783)
....|+||++||..+... .|.. +...|...|+.|++||.+|.+.|+..+..... .....+++..+.++.+++
T Consensus 19 ~~a~~~Vv~lHG~G~~~~--~~~~-l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~ 93 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGTAA--DIIS-LQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIE 93 (210)
T ss_dssp TTCSEEEEEECCTTCCHH--HHHG-GGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCCHH--HHHH-HHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHH
Confidence 456799999999433221 1211 22334556999999999987766654433221 122334444444444432
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccC
Q psy2521 629 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 708 (783)
Q Consensus 629 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~ 708 (783)
...+|++||+|+|+|+||.+++.++.++|+.|+++|+.+|.+-... .... ... ..
T Consensus 94 ~~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~-----------------~~~~------~~~--~~ 148 (210)
T 4h0c_A 94 AQGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQE-----------------LAIG------NYK--GD 148 (210)
T ss_dssp HTTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSS-----------------CCGG------GCC--BC
T ss_pred HhCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChh-----------------hhhh------hhh--hh
Confidence 2347999999999999999999999999999999999887431100 0000 000 01
Q ss_pred CCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhccC
Q psy2521 709 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKNPM 782 (783)
Q Consensus 709 v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~~~ 782 (783)
. ...| +|++||+.|++||+.++.++++.|++. |.++++++||+.||++...+-+.+.++|
T Consensus 149 ~------~~~P-vl~~hG~~D~~vp~~~~~~~~~~L~~~-------g~~v~~~~ypg~gH~i~~~el~~i~~wL 208 (210)
T 4h0c_A 149 F------KQTP-VFISTGNPDPHVPVSRVQESVTILEDM-------NAAVSQVVYPGRPHTISGDEIQLVNNTI 208 (210)
T ss_dssp C------TTCE-EEEEEEESCTTSCHHHHHHHHHHHHHT-------TCEEEEEEEETCCSSCCHHHHHHHHHTT
T ss_pred c------cCCc-eEEEecCCCCccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCCcCHHHHHHHHHHH
Confidence 1 2334 999999999999999999999999999 9999999999999999877766776665
|
| >1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-18 Score=175.44 Aligned_cols=201 Identities=14% Similarity=0.056 Sum_probs=142.2
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc----HHHHHHHHcC----CEEEEEecCCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS----ISRCMFLRHF----NGIYAIPNIRG 595 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~----~~~~~~l~~~----G~~v~~~~~RG 595 (783)
..+++.+.+. +|..+++.++.|+++...++.|+||++||+.+....+... ......|.++ |++|+.+|+|+
T Consensus 31 ~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~ 110 (268)
T 1jjf_A 31 QVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNA 110 (268)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCC
T ss_pred eEEEEEEeccccCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCC
Confidence 5777777764 6889999999999876567899999999987654332211 1123334433 59999999998
Q ss_pred CCCC-ChhHHhhccccCCcChHHH-HHHHHHHHHHcCCC--CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 596 GGEL-GEDWHNAGRLLKKQNCFDD-FQAAAEYMINKKYT--KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 596 ~g~~-G~~~~~~g~~~~~~~~~~D-~~a~~~~l~~~~~~--d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
.+.. ...|. ...+| +.++++++.++..+ |++|++|+|+|+||++++.++.++|++|+++++.+|..+
T Consensus 111 ~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~ 181 (268)
T 1jjf_A 111 AGPGIADGYE---------NFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPN 181 (268)
T ss_dssp CCTTCSCHHH---------HHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTT
T ss_pred CCccccccHH---------HHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCC
Confidence 5421 11111 11233 33456666654333 889999999999999999999999999999999999776
Q ss_pred hhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCC
Q psy2521 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 751 (783)
Q Consensus 672 ~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 751 (783)
+.. +...++... .. .. ...|++|++||+.|..|+. +.+++++|++.
T Consensus 182 ~~~---------~~~~~~~~~--~~-------------~~----~~~pp~li~~G~~D~~v~~--~~~~~~~l~~~---- 227 (268)
T 1jjf_A 182 TYP---------NERLFPDGG--KA-------------AR----EKLKLLFIACGTNDSLIGF--GQRVHEYCVAN---- 227 (268)
T ss_dssp SCC---------HHHHCTTTT--HH-------------HH----HHCSEEEEEEETTCTTHHH--HHHHHHHHHHT----
T ss_pred CCc---------hhhhcCcch--hh-------------hh----hcCceEEEEecCCCCCccH--HHHHHHHHHHC----
Confidence 432 111122111 00 01 2455699999999999874 67899999988
Q ss_pred CCCCCcEEEEEeCCCCccCC
Q psy2521 752 PYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++.+++++||++.
T Consensus 228 ---g~~~~~~~~~g~~H~~~ 244 (268)
T 1jjf_A 228 ---NINHVYWLIQGGGHDFN 244 (268)
T ss_dssp ---TCCCEEEEETTCCSSHH
T ss_pred ---CCceEEEEcCCCCcCHh
Confidence 88999999999999974
|
| >4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-19 Score=187.83 Aligned_cols=228 Identities=14% Similarity=0.069 Sum_probs=147.7
Q ss_pred eEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--CCCCC---
Q psy2521 525 QTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--RGGGE--- 598 (783)
Q Consensus 525 ~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~--- 598 (783)
..+++.+.+ .+|..+++.++.|++.. +++.|+||++||+.+....+........++++.|++|+++|. ||.+.
T Consensus 21 ~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~ 99 (283)
T 4b6g_A 21 SQQVWAHHAQTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPND 99 (283)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCC
T ss_pred cEEEEEEechhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccccccccc
Confidence 344554444 57899999999999864 678999999999876554321111134566667999999996 44332
Q ss_pred ------CChhHHhhcccc--CCcChHHHH-HH-HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 599 ------LGEDWHNAGRLL--KKQNCFDDF-QA-AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 599 ------~G~~~~~~g~~~--~~~~~~~D~-~a-~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.|..|+...... .....+.++ .. .+.++. +.+.+++|++|+|+|+||++++.++.++|++|+++++.+|
T Consensus 100 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~ 178 (283)
T 4b6g_A 100 DAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIE-KHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSP 178 (283)
T ss_dssp SSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHH-HHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESC
T ss_pred ccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHH-HhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECC
Confidence 222222211110 011122333 22 333443 3344578999999999999999999999999999999999
Q ss_pred cchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH-HHHHHHHHHHhh
Q psy2521 669 ALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-HSYKFIATLQEK 747 (783)
Q Consensus 669 ~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~-~~~~~~~~L~~~ 747 (783)
++++..... . ...+...+|.. .. .+..++|...++.. ...||+||+||+.|..|+.. ++.+++++|++.
T Consensus 179 ~~~~~~~~~-~-~~~~~~~~g~~--~~---~~~~~~~~~~~~~~---~~~~p~li~~G~~D~~~~~~~~~~~~~~~l~~~ 248 (283)
T 4b6g_A 179 ILSPSLVPW-G-EKAFTAYLGKD--RE---KWQQYDANSLIQQG---YKVQGMRIDQGLEDEFLPTQLRTEDFIETCRAA 248 (283)
T ss_dssp CCCGGGSHH-H-HHHHHHHHCSC--GG---GGGGGCHHHHHHHT---CCCSCCEEEEETTCTTHHHHTCHHHHHHHHHHH
T ss_pred ccccccCcc-h-hhhHHhhcCCc--hH---HHHhcCHHHHHHhc---ccCCCEEEEecCCCccCcchhhHHHHHHHHHHc
Confidence 888643210 0 00111223421 11 12344554433321 12335999999999999873 389999999999
Q ss_pred hCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 748 IGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 748 ~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++.++++++|++.
T Consensus 249 -------g~~~~~~~~~g~~H~~~ 265 (283)
T 4b6g_A 249 -------NQPVDVRFHKGYDHSYY 265 (283)
T ss_dssp -------TCCCEEEEETTCCSSHH
T ss_pred -------CCCceEEEeCCCCcCHh
Confidence 88999999999999874
|
| >1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-18 Score=187.14 Aligned_cols=225 Identities=15% Similarity=0.081 Sum_probs=151.1
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC---cCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP---TFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~---~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
.+..+++.+.+.+|..+.+.++.|++. .++.|+||++|||....... .|.. ....|+++||+|+.+|+||+|++
T Consensus 79 ~~~~~~~~~~~~~g~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~la~~g~~vv~~d~r~~gg~ 155 (361)
T 1jkm_A 79 DVETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRR-WCTDLAAAGSVVVMVDFRNAWTA 155 (361)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHH-HHHHHHHTTCEEEEEECCCSEET
T ss_pred CceeeeeeeecCCCCeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhH-HHHHHHhCCCEEEEEecCCCCCC
Confidence 456788889999998999999999863 23789999999986222222 2332 33455557999999999997643
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhc-----CCCceeEEEEcCCcch
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ-----RPELYGAALILVGALD 671 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~-----~p~lf~a~i~~~~~~d 671 (783)
.. .......+.|+.++++|+.+.- ..| +|+|+|+|+||.+++.++.+ .|+.++++|+.+|++|
T Consensus 156 ~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~ 226 (361)
T 1jkm_A 156 EG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 226 (361)
T ss_dssp TE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred CC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCccc
Confidence 21 1223345789999999998751 234 99999999999999999988 8889999999999988
Q ss_pred hhhccc----ccccccchhhhCCC-CCHHHHHHH-H------------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCC
Q psy2521 672 MLRFNK----FTIAYYSESEFGSP-NNKTHFHNL-L------------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 733 (783)
Q Consensus 672 ~~~~~~----~~~~~~~~~~~g~p-~~~~~~~~~-~------------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~ 733 (783)
...... ......+ .++..+ ........+ . ..+|+...... -...||+||++|++|..++
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--l~~l~P~Lii~G~~D~~~~ 303 (361)
T 1jkm_A 227 GGYAWDHERRLTELPSL-VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDE--LRGLPPFVVAVNELDPLRD 303 (361)
T ss_dssp CCTTSCHHHHHHHCTHH-HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHH--HTTCCCEEEEEETTCTTHH
T ss_pred cccccccccccccCcch-hhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhh--HcCCCceEEEEcCcCcchh
Confidence 721000 0000001 011001 111111110 0 12333110000 0123359999999999887
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++.+++++|++. |.++++.+++++||++.
T Consensus 304 --~~~~~~~~l~~~-------g~~~~l~~~~g~~H~~~ 332 (361)
T 1jkm_A 304 --EGIAFARRLARA-------GVDVAARVNIGLVHGAD 332 (361)
T ss_dssp --HHHHHHHHHHHT-------TCCEEEEEETTCCTTHH
T ss_pred --hHHHHHHHHHHc-------CCCEEEEEeCCCccCcc
Confidence 889999999988 88999999999999986
|
| >3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.4e-18 Score=187.93 Aligned_cols=199 Identities=16% Similarity=0.075 Sum_probs=141.9
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHH
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 617 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~ 617 (783)
.+.+.++.|++ .++.|+||++||+.+... . .+..+|+++||.|+++|+||.++....+ .....+
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~~~----~-~~a~~La~~Gy~V~a~D~rG~g~~~~~~--------~~~~~~ 207 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGGLL----E-YRASLLAGHGFATLALAYYNFEDLPNNM--------DNISLE 207 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCSCC----C-HHHHHHHTTTCEEEEEECSSSTTSCSSC--------SCEETH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcchh----H-HHHHHHHhCCCEEEEEccCCCCCCCCCc--------ccCCHH
Confidence 68999999986 467899999999866422 2 2356677789999999999966554322 223478
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-----------ccc------
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-----------FTI------ 680 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-----------~~~------ 680 (783)
|+.++++||.++..++++||+|+|+|+||.+++.++.++|+ ++++|+.+|......... ...
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVA 286 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccC
Confidence 99999999999888889999999999999999999999998 889998888763321100 000
Q ss_pred --c-ccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH-HHHHHHHHhhhCCCCCCCC
Q psy2521 681 --A-YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQEKIGSLPYQKN 756 (783)
Q Consensus 681 --~-~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~~~~~~ 756 (783)
+ ..+...+..+... ...++...+.. ++.| +|++||++|..|++.+. ..+.++|++. +.
T Consensus 287 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~----i~~P-~Lii~G~~D~~vp~~~~~~~~~~~l~~~-------g~ 348 (422)
T 3k2i_A 287 FSGLVDIVDIRNALVGG------YKNPSMIPIEK----AQGP-ILLIVGQDDHNWRSELYAQTVSERLQAH-------GK 348 (422)
T ss_dssp TTSCEECTTCBCCCTTG------GGSTTBCCGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHHHHHT-------TC
T ss_pred cchhHHHHHHHhhhhhc------ccccccccHHH----CCCC-EEEEEeCCCCCCCHHHHHHHHHHHHHhc-------CC
Confidence 0 0000111111111 01111112222 5556 99999999999999866 5788889988 77
Q ss_pred c-EEEEEeCCCCccCC
Q psy2521 757 P-LLLRVEQDAGHGQG 771 (783)
Q Consensus 757 ~-~~l~~~~~~gHg~~ 771 (783)
+ +++.+++++||++.
T Consensus 349 ~~~~l~~~~gagH~~~ 364 (422)
T 3k2i_A 349 EKPQIICYPGTGHYIE 364 (422)
T ss_dssp CCCEEEEETTCCSCCC
T ss_pred CCCEEEEECCCCCEEC
Confidence 7 89999999999983
|
| >3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A | Back alignment and structure |
|---|
Probab=99.77 E-value=3.7e-18 Score=182.68 Aligned_cols=211 Identities=16% Similarity=0.088 Sum_probs=142.0
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
+.....+.+.+ +|..+ +.|++. ....|+||++|||...... ..|......+..+.||+|+++|||+.++.
T Consensus 55 ~~~~~~~~~~~---~g~~~----~~p~~~--~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 125 (322)
T 3k6k_A 55 AEGVELTLTDL---GGVPC----IRQATD--GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPEN 125 (322)
T ss_dssp CTTCEEEEEEE---TTEEE----EEEECT--TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTS
T ss_pred CCCceEEEEEE---CCEeE----EecCCC--CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCC
Confidence 34456666655 66554 466652 2233449999997533222 22333233344345999999999997654
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc----eeEEEEcCCcchhhhc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRF 675 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l----f~a~i~~~~~~d~~~~ 675 (783)
. ....++|+.++++||+++ .+|++||+|+|+|+||.+++.++.+.|+. ++++|+.+|++|+...
T Consensus 126 ~-----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 193 (322)
T 3k6k_A 126 P-----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLS 193 (322)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCC
T ss_pred C-----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccC
Confidence 3 123478999999999987 46899999999999999999999887764 8999999999987532
Q ss_pred ccccccccchhhh-CCC-CCHHHHHHH------------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHH
Q psy2521 676 NKFTIAYYSESEF-GSP-NNKTHFHNL------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 676 ~~~~~~~~~~~~~-g~p-~~~~~~~~~------------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~ 741 (783)
... +.... ..+ ...+....+ ...||+.... ...||+||+||+.|.. ..++.+++
T Consensus 194 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~~~pP~li~~G~~D~~--~~~~~~~~ 261 (322)
T 3k6k_A 194 RWS-----NSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADL-----SGLPEMLIHVGSEEAL--LSDSTTLA 261 (322)
T ss_dssp SHH-----HHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCC-----TTCCCEEEEEESSCTT--HHHHHHHH
T ss_pred ccc-----hhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCcccccc-----cCCCcEEEEECCcCcc--HHHHHHHH
Confidence 110 00000 000 011111110 1235654432 2456799999999976 46889999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 742 ~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++|+++ |.++++++|+++||++.
T Consensus 262 ~~l~~~-------g~~~~l~~~~g~~H~~~ 284 (322)
T 3k6k_A 262 ERAGAA-------GVSVELKIWPDMPHVFQ 284 (322)
T ss_dssp HHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred HHHHHC-------CCCEEEEEECCCccccc
Confidence 999998 89999999999999985
|
| >3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-18 Score=188.57 Aligned_cols=199 Identities=17% Similarity=0.110 Sum_probs=142.1
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHH
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 617 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~ 617 (783)
.+++.++.|++ .++.|+||++||+.+.... .+..+|+++||.|+++|+||.++.+... ....++
T Consensus 160 ~l~~~l~~P~~---~~~~P~Vv~lhG~~~~~~~-----~~a~~La~~Gy~Vla~D~rG~~~~~~~~--------~~~~~~ 223 (446)
T 3hlk_A 160 RVRGTLFLPPE---PGPFPGIVDMFGTGGGLLE-----YRASLLAGKGFAVMALAYYNYEDLPKTM--------ETLHLE 223 (446)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCSSCSCCC-----HHHHHHHTTTCEEEEECCSSSTTSCSCC--------SEEEHH
T ss_pred eEEEEEEeCCC---CCCCCEEEEECCCCcchhh-----HHHHHHHhCCCEEEEeccCCCCCCCcch--------hhCCHH
Confidence 58999999975 4678999999998664322 1356677789999999999976654221 123489
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-----------ccc------
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-----------FTI------ 680 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-----------~~~------ 680 (783)
|+.++++||.++..+|+++|+|+|+|+||.+++.++.++|+ ++++|+.+|......... +..
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVT 302 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccc
Confidence 99999999999988899999999999999999999999998 789898888653321100 000
Q ss_pred ---cccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH-HHHHHHHHhhhCCCCCCCC
Q psy2521 681 ---AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS-YKFIATLQEKIGSLPYQKN 756 (783)
Q Consensus 681 ---~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~~~~~~ 756 (783)
...+...+..+..... .....++.+ ++.| +|+++|+.|..+++.+. ..++++|++. |.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------i~~P-vLii~G~~D~~vp~~~~~~~~~~~l~~~-------g~ 364 (446)
T 3hlk_A 303 KDGYADIVDVLNSPLEGPD---QKSFIPVER-------AEST-FLFLVGQDDHNWKSEFYANEACKRLQAH-------GR 364 (446)
T ss_dssp SSSCEECTTCBCCTTSGGG---GGGBCCGGG-------CCSE-EEEEEETTCCSSCHHHHHHHHHHHHHHT-------TC
T ss_pred cchHHHHHHHHhchhhccc---cccccCHHH-------CCCC-EEEEEeCCCCCcChHHHHHHHHHHHHHc-------CC
Confidence 0001111112211110 011222333 4445 99999999999999655 6888899988 77
Q ss_pred c-EEEEEeCCCCccCC
Q psy2521 757 P-LLLRVEQDAGHGQG 771 (783)
Q Consensus 757 ~-~~l~~~~~~gHg~~ 771 (783)
+ +++.+|+++||++.
T Consensus 365 ~~~~l~~~pgagH~~~ 380 (446)
T 3hlk_A 365 RKPQIICYPETGHYIE 380 (446)
T ss_dssp CCCEEEEETTBCSCCC
T ss_pred CCcEEEEECCCCCeEC
Confidence 7 89999999999984
|
| >2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=99.77 E-value=3.5e-18 Score=171.21 Aligned_cols=193 Identities=16% Similarity=0.134 Sum_probs=142.7
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
.+..+.+.+++ ||.++.++++.|++ +.|+||++||+.+....+.+. .....|+++||.|+++|+|| +|..
T Consensus 9 ~~~~~~~~~~~-~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g---~g~s 78 (223)
T 2o2g_A 9 QPQEYAVSVSV-GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNR-YVAEVLQQAGLATLLIDLLT---QEEE 78 (223)
T ss_dssp CCCEEEEEEEE-TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHH-HHHHHHHHHTCEEEEECSSC---HHHH
T ss_pred CceeeEEEEec-CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchH-HHHHHHHHCCCEEEEEcCCC---cCCC
Confidence 45678888886 99999999998764 579999999987665543332 34455666799999999999 4433
Q ss_pred HHhhccc---cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 603 WHNAGRL---LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 603 ~~~~g~~---~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
....... .......+|+.++++++..+..+|+++++++|+|+||.+++.++.++|+.++++|+..|..++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~----- 153 (223)
T 2o2g_A 79 EIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP----- 153 (223)
T ss_dssp HHHHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT-----
T ss_pred CccchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH-----
Confidence 2221110 11123357889999999988888999999999999999999999999999999999998765321
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
..+.+ +..| +|+++|.+|..++. +. .+.+++. +.+.+
T Consensus 154 ------------------------~~~~~-------~~~P-~l~i~g~~D~~~~~-~~---~~~~~~~-------~~~~~ 190 (223)
T 2o2g_A 154 ------------------------SALPH-------VKAP-TLLIVGGYDLPVIA-MN---EDALEQL-------QTSKR 190 (223)
T ss_dssp ------------------------TTGGG-------CCSC-EEEEEETTCHHHHH-HH---HHHHHHC-------CSSEE
T ss_pred ------------------------HHHhc-------CCCC-EEEEEccccCCCCH-HH---HHHHHhh-------CCCeE
Confidence 01122 3444 99999999998863 32 3444444 56789
Q ss_pred EEEeCCCCccCCcc
Q psy2521 760 LRVEQDAGHGQGKA 773 (783)
Q Consensus 760 l~~~~~~gHg~~~~ 773 (783)
+.+++++||.+..+
T Consensus 191 ~~~~~~~~H~~~~~ 204 (223)
T 2o2g_A 191 LVIIPRASHLFEEP 204 (223)
T ss_dssp EEEETTCCTTCCST
T ss_pred EEEeCCCCcccCCh
Confidence 99999999998664
|
| >2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=4.7e-18 Score=175.65 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=144.7
Q ss_pred EEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC-ccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 529 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV-SVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
..++-.+|..+++.++.|++ ++.|+||++|||... .....|.. +...|+++||.|+++|+||.+++. +
T Consensus 41 ~~i~~~~~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~~~~~~~--~---- 109 (262)
T 2pbl_A 41 LNLSYGEGDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSH-LAVGALSKGWAVAMPSYELCPEVR--I---- 109 (262)
T ss_dssp EEEESSSSTTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGG-GGHHHHHTTEEEEEECCCCTTTSC--H----
T ss_pred cccccCCCCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHH-HHHHHHhCCCEEEEeCCCCCCCCC--h----
Confidence 34444567677888887765 568999999997422 22223433 334555679999999999976532 1
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC------CCceeEEEEcCCcchhhhccccccc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR------PELYGAALILVGALDMLRFNKFTIA 681 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~lf~a~i~~~~~~d~~~~~~~~~~ 681 (783)
....+|+.+++++|..+.. ++++|+|+|+||++++.++.++ |+.++++|+.+|+.|+......
T Consensus 110 -----~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~--- 178 (262)
T 2pbl_A 110 -----SEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRT--- 178 (262)
T ss_dssp -----HHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGS---
T ss_pred -----HHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhh---
Confidence 1236799999999987643 7999999999999999999887 8899999999999886543211
Q ss_pred ccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 682 YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 682 ~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
.+...++. .. +.+...+|...+.. +..| +|+++|++|..|++.++.++++++. . ++.
T Consensus 179 -~~~~~~~~--~~---~~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~-~-----------~~~ 235 (262)
T 2pbl_A 179 -SMNEKFKM--DA---DAAIAESPVEMQNR----YDAK-VTVWVGGAERPAFLDQAIWLVEAWD-A-----------DHV 235 (262)
T ss_dssp -TTHHHHCC--CH---HHHHHTCGGGCCCC----CSCE-EEEEEETTSCHHHHHHHHHHHHHHT-C-----------EEE
T ss_pred -hhhhhhCC--CH---HHHHhcCcccccCC----CCCC-EEEEEeCCCCcccHHHHHHHHHHhC-C-----------eEE
Confidence 11111221 12 23456788877665 5666 9999999999999999999988875 3 789
Q ss_pred EeCCCCccCCc
Q psy2521 762 VEQDAGHGQGK 772 (783)
Q Consensus 762 ~~~~~gHg~~~ 772 (783)
+++++||...-
T Consensus 236 ~~~~~~H~~~~ 246 (262)
T 2pbl_A 236 IAFEKHHFNVI 246 (262)
T ss_dssp EETTCCTTTTT
T ss_pred EeCCCCcchHH
Confidence 99999998754
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.76 E-value=6.8e-16 Score=171.14 Aligned_cols=267 Identities=14% Similarity=0.086 Sum_probs=181.3
Q ss_pred EeCCeEEEEEEcCCC-CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECC
Q psy2521 165 RQENNYFYFHNKGLQ-NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 243 (783)
Q Consensus 165 ~~G~~~yy~~~~~~~-~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~ 243 (783)
..+.++.|.....+. ....|++.+..++..+.|.... ..+..++|||||++|||+...+|. .+|+++|++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~~la~~s~~~~~--~~i~~~d~~ 211 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLA 211 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECTTSS--CEEEEEETT
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCCEEEEEEecCCC--cEEEEEECC
Confidence 347788887765422 2256777665444555555422 126789999999999999876554 689999999
Q ss_pred CCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEE
Q psy2521 244 TGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSE 323 (783)
Q Consensus 244 tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~ 323 (783)
+|+.............++|||||+.|+|+... .....||++++.+... ..+.. .......+.
T Consensus 212 tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~-------------~g~~~i~~~d~~~~~~--~~l~~---~~~~~~~~~ 273 (415)
T 2hqs_A 212 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSK-------------TGSLNLYVMDLASGQI--RQVTD---GRSNNTEPT 273 (415)
T ss_dssp TCCEEEEECCSSCEEEEEECTTSSEEEEEECT-------------TSSCEEEEEETTTCCE--EECCC---CSSCEEEEE
T ss_pred CCcEEEeecCCCcccCEEEcCCCCEEEEEEec-------------CCCceEEEEECCCCCE--EeCcC---CCCcccceE
Confidence 99876544333334689999999999998732 2234799999876532 12222 222456789
Q ss_pred EecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcC
Q psy2521 324 VTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINL 402 (783)
Q Consensus 324 ~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~ 402 (783)
|||||++|++...+. ....||++|+.++. ...+........ ..|+|||+.|++.+..++ ...|+.+|+
T Consensus 274 ~spdg~~l~~~s~~~-g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g-~~~i~~~d~ 342 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQA-GRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNGG-QQHIAKQDL 342 (415)
T ss_dssp ECTTSSEEEEEECTT-SSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTTSSEEEEEEECSS-CEEEEEEET
T ss_pred ECCCCCEEEEEECCC-CCcEEEEEECCCCC---------EEEEecCCCcccCeEECCCCCEEEEEECcCC-ceEEEEEEC
Confidence 999999999887542 34689999998742 122222211122 269999999998776533 567999999
Q ss_pred CCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccc
Q psy2521 403 NNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKY 475 (783)
Q Consensus 403 ~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~ 475 (783)
+++. .+.+.. . ..+....+.++++.|++....++...|+++|+ +|+..+.|+...+.+..+.++|..
T Consensus 343 ~~~~---~~~l~~-~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~-~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 343 ATGG---VQVLSS-T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TTCC---EEECCC-S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEET-TSCCEEECCCSSSEEEEEEECCCC
T ss_pred CCCC---EEEecC-C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEEC-CCCcEEEeeCCCCCCcCCcccccc
Confidence 8765 344433 3 23344455566677888888888889999999 566667787777888888887753
|
| >2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=176.90 Aligned_cols=224 Identities=15% Similarity=0.063 Sum_probs=145.9
Q ss_pred CeEEEEEEEC-CCCcEEEEEEEEecCcC----CCCCccEEEEecCCCCCccCCcCcH--HHHHHHHcCCEEEEEecCCCC
Q psy2521 524 FQTKQVYFRS-KDGTRVPMYIIHRVGAL----RNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 524 ~~~~~~~~~s-~dg~~v~~~~~~p~~~~----~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~ 596 (783)
+..+++++.+ ..|..+++.++.|++.. .+++.|+||++||+.+.... |.. ....++++.|++|+.+|+|++
T Consensus 5 m~~~~~~~~s~~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~ 82 (263)
T 2uz0_A 5 PAVMKIEYYSQVLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHNS--WLKRTNVERLLRGTNLIVVMPNTSNG 82 (263)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECC---------CCBCEEEEECCTTCCTTH--HHHHSCHHHHTTTCCCEEEECCCTTS
T ss_pred ceEeEEEEechhhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHHH--HHhccCHHHHHhcCCeEEEEECCCCC
Confidence 4566777765 46889999999998752 35789999999998765432 332 244556667999999999986
Q ss_pred CCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc
Q psy2521 597 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676 (783)
Q Consensus 597 g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~ 676 (783)
+..... . + ........+|+.+.++.+..+..+|+++++|+|+|+||++++.++. +|++|+++|+.+|..++....
T Consensus 83 ~~~~~~--~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~ 157 (263)
T 2uz0_A 83 WYTDTQ--Y-G-FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFS 157 (263)
T ss_dssp TTSBCT--T-S-CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCC
T ss_pred ccccCC--C-c-ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhcc
Confidence 432100 0 0 0000111234444454443323468899999999999999999998 999999999999998875522
Q ss_pred ccc----ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 677 KFT----IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 677 ~~~----~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
... ....+...++.+... .+..++|...++.. ...+|+|++||+.|..|+ ++.+++++|++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~p~li~~G~~D~~v~--~~~~~~~~l~~~----- 223 (263)
T 2uz0_A 158 PESQNLGSPAYWRGVFGEIRDW----TTSPYSLESLAKKS---DKKTKLWAWCGEQDFLYE--ANNLAVKNLKKL----- 223 (263)
T ss_dssp GGGTTCSCHHHHHHHHCCCSCT----TTSTTSHHHHGGGC---CSCSEEEEEEETTSTTHH--HHHHHHHHHHHT-----
T ss_pred ccccccccchhHHHHcCChhhh----ccccCCHHHHHHhc---cCCCeEEEEeCCCchhhH--HHHHHHHHHHHC-----
Confidence 100 000111223433221 12344555444431 111459999999999873 578899999988
Q ss_pred CCCCcEEEEEeCCCCccCC
Q psy2521 753 YQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++.++++ ||.+.
T Consensus 224 --g~~~~~~~~~g-~H~~~ 239 (263)
T 2uz0_A 224 --GFDVTYSHSAG-THEWY 239 (263)
T ss_dssp --TCEEEEEEESC-CSSHH
T ss_pred --CCCeEEEECCC-CcCHH
Confidence 88999999999 99874
|
| >1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=183.23 Aligned_cols=214 Identities=15% Similarity=0.152 Sum_probs=147.7
Q ss_pred CC-eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHH-cCCEEEEEecCCCCCCC
Q psy2521 523 LF-QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLR-HFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 523 ~~-~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~ 599 (783)
.+ .++.+.+++.|| .+++.++ +. .++.|+||++|||...... ..|.. +...|+ +.|+.|+.+|+||.|+.
T Consensus 52 ~~~~~~~~~i~~~~g-~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~Vv~~dyrg~g~~ 124 (311)
T 1jji_A 52 RVERVEDRTIKGRNG-DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDA-LCRRIARLSNSTVVSVDYRLAPEH 124 (311)
T ss_dssp CCSEEEEEEEEETTE-EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTSEEEEEECCCTTTS
T ss_pred CcceEEEEEecCCCC-cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHH-HHHHHHHHhCCEEEEecCCCCCCC
Confidence 44 688899998888 8999888 43 3578999999998632222 22333 344454 56999999999997654
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCCc----eeEEEEcCCcchh
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDM 672 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~l----f~a~i~~~~~~d~ 672 (783)
. .....+|+.++++||.+.. .+|++||+|+|+|+||.+++.++.++|+. ++++|+.+|++|+
T Consensus 125 ~-----------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 193 (311)
T 1jji_A 125 K-----------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNF 193 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCS
T ss_pred C-----------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCC
Confidence 3 1224679999999998752 36788999999999999999999887765 9999999999886
Q ss_pred hhccc----cccccc--------c-hhhh-CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 673 LRFNK----FTIAYY--------S-ESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 673 ~~~~~----~~~~~~--------~-~~~~-g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
..... +..... | ...| +.+... .....+|+.. .. ...||+||++|+.|..+ .++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~--~l---~~~~P~li~~G~~D~l~--~~~~ 262 (311)
T 1jji_A 194 VAPTPSLLEFGEGLWILDQKIMSWFSEQYFSREEDK----FNPLASVIFA--DL---ENLPPALIITAEYDPLR--DEGE 262 (311)
T ss_dssp SSCCHHHHHTSSSCSSCCHHHHHHHHHHHCSSGGGG----GCTTTSGGGS--CC---TTCCCEEEEEEEECTTH--HHHH
T ss_pred CCCCccHHHhcCCCccCCHHHHHHHHHHhCCCCccC----CCcccCcccc--cc---cCCChheEEEcCcCcch--HHHH
Confidence 43210 000000 0 0011 110000 0012345431 11 23467999999999987 4778
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+++++|++. +.+++++++++++|++..
T Consensus 263 ~~~~~l~~~-------g~~~~~~~~~g~~H~~~~ 289 (311)
T 1jji_A 263 VFGQMLRRA-------GVEASIVRYRGVLHGFIN 289 (311)
T ss_dssp HHHHHHHHT-------TCCEEEEEEEEEETTGGG
T ss_pred HHHHHHHHc-------CCCEEEEEECCCCeeccc
Confidence 899999998 889999999999999853
|
| >3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-18 Score=173.69 Aligned_cols=224 Identities=16% Similarity=0.122 Sum_probs=150.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
..+.++++ .||.++.+.++.|++ .+.|+||++||+.+......|. .....|+++||.|+++|+||.|.......
T Consensus 21 ~~~~~~~~-~~g~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~~ 94 (270)
T 3pfb_A 21 GMATITLE-RDGLQLVGTREEPFG----EIYDMAIIFHGFTANRNTSLLR-EIANSLRDENIASVRFDFNGHGDSDGKFE 94 (270)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECSS----SSEEEEEEECCTTCCTTCHHHH-HHHHHHHHTTCEEEEECCTTSTTSSSCGG
T ss_pred cceEEEec-cCCEEEEEEEEcCCC----CCCCEEEEEcCCCCCccccHHH-HHHHHHHhCCcEEEEEccccccCCCCCCC
Confidence 45556555 689999999998764 4589999999987664332233 34455666799999999999665442211
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc--ccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT--IAY 682 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~--~~~ 682 (783)
. ..-....+|+.++++++.++. +.++++|+|+|+||++++.++.++|+.++++|+..|..+........ ...
T Consensus 95 ~----~~~~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~ 168 (270)
T 3pfb_A 95 N----MTVLNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGV 168 (270)
T ss_dssp G----CCHHHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTE
T ss_pred c----cCHHHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhcc
Confidence 1 111234688999999998763 33599999999999999999999999999999999988765321100 000
Q ss_pred cchhh-------h-CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCC
Q psy2521 683 YSESE-------F-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 683 ~~~~~-------~-g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 754 (783)
.+... + ...........+....+...++. +..| +|+++|..|..|++..+.++++.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~--------- 234 (270)
T 3pfb_A 169 TYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQ----FTKP-VCLIHGTDDTVVSPNASKKYDQIYQ--------- 234 (270)
T ss_dssp ECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTT----CCSC-EEEEEETTCSSSCTHHHHHHHHHCS---------
T ss_pred ccCcccccccccccccccchhHhhcccccCHHHHHhh----CCcc-EEEEEcCCCCCCCHHHHHHHHHhCC---------
Confidence 00000 0 00011122333444444444444 5666 9999999999999998887776643
Q ss_pred CCcEEEEEeCCCCccCCccchh
Q psy2521 755 KNPLLLRVEQDAGHGQGKALDI 776 (783)
Q Consensus 755 ~~~~~l~~~~~~gHg~~~~~~~ 776 (783)
..++.+++++||.+......
T Consensus 235 --~~~~~~~~~~gH~~~~~~~~ 254 (270)
T 3pfb_A 235 --NSTLHLIEGADHCFSDSYQK 254 (270)
T ss_dssp --SEEEEEETTCCTTCCTHHHH
T ss_pred --CCeEEEcCCCCcccCccchH
Confidence 35899999999998644333
|
| >3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.75 E-value=7.4e-18 Score=176.69 Aligned_cols=214 Identities=15% Similarity=0.098 Sum_probs=148.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
..+.+.+++ +|.++.++++.|+ +.|+||++||+.+.... |. .+...|+++||.|+++|+||.|+......
T Consensus 5 ~~~~~~~~~-~g~~l~~~~~~p~------~~p~vv~~HG~~~~~~~--~~-~~~~~l~~~g~~v~~~d~~G~g~s~~~~~ 74 (290)
T 3ksr_A 5 KLSSIEIPV-GQDELSGTLLTPT------GMPGVLFVHGWGGSQHH--SL-VRAREAVGLGCICMTFDLRGHEGYASMRQ 74 (290)
T ss_dssp EEEEEEEEE-TTEEEEEEEEEEE------SEEEEEEECCTTCCTTT--TH-HHHHHHHTTTCEEECCCCTTSGGGGGGTT
T ss_pred ceeeEEecC-CCeEEEEEEecCC------CCcEEEEeCCCCCCcCc--HH-HHHHHHHHCCCEEEEeecCCCCCCCCCcc
Confidence 467777876 8899999999886 67999999998775543 33 34456666799999999999665433211
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc----
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI---- 680 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~---- 680 (783)
. .......+|+.+++++|.++..+|+++|+|+|+|+||++++.++.++| .+++++.+|..+.........
T Consensus 75 ~----~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~~ 148 (290)
T 3ksr_A 75 S----VTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSLN 148 (290)
T ss_dssp T----CBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHHH
T ss_pred c----ccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhccccccc
Confidence 1 122344689999999999888888899999999999999999999988 567777777665432111000
Q ss_pred -cccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 681 -AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 681 -~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
...+......+..... .++...+.. +..| +|+++|..|..|++.++.++++.++.. + +++
T Consensus 149 ~~~~~~~~~~~~~~~~~------~~~~~~~~~----~~~P-~lii~G~~D~~v~~~~~~~~~~~~~~~-------~-~~~ 209 (290)
T 3ksr_A 149 ADPDLMDYRRRALAPGD------NLALAACAQ----YKGD-VLLVEAENDVIVPHPVMRNYADAFTNA-------R-SLT 209 (290)
T ss_dssp HSTTHHHHTTSCCCGGG------CHHHHHHHH----CCSE-EEEEEETTCSSSCHHHHHHHHHHTTTS-------S-EEE
T ss_pred CChhhhhhhhhhhhhcc------ccHHHHHHh----cCCC-eEEEEecCCcccChHHHHHHHHHhccC-------C-Cce
Confidence 0000001111111110 011111122 4455 999999999999999999999988765 4 789
Q ss_pred EEEeCCCCccCCcc
Q psy2521 760 LRVEQDAGHGQGKA 773 (783)
Q Consensus 760 l~~~~~~gHg~~~~ 773 (783)
+.+++++||.+...
T Consensus 210 ~~~~~~~gH~~~~~ 223 (290)
T 3ksr_A 210 SRVIAGADHALSVK 223 (290)
T ss_dssp EEEETTCCTTCCSH
T ss_pred EEEcCCCCCCCCcc
Confidence 99999999987543
|
| >2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.1e-18 Score=174.38 Aligned_cols=220 Identities=16% Similarity=0.146 Sum_probs=140.7
Q ss_pred EEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc
Q psy2521 529 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 608 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~ 608 (783)
+.++ .||.++.+.++.|++. .++.|+||++||..+......|.. ....|+++||.|+.+|+||.|........
T Consensus 4 ~~~~-~~g~~l~~~~~~p~~~--~~~~p~vvl~HG~~~~~~~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~~--- 76 (251)
T 2wtm_A 4 MYID-CDGIKLNAYLDMPKNN--PEKCPLCIIIHGFTGHSEERHIVA-VQETLNEIGVATLRADMYGHGKSDGKFED--- 76 (251)
T ss_dssp EEEE-ETTEEEEEEEECCTTC--CSSEEEEEEECCTTCCTTSHHHHH-HHHHHHHTTCEEEEECCTTSTTSSSCGGG---
T ss_pred eEEe-cCCcEEEEEEEccCCC--CCCCCEEEEEcCCCcccccccHHH-HHHHHHHCCCEEEEecCCCCCCCCCcccc---
Confidence 4444 4899999999888652 346799999999876632233433 33455557999999999997654322111
Q ss_pred ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--cccc-----
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--FTIA----- 681 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~--~~~~----- 681 (783)
.......+|+.+++++|.+...+ +++.++|||+||.+++.++.++|++++++|+..|...+..... ...+
T Consensus 77 -~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 153 (251)
T 2wtm_A 77 -HTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDP 153 (251)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBT
T ss_pred -CCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCc
Confidence 11122357888888888665333 4899999999999999999999999999999998754322100 0000
Q ss_pred ---ccchhhh-CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc
Q psy2521 682 ---YYSESEF-GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757 (783)
Q Consensus 682 ---~~~~~~~-g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 757 (783)
......+ +.......+..+..+.+...+.. +++| +|+++|++|..||+..+.++++.+. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~lii~G~~D~~v~~~~~~~~~~~~~-----------~ 217 (251)
T 2wtm_A 154 ENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDK----YTKP-VLIVHGDQDEAVPYEASVAFSKQYK-----------N 217 (251)
T ss_dssp TBCCSEEEETTTEEEETHHHHHHTTCCHHHHHHH----CCSC-EEEEEETTCSSSCHHHHHHHHHHSS-----------S
T ss_pred hhcchHHhhhhccccchHHHHHHHccCHHHHHHh----cCCC-EEEEEeCCCCCcChHHHHHHHHhCC-----------C
Confidence 0000000 00000111222222222222222 4566 9999999999999998887766542 3
Q ss_pred EEEEEeCCCCccCCccch
Q psy2521 758 LLLRVEQDAGHGQGKALD 775 (783)
Q Consensus 758 ~~l~~~~~~gHg~~~~~~ 775 (783)
.++.+++++||.. ....
T Consensus 218 ~~~~~~~~~gH~~-~~~~ 234 (251)
T 2wtm_A 218 CKLVTIPGDTHCY-DHHL 234 (251)
T ss_dssp EEEEEETTCCTTC-TTTH
T ss_pred cEEEEECCCCccc-chhH
Confidence 5788999999998 5443
|
| >2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=164.84 Aligned_cols=190 Identities=15% Similarity=0.107 Sum_probs=140.2
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCC--CccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYG--VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~--~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
..+++.+++.|| ++.+.++.|++.. .++.|+||++||+.. ......+.......|+++||.|+++|+||.|.....
T Consensus 9 ~~~~~~~~~~~g-~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 86 (220)
T 2fuk_A 9 ESAALTLDGPVG-PLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS 86 (220)
T ss_dssp SCEEEEEEETTE-EEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEEeCCCC-eEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC
Confidence 467888999999 8999999887620 145899999999642 222222222345666677999999999996654422
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 682 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~ 682 (783)
+ .......+|+.+++++|.++. +.++++++|+|+||.+++.++.++ .++++|+..|..+...
T Consensus 87 ~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~-------- 148 (220)
T 2fuk_A 87 F------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD-------- 148 (220)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC--------
T ss_pred c------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh--------
Confidence 2 122345789999999998873 677999999999999999999886 7899999988775422
Q ss_pred cchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 683 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 683 ~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
+..+. ...| +|+++|.+|..|++.++.+++++++ ..+++.+
T Consensus 149 -----------------------~~~~~-----~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~----------~~~~~~~ 189 (220)
T 2fuk_A 149 -----------------------FSDVQ-----PPAQ-WLVIQGDADEIVDPQAVYDWLETLE----------QQPTLVR 189 (220)
T ss_dssp -----------------------CTTCC-----CCSS-EEEEEETTCSSSCHHHHHHHHTTCS----------SCCEEEE
T ss_pred -----------------------hhhcc-----cCCc-EEEEECCCCcccCHHHHHHHHHHhC----------cCCcEEE
Confidence 11111 1234 9999999999999998888776653 2468899
Q ss_pred eCCCCccCCcc
Q psy2521 763 EQDAGHGQGKA 773 (783)
Q Consensus 763 ~~~~gHg~~~~ 773 (783)
++++||.+...
T Consensus 190 ~~~~~H~~~~~ 200 (220)
T 2fuk_A 190 MPDTSHFFHRK 200 (220)
T ss_dssp ETTCCTTCTTC
T ss_pred eCCCCceehhh
Confidence 99999998653
|
| >1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.74 E-value=2.2e-17 Score=175.05 Aligned_cols=226 Identities=13% Similarity=0.114 Sum_probs=150.3
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH--HHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS--RCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
.++.+++.|. .|.+|+++ +.|.. ++.|+|+++||+.+......|... ...++++.|++|+++|.++++.|.
T Consensus 8 ~v~~~~~~S~~~~~~i~v~-~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~- 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMGRDIKVQ-FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS- 81 (304)
T ss_dssp CCEEEEEEETTTTEEEEEE-EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC-
T ss_pred eEEEEEEECccCCCceEEE-ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc-
Confidence 3556666665 46778877 44433 578999999998532222223322 335677779999999998765553
Q ss_pred hHHhhcc--ccCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc
Q psy2521 602 DWHNAGR--LLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK 677 (783)
Q Consensus 602 ~~~~~g~--~~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~ 677 (783)
+|..... +......+.+++ +.+.++.++.-+++++++|+|+||||++++.++.++|++|+++++.+|.+++.....
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 161 (304)
T 1sfr_A 82 DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMG 161 (304)
T ss_dssp BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTH
T ss_pred ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccch
Confidence 2211100 000123455553 344444443346788999999999999999999999999999999999887543110
Q ss_pred ---------ccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC--cCCcEEEEecCCCC--------------CC
Q psy2521 678 ---------FTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLTGDHDD--------------RV 732 (783)
Q Consensus 678 ---------~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~--~~P~~Li~~g~~D~--------------~V 732 (783)
......+...||.+... .+...+|+.++.. . +-+|+++.+|+.|+ +|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~----l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~ 233 (304)
T 1sfr_A 162 PTLIGLAMGDAGGYKASDMWGPKEDP----AWQRNDPLLNVGK----LIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGF 233 (304)
T ss_dssp HHHHHHHHHHTTSCCHHHHHCSTTST----HHHHSCTTTTHHH----HHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHH
T ss_pred hhhhhHhhhhccccchHHhcCCcchh----hhHhcCHHHHHHH----hhhcCCeEEEEecCCCCccccccccccchhHHH
Confidence 00000122346665432 2457778765543 2 22459999999998 77
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCccCC
Q psy2521 733 PPLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 733 ~~~~~~~~~~~L~~~~~~~~~~~-~~~~l~~~~~~gHg~~ 771 (783)
++.++.+++++|++. | .++.+.+|++++|.+.
T Consensus 234 ~~~~~~~~~~~L~~~-------G~~~v~~~~~~~g~H~~~ 266 (304)
T 1sfr_A 234 VRTSNIKFQDAYNAG-------GGHNGVFDFPDSGTHSWE 266 (304)
T ss_dssp HHHHHHHHHHHHHHT-------TCCSEEEECCSCCCSSHH
T ss_pred HHHHHHHHHHHHHhC-------CCCceEEEecCCCccCHH
Confidence 889999999999998 8 8999999987899864
|
| >1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-17 Score=174.46 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=149.0
Q ss_pred CeEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH--HHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 524 FQTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 524 ~~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
...+.+++.|. +|.+++++ +.|++ .|+|+++||+........|.. ....++++.|++|+.+|.++++.|.
T Consensus 9 ~~~~~~~~~S~~~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~ 81 (280)
T 1r88_A 9 APYENLMVPSPSMGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYT 81 (280)
T ss_dssp CCCEEEEEEETTTTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTS
T ss_pred CCEEEEEEECcccCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccC
Confidence 34667777775 78999998 67764 289999999853222222322 2346677779999999998765442
Q ss_pred hhHHhhccccCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK- 677 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~- 677 (783)
+|..... ..+.+++ +.+.++.++..+++++++|+|+||||++++.++.++|++|+++++.+|.+++.....
T Consensus 82 -~~~~~~~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 155 (280)
T 1r88_A 82 -NWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTN 155 (280)
T ss_dssp -BCSSCTT-----CBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHH
T ss_pred -CCCCCCC-----CcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccch
Confidence 2211110 1233332 234444443347889999999999999999999999999999999999887543110
Q ss_pred -c-------cccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC--cCCcEEEEe----cCCCCC-------CCcHH
Q psy2521 678 -F-------TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLT----GDHDDR-------VPPLH 736 (783)
Q Consensus 678 -~-------~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~--~~P~~Li~~----g~~D~~-------V~~~~ 736 (783)
. .....+...||.+.. ..+.+.+|+.+++. . +-++++|.| |+.|.+ |++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~----~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~ 227 (280)
T 1r88_A 156 GAIAAGMQQFGGVDTNGMWGAPQL----GRWKWHDPWVHASL----LAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGN 227 (280)
T ss_dssp HHHHHHHHHHHCCCTHHHHCCGGG----STTGGGCTTTTHHH----HHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHH
T ss_pred hhHHHHhhhccccchhhhcCCCch----hhhHhcCHHHHHHh----hhccCCeEEEEeccCCCCCCcccccchhHHHHHH
Confidence 0 000012234555432 12456778766543 2 223599999 999985 68899
Q ss_pred HHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCccCC
Q psy2521 737 SYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 737 ~~~~~~~L~~~~~~~~~~~-~~~~l~~~~~~gHg~~ 771 (783)
+.+++++|++. | .++++.+++++||++.
T Consensus 228 ~~~~~~~L~~~-------g~~~~~~~~~~~g~H~~~ 256 (280)
T 1r88_A 228 SRMFYNQYRSV-------GGHNGHFDFPASGDNGWG 256 (280)
T ss_dssp HHHHHHHHHHT-------TCCSEEEECCSSCCSSHH
T ss_pred HHHHHHHHHHC-------CCcceEEEecCCCCcChh
Confidence 99999999988 8 8999999988999874
|
| >3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.1e-17 Score=174.54 Aligned_cols=225 Identities=16% Similarity=0.120 Sum_probs=149.9
Q ss_pred CCCeEEEE-EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQV-YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~-~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+..+++ ++.+.||.++.+.++.|.+ ++.|+||++||+.+... .|.. ....|+++||.|+++|+||.|...
T Consensus 30 ~~~~~~~~~~~~~~dg~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~g~~vi~~D~~G~G~S~ 102 (342)
T 3hju_A 30 QSIPYQDLPHLVNADGQYLFCRYWKPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSE 102 (342)
T ss_dssp TSCBTTSSCEEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHTTTEEEEEECCTTSTTSC
T ss_pred CCcccccCceEEccCCeEEEEEEeCCCC----CCCcEEEEECCCCcccc--hHHH-HHHHHHhCCCeEEEEcCCCCcCCC
Confidence 34444555 6788999999999988764 56799999999876654 3443 445666679999999999955433
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI 680 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~ 680 (783)
. ............+|+.+++++|..+ .+..+++|+|+|+||++++.++.++|+.++++|+..|..+.........
T Consensus 103 ~---~~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 177 (342)
T 3hju_A 103 G---ERMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTF 177 (342)
T ss_dssp S---STTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHH
T ss_pred C---cCCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHH
Confidence 1 1111122233478999999999876 4567999999999999999999999999999999999765532110000
Q ss_pred c---ccch-------------hhhCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCcCCcEE
Q psy2521 681 A---YYSE-------------SEFGSPNNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATL 722 (783)
Q Consensus 681 ~---~~~~-------------~~~g~p~~~~~~~~~~~~sp~----------------------~~v~~~~~~~~~P~~L 722 (783)
. ..+. ..+- ....+....+. ..|+ ..+.. +.+| +|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-vl 250 (342)
T 3hju_A 178 KVLAAKVLNLVLPNLSLGPIDSSVL-SRNKTEVDIYN-SDPLICRAGLKVCFGIQLLNAVSRVERALPK----LTVP-FL 250 (342)
T ss_dssp HHHHHHHHHHHCTTCBCCCCCGGGS-CSCHHHHHHHH-TCTTCCCSCCBHHHHHHHHHHHHHHHHHGGG----CCSC-EE
T ss_pred HHHHHHHHHHhccccccCccccccc-ccchHHHHHHh-cCcccccccccHHHHHHHHHHHHHHHHHHHh----CCcC-EE
Confidence 0 0000 0000 01111111111 1111 11222 4566 99
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 723 VLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 723 i~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
+++|+.|..|++..+.++++.+.. ...++.+++++||.+....
T Consensus 251 ii~G~~D~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~~~ 293 (342)
T 3hju_A 251 LLQGSADRLCDSKGAYLLMELAKS---------QDKTLKIYEGAYHVLHKEL 293 (342)
T ss_dssp EEEETTCSSSCHHHHHHHHHHCCC---------SSEEEEEETTCCSCGGGSC
T ss_pred EEEeCCCcccChHHHHHHHHHcCC---------CCceEEEECCCCchhhcCC
Confidence 999999999999988888777642 2468999999999976543
|
| >3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.5e-17 Score=174.56 Aligned_cols=216 Identities=15% Similarity=0.152 Sum_probs=143.3
Q ss_pred EEEEEEE---CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 526 TKQVYFR---SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 526 ~~~~~~~---s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
...+.|. +.+|.++.++++.|++. ..+.|+||++||+.+.... |...+...+.++||.|+++|+|+.+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~~~--~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 24 RNAIPYLDDDRNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNGAD--YRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp EEEEEECC---CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCHHH--HHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred CceEEecccCCCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCHHH--HHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 4456666 67889999999999864 2467999999998776532 322334556667999999999975322222
Q ss_pred HHhhcc--------ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcC-Ccchh
Q psy2521 603 WHNAGR--------LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILV-GALDM 672 (783)
Q Consensus 603 ~~~~g~--------~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~-~~~d~ 672 (783)
|+..|. .......++|+.+++++|.++..+|++||+|+|+|+||++++.++.++|+ .++++|+.. |+.++
T Consensus 100 ~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~ 179 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTL 179 (304)
T ss_dssp HTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCC
T ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccccc
Confidence 222111 01123457899999999998877899999999999999999999999995 677777444 76654
Q ss_pred hhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCC-----------------cH
Q psy2521 673 LRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP-----------------PL 735 (783)
Q Consensus 673 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~-----------------~~ 735 (783)
.... ..| .+|..... .+|....+. ...| +|++||+.|..+. ..
T Consensus 180 ~~~~-----~~~--~~~~~~~~--------~~~~~~~~~----~~~p-~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~ 239 (304)
T 3d0k_A 180 PTFE-----HRF--PEGLDGVG--------LTEDHLARL----LAYP-MTILAGDQDIATDDPNLPSEPAALRQGPHRYA 239 (304)
T ss_dssp SSTT-----SBT--TTSSBTTT--------CCHHHHHHH----HHSC-CEEEEETTCCCC--CCSCCSHHHHTTCSSHHH
T ss_pred CCcc-----ccC--ccccCCCC--------CCHHHHHhh----hcCC-EEEEEeCCCCCccccccccChhhhccCccHHH
Confidence 3321 011 12211100 112111111 2344 9999999999752 34
Q ss_pred HHHHHHHHHH----hhhCCCCCCCCc--EEEEEeCCCCccCCc
Q psy2521 736 HSYKFIATLQ----EKIGSLPYQKNP--LLLRVEQDAGHGQGK 772 (783)
Q Consensus 736 ~~~~~~~~L~----~~~~~~~~~~~~--~~l~~~~~~gHg~~~ 772 (783)
++.++++.++ +. |.+ +++.+++++||++..
T Consensus 240 ~~~~~~~~l~~~a~~~-------g~~~~~~~~~~pg~gH~~~~ 275 (304)
T 3d0k_A 240 RARHYYEAGQRAAAQR-------GLPFGWQLQVVPGIGHDGQA 275 (304)
T ss_dssp HHHHHHHHHHHHHHHH-------TCCCCCEEEEETTCCSCHHH
T ss_pred HHHHHHHHHHHHHHhc-------CCCcceEEEEeCCCCCchHH
Confidence 5677777776 55 666 899999999999743
|
| >3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-16 Score=165.09 Aligned_cols=213 Identities=15% Similarity=0.050 Sum_probs=142.3
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH 604 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 604 (783)
.++..+.+.||.++++.++.|++ .++.|+||++||+.... ....|......++++ +|.|+.+|+||+++...
T Consensus 3 ~~~~~~~~~dg~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~-~~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 3 EIKYKVITKDAFALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTE-HYDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp CEEEEEECTTSCEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTT-TEEEEEECCCCTTTSCH---
T ss_pred ceEEEEecCCcEEEEEEEEccCC---CCCCCEEEEEECCcccCCchhhhHHHHHHHHHh-CceEEeeccccCCcccc---
Confidence 34567888999999999998874 35789999999986322 223345456677876 49999999999765431
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc-----
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----- 679 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~----- 679 (783)
....+|+.++++++.+. .+.++++|+|+|+||++++.++.+ +.++++|+.+|+.++.......
T Consensus 76 --------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 76 --------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp --------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred --------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 22468999999999887 667899999999999999999988 7889999999988763211000
Q ss_pred ------ccccchhhh------CCCCCH---HHHHHHHh-------cCc-------c----cCCCCCCCCCcCCcEEEEec
Q psy2521 680 ------IAYYSESEF------GSPNNK---THFHNLLS-------YSP-------L----HNIKVPPNNTQYPATLVLTG 726 (783)
Q Consensus 680 ------~~~~~~~~~------g~p~~~---~~~~~~~~-------~sp-------~----~~v~~~~~~~~~P~~Li~~g 726 (783)
........+ ...... ..+..... +.. + ..++. +. | +|+++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-P-~lii~G 217 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT----LP-P-VFIAHC 217 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTT----CC-C-EEEEEE
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhcc----CC-C-EEEEec
Confidence 000000000 000000 00000000 000 0 00111 34 4 999999
Q ss_pred CCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 727 DHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 727 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
++|..|++.++.++++.+.. ..+.+++++||++....
T Consensus 218 ~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~H~~~~~~ 254 (275)
T 3h04_A 218 NGDYDVPVEESEHIMNHVPH-----------STFERVNKNEHDFDRRP 254 (275)
T ss_dssp TTCSSSCTHHHHHHHTTCSS-----------EEEEEECSSCSCTTSSC
T ss_pred CCCCCCChHHHHHHHHhcCC-----------ceEEEeCCCCCCcccCC
Confidence 99999999998888765432 46899999999986543
|
| >3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.72 E-value=4e-17 Score=180.50 Aligned_cols=217 Identities=15% Similarity=0.159 Sum_probs=148.6
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHH-HHHHcCCEEEEEecCCCCCCCChh
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRC-MFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~-~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
...+++.++. +|.+++++++.+. +++.|+||++||..+.... |..... .++. +||.|+++|+||.|+..
T Consensus 133 ~~~~~~~i~~-~~~~l~~~~~~~~----~~~~p~vv~~HG~~~~~~~--~~~~~~~~~~~-~g~~vi~~D~~G~G~s~-- 202 (405)
T 3fnb_A 133 IPLKSIEVPF-EGELLPGYAIISE----DKAQDTLIVVGGGDTSRED--LFYMLGYSGWE-HDYNVLMVDLPGQGKNP-- 202 (405)
T ss_dssp CCCEEEEEEE-TTEEEEEEEECCS----SSCCCEEEEECCSSCCHHH--HHHHTHHHHHH-TTCEEEEECCTTSTTGG--
T ss_pred CCcEEEEEeE-CCeEEEEEEEcCC----CCCCCEEEEECCCCCCHHH--HHHHHHHHHHh-CCcEEEEEcCCCCcCCC--
Confidence 3456777776 6889999887432 3456999999997554432 212122 3444 69999999999965432
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccc-
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIA- 681 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~- 681 (783)
.. . ........+|+.+++++|...+ ++|+|+|+|+||++++.++.++| .++++|+..|+.|+.........
T Consensus 203 -~~-~-~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~ 274 (405)
T 3fnb_A 203 -NQ-G-LHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFST 274 (405)
T ss_dssp -GG-T-CCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-
T ss_pred -CC-C-CCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhh
Confidence 11 1 1223355789999999987654 68999999999999999999999 88999999999987543210000
Q ss_pred ----cc------------------c-----hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 682 ----YY------------------S-----ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 682 ----~~------------------~-----~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
+. | ...++.......++.+..+++...++. +++| +||++|.+|..|++
T Consensus 275 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vLii~G~~D~~v~~ 349 (405)
T 3fnb_A 275 ALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNK----IDVP-SLFLVGAGEDSELM 349 (405)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGG----CCSC-EEEEEETTSCHHHH
T ss_pred hhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhh----CCCC-EEEEecCCCcCCCh
Confidence 00 0 001222222222333444444433433 5666 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.++.+++++|+.. +.++++.+++++.|+.
T Consensus 350 ~~~~~l~~~l~~~-------~~~~~l~~~~~~~h~g 378 (405)
T 3fnb_A 350 RQSQVLYDNFKQR-------GIDVTLRKFSSESGAD 378 (405)
T ss_dssp HHHHHHHHHHHHT-------TCCEEEEEECTTTTCC
T ss_pred HHHHHHHHHhccC-------CCCceEEEEcCCccch
Confidence 9999999999988 7789999997766653
|
| >1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16 | Back alignment and structure |
|---|
Probab=99.72 E-value=1e-16 Score=165.65 Aligned_cols=188 Identities=16% Similarity=0.063 Sum_probs=140.3
Q ss_pred CCCeEEEEEEECC--CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 522 TLFQTKQVYFRSK--DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 522 ~~~~~~~~~~~s~--dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
..+..+.+.+++. +|.. .+.+++|... ..++.|+||++||..+.... |.. +...|+++||.|+++|+||.|..
T Consensus 21 g~~~~~~~~~~~~~~~~~~-~~~l~~p~~~-~~~~~p~vv~~HG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~g~g~~ 95 (262)
T 1jfr_A 21 GPYATSQTSVSSLVASGFG-GGTIYYPTST-ADGTFGAVVISPGFTAYQSS--IAW-LGPRLASQGFVVFTIDTNTTLDQ 95 (262)
T ss_dssp CSSCEEEEEECTTTCSSSC-CEEEEEESCC-TTCCEEEEEEECCTTCCGGG--TTT-HHHHHHTTTCEEEEECCSSTTCC
T ss_pred CCCCccceEecceeccCCC-ceeEEecCCC-CCCCCCEEEEeCCcCCCchh--HHH-HHHHHHhCCCEEEEeCCCCCCCC
Confidence 3566777777776 4432 5677788752 24678999999998766543 333 34556667999999999996643
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHH----cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~----~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
.. ....|+.+++++|.+ ...++.++++++|+|+||++++.++.++|+ ++++|+..|...
T Consensus 96 ~~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~---- 158 (262)
T 1jfr_A 96 PD------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT---- 158 (262)
T ss_dssp HH------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS----
T ss_pred Cc------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc----
Confidence 31 124688899999987 344677899999999999999999999998 789988776431
Q ss_pred ccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH-HHHHHHHHHhhhCCCCCC
Q psy2521 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 676 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~~~~~~~~~ 754 (783)
...+.. +..| +|+++|++|..|++.+ +.++++.|..
T Consensus 159 ------------------------------~~~~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~~l~~-------- 195 (262)
T 1jfr_A 159 ------------------------------DKTWPE----LRTP-TLVVGADGDTVAPVATHSKPFYESLPG-------- 195 (262)
T ss_dssp ------------------------------CCCCTT----CCSC-EEEEEETTCSSSCTTTTHHHHHHHSCT--------
T ss_pred ------------------------------cccccc----cCCC-EEEEecCccccCCchhhHHHHHHHhhc--------
Confidence 112222 4455 9999999999999998 9999888742
Q ss_pred CCcEEEEEeCCCCccCCccc
Q psy2521 755 KNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 755 ~~~~~l~~~~~~gHg~~~~~ 774 (783)
+.++++.+++++||.+....
T Consensus 196 ~~~~~~~~~~~~~H~~~~~~ 215 (262)
T 1jfr_A 196 SLDKAYLELRGASHFTPNTS 215 (262)
T ss_dssp TSCEEEEEETTCCTTGGGSC
T ss_pred CCCceEEEeCCCCcCCcccc
Confidence 45789999999999986543
|
| >2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=99.72 E-value=9.7e-18 Score=175.10 Aligned_cols=219 Identities=12% Similarity=0.039 Sum_probs=146.0
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCC---EEEEEecCCCCCCCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN---GIYAIPNIRGGGELG 600 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~RG~g~~G 600 (783)
..+.+.+.+. +|..+.+.++.|+++...+++|+|+++||+........+......+.++.| ++|+.+|+|+++.++
T Consensus 17 ~~~~~~~~s~~~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~ 96 (275)
T 2qm0_A 17 NTEQWKMYSKLEGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFS 96 (275)
T ss_dssp TEEEEEEECTTTCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCC
T ss_pred CceEEEEEecCCCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCc
Confidence 4777888886 789999999999998767789999999998531111111110111223357 999999999876554
Q ss_pred hh-H-Hhhccc----------------c-CCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 601 ED-W-HNAGRL----------------L-KKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 601 ~~-~-~~~g~~----------------~-~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
.. + .+.+.. . .+...+.|++ ..+.++.++..+|++|++|+|+|+||++++.++.++|++
T Consensus 97 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~ 176 (275)
T 2qm0_A 97 GEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNA 176 (275)
T ss_dssp HHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGG
T ss_pred ccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchh
Confidence 21 1 111100 0 0112455554 345556555557889999999999999999999999999
Q ss_pred eeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHH
Q psy2521 660 YGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYK 739 (783)
Q Consensus 660 f~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~ 739 (783)
|+++++.+|.+++..... .. ..+.+ +...+ ... ... +++++||+.|..+++.++.+
T Consensus 177 f~~~~~~s~~~~~~~~~~--------~~-----~~~~~--~~~~~----~~~----~~~-~~~l~~G~~D~~~~~~~~~~ 232 (275)
T 2qm0_A 177 FQNYFISSPSIWWNNKSV--------LE-----KEENL--IIELN----NAK----FET-GVFLTVGSLEREHMVVGANE 232 (275)
T ss_dssp CSEEEEESCCTTHHHHGG--------GG-----GTTHH--HHHHH----TCS----SCE-EEEEEEETTSCHHHHHHHHH
T ss_pred hceeEEeCceeeeChHHH--------HH-----HHHHH--Hhhhc----ccC----CCc-eEEEEeCCcccchhhHHHHH
Confidence 999999999875432100 00 00111 11111 111 223 49999999999999999999
Q ss_pred HHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 740 FIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 740 ~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++++|++. +..|.++.+.++++++|+..
T Consensus 233 ~~~~L~~~----~~~g~~~~~~~~~g~~H~~~ 260 (275)
T 2qm0_A 233 LSERLLQV----NHDKLKFKFYEAEGENHASV 260 (275)
T ss_dssp HHHHHHHC----CCTTEEEEEEEETTCCTTTH
T ss_pred HHHHHHhc----ccCCceEEEEECCCCCcccc
Confidence 99999532 11288999999999999753
|
| >3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-17 Score=162.95 Aligned_cols=181 Identities=10% Similarity=-0.007 Sum_probs=127.9
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh--------hccc--cCCcChHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN--------AGRL--LKKQNCFDDFQA 621 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~--------~g~~--~~~~~~~~D~~a 621 (783)
+++.| ||++||..+.... |.. ....|. .|+.|+.+|.++....|..|.. .+.. .......+++.+
T Consensus 14 ~~~~p-vv~lHG~g~~~~~--~~~-~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T 3og9_A 14 KDLAP-LLLLHSTGGDEHQ--LVE-IAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTD 88 (209)
T ss_dssp TTSCC-EEEECCTTCCTTT--THH-HHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCCCCHHH--HHH-HHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHH
Confidence 35678 9999997655433 333 345565 5999999996643222344443 0100 011123456666
Q ss_pred HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHH
Q psy2521 622 AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLL 701 (783)
Q Consensus 622 ~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 701 (783)
.++.+.++..+|++|++|+|+|+||.+++.++.++|+.++++|+.+|......
T Consensus 89 ~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------------- 141 (209)
T 3og9_A 89 EVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF--------------------------- 141 (209)
T ss_dssp HHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC---------------------------
T ss_pred HHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc---------------------------
Confidence 66666666567899999999999999999999999999999999988653110
Q ss_pred hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhcc
Q psy2521 702 SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKNP 781 (783)
Q Consensus 702 ~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~~ 781 (783)
...... ...| +|++||++|+.||+.++.++++.|++. +.++++.+++ +||++.......+.++
T Consensus 142 ----~~~~~~----~~~p-~li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~-~gH~~~~~~~~~~~~~ 204 (209)
T 3og9_A 142 ----EQTVQL----DDKH-VFLSYAPNDMIVPQKNFGDLKGDLEDS-------GCQLEIYESS-LGHQLTQEEVLAAKKW 204 (209)
T ss_dssp ----CCCCCC----TTCE-EEEEECTTCSSSCHHHHHHHHHHHHHT-------TCEEEEEECS-STTSCCHHHHHHHHHH
T ss_pred ----cccccc----cCCC-EEEEcCCCCCccCHHHHHHHHHHHHHc-------CCceEEEEcC-CCCcCCHHHHHHHHHH
Confidence 000111 3444 999999999999999999999999998 8889999998 7999976555555443
|
| >1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32 | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-17 Score=171.73 Aligned_cols=197 Identities=12% Similarity=0.073 Sum_probs=132.6
Q ss_pred CCCccEEEEecCCCCCc---cCCcCcHHHHHHH----HcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVS---VLPTFSISRCMFL----RHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE 624 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l----~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~ 624 (783)
.++.|+||++|||.... ....|.. ....| ++.||.|+++|+|++++.. ....++|+.++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~-~~~~L~~~a~~~g~~vi~~d~r~~~~~~-----------~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQ-LANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNIT 105 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHH-HHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHH-HHHHHhhhhccCCcEEEEeecccCCCCC-----------CCcHHHHHHHHHH
Confidence 45689999999975332 2223433 34555 4579999999999865422 1234789999999
Q ss_pred HHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-----------------CCceeEEEEcCCcchhhhcccccccc-cch-
Q psy2521 625 YMINKKYTKPKYITIMGGSNGGLLVGACLNQR-----------------PELYGAALILVGALDMLRFNKFTIAY-YSE- 685 (783)
Q Consensus 625 ~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-----------------p~lf~a~i~~~~~~d~~~~~~~~~~~-~~~- 685 (783)
+|+++ .++++++|+|+|+||.+++.++.++ |+.++++|+..|+.++.......... .+.
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99887 5778999999999999999999885 78899999999988775432110000 000
Q ss_pred hhhCCCCCHHHHH-HHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 686 SEFGSPNNKTHFH-NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 686 ~~~g~p~~~~~~~-~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
..++.. .+.+. .....+|+..-..+ .+..| +||++|++|..||+.++.+++++|+.. +.++++.+++
T Consensus 184 ~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~P-~lii~G~~D~~vp~~~~~~~~~~l~~~-------~~~~~~~~~~ 251 (273)
T 1vkh_A 184 LAFPDG--IQMYEEEPSRVMPYVKKALS--RFSID-MHLVHSYSDELLTLRQTNCLISCLQDY-------QLSFKLYLDD 251 (273)
T ss_dssp HHCTTC--GGGCCCCHHHHHHHHHHHHH--HHTCE-EEEEEETTCSSCCTHHHHHHHHHHHHT-------TCCEEEEEEC
T ss_pred HHhccc--ccchhhcccccChhhhhccc--ccCCC-EEEEecCCcCCCChHHHHHHHHHHHhc-------CCceEEEEeC
Confidence 111111 00000 00111121100000 02334 999999999999999999999999988 8899999999
Q ss_pred CCCccCCccc
Q psy2521 765 DAGHGQGKAL 774 (783)
Q Consensus 765 ~~gHg~~~~~ 774 (783)
++||.+.-..
T Consensus 252 ~~gH~~~~~~ 261 (273)
T 1vkh_A 252 LGLHNDVYKN 261 (273)
T ss_dssp CCSGGGGGGC
T ss_pred CCcccccccC
Confidence 9999975433
|
| >1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.5e-16 Score=160.79 Aligned_cols=212 Identities=15% Similarity=0.027 Sum_probs=144.0
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc---
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG--- 607 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g--- 607 (783)
+...+| +++.++.|.+ +.|+||++||..+.... |.. ....|+++||.|+++|+||.|.....+....
T Consensus 7 ~~~~~g--~~~~~~~~~~-----~~~~vv~~hG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~ 76 (238)
T 1ufo_A 7 RLTLAG--LSVLARIPEA-----PKALLLALHGLQGSKEH--ILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76 (238)
T ss_dssp EEEETT--EEEEEEEESS-----CCEEEEEECCTTCCHHH--HHH-TSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred ccccCC--EEEEEEecCC-----CccEEEEECCCcccchH--HHH-HHHHHHhCCCEEEEecCCCCccCCCCCCcccccc
Confidence 334466 4555666653 67999999998665432 222 2344556799999999999664432111100
Q ss_pred ----cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc
Q psy2521 608 ----RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY 683 (783)
Q Consensus 608 ----~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~ 683 (783)
.........+|+.++++++.+.+. ++++++|+|+||.+++.++.++|+.+++++...+........
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~------- 146 (238)
T 1ufo_A 77 YVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQ------- 146 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCCCT-------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchhhh-------
Confidence 000112346788889999887654 699999999999999999999999988888776643211000
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC-cCCcEEEEecCCCCCCCcHHHHHHHHHHH-hhhCCCCCCCC-cEEE
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT-QYPATLVLTGDHDDRVPPLHSYKFIATLQ-EKIGSLPYQKN-PLLL 760 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~-~~P~~Li~~g~~D~~V~~~~~~~~~~~L~-~~~~~~~~~~~-~~~l 760 (783)
..+..| +....+..+++...++. + ..| +|+++|++|..|++.++.++++.+. .. |. ++++
T Consensus 147 --~~~~~~---~~~~~~~~~~~~~~~~~----~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 209 (238)
T 1ufo_A 147 --GQVVED---PGVLALYQAPPATRGEA----YGGVP-LLHLHGSRDHIVPLARMEKTLEALRPHY-------PEGRLAR 209 (238)
T ss_dssp --TCCCCC---HHHHHHHHSCGGGCGGG----GTTCC-EEEEEETTCTTTTHHHHHHHHHHHGGGC-------TTCCEEE
T ss_pred --hhccCC---cccchhhcCChhhhhhh----ccCCc-EEEEECCCCCccCcHHHHHHHHHHhhcC-------CCCceEE
Confidence 001122 22445566777666654 4 566 9999999999999999999999998 66 65 7899
Q ss_pred EEeCCCCccCCccchhhhh
Q psy2521 761 RVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 761 ~~~~~~gHg~~~~~~~~~~ 779 (783)
.+++++||.+.......+.
T Consensus 210 ~~~~~~~H~~~~~~~~~~~ 228 (238)
T 1ufo_A 210 FVEEGAGHTLTPLMARVGL 228 (238)
T ss_dssp EEETTCCSSCCHHHHHHHH
T ss_pred EEeCCCCcccHHHHHHHHH
Confidence 9999999998654444443
|
| >3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-16 Score=162.58 Aligned_cols=219 Identities=16% Similarity=0.183 Sum_probs=141.9
Q ss_pred eEEEEEE-ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 525 QTKQVYF-RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 525 ~~~~~~~-~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
..+.+.+ .+.||.++.+....+++ .+.|+||++||+.+....+.+. ....+++++||.|+++|+||.|......
T Consensus 10 ~~~~~~~~~~~~g~~l~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 84 (270)
T 3llc_A 10 ETHAITVGQGSDARSIAALVRAPAQ----DERPTCIWLGGYRSDMTGTKAL-EMDDLAASLGVGAIRFDYSGHGASGGAF 84 (270)
T ss_dssp EEEEEEESSGGGCEEEEEEEECCSS----TTSCEEEEECCTTCCTTSHHHH-HHHHHHHHHTCEEEEECCTTSTTCCSCG
T ss_pred CcceEEEeeccCcceEEEEeccCCC----CCCCeEEEECCCccccccchHH-HHHHHHHhCCCcEEEeccccCCCCCCcc
Confidence 3445555 56799998877655432 2479999999986654332222 3456665679999999999966554322
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc---CC---CceeEEEEcCCcchhhhccc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ---RP---ELYGAALILVGALDMLRFNK 677 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~---~p---~lf~a~i~~~~~~d~~~~~~ 677 (783)
.. ..-....+|+.++++++ ..+++.++|+|+||.+++.++.+ +| +.++++|+..|..++.....
T Consensus 85 ~~----~~~~~~~~d~~~~~~~l------~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~ 154 (270)
T 3llc_A 85 RD----GTISRWLEEALAVLDHF------KPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI 154 (270)
T ss_dssp GG----CCHHHHHHHHHHHHHHH------CCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT
T ss_pred cc----ccHHHHHHHHHHHHHHh------ccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh
Confidence 11 11111234444455544 25799999999999999999999 99 99999999999887654211
Q ss_pred cc-cccc----ch--------hhhC-CC--CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHH
Q psy2521 678 FT-IAYY----SE--------SEFG-SP--NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 678 ~~-~~~~----~~--------~~~g-~p--~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~ 741 (783)
.. .... +. ..|. .+ .....++..........+.. +.+| +|+++|.+|..|++.++.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~v~~~~~~~~~ 229 (270)
T 3llc_A 155 EPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMID----TGCP-VHILQGMADPDVPYQHALKLV 229 (270)
T ss_dssp GGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCC----CCSC-EEEEEETTCSSSCHHHHHHHH
T ss_pred hhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhc----CCCC-EEEEecCCCCCCCHHHHHHHH
Confidence 00 0000 00 0111 11 11233333444444445554 6777 999999999999999888887
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 742 ~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+.+.. ...++.+++++||.+..
T Consensus 230 ~~~~~---------~~~~~~~~~~~gH~~~~ 251 (270)
T 3llc_A 230 EHLPA---------DDVVLTLVRDGDHRLSR 251 (270)
T ss_dssp HTSCS---------SSEEEEEETTCCSSCCS
T ss_pred HhcCC---------CCeeEEEeCCCcccccc
Confidence 76542 25789999999997654
|
| >3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=169.60 Aligned_cols=183 Identities=17% Similarity=0.105 Sum_probs=136.4
Q ss_pred CeEEEEEEEC--CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 524 FQTKQVYFRS--KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 524 ~~~~~~~~~s--~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
+..+...+.. .+|.. .+.+++|.+. .+.|+||++||+.+... .|. .....|+++||.|+++|+||.|+...
T Consensus 67 ~~~~~~~~~~~~~~g~~-~~~~~~p~~~---~~~p~vv~~HG~~~~~~--~~~-~~~~~la~~G~~vv~~d~~g~g~s~~ 139 (306)
T 3vis_A 67 FSVSEERASRFGADGFG-GGTIYYPREN---NTYGAIAISPGYTGTQS--SIA-WLGERIASHGFVVIAIDTNTTLDQPD 139 (306)
T ss_dssp SCEEEEEECTTTCSSSC-CEEEEEESSC---SCEEEEEEECCTTCCHH--HHH-HHHHHHHTTTEEEEEECCSSTTCCHH
T ss_pred ccceeeeeeccccCCCc-ceEEEeeCCC---CCCCEEEEeCCCcCCHH--HHH-HHHHHHHhCCCEEEEecCCCCCCCcc
Confidence 3344444432 55654 4567777763 37899999999766543 232 34566777899999999999654331
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHc------CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINK------KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
. ..+|+.+++++|.+. ..++++|++++|+|+||.+++.++.++|+ ++++|+..|....
T Consensus 140 ~------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~~--- 203 (306)
T 3vis_A 140 S------------RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHLN--- 203 (306)
T ss_dssp H------------HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC---
T ss_pred h------------HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccCc---
Confidence 1 136899999999987 67888999999999999999999999998 7888887774420
Q ss_pred ccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH-HHHHHHHHHHhhhCCCCCC
Q psy2521 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-HSYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 676 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~-~~~~~~~~L~~~~~~~~~~ 754 (783)
..+.. +..| +|+++|++|..|++. ++.+++++++..
T Consensus 204 -------------------------------~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~l~~~------- 240 (306)
T 3vis_A 204 -------------------------------KSWRD----ITVP-TLIIGAEYDTIASVTLHSKPFYNSIPSP------- 240 (306)
T ss_dssp -------------------------------CCCTT----CCSC-EEEEEETTCSSSCTTTTHHHHHHTCCTT-------
T ss_pred -------------------------------ccccc----CCCC-EEEEecCCCcccCcchhHHHHHHHhccC-------
Confidence 11222 3445 999999999999998 699998888765
Q ss_pred CCcEEEEEeCCCCccCCcc
Q psy2521 755 KNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 755 ~~~~~l~~~~~~gHg~~~~ 773 (783)
+ ++++.+++++||++...
T Consensus 241 ~-~~~~~~~~g~gH~~~~~ 258 (306)
T 3vis_A 241 T-DKAYLELDGASHFAPNI 258 (306)
T ss_dssp S-CEEEEEETTCCTTGGGS
T ss_pred C-CceEEEECCCCccchhh
Confidence 4 78999999999998644
|
| >1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-16 Score=163.91 Aligned_cols=214 Identities=12% Similarity=0.046 Sum_probs=137.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCc---C-cHHHHHHHHcC----CEEEEEecCCCC
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT---F-SISRCMFLRHF----NGIYAIPNIRGG 596 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~---~-~~~~~~~l~~~----G~~v~~~~~RG~ 596 (783)
..+.+++.+.+| .++++++.|+++..+++.|+|+++||+.+....+. . .......|.++ |++|+.+|+||+
T Consensus 40 ~~~~~~~~s~~~-~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~ 118 (297)
T 1gkl_A 40 RIVKETYTGING-TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGG 118 (297)
T ss_dssp EEEEEEEEETTE-EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCST
T ss_pred eEEEEEEEcCCC-EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCC
Confidence 678888998886 89999999998766678999999999876543221 1 11223333334 599999999986
Q ss_pred CCCChhHHhhccccCCcChHHHHHHHHHHHHHcC---------CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 597 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK---------YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 597 g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~---------~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
.+.+..|... ..+|++..++...... ..|+++++|+|+||||++++.++.++|++|+++++.+
T Consensus 119 ~~~~~~~~~~--------~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~s 190 (297)
T 1gkl_A 119 NCTAQNFYQE--------FRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLS 190 (297)
T ss_dssp TCCTTTHHHH--------HHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEES
T ss_pred ccchHHHHHH--------HHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEec
Confidence 5544433211 1234443333221110 0377899999999999999999999999999999999
Q ss_pred CcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhh
Q psy2521 668 GALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEK 747 (783)
Q Consensus 668 ~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~ 747 (783)
|...+... + . . ....+..+... ..++. ...+ +++.+|+.|.. +.++.+++++|++.
T Consensus 191 g~~~~~~~-----~--~-~------~~~~~~~~~~~---~~~~~----~~~~-l~~~~G~~D~~--~~~~~~l~~~L~~~ 246 (297)
T 1gkl_A 191 GDYWYGNS-----P--Q-D------KANSIAEAINR---SGLSK----REYF-VFAATGSEDIA--YANMNPQIEAMKAL 246 (297)
T ss_dssp CCCCBSSS-----H--H-H------HHHHHHHHHHH---HTCCT----TSCE-EEEEEETTCTT--HHHHHHHHHHHHTS
T ss_pred cccccCCc-----c--c-h------hhhHHHHHHhh---ccCCc----CcEE-EEEEeCCCccc--chhHHHHHHHHHHc
Confidence 97643210 0 0 0 00111111111 12222 2233 77789999976 46788999999987
Q ss_pred h-C--CCCCCCCcEEEEEeCCCCccCC
Q psy2521 748 I-G--SLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 748 ~-~--~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
. . .....+.++.+.+++++||++.
T Consensus 247 g~~~~~~~~~~~~~~~~~~~g~gH~~~ 273 (297)
T 1gkl_A 247 PHFDYTSDFSKGNFYFLVAPGATHWWG 273 (297)
T ss_dssp TTCCBBSCTTTCCEEEEEETTCCSSHH
T ss_pred CCccccccccCCceEEEECCCCCcCHH
Confidence 1 0 0000015899999999999864
|
| >4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.9e-16 Score=170.47 Aligned_cols=234 Identities=13% Similarity=0.096 Sum_probs=148.1
Q ss_pred CCCCeEEEEEEECCC--C--cEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCc----HHHHHHHH-cCCEEEEE
Q psy2521 521 PTLFQTKQVYFRSKD--G--TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFS----ISRCMFLR-HFNGIYAI 590 (783)
Q Consensus 521 ~~~~~~~~~~~~s~d--g--~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~----~~~~~~l~-~~G~~v~~ 590 (783)
+......++.|.+.| | +.+.++++.|++. .++.|+|++.||..+.. ..+++. ......|+ ++||+|++
T Consensus 38 ~~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~ 115 (377)
T 4ezi_A 38 HYDLQLYKINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVM 115 (377)
T ss_dssp CCCEEEEEEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEE
T ss_pred CCCcEEEEEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEE
Confidence 345678889998876 4 5577999999873 46899999999986421 112211 12233444 67999999
Q ss_pred ecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH-cCCCCCCcEEEEEeChhHHHHHHHHhcCC----C-ceeEEE
Q psy2521 591 PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN-KKYTKPKYITIMGGSNGGLLVGACLNQRP----E-LYGAAL 664 (783)
Q Consensus 591 ~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~-~~~~d~~ri~i~G~S~GG~l~~~~~~~~p----~-lf~a~i 664 (783)
+|+||.|+.+...+...........+.|.+.++..+.+ .+..+++||+++|+|+||+++++++...| + .+.+++
T Consensus 116 ~D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~ 195 (377)
T 4ezi_A 116 PDYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVA 195 (377)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEE
T ss_pred eCCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEE
Confidence 99999776653111100000111234455555544443 45557789999999999999999987654 3 578999
Q ss_pred EcCCcchhhhccccccc------ccc-----------hhhhC------CCC-----------------------------
Q psy2521 665 ILVGALDMLRFNKFTIA------YYS-----------ESEFG------SPN----------------------------- 692 (783)
Q Consensus 665 ~~~~~~d~~~~~~~~~~------~~~-----------~~~~g------~p~----------------------------- 692 (783)
+..+..|+......-.+ ..+ ...|. ++.
T Consensus 196 ~~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 4ezi_A 196 PGSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLI 275 (377)
T ss_dssp EESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGG
T ss_pred ecCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHH
Confidence 99988887543211000 000 00111 000
Q ss_pred -------------CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 693 -------------NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 693 -------------~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
++...+.+.+.+... . .++.| +||+||.+|..||+.++.++++++++. |. ++
T Consensus 276 ~~~~~~~~~~~~~~p~~~~~l~~~~~~~---~---~~~~P-vli~hG~~D~~Vp~~~~~~l~~~l~~~-------G~-v~ 340 (377)
T 4ezi_A 276 FQPKFSNGIISKTDRNTEILKINFNHYD---F---KPTAP-LLLVGTKGDRDVPYAGAEMAYHSFRKY-------SD-FV 340 (377)
T ss_dssp BCHHHHHHHHTTCSTTHHHHHHHHCCCC---S---CCSSC-EEEEECTTCSSSCHHHHHHHHHHHHTT-------CS-CE
T ss_pred hchhhhhhcccccchHHHHHHHHhcccC---C---CCCCC-EEEEecCCCCCCCHHHHHHHHHHHHhc-------CC-EE
Confidence 000001111111111 1 14566 999999999999999999999999988 88 99
Q ss_pred EEEeCC--CCccCC
Q psy2521 760 LRVEQD--AGHGQG 771 (783)
Q Consensus 760 l~~~~~--~gHg~~ 771 (783)
++.|++ .+|+..
T Consensus 341 ~~~~~~~~~~H~~~ 354 (377)
T 4ezi_A 341 WIKSVSDALDHVQA 354 (377)
T ss_dssp EEEESCSSCCTTTT
T ss_pred EEEcCCCCCCccCh
Confidence 999999 999864
|
| >3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.3e-16 Score=169.02 Aligned_cols=201 Identities=12% Similarity=0.086 Sum_probs=134.7
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHH
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFD 617 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~ 617 (783)
++++++.|.+ ++.|+||++|||.... ....|......+..+.||.|+++|+||+++.. + ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~--~---------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH--I---------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC--H---------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC--c---------hHHHH
Confidence 5667777764 4569999999985332 22233333333433459999999999976533 1 12478
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc----eeEEEEcCCcchhhhcccccccccchhhhCCCCC
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 693 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l----f~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~ 693 (783)
|+.+++++|+++ .++++++|+|+|+||.+++.++.++|+. ++++|+.+|++|+......... .. ........
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~~-~~-~~~~~~~~ 224 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDISD-AL-IEQDAVLS 224 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCCH-HH-HHHCSSCC
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHHh-hh-cccCcccC
Confidence 999999999887 7889999999999999999999887776 9999999998876432110000 00 00000001
Q ss_pred HHHHH----HH--------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 694 KTHFH----NL--------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 694 ~~~~~----~~--------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
..... .+ ...+|+...- ...||+||++|++|. +..++.+++++|++. +.++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~-------~~~~~~~ 290 (326)
T 3d7r_A 225 QFGVNEIMKKWANGLPLTDKRISPINGTI-----EGLPPVYMFGGGREM--THPDMKLFEQMMLQH-------HQYIEFY 290 (326)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTTSGGGSCC-----TTCCCEEEEEETTST--THHHHHHHHHHHHHT-------TCCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCCeECcccCCc-----ccCCCEEEEEeCccc--chHHHHHHHHHHHHC-------CCcEEEE
Confidence 11111 01 1123433211 234569999999995 456788899999988 8899999
Q ss_pred EeCCCCccCCc
Q psy2521 762 VEQDAGHGQGK 772 (783)
Q Consensus 762 ~~~~~gHg~~~ 772 (783)
+++++||++..
T Consensus 291 ~~~g~~H~~~~ 301 (326)
T 3d7r_A 291 DYPKMVHDFPI 301 (326)
T ss_dssp EETTCCTTGGG
T ss_pred EeCCCcccccc
Confidence 99999999754
|
| >3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-16 Score=161.32 Aligned_cols=217 Identities=17% Similarity=0.139 Sum_probs=143.6
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++.+.||.++.+.++.|++ .+.|+||++||..+... .|.. +...|.++||.|+++|+||.|..... ....
T Consensus 21 ~~~~~~g~~l~~~~~~~~~----~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~ 90 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSEGE---RMVV 90 (303)
T ss_dssp EEECTTSCEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHHTTEEEEEECCTTSTTSCSS---TTCC
T ss_pred eEecCCCeEEEEEEeccCC----CCCeEEEEECCCCchhh--HHHH-HHHHHHhCCCcEEEeCCCCCCCCCCC---CCCC
Confidence 6778899999999987764 46799999999866554 3443 34556657999999999996544321 1111
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc----------
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT---------- 679 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~---------- 679 (783)
..-....+|+.+.++++..+ .+.+++.++|||+||++++.++.++|+.++++|+..|..+........
T Consensus 91 ~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 168 (303)
T 3pe6_A 91 SDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLN 168 (303)
T ss_dssp SSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHH
Confidence 12233468888999998776 345699999999999999999999999999999999976543211000
Q ss_pred -cccc-----chhhhCCCCCHHHHHHHHhcCcc----------------------cCCCCCCCCCcCCcEEEEecCCCCC
Q psy2521 680 -IAYY-----SESEFGSPNNKTHFHNLLSYSPL----------------------HNIKVPPNNTQYPATLVLTGDHDDR 731 (783)
Q Consensus 680 -~~~~-----~~~~~g~p~~~~~~~~~~~~sp~----------------------~~v~~~~~~~~~P~~Li~~g~~D~~ 731 (783)
.... ....+- .........+.. .+. ..++. +..| +|+++|.+|..
T Consensus 169 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~ 241 (303)
T 3pe6_A 169 SVLPNLSSGPIDSSVL-SRNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALPK----LTVP-FLLLQGSADRL 241 (303)
T ss_dssp TTCCSCCCCCCCGGGT-CSCHHHHHHHHT-CTTSCCSCCCHHHHHHHHHHHHHHHHHGGG----CCSC-EEEEEETTCSS
T ss_pred HhcccccCCccchhhh-hcchhHHHHhcc-CccccccchhhhhHHHHHHHHHHHHHHhhc----CCCC-EEEEeeCCCCC
Confidence 0000 000000 011111111111 111 11222 4566 99999999999
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 732 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 732 V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
|++..+.++++.+.. ....+.+++++||.+....
T Consensus 242 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~~~ 275 (303)
T 3pe6_A 242 CDSKGAYLLMELAKS---------QDKTLKIYEGAYHVLHKEL 275 (303)
T ss_dssp BCHHHHHHHHHHCCC---------SSEEEEEETTCCSCGGGSC
T ss_pred CChHHHHHHHHhccc---------CCceEEEeCCCccceeccc
Confidence 999988888777642 2478999999999976543
|
| >3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.5e-16 Score=173.09 Aligned_cols=214 Identities=12% Similarity=0.046 Sum_probs=145.0
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
....+++.++. +|..++++++.|.+ .++.|+||++||..+.... +.......+.++||.|+++|+||.|+...
T Consensus 165 ~~~~~~v~i~~-~g~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~~~--~~~~~~~~l~~~G~~V~~~D~~G~G~s~~- 237 (415)
T 3mve_A 165 KYIIKQLEIPF-EKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQTD--MWRLFRDHLAKHDIAMLTVDMPSVGYSSK- 237 (415)
T ss_dssp SSEEEEEEEEC-SSSEEEEEEEESCS---SSCEEEEEEECCTTSCGGG--GHHHHHHTTGGGTCEEEEECCTTSGGGTT-
T ss_pred CCCeEEEEEEE-CCEEEEEEEEecCC---CCCCCEEEEECCCCccHHH--HHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 34678888887 88999999999876 4678999999997654322 22223355656799999999999554321
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--c-c
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--F-T 679 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~--~-~ 679 (783)
.. .....-....++++++.....+|++||+|+|+|+||++++.++..+|+.++++|+..|+++...... . .
T Consensus 238 --~~----~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 311 (415)
T 3mve_A 238 --YP----LTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQ 311 (415)
T ss_dssp --SC----CCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTT
T ss_pred --CC----CCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHH
Confidence 11 1111223345678888888778899999999999999999999989999999999999865332110 0 0
Q ss_pred ccc----cchhhhCCC-CCH-HHHHHHHhcCcccC----CCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhC
Q psy2521 680 IAY----YSESEFGSP-NNK-THFHNLLSYSPLHN----IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 749 (783)
Q Consensus 680 ~~~----~~~~~~g~p-~~~-~~~~~~~~~sp~~~----v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 749 (783)
... .+...+|.. ... +....+..+++... ++. +.+| +|+++|++|..||+.++.++++ .
T Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-vLii~G~~D~~vp~~~~~~l~~----~-- 380 (415)
T 3mve_A 312 MPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRK----TKVP-ILAMSLEGDPVSPYSDNQMVAF----F-- 380 (415)
T ss_dssp SCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSC----BSSC-EEEEEETTCSSSCHHHHHHHHH----T--
T ss_pred hHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCC----CCCC-EEEEEeCCCCCCCHHHHHHHHH----h--
Confidence 000 011123332 222 22334455555432 222 6677 9999999999999998887665 3
Q ss_pred CCCCCCCcEEEEEeCC
Q psy2521 750 SLPYQKNPLLLRVEQD 765 (783)
Q Consensus 750 ~~~~~~~~~~l~~~~~ 765 (783)
+.+.+++++++
T Consensus 381 -----~~~~~l~~i~g 391 (415)
T 3mve_A 381 -----STYGKAKKISS 391 (415)
T ss_dssp -----BTTCEEEEECC
T ss_pred -----CCCceEEEecC
Confidence 44568888888
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=4.6e-15 Score=162.04 Aligned_cols=261 Identities=10% Similarity=0.024 Sum_probs=165.2
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccccc-CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~-~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
.++|||||++|||..+.+|. .+||++|+++|+..+.+...... ..+.|||||+.|+|... .
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~--~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~----------------~ 101 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGP--WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD----------------G 101 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSS--CEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET----------------T
T ss_pred CccCCCCCCEEEEEEcCCCC--ceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC----------------C
Confidence 37899999999999986554 68999999999877665433222 26799999999999982 1
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC------------------CCCcEEEEEECCCCC
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN------------------TQGSDLHYFDLHSLP 353 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~------------------~~~~~l~~~dl~~g~ 353 (783)
..|+++++.+.. ...++..+...........+|||+.++...... .....|+++|+.+|.
T Consensus 102 ~~l~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 102 RNLMRVDLATLE--ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TEEEEEETTTCC--EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CeEEEEECCCCc--ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 379999998753 345565544211112234599999987543211 122789999998852
Q ss_pred CCcccCCCCceeeecCccc-eeEEEEe-eCCEEEEEECCCC--CCceEEEEcCCCCCCCCcEEeecCCCC-ceEEEEEEe
Q psy2521 354 DGKISGKFPLKTVIPGMDH-HHEIIAN-NGPELIVKTTKNA--PKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAV 428 (783)
Q Consensus 354 ~~~l~~~~~~~~l~~~~~~-~~~~~s~-dg~~l~~~t~~~~--~~~~L~~~d~~~~~~~~~~~li~~~~~-~~l~~~~~~ 428 (783)
...+...... ....|+| ||++|+|.++... ...+|+.+++++.. .+.+...... ......+++
T Consensus 180 ---------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 180 ---------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---MRKVKTHAEGESCTHEFWVP 247 (388)
T ss_dssp ---------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---CEESCCCCTTEEEEEEEECT
T ss_pred ---------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---eEEeeeCCCCcccccceECC
Confidence 2333332221 2236999 9999999887431 24589999987655 4555544322 233445666
Q ss_pred eCCEEEEEEecCCee--EEEEEECCCCceeeeec-CCC-eEE----EeeeccccccEEEEEEec-----CCCCceEEEEe
Q psy2521 429 ANNKLIVHYIQNVRS--VMDLHDLNTGKRLHSFP-LDL-GQI----THISGRRKYNEVFYGFTS-----FLQPGTIYHCN 495 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~--~l~~~dl~~G~~~~~l~-~~~-g~v----~~~s~~~d~~~l~~~~ss-----~~~P~~vy~~d 495 (783)
+|+.|++....++.. .|+++|+++|+. +.+. .+. ... .+..++||++.+++.... ......+|++|
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 767788877766655 499999987774 3332 221 011 112456888878775532 24467899999
Q ss_pred CCCCcCCCCCCceEEEee
Q psy2521 496 IPENITDQDDFKPTIFRE 513 (783)
Q Consensus 496 ~~~~~~~tg~~~~~~~~~ 513 (783)
+ +++ +.+.+..
T Consensus 327 ~-----~~~--~~~~l~~ 337 (388)
T 3pe7_A 327 M-----KNG--TQHRVAR 337 (388)
T ss_dssp T-----TTT--EEEEEEE
T ss_pred c-----cCC--ceEEecc
Confidence 9 466 5555554
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.68 E-value=4.4e-15 Score=177.29 Aligned_cols=301 Identities=11% Similarity=0.060 Sum_probs=181.7
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC----CceEEE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG----SDWNTL 237 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G----~d~~~i 237 (783)
.++++|. +++.. . . .|++.+..+++.+++++...+..- .....+++|||||++|+|...... +....+
T Consensus 23 ~w~~dg~-~~~~~--~--~--~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 23 RWISDHE-YLYKQ--E--N--NILVFNAEYGNSSVFLENSTFDEF-GHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp EECSSSE-EEEEE--T--T--EEEEEETTTCCEEEEECTTTTTTC-CSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred EECCCCc-EEEEc--C--C--cEEEEECCCCceEEEEechhhhhh-cccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 4556664 44443 2 2 355555556677777775543211 112245899999999999886421 122679
Q ss_pred EEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCe
Q psy2521 238 HIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS 317 (783)
Q Consensus 238 ~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~ 317 (783)
+++|+++|+..+++........++|||||+.|+|++ + ..||++++.++... ++.........
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~--~---------------~~i~~~~~~~~~~~-~lt~~g~~~~~ 156 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW--N---------------NDIYVKIEPNLPSY-RITWTGKEDII 156 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--T---------------TEEEEESSTTSCCE-ECCSCCBTTTE
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE--C---------------CeEEEEECCCCceE-EEcCCCCccce
Confidence 999999998776554333346899999999999997 1 26888887665321 11111111000
Q ss_pred ---------------eEEEEEEecCCcEEEEEEecCCC--------------------------------CcEEEEEECC
Q psy2521 318 ---------------LGLHSEVTDCGRYLLVSTSNNTQ--------------------------------GSDLHYFDLH 350 (783)
Q Consensus 318 ---------------~~~~~~~SpDGk~l~~~~~~~~~--------------------------------~~~l~~~dl~ 350 (783)
....+.|||||++|++...+.+. ...|+++|++
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 01247899999999997643220 0268889987
Q ss_pred C---CCCCcccCCCCceeeecC-----cccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC----CCCcEEeecC
Q psy2521 351 S---LPDGKISGKFPLKTVIPG-----MDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPC----EKNWKTLIPE 416 (783)
Q Consensus 351 ~---g~~~~l~~~~~~~~l~~~-----~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~----~~~~~~li~~ 416 (783)
+ +.. .....+..+ ..... . .|+|||+.+++..++......|+.+|++++. ......++.+
T Consensus 237 ~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~ 310 (740)
T 4a5s_A 237 SLSSVTN------ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEM 310 (740)
T ss_dssp SCCSSSC------CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEE
T ss_pred CCCCCCc------ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeec
Confidence 7 511 012222221 11111 1 5999999888888887777789999988754 1112233323
Q ss_pred CCCce------EEEEEEeeCCEEE-EEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEec-CCCC
Q psy2521 417 DENRT------LDVVAAVANNKLI-VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS-FLQP 488 (783)
Q Consensus 417 ~~~~~------l~~~~~~~g~~l~-~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss-~~~P 488 (783)
..... ....++++|+.|+ +...++|..+|+++++. |+..+.|+.....+..+. .++++.++|..+. ...|
T Consensus 311 ~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~-~~~~~~lT~g~~~v~~~~-~~d~~~i~f~~~~~~~~~ 388 (740)
T 4a5s_A 311 STTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQID-KKDCTFITKGTWEVIGIE-ALTSDYLYYISNEYKGMP 388 (740)
T ss_dssp CSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETT-CSSCEESCCSSSCEEEEE-EECSSEEEEEESCGGGCT
T ss_pred cCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECC-CCceEecccCCEEEEEEE-EEeCCEEEEEEecCCCCC
Confidence 21211 1345667767777 77778899999999995 444567776544443332 2447778876543 0223
Q ss_pred --ceEEEEeC
Q psy2521 489 --GTIYHCNI 496 (783)
Q Consensus 489 --~~vy~~d~ 496 (783)
..+|++++
T Consensus 389 ~~~~ly~v~~ 398 (740)
T 4a5s_A 389 GGRNLYKIQL 398 (740)
T ss_dssp TCBEEEEEET
T ss_pred ceeEEEEEEC
Confidence 46888887
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-14 Score=172.96 Aligned_cols=294 Identities=9% Similarity=0.045 Sum_probs=190.1
Q ss_pred CCcEEeCCeEEEEEE-cCCCCeeEEEEEeCCCCCeEEEeCCCCcCCC------------------CcEEEeeEEECCCCc
Q psy2521 161 SAPQRQENNYFYFHN-KGLQNHSILYVQRNLTGSTEVFLDPNKLSKD------------------GTTALKLYAFSDNGK 221 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~-~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~------------------g~~~l~~~~~SPDG~ 221 (783)
..++++|.++++... +++.....||+.+..+++.+.+++.....++ +...+..++|||||+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 456688999999887 5545567888888767777777765433210 002367899999999
Q ss_pred EEEEEEecCCCceEEEEEEECCCC---ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEE
Q psy2521 222 HFAYCLSKSGSDWNTLHIKDVDTG---KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 298 (783)
Q Consensus 222 ~la~~~~~~G~d~~~i~v~Dl~tg---~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~ 298 (783)
+|+|+.. .+|+++|+++| +....+........++|||||+.|+|.+ + ..|++++
T Consensus 122 ~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~---------------~~i~~~d 178 (741)
T 2ecf_A 122 RLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--G---------------RNLWVID 178 (741)
T ss_dssp EEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--T---------------TEEEEEE
T ss_pred EEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--C---------------CcEEEEe
Confidence 9999875 47999999998 6555443333346899999999999987 1 2688888
Q ss_pred cCCCCCCceeEEecCCCCe------e--------EEEEEEecCCcEEEEEEecCCC------------------------
Q psy2521 299 LGTEQDKDIPVVEFPNGRS------L--------GLHSEVTDCGRYLLVSTSNNTQ------------------------ 340 (783)
Q Consensus 299 lgt~~~~d~~v~~~~~~~~------~--------~~~~~~SpDGk~l~~~~~~~~~------------------------ 340 (783)
+.++.. ..+........ | ...+.|||||++|++.......
T Consensus 179 ~~~g~~--~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 179 LASGRQ--MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp TTTTEE--EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred cCCCCE--EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 876421 11211111100 0 1458999999999998654311
Q ss_pred -----CcEEEEEECCC-CCCCcccCCCCceeeecC--cccee--EEEEeeCCEEEEEEC-CCCCCceEEEEcCCCCCCCC
Q psy2521 341 -----GSDLHYFDLHS-LPDGKISGKFPLKTVIPG--MDHHH--EIIANNGPELIVKTT-KNAPKGKVVTINLNNPCEKN 409 (783)
Q Consensus 341 -----~~~l~~~dl~~-g~~~~l~~~~~~~~l~~~--~~~~~--~~~s~dg~~l~~~t~-~~~~~~~L~~~d~~~~~~~~ 409 (783)
...|+++|+.+ +.. ..+... ..... ..| |||++|++.+. +......|+.+|+.++.
T Consensus 257 g~~~~~~~l~~~d~~~~~~~---------~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~--- 323 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQT---------QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ--- 323 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCC---------EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---
T ss_pred CCCCCeeEEEEEECCCCCce---------EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---
Confidence 13899999877 531 112211 11111 259 99999998764 44556789999998765
Q ss_pred cEEeecCCCCc----eEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEee-eccccccEEEEEEec
Q psy2521 410 WKTLIPEDENR----TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHI-SGRRKYNEVFYGFTS 484 (783)
Q Consensus 410 ~~~li~~~~~~----~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~-s~~~d~~~l~~~~ss 484 (783)
.+.++...... .....++.+ +.+++....++..+|+.+++ +|+ .+.++.....+..+ .++++++.+++..+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~~~-~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~- 399 (741)
T 2ecf_A 324 QRVLAHETSPTWVPLHNSLRFLDD-GSILWSSERTGFQHLYRIDS-KGK-AAALTHGNWSVDELLAVDEKAGLAYFRAG- 399 (741)
T ss_dssp EEEEEEEECSSCCCCCSCCEECTT-SCEEEEECTTSSCEEEEECS-SSC-EEESCCSSSCEEEEEEEETTTTEEEEEEC-
T ss_pred eEEEEEcCCCCcCCcCCceEECCC-CeEEEEecCCCccEEEEEcC-CCC-eeeeeecceEEEeEeEEeCCCCEEEEEEe-
Confidence 44555433211 112334455 45788888888889999998 566 67777654555454 47788888877654
Q ss_pred CCCC--ceEEEEeC
Q psy2521 485 FLQP--GTIYHCNI 496 (783)
Q Consensus 485 ~~~P--~~vy~~d~ 496 (783)
...| ..+|.+++
T Consensus 400 ~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 400 IESARESQIYAVPL 413 (741)
T ss_dssp SSCTTCBEEEEEET
T ss_pred CCCCceEEEEEEEc
Confidence 3333 34666665
|
| >1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21 | Back alignment and structure |
|---|
Probab=99.67 E-value=4.1e-16 Score=184.47 Aligned_cols=227 Identities=14% Similarity=0.109 Sum_probs=149.7
Q ss_pred CCCCCCeEEEEEE-----ECCCCcE--EEEEEEEecCcCCCCCccEEEEe--cCCCCCc---------c-----------
Q psy2521 519 FEPTLFQTKQVYF-----RSKDGTR--VPMYIIHRVGALRNRRNPVIIYG--YGGYGVS---------V----------- 569 (783)
Q Consensus 519 ~~~~~~~~~~~~~-----~s~dg~~--v~~~~~~p~~~~~~~~~P~ll~~--hGg~~~~---------~----------- 569 (783)
++......+.+++ +..||++ |.+.++.|++ .++.|+||.. ||+.+.. .
T Consensus 161 ~~~~~~~~e~~~ve~~v~~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~ 237 (763)
T 1lns_A 161 FDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHE 237 (763)
T ss_dssp SCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEE
T ss_pred cCCccceeeeeEEecCcccCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccc
Confidence 4444445555555 4689999 9999999987 3689999954 4432110 0
Q ss_pred ------------------------CCcCc----HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHH
Q psy2521 570 ------------------------LPTFS----ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQA 621 (783)
Q Consensus 570 ------------------------~~~~~----~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a 621 (783)
...|. .....+++++||+|+.+|+||.|+.+..+. .......+|+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~~-----~~~~~e~~D~~a 312 (763)
T 1lns_A 238 IHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQT-----SGDYQQIYSMTA 312 (763)
T ss_dssp CCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCC-----TTSHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcCC-----CCCHHHHHHHHH
Confidence 01121 122355666799999999999776543221 122245789999
Q ss_pred HHHHHHHc--CC------------CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc------cc
Q psy2521 622 AAEYMINK--KY------------TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT------IA 681 (783)
Q Consensus 622 ~~~~l~~~--~~------------~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~------~~ 681 (783)
+++||..+ ++ .+.+||+++|+||||++++.+|.++|+.++|+|+.+|+.|+..+.... .+
T Consensus 313 ~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g 392 (763)
T 1lns_A 313 VIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGG 392 (763)
T ss_dssp HHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTT
T ss_pred HHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhccc
Confidence 99999842 11 245799999999999999999999999999999999998765422100 00
Q ss_pred -ccc----hhh--h-----------------------------CCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEe
Q psy2521 682 -YYS----ESE--F-----------------------------GSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLT 725 (783)
Q Consensus 682 -~~~----~~~--~-----------------------------g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~ 725 (783)
..| ... + ..+... +.+...+|..++++ +++| +|++|
T Consensus 393 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~w~~~s~~~~l~~----I~~P-vLii~ 464 (763)
T 1lns_A 393 FPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYN---QFWHDRNYLINTDK----VKAD-VLIVH 464 (763)
T ss_dssp CTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCC---HHHHTTBGGGGGGG----CCSE-EEEEE
T ss_pred CCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchh---HHhhccChhhHhhc----CCCC-EEEEE
Confidence 000 000 0 000000 12334566666665 7777 99999
Q ss_pred cCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 726 GDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 726 g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
|.+|..|++.++.+++++|+. +.+..+.+ .++||..
T Consensus 465 G~~D~~vp~~~a~~l~~al~~--------~~~~~l~i-~~~gH~~ 500 (763)
T 1lns_A 465 GLQDWNVTPEQAYNFWKALPE--------GHAKHAFL-HRGAHIY 500 (763)
T ss_dssp ETTCCSSCTHHHHHHHHHSCT--------TCCEEEEE-ESCSSCC
T ss_pred ECCCCCCChHHHHHHHHhhcc--------CCCeEEEE-eCCcccC
Confidence 999999999999999998863 23455555 5789986
|
| >3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728} | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-16 Score=152.10 Aligned_cols=184 Identities=16% Similarity=0.098 Sum_probs=132.2
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH-HHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
++.+++ .||.++++.++.+.+ +.|+||++||+.+.... |... ....|+++||.|+.+|+||.|. .|..
T Consensus 5 ~~~~~~-~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~---s~~~ 73 (207)
T 3bdi_A 5 QEEFID-VNGTRVFQRKMVTDS-----NRRSIALFHGYSFTSMD--WDKADLFNNYSKIGYNVYAPDYPGFGR---SASS 73 (207)
T ss_dssp EEEEEE-ETTEEEEEEEECCTT-----CCEEEEEECCTTCCGGG--GGGGTHHHHHHTTTEEEEEECCTTSTT---SCCC
T ss_pred eeEEEe-eCCcEEEEEEEeccC-----CCCeEEEECCCCCCccc--cchHHHHHHHHhCCCeEEEEcCCcccc---cCcc
Confidence 333443 489999999988764 56899999998766543 3331 4456667799999999999543 3211
Q ss_pred hccccCCcC-hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 606 AGRLLKKQN-CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 606 ~g~~~~~~~-~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
. ...... .++|+.+.+..++++ .+.++++++|+|+||.++..++.++|+.++++|+..|.... . +
T Consensus 74 ~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~---------~ 139 (207)
T 3bdi_A 74 E--KYGIDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S---------L 139 (207)
T ss_dssp T--TTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G---------G
T ss_pred c--CCCCCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c---------h
Confidence 1 111222 678888888887765 35579999999999999999999999999999998886211 0 0
Q ss_pred hhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 685 ESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 685 ~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
.. .+.+ ++.| +|+++|++|..|++..+.++.+.+. +..+.+++
T Consensus 140 ------------~~------~~~~-------~~~p-~l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~ 182 (207)
T 3bdi_A 140 ------------KG------DMKK-------IRQK-TLLVWGSKDHVVPIALSKEYASIIS-----------GSRLEIVE 182 (207)
T ss_dssp ------------HH------HHTT-------CCSC-EEEEEETTCTTTTHHHHHHHHHHST-----------TCEEEEET
T ss_pred ------------hH------HHhh-------ccCC-EEEEEECCCCccchHHHHHHHHhcC-----------CceEEEeC
Confidence 01 1122 3344 9999999999999998887776653 24788999
Q ss_pred CCCccCCc
Q psy2521 765 DAGHGQGK 772 (783)
Q Consensus 765 ~~gHg~~~ 772 (783)
++||.+..
T Consensus 183 ~~~H~~~~ 190 (207)
T 3bdi_A 183 GSGHPVYI 190 (207)
T ss_dssp TCCSCHHH
T ss_pred CCCCCccc
Confidence 99998643
|
| >1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.67 E-value=7.9e-16 Score=155.21 Aligned_cols=186 Identities=15% Similarity=0.094 Sum_probs=128.1
Q ss_pred EEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEec-------------------CCCCCCCChhH
Q psy2521 543 IIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN-------------------IRGGGELGEDW 603 (783)
Q Consensus 543 ~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~-------------------~RG~g~~G~~~ 603 (783)
++.|+. .++.|+||++||..+.... |. .....|+++||.|+++| +||.+..+...
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~~~~~~--~~-~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~ 87 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLGDTGHG--WA-EAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 87 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSSSCHHH--HH-HHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBC
T ss_pred cccCCC---CCCCceEEEEecCCCccch--HH-HHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccc
Confidence 455654 3578999999998765432 32 23345555699999984 44421100000
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY 683 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~ 683 (783)
........+|+.+.++++.+ ..+|+++++++|+|+||.+++.++.++|+.++++|+.+|..+.....
T Consensus 88 -----~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~------- 154 (232)
T 1fj2_A 88 -----ESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF------- 154 (232)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS-------
T ss_pred -----cHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc-------
Confidence 00111224566666777665 45688999999999999999999999999999999999977643211
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc--EEEE
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP--LLLR 761 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~--~~l~ 761 (783)
+. ....+.. +..| +|+++|++|..|++.++.++++.|++. +.+ +++.
T Consensus 155 -------~~------------~~~~~~~----~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~~ 203 (232)
T 1fj2_A 155 -------PQ------------GPIGGAN----RDIS-ILQCHGDCDPLVPLMFGSLTVEKLKTL-------VNPANVTFK 203 (232)
T ss_dssp -------CS------------SCCCSTT----TTCC-EEEEEETTCSSSCHHHHHHHHHHHHHH-------SCGGGEEEE
T ss_pred -------cc------------ccccccc----CCCC-EEEEecCCCccCCHHHHHHHHHHHHHh-------CCCCceEEE
Confidence 00 0011222 4555 999999999999999999999999988 644 9999
Q ss_pred EeCCCCccCCccchhhh
Q psy2521 762 VEQDAGHGQGKALDIEL 778 (783)
Q Consensus 762 ~~~~~gHg~~~~~~~~~ 778 (783)
+++++||.+.....+.+
T Consensus 204 ~~~~~~H~~~~~~~~~i 220 (232)
T 1fj2_A 204 TYEGMMHSSCQQEMMDV 220 (232)
T ss_dssp EETTCCSSCCHHHHHHH
T ss_pred EeCCCCcccCHHHHHHH
Confidence 99999999854333333
|
| >1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-16 Score=163.54 Aligned_cols=223 Identities=13% Similarity=0.073 Sum_probs=145.5
Q ss_pred EEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH--HHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 526 TKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS--RCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 526 ~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
++.+.+.|. .|.++++.+ |++. + |+|+++||+.+......|... ...++.+.|++|+++|.+|++.|..
T Consensus 6 ~~~~~~~s~~~~~~~~v~~--~p~~---~--~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~- 77 (280)
T 1dqz_A 6 VEYLQVPSASMGRDIKVQF--QGGG---P--HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTD- 77 (280)
T ss_dssp EEEEEEEETTTTEEEEEEE--ECCS---S--SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSB-
T ss_pred EEEEEEECcccCceeEEEE--cCCC---C--CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccC-
Confidence 455666654 567777663 4332 1 589999998531112223221 2345666799999999987554431
Q ss_pred HHhhccc--cCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc--
Q psy2521 603 WHNAGRL--LKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-- 676 (783)
Q Consensus 603 ~~~~g~~--~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-- 676 (783)
|...... ......+.+++ +.+.++.++--+++++++|+|+||||++++.++.++|++|+++++.+|.+++....
T Consensus 78 ~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~ 157 (280)
T 1dqz_A 78 WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWP 157 (280)
T ss_dssp CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHH
T ss_pred CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchh
Confidence 2111000 00123455543 34445544334677899999999999999999999999999999999988764310
Q ss_pred ---c----ccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCC--cCCcEEEEecCCCC--------------CCC
Q psy2521 677 ---K----FTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNT--QYPATLVLTGDHDD--------------RVP 733 (783)
Q Consensus 677 ---~----~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~--~~P~~Li~~g~~D~--------------~V~ 733 (783)
. ...+..+...||.|... .+.+.+|+.++.+ . +-+++++.||+.|. .++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~----l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~ 229 (280)
T 1dqz_A 158 TLIGLAMNDSGGYNANSMWGPSSDP----AWKRNDPMVQIPR----LVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLT 229 (280)
T ss_dssp HHHHHHHHHTTSCCHHHHHCSTTSH----HHHHTCTTTTHHH----HHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHH
T ss_pred hhHHHHhhhccCcCHHHhcCCCCch----hhhhcCHHHHHHH----HHhcCCeEEEEeCCCCcccccccccchhhHHHHH
Confidence 0 00011123456766532 3456788765533 2 22459999999997 578
Q ss_pred cHHHHHHHHHHHhhhCCCCCCC-CcEEEEEeCCCCccCC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQK-NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~-~~~~l~~~~~~gHg~~ 771 (783)
+.++.+++++|++. | .++++.++++++|.+.
T Consensus 230 ~~~~~~~~~~L~~~-------g~~~~~~~~~~~g~H~~~ 261 (280)
T 1dqz_A 230 LRTNQTFRDTYAAD-------GGRNGVFNFPPNGTHSWP 261 (280)
T ss_dssp HHHHHHHHHHHHHT-------TCCSEEEECCSCCCSSHH
T ss_pred HHHHHHHHHHHHhC-------CCCceEEEecCCCccChH
Confidence 89999999999998 8 8999999999999863
|
| >4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.1e-16 Score=165.13 Aligned_cols=198 Identities=16% Similarity=0.116 Sum_probs=132.4
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc--CCEEEEEecCC---CCCCCChhHHhhcc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIR---GGGELGEDWHNAGR 608 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~R---G~g~~G~~~~~~g~ 608 (783)
..+++.-.+...|.. +.++.|+||++||..+.... |.. +...|.. .++.++.++-. ...++|..|+....
T Consensus 47 ~~~~~~l~y~~~p~~--~~~~~plVI~LHG~G~~~~~--~~~-~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~ 121 (285)
T 4fhz_A 47 DIMTRKLTFGRRGAA--PGEATSLVVFLHGYGADGAD--LLG-LAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPW 121 (285)
T ss_dssp -CCCCCCCEEEEESC--TTCCSEEEEEECCTTBCHHH--HHT-THHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHH
T ss_pred ccccccceeecCCCC--CCCCCcEEEEEcCCCCCHHH--HHH-HHHHHHHhCCCeEEEecCCCcccccCCCccccccccc
Confidence 344444444445543 46788999999995333221 211 1223332 38899988742 12335667753211
Q ss_pred c--cCC-------cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 609 L--LKK-------QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 609 ~--~~~-------~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
. ... .....++.+.++.++++..+|++||+|+|+|+||.+++.++.++|+.|+++|+.+|.+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~------- 194 (285)
T 4fhz_A 122 LDGSSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA------- 194 (285)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC-------
T ss_pred ccCcccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC-------
Confidence 0 011 112345666677777666789999999999999999999999999999999988774311
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
++... . ..+ .+.| +|++||+.|++||+.++.+++++|+++ |.+++
T Consensus 195 --------------~~~~~---~---~~~-------~~~P-vl~~hG~~D~~Vp~~~~~~~~~~L~~~-------g~~~~ 239 (285)
T 4fhz_A 195 --------------PERLA---E---EAR-------SKPP-VLLVHGDADPVVPFADMSLAGEALAEA-------GFTTY 239 (285)
T ss_dssp --------------HHHHH---H---HCC-------CCCC-EEEEEETTCSSSCTHHHHHHHHHHHHT-------TCCEE
T ss_pred --------------chhhh---h---hhh-------hcCc-ccceeeCCCCCcCHHHHHHHHHHHHHC-------CCCEE
Confidence 01110 0 011 2334 999999999999999999999999999 99999
Q ss_pred EEEeCCCCccCCccchhhh
Q psy2521 760 LRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 760 l~~~~~~gHg~~~~~~~~~ 778 (783)
+++|++.||++...+-..+
T Consensus 240 ~~~y~g~gH~i~~~~l~~~ 258 (285)
T 4fhz_A 240 GHVMKGTGHGIAPDGLSVA 258 (285)
T ss_dssp EEEETTCCSSCCHHHHHHH
T ss_pred EEEECCCCCCCCHHHHHHH
Confidence 9999999999865544433
|
| >3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=7e-16 Score=175.59 Aligned_cols=206 Identities=14% Similarity=0.072 Sum_probs=145.0
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCc---------------------CcHHHHHHHHc
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT---------------------FSISRCMFLRH 583 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~---------------------~~~~~~~~l~~ 583 (783)
..+.+.+++.||++|.+.++.|++ .++.|+||+.||.... ..+. |......+|++
T Consensus 40 ~~~~v~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 115 (560)
T 3iii_A 40 MEKDGTVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKD-NKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVP 115 (560)
T ss_dssp EEEEEEEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTT-CCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGG
T ss_pred EEEEEEEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCC-cccccccccccccccccccccccccccCCCHHHHHh
Confidence 577799999999999999999986 4789999998864332 1111 10111356667
Q ss_pred CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEE
Q psy2521 584 FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAA 663 (783)
Q Consensus 584 ~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~ 663 (783)
+||+|+.+|+||.|+.+..|.. ......+|+.++++||.++.+.+ .||+++|+|+||++++.++.++|+.++|+
T Consensus 116 ~Gy~vv~~D~RG~G~S~G~~~~-----~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~ai 189 (560)
T 3iii_A 116 NDYVVVKVALRGSDKSKGVLSP-----WSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAM 189 (560)
T ss_dssp GTCEEEEEECTTSTTCCSCBCT-----TSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEE
T ss_pred CCCEEEEEcCCCCCCCCCcccc-----CChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEE
Confidence 8999999999998887765532 23456899999999999988887 89999999999999999999999999999
Q ss_pred EEcCCcchhhhccccccc-------ccchh----hhC-CCCCHHHHH----------HHHhcCcccCCCCCCCCCcCCcE
Q psy2521 664 LILVGALDMLRFNKFTIA-------YYSES----EFG-SPNNKTHFH----------NLLSYSPLHNIKVPPNNTQYPAT 721 (783)
Q Consensus 664 i~~~~~~d~~~~~~~~~~-------~~~~~----~~g-~p~~~~~~~----------~~~~~sp~~~v~~~~~~~~~P~~ 721 (783)
|+.+|+.|+.+...+..| ..|.. .|. .+...+..+ +++..++ ++.+ ++.| +
T Consensus 190 v~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~----I~vP-v 262 (560)
T 3iii_A 190 IPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQ----IKTP-L 262 (560)
T ss_dssp EEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGG----CCSC-E
T ss_pred EecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhh----CCCC-E
Confidence 999999998752211111 11211 111 011000111 2233333 2333 6777 9
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHHhh
Q psy2521 722 LVLTGDHDDRVPPLHSYKFIATLQEK 747 (783)
Q Consensus 722 Li~~g~~D~~V~~~~~~~~~~~L~~~ 747 (783)
|+++|..|..+....+.+.+++|+..
T Consensus 263 l~v~Gw~D~~~~~~g~l~~y~~l~~~ 288 (560)
T 3iii_A 263 LTCASWSTQGLHNRGSFEGFKQAASE 288 (560)
T ss_dssp EEEEEGGGTTTTHHHHHHHHHHCCCS
T ss_pred EEeCCcCCCcccchhHHHHHHhcccc
Confidence 99999999877777787777776543
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-14 Score=157.08 Aligned_cols=303 Identities=8% Similarity=-0.021 Sum_probs=185.7
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
+.++++|.+++|.....+ ...||+.+..+++.+.+++.... ....+.|||||++|+|.... ..|+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~------~~~~~~~spdg~~l~~~~~~-----~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGD------NTFGGFLSPDDDALFYVKDG-----RNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCB------CSSSCEECTTSSEEEEEETT-----TEEEEE
T ss_pred ccCCCCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCC------CccceEEcCCCCEEEEEeCC-----CeEEEE
Confidence 678899999999886433 35788888766666666543211 12246799999999998742 479999
Q ss_pred ECCCCccccccc-cccccCeeE--EeeCCCEEEEEEeecCCCCCCCC------cccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 241 DVDTGKDYPEVL-KNVKFPSIS--WTHDHKGFFYNQYCDINGTADGT------ETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 241 Dl~tg~~~~~~~-~~~~~~~~~--WspDg~~l~y~~~~~~~~~~~g~------~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
|+++|+...... ......... ++|||+.++....+......... .........|+++++.++. ...+..
T Consensus 108 d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~ 185 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQ 185 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEE
T ss_pred ECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEEeec
Confidence 999998654322 111111233 48999988876543221000000 0001234689999988763 334444
Q ss_pred cCCCCeeEEEEEEec-CCcEEEEEEecCCC--CcEEEEEECCCCCCCcccCCCCceeeecCcc---ceeEEEEeeCCEEE
Q psy2521 312 FPNGRSLGLHSEVTD-CGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPGMD---HHHEIIANNGPELI 385 (783)
Q Consensus 312 ~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~--~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~---~~~~~~s~dg~~l~ 385 (783)
.. .+...+.||| ||++|++......+ ..+||++|++++. ...+..... .....|+|||++|+
T Consensus 186 ~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---------~~~l~~~~~~~~~~~~~~spdg~~l~ 253 (388)
T 3pe7_A 186 EN---QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN---------MRKVKTHAEGESCTHEFWVPDGSALV 253 (388)
T ss_dssp ES---SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC---------CEESCCCCTTEEEEEEEECTTSSCEE
T ss_pred CC---ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc---------eEEeeeCCCCcccccceECCCCCEEE
Confidence 32 2346789999 99999998764322 3689999997732 222333221 11236999999998
Q ss_pred EEECCCCC-CceEEEEcCCCCCCCCcEEeecCCCCce--E----EEEEEeeCCEEEEEEec------CCeeEEEEEECCC
Q psy2521 386 VKTTKNAP-KGKVVTINLNNPCEKNWKTLIPEDENRT--L----DVVAAVANNKLIVHYIQ------NVRSVMDLHDLNT 452 (783)
Q Consensus 386 ~~t~~~~~-~~~L~~~d~~~~~~~~~~~li~~~~~~~--l----~~~~~~~g~~l~~~~~~------~g~~~l~~~dl~~ 452 (783)
|.++..+. ...|+.+|++++. .+.+.... ... . ...++++|+.|++...+ .+...|+++|+.+
T Consensus 254 ~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~ 329 (388)
T 3pe7_A 254 YVSYLKGSPDRFIYSADPETLE---NRQLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKN 329 (388)
T ss_dssp EEEEETTCCCEEEEEECTTTCC---EEEEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTT
T ss_pred EEecCCCCCcceEEEEecCCCc---eEEEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccC
Confidence 88775433 3469999998876 23333222 110 0 01355666778776543 5667899999966
Q ss_pred CceeeeecCCCe-----------EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 453 GKRLHSFPLDLG-----------QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 453 G~~~~~l~~~~g-----------~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+. +.|+...+ .+..+.+++|++.+++.... .....+|.+|+
T Consensus 330 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l 382 (388)
T 3pe7_A 330 GTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATL 382 (388)
T ss_dssp TEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEEC
T ss_pred Cce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEEC
Confidence 654 55654433 24456778999888876543 45567999998
|
| >3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=158.61 Aligned_cols=192 Identities=15% Similarity=0.119 Sum_probs=133.1
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc-----
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL----- 609 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~----- 609 (783)
++..+...+..|.+ .+.|+||++||..+.... |.. ....|++ ||.|+++|.++....|..|......
T Consensus 14 ~~~~l~~~~~~~~~----~~~p~vv~lHG~g~~~~~--~~~-~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~ 85 (223)
T 3b5e_A 14 TDLAFPYRLLGAGK----ESRECLFLLHGSGVDETT--LVP-LARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQ 85 (223)
T ss_dssp CSSSSCEEEESTTS----SCCCEEEEECCTTBCTTT--THH-HHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECH
T ss_pred cCCCceEEEeCCCC----CCCCEEEEEecCCCCHHH--HHH-HHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccH
Confidence 34445555443332 234999999998665543 433 4455664 9999999988732225555432110
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhC
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFG 689 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g 689 (783)
.......+|+.+.++++.++..+++++++|+|+|+||.+++.++.++|+.++++|+.+|......
T Consensus 86 ~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------- 150 (223)
T 3b5e_A 86 KSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH--------------- 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc---------------
Confidence 01112345666777777665457889999999999999999999999999999999998653210
Q ss_pred CCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 690 SPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 690 ~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
+ + .... ...| +|++||++|..|++.++. +++.|+.. |.++++.+++ +||.
T Consensus 151 -~-------------~--~~~~----~~~P-~li~~G~~D~~v~~~~~~-~~~~l~~~-------g~~~~~~~~~-~gH~ 200 (223)
T 3b5e_A 151 -V-------------P--ATDL----AGIR-TLIIAGAADETYGPFVPA-LVTLLSRH-------GAEVDARIIP-SGHD 200 (223)
T ss_dssp -C-------------C--CCCC----TTCE-EEEEEETTCTTTGGGHHH-HHHHHHHT-------TCEEEEEEES-CCSC
T ss_pred -c-------------c--cccc----cCCC-EEEEeCCCCCcCCHHHHH-HHHHHHHC-------CCceEEEEec-CCCC
Confidence 0 0 1111 3445 999999999999999999 99999988 8889999999 9999
Q ss_pred CCccchhhhh
Q psy2521 770 QGKALDIELK 779 (783)
Q Consensus 770 ~~~~~~~~~~ 779 (783)
+.......+.
T Consensus 201 ~~~~~~~~i~ 210 (223)
T 3b5e_A 201 IGDPDAAIVR 210 (223)
T ss_dssp CCHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 8654443433
|
| >3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=3.8e-16 Score=158.69 Aligned_cols=185 Identities=14% Similarity=0.066 Sum_probs=127.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHc-----CCEEEEEecCCCC------CCCChhHHhh-cccc---CCcChHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-----FNGIYAIPNIRGG------GELGEDWHNA-GRLL---KKQNCFD 617 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-----~G~~v~~~~~RG~------g~~G~~~~~~-g~~~---~~~~~~~ 617 (783)
.+.|+||++||..+.... |.. +...+.. .|+.|++++.++. +..+..|... +... .....++
T Consensus 21 ~~~p~vv~lHG~g~~~~~--~~~-~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQG--LRM-WIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp CCCEEEEEECCTTCCHHH--HHH-HHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCcEEEEEecCCCchhh--HHH-HHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 578999999997655432 322 2233333 3799999997642 3333444431 1111 1112345
Q ss_pred HHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCH
Q psy2521 618 DFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNK 694 (783)
Q Consensus 618 D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~ 694 (783)
++...+..+++. ..+++++++|+|+|+||++++.++.++|+.++++|+.+|..+....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 555555554432 3468899999999999999999999999999999999987753221
Q ss_pred HHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 695 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 695 ~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
.+..+. . .. ...||+|++||++|..|++.++.++++.|++. +.++++.+++++||++....
T Consensus 159 -~~~~~~------~-~~----~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~~~~~~g~~H~~~~~~ 219 (239)
T 3u0v_A 159 -VYQALQ------K-SN----GVLPELFQCHGTADELVLHSWAEETNSMLKSL-------GVTTKFHSFPNVYHELSKTE 219 (239)
T ss_dssp -HHHHHH------H-CC----SCCCCEEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEETTCCSSCCHHH
T ss_pred -HHHHHH------h-hc----cCCCCEEEEeeCCCCccCHHHHHHHHHHHHHc-------CCcEEEEEeCCCCCcCCHHH
Confidence 011111 0 11 35567999999999999999999999999988 88899999999999987544
Q ss_pred hhhh
Q psy2521 775 DIEL 778 (783)
Q Consensus 775 ~~~~ 778 (783)
...+
T Consensus 220 ~~~~ 223 (239)
T 3u0v_A 220 LDIL 223 (239)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
|
| >4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-16 Score=163.54 Aligned_cols=194 Identities=17% Similarity=0.162 Sum_probs=123.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+..+.||++||..+.... |.. +...|+++||.|+++|+||.|........ .......+|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~~~--~~~-la~~La~~Gy~Via~Dl~GhG~S~~~~~~----~~~~~~~~d~~~~~~~l~~~--- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQS--MRF-LAEGFARAGYTVATPRLTGHGTTPAEMAA----STASDWTADIVAAMRWLEER--- 118 (281)
T ss_dssp CSSEEEEEECCTTCCGGG--GHH-HHHHHHHTTCEEEECCCTTSSSCHHHHHT----CCHHHHHHHHHHHHHHHHHH---
T ss_pred CCCceEEEECCCCCCHHH--HHH-HHHHHHHCCCEEEEECCCCCCCCCccccC----CCHHHHHHHHHHHHHHHHhC---
Confidence 455678899996655433 433 44567778999999999995543222111 11122357888888888754
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc----ccc-ccccch------------hhhCCCCCH-
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN----KFT-IAYYSE------------SEFGSPNNK- 694 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~----~~~-~~~~~~------------~~~g~p~~~- 694 (783)
.+++.|+|+|+||.+++.++.++|+.++++|+..|.+.+.... .+. ....+. .++..+..+
T Consensus 119 -~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
T 4fbl_A 119 -CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV 197 (281)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEG
T ss_pred -CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCch
Confidence 3689999999999999999999999999999999876543210 000 000000 001111000
Q ss_pred HHHHHHHhcCc--ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 695 THFHNLLSYSP--LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 695 ~~~~~~~~~sp--~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.....+..... -..++. +++| +||++|++|..|++.++.++++++.. .++++.+++++||...
T Consensus 198 ~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~---------~~~~l~~~~~~gH~~~ 262 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPR----VKCP-ALIIQSREDHVVPPHNGELIYNGIGS---------TEKELLWLENSYHVAT 262 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGG----CCSC-EEEEEESSCSSSCTHHHHHHHHHCCC---------SSEEEEEESSCCSCGG
T ss_pred HHHHHHHHhhhhccccccc----cCCC-EEEEEeCCCCCcCHHHHHHHHHhCCC---------CCcEEEEECCCCCcCc
Confidence 00111110000 011222 5566 99999999999999999988887643 3678999999999864
|
| >4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.4e-15 Score=157.28 Aligned_cols=132 Identities=13% Similarity=0.103 Sum_probs=97.6
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
+..+.+.+++ +|..+.+.++.... .+++.|+||++||..+.... |.. ....|.++||.|+++|+||.|....
T Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~~~~--~~~-~~~~l~~~g~~v~~~d~~G~G~s~~-- 89 (315)
T 4f0j_A 18 YPVHYLDFTS-QGQPLSMAYLDVAP--KKANGRTILLMHGKNFCAGT--WER-TIDVLADAGYRVIAVDQVGFCKSSK-- 89 (315)
T ss_dssp SCCEEEEEEE-TTEEEEEEEEEECC--SSCCSCEEEEECCTTCCGGG--GHH-HHHHHHHTTCEEEEECCTTSTTSCC--
T ss_pred ccceeEEEec-CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCcchH--HHH-HHHHHHHCCCeEEEeecCCCCCCCC--
Confidence 4567777765 67677776665543 24667999999998766543 444 3455666799999999999554321
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.......++|+.+.+..+++. .+.+++.++|||+||++++.++.++|+.++++|+..|..
T Consensus 90 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 149 (315)
T 4f0j_A 90 -----PAHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIG 149 (315)
T ss_dssp -----CSSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSC
T ss_pred -----CCccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcc
Confidence 111245678888888887776 455699999999999999999999999999999998853
|
| >3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-15 Score=166.05 Aligned_cols=150 Identities=13% Similarity=0.059 Sum_probs=100.3
Q ss_pred CCeEEEEEEECCC--C--cEEEEEEEEecCcCCCCCccEEEEecCCCCCccC---------CcCcHHHHHHHHcCCEEEE
Q psy2521 523 LFQTKQVYFRSKD--G--TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL---------PTFSISRCMFLRHFNGIYA 589 (783)
Q Consensus 523 ~~~~~~~~~~s~d--g--~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~---------~~~~~~~~~~l~~~G~~v~ 589 (783)
.....++.|.+.+ | ..+.++++.|++....++.|+||++||+.+.... ..|.. ....|.++||.|+
T Consensus 43 ~v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~G~~V~ 121 (397)
T 3h2g_A 43 NVRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDP-LVTRLASQGYVVV 121 (397)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSH-HHHTTGGGTCEEE
T ss_pred CeEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHH-HHHHHHHCCCEEE
Confidence 3467778887754 4 4688999999886556789999999998776543 12333 3344556799999
Q ss_pred EecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHh-cCC----C-ceeE
Q psy2521 590 IPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KYTKPKYITIMGGSNGGLLVGACLN-QRP----E-LYGA 662 (783)
Q Consensus 590 ~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~-~~p----~-lf~a 662 (783)
++|+||.|..+...+...........+.|.+.++..+.++ ++.++++|+++|||+||++++.++. ..+ + .+.+
T Consensus 122 ~~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~ 201 (397)
T 3h2g_A 122 GSDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVA 201 (397)
T ss_dssp EECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEE
T ss_pred EecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEE
Confidence 9999997754321111000000113455666666666554 6666789999999999999987762 222 2 5778
Q ss_pred EEEcCCcchhh
Q psy2521 663 ALILVGALDML 673 (783)
Q Consensus 663 ~i~~~~~~d~~ 673 (783)
+++..+..|+.
T Consensus 202 ~~~~~~~~~l~ 212 (397)
T 3h2g_A 202 SAPISGPYALE 212 (397)
T ss_dssp EEEESCCSSHH
T ss_pred EecccccccHH
Confidence 88888877764
|
| >3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-16 Score=171.98 Aligned_cols=147 Identities=12% Similarity=-0.035 Sum_probs=109.4
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCcc------------CCcCc---HHHHHHHHcCCE
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV------------LPTFS---ISRCMFLRHFNG 586 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~------------~~~~~---~~~~~~l~~~G~ 586 (783)
..+..+.+.+.+.||.+++++++.|++. .++.|+||++||+.+... ...|. ..+...|+++||
T Consensus 88 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy 165 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGY 165 (398)
T ss_dssp SSEEEEEEEECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTC
T ss_pred CCEEEEEEEEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCC
Confidence 4678899999999999999999999874 578999999999865432 11121 124567778899
Q ss_pred EEEEecCCCCCCCChhHHh-----------------hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHH
Q psy2521 587 IYAIPNIRGGGELGEDWHN-----------------AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 649 (783)
Q Consensus 587 ~v~~~~~RG~g~~G~~~~~-----------------~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~ 649 (783)
+|+++|+||.|+.+..... .+. ........|+.++++||.++..+|++||+|+|+|+||+++
T Consensus 166 ~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 166 IAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGW-SYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp EEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred EEEEecCCCCCccccccccccccccchhhhhhHHhhcCC-CHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 9999999997766532210 000 1111234799999999999988999999999999999999
Q ss_pred HHHHhcCCCceeEEEEcCCcchh
Q psy2521 650 GACLNQRPELYGAALILVGALDM 672 (783)
Q Consensus 650 ~~~~~~~p~lf~a~i~~~~~~d~ 672 (783)
+.++...| .++++|+..++..+
T Consensus 245 ~~~aa~~~-~i~a~v~~~~~~~~ 266 (398)
T 3nuz_A 245 MVLGTLDT-SIYAFVYNDFLCQT 266 (398)
T ss_dssp HHHHHHCT-TCCEEEEESCBCCH
T ss_pred HHHHhcCC-cEEEEEEecccccc
Confidence 98888755 56777776554443
|
| >1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=9.4e-16 Score=153.03 Aligned_cols=183 Identities=16% Similarity=0.111 Sum_probs=126.0
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHc--CCEEEEEecCCC------CCCCChhHHhh-ccc---cCCcCh----
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRG------GGELGEDWHNA-GRL---LKKQNC---- 615 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG------~g~~G~~~~~~-g~~---~~~~~~---- 615 (783)
.++.|+||++||..+.... |. .....|++ +||.|+++|.+| +|..+..|.+. +.. ......
T Consensus 11 ~~~~~~vv~~HG~~~~~~~--~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~~ 87 (218)
T 1auo_A 11 KPADACVIWLHGLGADRYD--FM-PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVS 87 (218)
T ss_dssp SCCSEEEEEECCTTCCTTT--TH-HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHH
T ss_pred CCCCcEEEEEecCCCChhh--HH-HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccccchHHHHHH
Confidence 3678999999998765543 33 34566765 799999998774 22112223211 111 011122
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh-cCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCH
Q psy2521 616 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN-QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNK 694 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~-~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~ 694 (783)
.+|+.+.++++.+ ..+++++++++|+|+||.+++.++. ++|+.++++|+.+|..+.. .+..++ ..
T Consensus 88 ~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~---------~~~~~~----~~ 153 (218)
T 1auo_A 88 AKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF---------GDELEL----SA 153 (218)
T ss_dssp HHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC---------CTTCCC----CH
T ss_pred HHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc---------hhhhhh----hh
Confidence 3444555555554 2468889999999999999999999 9999999999999987640 010000 00
Q ss_pred HHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccc
Q psy2521 695 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 695 ~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~ 774 (783)
.. +..| +|+++|++|..|++.++.++++.++.. |.++++.+++ +||.+....
T Consensus 154 ------------~~-------~~~P-~l~i~G~~D~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~-~gH~~~~~~ 205 (218)
T 1auo_A 154 ------------SQ-------QRIP-ALCLHGQYDDVVQNAMGRSAFEHLKSR-------GVTVTWQEYP-MGHEVLPQE 205 (218)
T ss_dssp ------------HH-------HTCC-EEEEEETTCSSSCHHHHHHHHHHHHTT-------TCCEEEEEES-CSSSCCHHH
T ss_pred ------------cc-------cCCC-EEEEEeCCCceecHHHHHHHHHHHHhC-------CCceEEEEec-CCCccCHHH
Confidence 11 3445 999999999999999999999999987 7789999999 999986544
Q ss_pred hhhhh
Q psy2521 775 DIELK 779 (783)
Q Consensus 775 ~~~~~ 779 (783)
...+.
T Consensus 206 ~~~~~ 210 (218)
T 1auo_A 206 IHDIG 210 (218)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.4e-15 Score=159.72 Aligned_cols=246 Identities=9% Similarity=0.007 Sum_probs=154.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccccc-CeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKF-PSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~-~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..++|||||++|||..+.+|. ..|+++|+++|+....+...... ..+.|||||+.|+|.+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-------------- 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-------------- 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT--------------
T ss_pred eecCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC--------------
Confidence 4568899999999999987665 57999999999876555433322 348999999999999821
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEE-------------------EEEecCCcEEEEEEe-cCCCCcEEEEEEC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH-------------------SEVTDCGRYLLVSTS-NNTQGSDLHYFDL 349 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~-------------------~~~SpDGk~l~~~~~-~~~~~~~l~~~dl 349 (783)
.+||++++.+.. ...++..+.. +... +.|||||+++++... .......|+++|+
T Consensus 102 --~~l~~~d~~~~~--~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~ 175 (396)
T 3c5m_A 102 --LNLMKVDLETLE--EQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI 175 (396)
T ss_dssp --TEEEEEETTTCC--EEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET
T ss_pred --CcEEEEECCCCC--cEEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC
Confidence 269999987653 3345553332 2111 345677766654321 1123378999999
Q ss_pred CCCCCCcccCCCCceeeecCccc-eeEEEEe-eCCEEEEEECCCC--CCceEEEEcCCCCCCCCcEEeecCCCC-ceEEE
Q psy2521 350 HSLPDGKISGKFPLKTVIPGMDH-HHEIIAN-NGPELIVKTTKNA--PKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDV 424 (783)
Q Consensus 350 ~~g~~~~l~~~~~~~~l~~~~~~-~~~~~s~-dg~~l~~~t~~~~--~~~~L~~~d~~~~~~~~~~~li~~~~~-~~l~~ 424 (783)
.++. ...+...... ....|+| ||++|++.++... .+.+|+.++++++. ++.+...... .+...
T Consensus 176 ~~g~---------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~~ 243 (396)
T 3c5m_A 176 ETGE---------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---VRKIKEHAEGESCTHE 243 (396)
T ss_dssp TTCC---------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---CEESSCCCTTEEEEEE
T ss_pred CCCc---------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---eeEeeccCCCccccce
Confidence 8742 2223322111 2225999 8888999876321 12579999987654 4555553212 23333
Q ss_pred EEEeeCCEEEEEEecCCeeE--EEEEECCCCceeeeec-CCCeEEEeeeccc-cccEEEEEEecCCCC------------
Q psy2521 425 VAAVANNKLIVHYIQNVRSV--MDLHDLNTGKRLHSFP-LDLGQITHISGRR-KYNEVFYGFTSFLQP------------ 488 (783)
Q Consensus 425 ~~~~~g~~l~~~~~~~g~~~--l~~~dl~~G~~~~~l~-~~~g~v~~~s~~~-d~~~l~~~~ss~~~P------------ 488 (783)
.+.++++.|++....++... |+++|+.+|+. ..+. .+... +.+++ ++..+++..+ . .|
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~---~~~s~~dg~~l~~~~~-~-~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMVMPPCS---HLMSNFDGSLMVGDGC-D-APVDVADADSYNIE 317 (396)
T ss_dssp EECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEECCSEE---EEEECSSSSEEEEEEC-C-C----------CCC
T ss_pred EECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeeeCCCCC---CCccCCCCceEEEecC-C-cceeeccccccccC
Confidence 45556677888877766655 99999977765 3333 33222 55667 7775554332 2 44
Q ss_pred --ceEEEEeC
Q psy2521 489 --GTIYHCNI 496 (783)
Q Consensus 489 --~~vy~~d~ 496 (783)
..+|.+|+
T Consensus 318 ~~~~i~~~d~ 327 (396)
T 3c5m_A 318 NDPFLYVLNT 327 (396)
T ss_dssp CCCEEEEEET
T ss_pred CCCcEEEEec
Confidence 78999999
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-13 Score=152.77 Aligned_cols=243 Identities=16% Similarity=0.158 Sum_probs=165.8
Q ss_pred CCCcEEEEEEecCCCc-eEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEE
Q psy2521 218 DNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 296 (783)
Q Consensus 218 PDG~~la~~~~~~G~d-~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~ 296 (783)
+.+++|+|+....+.+ ..+|+++|++++.....+........++|||||+.|+|...+. ....|++
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~-------------~~~~i~~ 207 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-------------GRSALVI 207 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT-------------SSCEEEE
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecC-------------CCcEEEE
Confidence 4588999998764432 2789999998766544433333346899999999999998432 2357999
Q ss_pred EEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE-
Q psy2521 297 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE- 375 (783)
Q Consensus 297 ~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~- 375 (783)
+++.++.. ..+...+ .....+.|||||++|++.... .....||++|+.++. ...+.........
T Consensus 208 ~d~~tg~~--~~l~~~~---~~~~~~~~spdg~~la~~~~~-~g~~~i~~~d~~~~~---------~~~l~~~~~~~~~~ 272 (415)
T 2hqs_A 208 QTLANGAV--RQVASFP---RHNGAPAFSPDGSKLAFALSK-TGSLNLYVMDLASGQ---------IRQVTDGRSNNTEP 272 (415)
T ss_dssp EETTTCCE--EEEECCS---SCEEEEEECTTSSEEEEEECT-TSSCEEEEEETTTCC---------EEECCCCSSCEEEE
T ss_pred EECCCCcE--EEeecCC---CcccCEEEcCCCCEEEEEEec-CCCceEEEEECCCCC---------EEeCcCCCCcccce
Confidence 99987532 2333322 234689999999999987654 234789999998742 2223322222222
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
.|+|||+.|++.+++++ ..+|+.+|+.++. .+.+..+. .......+.++|+.|++....++...|++||+.+|+.
T Consensus 273 ~~spdg~~l~~~s~~~g-~~~i~~~d~~~~~---~~~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAG-RPQVYKVNINGGA---PQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EECTTSSEEEEEECTTS-SCEEEEEETTSSC---CEECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EECCCCCEEEEEECCCC-CcEEEEEECCCCC---EEEEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 59999999999887543 4579999998765 34444433 3444445666767888888777778999999977765
Q ss_pred eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 456 LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 456 ~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+.... .+..+.++|++..+++.... .....+|.+|+
T Consensus 348 -~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~~~~l~~~d~ 385 (415)
T 2hqs_A 348 -QVLSSTF-LDETPSLAPNGTMVIYSSSQ-GMGSVLNLVST 385 (415)
T ss_dssp -EECCCSS-SCEEEEECTTSSEEEEEEEE-TTEEEEEEEET
T ss_pred -EEecCCC-CcCCeEEcCCCCEEEEEEcC-CCccEEEEEEC
Confidence 5555432 45677888999877765543 33458999998
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.1e-14 Score=172.80 Aligned_cols=291 Identities=13% Similarity=0.070 Sum_probs=181.3
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCe--EEEeCCCCc----CCC-Cc-----EEEeeEEECCCCcEEEEE
Q psy2521 159 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGST--EVFLDPNKL----SKD-GT-----TALKLYAFSDNGKHFAYC 226 (783)
Q Consensus 159 ~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~--~~llD~n~~----~~~-g~-----~~l~~~~~SPDG~~la~~ 226 (783)
++..+...|+.|+|...++ | +.+..+++. ++|++++.+ +.+ +. ..+..++|||| ++++|+
T Consensus 27 ~~~~~~w~g~~~~~~~~~~------i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 27 YVVGLQWMGDNYVFIEGDD------L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp -CTTCEEETTEEEEEETTE------E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred cCCCCcCcCCeEEEEeCCc------E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 3344444477777765322 4 555556777 788887654 111 11 34778999999 889988
Q ss_pred EecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCC-----
Q psy2521 227 LSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT----- 301 (783)
Q Consensus 227 ~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt----- 301 (783)
.+ .+|+++|+++|+....+........++|||||+.|+|+. + ..|+++++.+
T Consensus 99 ~~------~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~--~---------------~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 99 TQ------GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR--N---------------HNLYIARGGKLGEGM 155 (706)
T ss_dssp ET------TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE--T---------------TEEEEEECBCTTSCC
T ss_pred EC------CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE--C---------------CeEEEEecCcccccC
Confidence 64 479999999998765544433457899999999999975 1 3699999876
Q ss_pred CCCCceeEEecCCCCe------------eEEEEEEecCCcEEEEEEecC-----------------------------CC
Q psy2521 302 EQDKDIPVVEFPNGRS------------LGLHSEVTDCGRYLLVSTSNN-----------------------------TQ 340 (783)
Q Consensus 302 ~~~~d~~v~~~~~~~~------------~~~~~~~SpDGk~l~~~~~~~-----------------------------~~ 340 (783)
+... .+........ ....+.|||||++|++...+. ..
T Consensus 156 g~~~--~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 156 SRAI--AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCE--ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred CCcE--EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 4322 1111111100 124688999999999886321 12
Q ss_pred CcEEEEEECCCCCCCcccCCCCceeeec--Ccccee--EEEEeeCCEEEEEE-CCCCCCceEEEEcCCCCCCCCcEEeec
Q psy2521 341 GSDLHYFDLHSLPDGKISGKFPLKTVIP--GMDHHH--EIIANNGPELIVKT-TKNAPKGKVVTINLNNPCEKNWKTLIP 415 (783)
Q Consensus 341 ~~~l~~~dl~~g~~~~l~~~~~~~~l~~--~~~~~~--~~~s~dg~~l~~~t-~~~~~~~~L~~~d~~~~~~~~~~~li~ 415 (783)
...|+++|++++. ...+.. ...... ..|+|||+.|++.+ ++......|+.+|+.++. ..+.+..
T Consensus 234 ~~~l~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~ 302 (706)
T 2z3z_A 234 HVTVGIYHLATGK---------TVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFV 302 (706)
T ss_dssp EEEEEEEETTTTE---------EEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEE
T ss_pred eeEEEEEECCCCc---------eEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEE
Confidence 3689999998742 111221 111121 25999999998865 444556789999998762 1444543
Q ss_pred CCCCce---EEE-EEEe--eCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEe-eeccccccEEEEEEecCCCC
Q psy2521 416 EDENRT---LDV-VAAV--ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITH-ISGRRKYNEVFYGFTSFLQP 488 (783)
Q Consensus 416 ~~~~~~---l~~-~~~~--~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~-~s~~~d~~~l~~~~ss~~~P 488 (783)
+..... ... .+++ + +.+++....++..+|+.++. +|+.++.++.....+.. +.++++++.+++..+. ..|
T Consensus 303 ~~~~~~~~~~~~~~~sp~~d-g~~l~~~~~~g~~~l~~~~~-~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~-~~~ 379 (706)
T 2z3z_A 303 ETDKHYVEPLHPLTFLPGSN-NQFIWQSRRDGWNHLYLYDT-TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE-ASP 379 (706)
T ss_dssp EECSSCCCCCSCCEECTTCS-SEEEEEECTTSSCEEEEEET-TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS-SCT
T ss_pred ccCCCeECccCCceeecCCC-CEEEEEEccCCccEEEEEEC-CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC-CCC
Confidence 322211 122 3444 4 66777788888889999997 56666777765444544 6788999888876644 333
Q ss_pred --ceEEEEeC
Q psy2521 489 --GTIYHCNI 496 (783)
Q Consensus 489 --~~vy~~d~ 496 (783)
..+|++|+
T Consensus 380 ~~~~l~~~d~ 389 (706)
T 2z3z_A 380 LERHFYCIDI 389 (706)
T ss_dssp TCBEEEEEET
T ss_pred ceEEEEEEEc
Confidence 47999998
|
| >4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=151.34 Aligned_cols=173 Identities=12% Similarity=0.012 Sum_probs=108.5
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcC--CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
.|+|||+||..+..... ....+..+++++ ||.|+++|++|. |++| .+.++.++.+ .
T Consensus 2 mptIl~lHGf~ss~~s~-k~~~l~~~~~~~~~~~~v~~pdl~~~---g~~~----------------~~~l~~~~~~--~ 59 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSA-KATTFKSWLQQHHPHIEMQIPQLPPY---PAEA----------------AEMLESIVMD--K 59 (202)
T ss_dssp -CEEEEECCTTCCTTCH-HHHHHHHHHHHHCTTSEEECCCCCSS---HHHH----------------HHHHHHHHHH--H
T ss_pred CcEEEEeCCCCCCCCcc-HHHHHHHHHHHcCCCcEEEEeCCCCC---HHHH----------------HHHHHHHHHh--c
Confidence 38999999953332211 112234555544 599999999984 4322 2333444433 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCC--CCHHHHHHHHhcCcccCCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSP--NNKTHFHNLLSYSPLHNIK 710 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p--~~~~~~~~~~~~sp~~~v~ 710 (783)
.+++|+|+|+|+||++++.++.++|+...+++..++..+........ ......+.+ ........ ..+....+.
T Consensus 60 ~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 134 (202)
T 4fle_A 60 AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGE---NQNPYTGQKYVLESRHIYD--LKAMQIEKL 134 (202)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEE---EECTTTCCEEEECHHHHHH--HHTTCCSSC
T ss_pred CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhh---hccccccccccchHHHHHH--HHhhhhhhh
Confidence 45799999999999999999999999888887777766554432111 000111111 11222221 122333344
Q ss_pred CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 711 ~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
. +..| +||+||++|.+||+.++.++++ . .++.+++++||++...
T Consensus 135 ~----~~~P-~LiihG~~D~~Vp~~~s~~l~~---~-----------~~l~i~~g~~H~~~~~ 178 (202)
T 4fle_A 135 E----SPDL-LWLLQQTGDEVLDYRQAVAYYT---P-----------CRQTVESGGNHAFVGF 178 (202)
T ss_dssp S----CGGG-EEEEEETTCSSSCHHHHHHHTT---T-----------SEEEEESSCCTTCTTG
T ss_pred c----cCce-EEEEEeCCCCCCCHHHHHHHhh---C-----------CEEEEECCCCcCCCCH
Confidence 3 5677 9999999999999999887752 2 2688899999998653
|
| >3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=155.22 Aligned_cols=199 Identities=15% Similarity=0.118 Sum_probs=129.8
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC-ChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL-GEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~-G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
.+..|+||++||..+.... |. .....|+++||.|+++|+||.|.. +...... .......+|+.+++++|..+
T Consensus 19 ~~~~~~vv~~HG~~~~~~~--~~-~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~---~~~~~~~~d~~~~i~~l~~~- 91 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPND--MN-FMARALQRSGYGVYVPLFSGHGTVEPLDILTK---GNPDIWWAESSAAVAHMTAK- 91 (251)
T ss_dssp CCSSEEEEEECCTTCCGGG--GH-HHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH---CCHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCceEEEeCCCCCCHHH--HH-HHHHHHHHCCCEEEecCCCCCCCCChhhhcCc---ccHHHHHHHHHHHHHHHHHh-
Confidence 3466899999998766543 43 344556667999999999997655 3222221 01122367888889998876
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc---cccchhhhCCCCCHHHH--------HH
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI---AYYSESEFGSPNNKTHF--------HN 699 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~---~~~~~~~~g~p~~~~~~--------~~ 699 (783)
.++++++|||+||++++.++.++|+.++++++..|............ ...+....+.......+ ..
T Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (251)
T 3dkr_A 92 ---YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAA 168 (251)
T ss_dssp ---CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHH
Confidence 57999999999999999999999999999999998876422110000 00000111111111111 11
Q ss_pred HHhcC--cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 700 LLSYS--PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 700 ~~~~s--p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+.... +...+.. +..| +|+++|.+|..|++.++.++++++... .++.+.+++++||.+...
T Consensus 169 ~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~gH~~~~~ 231 (251)
T 3dkr_A 169 IDQFATTVAADLNL----VKQP-TFIGQAGQDELVDGRLAYQLRDALINA--------ARVDFHWYDDAKHVITVN 231 (251)
T ss_dssp HHHHHHHHHHTGGG----CCSC-EEEEEETTCSSBCTTHHHHHHHHCTTC--------SCEEEEEETTCCSCTTTS
T ss_pred HHHHHHHHhccccc----cCCC-EEEEecCCCcccChHHHHHHHHHhcCC--------CCceEEEeCCCCcccccc
Confidence 11110 1122232 4555 999999999999999999888877540 367899999999998644
|
| >1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.63 E-value=2.6e-15 Score=159.03 Aligned_cols=219 Identities=14% Similarity=0.127 Sum_probs=133.3
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC-CCCChhHH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWH 604 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~~~~ 604 (783)
++...+.+.||.++.++...|.+. ..++.|+||++||..+... .|.. ....|+++||.|+.+|+||+ |.......
T Consensus 7 ~~~~~i~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~~--~~~~-~~~~L~~~G~~Vi~~D~rGh~G~S~~~~~ 82 (305)
T 1tht_A 7 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRMD--HFAG-LAEYLSTNGFHVFRYDSLHHVGLSSGSID 82 (305)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGGG--GGHH-HHHHHHTTTCCEEEECCCBCC--------
T ss_pred ceEEEEEcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccCch--HHHH-HHHHHHHCCCEEEEeeCCCCCCCCCCccc
Confidence 455667788999999988876531 1235689999999766543 3443 34566667999999999996 53321110
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
...-....+|+.+++++|.+.+ .+++.++||||||.+++.++.+ | .++++|+..|+.++...........+
T Consensus 83 ----~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~ 153 (305)
T 1tht_A 83 ----EFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDY 153 (305)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCG
T ss_pred ----ceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhh
Confidence 0011122467888888887543 4689999999999999999887 7 77888888876543221100000000
Q ss_pred h----hh------h-CCCCCHHHH-HHHHhcC------cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHh
Q psy2521 685 E----SE------F-GSPNNKTHF-HNLLSYS------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 746 (783)
Q Consensus 685 ~----~~------~-g~p~~~~~~-~~~~~~s------p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~ 746 (783)
. .. + +.......+ ....... +...+.. +++| +|+++|++|..||+.++.++++.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-vLii~G~~D~~vp~~~~~~l~~~i~~ 228 (305)
T 1tht_A 154 LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN----TSVP-LIAFTANNDDWVKQEEVYDMLAHIRT 228 (305)
T ss_dssp GGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTT----CCSC-EEEEEETTCTTSCHHHHHHHHTTCTT
T ss_pred hhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhh----cCCC-EEEEEeCCCCccCHHHHHHHHHhcCC
Confidence 0 00 0 000001111 1111110 1112233 5667 99999999999999988777655432
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
...++.+++++||...
T Consensus 229 ---------~~~~l~~i~~agH~~~ 244 (305)
T 1tht_A 229 ---------GHCKLYSLLGSSHDLG 244 (305)
T ss_dssp ---------CCEEEEEETTCCSCTT
T ss_pred ---------CCcEEEEeCCCCCchh
Confidence 2468999999999985
|
| >1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=6.1e-15 Score=160.07 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=101.4
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcC--CCCCccEEEEecCCCCCccCCcCc---HHHHHHHHcCCEEEEEecCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGAL--RNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~--~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
..+..+...+++.||.++.+..+.|.... ..++.|+||++||..+....+... ..+...|+++||.|+++|+||.
T Consensus 23 ~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEeEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 34567888899999999999887655311 114689999999987766433211 1233456667999999999996
Q ss_pred CCCChhHH--hhcc---ccCCcChHH-HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcC
Q psy2521 597 GELGEDWH--NAGR---LLKKQNCFD-DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILV 667 (783)
Q Consensus 597 g~~G~~~~--~~g~---~~~~~~~~~-D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~ 667 (783)
|.....-. .... ...-....+ |+.+++++++++ .+.+++.++|||+||.+++.++.++|+ .++++|+..
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 54331100 0000 000011234 777788888765 334689999999999999999999998 789999988
Q ss_pred Ccch
Q psy2521 668 GALD 671 (783)
Q Consensus 668 ~~~d 671 (783)
|...
T Consensus 181 ~~~~ 184 (377)
T 1k8q_A 181 PVAT 184 (377)
T ss_dssp CCSC
T ss_pred Cchh
Confidence 8654
|
| >2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.63 E-value=7.8e-16 Score=157.79 Aligned_cols=176 Identities=15% Similarity=0.148 Sum_probs=125.4
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEe--cCCCCCCCChhHHhh-ccc----cCCcChHHHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP--NIRGGGELGEDWHNA-GRL----LKKQNCFDDFQAAAEY 625 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~RG~g~~G~~~~~~-g~~----~~~~~~~~D~~a~~~~ 625 (783)
++.|+||++||+.+... .|.. ....|++ +|.|+++ |+||.|+++ |... ... .......+|+.+.+++
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~-~~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFFD-FGARLLP-QATILSPVGDVSEHGAAR--FFRRTGEGVYDMVDLERATGKMADFIKA 133 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHHH-HHHHHST-TSEEEEECCSEEETTEEE--SSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHHH-HHHhcCC-CceEEEecCCcCCCCCcc--cccCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 56799999999876543 2332 3455664 7999999 788865332 2111 000 0111236778888888
Q ss_pred HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCc
Q psy2521 626 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 705 (783)
Q Consensus 626 l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp 705 (783)
++++. +.+|++|+|+|+||++++.++.++|++++++|+.+|..+... .+
T Consensus 134 ~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-----------------------------~~ 182 (251)
T 2r8b_A 134 NREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-----------------------------KI 182 (251)
T ss_dssp HHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-----------------------------CC
T ss_pred HHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-----------------------------cc
Confidence 87653 778999999999999999999999999999999999764311 00
Q ss_pred ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 706 ~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
.... +..| +|+++|++|..|++.++.+++++|++. +.++.+ +++++||++.......+.+
T Consensus 183 --~~~~----~~~P-~li~~g~~D~~~~~~~~~~~~~~l~~~-------~~~~~~-~~~~~gH~~~~~~~~~~~~ 242 (251)
T 2r8b_A 183 --SPAK----PTRR-VLITAGERDPICPVQLTKALEESLKAQ-------GGTVET-VWHPGGHEIRSGEIDAVRG 242 (251)
T ss_dssp --CCCC----TTCE-EEEEEETTCTTSCHHHHHHHHHHHHHH-------SSEEEE-EEESSCSSCCHHHHHHHHH
T ss_pred --cccc----cCCc-EEEeccCCCccCCHHHHHHHHHHHHHc-------CCeEEE-EecCCCCccCHHHHHHHHH
Confidence 1111 3445 999999999999999999999999987 677776 5567899986544444433
|
| >3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=4.3e-15 Score=149.65 Aligned_cols=183 Identities=17% Similarity=0.130 Sum_probs=125.5
Q ss_pred CCCCccEEEEecCCCCCccCCcCcHHHHHHHHc--CCEEEEEecCCCC------CCCChhHHhh-ccc---cCCcChH--
Q psy2521 551 RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRGG------GELGEDWHNA-GRL---LKKQNCF-- 616 (783)
Q Consensus 551 ~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG~------g~~G~~~~~~-g~~---~~~~~~~-- 616 (783)
.+++.|+||++||+.+.... |.. ....|++ +||.|+++|++|. |..+..|.+. |.. ......+
T Consensus 20 ~~~~~~~vv~lHG~~~~~~~--~~~-~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 96 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRTD--FKP-VAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNA 96 (226)
T ss_dssp CTTCCEEEEEECCTTCCGGG--GHH-HHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHH
T ss_pred CCCCCCEEEEEecCCCChHH--HHH-HHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHH
Confidence 35678999999998765432 433 3455664 6999999988842 1111122211 111 1111223
Q ss_pred --HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh-cCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCC
Q psy2521 617 --DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN-QRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 693 (783)
Q Consensus 617 --~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~-~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~ 693 (783)
+|+.+.++.+.+. .+++++++|+|+|+||.+++.++. ++|+.++++|+.+|..+.... +
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~--------~--------- 158 (226)
T 3cn9_A 97 SADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDD--------L--------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGG--------C---------
T ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchh--------h---------
Confidence 3444444444442 467889999999999999999999 999999999999997764321 0
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 694 KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 694 ~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
.+.+ . .+..| +|+++|..|..|++.++.++++.|+.. |.++++.+++ +||.+...
T Consensus 159 --------~~~~----~----~~~~P-~lii~G~~D~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~-~gH~~~~~ 213 (226)
T 3cn9_A 159 --------ALDE----R----HKRIP-VLHLHGSQDDVVDPALGRAAHDALQAQ-------GVEVGWHDYP-MGHEVSLE 213 (226)
T ss_dssp --------CCCT----G----GGGCC-EEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCEEEEEES-CCSSCCHH
T ss_pred --------hhcc----c----ccCCC-EEEEecCCCCccCHHHHHHHHHHHHHc-------CCceeEEEec-CCCCcchh
Confidence 0000 1 14555 999999999999999999999999987 7789999999 99998654
Q ss_pred chhhhh
Q psy2521 774 LDIELK 779 (783)
Q Consensus 774 ~~~~~~ 779 (783)
....+.
T Consensus 214 ~~~~i~ 219 (226)
T 3cn9_A 214 EIHDIG 219 (226)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 444443
|
| >2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.4e-14 Score=150.92 Aligned_cols=210 Identities=10% Similarity=0.020 Sum_probs=128.5
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+..+|. ++.++.|++ ++.|+|||+|||...... ..+......++++.|+.|+.+|||+..+.. |
T Consensus 10 ~~~~~~--~~~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~~--~------- 74 (274)
T 2qru_A 10 TLANGA--TVTIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNTK--I------- 74 (274)
T ss_dssp ECTTSC--EEEEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTSC--H-------
T ss_pred cccCCe--eEEEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCCC--C-------
Confidence 344664 445666653 467999999998643322 224333445667779999999999865431 2
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh---cCCCceeEEEEcCCcchhhhcccc---cc---c
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN---QRPELYGAALILVGALDMLRFNKF---TI---A 681 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~---~~p~lf~a~i~~~~~~d~~~~~~~---~~---~ 681 (783)
...++|+.++++||.++.. +++||+|+|+|+||.|++.++. ..|...++++...|..|....... .. .
T Consensus 75 --p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~ 151 (274)
T 2qru_A 75 --DHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAIS 151 (274)
T ss_dssp --HHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCC
T ss_pred --cHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhcccccc
Confidence 2247899999999987642 3789999999999999999886 357778888888887772110000 00 0
Q ss_pred ccchhhh-C-CC-----CCH--HH---------HHHHHhcCcc-----cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 682 YYSESEF-G-SP-----NNK--TH---------FHNLLSYSPL-----HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 682 ~~~~~~~-g-~p-----~~~--~~---------~~~~~~~sp~-----~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
..+...+ . .+ ... .. +..+...... ..+... .-...||+||++|+.|..++..++.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~lpP~li~~G~~D~~~~~~~~~ 230 (274)
T 2qru_A 152 AKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDE-TLKTFPPCFSTASSSDEEVPFRYSK 230 (274)
T ss_dssp SGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHH-HHHTSCCEEEEEETTCSSSCTHHHH
T ss_pred HHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChh-hhcCCCCEEEEEecCCCCcCHHHHH
Confidence 0000000 0 00 000 00 0001000000 011100 0023477999999999999988777
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++++++. .+++.++++++|++.
T Consensus 231 ~l~~~~~-----------~~~l~~~~g~~H~~~ 252 (274)
T 2qru_A 231 KIGRTIP-----------ESTFKAVYYLEHDFL 252 (274)
T ss_dssp HHHHHST-----------TCEEEEECSCCSCGG
T ss_pred HHHHhCC-----------CcEEEEcCCCCcCCc
Confidence 7666543 458999999999984
|
| >3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482} | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=168.11 Aligned_cols=148 Identities=10% Similarity=-0.082 Sum_probs=110.4
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC------------CcCc---HHHHHHHHcCCE
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL------------PTFS---ISRCMFLRHFNG 586 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~------------~~~~---~~~~~~l~~~G~ 586 (783)
..+..+.+.+++.+|..++++++.|++. .++.|+||++||..+.... ..|. ..+...|+++||
T Consensus 83 ~g~~~e~v~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~ 160 (391)
T 3g8y_A 83 EGYILEKWEFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGY 160 (391)
T ss_dssp TTEEEEEEEECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTC
T ss_pred CCEEEEEEEEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCC
Confidence 4678899999999999999999999864 5789999999997554310 0111 124566777899
Q ss_pred EEEEecCCCCCCCChhHH----------hh-------ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHH
Q psy2521 587 IYAIPNIRGGGELGEDWH----------NA-------GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLV 649 (783)
Q Consensus 587 ~v~~~~~RG~g~~G~~~~----------~~-------g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~ 649 (783)
+|+++|+||.|+.+..-. .. +. ........|+.++++||.++..+|++||+|+|+|+||+++
T Consensus 161 ~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~a 239 (391)
T 3g8y_A 161 VAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGW-SWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPM 239 (391)
T ss_dssp EEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHH
T ss_pred EEEEecCCCccccCCcccccccccchHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHH
Confidence 999999999776653210 00 00 0011123799999999999989999999999999999999
Q ss_pred HHHHhcCCCceeEEEEcCCcchhh
Q psy2521 650 GACLNQRPELYGAALILVGALDML 673 (783)
Q Consensus 650 ~~~~~~~p~lf~a~i~~~~~~d~~ 673 (783)
+.++... +.++++|+..++.++.
T Consensus 240 l~~a~~~-~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 240 MVLGVLD-KDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHHHC-TTCCEEEEESCBCCHH
T ss_pred HHHHHcC-CceeEEEEccCCCCcc
Confidence 9888875 4678888877777664
|
| >2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=6.7e-15 Score=153.68 Aligned_cols=209 Identities=13% Similarity=0.063 Sum_probs=135.2
Q ss_pred eEEEEEEECCC-CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc-CCEEEEEecCCCCCCCC--
Q psy2521 525 QTKQVYFRSKD-GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELG-- 600 (783)
Q Consensus 525 ~~~~~~~~s~d-g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G-- 600 (783)
..+++.+.|.+ |..+.++++.|+++.+.+++|+|++.||+..... ........+.+ .+.+|+.++++++..+.
T Consensus 12 ~~~~~~~~S~~~~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~---~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~ 88 (278)
T 2gzs_A 12 HFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR---LDDELLKQLSEKTPPVIVAVGYQTNLPFDLN 88 (278)
T ss_dssp EEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH---CCHHHHHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred ceEEEEEEcCCCCceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH---HHHHHHHHhccCCCeEEEEEcCCCCCcCccc
Confidence 57788888876 7899999999999876778998877777543211 11223333443 57788888887643221
Q ss_pred ---hhHHhhc-------------cccCCcChHHHHHH--HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeE
Q psy2521 601 ---EDWHNAG-------------RLLKKQNCFDDFQA--AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGA 662 (783)
Q Consensus 601 ---~~~~~~g-------------~~~~~~~~~~D~~a--~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a 662 (783)
.++.... ....+...+.+++. .+.++.++..+|++|++|+|+||||++++.++.+ |++|++
T Consensus 89 ~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~ 167 (278)
T 2gzs_A 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRS 167 (278)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSE
T ss_pred ccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCe
Confidence 1111110 00011123444442 2334444445888999999999999999999999 999999
Q ss_pred EEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCC--------Cc
Q psy2521 663 ALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV--------PP 734 (783)
Q Consensus 663 ~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V--------~~ 734 (783)
+++.+|.+.+.. ...+..+..+.+- . ...+++++.+|+.|.++ +.
T Consensus 168 ~~~~s~~~~~~~-------------------~~~~~~~~~~~~~----~----~~~~~i~l~~G~~d~~~~~~~~~~~~~ 220 (278)
T 2gzs_A 168 YYSASPSLGRGY-------------------DALLSRVTAVEPL----Q----FCTKHLAIMEGSATQGDNRETHAVGVL 220 (278)
T ss_dssp EEEESGGGSTTH-------------------HHHHHHHHTSCTT----T----TTTCEEEEEECCC-----------CHH
T ss_pred EEEeCcchhcCc-------------------chHHHHHHHhhcc----C----CCCCcEEEEecCccccccccchhhhhH
Confidence 999998753211 0011112222211 1 12235999999999875 47
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.++.+++++|++. |.++.+.++++++|+..
T Consensus 221 ~~~~~~~~~L~~~-------g~~~~~~~~~g~~H~~~ 250 (278)
T 2gzs_A 221 SKIHTTLTILKDK-------GVNAVFWDFPNLGHGPM 250 (278)
T ss_dssp HHHHHHHHHHHHT-------TCCEEEEECTTCCHHHH
T ss_pred HHHHHHHHHHHcC-------CCeeEEEEcCCCCccch
Confidence 8999999999998 99999999999999853
|
| >2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-15 Score=150.17 Aligned_cols=178 Identities=11% Similarity=0.058 Sum_probs=127.2
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEe--cCCCCCCCChhHHhh-ccc----cCCcChHHHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIP--NIRGGGELGEDWHNA-GRL----LKKQNCFDDFQAAAEY 625 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~RG~g~~G~~~~~~-g~~----~~~~~~~~D~~a~~~~ 625 (783)
++.|+||++||+.+.... |. .....|++ ||.|+++ |.||.|..+ |... ... ........|+.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~~~~--~~-~~~~~l~~-g~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNELD--LL-PLAEIVDS-EASVLSVRGNVLENGMPR--FFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCCTTT--TH-HHHHHHHT-TSCEEEECCSEEETTEEE--SSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChhH--HH-HHHHHhcc-CceEEEecCcccCCcchh--hccccCccCcChhhHHHHHHHHHHHHHH
Confidence 468999999998765433 33 34566776 9999999 788854321 1110 000 0001224456666666
Q ss_pred HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCc
Q psy2521 626 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 705 (783)
Q Consensus 626 l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp 705 (783)
+.++..+++++++++|+|+||++++.++.++|+.++++|+..|..+...
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 6776667889999999999999999999999999999999998764211
Q ss_pred ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 706 ~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
...... ...| +|+++|+.|..+++.++.++++.++.. +.++.+ +++++||.+.......+.+
T Consensus 159 -~~~~~~---~~~p-~l~~~G~~D~~~~~~~~~~~~~~l~~~-------~~~~~~-~~~~~gH~~~~~~~~~~~~ 220 (226)
T 2h1i_A 159 -MQLANL---AGKS-VFIAAGTNDPICSSAESEELKVLLENA-------NANVTM-HWENRGHQLTMGEVEKAKE 220 (226)
T ss_dssp -CCCCCC---TTCE-EEEEEESSCSSSCHHHHHHHHHHHHTT-------TCEEEE-EEESSTTSCCHHHHHHHHH
T ss_pred -cccccc---cCCc-EEEEeCCCCCcCCHHHHHHHHHHHHhc-------CCeEEE-EeCCCCCCCCHHHHHHHHH
Confidence 011110 2444 999999999999999999999999877 778888 9999999986544444433
|
| >3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.4e-15 Score=157.12 Aligned_cols=195 Identities=14% Similarity=0.125 Sum_probs=127.4
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
++.|+||++||..+.... |.. ....|+++||.|+++|+||.|........ .......+|+.++++++.++
T Consensus 38 g~~~~vv~~HG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~~~~----~~~~~~~~d~~~~i~~l~~~--- 107 (270)
T 3rm3_A 38 NGPVGVLLVHGFTGTPHS--MRP-LAEAYAKAGYTVCLPRLKGHGTHYEDMER----TTFHDWVASVEEGYGWLKQR--- 107 (270)
T ss_dssp CSSEEEEEECCTTCCGGG--THH-HHHHHHHTTCEEEECCCTTCSSCHHHHHT----CCHHHHHHHHHHHHHHHHTT---
T ss_pred CCCeEEEEECCCCCChhH--HHH-HHHHHHHCCCEEEEeCCCCCCCCcccccc----CCHHHHHHHHHHHHHHHHhh---
Confidence 355999999998765543 443 44556667999999999996654322111 12223467888888888765
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc----ccccchhhhCCC----C---------CHH
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IAYYSESEFGSP----N---------NKT 695 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~----~~~~~~~~~g~p----~---------~~~ 695 (783)
.++++++|+|+||++++.++.++|+ ++++|+..|..++....... ....|...++.. . ...
T Consensus 108 -~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (270)
T 3rm3_A 108 -CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTA 185 (270)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHH
T ss_pred -CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChh
Confidence 5799999999999999999999999 99999999977654321100 001111111110 0 001
Q ss_pred HHHHHHh-cC-cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 696 HFHNLLS-YS-PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 696 ~~~~~~~-~s-p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
.+..+.. .. ....++. ++.| +|+++|+.|..|++.++.++++.+.. .++++.+++++||.+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~----~~~P-~lii~G~~D~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~~ 251 (270)
T 3rm3_A 186 SLLQLARLMAQTKAKLDR----IVCP-ALIFVSDEDHVVPPGNADIIFQGISS---------TEKEIVRLRNSYHVATLD 251 (270)
T ss_dssp HHHHHHHHHHHHHHTGGG----CCSC-EEEEEETTCSSSCTTHHHHHHHHSCC---------SSEEEEEESSCCSCGGGS
T ss_pred HHHHHHHHHHHHHhhhhh----cCCC-EEEEECCCCcccCHHHHHHHHHhcCC---------CcceEEEeCCCCcccccC
Confidence 1110100 00 1112222 4556 99999999999999999888877653 357899999999998644
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.9e-14 Score=168.33 Aligned_cols=297 Identities=12% Similarity=0.084 Sum_probs=181.3
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCc----eE
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD----WN 235 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d----~~ 235 (783)
...++++|.+++ .. .+. .+++.+..+++...+++...... ..+..++|||||++|||+....+.. ..
T Consensus 21 ~~~~spdg~~~~-~~---~dg--~i~~~d~~~g~~~~~~~~~~~~~---~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 21 EAKWISDTEFIY-RE---QKG--TVRLWNVETNTSTVLIEGKKIES---LRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCBSSSSCBCC-CC---SSS--CEEEBCGGGCCCEEEECTTTTTT---TTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccEEcCCCcEEE-Ee---CCC--CEEEEECCCCcEEEEeccccccc---cccceEEECCCCCEEEEEecCccceeeccee
Confidence 345778888443 31 122 45555554566667776543211 1256899999999999998654322 26
Q ss_pred EEEEEECCCCcccccccccc---ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec
Q psy2521 236 TLHIKDVDTGKDYPEVLKNV---KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~---~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~ 312 (783)
+|+++|+++|+....+.... ....++|||||+.|+|.+. ..||++++.++.. +.+...
T Consensus 92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-----------------~~i~~~~~~~g~~--~~~~~~ 152 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-----------------NNIYYCAHVGKQA--IRVVST 152 (723)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-----------------TEEEEESSSSSCC--EEEECC
T ss_pred eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-----------------CeEEEEECCCCce--EEEecC
Confidence 89999999998643332211 1357899999999999981 2688888876532 233332
Q ss_pred CCCCe----------------eEEEEEEecCCcEEEEEEecCCC------------------------------CcEEEE
Q psy2521 313 PNGRS----------------LGLHSEVTDCGRYLLVSTSNNTQ------------------------------GSDLHY 346 (783)
Q Consensus 313 ~~~~~----------------~~~~~~~SpDGk~l~~~~~~~~~------------------------------~~~l~~ 346 (783)
..... ....+.|||||++|++....... ...|++
T Consensus 153 ~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~ 232 (723)
T 1xfd_A 153 GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHV 232 (723)
T ss_dssp CBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEE
T ss_pred CCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEE
Confidence 11110 01468999999999998754210 138999
Q ss_pred EECCCCCCCcccCCCCceeeecC-----ccce-e-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-
Q psy2521 347 FDLHSLPDGKISGKFPLKTVIPG-----MDHH-H-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE- 418 (783)
Q Consensus 347 ~dl~~g~~~~l~~~~~~~~l~~~-----~~~~-~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~- 418 (783)
+|+.++.. ...+... .... . ..|+|||+.|++.+++......|+.+|++++. ...++....
T Consensus 233 ~d~~~~~~--------~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~~~ 301 (723)
T 1xfd_A 233 IGLNGPTH--------DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDESE 301 (723)
T ss_dssp EESSSSCC--------CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEECS
T ss_pred EECCCCce--------eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc---ceEEEEeccC
Confidence 99987421 1112211 0111 1 25999999887777766566789999998765 344433221
Q ss_pred Cce----EEEEEEeeCCEEEEE-EecCC----eeEEEEEE-CCCCce--eeeecCCCeEEE-eeeccccccEEEEEEecC
Q psy2521 419 NRT----LDVVAAVANNKLIVH-YIQNV----RSVMDLHD-LNTGKR--LHSFPLDLGQIT-HISGRRKYNEVFYGFTSF 485 (783)
Q Consensus 419 ~~~----l~~~~~~~g~~l~~~-~~~~g----~~~l~~~d-l~~G~~--~~~l~~~~g~v~-~~s~~~d~~~l~~~~ss~ 485 (783)
..+ ....++++|+.|++. ...++ ..+|+++| ..+++. .+.++.....+. .+.+++|++.+++..+.
T Consensus 302 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~- 380 (723)
T 1xfd_A 302 AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTE- 380 (723)
T ss_dssp SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESS-
T ss_pred CEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcC-
Confidence 111 133456676778876 66666 67899999 544441 456664333332 35788999988876543
Q ss_pred CCC--ceEEEEeC
Q psy2521 486 LQP--GTIYHCNI 496 (783)
Q Consensus 486 ~~P--~~vy~~d~ 496 (783)
..| ..+|.+++
T Consensus 381 ~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 381 DLPRRRQLYSANT 393 (723)
T ss_dssp SCTTCCEEEEECS
T ss_pred CCCcceEEEEEeC
Confidence 223 34666665
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-14 Score=170.34 Aligned_cols=295 Identities=10% Similarity=0.003 Sum_probs=176.5
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC----CceEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG----SDWNT 236 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G----~d~~~ 236 (783)
..++++| .+.+.. . . ..|++.+..+++.+.+++...... ..+..++|||||++|||+.+.++ +...+
T Consensus 21 ~~~s~dg-~~~~~~--~-d--~~i~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 21 PNWISGQ-EYLHQS--A-D--NNIVLYNIETGQSYTILSNRTMKS---VNASNYGLSPDRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CEESSSS-EEEEEC--T-T--SCEEEEESSSCCEEEEECHHHHHT---TTCSEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cEECCCC-eEEEEc--C-C--CCEEEEEcCCCcEEEEEccccccc---cceeeEEECCCCCeEEEEecCceeEEeecceE
Confidence 3455677 444432 1 2 246666666777788887553311 12567999999999999987543 23478
Q ss_pred EEEEECCCCcc---ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecC
Q psy2521 237 LHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 313 (783)
Q Consensus 237 i~v~Dl~tg~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~ 313 (783)
|+++|+++|+. .... . ....++|||||+.|+|++ + ..|+++++.++... .+.....
T Consensus 92 i~~~d~~~g~~~~~~~l~-~--~~~~~~~SPDG~~la~~~--~---------------~~i~~~~~~~g~~~-~l~~~~~ 150 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNELP-R--PIQYLCWSPVGSKLAYVY--Q---------------NNIYLKQRPGDPPF-QITFNGR 150 (719)
T ss_dssp EEEEETTTTEECCSSCCC-S--SBCCEEECSSTTCEEEEE--T---------------TEEEEESSTTSCCE-ECCCCCB
T ss_pred EEEEECCCCccccceecC-c--ccccceECCCCCEEEEEE--C---------------CeEEEEeCCCCCcE-EEecCCC
Confidence 99999999987 3332 2 236899999999999997 1 26888888765321 1111110
Q ss_pred CCC------ee---------EEEEEEecCCcEEEEEEecCCC------------------------------CcEEEEEE
Q psy2521 314 NGR------SL---------GLHSEVTDCGRYLLVSTSNNTQ------------------------------GSDLHYFD 348 (783)
Q Consensus 314 ~~~------~~---------~~~~~~SpDGk~l~~~~~~~~~------------------------------~~~l~~~d 348 (783)
... .+ ...+.|||||++|++.+.+... ...|+++|
T Consensus 151 ~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d 230 (719)
T 1z68_A 151 ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID 230 (719)
T ss_dssp TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence 000 00 1368999999999998754221 13889999
Q ss_pred CCCCCCCcccCCCCceeee-----cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEc----CCCCCCCCcEEeec--
Q psy2521 349 LHSLPDGKISGKFPLKTVI-----PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTIN----LNNPCEKNWKTLIP-- 415 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~-----~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d----~~~~~~~~~~~li~-- 415 (783)
++++.. .....+. .+.... .. .|+|||+.++...++.....+|+.+| +.++. .+.+++
T Consensus 231 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~---~~~~~~~~ 301 (719)
T 1z68_A 231 TTYPAY------VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD---CPKTQEHI 301 (719)
T ss_dssp SSCHHH------HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE---CCGGGEEE
T ss_pred CCCCCc------cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc---eEEEEecc
Confidence 987410 0001111 111111 12 59999654444445555567899999 76654 233442
Q ss_pred --CCCCceE-----EEEEEeeCCEEEE-EEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEec--C
Q psy2521 416 --EDENRTL-----DVVAAVANNKLIV-HYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTS--F 485 (783)
Q Consensus 416 --~~~~~~l-----~~~~~~~g~~l~~-~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss--~ 485 (783)
.....+- ...++.+|+.|++ ....++..+|+++++.+++ .+.++.....+..+... +++.+++..+. -
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~ 379 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEE 379 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGG
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCC
Confidence 1111111 2345566666666 4667888899999996555 46676544444444444 77788876643 0
Q ss_pred -CCCceEEEEeC
Q psy2521 486 -LQPGTIYHCNI 496 (783)
Q Consensus 486 -~~P~~vy~~d~ 496 (783)
..-..+|.+++
T Consensus 380 ~~~~~~l~~~~~ 391 (719)
T 1z68_A 380 YPGRRNIYRISI 391 (719)
T ss_dssp CTTCBEEEEEEC
T ss_pred CCceEEEEEEeC
Confidence 12246788877
|
| >3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A | Back alignment and structure |
|---|
Probab=99.58 E-value=6.6e-15 Score=169.77 Aligned_cols=140 Identities=11% Similarity=0.021 Sum_probs=108.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
..+.+.+++.||.+|.+.++.|++ .++.|+||+.||...... ...|......+++++||+|+.+|+||.|+.+..+
T Consensus 8 ~~~~v~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~ 84 (587)
T 3i2k_A 8 VASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF 84 (587)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EEEEEEEECCCCCEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcc
Confidence 356789999999999999999976 357899999876422211 1112111104455679999999999988776544
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc-chhhh
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA-LDMLR 674 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~-~d~~~ 674 (783)
.. .....+|+.++++||.++.+.+ .||+++|+||||++++.++.++|+.++|+|+.++. .|+..
T Consensus 85 ~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~ 149 (587)
T 3i2k_A 85 VP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRA 149 (587)
T ss_dssp CT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCC
T ss_pred cc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccc
Confidence 32 2357899999999999887766 79999999999999999999999999999999998 87754
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.58 E-value=4.5e-12 Score=138.36 Aligned_cols=289 Identities=13% Similarity=0.109 Sum_probs=180.2
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..++|||||++|+++.... ..|+++|+.+++.+...........++|+|||+.|+++...
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~----~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------------- 136 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMAS----STLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG-------------- 136 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT--------------
T ss_pred CccceEECCCCCEEEEEECCC----CEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC--------------
Confidence 367899999999998875432 46999999999876543333334689999999999887621
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...|+++++.+... ...+.... ....+.|+|||++|++.... ...|+++|+.++. ....+..
T Consensus 137 -~~~v~~~d~~~~~~--~~~~~~~~---~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~---------~~~~~~~ 198 (391)
T 1l0q_A 137 -DKTVSVINTVTKAV--INTVSVGR---SPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS---------VIDTVKV 198 (391)
T ss_dssp -TTEEEEEETTTTEE--EEEEECCS---SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---------EEEEEEC
T ss_pred -CCEEEEEECCCCcE--EEEEecCC---CcceEEECCCCCEEEEEeCC---CCEEEEEECCCCe---------EEEEEec
Confidence 34789999876532 22333222 22578899999998765432 3689999998731 1112221
Q ss_pred ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 370 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 370 ~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
...... .|+++|+.|++.... ..+..|..+|+.++. ....++.. .......+..+++.|++....+ ..|.+|
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~---~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d--~~v~v~ 271 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNK---ITARIPVG-PDPAGIAVTPDGKKVYVALSFX--NTVSVI 271 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTE---EEEEEECC-SSEEEEEECTTSSEEEEEETTT--TEEEEE
T ss_pred CCCccceEECCCCCEEEEEecC-cCCCcEEEEECCCCe---EEEEEecC-CCccEEEEccCCCEEEEEcCCC--CEEEEE
Confidence 111122 589999988876542 235679999987754 23344433 2333333444545677776555 478999
Q ss_pred ECCCCceeeeecCCCeE------E-----------EeeeccccccEEE----EEEecCCCCceEEEEeCCCCcCCCCCCc
Q psy2521 449 DLNTGKRLHSFPLDLGQ------I-----------THISGRRKYNEVF----YGFTSFLQPGTIYHCNIPENITDQDDFK 507 (783)
Q Consensus 449 dl~~G~~~~~l~~~~g~------v-----------~~~s~~~d~~~l~----~~~ss~~~P~~vy~~d~~~~~~~tg~~~ 507 (783)
|+.+|+.+..+...... + ..++.+....... +.+.+.......+.+|+ .+| .
T Consensus 272 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~-----~~g--~ 344 (391)
T 1l0q_A 272 DTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDF-----GDG--S 344 (391)
T ss_dssp ETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEEC-----SSS--C
T ss_pred ECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEEC-----CCC--c
Confidence 99888876666433111 1 1122221111111 33456666778999998 455 3
Q ss_pred eEEEeeccCCCCCCCCCeEEEEEEECCCC--cEEEEEEEEecCc
Q psy2521 508 PTIFRETIVPEFEPTLFQTKQVYFRSKDG--TRVPMYIIHRVGA 549 (783)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~v~~~~~~p~~~ 549 (783)
......+. ..|.+...-..++++++.+| +++++..+++++.
T Consensus 345 ~~~~~~~~-~~~~~~g~y~~~~~~~~~~g~~~~~~~~~v~~~~~ 387 (391)
T 1l0q_A 345 SSKKQNPT-HTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGS 387 (391)
T ss_dssp EECSSSCE-ECCSSCEEEEEEEEEEETTEEEEEEEEEEEECTTS
T ss_pred ccCcCCCe-EEeCCCceEEEEEEEECCCCcEEEEEEEEEEcCCC
Confidence 32221111 14667777788899999999 6889988887653
|
| >2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=146.69 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=121.5
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEEecCcCC-CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIHRVGALR-NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~-~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
..+.++...++.. +.+++|++... .++.|+||++||+.+... .|. .....|+++||.|+++|+||++
T Consensus 21 g~~~v~~~~~~~~------~~~~~p~~~~~~g~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~~s~--- 88 (258)
T 2fx5_A 21 GPYTVSSQSEGPS------CRIYRPRDLGQGGVRHPVILWGNGTGAGPS--TYA-GLLSHWASHGFVVAAAETSNAG--- 88 (258)
T ss_dssp CSCCEEEEEETTT------EEEEEESSTTGGGCCEEEEEEECCTTCCGG--GGH-HHHHHHHHHTCEEEEECCSCCT---
T ss_pred CCcceeeeeccCc------EEEEeCCCCcccCCCceEEEEECCCCCCch--hHH-HHHHHHHhCCeEEEEecCCCCc---
Confidence 3454555444332 77788875311 237899999999876442 233 3445566679999999999641
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHc---------CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINK---------KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
...|+..+++++.+. ..+++++++++|||+||.+++.++ .++.++++++..|...
T Consensus 89 --------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~ 152 (258)
T 2fx5_A 89 --------------TGREMLACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTL 152 (258)
T ss_dssp --------------TSHHHHHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCS
T ss_pred --------------cHHHHHHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccc
Confidence 123556666666542 245778999999999999998887 3567889888776432
Q ss_pred hhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHH-HHHHHHHHHhhhCC
Q psy2521 672 MLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLH-SYKFIATLQEKIGS 750 (783)
Q Consensus 672 ~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~-~~~~~~~L~~~~~~ 750 (783)
.. +...+ .+.+ +..| +|+++|++|..+++.. +.+++++ .
T Consensus 153 ~~-----------------~~~~~---------~~~~-------i~~P-~lii~G~~D~~~~~~~~~~~~~~~---~--- 192 (258)
T 2fx5_A 153 GL-----------------GHDSA---------SQRR-------QQGP-MFLMSGGGDTIAFPYLNAQPVYRR---A--- 192 (258)
T ss_dssp ST-----------------TCCGG---------GGGC-------CSSC-EEEEEETTCSSSCHHHHTHHHHHH---C---
T ss_pred cc-----------------ccchh---------hhcc-------CCCC-EEEEEcCCCcccCchhhHHHHHhc---c---
Confidence 10 00000 1122 4455 9999999999999986 7766655 3
Q ss_pred CCCCCCcEEEEEeCCCCccCCcc
Q psy2521 751 LPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 751 ~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+.+.++.+++++||.+...
T Consensus 193 ----~~~~~~~~~~g~~H~~~~~ 211 (258)
T 2fx5_A 193 ----NVPVFWGERRYVSHFEPVG 211 (258)
T ss_dssp ----SSCEEEEEESSCCTTSSTT
T ss_pred ----CCCeEEEEECCCCCccccc
Confidence 4578999999999998653
|
| >3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.5e-14 Score=149.48 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=89.5
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.++.+....+ ++.|+||++||..+.... |.. ....|.++||.|+++|+||.|.... . .....
T Consensus 11 ~~g~~l~~~~~g~------~~~~~vv~~hG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~G~G~s~~---~---~~~~~ 75 (286)
T 3qit_A 11 FGGNQICLCSWGS------PEHPVVLCIHGILEQGLA--WQE-VALPLAAQGYRVVAPDLFGHGRSSH---L---EMVTS 75 (286)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCGGG--GHH-HHHHHHHTTCEEEEECCTTSTTSCC---C---SSGGG
T ss_pred cCCceEEEeecCC------CCCCEEEEECCCCcccch--HHH-HHHHhhhcCeEEEEECCCCCCCCCC---C---CCCCC
Confidence 4888888876632 346899999998776543 443 3455666799999999999554321 1 11123
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 672 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~ 672 (783)
..++++.+.+..+++. .+.+++.++|||+||++++.++.++|+.++++|+..|....
T Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp CSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred cCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 4567777777776665 34468999999999999999999999999999999886553
|
| >2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-14 Score=138.03 Aligned_cols=158 Identities=15% Similarity=0.136 Sum_probs=112.4
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
++.|+||++||..+....+.+. .+...|+++||.|+.+|+||.|... . ........+++.++++++.+..
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~---~----~~~~~~~~~~~~~~~~~~~~~~-- 71 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVT-ALAEVAERLGWTHERPDFTDLDARR---D----LGQLGDVRGRLQRLLEIARAAT-- 71 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHH-HHHHHHHHTTCEEECCCCHHHHTCG---G----GCTTCCHHHHHHHHHHHHHHHH--
T ss_pred CCCcEEEEEeCCCCCccHHHHH-HHHHHHHHCCCEEEEeCCCCCCCCC---C----CCCCCCHHHHHHHHHHHHHhcC--
Confidence 4579999999987654332222 3456666679999999999944321 1 1112233445556677776653
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 712 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~ 712 (783)
+.++++++|+|+||.++..++.++| ++++|+..|..+...+ +. +..
T Consensus 72 ~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~---------------~~----------------~~~- 117 (176)
T 2qjw_A 72 EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL---------------PA----------------LDA- 117 (176)
T ss_dssp TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB---------------CC----------------CCC-
T ss_pred CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc---------------Cc----------------ccc-
Confidence 4579999999999999999999998 8999998887654211 00 222
Q ss_pred CCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 713 ~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+..| +|+++|++|..|++.++.++++.+ . .++.++ ++||.+.
T Consensus 118 ---~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-~-----------~~~~~~-~~~H~~~ 159 (176)
T 2qjw_A 118 ---AAVP-ISIVHAWHDELIPAADVIAWAQAR-S-----------ARLLLV-DDGHRLG 159 (176)
T ss_dssp ---CSSC-EEEEEETTCSSSCHHHHHHHHHHH-T-----------CEEEEE-SSCTTCT
T ss_pred ---cCCC-EEEEEcCCCCccCHHHHHHHHHhC-C-----------ceEEEe-CCCcccc
Confidence 4555 999999999999999999888876 2 257777 8999985
|
| >2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=7.6e-15 Score=161.23 Aligned_cols=137 Identities=13% Similarity=0.072 Sum_probs=92.1
Q ss_pred EEECCCCcEEEEEEEEecC---cCCCCCccEEEEecCCCCCccCCcCcHHHHHHHH----cCCE---EEEEecCCCCCCC
Q psy2521 530 YFRSKDGTRVPMYIIHRVG---ALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLR----HFNG---IYAIPNIRGGGEL 599 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~---~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~----~~G~---~v~~~~~RG~g~~ 599 (783)
++.+.||.++.+..+.|.+ ..+.++.|+||++||..+.... |.... ..|. +.|| .|+++|+|| +
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~~--~~~~~-~~L~~~~~~~G~~~~~vi~~D~~G---~ 97 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKVV--WEYYL-PRLVAADAEGNYAIDKVLLIDQVN---H 97 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGGG--GGGGG-GGSCCCBTTTTEEEEEEEEECCTT---S
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHHH--HHHHH-HHHHHhhhhcCcceeEEEEEcCCC---C
Confidence 3557899999999988765 2223556899999998766543 33332 3344 3489 999999999 5
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHc--C--CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINK--K--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 672 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~--~--~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~ 672 (783)
|.+-............+.+....+..+++. + -+++.++.|+|||+||.+++.++.++|++++++|+..|....
T Consensus 98 G~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 174 (398)
T 2y6u_A 98 GDSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVIT 174 (398)
T ss_dssp HHHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSC
T ss_pred CCCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccc
Confidence 544332111011223444444443333332 1 144556999999999999999999999999999999887654
|
| >3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4e-14 Score=146.49 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=79.1
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++++.||.++.+... +..|.||++||..+.... |.... ..|.++||.|+++|+||.|.....
T Consensus 2 ~~~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~--w~~~~-~~l~~~g~~vi~~D~~G~G~S~~~------- 63 (271)
T 3ia2_A 2 TFVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDADM--WEYQM-EYLSSRGYRTIAFDRRGFGRSDQP------- 63 (271)
T ss_dssp EEECTTSCEEEEEEE--------SSSSEEEEECCTTCCGGG--GHHHH-HHHHTTTCEEEEECCTTSTTSCCC-------
T ss_pred eEEcCCCCEEEEEcc--------CCCCeEEEECCCCCcHHH--HHHHH-HHHHhCCceEEEecCCCCccCCCC-------
Confidence 467789998876543 234678999998766543 44433 445556999999999996543311
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc-CCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~-~p~lf~a~i~~~~~ 669 (783)
.....++++.+.+..+++. .+.+++.++|||+||++++.++.+ .|+..+++|...+.
T Consensus 64 -~~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~ 121 (271)
T 3ia2_A 64 -WTGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAV 121 (271)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccC
Confidence 1223455555544444443 234689999999999866655544 58999999887654
|
| >2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.55 E-value=5.8e-14 Score=151.95 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=127.5
Q ss_pred CccEEEEecCCCCCccCC-----------cCcHHHH--HHHHcCCEEEEEecCCC--CCCCChhHHhhc--c---ccCCc
Q psy2521 554 RNPVIIYGYGGYGVSVLP-----------TFSISRC--MFLRHFNGIYAIPNIRG--GGELGEDWHNAG--R---LLKKQ 613 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~-----------~~~~~~~--~~l~~~G~~v~~~~~RG--~g~~G~~~~~~g--~---~~~~~ 613 (783)
..|+||++||..+..... .|..... ..|.+.||.|+++|+|| .|..+..-.... . .....
T Consensus 45 ~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s~~~~~~~~~~~~~~~~~~~ 124 (366)
T 2pl5_A 45 KNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSSGPLSIHPETSTPYGSRFPF 124 (366)
T ss_dssp SCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSSSTTSBCTTTSSBCGGGSCC
T ss_pred CCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCCCCCCCCCCCCccccCCCCc
Confidence 368999999987766521 3333211 12324699999999999 554432100000 0 00012
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcE-EEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc------------c---
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------------K--- 677 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri-~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~------------~--- 677 (783)
..++|+.+.+..+++. ...+++ .|+|||+||.+++.++.++|++++++|+..|........ .
T Consensus 125 ~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (366)
T 2pl5_A 125 VSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAEHSAMQIAFNEVGRQAILSDPN 202 (366)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSBCCHHHHHHHHHHHHHHHTSTT
T ss_pred ccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCccCCCccchhhHHHHHHHHhCcc
Confidence 4678888887777765 345688 899999999999999999999999999988865431100 0
Q ss_pred -----c--------------------cccccchhhhCCC---------------------------CCHHH----HHHHH
Q psy2521 678 -----F--------------------TIAYYSESEFGSP---------------------------NNKTH----FHNLL 701 (783)
Q Consensus 678 -----~--------------------~~~~~~~~~~g~p---------------------------~~~~~----~~~~~ 701 (783)
+ .....+...+... ..... +..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (366)
T 2pl5_A 203 WKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQGESFVDRFDANSYIYVTKALD 282 (366)
T ss_dssp CGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGSTTCCSSSCCCHHHHHHHHHHHH
T ss_pred cccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHHHHhhhcccChhHHHHHHhhhh
Confidence 0 0000010111100 01111 12222
Q ss_pred hcCccc------CCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEe-CCCCccCCccc
Q psy2521 702 SYSPLH------NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE-QDAGHGQGKAL 774 (783)
Q Consensus 702 ~~sp~~------~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~-~~~gHg~~~~~ 774 (783)
.+.... .+.. +++| +|+++|.+|..|++..+.++++.+... +...++.++ +++||......
T Consensus 283 ~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~gH~~~~e~ 350 (366)
T 2pl5_A 283 HYSLGKGKELTAALSN----ATCR-FLVVSYSSDWLYPPAQSREIVKSLEAA-------DKRVFYVELQSGEGHDSFLLK 350 (366)
T ss_dssp HCBCCSHHHHHHHHTT----CCSE-EEEEEETTCCSSCHHHHHHHHHHHHHT-------TCCEEEEEECCCBSSGGGGSC
T ss_pred hhccccccchhhhhcc----CCCC-EEEEecCCCcccCHHHHHHHHHHhhhc-------ccCeEEEEeCCCCCcchhhcC
Confidence 222111 2233 5667 999999999999999999999999865 556788999 89999875433
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.6e-12 Score=134.84 Aligned_cols=258 Identities=10% Similarity=0.015 Sum_probs=160.5
Q ss_pred eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-Cccccccccc--ccc
Q psy2521 181 HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVLKN--VKF 257 (783)
Q Consensus 181 ~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~~~~~~--~~~ 257 (783)
...|++.+..+++.+.++... ..+..++|||||++|++..+ ..|+++|+++ ++........ ...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP-------ELFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICN 87 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES-------SCCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBC
T ss_pred ceeEEEEeCCCCceeeeccCC-------cceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccc
Confidence 456666665555555555432 12568999999999999742 3799999999 8765433221 234
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
..++|+|||+.|++...+. ....+||.+++.+... ..+. ... . ...+.|||||++|++....
T Consensus 88 ~~~~~spdg~~l~~~~~~~------------~~~~~l~~~~~~~~~~--~~~~-~~~-~--~~~~~~spdg~~l~~~~~~ 149 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVE------------FGKSAIYLLPSTGGTP--RLMT-KNL-P--SYWHGWSPDGKSFTYCGIR 149 (297)
T ss_dssp SCCEECTTSSEEEEEECTT------------TSSCEEEEEETTCCCC--EECC-SSS-S--EEEEEECTTSSEEEEEEEE
T ss_pred cceEECCCCCEEEEEEeCC------------CCcceEEEEECCCCce--EEee-cCC-C--ccceEECCCCCEEEEEECC
Confidence 6799999999999988321 1345788888765432 1222 111 1 3567999999999987654
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 416 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~ 416 (783)
. ....||.+++.++. ...+........ ..|+|+|+.|++.+..+. ..+|+.+++.+.. ...+...
T Consensus 150 ~-~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~~i~~~~~~~~~---~~~~~~~ 215 (297)
T 2ojh_A 150 D-QVFDIYSMDIDSGV---------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG-QMQIWRVRVDGSS---VERITDS 215 (297)
T ss_dssp T-TEEEEEEEETTTCC---------EEECCCSSSCEEEEEECTTSSEEEEEECTTS-SCEEEEEETTSSC---EEECCCC
T ss_pred C-CceEEEEEECCCCc---------ceEcccCCCccccceECCCCCEEEEEecCCC-CccEEEECCCCCC---cEEEecC
Confidence 2 23688888887631 122222212122 259999999998776443 5679999876544 3444333
Q ss_pred CCCceEEEEEEeeCCEEEEEEecC--------CeeEEEEEECCCCceeeeec--CCCeEEEeeeccccccEEEEEEec
Q psy2521 417 DENRTLDVVAAVANNKLIVHYIQN--------VRSVMDLHDLNTGKRLHSFP--LDLGQITHISGRRKYNEVFYGFTS 484 (783)
Q Consensus 417 ~~~~~l~~~~~~~g~~l~~~~~~~--------g~~~l~~~dl~~G~~~~~l~--~~~g~v~~~s~~~d~~~l~~~~ss 484 (783)
. .......+..+++.|++..... +...|++||+.+++...... ...+.+..+.++++++.+++....
T Consensus 216 ~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 216 A-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp S-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred C-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 2 2233333445656777766654 34789999997665422222 223345567788998888766543
|
| >4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.7e-14 Score=144.89 Aligned_cols=208 Identities=15% Similarity=0.144 Sum_probs=125.0
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc--CCEEEEEecCCC------
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRG------ 595 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG------ 595 (783)
+..+.+.+.+. .+...++.|+. ...++||++||..+...+ |.. ....+.. .++.++.|+-.-
T Consensus 13 ~~~~~~~~~~~---~l~y~ii~P~~----~~~~~VI~LHG~G~~~~d--l~~-l~~~l~~~~~~~~~i~P~Ap~~~~~~~ 82 (246)
T 4f21_A 13 LGTENLYFQSN---AMNYELMEPAK----QARFCVIWLHGLGADGHD--FVD-IVNYFDVSLDEIRFIFPHADIIPVTIN 82 (246)
T ss_dssp ----------C---CCCEEEECCSS----CCCEEEEEEEC--CCCCC--GGG-GGGGCCSCCTTEEEEEECGGGSCTTTH
T ss_pred cccceEEEecC---CcCceEeCCCC----cCCeEEEEEcCCCCCHHH--HHH-HHHHhhhcCCCeEEEeCCCCccccccC
Confidence 34556666653 35667787764 456789999995433322 211 1122221 268888887421
Q ss_pred CCCCChhHHhhcccc-------CCcChHHHHHHHHHHHHH---cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 596 GGELGEDWHNAGRLL-------KKQNCFDDFQAAAEYMIN---KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 596 ~g~~G~~~~~~g~~~-------~~~~~~~D~~a~~~~l~~---~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
.+..|..|+...... .....+...++.++.+++ +..++++||++.|+|+||.+++.++.++|+.|+++|+
T Consensus 83 ~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~ 162 (246)
T 4f21_A 83 MGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMA 162 (246)
T ss_dssp HHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEE
T ss_pred CCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCcccccccee
Confidence 111234555422111 011123333333433332 2348999999999999999999999999999999999
Q ss_pred cCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHH
Q psy2521 666 LVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQ 745 (783)
Q Consensus 666 ~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~ 745 (783)
.+|.+.... .+- ...++ .. ...| +|++||+.|++||+..+.++++.|+
T Consensus 163 ~sG~lp~~~------------~~~-----------~~~~~---~~-----~~~P-vl~~HG~~D~vVp~~~~~~~~~~L~ 210 (246)
T 4f21_A 163 LSTYLPAWD------------NFK-----------GKITS---IN-----KGLP-ILVCHGTDDQVLPEVLGHDLSDKLK 210 (246)
T ss_dssp ESCCCTTHH------------HHS-----------TTCCG---GG-----TTCC-EEEEEETTCSSSCHHHHHHHHHHHH
T ss_pred hhhccCccc------------ccc-----------ccccc---cc-----cCCc-hhhcccCCCCccCHHHHHHHHHHHH
Confidence 988552211 000 00000 00 2344 9999999999999999999999999
Q ss_pred hhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 746 EKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 746 ~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
+. |.++++..|++.||++...+-..+.+
T Consensus 211 ~~-------g~~v~~~~y~g~gH~i~~~~l~~~~~ 238 (246)
T 4f21_A 211 VS-------GFANEYKHYVGMQHSVCMEEIKDISN 238 (246)
T ss_dssp TT-------TCCEEEEEESSCCSSCCHHHHHHHHH
T ss_pred HC-------CCCeEEEEECCCCCccCHHHHHHHHH
Confidence 98 88999999999999987655444443
|
| >1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23 | Back alignment and structure |
|---|
Probab=99.55 E-value=4.5e-15 Score=147.27 Aligned_cols=175 Identities=12% Similarity=-0.000 Sum_probs=119.6
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH-HHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
.||.++.+..+.|++ .++.|+||++||+.+.... |... ....|+++||.|+++|+||.|... .... ...-
T Consensus 14 ~~g~~l~~~~~~p~~---~~~~~~vv~~hG~~~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~g~s~---~~~~-~~~~ 84 (210)
T 1imj_A 14 VQGQALFFREALPGS---GQARFSVLLLHGIRFSSET--WQNLGTLHRLAQAGYRAVAIDLPGLGHSK---EAAA-PAPI 84 (210)
T ss_dssp ETTEEECEEEEECSS---SCCSCEEEECCCTTCCHHH--HHHHTHHHHHHHTTCEEEEECCTTSGGGT---TSCC-SSCT
T ss_pred eCCeEEEEEEeCCCC---CCCCceEEEECCCCCccce--eecchhHHHHHHCCCeEEEecCCCCCCCC---CCCC-cchh
Confidence 389999999988864 3467999999998765542 3332 345566679999999999944322 1110 0111
Q ss_pred cChH--HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCC
Q psy2521 613 QNCF--DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 690 (783)
Q Consensus 613 ~~~~--~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~ 690 (783)
.... +|+.+.++.+ +.++++++|+|+||.+++.++.++|+.++++|+..|......
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~---------------- 142 (210)
T 1imj_A 85 GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI---------------- 142 (210)
T ss_dssp TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS----------------
T ss_pred hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc----------------
Confidence 1112 4555555554 245899999999999999999999999999999988754210
Q ss_pred CCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 691 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 691 p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.... + .. ++.| +|+++|++|. +++..+.++ +.+ ....+.+++++||.+
T Consensus 143 --~~~~---~------~~-------~~~p-~l~i~g~~D~-~~~~~~~~~-~~~-----------~~~~~~~~~~~~H~~ 190 (210)
T 1imj_A 143 --NAAN---Y------AS-------VKTP-ALIVYGDQDP-MGQTSFEHL-KQL-----------PNHRVLIMKGAGHPC 190 (210)
T ss_dssp --CHHH---H------HT-------CCSC-EEEEEETTCH-HHHHHHHHH-TTS-----------SSEEEEEETTCCTTH
T ss_pred --cchh---h------hh-------CCCC-EEEEEcCccc-CCHHHHHHH-hhC-----------CCCCEEEecCCCcch
Confidence 0111 1 12 3444 9999999999 887776555 322 246889999999986
Q ss_pred C
Q psy2521 771 G 771 (783)
Q Consensus 771 ~ 771 (783)
.
T Consensus 191 ~ 191 (210)
T 1imj_A 191 Y 191 (210)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=159.57 Aligned_cols=206 Identities=14% Similarity=0.120 Sum_probs=135.2
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEE----EEEecCCCCCCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGI----YAIPNIRGGGEL 599 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~----v~~~~~RG~g~~ 599 (783)
.++++.+.|. .|..+++.++.|++.. .+++|+|+++||+...... .+. .....|.++|++ |+.+|++|++.
T Consensus 167 ~v~~~~~~S~~~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~-~~~-~~~~~l~~~g~~~p~iVV~~d~~~~~~- 242 (403)
T 3c8d_A 167 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM-PVW-PVLTSLTHRQQLPPAVYVLIDAIDTTH- 242 (403)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTS-CCH-HHHHHHHHTTSSCSCEEEEECCCSHHH-
T ss_pred ceEEEEEEccccCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcC-cHH-HHHHHHHHcCCCCCeEEEEECCCCCcc-
Confidence 4567777764 6788999999998753 5689999999996322111 122 233444445764 99999986321
Q ss_pred ChhHHhhccccCCcChHHHHH--HHHHHHHHc-C-CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQ--AAAEYMINK-K-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~--a~~~~l~~~-~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
..... .....+.|++ +++.++.++ . .+|+++++|+|+||||++++.++.++|++|+++++.+|.+++...
T Consensus 243 ----r~~~~--~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~ 316 (403)
T 3c8d_A 243 ----RAHEL--PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 316 (403)
T ss_dssp ----HHHHS--SSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred ----ccccC--CChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCC
Confidence 11111 1122455554 466777654 2 358899999999999999999999999999999999998764321
Q ss_pred ccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC
Q psy2521 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 755 (783)
Q Consensus 676 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 755 (783)
+.+......+.+.. .+ ... .. |+++|.||..|+.+ +.++.+++++|++. |
T Consensus 317 -------------~~~~~~~~~~~~~~-~~---~~~----~~-~~i~l~~G~~D~~~-~~~~~~l~~~L~~~-------G 366 (403)
T 3c8d_A 317 -------------GGQQEGVLLEKLKA-GE---VSA----EG-LRIVLEAGIREPMI-MRANQALYAQLHPI-------K 366 (403)
T ss_dssp -------------TSSSCCHHHHHHHT-TS---SCC----CS-CEEEEEEESSCHHH-HHHHHHHHHHTGGG-------T
T ss_pred -------------CCCcHHHHHHHHHh-cc---ccC----CC-ceEEEEeeCCCchh-HHHHHHHHHHHHhC-------C
Confidence 11111111222221 11 111 23 34999999998754 67899999999998 8
Q ss_pred CcEEEEEeCCCCccCC
Q psy2521 756 NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 756 ~~~~l~~~~~~gHg~~ 771 (783)
.++++.++++ ||.+.
T Consensus 367 ~~v~~~~~~G-gH~~~ 381 (403)
T 3c8d_A 367 ESIFWRQVDG-GHDAL 381 (403)
T ss_dssp TSEEEEEESC-CSCHH
T ss_pred CCEEEEEeCC-CCCHH
Confidence 9999999999 79863
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-13 Score=148.57 Aligned_cols=297 Identities=7% Similarity=-0.027 Sum_probs=176.2
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEE
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHI 239 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v 239 (783)
...++++|.+++|....++ ...||+.+..+++.+.+..... .....+.|||||++|+|..... +|++
T Consensus 40 ~~~~SpdG~~l~~~~~~~g--~~~l~~~d~~~~~~~~l~~~~~------~~~~~~~~spdg~~l~~~~~~~-----~l~~ 106 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDG--NRNYYLLNLETQQAVQLTEGKG------DNTFGGFISTDERAFFYVKNEL-----NLMK 106 (396)
T ss_dssp SCCBCTTSCEEEEEECTTS--SCEEEEEETTTTEEEECCCSSC------BCTTTCEECTTSSEEEEEETTT-----EEEE
T ss_pred cCcCCCCCCEEEEEEecCC--CceEEEEECCCCcEEEeecCCC------CccccceECCCCCEEEEEEcCC-----cEEE
Confidence 3567789999999887643 3467887765555444443221 1112378999999999987542 6999
Q ss_pred EECCCCccccccccccccCeeEEeeCCCEEEEEEeecC--------CCCCCCCcc------cccCCceEEEEEcCCCCCC
Q psy2521 240 KDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDI--------NGTADGTET------TAHMGQKIYYHVLGTEQDK 305 (783)
Q Consensus 240 ~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~--------~~~~~g~~~------~~~~~~~v~~~~lgt~~~~ 305 (783)
+|+++|+......... .|+|||+.|+|...... .-..++... .......|+++++.++.
T Consensus 107 ~d~~~~~~~~~~~~~~-----~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~-- 179 (396)
T 3c5m_A 107 VDLETLEEQVIYTVDE-----EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE-- 179 (396)
T ss_dssp EETTTCCEEEEEECCT-----TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--
T ss_pred EECCCCCcEEEEeccc-----ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--
Confidence 9999987654332211 18888888877532100 000001000 00234579999987653
Q ss_pred ceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCC--CcEEEEEECCCCCCCcccCCCCceeeecCc-c--ceeEEEEe
Q psy2521 306 DIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIPGM-D--HHHEIIAN 379 (783)
Q Consensus 306 d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~--~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~-~--~~~~~~s~ 379 (783)
...+.... .....+.||| ||++|++....... ..+||++|++++. ...+.... . .....|+|
T Consensus 180 ~~~~~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~---------~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 180 LEVIHQDT---AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN---------VRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp EEEEEEES---SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC---------CEESSCCCTTEEEEEEEECT
T ss_pred EEeeccCC---cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc---------eeEeeccCCCccccceEECC
Confidence 23344322 2346789999 89999887643211 1689999997731 22233211 1 11126999
Q ss_pred eCCEEEEEECCCC-CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEe-------------cCCeeE
Q psy2521 380 NGPELIVKTTKNA-PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYI-------------QNVRSV 444 (783)
Q Consensus 380 dg~~l~~~t~~~~-~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~-------------~~g~~~ 444 (783)
||++|++.++.++ ....|+.+|+.++. .+.+.... ... ..+.. +++.+++... .++...
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~---~~~l~~~~-~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLE---NEEVMVMP-PCS--HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCC---EEEEEECC-SEE--EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCC---eEEeeeCC-CCC--CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 9999998876533 23459999998765 33343222 222 34555 6554444321 234578
Q ss_pred EEEEECCCCceeeeecCCCe-----------EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLG-----------QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g-----------~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+++|+.+|+. +.++.... ....+.++++++.+++..+. ..+..+|.+|+
T Consensus 322 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~ 382 (396)
T 3c5m_A 322 LYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDF-EGVPAIYIADV 382 (396)
T ss_dssp EEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEEC
T ss_pred EEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecC-CCCceEEEEEE
Confidence 99999976654 44543222 12345667888888876544 44668999998
|
| >3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.4e-14 Score=147.56 Aligned_cols=208 Identities=12% Similarity=0.068 Sum_probs=128.1
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++..... ++.|+||++||..+.... |.. ....|++ ||.|+++|+||.|..... .....
T Consensus 10 ~~~~~~~y~~~--------g~~~~vv~~HG~~~~~~~--~~~-~~~~L~~-~~~vi~~d~~G~G~s~~~------~~~~~ 71 (278)
T 3oos_A 10 TPRGKFEYFLK--------GEGPPLCVTHLYSEYNDN--GNT-FANPFTD-HYSVYLVNLKGCGNSDSA------KNDSE 71 (278)
T ss_dssp ETTEEEEEEEE--------CSSSEEEECCSSEECCTT--CCT-TTGGGGG-TSEEEEECCTTSTTSCCC------SSGGG
T ss_pred cCCceEEEEec--------CCCCeEEEEcCCCcchHH--HHH-HHHHhhc-CceEEEEcCCCCCCCCCC------CCccc
Confidence 35666654421 245789999998766554 322 2345665 999999999995543211 11122
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc----cc-------c
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT----IA-------Y 682 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~----~~-------~ 682 (783)
..++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|+.++++|+..|........... .. .
T Consensus 72 ~~~~~~~~~~~~~~~~--l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (278)
T 3oos_A 72 YSMTETIKDLEAIREA--LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIV 149 (278)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHH
T ss_pred CcHHHHHHHHHHHHHH--hCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHH
Confidence 3467777777666665 344689999999999999999999999999999999877611000000 00 0
Q ss_pred cchhh--------------------------------hCCCCC----HHHHHHHH-----hcCcccCCCCCCCCCcCCcE
Q psy2521 683 YSESE--------------------------------FGSPNN----KTHFHNLL-----SYSPLHNIKVPPNNTQYPAT 721 (783)
Q Consensus 683 ~~~~~--------------------------------~g~p~~----~~~~~~~~-----~~sp~~~v~~~~~~~~~P~~ 721 (783)
.+... +..+.. ...+..+. .++....+.. +++| +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~ 224 (278)
T 3oos_A 150 SIMNALNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKF----VKIP-S 224 (278)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTT----CCSC-E
T ss_pred HHHHhhcccccCchHHHHHHHHHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhC----CCCC-E
Confidence 00000 011100 01111111 1111122232 5667 9
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 722 LVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 722 Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
|+++|++|..+++..+.++++.+. ..++.+++++||.........
T Consensus 225 l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~~p~~ 269 (278)
T 3oos_A 225 FIYCGKHDVQCPYIFSCEIANLIP-----------NATLTKFEESNHNPFVEEIDK 269 (278)
T ss_dssp EEEEETTCSSSCHHHHHHHHHHST-----------TEEEEEETTCSSCHHHHSHHH
T ss_pred EEEEeccCCCCCHHHHHHHHhhCC-----------CcEEEEcCCcCCCcccccHHH
Confidence 999999999999988888777653 247899999999875433333
|
| >3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.6e-14 Score=142.14 Aligned_cols=197 Identities=14% Similarity=0.082 Sum_probs=126.3
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++.+.||.++.....- +.|+||++||+.+.... |. .....|+ .||.|+.+|+||.|.....
T Consensus 6 ~~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~-~~~~~l~-~~~~vi~~d~~G~G~S~~~------- 66 (262)
T 3r0v_A 6 TVPSSDGTPIAFERSG--------SGPPVVLVGGALSTRAG--GA-PLAERLA-PHFTVICYDRRGRGDSGDT------- 66 (262)
T ss_dssp EEECTTSCEEEEEEEE--------CSSEEEEECCTTCCGGG--GH-HHHHHHT-TTSEEEEECCTTSTTCCCC-------
T ss_pred eEEcCCCcEEEEEEcC--------CCCcEEEECCCCcChHH--HH-HHHHHHh-cCcEEEEEecCCCcCCCCC-------
Confidence 3567899888765532 24789999998776643 43 3456676 6999999999996543311
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc-----------
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF----------- 678 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~----------- 678 (783)
....++|+.+.+..+++. .+ +++.++|+|+||.+++.++.++| .++++|+..|..........
T Consensus 67 --~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 140 (262)
T 3r0v_A 67 --PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLDA 140 (262)
T ss_dssp --SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHHH
Confidence 134566777666666654 23 69999999999999999999999 99999998886543211100
Q ss_pred --cc------cccchhh-hCCCCCHHHHHHHHhc------------------------CcccCCCCCCCCCcCCcEEEEe
Q psy2521 679 --TI------AYYSESE-FGSPNNKTHFHNLLSY------------------------SPLHNIKVPPNNTQYPATLVLT 725 (783)
Q Consensus 679 --~~------~~~~~~~-~g~p~~~~~~~~~~~~------------------------sp~~~v~~~~~~~~~P~~Li~~ 725 (783)
.. ...+... .+.+ ++..+.+... .+...++. +++| +|+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~ 213 (262)
T 3r0v_A 141 LLAEGRRGDAVTYFMTEGVGVP--PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFAS----ISIP-TLVMD 213 (262)
T ss_dssp HHHTTCHHHHHHHHHHHTSCCC--HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTT----CCSC-EEEEE
T ss_pred HhhccchhhHHHHHhhcccCCC--HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCc----CCCC-EEEEe
Confidence 00 0000011 1111 1111111110 01122222 5677 99999
Q ss_pred cCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 726 GDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 726 g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
|++|..+++..+.++++.+.. .++.+++++||.
T Consensus 214 G~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~gH~ 246 (262)
T 3r0v_A 214 GGASPAWIRHTAQELADTIPN-----------ARYVTLENQTHT 246 (262)
T ss_dssp CTTCCHHHHHHHHHHHHHSTT-----------EEEEECCCSSSS
T ss_pred ecCCCCCCHHHHHHHHHhCCC-----------CeEEEecCCCcc
Confidence 999999998888777765532 478999999993
|
| >3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=150.05 Aligned_cols=200 Identities=13% Similarity=0.054 Sum_probs=125.8
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|..+..... ++.|+||++||+.+.... |. .....|++ ||.|+++|+||.|... .....
T Consensus 55 ~~~~~~~~~~~--------g~~p~vv~lhG~~~~~~~--~~-~~~~~L~~-~~~v~~~D~~G~G~S~--------~~~~~ 114 (314)
T 3kxp_A 55 IGRITLNVREK--------GSGPLMLFFHGITSNSAV--FE-PLMIRLSD-RFTTIAVDQRGHGLSD--------KPETG 114 (314)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCCGGG--GH-HHHHTTTT-TSEEEEECCTTSTTSC--------CCSSC
T ss_pred ECCEEEEEEec--------CCCCEEEEECCCCCCHHH--HH-HHHHHHHc-CCeEEEEeCCCcCCCC--------CCCCC
Confidence 46777766543 236899999998765542 43 34456765 8999999999955432 12233
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-------------ccc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-------------FTI 680 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-------------~~~ 680 (783)
..++|+.+.+..+++. .+.++++++|+|+||.+++.++.++|+.++++|+..|...+..... +..
T Consensus 115 ~~~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (314)
T 3kxp_A 115 YEANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFED 192 (314)
T ss_dssp CSHHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSS
T ss_pred CCHHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcC
Confidence 4567777777666654 2336999999999999999999999999999999877543321100 000
Q ss_pred c----ccchhhhCCCCCHHHHHHHHhc---------------------------CcccCCCCCCCCCcCCcEEEEecCCC
Q psy2521 681 A----YYSESEFGSPNNKTHFHNLLSY---------------------------SPLHNIKVPPNNTQYPATLVLTGDHD 729 (783)
Q Consensus 681 ~----~~~~~~~g~p~~~~~~~~~~~~---------------------------sp~~~v~~~~~~~~~P~~Li~~g~~D 729 (783)
. ..+...+.. ...+....+... +....++. +++| +|+++|++|
T Consensus 193 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~Lii~G~~D 266 (314)
T 3kxp_A 193 IKAVEAYLAGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRD----VTKP-VLIVRGESS 266 (314)
T ss_dssp HHHHHHHHHHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHH----CCSC-EEEEEETTC
T ss_pred HHHHHHHHHhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhc----CCCC-EEEEecCCC
Confidence 0 000000000 111111111100 11111222 5666 999999999
Q ss_pred CCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 730 DRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 730 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
..+++..+.++++.+... ++.+++++||.+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~-----------~~~~~~g~gH~~~~ 298 (314)
T 3kxp_A 267 KLVSAAALAKTSRLRPDL-----------PVVVVPGADHYVNE 298 (314)
T ss_dssp SSSCHHHHHHHHHHCTTS-----------CEEEETTCCSCHHH
T ss_pred ccCCHHHHHHHHHhCCCc-----------eEEEcCCCCCcchh
Confidence 999999888887766433 68889999998743
|
| >2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-13 Score=134.78 Aligned_cols=171 Identities=15% Similarity=0.037 Sum_probs=113.4
Q ss_pred CccEEEEecCCCCCcc-CCcCcHHHHHHHHcC-CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 554 RNPVIIYGYGGYGVSV-LPTFSISRCMFLRHF-NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
+.|+||++||+.+... ...|.......|+++ ||.|+++|+||.+.. ++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~~------------------~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPITA------------------RESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTTC------------------CHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCcc------------------cHHHHHHHHHHHhC
Confidence 5689999999877642 233444345667766 999999999983210 22333444444321
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhh-hCCCCCHHHHHHHHhcCcccCCC
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESE-FGSPNNKTHFHNLLSYSPLHNIK 710 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~-~g~p~~~~~~~~~~~~sp~~~v~ 710 (783)
. .+++.++|+|+||++++.++.++| ++++|+..|......... ..... +..+... +.+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~~---~~~~--------- 124 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-----ERASGYFTRPWQW---EKIK--------- 124 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-----HHHTSTTSSCCCH---HHHH---------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-----hHHHhhhcccccH---HHHH---------
Confidence 2 379999999999999999999999 899999888764321100 00011 1122211 1111
Q ss_pred CCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 711 ~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
. .. +|+|+++|++|..||+.++.++++.+ .. .+.+++++||.+.......++
T Consensus 125 ~----~~-~p~lii~G~~D~~vp~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~~~p~~~~ 176 (194)
T 2qs9_A 125 A----NC-PYIVQFGSTDDPFLPWKEQQEVADRL-ET-----------KLHKFTDCGHFQNTEFHELIT 176 (194)
T ss_dssp H----HC-SEEEEEEETTCSSSCHHHHHHHHHHH-TC-----------EEEEESSCTTSCSSCCHHHHH
T ss_pred h----hC-CCEEEEEeCCCCcCCHHHHHHHHHhc-CC-----------eEEEeCCCCCccchhCHHHHH
Confidence 1 12 24999999999999999999888887 33 688899999998655444444
|
| >3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.6e-14 Score=154.59 Aligned_cols=183 Identities=13% Similarity=0.129 Sum_probs=120.7
Q ss_pred CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC--------------h
Q psy2521 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG--------------E 601 (783)
Q Consensus 536 g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G--------------~ 601 (783)
...+|.....|.. ..++.|+||++||+.+.... |. .+...|+++||+|+++|+||+|... .
T Consensus 81 ~~~~p~~~~~P~~--~~~~~P~Vv~~HG~~~~~~~--~~-~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~ 155 (383)
T 3d59_A 81 SMTTPANWNSPLR--PGEKYPLVVFSHGLGAFRTL--YS-AIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDK 155 (383)
T ss_dssp TCEESSEETCCBC--CSSCEEEEEEECCTTCCTTT--TH-HHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCC
T ss_pred ceeeccccCCCcc--cCCCCCEEEEcCCCCCCchH--HH-HHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCc
Confidence 4556655444432 24588999999998766543 33 3456667789999999999976432 1
Q ss_pred hHHhh----cc------ccCCcChHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEeChhHHHHHH
Q psy2521 602 DWHNA----GR------LLKKQNCFDDFQAAAEYMIN--------------------KKYTKPKYITIMGGSNGGLLVGA 651 (783)
Q Consensus 602 ~~~~~----g~------~~~~~~~~~D~~a~~~~l~~--------------------~~~~d~~ri~i~G~S~GG~l~~~ 651 (783)
.|... +. ........+|+.+++++|.+ .+.+|++||+++|||+||.+++.
T Consensus 156 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~ 235 (383)
T 3d59_A 156 SWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQ 235 (383)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHH
T ss_pred eeeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHH
Confidence 11100 00 00001125788999999876 45678899999999999999999
Q ss_pred HHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCC
Q psy2521 652 CLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDR 731 (783)
Q Consensus 652 ~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~ 731 (783)
++.+.| .++++|+..|... |...+ .+.+ ++.| +|++||++|..
T Consensus 236 ~a~~~~-~v~a~v~~~~~~~-------------------p~~~~---------~~~~-------i~~P-~Lii~g~~D~~ 278 (383)
T 3d59_A 236 TLSEDQ-RFRCGIALDAWMF-------------------PLGDE---------VYSR-------IPQP-LFFINSEYFQY 278 (383)
T ss_dssp HHHHCT-TCCEEEEESCCCT-------------------TCCGG---------GGGS-------CCSC-EEEEEETTTCC
T ss_pred HHhhCC-CccEEEEeCCccC-------------------CCchh---------hhcc-------CCCC-EEEEecccccc
Confidence 988766 5899998877431 11111 1123 3444 99999999974
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 732 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 732 V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
+ . ..+..++|.+. +.+.++.++++++|++
T Consensus 279 ~--~-~~~~~~~l~~~-------~~~~~~~~~~g~~H~~ 307 (383)
T 3d59_A 279 P--A-NIIKMKKCYSP-------DKERKMITIRGSVHQN 307 (383)
T ss_dssp H--H-HHHHHHTTCCT-------TSCEEEEEETTCCGGG
T ss_pred h--h-hHHHHHHHHhc-------CCceEEEEeCCCcCCC
Confidence 3 2 22333445444 6789999999999996
|
| >3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.2e-14 Score=140.79 Aligned_cols=185 Identities=12% Similarity=0.070 Sum_probs=119.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHH-----
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI----- 627 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~----- 627 (783)
++.|+||++||..+....+ . . ...|. +||.|+.+|+||.|... ......++++...+..++
T Consensus 14 ~~~~~vv~~hG~~~~~~~~--~-~-~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~ 79 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKIF--G-E-LEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEV 79 (245)
T ss_dssp TCSCEEEEECCTTCCGGGG--T-T-GGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEEEeCCcccHHHH--H-H-HHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhh
Confidence 3578999999987766543 3 2 23344 59999999999955432 112234666666666555
Q ss_pred -HcCCCCCCcEEEEEeChhHHHHHHHHhc-CCCceeEEEEcCCcchhhhcccc-------ccc-------------ccch
Q psy2521 628 -NKKYTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGALDMLRFNKF-------TIA-------------YYSE 685 (783)
Q Consensus 628 -~~~~~d~~ri~i~G~S~GG~l~~~~~~~-~p~lf~a~i~~~~~~d~~~~~~~-------~~~-------------~~~~ 685 (783)
+. .. ++.++|+|+||.++..++.+ +|+ ++++|+..|..+....... ... ..+.
T Consensus 80 ~~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T 3e0x_A 80 TKH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLS 154 (245)
T ss_dssp TTT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHH
T ss_pred Hhh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHH
Confidence 33 33 99999999999999999999 999 9999999987765211100 000 0000
Q ss_pred hhh-CC-CCCHH----HHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 686 SEF-GS-PNNKT----HFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 686 ~~~-g~-p~~~~----~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
..+ .. ...+. .+..+..++....+.. ++.| +|+++|++|..|++..+.++++.+. ..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~ 218 (245)
T 3e0x_A 155 EKYFETLEKDPDIMINDLIACKLIDLVDNLKN----IDIP-VKAIVAKDELLTLVEYSEIIKKEVE-----------NSE 218 (245)
T ss_dssp HHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHSS-----------SEE
T ss_pred HHHHHHHhcCcHHHHHHHHHhccccHHHHHHh----CCCC-EEEEEeCCCCCCCHHHHHHHHHHcC-----------Cce
Confidence 011 00 00111 1122223333333443 5666 9999999999999998877776653 257
Q ss_pred EEEeCCCCccCCc
Q psy2521 760 LRVEQDAGHGQGK 772 (783)
Q Consensus 760 l~~~~~~gHg~~~ 772 (783)
+.+++++||.+..
T Consensus 219 ~~~~~~~gH~~~~ 231 (245)
T 3e0x_A 219 LKIFETGKHFLLV 231 (245)
T ss_dssp EEEESSCGGGHHH
T ss_pred EEEeCCCCcceEE
Confidence 8999999998643
|
| >1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.52 E-value=7e-13 Score=137.28 Aligned_cols=118 Identities=13% Similarity=0.073 Sum_probs=80.8
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||.++.+... +..|.||++||..+.... |.... ..|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~--------g~g~~vvllHG~~~~~~~--w~~~~-~~l~~~g~~vi~~D~~G~G~S~~~-------- 63 (274)
T 1a8q_A 3 CTTRDGVEIFYKDW--------GQGRPVVFIHGWPLNGDA--WQDQL-KAVVDAGYRGIAHDRRGHGHSTPV-------- 63 (274)
T ss_dssp EECTTSCEEEEEEE--------CSSSEEEEECCTTCCGGG--GHHHH-HHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EEccCCCEEEEEec--------CCCceEEEECCCcchHHH--HHHHH-HHHHhCCCeEEEEcCCCCCCCCCC--------
Confidence 56778988765432 234789999998765543 44433 445556999999999996543311
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGA 669 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~ 669 (783)
.....++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |+.++++|+..+.
T Consensus 64 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (274)
T 1a8q_A 64 WDGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCC
Confidence 1123455665555555544 2346899999999999998866665 9999999887753
|
| >3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A | Back alignment and structure |
|---|
Probab=99.51 E-value=4.2e-13 Score=150.35 Aligned_cols=124 Identities=12% Similarity=-0.030 Sum_probs=85.6
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
.++.+.+.||.++..... +..|+||++||+.+.... |... ...|+++||.|+++|+||.|....
T Consensus 4 i~~~~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~~~~--~~~l-~~~La~~Gy~Vi~~D~rG~G~S~~----- 67 (456)
T 3vdx_A 4 ITVGQENSTSIDLYYEDH--------GTGVPVVLIHGFPLSGHS--WERQ-SAALLDAGYRVITYDRRGFGQSSQ----- 67 (456)
T ss_dssp EEEEEETTEEEEEEEEEE--------SSSEEEEEECCTTCCGGG--GTTH-HHHHHHHTEEEEEECCTTSTTSCC-----
T ss_pred EeecccccCCeEEEEEEe--------CCCCEEEEECCCCCcHHH--HHHH-HHHHHHCCcEEEEECCCCCCCCCC-----
Confidence 445566788888774432 245899999998776544 4443 345544699999999999654331
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCcch
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGALD 671 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~~d 671 (783)
......++|+.+.+..+++. ++.+++.++|+|+||.+++.++.++ |+.++++|+..|...
T Consensus 68 ---~~~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~ 128 (456)
T 3vdx_A 68 ---PTTGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEP 128 (456)
T ss_dssp ---CSSCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCS
T ss_pred ---CCCCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCccc
Confidence 11223455555544444443 2456899999999999888887776 999999999998664
|
| >3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=149.84 Aligned_cols=141 Identities=13% Similarity=0.068 Sum_probs=88.2
Q ss_pred EEEEEECCCCcEEEEEEEEecC-cCCCCCccEEEEecCCCCCccC----------Cc-CcHHH--HHHHHcCCEEEEEec
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVG-ALRNRRNPVIIYGYGGYGVSVL----------PT-FSISR--CMFLRHFNGIYAIPN 592 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~-~~~~~~~P~ll~~hGg~~~~~~----------~~-~~~~~--~~~l~~~G~~v~~~~ 592 (783)
+...++..+|..+...|.+... .....+.|+||++||..+.+.. .. |.... ...|...||.|+++|
T Consensus 13 ~~~~~~~~~g~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D 92 (377)
T 3i1i_A 13 ILKEYTFENGRTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTD 92 (377)
T ss_dssp EEEEEECTTSCEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEEC
T ss_pred eecceeecCCCEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEec
Confidence 3445677788777434433321 1112346999999998777544 11 22111 022334699999999
Q ss_pred CCCCCC--------CChhHHhh--cc---ccCCcChHHHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCC
Q psy2521 593 IRGGGE--------LGEDWHNA--GR---LLKKQNCFDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPE 658 (783)
Q Consensus 593 ~RG~g~--------~G~~~~~~--g~---~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~ 658 (783)
+||.|. .|..-... +. .......++|+.+.+..+++. ...+++. |+|||+||.+++.++.++|+
T Consensus 93 ~~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~ 170 (377)
T 3i1i_A 93 NLCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPH 170 (377)
T ss_dssp CTTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTT
T ss_pred ccccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChH
Confidence 997542 12110000 00 001134678888888888765 3445785 99999999999999999999
Q ss_pred ceeEEEE-cCCc
Q psy2521 659 LYGAALI-LVGA 669 (783)
Q Consensus 659 lf~a~i~-~~~~ 669 (783)
+++++|+ ..+.
T Consensus 171 ~v~~lvl~~~~~ 182 (377)
T 3i1i_A 171 MVERMIGVITNP 182 (377)
T ss_dssp TBSEEEEESCCS
T ss_pred HHHHhcccCcCC
Confidence 9999998 5443
|
| >2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A | Back alignment and structure |
|---|
Probab=99.51 E-value=9.7e-14 Score=142.26 Aligned_cols=206 Identities=16% Similarity=0.145 Sum_probs=119.1
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.....- ++ .|.||++||..+... ..|... ...|.++||.|+++|+||.|..... . .....
T Consensus 9 ~~g~~l~~~~~g------~~-~~~vvllHG~~~~~~-~~~~~~-~~~l~~~g~~vi~~D~~G~G~S~~~---~--~~~~~ 74 (254)
T 2ocg_A 9 VNGVQLHYQQTG------EG-DHAVLLLPGMLGSGE-TDFGPQ-LKNLNKKLFTVVAWDPRGYGHSRPP---D--RDFPA 74 (254)
T ss_dssp ETTEEEEEEEEE------CC-SEEEEEECCTTCCHH-HHCHHH-HHHSCTTTEEEEEECCTTSTTCCSS---C--CCCCT
T ss_pred ECCEEEEEEEec------CC-CCeEEEECCCCCCCc-cchHHH-HHHHhhCCCeEEEECCCCCCCCCCC---C--CCCCh
Confidence 378777654432 12 367999999766511 224443 3556667999999999996543211 0 01111
Q ss_pred ChH-HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh-----cccccccccch--
Q psy2521 614 NCF-DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR-----FNKFTIAYYSE-- 685 (783)
Q Consensus 614 ~~~-~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~-----~~~~~~~~~~~-- 685 (783)
..+ +|..++++++.+.+ .+++.++|||+||.+++.++.++|++++++|+..|...+.. +........|.
T Consensus 75 ~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (254)
T 2ocg_A 75 DFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSER 151 (254)
T ss_dssp THHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHH
T ss_pred HHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHH
Confidence 113 33444455554433 46899999999999999999999999999998776421110 00000000110
Q ss_pred ------hhhCCCCCHH----HHHHHHhcC-------cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 686 ------SEFGSPNNKT----HFHNLLSYS-------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 686 ------~~~g~p~~~~----~~~~~~~~s-------p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
..++...... ..+.+.... ....++. +++| +|+++|++|..+++..+.++++.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~-- 224 (254)
T 2ocg_A 152 TRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPR----VQCP-ALIVHGEKDPLVPRFHADFIHKHVKG-- 224 (254)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGG----CCSC-EEEEEETTCSSSCHHHHHHHHHHSTT--
T ss_pred hHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhc----ccCC-EEEEecCCCccCCHHHHHHHHHhCCC--
Confidence 0111100000 001111110 0112222 6777 99999999999999888777665532
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.++.+++++||....
T Consensus 225 ---------~~~~~~~~~gH~~~~ 239 (254)
T 2ocg_A 225 ---------SRLHLMPEGKHNLHL 239 (254)
T ss_dssp ---------CEEEEETTCCTTHHH
T ss_pred ---------CEEEEcCCCCCchhh
Confidence 368889999998753
|
| >1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.51 E-value=3.7e-13 Score=139.33 Aligned_cols=117 Identities=17% Similarity=0.174 Sum_probs=80.3
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||.++..... +..|+||++||..+.... |.... ..|.++||.|+++|+||.|.... .
T Consensus 3 ~~~~~g~~l~y~~~--------g~~~~vvllHG~~~~~~~--~~~~~-~~L~~~g~~vi~~D~~G~G~S~~--------~ 63 (273)
T 1a8s_A 3 FTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNADS--WESQM-IFLAAQGYRVIAHDRRGHGRSSQ--------P 63 (273)
T ss_dssp EECTTSCEEEEEEE--------SCSSEEEEECCTTCCGGG--GHHHH-HHHHHTTCEEEEECCTTSTTSCC--------C
T ss_pred EecCCCcEEEEEEc--------CCCCEEEEECCCCCcHHH--HhhHH-hhHhhCCcEEEEECCCCCCCCCC--------C
Confidence 56788988765432 234789999998765543 44433 44555699999999999654321 1
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCC
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVG 668 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~ 668 (783)
.....++++.+.+..+++. .+.+++.|+|||+||.+++.++.++ |++++++|...+
T Consensus 64 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~ 120 (273)
T 1a8s_A 64 WSGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISA 120 (273)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESC
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEcc
Confidence 1223456665555555544 3446899999999999998866555 999999988765
|
| >1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=148.39 Aligned_cols=184 Identities=14% Similarity=0.038 Sum_probs=122.4
Q ss_pred EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH------HHHHHHHcCCEEEEEecCCCCCCCChhHHhhc----
Q psy2521 538 RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI------SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG---- 607 (783)
Q Consensus 538 ~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~------~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g---- 607 (783)
.+.+.++.|.+ .+.|.||++||+...... |.. .+...|.++||.|+++|+||.|..+..-....
T Consensus 49 ~~~~~~~~p~~----~~~~~vvl~HG~g~~~~~--~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~ 122 (328)
T 1qlw_A 49 QMYVRYQIPQR----AKRYPITLIHGCCLTGMT--WETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL 122 (328)
T ss_dssp CEEEEEEEETT----CCSSCEEEECCTTCCGGG--GSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT
T ss_pred eEEEEEEccCC----CCCccEEEEeCCCCCCCc--cccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCcccccccc
Confidence 35555566654 234779999998655432 331 24455556799999999999665442211000
Q ss_pred ------------------------cc-cC---------CcChHHH------------------HHHHHHHHHHcCCCCCC
Q psy2521 608 ------------------------RL-LK---------KQNCFDD------------------FQAAAEYMINKKYTKPK 635 (783)
Q Consensus 608 ------------------------~~-~~---------~~~~~~D------------------~~a~~~~l~~~~~~d~~ 635 (783)
.. .+ -...+++ +.+++..++++ + +
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~--~ 198 (328)
T 1qlw_A 123 GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIK--L--D 198 (328)
T ss_dssp TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHH--H--T
T ss_pred cccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHH--h--C
Confidence 00 00 0001333 55556666554 1 2
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCC
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNN 715 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~ 715 (783)
++.++|||+||.+++.++.++|++++++|+..|... ... ..+.. .
T Consensus 199 ~~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~--------------------~~~------------~~~~~---~ 243 (328)
T 1qlw_A 199 GTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC--------------------PKP------------EDVKP---L 243 (328)
T ss_dssp SEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC--------------------CCG------------GGCGG---G
T ss_pred CceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC--------------------CCH------------HHHhh---c
Confidence 899999999999999999999999999999887530 000 01111 0
Q ss_pred CcCCcEEEEecCCCCCCCc-----HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCC-----ccCCccc
Q psy2521 716 TQYPATLVLTGDHDDRVPP-----LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAG-----HGQGKAL 774 (783)
Q Consensus 716 ~~~P~~Li~~g~~D~~V~~-----~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~g-----Hg~~~~~ 774 (783)
.+.| +|+++|++|..+++ .++.++++.+++. |.++++.+++++| |.+....
T Consensus 244 ~~~P-vLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~-------g~~~~~~~~~~~gi~G~~H~~~~~~ 304 (328)
T 1qlw_A 244 TSIP-VLVVFGDHIEEFPRWAPRLKACHAFIDALNAA-------GGKGQLMSLPALGVHGNSHMMMQDR 304 (328)
T ss_dssp TTSC-EEEEECSSCTTCTTTHHHHHHHHHHHHHHHHT-------TCCEEEEEGGGGTCCCCCTTGGGST
T ss_pred cCCC-EEEEeccCCccccchhhHHHHHHHHHHHHHHh-------CCCceEEEcCCCCcCCCcccchhcc
Confidence 2455 99999999999997 8889999999988 7889999999666 9875444
|
| >1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.8e-13 Score=140.93 Aligned_cols=116 Identities=12% Similarity=0.012 Sum_probs=78.7
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
+.||.++.+... + +.|.||++||..+.... |... ...|+++||.|+++|+||.|.... ...
T Consensus 9 ~~~g~~l~y~~~---g-----~g~pvvllHG~~~~~~~--~~~~-~~~L~~~g~~vi~~D~~G~G~S~~--------~~~ 69 (277)
T 1brt_A 9 NSTSIDLYYEDH---G-----TGQPVVLIHGFPLSGHS--WERQ-SAALLDAGYRVITYDRRGFGQSSQ--------PTT 69 (277)
T ss_dssp TTEEEEEEEEEE---C-----SSSEEEEECCTTCCGGG--GHHH-HHHHHHTTCEEEEECCTTSTTSCC--------CSS
T ss_pred cCCCcEEEEEEc---C-----CCCeEEEECCCCCcHHH--HHHH-HHHHhhCCCEEEEeCCCCCCCCCC--------CCC
Confidence 457777654432 1 23459999998766543 4443 345655699999999999554321 112
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCCc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGA 669 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~~ 669 (783)
...++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+ +++++|+..|.
T Consensus 70 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~ 125 (277)
T 1brt_A 70 GYDYDTFAADLNTVLET--LDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASL 125 (277)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CccHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCc
Confidence 23455555554444443 233589999999999999999999999 99999988764
|
| >3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1.4e-13 Score=143.81 Aligned_cols=190 Identities=16% Similarity=0.118 Sum_probs=115.8
Q ss_pred CCccEEEEecCCCCCccCCcCc-HHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFS-ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~-~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
++.|+||++||..+.... |. .....++. .||.|+++|+||. |.+-. .....++++.+.+..+++.
T Consensus 41 g~~~~vv~lHG~~~~~~~--~~~~~~~~l~~-~g~~vi~~D~~G~---G~s~~------~~~~~~~~~~~~~~~~l~~-- 106 (293)
T 3hss_A 41 GTGDPVVFIAGRGGAGRT--WHPHQVPAFLA-AGYRCITFDNRGI---GATEN------AEGFTTQTMVADTAALIET-- 106 (293)
T ss_dssp CSSEEEEEECCTTCCGGG--GTTTTHHHHHH-TTEEEEEECCTTS---GGGTT------CCSCCHHHHHHHHHHHHHH--
T ss_pred CCCCEEEEECCCCCchhh--cchhhhhhHhh-cCCeEEEEccCCC---CCCCC------cccCCHHHHHHHHHHHHHh--
Confidence 356899999998776654 33 22334444 6999999999995 42211 1123455666555555543
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-------------ccccccc------hhhh----
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-------------FTIAYYS------ESEF---- 688 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-------------~~~~~~~------~~~~---- 688 (783)
.+.+++.++|+|+||.+++.++.++|+.++++|+..|......... ......+ ...+
T Consensus 107 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (293)
T 3hss_A 107 LDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKT 186 (293)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHH
T ss_pred cCCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccc
Confidence 2346899999999999999999999999999999988653321100 0000000 0000
Q ss_pred -CC---------------CCCHHHHHHHHhc----CcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 689 -GS---------------PNNKTHFHNLLSY----SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 689 -g~---------------p~~~~~~~~~~~~----sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
.. ......+...... .....++. +.+| +|+++|+.|..+++..+.++.+.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~g~~D~~~~~~~~~~~~~~~~~-- 259 (293)
T 3hss_A 187 LNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRN----IAAP-VLVIGFADDVVTPPYLGREVADALPN-- 259 (293)
T ss_dssp HTCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTT----CCSC-EEEEEETTCSSSCHHHHHHHHHHSTT--
T ss_pred ccccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhh----CCCC-EEEEEeCCCCCCCHHHHHHHHHHCCC--
Confidence 00 0000001000000 01111222 5677 99999999999999888777766532
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
..+.+++++||....
T Consensus 260 ---------~~~~~~~~~gH~~~~ 274 (293)
T 3hss_A 260 ---------GRYLQIPDAGHLGFF 274 (293)
T ss_dssp ---------EEEEEETTCCTTHHH
T ss_pred ---------ceEEEeCCCcchHhh
Confidence 478899999998643
|
| >3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.7e-13 Score=149.24 Aligned_cols=230 Identities=10% Similarity=-0.020 Sum_probs=140.8
Q ss_pred CCeEEEEEEECCC--CcE--EEEEEEEecCcCCCCCccEEEEecCCCCCcc--CCc----------------CcHH-HHH
Q psy2521 523 LFQTKQVYFRSKD--GTR--VPMYIIHRVGALRNRRNPVIIYGYGGYGVSV--LPT----------------FSIS-RCM 579 (783)
Q Consensus 523 ~~~~~~~~~~s~d--g~~--v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~--~~~----------------~~~~-~~~ 579 (783)
.....++.|.|.| |.. +.+.++.|++. ..+.|+|.|.||-.+... .|+ +... +..
T Consensus 72 ~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 72 NAASFQLQYRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred CceEEEEEEEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 4478888888865 443 67889999874 335899999999754421 121 1111 345
Q ss_pred H-HHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC--
Q psy2521 580 F-LRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-- 656 (783)
Q Consensus 580 ~-l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-- 656 (783)
| ++ +||+|+++||+|-| ..|+..... .....|.+.++..+. +.....|++++|+|+||..+++++...
T Consensus 150 ~~l~-~G~~Vv~~Dy~G~G---~~y~~~~~~---~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~ 220 (462)
T 3guu_A 150 WALQ-QGYYVVSSDHEGFK---AAFIAGYEE---GMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAES 220 (462)
T ss_dssp HHHH-TTCEEEEECTTTTT---TCTTCHHHH---HHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCEEEEecCCCCC---CcccCCcch---hHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChh
Confidence 5 55 69999999999944 333321110 112345555554443 333347999999999999999887754
Q ss_pred --CC-ceeEEEEcCCcchhhhccccccccc---------------------chhhhCCC---------------------
Q psy2521 657 --PE-LYGAALILVGALDMLRFNKFTIAYY---------------------SESEFGSP--------------------- 691 (783)
Q Consensus 657 --p~-lf~a~i~~~~~~d~~~~~~~~~~~~---------------------~~~~~g~p--------------------- 691 (783)
|+ .+.++++..+..|+........+.. +..++-+|
T Consensus 221 yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~ 300 (462)
T 3guu_A 221 YAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVL 300 (462)
T ss_dssp HCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHH
T ss_pred hcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHH
Confidence 45 4788888888777654321000000 00000000
Q ss_pred -----------------CCHHHHHHHHhcCccc-CCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCC
Q psy2521 692 -----------------NNKTHFHNLLSYSPLH-NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 753 (783)
Q Consensus 692 -----------------~~~~~~~~~~~~sp~~-~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 753 (783)
..+...+.+.+.+.-. ....+....+.| +||+||.+|++||+.++.++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~P-vlI~hG~~D~vVP~~~s~~l~~~l~~~------ 373 (462)
T 3guu_A 301 TYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFP-RFIWHAIPDEIVPYQPAATYVKEQCAK------ 373 (462)
T ss_dssp HCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSE-EEEEEETTCSSSCHHHHHHHHHHHHHT------
T ss_pred hhccCCHHHHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCC-EEEEeCCCCCcCCHHHHHHHHHHHHHc------
Confidence 0111112222221100 000010013555 999999999999999999999999998
Q ss_pred CCCcEEEEEeCCCCccCC
Q psy2521 754 QKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 754 ~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++++|++++|+..
T Consensus 374 -G~~V~~~~y~~~~H~~~ 390 (462)
T 3guu_A 374 -GANINFSPYPIAEHLTA 390 (462)
T ss_dssp -TCEEEEEEESSCCHHHH
T ss_pred -CCCeEEEEECcCCccCc
Confidence 88999999999999864
|
| >3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=141.19 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=78.5
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
...|+||++||..+.... |... ...|.++||.|+++|+||.|..... . .....++++.+.+..+++.- .
T Consensus 10 ~~~~~vvllHG~~~~~~~--~~~~-~~~l~~~g~~v~~~D~~G~G~S~~~---~----~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAWC--WYKI-VALMRSSGHNVTALDLGASGINPKQ---A----LQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp CCCCEEEEECCTTCCGGG--GHHH-HHHHHHTTCEEEEECCTTSTTCSCC---G----GGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCeEEEECCCCCCcch--HHHH-HHHHHhcCCeEEEeccccCCCCCCc---C----CccCCHHHHHHHHHHHHHhc-C
Confidence 457899999998766543 4443 3555556999999999995543321 1 11245667776666666542 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+.+++.|+|||+||.+++.++.++|+.++++|...|..
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 116 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLM 116 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCC
Confidence 45799999999999999999999999999999887744
|
| >3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-13 Score=143.11 Aligned_cols=117 Identities=11% Similarity=0.030 Sum_probs=77.5
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
.+.+|.++.+... +..|.||++||.++.... |...... |.++||.|+++|+||.|.... ..
T Consensus 12 ~~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~--w~~~~~~-l~~~g~~vi~~D~~G~G~S~~--------~~ 72 (281)
T 3fob_A 12 ENQAPIEIYYEDH--------GTGKPVVLIHGWPLSGRS--WEYQVPA-LVEAGYRVITYDRRGFGKSSQ--------PW 72 (281)
T ss_dssp ETTEEEEEEEEEE--------SSSEEEEEECCTTCCGGG--GTTTHHH-HHHTTEEEEEECCTTSTTSCC--------CS
T ss_pred CCCCceEEEEEEC--------CCCCeEEEECCCCCcHHH--HHHHHHH-HHhCCCEEEEeCCCCCCCCCC--------Cc
Confidence 4556666654432 234678899998876654 4433434 444699999999999554331 11
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc-CCCceeEEEEcCCc
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQ-RPELYGAALILVGA 669 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~-~p~lf~a~i~~~~~ 669 (783)
....++++.+.+..+++. ...+++.|+|||+||.+++.++.+ .|++.+.+|...+.
T Consensus 73 ~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 73 EGYEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp SCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred cccCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 234566666666666654 234689999999999877665544 58999998887653
|
| >3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.4e-13 Score=139.67 Aligned_cols=210 Identities=11% Similarity=0.070 Sum_probs=126.3
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++.+.||.++.+...-+ +..|+||++||....... |.... ..|++ +|.|+++|.||.|....
T Consensus 8 ~~~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~~~~--w~~~~-~~L~~-~~~vi~~D~rG~G~S~~-------- 69 (266)
T 3om8_A 8 FLATSDGASLAYRLDGA------AEKPLLALSNSIGTTLHM--WDAQL-PALTR-HFRVLRYDARGHGASSV-------- 69 (266)
T ss_dssp EEECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGG--GGGGH-HHHHT-TCEEEEECCTTSTTSCC--------
T ss_pred EEeccCCcEEEEEecCC------CCCCEEEEeCCCccCHHH--HHHHH-HHhhc-CcEEEEEcCCCCCCCCC--------
Confidence 45678999887765422 245889999997665443 44443 55664 89999999999554331
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhh------h-c------c
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML------R-F------N 676 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~------~-~------~ 676 (783)
......++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|...+..-+. . . .
T Consensus 70 ~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 147 (266)
T 3om8_A 70 PPGPYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAE 147 (266)
T ss_dssp CCSCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccc
Confidence 11223566666666555554 233589999999999999999999999999999876532110 0 0 0
Q ss_pred ccc-----ccccch-hhh--CCCCCHHHHH----------------HHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCC
Q psy2521 677 KFT-----IAYYSE-SEF--GSPNNKTHFH----------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV 732 (783)
Q Consensus 677 ~~~-----~~~~~~-~~~--g~p~~~~~~~----------------~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V 732 (783)
... ....|. ..+ ..+...+.+. .+........+.. +++| +||++|++|..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~~P-~Lvi~G~~D~~~ 222 (266)
T 3om8_A 148 DMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLAR----IERP-TLVIAGAYDTVT 222 (266)
T ss_dssp SSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGG----CCSC-EEEEEETTCSSS
T ss_pred cHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcC----CCCC-EEEEEeCCCCCC
Confidence 000 000000 000 0111001111 1111111112222 6777 999999999999
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchh
Q psy2521 733 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDI 776 (783)
Q Consensus 733 ~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~ 776 (783)
++.++..+++.+... ++.+++ +||...-....
T Consensus 223 ~~~~~~~l~~~ip~a-----------~~~~i~-~gH~~~~e~p~ 254 (266)
T 3om8_A 223 AASHGELIAASIAGA-----------RLVTLP-AVHLSNVEFPQ 254 (266)
T ss_dssp CHHHHHHHHHHSTTC-----------EEEEES-CCSCHHHHCHH
T ss_pred CHHHHHHHHHhCCCC-----------EEEEeC-CCCCccccCHH
Confidence 999888887766543 567776 79986433333
|
| >1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.7e-15 Score=164.34 Aligned_cols=217 Identities=18% Similarity=0.102 Sum_probs=138.8
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCC---ccCCcCcHHHHHHHHcCCEEEEEecCCC-CCCCChhHHhhccccCCcC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGV---SVLPTFSISRCMFLRHFNGIYAIPNIRG-GGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~RG-~g~~G~~~~~~g~~~~~~~ 614 (783)
+.+.++.|+.. .++.|+||++|||... .....+.. ..+..+.|++|+.+|||. ..+|+..-.. .....+..
T Consensus 83 L~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~--~~la~~g~~vvv~~nYRlg~~Gf~~~~~~-~~~~~~n~ 157 (489)
T 1qe3_A 83 LYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFGFLHLSSF-DEAYSDNL 157 (489)
T ss_dssp CEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCC--HHHHHHHTCEEEEECCCCHHHHSCCCTTT-CTTSCSCH
T ss_pred CEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCH--HHHHhcCCEEEEecCccCcccccCccccc-cccCCCCc
Confidence 56667778752 3458999999998632 22222332 234443249999999994 2234321000 00122334
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchhhhccccc-ccccchhhh
Q psy2521 615 CFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKFT-IAYYSESEF 688 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~~~~~~~~-~~~~~~~~~ 688 (783)
.+.|+.++++|+.++ ...||+||+|+|+|+||++++.++... +++|+++|+.+|..++....... ....+....
T Consensus 158 gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~ 237 (489)
T 1qe3_A 158 GLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVL 237 (489)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 588999999999875 236999999999999999999888753 57999999999987443221100 011122344
Q ss_pred CCCC-CHHH------HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 689 GSPN-NKTH------FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 689 g~p~-~~~~------~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
|.+. ..+. -+.+...+++.+... ...| .+++++..|.+|.+.++.+++++++.. ++|+++-
T Consensus 238 g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~----~~~~-~~~~~p~~D~~~~~~~~~~~~~~~~~~-------~vp~~~g 305 (489)
T 1qe3_A 238 GINESQLDRLHTVAAEDLLKAADQLRIAEK----ENIF-QLFFQPALDPKTLPEEPEKSIAEGAAS-------GIPLLIG 305 (489)
T ss_dssp TCCTTCGGGGGTSCHHHHHHHHHHHHTSTT----CCTT-SCSSCCBCBTTTBCSCHHHHHHTTTTT-------TCCEEEE
T ss_pred CCCHHHHHHHHcCCHHHHHHHHHHhhhccc----cccC-CccceEeECCeecCcCHHHHHhcCCCC-------CCCEEEe
Confidence 6542 1110 112222333322111 1222 678899999999999999988887766 8999999
Q ss_pred EeCCCCccCCc
Q psy2521 762 VEQDAGHGQGK 772 (783)
Q Consensus 762 ~~~~~gHg~~~ 772 (783)
.++++||++..
T Consensus 306 ~~~~Eg~~~~~ 316 (489)
T 1qe3_A 306 TTRDEGYLFFT 316 (489)
T ss_dssp EETTGGGGTCC
T ss_pred eecchhHhhcc
Confidence 99999999865
|
| >2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.49 E-value=3.9e-13 Score=140.77 Aligned_cols=126 Identities=11% Similarity=0.052 Sum_probs=85.8
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
+..+.+.+|.++.+...-| ...|+||++||.++.... .|... ...|+ .||.|+++|+||.|..... ..
T Consensus 4 ~~~~~~~~g~~l~~~~~G~------~~~~~vvllHG~~~~~~~-~w~~~-~~~L~-~~~~vi~~Dl~G~G~S~~~--~~- 71 (286)
T 2yys_A 4 EIGYVPVGEAELYVEDVGP------VEGPALFVLHGGPGGNAY-VLREG-LQDYL-EGFRVVYFDQRGSGRSLEL--PQ- 71 (286)
T ss_dssp EEEEEECSSCEEEEEEESC------TTSCEEEEECCTTTCCSH-HHHHH-HGGGC-TTSEEEEECCTTSTTSCCC--CS-
T ss_pred ceeEEeECCEEEEEEeecC------CCCCEEEEECCCCCcchh-HHHHH-HHHhc-CCCEEEEECCCCCCCCCCC--cc-
Confidence 3344556888887665432 134789999998776541 24433 34565 5999999999995543210 00
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.....+++++.+.+..+++. ...+++.++|||+||.+++.++.++|+ ++++|+..|..
T Consensus 72 --~~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~ 129 (286)
T 2yys_A 72 --DPRLFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWV 129 (286)
T ss_dssp --CGGGCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCC
T ss_pred --CcccCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCcc
Confidence 00123566666666666554 234689999999999999999999999 99999988754
|
| >1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=8.5e-13 Score=138.81 Aligned_cols=122 Identities=11% Similarity=0.060 Sum_probs=84.9
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.++.+...-+ ...|.||++||..+... .|...+...|+++||.|+++|+||.|..... . .....
T Consensus 8 ~~g~~l~y~~~G~------~~~~~vvllHG~~~~~~--~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~--~---~~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGD------PADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTR--D---FAAHP 74 (298)
T ss_dssp ETTEEEEEEEESC------TTSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCC--C---TTTSC
T ss_pred cCCeEEEEEeccC------CCCCeEEEEcCCCCCcc--chHHHHHHHHHhCCCEEEeeCCCCCCCCCCC--C---CCcCC
Confidence 5788876654421 23478999999876654 3555454566667999999999996543310 0 01122
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
..++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+..
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 4566666666555554 234689999999999999999999999999998876543
|
| >3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.1e-13 Score=145.30 Aligned_cols=116 Identities=11% Similarity=0.082 Sum_probs=83.9
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~ 614 (783)
+|.++..... ++.|+||++||..+.... |......++. +||.|+++|+||.|.... .....
T Consensus 17 ~g~~l~~~~~--------g~~~~vv~~HG~~~~~~~--~~~~~~~l~~-~g~~v~~~d~~G~G~S~~--------~~~~~ 77 (309)
T 3u1t_A 17 EGATIAYVDE--------GSGQPVLFLHGNPTSSYL--WRNIIPYVVA-AGYRAVAPDLIGMGDSAK--------PDIEY 77 (309)
T ss_dssp TTEEEEEEEE--------ECSSEEEEECCTTCCGGG--GTTTHHHHHH-TTCEEEEECCTTSTTSCC--------CSSCC
T ss_pred CCeEEEEEEc--------CCCCEEEEECCCcchhhh--HHHHHHHHHh-CCCEEEEEccCCCCCCCC--------CCccc
Confidence 7877765543 235799999998766543 4444444465 599999999999554331 12234
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
.++|+.+.+..+++. ...+++.|+|||+||++++.++.++|+.++++|+..|...
T Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 132 (309)
T 3u1t_A 78 RLQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVP 132 (309)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCT
T ss_pred CHHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCC
Confidence 567777766666654 2346899999999999999999999999999999886543
|
| >1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12 | Back alignment and structure |
|---|
Probab=99.48 E-value=6.4e-13 Score=137.68 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=80.6
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||.++.....-| ...|+||++||..+.... |.... ..|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~~~--w~~~~-~~l~~~g~~vi~~D~~G~G~S~~~-------- 65 (275)
T 1a88_A 3 VTTSDGTNIFYKDWGP------RDGLPVVFHHGWPLSADD--WDNQM-LFFLSHGYRVIAHDRRGHGRSDQP-------- 65 (275)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGG--GHHHH-HHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EEccCCCEEEEEEcCC------CCCceEEEECCCCCchhh--HHHHH-HHHHHCCceEEEEcCCcCCCCCCC--------
Confidence 5678898887654422 134789999997665543 54433 445556999999999996543311
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGA 669 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~ 669 (783)
.....++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+.
T Consensus 66 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 66 STGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 1123455555544444443 2235899999999999998866665 9999999887753
|
| >1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31 | Back alignment and structure |
|---|
Probab=99.48 E-value=4e-13 Score=131.34 Aligned_cols=164 Identities=15% Similarity=0.046 Sum_probs=113.6
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... .|.......|+++||.|+.+|+|.++. ..++++.+.+..+++.- .
T Consensus 4 ~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~---~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL---H 64 (192)
T ss_dssp CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---C
T ss_pred CCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---c
Confidence 5889999998765541 355444445655699999999993221 13566666666555542 5
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCC--ceeEEEEcCCcchhhhcccccccccchhhh-CCCCCHHHHHHHHhcCcccCCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPE--LYGAALILVGALDMLRFNKFTIAYYSESEF-GSPNNKTHFHNLLSYSPLHNIKV 711 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~--lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~-g~p~~~~~~~~~~~~sp~~~v~~ 711 (783)
+++.++|||+||.+++.++.++|+ .++++|+..|+........ .. ..| ..|.+.+ .++.
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~-----~~-~~~~~~~~~~~------------~~~~ 126 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ-----ML-DEFTQGSFDHQ------------KIIE 126 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG-----GG-GGGTCSCCCHH------------HHHH
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccch-----hh-hhhhhcCCCHH------------HHHh
Confidence 799999999999999999999999 9999999998765432110 00 111 1122211 1111
Q ss_pred CCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 712 PPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 712 ~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+..| +|+++|++|..|++.++.++++.+ .. .+.+++++||.+..
T Consensus 127 ----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~ 170 (192)
T 1uxo_A 127 ----SAKH-RAVIASKDDQIVPFSFSKDLAQQI-DA-----------ALYEVQHGGHFLED 170 (192)
T ss_dssp ----HEEE-EEEEEETTCSSSCHHHHHHHHHHT-TC-----------EEEEETTCTTSCGG
T ss_pred ----hcCC-EEEEecCCCCcCCHHHHHHHHHhc-Cc-----------eEEEeCCCcCcccc
Confidence 3344 999999999999999988887776 33 68889999999753
|
| >3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni} | Back alignment and structure |
|---|
Probab=99.48 E-value=4.4e-14 Score=145.29 Aligned_cols=202 Identities=14% Similarity=0.060 Sum_probs=118.7
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc-CCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
+|.++..... ++.|+||++||..+.... |...... |.+ +||.|+++|+||.|... ... .
T Consensus 9 ~g~~l~y~~~--------g~~~~vv~lhG~~~~~~~--~~~~~~~-l~~~~g~~v~~~d~~G~G~s~---~~~-----~- 68 (272)
T 3fsg_A 9 TRSNISYFSI--------GSGTPIIFLHGLSLDKQS--TCLFFEP-LSNVGQYQRIYLDLPGMGNSD---PIS-----P- 68 (272)
T ss_dssp CTTCCEEEEE--------CCSSEEEEECCTTCCHHH--HHHHHTT-STTSTTSEEEEECCTTSTTCC---CCS-----S-
T ss_pred cCCeEEEEEc--------CCCCeEEEEeCCCCcHHH--HHHHHHH-HhccCceEEEEecCCCCCCCC---CCC-----C-
Confidence 6666665432 245789999998665432 3332223 443 59999999999955432 111 1
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc--------------
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-------------- 679 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~-------------- 679 (783)
..++++.+.+..+++.- .+.+++.++|||+||.+++.++.++|+.++++|+..|...........
T Consensus 69 ~~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (272)
T 3fsg_A 69 STSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPV 147 (272)
T ss_dssp CSHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCC
T ss_pred CCHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcc
Confidence 34455554444443320 134689999999999999999999999999999988875222110000
Q ss_pred ccccchhhh---CCCCCHHH-------------------HHHHHhcCcc-----cCCCCCCCCCcCCcEEEEecCCCCCC
Q psy2521 680 IAYYSESEF---GSPNNKTH-------------------FHNLLSYSPL-----HNIKVPPNNTQYPATLVLTGDHDDRV 732 (783)
Q Consensus 680 ~~~~~~~~~---g~p~~~~~-------------------~~~~~~~sp~-----~~v~~~~~~~~~P~~Li~~g~~D~~V 732 (783)
........+ .....+.. ...+.....+ ..+.. ++.| +|+++|..|..|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~l~i~g~~D~~~ 222 (272)
T 3fsg_A 148 ENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNIN----YQFP-FKIMVGRNDQVV 222 (272)
T ss_dssp TTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCC----CSSC-EEEEEETTCTTT
T ss_pred cCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhcc----CCCC-EEEEEeCCCCcC
Confidence 000000000 00000111 1111111111 01222 6777 999999999999
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 733 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 733 ~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
++..+.++.+.+. ..++.+++++||.+...
T Consensus 223 ~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~ 252 (272)
T 3fsg_A 223 GYQEQLKLINHNE-----------NGEIVLLNRTGHNLMID 252 (272)
T ss_dssp CSHHHHHHHTTCT-----------TEEEEEESSCCSSHHHH
T ss_pred CHHHHHHHHHhcC-----------CCeEEEecCCCCCchhc
Confidence 9988877765442 35889999999987543
|
| >3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=2.7e-13 Score=138.57 Aligned_cols=200 Identities=8% Similarity=-0.006 Sum_probs=120.1
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... |.... ..|+++||.|+++|+||.|..... ......++++.+.+..+++.-.. .
T Consensus 4 g~~vv~lHG~~~~~~~--~~~~~-~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l~~-~ 72 (258)
T 3dqz_A 4 KHHFVLVHNAYHGAWI--WYKLK-PLLESAGHRVTAVELAASGIDPRP-------IQAVETVDEYSKPLIETLKSLPE-N 72 (258)
T ss_dssp CCEEEEECCTTCCGGG--GTTHH-HHHHHTTCEEEEECCTTSTTCSSC-------GGGCCSHHHHHHHHHHHHHTSCT-T
T ss_pred CCcEEEECCCCCcccc--HHHHH-HHHHhCCCEEEEecCCCCcCCCCC-------CCccccHHHhHHHHHHHHHHhcc-c
Confidence 3899999998776644 44433 455557999999999995543311 11124566666666666554221 3
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc--------------c----c-------------cccc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK--------------F----T-------------IAYY 683 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~--------------~----~-------------~~~~ 683 (783)
+++.++|||+||++++.++.++|+.++++|...|......... . . ....
T Consensus 73 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (258)
T 3dqz_A 73 EEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPK 152 (258)
T ss_dssp CCEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHH
T ss_pred CceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHH
Confidence 6899999999999999999999999999998887432211000 0 0 0000
Q ss_pred ch-hhhCCCCCHHHHHHHHh-cCccc----------CCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCC
Q psy2521 684 SE-SEFGSPNNKTHFHNLLS-YSPLH----------NIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 751 (783)
Q Consensus 684 ~~-~~~g~p~~~~~~~~~~~-~sp~~----------~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 751 (783)
+. ..+......+....+.. ..+.. ...... -..+| +|+++|++|..+|+..+.++++.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~---- 226 (258)
T 3dqz_A 153 FMKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEG-YGSVQ-RVYVMSSEDKAIPCDFIRWMIDNFNVS---- 226 (258)
T ss_dssp HHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTT-GGGSC-EEEEEETTCSSSCHHHHHHHHHHSCCS----
T ss_pred HHHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccc-cccCC-EEEEECCCCeeeCHHHHHHHHHhCCcc----
Confidence 00 00111111222221111 11111 111100 13466 999999999999998887777665332
Q ss_pred CCCCCcEEEEEeCCCCccCCccchhhh
Q psy2521 752 PYQKNPLLLRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~gHg~~~~~~~~~ 778 (783)
.+.+++++||...-.....+
T Consensus 227 -------~~~~~~~~gH~~~~~~p~~~ 246 (258)
T 3dqz_A 227 -------KVYEIDGGDHMVMLSKPQKL 246 (258)
T ss_dssp -------CEEEETTCCSCHHHHSHHHH
T ss_pred -------cEEEcCCCCCchhhcChHHH
Confidence 67888999998654333333
|
| >3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A | Back alignment and structure |
|---|
Probab=99.48 E-value=9.1e-14 Score=145.21 Aligned_cols=116 Identities=15% Similarity=0.084 Sum_probs=84.5
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.++.+...-+ ...|+||++||..+.... |... ...|+ .||.|+++|+||.|.... ....
T Consensus 17 ~~g~~l~~~~~g~------~~~~~vl~lHG~~~~~~~--~~~~-~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~ 78 (299)
T 3g9x_A 17 VLGERMHYVDVGP------RDGTPVLFLHGNPTSSYL--WRNI-IPHVA-PSHRCIAPDLIGMGKSDK--------PDLD 78 (299)
T ss_dssp ETTEEEEEEEESC------SSSCCEEEECCTTCCGGG--GTTT-HHHHT-TTSCEEEECCTTSTTSCC--------CCCC
T ss_pred eCCeEEEEEecCC------CCCCEEEEECCCCccHHH--HHHH-HHHHc-cCCEEEeeCCCCCCCCCC--------CCCc
Confidence 3788887665422 235789999998776653 3333 34566 499999999999554321 1124
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~ 132 (299)
T 3g9x_A 79 YFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFI 132 (299)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEEC
T ss_pred ccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCC
Confidence 5677777777777765 34568999999999999999999999999999987743
|
| >3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.6e-13 Score=142.13 Aligned_cols=197 Identities=15% Similarity=0.098 Sum_probs=122.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+..|+||++||..+... .|.... ..|++ +|.|+++|+||.|... . .......++++.+.+..+++.-
T Consensus 13 ~~~~~vvllHG~~~~~~--~w~~~~-~~L~~-~~~vi~~Dl~G~G~S~---~----~~~~~~~~~~~a~dl~~~l~~l-- 79 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGS--YWLPQL-AVLEQ-EYQVVCYDQRGTGNNP---D----TLAEDYSIAQMAAELHQALVAA-- 79 (268)
T ss_dssp TTCCEEEEECCTTCCGG--GGHHHH-HHHHT-TSEEEECCCTTBTTBC---C----CCCTTCCHHHHHHHHHHHHHHT--
T ss_pred CCCCEEEEeCCCCccHH--HHHHHH-HHHhh-cCeEEEECCCCCCCCC---C----CccccCCHHHHHHHHHHHHHHc--
Confidence 35689999999876654 355443 55664 8999999999954322 1 1112345777777777776652
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-----------c-------------ccccccchhh-
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-----------K-------------FTIAYYSESE- 687 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-----------~-------------~~~~~~~~~~- 687 (783)
..+++.++|||+||.+++.++.++|++++++|+..+........ . +.....|...
T Consensus 80 ~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3v48_A 80 GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAAR 159 (268)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcc
Confidence 33589999999999999999999999999999887643211000 0 0000001000
Q ss_pred -----------h-CCCCCHH---HHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 688 -----------F-GSPNNKT---HFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 688 -----------~-g~p~~~~---~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
. ..+.... .+..+........++. +++| +||++|++|..+|+..+.++.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~l~~~~p~------ 228 (268)
T 3v48_A 160 APRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADR----IRCP-VQIICASDDLLVPTACSSELHAALPD------ 228 (268)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHCSS------
T ss_pred cccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhc----CCCC-eEEEEeCCCcccCHHHHHHHHHhCCc------
Confidence 0 0000000 1111222222222333 6777 99999999999999988887766543
Q ss_pred CCCCcEEEEEeCCCCccCCccchhhh
Q psy2521 753 YQKNPLLLRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg~~~~~~~~~ 778 (783)
..+.+++++||...-.....+
T Consensus 229 -----~~~~~~~~~GH~~~~e~p~~~ 249 (268)
T 3v48_A 229 -----SQKMVMPYGGHACNVTDPETF 249 (268)
T ss_dssp -----EEEEEESSCCTTHHHHCHHHH
T ss_pred -----CeEEEeCCCCcchhhcCHHHH
Confidence 378889999998654433333
|
| >1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A | Back alignment and structure |
|---|
Probab=99.47 E-value=6.8e-13 Score=137.74 Aligned_cols=120 Identities=16% Similarity=0.153 Sum_probs=80.9
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
+++.||.++.+...-| ...|+||++||..+.... |.... ..|.++||.|+++|+||.|.....
T Consensus 4 ~~~~~g~~l~y~~~g~------~~~~~vvllHG~~~~~~~--w~~~~-~~L~~~g~~vi~~D~~G~G~S~~~-------- 66 (276)
T 1zoi_A 4 VTTKDGVQIFYKDWGP------RDAPVIHFHHGWPLSADD--WDAQL-LFFLAHGYRVVAHDRRGHGRSSQV-------- 66 (276)
T ss_dssp EECTTSCEEEEEEESC------TTSCEEEEECCTTCCGGG--GHHHH-HHHHHTTCEEEEECCTTSTTSCCC--------
T ss_pred EECCCCcEEEEEecCC------CCCCeEEEECCCCcchhH--HHHHH-HHHHhCCCEEEEecCCCCCCCCCC--------
Confidence 5677898887654422 134789999998765543 54443 445556999999999996544311
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGA 669 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~ 669 (783)
.....++++.+.+..+++. .+.+++.|+|||+||.+++.++.++ |++++++|+..+.
T Consensus 67 ~~~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 67 WDGHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp SSCCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred CCCCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 1123455555444444433 2235899999999999998877666 9999999887753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.6e-13 Score=157.16 Aligned_cols=125 Identities=16% Similarity=0.105 Sum_probs=86.9
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.+..++++.||.++..... ++.|+||++||+.+.... |.... ..|.++||.|+++|+||.|.... .
T Consensus 237 ~~~~~~~~~dg~~l~~~~~--------g~~p~vv~~HG~~~~~~~--~~~~~-~~l~~~G~~v~~~D~~G~G~S~~---~ 302 (555)
T 3i28_A 237 MSHGYVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESWYS--WRYQI-PALAQAGYRVLAMDMKGYGESSA---P 302 (555)
T ss_dssp SEEEEEEEETTEEEEEEEE--------CSSSEEEEECCTTCCGGG--GTTHH-HHHHHTTCEEEEECCTTSTTSCC---C
T ss_pred cceeEEEeCCCcEEEEEEc--------CCCCEEEEEeCCCCchhH--HHHHH-HHHHhCCCEEEEecCCCCCCCCC---C
Confidence 4555666779998876543 246899999998776543 44433 44555799999999999554321 1
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
. ......++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+.++++|+..|.
T Consensus 303 ~---~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 361 (555)
T 3i28_A 303 P---EIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361 (555)
T ss_dssp S---CGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred C---CcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccC
Confidence 1 11122355555544444443 24468999999999999999999999999999987764
|
| >4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=141.75 Aligned_cols=194 Identities=11% Similarity=0.103 Sum_probs=120.3
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|+||++||..+.... |.. ....|.+ ||.|+++|+||.|....... .......++++.+.+..+++. .+
T Consensus 19 ~~p~vv~~HG~~~~~~~--~~~-~~~~l~~-g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 88 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSA--WNR-ILPFFLR-DYRVVLYDLVCAGSVNPDFF----DFRRYTTLDPYVDDLLHILDA--LG 88 (269)
T ss_dssp CSSEEEEECCTTCCGGG--GTT-TGGGGTT-TCEEEEECCTTSTTSCGGGC----CTTTCSSSHHHHHHHHHHHHH--TT
T ss_pred CCCEEEEEeCCCCcHHH--HHH-HHHHHhC-CcEEEEEcCCCCCCCCCCCC----CccccCcHHHHHHHHHHHHHh--cC
Confidence 45899999998766543 332 2355666 99999999999554432110 111222456666666666654 34
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc-----------------ccccchhhh----CCCC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-----------------IAYYSESEF----GSPN 692 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~-----------------~~~~~~~~~----g~p~ 692 (783)
.+++.++|||+||++++.++.++|+.++++|+..|........... ....|...+ ..+.
T Consensus 89 ~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
T 4dnp_A 89 IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD 168 (269)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCC
Confidence 4689999999999999999999999999999998854322110000 000011000 0111
Q ss_pred CHHHHH-------------------HHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCC
Q psy2521 693 NKTHFH-------------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 753 (783)
Q Consensus 693 ~~~~~~-------------------~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 753 (783)
..+..+ .+...+....++. ++.| +|+++|++|..+++..+.++.+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~------- 236 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGL----VKVP-CHIFQTARDHSVPASVATYLKNHLGG------- 236 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGG----CCSC-EEEEEEESBTTBCHHHHHHHHHHSSS-------
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhcc----ccCC-EEEEecCCCcccCHHHHHHHHHhCCC-------
Confidence 111111 1111222223333 5677 99999999999999888877766532
Q ss_pred CCCcEEEEEeCCCCccCCc
Q psy2521 754 QKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 754 ~~~~~~l~~~~~~gHg~~~ 772 (783)
.+++.+++++||....
T Consensus 237 ---~~~~~~~~~~gH~~~~ 252 (269)
T 4dnp_A 237 ---KNTVHWLNIEGHLPHL 252 (269)
T ss_dssp ---CEEEEEEEEESSCHHH
T ss_pred ---CceEEEeCCCCCCccc
Confidence 2688999999998653
|
| >1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A | Back alignment and structure |
|---|
Probab=99.46 E-value=3.5e-13 Score=141.05 Aligned_cols=122 Identities=17% Similarity=0.106 Sum_probs=79.0
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+...-+ ..+.|.||++||+++.+.. |...+..++ +.||.|+++|+||.|.... .. ...
T Consensus 12 ~~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~~~--~~~~~~~l~-~~g~~vi~~D~~G~G~S~~---~~----~~~ 76 (293)
T 1mtz_A 12 VNGIYIYYKLCKA-----PEEKAKLMTMHGGPGMSHD--YLLSLRDMT-KEGITVLFYDQFGCGRSEE---PD----QSK 76 (293)
T ss_dssp ETTEEEEEEEECC-----SSCSEEEEEECCTTTCCSG--GGGGGGGGG-GGTEEEEEECCTTSTTSCC---CC----GGG
T ss_pred ECCEEEEEEEECC-----CCCCCeEEEEeCCCCcchh--HHHHHHHHH-hcCcEEEEecCCCCccCCC---CC----CCc
Confidence 3677766554321 1123789999998766533 222233444 4699999999999554321 11 111
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
..++++.+.+..+++.- ...+++.|+|||+||.+++.++.++|++++++|+..|...
T Consensus 77 ~~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 77 FTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 133 (293)
T ss_dssp CSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred ccHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC
Confidence 33555555444444431 0225899999999999999999999999999999888654
|
| >2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.46 E-value=5.8e-13 Score=140.59 Aligned_cols=212 Identities=17% Similarity=0.128 Sum_probs=127.7
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.+..++.. +|.++.+... + .+..|+||++||+.+.... |... ...|++ ||.|+++|+||.|+...
T Consensus 45 ~~~~~v~~-~~~~~~~~~~---g---~~~~~~vv~lHG~~~~~~~--~~~~-~~~L~~-g~~vi~~D~~G~gG~s~---- 109 (306)
T 2r11_A 45 CKSFYIST-RFGQTHVIAS---G---PEDAPPLVLLHGALFSSTM--WYPN-IADWSS-KYRTYAVDIIGDKNKSI---- 109 (306)
T ss_dssp CEEEEECC-TTEEEEEEEE---S---CTTSCEEEEECCTTTCGGG--GTTT-HHHHHH-HSEEEEECCTTSSSSCE----
T ss_pred cceEEEec-CCceEEEEee---C---CCCCCeEEEECCCCCCHHH--HHHH-HHHHhc-CCEEEEecCCCCCCCCC----
Confidence 34555554 4446655542 1 2346899999998876644 4333 345665 99999999999622211
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc------c
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF------T 679 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~------~ 679 (783)
.......++|+.+.+..+++. .+.+++.|+|+|+||++++.++.++|++++++|+..|..+....... .
T Consensus 110 ---~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (306)
T 2r11_A 110 ---PENVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALG 184 (306)
T ss_dssp ---ECSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHT
T ss_pred ---CCCCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhH
Confidence 111234566777766666654 33468999999999999999999999999999999987764221100 0
Q ss_pred -ccccc----hhhh-CCCC-CHHHH---H-HHHh----cCccc-------------CCCCCCCCCcCCcEEEEecCCCCC
Q psy2521 680 -IAYYS----ESEF-GSPN-NKTHF---H-NLLS----YSPLH-------------NIKVPPNNTQYPATLVLTGDHDDR 731 (783)
Q Consensus 680 -~~~~~----~~~~-g~p~-~~~~~---~-~~~~----~sp~~-------------~v~~~~~~~~~P~~Li~~g~~D~~ 731 (783)
....+ ...+ +... ....+ . .... +..+. .+. .+++| +|+++|++|..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~i~~P-~lii~G~~D~~ 259 (306)
T 2r11_A 185 LTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELR----SARVP-ILLLLGEHEVI 259 (306)
T ss_dssp TTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHH----TCCSC-EEEEEETTCCS
T ss_pred HHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHh----cCCCC-EEEEEeCCCcc
Confidence 00000 0001 1110 10000 0 0000 00000 011 25667 99999999999
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 732 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 732 V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
|++.++.++++++. ...++.+++++||....
T Consensus 260 ~~~~~~~~~~~~~~----------~~~~~~~~~~~gH~~~~ 290 (306)
T 2r11_A 260 YDPHSALHRASSFV----------PDIEAEVIKNAGHVLSM 290 (306)
T ss_dssp SCHHHHHHHHHHHS----------TTCEEEEETTCCTTHHH
T ss_pred cCHHHHHHHHHHHC----------CCCEEEEeCCCCCCCcc
Confidence 99988876665432 13578999999998643
|
| >4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7.7e-14 Score=144.03 Aligned_cols=212 Identities=14% Similarity=0.132 Sum_probs=121.5
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
++.++++.+| ++.+.. . .++.|+||++||..+.... |......++. +||.|+++|+||.|.......
T Consensus 4 ~~~~~~~~~~-~~~~~~---~----~~~~~~vv~lHG~~~~~~~--~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~-- 70 (279)
T 4g9e_A 4 NYHELETSHG-RIAVRE---S----EGEGAPLLMIHGNSSSGAI--FAPQLEGEIG-KKWRVIAPDLPGHGKSTDAID-- 70 (279)
T ss_dssp EEEEEEETTE-EEEEEE---C----CCCEEEEEEECCTTCCGGG--GHHHHHSHHH-HHEEEEEECCTTSTTSCCCSC--
T ss_pred EEEEEEcCCc-eEEEEe---c----CCCCCeEEEECCCCCchhH--HHHHHhHHHh-cCCeEEeecCCCCCCCCCCCC--
Confidence 4556666666 343322 1 2456899999998765543 4444444455 599999999999654432100
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-cccc-----
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-KFTI----- 680 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-~~~~----- 680 (783)
......++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++.+.++...|........ .+..
T Consensus 71 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~ 145 (279)
T 4g9e_A 71 ---PDRSYSMEGYADAMTEVMQQ--LGIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMA 145 (279)
T ss_dssp ---HHHHSSHHHHHHHHHHHHHH--HTCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGG
T ss_pred ---cccCCCHHHHHHHHHHHHHH--hCCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhh
Confidence 11123466666666666554 234589999999999999999999999555555555433221100 0000
Q ss_pred -------c----ccch-hhhCCCCCHHHHHHHHhcCc------------------ccCCCCCCCCCcCCcEEEEecCCCC
Q psy2521 681 -------A----YYSE-SEFGSPNNKTHFHNLLSYSP------------------LHNIKVPPNNTQYPATLVLTGDHDD 730 (783)
Q Consensus 681 -------~----~~~~-~~~g~p~~~~~~~~~~~~sp------------------~~~v~~~~~~~~~P~~Li~~g~~D~ 730 (783)
. ..+. ..++.+......+.+....+ ...+.. +..| +|+++|.+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~ 220 (279)
T 4g9e_A 146 LAGQEIFSERDVESYARSTCGEPFEASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAE----AQLP-IAVVNGRDEP 220 (279)
T ss_dssp GGGCSCCCHHHHHHHHHHHHCSSCCHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHH----CCSC-EEEEEETTCS
T ss_pred hcCcccccHHHHHHHHHhhccCcccHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHh----cCCC-EEEEEcCCCc
Confidence 0 0000 11122222222222211111 001111 4566 9999999999
Q ss_pred CCCcHHHHHHH-HHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 731 RVPPLHSYKFI-ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 731 ~V~~~~~~~~~-~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.|++..+.+++ +.+. ...+.+++++||....
T Consensus 221 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~ 252 (279)
T 4g9e_A 221 FVELDFVSKVKFGNLW-----------EGKTHVIDNAGHAPFR 252 (279)
T ss_dssp SBCHHHHTTCCCSSBG-----------GGSCEEETTCCSCHHH
T ss_pred ccchHHHHHHhhccCC-----------CCeEEEECCCCcchHH
Confidence 99998776665 3222 2367889999998643
|
| >2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40 | Back alignment and structure |
|---|
Probab=99.46 E-value=3.9e-13 Score=146.18 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=77.7
Q ss_pred ccEEEEecCCCCCccCC-------cCcHHHH--HHHHcCCEEEEEecCCC--CCCCChhHHhh--cc---ccCCcChHHH
Q psy2521 555 NPVIIYGYGGYGVSVLP-------TFSISRC--MFLRHFNGIYAIPNIRG--GGELGEDWHNA--GR---LLKKQNCFDD 618 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~-------~~~~~~~--~~l~~~G~~v~~~~~RG--~g~~G~~~~~~--g~---~~~~~~~~~D 618 (783)
.|+||++||..+..... .|..... ..|+..||.|+++|+|| |+..+..-... +. .......++|
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 68999999987776541 1332211 12534699999999999 33333210000 00 0001246788
Q ss_pred HHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 619 FQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 619 ~~a~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+.+.+..+++. .+.+++. |+|+|+||.+++.++.++|++++++|+..|..
T Consensus 139 ~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 189 (377)
T 2b61_A 139 IVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSI 189 (377)
T ss_dssp HHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCS
T ss_pred HHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCc
Confidence 88888887765 3446887 99999999999999999999999999988853
|
| >2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.9e-13 Score=138.25 Aligned_cols=204 Identities=15% Similarity=0.104 Sum_probs=122.9
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+...-+. +.+.|+||++||..+.... |.... ..|++ +|.|+++|+||.|.... . ...
T Consensus 9 ~~g~~l~y~~~g~~----~~~~~~vvllHG~~~~~~~--~~~~~-~~L~~-~~~vi~~D~~G~G~S~~---~-----~~~ 72 (266)
T 2xua_A 9 VNGTELHYRIDGER----HGNAPWIVLSNSLGTDLSM--WAPQV-AALSK-HFRVLRYDTRGHGHSEA---P-----KGP 72 (266)
T ss_dssp CSSSEEEEEEESCS----SSCCCEEEEECCTTCCGGG--GGGGH-HHHHT-TSEEEEECCTTSTTSCC---C-----SSC
T ss_pred ECCEEEEEEEcCCc----cCCCCeEEEecCccCCHHH--HHHHH-HHHhc-CeEEEEecCCCCCCCCC---C-----CCC
Confidence 47888877654321 1125899999997665543 44433 45664 79999999999554321 1 122
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh------hhc---c-c--cc-c
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM------LRF---N-K--FT-I 680 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~------~~~---~-~--~~-~ 680 (783)
.+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+.... ... . . .. .
T Consensus 73 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 2xua_A 73 YTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHAL 150 (266)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHH
T ss_pred CCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHH
Confidence 4566666666555554 23358999999999999999999999999999988764321 000 0 0 00 0
Q ss_pred cccchhhhCC-------C------------CCHHHH----HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH
Q psy2521 681 AYYSESEFGS-------P------------NNKTHF----HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 737 (783)
Q Consensus 681 ~~~~~~~~g~-------p------------~~~~~~----~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~ 737 (783)
.......+-. | .....+ ..+........+.. +++| +|+++|++|..+++..+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lvi~G~~D~~~~~~~~ 225 (266)
T 2xua_A 151 ADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPG----IKVP-ALVISGTHDLAATPAQG 225 (266)
T ss_dssp HHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGG----CCSC-EEEEEETTCSSSCHHHH
T ss_pred HHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhcc----CCCC-EEEEEcCCCCcCCHHHH
Confidence 0000001100 0 001111 11112222222332 6777 99999999999999888
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 738 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 738 ~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.++++.+.. .++.+++ +||....
T Consensus 226 ~~~~~~~~~-----------~~~~~~~-~gH~~~~ 248 (266)
T 2xua_A 226 RELAQAIAG-----------ARYVELD-ASHISNI 248 (266)
T ss_dssp HHHHHHSTT-----------CEEEEES-CCSSHHH
T ss_pred HHHHHhCCC-----------CEEEEec-CCCCchh
Confidence 777665532 2688889 9998653
|
| >1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-12 Score=137.38 Aligned_cols=124 Identities=17% Similarity=0.133 Sum_probs=84.3
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
..+++..||.++.....-+ ...|.||++||+++......+ ..++...||.|+++|+||.|... ..
T Consensus 16 ~~~~~~~~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~~----~~~~~~~~~~vi~~D~~G~G~S~---~~-- 80 (317)
T 1wm1_A 16 SGWLDTGDGHRIYWELSGN------PNGKPAVFIHGGPGGGISPHH----RQLFDPERYKVLLFDQRGCGRSR---PH-- 80 (317)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECCTTTCCCCGGG----GGGSCTTTEEEEEECCTTSTTCB---ST--
T ss_pred eeEEEcCCCcEEEEEEcCC------CCCCcEEEECCCCCcccchhh----hhhccccCCeEEEECCCCCCCCC---CC--
Confidence 3456667898886554322 123668999998765432222 12343469999999999955332 11
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.......+.++.+.+..+++. .+.+++.|+|||+||.+++.++.++|++++++|+..+.
T Consensus 81 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 -ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp -TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 111234567777777777665 33468999999999999999999999999999987653
|
| >1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.5e-13 Score=137.87 Aligned_cols=191 Identities=16% Similarity=0.173 Sum_probs=110.6
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||..+.... |.. ....|+++||.|+.+|+||.|... .... ........+|+.+++++|.+.+.
T Consensus 16 ~~~vvllHG~~~~~~~--~~~-~~~~L~~~g~~vi~~D~~GhG~s~---~~~~-~~~~~~~~~d~~~~~~~l~~~~~--- 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSAD--VRM-LGRFLESKGYTCHAPIYKGHGVPP---EELV-HTGPDDWWQDVMNGYEFLKNKGY--- 85 (247)
T ss_dssp SCEEEEECCTTCCTHH--HHH-HHHHHHHTTCEEEECCCTTSSSCH---HHHT-TCCHHHHHHHHHHHHHHHHHHTC---
T ss_pred CcEEEEECCCCCChHH--HHH-HHHHHHHCCCEEEecccCCCCCCH---HHhc-CCCHHHHHHHHHHHHHHHHHcCC---
Confidence 4789999997665532 433 335565569999999999966321 1110 00111113456666777766543
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEc-CCcchh-h-hc-ccc-cccccchhhhCC---------------C-CC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALIL-VGALDM-L-RF-NKF-TIAYYSESEFGS---------------P-NN 693 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~-~~~~d~-~-~~-~~~-~~~~~~~~~~g~---------------p-~~ 693 (783)
+++.++|||+||.+++.++.++| ++++|+. .|.... . .. ..+ .....+....+. + ..
T Consensus 86 ~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (247)
T 1tqh_A 86 EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKT 163 (247)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTT
T ss_pred CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHHH
Confidence 58999999999999999999999 6666643 333210 0 00 000 000000000010 0 00
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 694 KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 694 ~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
...+..+. .+....++. +++| +|+++|++|..||+..+.++++.+.. ...++.+++++||....
T Consensus 164 ~~~~~~~~-~~~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~~---------~~~~~~~~~~~gH~~~~ 227 (247)
T 1tqh_A 164 LKALQELI-ADVRDHLDL----IYAP-TFVVQARHDEMINPDSANIIYNEIES---------PVKQIKWYEQSGHVITL 227 (247)
T ss_dssp HHHHHHHH-HHHHHTGGG----CCSC-EEEEEETTCSSSCTTHHHHHHHHCCC---------SSEEEEEETTCCSSGGG
T ss_pred HHHHHHHH-HHHHhhccc----CCCC-EEEEecCCCCCCCcchHHHHHHhcCC---------CceEEEEeCCCceeecc
Confidence 00111000 011122332 5667 99999999999999998888766532 24689999999999654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-11 Score=145.76 Aligned_cols=260 Identities=10% Similarity=-0.015 Sum_probs=159.7
Q ss_pred EeCCe-EEEEEEcCCCCeeEEEEEeCC--C-CCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-----CCceE
Q psy2521 165 RQENN-YFYFHNKGLQNHSILYVQRNL--T-GSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-----GSDWN 235 (783)
Q Consensus 165 ~~G~~-~yy~~~~~~~~~~~l~~~~~~--~-g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-----G~d~~ 235 (783)
++|++ ++|.... ...||+.+.. + ++.+.|...... .+......++|||||++|+|+.... +....
T Consensus 88 PDg~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~--~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 88 PAGGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAV--GGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp SSSSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCCS--TTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred cCCCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCccC--CCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 78998 8887533 3568888764 2 555555442100 0234577899999999999988641 13347
Q ss_pred EEEEEECCC------Ccccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCC-CC-CCc
Q psy2521 236 TLHIKDVDT------GKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-EQ-DKD 306 (783)
Q Consensus 236 ~i~v~Dl~t------g~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt-~~-~~d 306 (783)
+|+++|+++ |+...++ ........++|||||+.|+|.+.+... .......||++++.+ +. .+.
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~--------~~~~~~~i~~~d~~~~g~~~~~ 233 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPR--------MPWEGTELKTARVTEDGRFADT 233 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTC--------CTTTCEEEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCC--------CCCCCcEEEEEEECCCCccccc
Confidence 899999998 7665544 333334679999999999999854320 012345799999973 31 122
Q ss_pred eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc----------eeEE
Q psy2521 307 IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH----------HHEI 376 (783)
Q Consensus 307 ~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~----------~~~~ 376 (783)
..+..... .....+.|||||+ +++..+.. ....||++|++++. +..++..... ....
T Consensus 234 ~~l~~~~~--~~~~~~~~spdg~-l~~~~~~~-~~~~l~~~~~~~~~---------~~~l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 234 RTLLGGPE--EAIAQAEWAPDGS-LIVATDRT-GWWNLHRVDPATGA---------ATQLCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp EEEEEETT--BCEEEEEECTTSC-EEEEECTT-SSCEEEEECTTTCC---------EEESSCCSSBSSCCCCSTTCCSEE
T ss_pred EEeCCCCC--ceEcceEECCCCe-EEEEECCC-CCeEEEEEECCCCc---------eeecccccccccCccccccCceEe
Confidence 23433221 2346789999999 66665542 34689999987642 1222221110 0113
Q ss_pred EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec-CCeeEEEEEECCCCce
Q psy2521 377 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ-NVRSVMDLHDLNTGKR 455 (783)
Q Consensus 377 ~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~-~g~~~l~~~dl~~G~~ 455 (783)
++++++ +++..+. ...+|+.+|++++. .+.+..+ ...+..++..+++.+++.... +....|+++|+.+|+.
T Consensus 301 ~~~~~~-~~~~~~~--~~~~l~~~d~~~~~---~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 301 PLANGL-IAVVHGK--GAAVLGILDPESGE---LVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp ECTTSC-EEEEEBS--SSCEEEEEETTTTE---EEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EeCCCE-EEEEEEc--CccEEEEEECCCCc---EEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 556654 6666665 56689999987654 4444333 233445534555777766554 4557899999976664
Q ss_pred eeeec
Q psy2521 456 LHSFP 460 (783)
Q Consensus 456 ~~~l~ 460 (783)
+.++
T Consensus 373 -~~l~ 376 (662)
T 3azo_A 373 -RTIG 376 (662)
T ss_dssp -EEEE
T ss_pred -EEee
Confidence 4443
|
| >1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=7.2e-13 Score=137.71 Aligned_cols=116 Identities=11% Similarity=-0.016 Sum_probs=77.9
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
+.+|.++..... + ..|.||++||..+.... |.... ..|+++||.|+++|+||.|..... ..
T Consensus 9 ~~~g~~l~y~~~---g-----~~~pvvllHG~~~~~~~--~~~~~-~~L~~~g~~vi~~D~~G~G~S~~~--------~~ 69 (279)
T 1hkh_A 9 NSTPIELYYEDQ---G-----SGQPVVLIHGYPLDGHS--WERQT-RELLAQGYRVITYDRRGFGGSSKV--------NT 69 (279)
T ss_dssp TTEEEEEEEEEE---S-----SSEEEEEECCTTCCGGG--GHHHH-HHHHHTTEEEEEECCTTSTTSCCC--------SS
T ss_pred CCCCeEEEEEec---C-----CCCcEEEEcCCCchhhH--HhhhH-HHHHhCCcEEEEeCCCCCCCCCCC--------CC
Confidence 456666644322 1 23459999998765543 44433 455556999999999996543311 12
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCCc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGA 669 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~~ 669 (783)
...++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+ +++++|...++
T Consensus 70 ~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~ 125 (279)
T 1hkh_A 70 GYDYDTFAADLHTVLET--LDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASL 125 (279)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CCCHHHHHHHHHHHHHh--cCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccC
Confidence 23455555544444443 234589999999999999999999999 99999988764
|
| >2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A | Back alignment and structure |
|---|
Probab=99.44 E-value=9e-13 Score=137.93 Aligned_cols=192 Identities=14% Similarity=0.082 Sum_probs=115.2
Q ss_pred ccEEEEecCC-CCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 555 NPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 555 ~P~ll~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
.|+||++||. ++......|.......|++ +|.|+++|+||.|... .. ......++++.+.+..+++. .+
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~-~~~vi~~D~~G~G~S~---~~----~~~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDA-GYRVILKDSPGFNKSD---AV----VMDEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHT-TCEEEEECCTTSTTSC---CC----CCSSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhc-cCEEEEECCCCCCCCC---CC----CCcCcCHHHHHHHHHHHHHH--hC
Confidence 4789999997 4333222344433144565 6999999999955432 11 11134577777766666654 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhh-----------h-cccc--ccc----ccchhhh-CCC--C
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDML-----------R-FNKF--TIA----YYSESEF-GSP--N 692 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~-----------~-~~~~--~~~----~~~~~~~-g~p--~ 692 (783)
.+++.|+|||+||.+++.++.++|++++++|+..|..... . .... ... ..+...+ ..+ .
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 4689999999999999999999999999999887643110 0 0000 000 0000000 111 0
Q ss_pred CHHH--------------HHHHHh---------cCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhC
Q psy2521 693 NKTH--------------FHNLLS---------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG 749 (783)
Q Consensus 693 ~~~~--------------~~~~~~---------~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 749 (783)
..+. ...+.. +.....++. +++| +|+++|++|..+|+..+.++++.+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~~p~~~~~~~~~~~~~--- 254 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGE----IKAK-TFITWGRDDRFVPLDHGLKLLWNIDD--- 254 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHSSS---
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhh----cCCC-EEEEEECCCCccCHHHHHHHHHHCCC---
Confidence 1111 111100 011112222 6777 99999999999999888777665432
Q ss_pred CCCCCCCcEEEEEeCCCCccCCc
Q psy2521 750 SLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 750 ~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.++.+++++||...-
T Consensus 255 --------~~~~~i~~~gH~~~~ 269 (286)
T 2puj_A 255 --------ARLHVFSKCGAWAQW 269 (286)
T ss_dssp --------EEEEEESSCCSCHHH
T ss_pred --------CeEEEeCCCCCCccc
Confidence 478899999998643
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.44 E-value=2.3e-12 Score=149.14 Aligned_cols=242 Identities=7% Similarity=-0.068 Sum_probs=150.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..+++||||++|||+...+|. +.||++++|+..+.+... .....++|||| +++|+...+. ..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~----~~lw~~~~g~~~~lt~~~~~~~~~~~~spd--~~l~~~~~~~----------g~ 87 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGS----VNAYLYDGGETVKLNREPINSVLDPHYGVG--RVILVRDVSK----------GA 87 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTE----EEEEEEETTEEEECCSSCCSEECEECTTCS--EEEEEEECST----------TS
T ss_pred hheeecCCCCCeEEEEEccCCc----eeEEEEcCCCcEeeecccccccccccCCCC--eEEEEeccCC----------CC
Confidence 6788999999999999876553 444445778776655443 23468999999 6777773211 12
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+||.+++....... .+. ... . . ....|||||+.+++.+... + .+.++|+++|. ...+...
T Consensus 88 ~~~~l~~~~~~~~g~~~-~l~-~~~-~-~-~~~~~s~dg~~~~~~s~~~-~--~~~l~d~~~g~---------~~~l~~~ 150 (582)
T 3o4h_A 88 EQHALFKVNTSRPGEEQ-RLE-AVK-P-M-RILSGVDTGEAVVFTGATE-D--RVALYALDGGG---------LRELARL 150 (582)
T ss_dssp CCEEEEEEETTSTTCCE-ECT-TSC-S-B-EEEEEEECSSCEEEEEECS-S--CEEEEEEETTE---------EEEEEEE
T ss_pred cceEEEEEeccCCCccc-ccc-CCC-C-c-eeeeeCCCCCeEEEEecCC-C--CceEEEccCCc---------EEEeecC
Confidence 23468888872121221 111 111 1 2 2468999999988876543 2 33366887741 2233332
Q ss_pred ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
.. ....|||||+.|++.++.......|+.+|++++. ++.+.... .......++++|+.|+ ....++..+|++||
T Consensus 151 ~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---~~~l~~~~-~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 151 PG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---LRVFDSGE-GSFSSASISPGMKVTA-GLETAREARLVTVD 224 (582)
T ss_dssp SS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---CEEECCSS-CEEEEEEECTTSCEEE-EEECSSCEEEEEEC
T ss_pred CC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---ceEeecCC-CccccceECCCCCEEE-EccCCCeeEEEEEc
Confidence 22 2236999999999887765444679999998766 55565443 4455556667755666 66777778999999
Q ss_pred CCCCceeeeecCCCeEEEeee--------ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 450 LNTGKRLHSFPLDLGQITHIS--------GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 450 l~~G~~~~~l~~~~g~v~~~s--------~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++|+.. .++...+.+..+. +++|+ .++++.+.- .++..+++
T Consensus 225 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~---g~~~l~~~ 274 (582)
T 3o4h_A 225 PRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARRE---GRSAVFID 274 (582)
T ss_dssp TTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEET---TEEEEEET
T ss_pred CCCCcEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcC---CcEEEEEE
Confidence 9777654 4433333343444 78888 676665443 24555554
|
| >1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=3.2e-12 Score=135.09 Aligned_cols=124 Identities=16% Similarity=0.068 Sum_probs=83.9
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
..+++..||.++.+...-+ ...|.||++||+++......+ ..++...||.|+++|+||.|... ..
T Consensus 13 ~~~~~~~~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~~----~~~~~~~~~~vi~~D~~G~G~S~---~~-- 77 (313)
T 1azw_A 13 QGSLKVDDRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDKM----RRFHDPAKYRIVLFDQRGSGRST---PH-- 77 (313)
T ss_dssp EEEEECSSSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGGG----GGGSCTTTEEEEEECCTTSTTSB---ST--
T ss_pred cceEEcCCCCEEEEEecCC------CCCCeEEEECCCCCccccHHH----HHhcCcCcceEEEECCCCCcCCC---CC--
Confidence 3446667888887654322 123668999998765432222 12343469999999999955432 11
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.......++++.+.+..|++. ...+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 78 -~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 -ADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -TCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccccHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 111234567777766666654 23458999999999999999999999999999987654
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.2e-11 Score=124.06 Aligned_cols=229 Identities=8% Similarity=-0.015 Sum_probs=150.0
Q ss_pred ceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCC-CCCCceeEEe
Q psy2521 233 DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT-EQDKDIPVVE 311 (783)
Q Consensus 233 d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt-~~~~d~~v~~ 311 (783)
...+|+++|+.+++.............++|+|||+.|++.. + ..|+++++.+ ... ..+..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~---------------~~i~~~d~~~~~~~--~~~~~ 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--E---------------GLLYRLSLAGDPSP--EKVDT 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--T---------------TEEEEEESSSCCSC--EECCC
T ss_pred cceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--C---------------CeEEEEeCCCCCCc--eEecc
Confidence 34789999999998664433333346899999999999875 1 2689999876 432 22222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCC
Q psy2521 312 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKN 391 (783)
Q Consensus 312 ~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~ 391 (783)
... ......+.|||||++|++..........||.+++.++. ...+..........|+|||+.|++....+
T Consensus 81 ~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 150 (297)
T 2ojh_A 81 GFA-TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT---------PRLMTKNLPSYWHGWSPDGKSFTYCGIRD 150 (297)
T ss_dssp TTC-CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC---------CEECCSSSSEEEEEECTTSSEEEEEEEET
T ss_pred ccc-cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc---------eEEeecCCCccceEECCCCCEEEEEECCC
Confidence 221 12234689999999999887544345899999987742 12222222212225999999998876543
Q ss_pred CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeec
Q psy2521 392 APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG 471 (783)
Q Consensus 392 ~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~ 471 (783)
. ..+|+.+++.++. ...+.... .......+.++++.|++....++..+|+.+++. ++....+......+..+.+
T Consensus 151 ~-~~~l~~~~~~~~~---~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~ 224 (297)
T 2ojh_A 151 Q-VFDIYSMDIDSGV---ETRLTHGE-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD-GSSVERITDSAYGDWFPHP 224 (297)
T ss_dssp T-EEEEEEEETTTCC---EEECCCSS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-SSCEEECCCCSEEEEEEEE
T ss_pred C-ceEEEEEECCCCc---ceEcccCC-CccccceECCCCCEEEEEecCCCCccEEEECCC-CCCcEEEecCCcccCCeEE
Confidence 3 3578888887654 34444333 333334445565667777767788889999874 4445666655566777888
Q ss_pred cccccEEEEEEecCC-------CCceEEEEeC
Q psy2521 472 RRKYNEVFYGFTSFL-------QPGTIYHCNI 496 (783)
Q Consensus 472 ~~d~~~l~~~~ss~~-------~P~~vy~~d~ 496 (783)
+++++.+++...... ....++.+|+
T Consensus 225 s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 225 SPSGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp CTTSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CCCCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 999988877655422 2357999999
|
| >3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.8e-13 Score=141.39 Aligned_cols=191 Identities=11% Similarity=0.116 Sum_probs=119.7
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 635 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 635 (783)
|+||++||..+.... |.. ....|++ ||.|+++|+||.|........ ......++++.+.+..+++. .+.+
T Consensus 29 ~~vv~lHG~~~~~~~--~~~-~~~~l~~-g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~ 98 (282)
T 3qvm_A 29 KTVLLAHGFGCDQNM--WRF-MLPELEK-QFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVA--LDLV 98 (282)
T ss_dssp CEEEEECCTTCCGGG--GTT-THHHHHT-TSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHH--TTCC
T ss_pred CeEEEECCCCCCcch--HHH-HHHHHhc-CceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHH--cCCC
Confidence 899999998766543 333 3466776 999999999996544321100 01122566766666666654 2447
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc-c-----------------cccccch-----hhhCCCC
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK-F-----------------TIAYYSE-----SEFGSPN 692 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~-~-----------------~~~~~~~-----~~~g~p~ 692 (783)
++.++|||+||.+++.++.++|+.++++|+..|......... . .....|. ..++.+.
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 899999999999999999999999999999988654322100 0 0000010 0112222
Q ss_pred CHHHHHHH-------------------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCC
Q psy2521 693 NKTHFHNL-------------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 753 (783)
Q Consensus 693 ~~~~~~~~-------------------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 753 (783)
.++..+.+ ........+.. +..| +|+++|++|..+++..+.++.+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~-------- 245 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLED----ISTP-ALIFQSAKDSLASPEVGQYMAENIP-------- 245 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGG----CCSC-EEEEEEEECTTCCHHHHHHHHHHSS--------
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhc----CCCC-eEEEEeCCCCcCCHHHHHHHHHhCC--------
Confidence 22111111 11111122232 5666 9999999999999988877766553
Q ss_pred CCCcEEEEEeCCCCccCCc
Q psy2521 754 QKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 754 ~~~~~~l~~~~~~gHg~~~ 772 (783)
...+.+++++||.+..
T Consensus 246 ---~~~~~~~~~~gH~~~~ 261 (282)
T 3qvm_A 246 ---NSQLELIQAEGHCLHM 261 (282)
T ss_dssp ---SEEEEEEEEESSCHHH
T ss_pred ---CCcEEEecCCCCcccc
Confidence 2478999999998643
|
| >1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.3e-13 Score=138.76 Aligned_cols=208 Identities=15% Similarity=0.114 Sum_probs=120.0
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCC-CCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
...+|.++.+... + +...|+||++||. ++......|.... ..|++ +|.|+++|+||.|.... . .
T Consensus 12 ~~~~g~~l~y~~~---g---~~g~p~vvllHG~~~~~~~~~~~~~~~-~~L~~-~~~vi~~D~~G~G~S~~---~----~ 76 (285)
T 1c4x_A 12 FPSGTLASHALVA---G---DPQSPAVVLLHGAGPGAHAASNWRPII-PDLAE-NFFVVAPDLIGFGQSEY---P----E 76 (285)
T ss_dssp ECCTTSCEEEEEE---S---CTTSCEEEEECCCSTTCCHHHHHGGGH-HHHHT-TSEEEEECCTTSTTSCC---C----S
T ss_pred EEECCEEEEEEec---C---CCCCCEEEEEeCCCCCCcchhhHHHHH-HHHhh-CcEEEEecCCCCCCCCC---C----C
Confidence 3457877765432 1 0124679999996 3333223344433 45664 69999999999554321 1 1
Q ss_pred CCcChHHHH----HHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh--------cccc
Q psy2521 611 KKQNCFDDF----QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR--------FNKF 678 (783)
Q Consensus 611 ~~~~~~~D~----~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~--------~~~~ 678 (783)
.....++++ .+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..|...... ....
T Consensus 77 ~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 1c4x_A 77 TYPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 154 (285)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred CcccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHH
Confidence 112345555 5554444443 1236899999999999999999999999999998877532100 0000
Q ss_pred ccccc------chhh-hCCCC-C---HH-------------HHHHHHh-c----C-------cccCCCCCCCCCcCCcEE
Q psy2521 679 TIAYY------SESE-FGSPN-N---KT-------------HFHNLLS-Y----S-------PLHNIKVPPNNTQYPATL 722 (783)
Q Consensus 679 ~~~~~------~~~~-~g~p~-~---~~-------------~~~~~~~-~----s-------p~~~v~~~~~~~~~P~~L 722 (783)
..... +... +..+. . .+ ....+.. + . +...++. +++| +|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~l 229 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGR----LPHD-VL 229 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTT----CCSC-EE
T ss_pred hccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhcc----CCCC-EE
Confidence 00000 0000 01111 0 01 0110100 0 0 0011222 6777 99
Q ss_pred EEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 723 VLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 723 i~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+++|++|..||+..+.++++.+. ..++.+++++||...-
T Consensus 230 ii~G~~D~~~p~~~~~~~~~~~~-----------~~~~~~i~~~gH~~~~ 268 (285)
T 1c4x_A 230 VFHGRQDRIVPLDTSLYLTKHLK-----------HAELVVLDRCGHWAQL 268 (285)
T ss_dssp EEEETTCSSSCTHHHHHHHHHCS-----------SEEEEEESSCCSCHHH
T ss_pred EEEeCCCeeeCHHHHHHHHHhCC-----------CceEEEeCCCCcchhh
Confidence 99999999999998877766543 2478999999998643
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-10 Score=123.28 Aligned_cols=240 Identities=13% Similarity=0.105 Sum_probs=156.9
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+..++|||||++|+++...+ .+|+++|+.+|+.+...........++|+|||+.|+++...
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d----~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~--------------- 94 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA--------------- 94 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT---------------
T ss_pred cceEEECCCCCEEEEECCCC----CeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECC---------------
Confidence 57799999999997775433 46999999999876533322244689999999999887622
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...|+++++.+.. .+..+.... ....+.|+|||++|++.... ...|+++|+.++. ....+..+.
T Consensus 95 ~~~v~v~d~~~~~--~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~--------~~~~~~~~~ 158 (391)
T 1l0q_A 95 SSTLSVIDTTSNT--VAGTVKTGK---SPLGLALSPDGKKLYVTNNG---DKTVSVINTVTKA--------VINTVSVGR 158 (391)
T ss_dssp TTEEEEEETTTTE--EEEEEECSS---SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE--------EEEEEECCS
T ss_pred CCEEEEEECCCCe--EEEEEeCCC---CcceEEECCCCCEEEEEeCC---CCEEEEEECCCCc--------EEEEEecCC
Confidence 2468899987653 222333222 23678999999999776432 3689999998731 011121121
Q ss_pred cceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 371 DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 371 ~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
......|+|+|+.|++.... ...|+.+|+.++. ....+... .......+..+++.|++.........|++||+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~---~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS---VIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---EEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CcceEEECCCCCEEEEEeCC---CCEEEEEECCCCe---EEEEEecC-CCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 11122589999988876543 3569999987754 33344433 23332233345456666665334568999999
Q ss_pred CCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 451 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 451 ~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++.+..+.... .+..+.++++++.++++.+.- ..++.+|+
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~ 273 (391)
T 1l0q_A 232 GTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFX---NTVSVIDT 273 (391)
T ss_dssp TTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTT---TEEEEEET
T ss_pred CCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCC---CEEEEEEC
Confidence 8888777776653 245677788888887765432 57999999
|
| >2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.1e-12 Score=146.56 Aligned_cols=141 Identities=11% Similarity=0.060 Sum_probs=86.8
Q ss_pred EEEECCCCcEEEEEEEEec--CcCCCCCccEEEEecCCCCCccCCc-CcHHHH--HHHHcCCEEEEEecCCCC--CCCCh
Q psy2521 529 VYFRSKDGTRVPMYIIHRV--GALRNRRNPVIIYGYGGYGVSVLPT-FSISRC--MFLRHFNGIYAIPNIRGG--GELGE 601 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~--~~~~~~~~P~ll~~hGg~~~~~~~~-~~~~~~--~~l~~~G~~v~~~~~RG~--g~~G~ 601 (783)
-.+...+|..+.+.-+.-. +.......|+||++||..+...... |..... ..|...||.|+++|+||+ |..+.
T Consensus 81 ~~~~~~~g~~~~g~~l~y~~~G~~~~~~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~ 160 (444)
T 2vat_A 81 SLFTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGP 160 (444)
T ss_dssp EEEECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSST
T ss_pred CCeecCCCCEecceeEEEEEecCCCCCCCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCC
Confidence 3455667766655332211 1111123589999999877765411 332211 124346999999999994 32221
Q ss_pred hHHhh--cc-----ccCCcChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 602 DWHNA--GR-----LLKKQNCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 602 ~~~~~--g~-----~~~~~~~~~D~~a~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
.-... +. .......++|+.+.+..+++. ...++ +.++|||+||.+++.++.++|+.++++|+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~f~~~t~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 161 CSPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp TSBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred CCCCcccccccccccccccccHHHHHHHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 00000 00 000124677777777776654 23457 99999999999999999999999999999887543
|
| >3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=99.42 E-value=5.5e-13 Score=142.11 Aligned_cols=209 Identities=16% Similarity=0.072 Sum_probs=135.2
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCC-CCCccEEEEecCCCCCccCCcCcHHHHHHHHc------CCEEEEEecCCCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALR-NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH------FNGIYAIPNIRGG 596 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~-~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~RG~ 596 (783)
.++++++.|. -|....++++.|+++.. ++++|+|++.||...... .......+.. .+++|+.++...
T Consensus 11 ~v~~~~~~S~~l~~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~~----~~~~~~~l~~~~~~~~~~~IvV~i~~~~- 85 (331)
T 3gff_A 11 EYQSKRLESRLLKETREYVIALPEGYAQSLEAYPVVYLLDGEDQFDH----MASLLQFLSQGTMPQIPKVIIVGIHNTN- 85 (331)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCTTGGGSCCCEEEEEESSHHHHHHH----HHHHHHHHTCSSSCSSCCCEEEEECCSS-
T ss_pred eEEEEEEEecCCCCeEEEEEEeCCCCCCCCCCccEEEEecChhhhHH----HHHHHHHHHhhhhcCCCCEEEEEECCCC-
Confidence 4566666665 57889999999999865 678999999999521110 1123344432 257777766511
Q ss_pred CCCChhHHh-------hc------cc-cCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCce
Q psy2521 597 GELGEDWHN-------AG------RL-LKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELY 660 (783)
Q Consensus 597 g~~G~~~~~-------~g------~~-~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf 660 (783)
...++.. .| .. ..+...|.+++ ..+.++.++..+++.| +|+|+|+||++++.++.++|++|
T Consensus 86 --R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F 162 (331)
T 3gff_A 86 --RMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLF 162 (331)
T ss_dssp --HHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSC
T ss_pred --cccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhh
Confidence 1111100 00 00 12234466666 3566666665566655 89999999999999999999999
Q ss_pred eEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCC-------CCC
Q psy2521 661 GAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDD-------RVP 733 (783)
Q Consensus 661 ~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~-------~V~ 733 (783)
+++++.+|.+.+-. + ...+.+... +...+. ...| +++.+|+.|. +++
T Consensus 163 ~~~~~~S~~~w~~~----------------~---~~~~~~~~~--~~~~~~----~~~~-l~l~~G~~d~~~~~~~~~~~ 216 (331)
T 3gff_A 163 SAYLALDTSLWFDS----------------P---HYLTLLEER--VVKGDF----KQKQ-LFMAIANNPLSPGFGVSSYH 216 (331)
T ss_dssp SEEEEESCCTTTTT----------------T---HHHHHHHHH--HHHCCC----SSEE-EEEEECCCSEETTTEECCHH
T ss_pred heeeEeCchhcCCh----------------H---HHHHHHHHH--hhcccC----CCCe-EEEEeCCCCCCCccchHHHH
Confidence 99999999763211 0 011111110 000011 1233 9999999998 678
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
..++.+++++|+.. ...|.++.+.++++++|+..
T Consensus 217 ~~~~~~l~~~Lk~~----~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 217 KDLNLAFADKLTKL----APKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp HHHHHHHHHHHHHH----CCTTEEEEEEECTTCCTTTH
T ss_pred HHHHHHHHHHHHhc----cCCCceEEEEECCCCCcccc
Confidence 88899999999987 33367899999999999864
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=6.2e-11 Score=146.89 Aligned_cols=282 Identities=12% Similarity=0.071 Sum_probs=162.0
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-CCceEEEE
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-GSDWNTLH 238 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-G~d~~~i~ 238 (783)
+..|...|++++|... ..||+.+..+++.+.|.... ..+..++|||||++|||+.... .....+||
T Consensus 17 ~~~~~~S~~~iaf~~~------~~l~~~~~~gg~~~~lt~~~-------~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~ 83 (1045)
T 1k32_A 17 LLNPDIHGDRIIFVCC------DDLWEHDLKSGSTRKIVSNL-------GVINNARFFPDGRKIAIRVMRGSSLNTADLY 83 (1045)
T ss_dssp CEEEEEETTEEEEEET------TEEEEEETTTCCEEEEECSS-------SEEEEEEECTTSSEEEEEEEESTTCCEEEEE
T ss_pred EeCcEEeCCEEEEEEC------CcEEEEECCCCcEEEeeeCC-------CcccCeEECCCCCEEEEEEeeccCCCCCeEE
Confidence 4445555888888764 26888776666666665422 3478899999999999998751 11237899
Q ss_pred EEECCCCcccccccccccc-------CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC-------
Q psy2521 239 IKDVDTGKDYPEVLKNVKF-------PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD------- 304 (783)
Q Consensus 239 v~Dl~tg~~~~~~~~~~~~-------~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~------- 304 (783)
++|+++|+...++...... ..++|||||+ ++|+...+.. .....+||.+++.+...
T Consensus 84 ~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~---------~~~~~~l~~~~~~~g~~~~l~~~~ 153 (1045)
T 1k32_A 84 FYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQP---------FSSMTCLYRVENDGINFVPLNLGP 153 (1045)
T ss_dssp EEETTTTEEEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSS---------STTCCEEEEEEGGGTEEEECCSCS
T ss_pred EEECCCCCeEEcccCCCcccccccccccccCCCCCE-EEEEECCcCC---------CcccceEEEEECCCCCeEEecCCC
Confidence 9999999866555443333 5799999998 8887743210 00011122221111000
Q ss_pred -----------------------------------------------------------Ccee-----------EEec-C
Q psy2521 305 -----------------------------------------------------------KDIP-----------VVEF-P 313 (783)
Q Consensus 305 -----------------------------------------------------------~d~~-----------v~~~-~ 313 (783)
.+.+ |+.. .
T Consensus 154 ~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~ 233 (1045)
T 1k32_A 154 ATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDL 233 (1045)
T ss_dssp CSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEET
T ss_pred cceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeC
Confidence 0000 1100 0
Q ss_pred ---------CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC------------ccc
Q psy2521 314 ---------NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG------------MDH 372 (783)
Q Consensus 314 ---------~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~------------~~~ 372 (783)
.... ...+.|||||++|++.. ...||++++.++ .+ ..+... ...
T Consensus 234 ~g~~~~~l~~~~~-~~~~~~SpDG~~la~~~-----~~~i~~~d~~~~---~l------~~l~~~~~~~~~~~~~~~~~v 298 (1045)
T 1k32_A 234 DGKDLRKHTSFTD-YYPRHLNTDGRRILFSK-----GGSIYIFNPDTE---KI------EKIEIGDLESPEDRIISIPSK 298 (1045)
T ss_dssp TSCSCEECCCCCS-SCEEEEEESSSCEEEEE-----TTEEEEECTTTC---CE------EECCCCCCCBCCSEEEECGGG
T ss_pred CCCcceEecCCCC-cceeeEcCCCCEEEEEe-----CCEEEEecCCce---Ee------eeeccCccccccccccccccc
Confidence 0000 12346777777776642 246777766331 11 111110 011
Q ss_pred eeEEEE-eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE-EEEC
Q psy2521 373 HHEIIA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD-LHDL 450 (783)
Q Consensus 373 ~~~~~s-~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~-~~dl 450 (783)
....|+ |||++|++.+ ...|+.+++.++. ...+..+. ...+..+.+.+++.|++... ..+|+ ++++
T Consensus 299 ~~~~~S~pdG~~la~~~-----~~~i~~~~~~~~~---~~~~~~~~-~~~~~~~~~sdg~~l~~~s~---~~~l~~~~d~ 366 (1045)
T 1k32_A 299 FAEDFSPLDGDLIAFVS-----RGQAFIQDVSGTY---VLKVPEPL-RIRYVRRGGDTKVAFIHGTR---EGDFLGIYDY 366 (1045)
T ss_dssp GEEEEEECGGGCEEEEE-----TTEEEEECTTSSB---EEECSCCS-CEEEEEECSSSEEEEEEEET---TEEEEEEEET
T ss_pred ceeeecCCCCCEEEEEE-----cCEEEEEcCCCCc---eEEccCCC-cceEEeeeEcCCCeEEEEEC---CCceEEEEEC
Confidence 122599 9999999877 3479999987654 33333332 31233333335455665544 35899 9999
Q ss_pred CCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 451 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 451 ~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++. ..+......+..+.++||++.+++... ...++.+|+
T Consensus 367 ~~~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~----~~~v~~~d~ 407 (1045)
T 1k32_A 367 RTGKA-EKFEENLGNVFAMGVDRNGKFAVVAND----RFEIMTVDL 407 (1045)
T ss_dssp TTCCE-EECCCCCCSEEEEEECTTSSEEEEEET----TSEEEEEET
T ss_pred CCCCc-eEecCCccceeeeEECCCCCEEEEECC----CCeEEEEEC
Confidence 65554 556633456778888999988876543 248999999
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.2e-11 Score=143.08 Aligned_cols=252 Identities=11% Similarity=0.070 Sum_probs=162.5
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEECCCCccccc----c--ccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 217 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----V--LKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 217 SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~----~--~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+|||++++|....+|.....||+++..+|+...+ . ... ....+++|||||+.|+|+.... ..
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-----------G~ 148 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-----------GS 148 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-----------TC
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-----------CC
Confidence 4999999999998887777899999887764321 1 111 1246899999999999998542 12
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC------------CcEEEEEECCCCCCCcc
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ------------GSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~------------~~~l~~~dl~~g~~~~l 357 (783)
...+|+++++.++..... ...... ..++.|||||+.|++....... ..+||++++.++.
T Consensus 149 ~~~~i~v~d~~tg~~~~~-~~~~~~----~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~---- 219 (710)
T 2xdw_A 149 DWVTIKFMKVDGAKELPD-VLERVK----FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ---- 219 (710)
T ss_dssp SCEEEEEEETTTTEEEEE-EEEEEC----SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG----
T ss_pred ceEEEEEEECCCCCCCcc-cccCcc----cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc----
Confidence 234899999987642211 111111 2368999999999998765431 3679999998731
Q ss_pred cCCCCceeeecCc--cc-eeE-EEEeeCCEEEEEECCCCC-CceEEEEcCCC------CCCCCcEEeecCCCCceEEEEE
Q psy2521 358 SGKFPLKTVIPGM--DH-HHE-IIANNGPELIVKTTKNAP-KGKVVTINLNN------PCEKNWKTLIPEDENRTLDVVA 426 (783)
Q Consensus 358 ~~~~~~~~l~~~~--~~-~~~-~~s~dg~~l~~~t~~~~~-~~~L~~~d~~~------~~~~~~~~li~~~~~~~l~~~~ 426 (783)
.....+.... .. ... .|||||++|++.+.+... ...|+.+|+++ +. ..++.+..... ... ..+
T Consensus 220 ---~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~l~~~~~-~~~-~~~ 293 (710)
T 2xdw_A 220 ---SEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI-LKWVKLIDNFE-GEY-DYV 293 (710)
T ss_dssp ---GGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS-CCCEEEECSSS-SCE-EEE
T ss_pred ---ccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc-cceEEeeCCCC-cEE-EEE
Confidence 0111222221 11 122 599999999998875433 56899999876 32 13667766553 333 345
Q ss_pred EeeCCEEEEEEecCC-eeEEEEEECCCCce--eeeecCC-C-eEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 427 AVANNKLIVHYIQNV-RSVMDLHDLNTGKR--LHSFPLD-L-GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 427 ~~~g~~l~~~~~~~g-~~~l~~~dl~~G~~--~~~l~~~-~-g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+|+.|++....++ ..+|+++|+.+++. .+.+..+ . ..+.++.++ +++.+++++..-. -..++.+|+
T Consensus 294 s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~g-~~~l~~~~~ 366 (710)
T 2xdw_A 294 TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHDV-KNTLQLHDL 366 (710)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEETT-EEEEEEEET
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEECC-EEEEEEEEC
Confidence 567789998887665 56899999976641 2444433 2 356666665 3456776665432 346889998
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-10 Score=119.63 Aligned_cols=265 Identities=11% Similarity=0.114 Sum_probs=172.5
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCC-------
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS------- 232 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~------- 232 (783)
-+.-+.+|+++||....+ ...||+++..+...+.|.+- ...-++|||++|.|+....+.
T Consensus 18 ~g~~~~~g~~iy~~n~~d---~~~ly~~~~dg~~~~~l~~~-----------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~ 83 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTND---NGRLYAMNIDGSNIHKLSND-----------TAMYINADKNYVYYVRNNNQKITSQTFF 83 (302)
T ss_dssp TTCEEEETTEEEEEEGGG---TTEEEEEETTSCSCEEEEEE-----------EEEEEEECSSEEEEEEECC------CCS
T ss_pred ceEEEEeCCEEEEEeCCC---CceEEEEcCCCCCCEEccCC-----------ceeeEEEcCCEEEEEECCCCccccccee
Confidence 355678999999976432 36899998755555555441 124568999999999876542
Q ss_pred --ceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEE
Q psy2521 233 --DWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 310 (783)
Q Consensus 233 --d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~ 310 (783)
....||.+++++++...++.. ....|+++++.|||+.... .....||+.+++.... ..|.
T Consensus 84 ~~n~~~Iy~i~~dg~~~~~l~~~----~~~~~s~~g~~Iy~~~~~~------------~~~~~Iy~~~~dGs~~--~~lt 145 (302)
T 3s25_A 84 SYDRNSLCRIKRNGHGSTVLDPD----PCIYASLIGNYIYYLHYDT------------QTATSLYRIRIDGEEK--KKIK 145 (302)
T ss_dssp SCCSEEEEEEETTSCCCEEEECS----CEEEEEEETTEEEEEEESS------------SSCEEEEEEETTSCCC--EEEE
T ss_pred ccCCCeEEEEeCCCCcceEeecC----CccEEEEeCCEEEEEeecC------------CCCceEEEEECCCCCe--EEEe
Confidence 257899999999875544322 3458999999999987311 1245799999986532 3344
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECC
Q psy2521 311 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTK 390 (783)
Q Consensus 311 ~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~ 390 (783)
.... ..++++|++|+++.. ....||+++++++. .+.+..+. ....+.|+|++||+....
T Consensus 146 ~~~~-------~~~~~~g~~iy~t~~---g~~~Iy~~~l~g~~---------~~~l~~~~--~~~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 146 NHYL-------FTCNTSDRYFYYNNP---KNGQLYRYDTASQS---------EALFYDCN--CYKPVVLDDTNVYYMDVN 204 (302)
T ss_dssp SSCC-------CCSEEETTEEEEECT---TTCCEEEEETTTTE---------EEEEECSC--EEEEEEEETTEEEEEEGG
T ss_pred CCCc-------eEeeEECCEEEEEeC---CCceEEEEECCCCC---------EEEEeCCC--ccceeeecCCEEEEEEcC
Confidence 3221 245889999998754 34789999998741 22333321 122366999999997654
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeee
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHIS 470 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s 470 (783)
+. .+|+++++++.. .+.| ... .+..+. +.+++|++.....+ ..|+.+++ +|...+.|.... +..
T Consensus 205 ~~--~~I~~~~ldG~~---~~~L-t~~---~~~~~~-~~g~~Iy~~~~~~~-~~i~~~~~-DG~~r~~l~~~~--~~~-- 268 (302)
T 3s25_A 205 RD--NAIVHVNINNPN---PVVL-TEA---NIEHYN-VYGSLIFYQRGGDN-PALCVVKN-DGTGFKELAKGE--FCN-- 268 (302)
T ss_dssp GT--TEEEEECSSSCC---CEEC-SCS---CEEEEE-EETTEEEEEECSSS-CEEEEEET-TSCCCEEEEESC--EEE--
T ss_pred CC--cEEEEEECCCCC---eEEE-eCC---CcceEE-ECCCEEEEEECCCC-cEEEEEEC-CCCccEEeeCCc--cce--
Confidence 32 689999999866 2334 332 233444 44589988765544 78999999 787656665432 222
Q ss_pred ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 471 GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 471 ~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..++.+|++ .+... .++++.+
T Consensus 269 i~i~~d~Iy~t--d~~~~-~i~~~~~ 291 (302)
T 3s25_A 269 INVTSQYVYFT--DFVSN-KEYCTST 291 (302)
T ss_dssp EEECSSEEEEE--ETTTC-CEEEEES
T ss_pred EEEeCCEEEEE--ECCCC-eEEEEEC
Confidence 23456778765 44433 4888887
|
| >1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-12 Score=135.32 Aligned_cols=204 Identities=17% Similarity=0.125 Sum_probs=119.8
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCC-CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY-GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
.+|.++.+... +..|.||++||.. +......|.... ..|+ .||.|+++|+||.|... ... ..
T Consensus 12 ~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~~-~~L~-~~~~vi~~Dl~G~G~S~---~~~----~~ 74 (282)
T 1iup_A 12 AAGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLTI-PALS-KFYRVIAPDMVGFGFTD---RPE----NY 74 (282)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTTH-HHHT-TTSEEEEECCTTSTTSC---CCT----TC
T ss_pred ECCEEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHHH-Hhhc-cCCEEEEECCCCCCCCC---CCC----CC
Confidence 36777765432 2346799999953 332112344333 4455 59999999999955432 111 11
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh-------cccccc----c
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR-------FNKFTI----A 681 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~-------~~~~~~----~ 681 (783)
...++++.+.+..+++. ...+++.|+|||+||.+++.++.++|++++++|+..|...... ...... .
T Consensus 75 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T 1iup_A 75 NYSKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENM 152 (282)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHHH
Confidence 23566776666666554 2346899999999999999999999999999998876432100 000000 0
Q ss_pred ccchhh-------------------hCCCCCHHHHHHHHh---------cC-cccCCCCCCCCCcCCcEEEEecCCCCCC
Q psy2521 682 YYSESE-------------------FGSPNNKTHFHNLLS---------YS-PLHNIKVPPNNTQYPATLVLTGDHDDRV 732 (783)
Q Consensus 682 ~~~~~~-------------------~g~p~~~~~~~~~~~---------~s-p~~~v~~~~~~~~~P~~Li~~g~~D~~V 732 (783)
..+... ...|.....+..+.. .. +...+.. +.+| +|+++|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~ 227 (282)
T 1iup_A 153 RNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKT----LPNE-TLIIHGREDQVV 227 (282)
T ss_dssp HHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTT----CCSC-EEEEEETTCSSS
T ss_pred HHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhh----cCCC-EEEEecCCCCCC
Confidence 000000 011111111111100 00 0012222 6677 999999999999
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 733 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 733 ~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
++..+.++++.+.. .++.+++++||...-
T Consensus 228 p~~~~~~~~~~~~~-----------~~~~~i~~~gH~~~~ 256 (282)
T 1iup_A 228 PLSSSLRLGELIDR-----------AQLHVFGRCGHWTQI 256 (282)
T ss_dssp CHHHHHHHHHHCTT-----------EEEEEESSCCSCHHH
T ss_pred CHHHHHHHHHhCCC-----------CeEEEECCCCCCccc
Confidence 99888777665432 478899999998643
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=3.4e-11 Score=142.36 Aligned_cols=262 Identities=10% Similarity=0.087 Sum_probs=171.0
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC--------Cc
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG--------SD 233 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G--------~d 233 (783)
.++++|.++.|....++.....||+++..+++.....-++ .....++|| ||+.|+|+..... ..
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-------~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD-------VKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE-------EESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC-------ceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 4678999999999888888899999987665532211000 113568999 9999999987643 33
Q ss_pred eEEEEEEECCCCccccccc---c---ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCce
Q psy2521 234 WNTLHIKDVDTGKDYPEVL---K---NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDI 307 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~~---~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~ 307 (783)
..+||++++.++......+ . ...+.++.|||||+.|+++.... ....+||++++.++..+-+
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------------~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS------------TSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS------------SSCCEEEEEETTSTTCCCE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC------------CCCcEEEEEECCCCCCceE
Confidence 4689999998875321111 1 11235789999999999988432 1235899999987654444
Q ss_pred eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEE
Q psy2521 308 PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVK 387 (783)
Q Consensus 308 ~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~ 387 (783)
.+....+ .. ..+ +++||++|+|..+.......|+.+|++++. ...|+.++....... .|+++|++|++.
T Consensus 275 ~l~~~~~-~~--~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~------~~~~~~l~~~~~~~~-~~s~~g~~lv~~ 343 (693)
T 3iuj_A 275 TVQGDLD-AD--VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG------PAHWRDLIPERQQVL-TVHSGSGYLFAE 343 (693)
T ss_dssp EEECSSS-SC--EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC------GGGCEEEECCCSSCE-EEEEETTEEEEE
T ss_pred EEeCCCC-ce--EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC------ccccEEEecCCCCEE-EEEEECCEEEEE
Confidence 4443332 21 223 789999999988765445899999998741 122555665555445 799999999987
Q ss_pred ECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEEec-CCeeEEEEEECCCCceeeeec
Q psy2521 388 TTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQ-NVRSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 388 t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~~-~g~~~l~~~dl~~G~~~~~l~ 460 (783)
..+++ ..+|+.++++++. .+.+.... ...+..+.. .+++.+++.+.. .....|+.+|+.+|+. +.+.
T Consensus 344 ~~~~g-~~~l~~~d~~g~~---~~~l~~p~-~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~-~~l~ 412 (693)
T 3iuj_A 344 YMVDA-TARVEQFDYEGKR---VREVALPG-LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI-SLYR 412 (693)
T ss_dssp EEETT-EEEEEEECTTSCE---EEEECCSS-SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE-EEEE
T ss_pred EEECC-eeEEEEEECCCCe---eEEeecCC-CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE-EEEE
Confidence 76543 4579999987643 23332222 223333322 244677776654 4557899999976654 4443
|
| >1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.1e-12 Score=137.15 Aligned_cols=190 Identities=15% Similarity=0.142 Sum_probs=114.6
Q ss_pred cEEEEecCCC-CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 556 PVIIYGYGGY-GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 556 P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
|+||++||.. +......|.......|.+ +|.|+++|+||.|..... ......++++.+.+..+++. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWGKSDSV-------VNSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999963 222222344433245665 699999999996543311 11134677777777666664 334
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc------------cc--cccc----cchhh-hCCCC--C
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN------------KF--TIAY----YSESE-FGSPN--N 693 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~------------~~--~~~~----~~~~~-~g~p~--~ 693 (783)
+++.|+|||+||.+++.++.++|++++++|+..|........ .. .... .+... +..+. .
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 689999999999999999999999999999887643210000 00 0000 00000 01111 1
Q ss_pred HHH--------------HHHHH-hc--C------cccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCC
Q psy2521 694 KTH--------------FHNLL-SY--S------PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 750 (783)
Q Consensus 694 ~~~--------------~~~~~-~~--s------p~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~ 750 (783)
.+. +..+. .+ . ....+.. +++| +|+++|++|..|++..+.++++.+..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~~---- 257 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAE----IKAQ-TLIVWGRNDRFVPMDAGLRLLSGIAG---- 257 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHSTT----
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhh----cCCC-eEEEeeCCCCccCHHHHHHHHhhCCC----
Confidence 111 11000 00 0 1112222 5777 99999999999999988877766543
Q ss_pred CCCCCCcEEEEEeCCCCccCC
Q psy2521 751 LPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 751 ~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.++.+++++||...
T Consensus 258 -------~~~~~i~~~gH~~~ 271 (289)
T 1u2e_A 258 -------SELHIFRDCGHWAQ 271 (289)
T ss_dssp -------CEEEEESSCCSCHH
T ss_pred -------cEEEEeCCCCCchh
Confidence 36888999999864
|
| >2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A | Back alignment and structure |
|---|
Probab=99.41 E-value=2.1e-12 Score=135.50 Aligned_cols=121 Identities=14% Similarity=0.112 Sum_probs=82.1
Q ss_pred CCCC-cEEEEEEEEecCcCCCCCccEEEEecCC-CCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 533 SKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 533 s~dg-~~v~~~~~~p~~~~~~~~~P~ll~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
..+| .++.+... + +++.|.||++||. ++......|.... ..|++ .|.|+++|+||.|.... . .
T Consensus 19 ~~~g~~~l~y~~~---G---~g~~~~vvllHG~~pg~~~~~~w~~~~-~~L~~-~~~via~Dl~G~G~S~~---~----~ 83 (291)
T 2wue_A 19 DVDGPLKLHYHEA---G---VGNDQTVVLLHGGGPGAASWTNFSRNI-AVLAR-HFHVLAVDQPGYGHSDK---R----A 83 (291)
T ss_dssp ESSSEEEEEEEEE---C---TTCSSEEEEECCCCTTCCHHHHTTTTH-HHHTT-TSEEEEECCTTSTTSCC---C----S
T ss_pred EeCCcEEEEEEec---C---CCCCCcEEEECCCCCccchHHHHHHHH-HHHHh-cCEEEEECCCCCCCCCC---C----C
Confidence 3578 78766543 2 2344689999997 4333223344433 44664 69999999999554321 1 1
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.....++++.+.+..+++. .+.+++.|+|||+||.+++.++.++|++++++|+..|..
T Consensus 84 ~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~ 141 (291)
T 2wue_A 84 EHGQFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGG 141 (291)
T ss_dssp CCSSHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSS
T ss_pred CCCcCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCC
Confidence 1134566776666655554 223689999999999999999999999999999887643
|
| >3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.5e-12 Score=123.82 Aligned_cols=153 Identities=14% Similarity=0.049 Sum_probs=107.7
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
++.|.||++||..+.... .|...+...+. .++ .++.+|.+ ...++++.+.+..+++. .
T Consensus 15 g~~~~vv~~HG~~~~~~~-~~~~~~~~~~~-~~~---~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~ 72 (191)
T 3bdv_A 15 SQQLTMVLVPGLRDSDDE-HWQSHWERRFP-HWQ---RIRQREWY---------------QADLDRWVLAIRRELSV--C 72 (191)
T ss_dssp HTTCEEEEECCTTCCCTT-SHHHHHHHHCT-TSE---ECCCSCCS---------------SCCHHHHHHHHHHHHHT--C
T ss_pred CCCceEEEECCCCCCchh-hHHHHHHHhcC-CeE---EEeccCCC---------------CcCHHHHHHHHHHHHHh--c
Confidence 456899999998765532 34333333333 344 45666622 22366777777766664 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 712 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~ 712 (783)
+ +++.++|||+||.+++.++.++|+.++++|+..|....... + +.. .+ +..
T Consensus 73 ~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------~------~~~----------~~---~~~- 123 (191)
T 3bdv_A 73 T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------I------DDR----------IQ---ASP- 123 (191)
T ss_dssp S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT--------C------TTT----------SC---SSC-
T ss_pred C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc--------C------ccc----------cc---ccc-
Confidence 3 79999999999999999999999999999999997754321 1 000 12 222
Q ss_pred CCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 713 ~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
++.| +|+++|++|..||+.++.++++.+ .. ++.+++++||....
T Consensus 124 ---~~~P-~lii~g~~D~~~~~~~~~~~~~~~-~~-----------~~~~~~~~gH~~~~ 167 (191)
T 3bdv_A 124 ---LSVP-TLTFASHNDPLMSFTRAQYWAQAW-DS-----------ELVDVGEAGHINAE 167 (191)
T ss_dssp ---CSSC-EEEEECSSBTTBCHHHHHHHHHHH-TC-----------EEEECCSCTTSSGG
T ss_pred ---CCCC-EEEEecCCCCcCCHHHHHHHHHhc-CC-----------cEEEeCCCCccccc
Confidence 4556 999999999999999988888876 22 68899999999754
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.40 E-value=7.7e-11 Score=126.27 Aligned_cols=235 Identities=12% Similarity=0.051 Sum_probs=146.6
Q ss_pred EEeeEEECCCCcEEEEEEecC----CCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKS----GSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~----G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..+++ ||++|||..... +....+||++|+++|+.... . ....+.|||||+.|+|.+.+..
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~--~~~~~~~SpDg~~la~~~~~~~-------- 81 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI--E--NATMPRISPDGKKIAFMRANEE-------- 81 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE--E--SCEEEEECTTSSEEEEEEEETT--------
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc--c--cCCCeEECCCCCEEEEEEeccC--------
Confidence 4677888 999999987542 22357899999999986544 2 2368999999999999985421
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC-----------------------CCCc
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN-----------------------TQGS 342 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~-----------------------~~~~ 342 (783)
....+||++++.++. .+.+...+ . ...+.|||||++|++..... ....
T Consensus 82 ---~~~~~l~~~~~~~g~--~~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 82 ---KKVSEIWVADLETLS--SKKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp ---TTEEEEEEEETTTTE--EEEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEE
T ss_pred ---CCcceEEEEECCCCc--eEEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 123469998887642 33344332 2 46789999999999987431 0136
Q ss_pred EEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCC-----C-CceEEEEcCCCCCCCCcEEeecC
Q psy2521 343 DLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNA-----P-KGKVVTINLNNPCEKNWKTLIPE 416 (783)
Q Consensus 343 ~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~-----~-~~~L~~~d~~~~~~~~~~~li~~ 416 (783)
.||++|+.+|.. ...+... ......|+||| ++|.++.+. . ..+|+.++ ++. ++.+...
T Consensus 153 ~l~~~d~~~~~~--------~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~ 216 (347)
T 2gop_A 153 TFWIFDTESEEV--------IEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK---EEKMFEK 216 (347)
T ss_dssp EEEEEETTTTEE--------EEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE---EEEEEEE
T ss_pred eEEEEECCCCeE--------EeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc---eEEeccC
Confidence 899999987410 0223222 22223599998 666665432 1 56899999 333 4555543
Q ss_pred CCCceEEEEEEeeCCEEEEEEecC-----CeeEEEEEECCCCceeeeecCC-CeEEEe-eeccccccEEEEEEecCCCCc
Q psy2521 417 DENRTLDVVAAVANNKLIVHYIQN-----VRSVMDLHDLNTGKRLHSFPLD-LGQITH-ISGRRKYNEVFYGFTSFLQPG 489 (783)
Q Consensus 417 ~~~~~l~~~~~~~g~~l~~~~~~~-----g~~~l~~~dl~~G~~~~~l~~~-~g~v~~-~s~~~d~~~l~~~~ss~~~P~ 489 (783)
.. ...+ .++|+.|++..... ...+|+++| +|+. +.+... .+.+.. +.++ ++ +++..+.-. -.
T Consensus 217 --~~-~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~ 285 (347)
T 2gop_A 217 --VS-FYAV-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SV 285 (347)
T ss_dssp --ES-EEEE-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE--EEEEEEETT-EE
T ss_pred --cc-eeeE-CCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc--EEEEEecCC-cE
Confidence 22 2233 66767788777554 246899998 5664 445433 455654 6666 54 555443322 23
Q ss_pred eEEEEe
Q psy2521 490 TIYHCN 495 (783)
Q Consensus 490 ~vy~~d 495 (783)
.+| ++
T Consensus 286 ~l~-~~ 290 (347)
T 2gop_A 286 NLY-IW 290 (347)
T ss_dssp EEE-EE
T ss_pred EEE-Ec
Confidence 455 55
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-10 Score=122.80 Aligned_cols=269 Identities=11% Similarity=0.099 Sum_probs=159.7
Q ss_pred EEeCCeEEEEEEcCCC--CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEE
Q psy2521 164 QRQENNYFYFHNKGLQ--NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 241 (783)
Q Consensus 164 ~~~G~~~yy~~~~~~~--~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~D 241 (783)
+++|+++|.....+.. ....+++.+..+++....++... ...++.|||||++++++.... ..|+++|
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~s~dg~~l~v~~~~~----~~v~~~d 117 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-------KPFGATINNTTQTLWFGNTVN----SAVTAID 117 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-------CCCSEEEETTTTEEEEEETTT----TEEEEEE
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-------CcceEEECCCCCEEEEEecCC----CEEEEEe
Confidence 3456666655433210 12455555543443332222111 134689999999887765433 3699999
Q ss_pred CCCCcccccc-cccc---------ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 242 VDTGKDYPEV-LKNV---------KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 242 l~tg~~~~~~-~~~~---------~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
+++|+.+... .... ....++|+|||+.+|+.... ....|+++++.+... +..+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--------------~~~~i~~~d~~~~~~--~~~~~ 181 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--------------KESVIWVVDGGNIKL--KTAIQ 181 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--------------SSCEEEEEETTTTEE--EEEEC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--------------CCceEEEEcCCCCce--EEEec
Confidence 9999865322 1111 12468999999988877632 134688888865431 12222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C--cccee--EEEEeeCCEEEE
Q psy2521 312 FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G--MDHHH--EIIANNGPELIV 386 (783)
Q Consensus 312 ~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~--~~~~~--~~~s~dg~~l~~ 386 (783)
.... ....+.++|||++|++... ...|+++|+.++.. ...+.. . ..... -.|+|||+.+|+
T Consensus 182 ~~~~--~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~--------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 182 NTGK--MSTGLALDSEGKRLYTTNA----DGELITIDTADNKI--------LSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp CCCT--TCCCCEEETTTTEEEEECT----TSEEEEEETTTTEE--------EEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred CCCC--ccceEEECCCCCEEEEEcC----CCeEEEEECCCCeE--------EEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 1111 1246789999999887532 36899999987410 111111 1 11111 258999998877
Q ss_pred EECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEE
Q psy2521 387 KTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQI 466 (783)
Q Consensus 387 ~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v 466 (783)
.... ...|+.+|+.+++ ....++.... .......+++.+++....+ ..|.+||+.+++.+..+..+. ..
T Consensus 248 ~~~~---~~~v~~~d~~~~~---~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~-~~ 316 (353)
T 3vgz_A 248 TDSK---AAEVLVVDTRNGN---ILAKVAAPES--LAVLFNPARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPT-HP 316 (353)
T ss_dssp EESS---SSEEEEEETTTCC---EEEEEECSSC--CCEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCS-EE
T ss_pred EeCC---CCEEEEEECCCCc---EEEEEEcCCC--ceEEECCCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCC-CC
Confidence 5532 3579999997765 2333333222 2223445556677765444 479999998888777776653 45
Q ss_pred EeeeccccccEEEEEEec
Q psy2521 467 THISGRRKYNEVFYGFTS 484 (783)
Q Consensus 467 ~~~s~~~d~~~l~~~~ss 484 (783)
..+.++++++.++++..+
T Consensus 317 ~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 317 NSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEECTTSCEEEEEEEC
T ss_pred CeEEEcCCCCEEEEEEcc
Confidence 577788999989888776
|
| >3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.39 E-value=9.8e-13 Score=140.53 Aligned_cols=102 Identities=15% Similarity=0.131 Sum_probs=75.2
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... |. .++...||.|+++|+||.|... . .......++++.+.+..+++. .+.
T Consensus 81 ~~~vv~~hG~~~~~~~--~~----~~~~~lg~~Vi~~D~~G~G~S~---~----~~~~~~~~~~~a~dl~~~l~~--l~~ 145 (330)
T 3p2m_A 81 APRVIFLHGGGQNAHT--WD----TVIVGLGEPALAVDLPGHGHSA---W----REDGNYSPQLNSETLAPVLRE--LAP 145 (330)
T ss_dssp CCSEEEECCTTCCGGG--GH----HHHHHSCCCEEEECCTTSTTSC---C----CSSCBCCHHHHHHHHHHHHHH--SST
T ss_pred CCeEEEECCCCCccch--HH----HHHHHcCCeEEEEcCCCCCCCC---C----CCCCCCCHHHHHHHHHHHHHH--hCC
Confidence 5789999998765543 33 3344459999999999954322 1 112334566777666666654 345
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
+++.|+|||+||++++.++.++|++++++|+..|...
T Consensus 146 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 182 (330)
T 3p2m_A 146 GAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPS 182 (330)
T ss_dssp TCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHH
T ss_pred CCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCc
Confidence 6899999999999999999999999999999987654
|
| >3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-12 Score=133.25 Aligned_cols=120 Identities=9% Similarity=-0.015 Sum_probs=85.5
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
..||.++.+... ++.|+||++||..+.... |... ...|.+ ||.|+++|+||.|.... ........
T Consensus 19 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~~-~~~l~~-~~~v~~~D~~G~G~S~~---~~~~~~~~ 83 (306)
T 3r40_A 19 NTSSGRIFARVG--------GDGPPLLLLHGFPQTHVM--WHRV-APKLAE-RFKVIVADLPGYGWSDM---PESDEQHT 83 (306)
T ss_dssp CCTTCCEEEEEE--------ECSSEEEEECCTTCCGGG--GGGT-HHHHHT-TSEEEEECCTTSTTSCC---CCCCTTCG
T ss_pred EeCCEEEEEEEc--------CCCCeEEEECCCCCCHHH--HHHH-HHHhcc-CCeEEEeCCCCCCCCCC---CCCCcccC
Confidence 458888876653 245799999998776643 4433 356776 99999999999554331 11100001
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...++|+.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|.
T Consensus 84 ~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 84 PYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 34567777776666655 34468999999999999999999999999999999864
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6e-11 Score=146.99 Aligned_cols=241 Identities=10% Similarity=0.025 Sum_probs=151.9
Q ss_pred EeeEEEC-CCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFS-DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~S-PDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+..++|| |||++||+..+ .+|+++++.+++....+.... ....++|+ ||+.|+|...
T Consensus 298 v~~~~~S~pdG~~la~~~~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-------------- 356 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVSR------GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-------------- 356 (1045)
T ss_dssp GGEEEEEECGGGCEEEEET------TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET--------------
T ss_pred cceeeecCCCCCEEEEEEc------CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC--------------
Confidence 4568899 99999999872 369999999887654433322 34678999 9999999872
Q ss_pred cCCceEE-EEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIY-YHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~-~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...+| ++++.+.... .+. . .......+.|||||++|++...+ ..|+++|+.+|. ...+.
T Consensus 357 --~~~l~~~~d~~~~~~~--~l~-~--~~~~~~~~~~SpDG~~la~~~~~----~~v~~~d~~tg~---------~~~~~ 416 (1045)
T 1k32_A 357 --EGDFLGIYDYRTGKAE--KFE-E--NLGNVFAMGVDRNGKFAVVANDR----FEIMTVDLETGK---------PTVIE 416 (1045)
T ss_dssp --TEEEEEEEETTTCCEE--ECC-C--CCCSEEEEEECTTSSEEEEEETT----SEEEEEETTTCC---------EEEEE
T ss_pred --CCceEEEEECCCCCce--Eec-C--CccceeeeEECCCCCEEEEECCC----CeEEEEECCCCc---------eEEec
Confidence 23688 8888764321 121 1 12234678999999999976533 589999998852 22333
Q ss_pred cCccce-e-EEEEeeCCEEEEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec
Q psy2521 368 PGMDHH-H-EIIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 368 ~~~~~~-~-~~~s~dg~~l~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
.+.... . ..|+|||++|++.+... .....|+.+|++++. ...+..+. .......+..+|+.|++...+
T Consensus 417 ~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~~~~-~~~~~~~~spdG~~l~~~s~~ 492 (1045)
T 1k32_A 417 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTEN-SHDYAPAFDADSKNLYYLSYR 492 (1045)
T ss_dssp ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSS-SBEEEEEECTTSCEEEEEESC
T ss_pred cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc---EEEeeCCC-cccCCceEcCCCCEEEEEecc
Confidence 222222 1 25999999998876543 234579999998754 44454443 344444566676778776654
Q ss_pred CCe---------------eEEEEEECC-----------------------CCce--eeeecCCCeEEEeeeccccccEEE
Q psy2521 440 NVR---------------SVMDLHDLN-----------------------TGKR--LHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 440 ~g~---------------~~l~~~dl~-----------------------~G~~--~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
++. .+++.+-+. +|.. +..++.+.+.+..+..++++..++
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~ 572 (1045)
T 1k32_A 493 SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 572 (1045)
T ss_dssp CCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEE
T ss_pred cCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEE
Confidence 331 122322221 1211 122333346666777788774444
Q ss_pred E---------EEecCCCCceEEEEeC
Q psy2521 480 Y---------GFTSFLQPGTIYHCNI 496 (783)
Q Consensus 480 ~---------~~ss~~~P~~vy~~d~ 496 (783)
. .+++...+..++.+|+
T Consensus 573 ~~~~~g~~~~~~~~~~~~~~l~~~d~ 598 (1045)
T 1k32_A 573 SVPVHGEFAAYYQGAPEKGVLLKYDV 598 (1045)
T ss_dssp ECCCCCSHHHHHHCCCCCEEEEEEET
T ss_pred EecccCcccccccccCCCceEEEEEC
Confidence 3 3356778899999999
|
| >1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=1.8e-12 Score=136.25 Aligned_cols=204 Identities=17% Similarity=0.135 Sum_probs=119.3
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCC-CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY-GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
.+|.++.+... +..|.||++||.. +......|... ...|.+ +|.|+++|+||.|... . ...
T Consensus 23 ~~g~~l~y~~~--------g~g~~vvllHG~~~~~~~~~~~~~~-~~~L~~-~~~vi~~Dl~G~G~S~----~----~~~ 84 (296)
T 1j1i_A 23 AGGVETRYLEA--------GKGQPVILIHGGGAGAESEGNWRNV-IPILAR-HYRVIAMDMLGFGKTA----K----PDI 84 (296)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTTT-HHHHTT-TSEEEEECCTTSTTSC----C----CSS
T ss_pred ECCEEEEEEec--------CCCCeEEEECCCCCCcchHHHHHHH-HHHHhh-cCEEEEECCCCCCCCC----C----CCC
Confidence 47877765432 2247899999963 32222234433 345664 6999999999955432 1 111
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc-------cccccc----
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF-------NKFTIA---- 681 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~-------~~~~~~---- 681 (783)
...++++.+.+..+++.-.. .+++.|+|||+||.+++.++.++|++++++|+..|....... ......
T Consensus 85 ~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (296)
T 1j1i_A 85 EYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGM 163 (296)
T ss_dssp CCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHH
Confidence 23466666665555544222 268999999999999999999999999999988775421100 000000
Q ss_pred ccchhh-hCCCC--CHHH----------------HHHHH-h-------cCcccCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 682 YYSESE-FGSPN--NKTH----------------FHNLL-S-------YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 682 ~~~~~~-~g~p~--~~~~----------------~~~~~-~-------~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
...... +..+. ..+. +..+. . +.....+.. +++| +|+++|++|..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~Lii~G~~D~~~~~ 238 (296)
T 1j1i_A 164 VHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK----VQVP-TLVVQGKDDKVVPV 238 (296)
T ss_dssp HHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTT----CCSC-EEEEEETTCSSSCH
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhc----CCCC-EEEEEECCCcccCH
Confidence 000000 11111 1110 11000 0 001011222 6777 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
..+.++.+.+. ..++.+++++||....
T Consensus 239 ~~~~~~~~~~~-----------~~~~~~i~~~gH~~~~ 265 (296)
T 1j1i_A 239 ETAYKFLDLID-----------DSWGYIIPHCGHWAMI 265 (296)
T ss_dssp HHHHHHHHHCT-----------TEEEEEESSCCSCHHH
T ss_pred HHHHHHHHHCC-----------CCEEEEECCCCCCchh
Confidence 88877766543 2478899999998643
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.38 E-value=5.3e-11 Score=140.85 Aligned_cols=251 Identities=11% Similarity=0.035 Sum_probs=160.3
Q ss_pred EECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-------cccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 215 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-------VKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 215 ~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-------~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.++|||++++|....+|.+...||+++..+|+...++..+ ....+++|||||+.|+|+....
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~----------- 142 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN----------- 142 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-----------
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-----------
Confidence 3459999999999988877788999998887654333211 1246899999999999998542
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCC---------CCcEEEEEECCCCCCCccc
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNT---------QGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~---------~~~~l~~~dl~~g~~~~l~ 358 (783)
......|+++++.++...... ..+. .. ..++.|||||+.|++...... ...+||++++.++.
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~--~~~~-~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~----- 213 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVD--VIEG-GK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP----- 213 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSC--CBSC-CT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG-----
T ss_pred CCceEEEEEEECCCCCCcCCc--ccCc-cc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc-----
Confidence 123468999999876421000 0111 11 146899999999999876543 23679999998741
Q ss_pred CCCCceeeecCcc---ceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 359 GKFPLKTVIPGMD---HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 359 ~~~~~~~l~~~~~---~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
...+.+..... .... .|||||++|++.++.+.....|+.++..++. ++.+..... .....++ .+|+ ++
T Consensus 214 --~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~-~~~~~~~-~~g~-l~ 285 (695)
T 2bkl_A 214 --SKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD---FRLLVKGVG-AKYEVHA-WKDR-FY 285 (695)
T ss_dssp --GGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS---CEEEEECSS-CCEEEEE-ETTE-EE
T ss_pred --hhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc---eEEeecCCC-ceEEEEe-cCCc-EE
Confidence 11112222211 1122 5999999999987654345679999765544 677776653 3333334 5545 77
Q ss_pred EEEecC-CeeEEEEEECCCCce--eeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 435 VHYIQN-VRSVMDLHDLNTGKR--LHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 435 ~~~~~~-g~~~l~~~dl~~G~~--~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+....+ ...+|+++|+++++. .+.+..+ ...+.+++++ ++.+++++..-. -.+++.+++
T Consensus 286 ~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg-~~~l~~~~~ 349 (695)
T 2bkl_A 286 VLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDA-TSEVRVATL 349 (695)
T ss_dssp EEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETT-EEEEEEEET
T ss_pred EEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECC-EEEEEEEeC
Confidence 776644 357899999976652 2334332 3455556554 456776665433 356888887
|
| >3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.6e-12 Score=134.40 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=82.9
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.++.+...- ..|+||++||..+.... |... ...|.+. |.|+++|+||.|..... ...
T Consensus 17 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~~~-~~~L~~~-~~vi~~D~~G~G~S~~~--------~~~ 76 (301)
T 3kda_A 17 VDGVKLHYVKGG--------QGPLVMLVHGFGQTWYE--WHQL-MPELAKR-FTVIAPDLPGLGQSEPP--------KTG 76 (301)
T ss_dssp ETTEEEEEEEEE--------SSSEEEEECCTTCCGGG--GTTT-HHHHTTT-SEEEEECCTTSTTCCCC--------SSC
T ss_pred eCCeEEEEEEcC--------CCCEEEEECCCCcchhH--HHHH-HHHHHhc-CeEEEEcCCCCCCCCCC--------CCC
Confidence 488888766442 45799999999876644 4333 3556654 99999999996543311 223
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKY-ITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..++|+.+.+..+++. .+.++ +.++|||+||.++..++.++|++++++|+..|.
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 77 YSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp SSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred ccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 4566666666655554 23456 999999999999999999999999999998875
|
| >3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=137.57 Aligned_cols=126 Identities=13% Similarity=0.012 Sum_probs=78.6
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+...-+.+- +.+.+.||++||+++.... |......+..+.||.|+++|.||.|.....- .. ....
T Consensus 35 ~~g~~l~y~~~G~~~~--~~~g~plvllHG~~~~~~~--w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~-~~---~~~~ 106 (330)
T 3nwo_A 35 FGDHETWVQVTTPENA--QPHALPLIVLHGGPGMAHN--YVANIAALADETGRTVIHYDQVGCGNSTHLP-DA---PADF 106 (330)
T ss_dssp ETTEEEEEEEECCSSC--CTTCCCEEEECCTTTCCSG--GGGGGGGHHHHHTCCEEEECCTTSTTSCCCT-TS---CGGG
T ss_pred ecCcEEEEEEecCccC--CCCCCcEEEECCCCCCchh--HHHHHHHhccccCcEEEEECCCCCCCCCCCC-CC---cccc
Confidence 3788888776654321 1112358889998876644 3333334443249999999999955432100 00 0011
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..++++.+.+..+++. ...+++.|+|||+||.+++.++.++|+++.++|...+.
T Consensus 107 ~~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~ 160 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSP 160 (330)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCC
T ss_pred ccHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCC
Confidence 2334444433333332 12358999999999999999999999999998887654
|
| >2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-12 Score=135.60 Aligned_cols=121 Identities=12% Similarity=0.047 Sum_probs=83.4
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
+.+|.++..... ++.|+||++||..+.... |... ...|++ +|.|+++|+||.|..... .. ....
T Consensus 14 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~~-~~~l~~-~~~vi~~D~~G~G~S~~~---~~-~~~~ 77 (297)
T 2qvb_A 14 EIAGKRMAYIDE--------GKGDAIVFQHGNPTSSYL--WRNI-MPHLEG-LGRLVACDLIGMGASDKL---SP-SGPD 77 (297)
T ss_dssp EETTEEEEEEEE--------SSSSEEEEECCTTCCGGG--GTTT-GGGGTT-SSEEEEECCTTSTTSCCC---SS-CSTT
T ss_pred EECCEEEEEEec--------CCCCeEEEECCCCchHHH--HHHH-HHHHhh-cCeEEEEcCCCCCCCCCC---CC-cccc
Confidence 347877766543 235899999998776543 3332 244654 799999999995543211 00 0011
Q ss_pred cChHHHHHHHHHHHHHcCCCCC-CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
...++++.+.+..+++. .+. +++.++|||+||.+++.++.++|++++++|+..|...
T Consensus 78 ~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 78 RYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred CcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 14566766666666554 334 6899999999999999999999999999999888653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.5e-10 Score=137.98 Aligned_cols=252 Identities=11% Similarity=0.079 Sum_probs=159.1
Q ss_pred ECCCCcEEEEEEecCCCceEEEEEEECC---CCccccc------cccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVD---TGKDYPE------VLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 216 ~SPDG~~la~~~~~~G~d~~~i~v~Dl~---tg~~~~~------~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
++|||++++|....+|.+...||+++.. +++...+ +..+ ....+++|||||+.|+|+..+.
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~--------- 184 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG--------- 184 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET---------
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC---------
Confidence 4599999999999888777899999987 6654321 1111 1346899999999999998542
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC----------CcEEEEEECCCCCCC
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ----------GSDLHYFDLHSLPDG 355 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~----------~~~l~~~dl~~g~~~ 355 (783)
.....+|+++++.++..... .... ....++.|||| +.|++....... ..+||++++.++.
T Consensus 185 --G~e~~~i~v~dl~tg~~~~~-~~~~----~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~-- 254 (741)
T 1yr2_A 185 --GSDWRTVKFVGVADGKPLAD-ELKW----VKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQ-- 254 (741)
T ss_dssp --TCSEEEEEEEETTTCCEEEE-EEEE----EESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCG--
T ss_pred --CCceEEEEEEECCCCCCCCc-cCCC----ceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCc--
Confidence 11235799999987642111 1110 11136889999 999998765331 3679999997731
Q ss_pred cccCCCCceeeecCccc---eeE-EEEeeCCEEEEEECCC-CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC
Q psy2521 356 KISGKFPLKTVIPGMDH---HHE-IIANNGPELIVKTTKN-APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN 430 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~---~~~-~~s~dg~~l~~~t~~~-~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g 430 (783)
..-..+...... ... .|||||++|++.+++. .....|+.+|++++....++.+.+..+ .....+ ..++
T Consensus 255 -----~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~-~~dg 327 (741)
T 1yr2_A 255 -----SADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-AQWDFV-DGVG 327 (741)
T ss_dssp -----GGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-SCEEEE-EEET
T ss_pred -----hhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-ceEEEE-eccC
Confidence 001122222111 122 5999999999988654 235689999997752111566766553 333333 4677
Q ss_pred CEEEEEEecCC-eeEEEEEECCCC-ceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNV-RSVMDLHDLNTG-KRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g-~~~l~~~dl~~G-~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.|++....++ ..+|+++|++++ ...+.+... ...+.+++++ ++.++++...-. -..++.+|+
T Consensus 328 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg-~~~l~~~~~ 393 (741)
T 1yr2_A 328 DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDA-KSQVLAFDL 393 (741)
T ss_dssp TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETT-EEEEEEEET
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECC-EEEEEEEeC
Confidence 88998887665 578999999654 233444332 4455555544 556777665433 346888887
|
| >1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.36 E-value=7.3e-13 Score=134.92 Aligned_cols=193 Identities=14% Similarity=0.098 Sum_probs=110.5
Q ss_pred CccEEEEecCCCCCccCCc-CcHHHHHHHHcCCEEEEEecCCCCCC--------------------CChhHHhhccccCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGE--------------------LGEDWHNAGRLLKK 612 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~--------------------~G~~~~~~g~~~~~ 612 (783)
+.|+||++||..+....+. ....+...|.++||.|+.+|.++... ....|.... .
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~----~ 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHS----E 79 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCC----S
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCC----C
Confidence 5689999999766543211 11123455555699999999993211 112332210 1
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC------CceeEEEEcCCcchhhhcccccccccchh
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP------ELYGAALILVGALDMLRFNKFTIAYYSES 686 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p------~lf~a~i~~~~~~d~~~~~~~~~~~~~~~ 686 (783)
.....|+.+++++|.+.-..+..+++|+|+|+||.+++.++.+++ ..+++++...|+..............+..
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 159 (243)
T 1ycd_A 80 ISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITE 159 (243)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTSTTCEEECG
T ss_pred CcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccccccccccch
Confidence 112456666677665532223468999999999999999987642 14567777666543211100000000000
Q ss_pred hhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC
Q psy2521 687 EFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDA 766 (783)
Q Consensus 687 ~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~ 766 (783)
+ + ...+..++. +.+| +|++||.+|+.||+.++.++++.+..... ....... .+++++
T Consensus 160 ~---------~-----~~~~~~~~~----~~~P-~l~i~G~~D~~vp~~~~~~~~~~~~~~~g---~~~~~~~-~~~~~~ 216 (243)
T 1ycd_A 160 K---------F-----RDSFAVKPD----MKTK-MIFIYGASDQAVPSVRSKYLYDIYLKAQN---GNKEKVL-AYEHPG 216 (243)
T ss_dssp G---------G-----TTTTCCCTT----CCCE-EEEEEETTCSSSCHHHHHHHHHHHHHHTT---TCTTTEE-EEEESS
T ss_pred h---------H-----HHhccCccc----CCCC-EEEEEeCCCCccCHHHHHHHHHHhhhhcc---ccccccE-EEecCC
Confidence 0 1 011222222 5666 99999999999999999999998876400 0001233 355678
Q ss_pred CccCCcc
Q psy2521 767 GHGQGKA 773 (783)
Q Consensus 767 gHg~~~~ 773 (783)
||.+...
T Consensus 217 gH~~~~~ 223 (243)
T 1ycd_A 217 GHMVPNK 223 (243)
T ss_dssp SSSCCCC
T ss_pred CCcCCch
Confidence 9987543
|
| >2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-12 Score=138.31 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=87.5
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCCcee-EEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccC
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPELYG-AALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHN 708 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~-a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~ 708 (783)
..+|++||+|+|+|+||+|++.++.++|+.|+ ++++.++.......... ....+...++.+..++.+......+++..
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 84 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQY-YTSCMYNGYPSITTPTANMKSWSGNQIAS 84 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSC-GGGGSTTCCCCCHHHHHHHHHHBTTTBCC
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHH-HHHHhhccCCCCCCHHHHHHHhhcccCCh
Confidence 45899999999999999999999999999998 77666553211110000 00000000111111222221111145444
Q ss_pred CCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC--CcEEEEEeCCCCccCCcc
Q psy2521 709 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK--NPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 709 v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~--~~~~l~~~~~~gHg~~~~ 773 (783)
+.. ++.||+||+||+.|++||+.++.+++++|++. + .++++.+++++||++...
T Consensus 85 ~~~----l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~-------g~~~~ve~~~~~g~gH~~~~~ 140 (318)
T 2d81_A 85 VAN----LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNF-------DNSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp GGG----GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTT-------SCGGGEEEEEETTCCSSEEES
T ss_pred hHc----CCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhc-------CCCcceEEEEeCCCCCCCccC
Confidence 433 34456999999999999999999999999987 5 379999999999998543
|
| >1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A | Back alignment and structure |
|---|
Probab=99.35 E-value=2.3e-12 Score=134.88 Aligned_cols=120 Identities=10% Similarity=0.022 Sum_probs=83.5
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
..||.++..... ++.|+||++||..+.... |... ...|++ +|.|+++|+||.|..... .. ....
T Consensus 15 ~~~g~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~~-~~~L~~-~~~vi~~D~~G~G~S~~~---~~-~~~~ 78 (302)
T 1mj5_A 15 EIKGRRMAYIDE--------GTGDPILFQHGNPTSSYL--WRNI-MPHCAG-LGRLIACDLIGMGDSDKL---DP-SGPE 78 (302)
T ss_dssp EETTEEEEEEEE--------SCSSEEEEECCTTCCGGG--GTTT-GGGGTT-SSEEEEECCTTSTTSCCC---SS-CSTT
T ss_pred EECCEEEEEEEc--------CCCCEEEEECCCCCchhh--hHHH-HHHhcc-CCeEEEEcCCCCCCCCCC---CC-CCcc
Confidence 457888766543 235899999998776543 3322 244554 589999999995543211 00 0111
Q ss_pred cChHHHHHHHHHHHHHcCCCCC-CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
...++|+.+.+..+++. .+. +++.++|+|+||.+++.++.++|+.++++|+..|..
T Consensus 79 ~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 135 (302)
T 1mj5_A 79 RYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIA 135 (302)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECC
T ss_pred cccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccC
Confidence 24577777777666654 334 689999999999999999999999999999988765
|
| >2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.35 E-value=4.4e-12 Score=131.07 Aligned_cols=104 Identities=18% Similarity=0.126 Sum_probs=75.9
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|.||++||..+.... |... ...|++ +|.|+++|+||.|.... .. .....++++.+.+..+++. ..
T Consensus 15 ~g~~vvllHG~~~~~~~--~~~~-~~~L~~-~~~vi~~Dl~G~G~S~~---~~----~~~~~~~~~~~dl~~~l~~--l~ 81 (269)
T 2xmz_A 15 TNQVLVFLHGFLSDSRT--YHNH-IEKFTD-NYHVITIDLPGHGEDQS---SM----DETWNFDYITTLLDRILDK--YK 81 (269)
T ss_dssp CSEEEEEECCTTCCGGG--GTTT-HHHHHT-TSEEEEECCTTSTTCCC---CT----TSCCCHHHHHHHHHHHHGG--GT
T ss_pred CCCeEEEEcCCCCcHHH--HHHH-HHHHhh-cCeEEEecCCCCCCCCC---CC----CCccCHHHHHHHHHHHHHH--cC
Confidence 34569999998776654 4333 345665 69999999999654331 11 1124577777777766665 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.+++.++|||+||.+++.++.++|++++++|+..|..
T Consensus 82 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 118 (269)
T 2xmz_A 82 DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSP 118 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCS
T ss_pred CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCc
Confidence 4689999999999999999999999999999887643
|
| >2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=7.5e-12 Score=133.41 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=78.3
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
..+|.++..... +..|+||++||.++.... |.... ..|.++||.|+++|+||.|.... .. .....
T Consensus 17 ~~~g~~l~y~~~--------G~g~~vvllHG~~~~~~~--w~~~~-~~L~~~g~~via~Dl~G~G~S~~---~~-~~~~~ 81 (328)
T 2cjp_A 17 AVNGLNMHLAEL--------GEGPTILFIHGFPELWYS--WRHQM-VYLAERGYRAVAPDLRGYGDTTG---AP-LNDPS 81 (328)
T ss_dssp EETTEEEEEEEE--------CSSSEEEEECCTTCCGGG--GHHHH-HHHHTTTCEEEEECCTTSTTCBC---CC-TTCGG
T ss_pred cCCCcEEEEEEc--------CCCCEEEEECCCCCchHH--HHHHH-HHHHHCCcEEEEECCCCCCCCCC---cC-cCCcc
Confidence 347877765542 134789999998776543 54433 45555699999999999554321 10 00011
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
...++++.+.+..+++.-..+.+++.|+|||+||.+++.++.++|++++++|+..+
T Consensus 82 ~~~~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 82 KFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp GGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred cccHHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 22344444444443332111246899999999999999999999999999988653
|
| >2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=130.60 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=79.2
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChH
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 616 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~ 616 (783)
.++.+...-+. ...|.||++||.++.+.. |.... ..|++.||.|+++|+||.|... ... ......+
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~~--w~~~~-~~L~~~g~rvia~Dl~G~G~S~---~~~---~~~~~~~ 98 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSWSFL--YRKML-PVFTAAGGRVVAPDLFGFGRSD---KPT---DDAVYTF 98 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCCGGG--GTTTH-HHHHHTTCEEEEECCTTSTTSC---EES---CGGGCCH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCccee--HHHHH-HHHHhCCcEEEEeCCCCCCCCC---CCC---CcccCCH
Confidence 77766543221 115789999998776543 44433 4455569999999999955432 111 0112345
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+++.+.+..+++. .+.+++.|+|||+||.+++.++.++|++++++|+..+.
T Consensus 99 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 149 (297)
T 2xt0_A 99 GFHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTA 149 (297)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCC
Confidence 6666555555543 12358999999999999999999999999999988764
|
| >1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.34 E-value=9.9e-13 Score=149.04 Aligned_cols=222 Identities=14% Similarity=0.095 Sum_probs=138.7
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhccccCCcChH
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQNCF 616 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~~~~~~~~~ 616 (783)
+.+.++.|++...+.+.|+||++|||.... ....+.........+.|++|+.+|||.+. +|+..-+... .......+
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~~~~n~gl 164 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-NGDLNAGL 164 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-SSCTTHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccc-cCCCChhH
Confidence 456677887654456789999999985333 22334443222222469999999999532 3332211110 01223458
Q ss_pred HHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcC----CCceeEEEEcCCcchhhhcccccccc---cchh
Q psy2521 617 DDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR----PELYGAALILVGALDMLRFNKFTIAY---YSES 686 (783)
Q Consensus 617 ~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~----p~lf~a~i~~~~~~d~~~~~~~~~~~---~~~~ 686 (783)
.|+.+|++|+.++- ..||+||+|+|+|+||.+++.++... +.+|+++|+.+|..+...... .... ....
T Consensus 165 ~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~-~~~~~~~~~~~ 243 (522)
T 1ukc_A 165 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVS-EMEFQFERFVN 243 (522)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSG-GGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHH-HHHHHHHHHHH
Confidence 99999999998752 36999999999999999988877653 569999999999764322111 0000 1112
Q ss_pred hhCCCCCHHHHHHHHhcCccc------CCCCCCCCCcCCc--EEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 687 EFGSPNNKTHFHNLLSYSPLH------NIKVPPNNTQYPA--TLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 687 ~~g~p~~~~~~~~~~~~sp~~------~v~~~~~~~~~P~--~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
..|.+...+..+.|+..++.. .+..+ +...++ ++..+...|..+.+.++.++.++.+.. +.|+
T Consensus 244 ~~gc~~~~~~~~~Lr~~~~~~l~~a~~~~~~~--~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~-------~vp~ 314 (522)
T 1ukc_A 244 DTGCSSARDSLECLREQDIATIQKGNTGSPFP--GGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFI-------KVPV 314 (522)
T ss_dssp HTTCTTCSSHHHHHHHSCHHHHHHHSSCCCCT--TCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSC-------CCCE
T ss_pred HcCCCCHHHHHHHHHcCCHHHHHHHHHhcccc--ccccCcccccccccccCCcccCCCHHHHHhcCCCC-------CCCE
Confidence 335543333455566554321 00000 001111 455667788888888888877765544 7899
Q ss_pred EEEEeCCCCccCC
Q psy2521 759 LLRVEQDAGHGQG 771 (783)
Q Consensus 759 ~l~~~~~~gHg~~ 771 (783)
.+-...++||.|.
T Consensus 315 l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 315 LVGDDTDEGSNFA 327 (522)
T ss_dssp EEEEETBGGGGTS
T ss_pred EEEeecchhHHhh
Confidence 9999999999885
|
| >2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.2e-12 Score=138.24 Aligned_cols=123 Identities=11% Similarity=0.043 Sum_probs=84.1
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
..+|.++.+...-|++ ...|+||++||..+.... |.... ..|+++||.|+++|+||.|.... .. ...
T Consensus 9 ~~~g~~l~y~~~G~~~----~~~~~vv~~hG~~~~~~~--~~~~~-~~l~~~g~~vi~~d~~g~g~s~~---~~---~~~ 75 (356)
T 2e3j_A 9 NCRGTRIHAVADSPPD----QQGPLVVLLHGFPESWYS--WRHQI-PALAGAGYRVVAIDQRGYGRSSK---YR---VQK 75 (356)
T ss_dssp EETTEEEEEEEECCTT----CCSCEEEEECCTTCCGGG--GTTTH-HHHHHTTCEEEEECCTTSTTSCC---CC---SGG
T ss_pred ccCCeEEEEEEecCCC----CCCCEEEEECCCCCcHHH--HHHHH-HHHHHcCCEEEEEcCCCCCCCCC---CC---ccc
Confidence 3578888877664432 346899999998776543 33333 44555699999999999554321 10 011
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
...++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|+.++++|+..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 22455555555555443 345689999999999999999999999999998876543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-09 Score=111.89 Aligned_cols=244 Identities=12% Similarity=0.069 Sum_probs=150.9
Q ss_pred EeeEEECCCCcEEEEEEecCC--CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSG--SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G--~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
...+++||||++|+++...+. .....|+++|+++++.+...........++|+|||+.++++...
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------------- 109 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTV------------- 109 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETT-------------
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecC-------------
Confidence 457899999999966553311 12468999999999865533223334689999999988877621
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCC-------CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNG-------RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~-------~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
...|+.+++.+.... ..+..... +.....+.++|||+++++.... ....|+++|+.++.
T Consensus 110 --~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~i~~~d~~~~~-------- 175 (353)
T 3vgz_A 110 --NSAVTAIDAKTGEVK--GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG--KESVIWVVDGGNIK-------- 175 (353)
T ss_dssp --TTEEEEEETTTCCEE--EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES--SSCEEEEEETTTTE--------
T ss_pred --CCEEEEEeCCCCeeE--EEEecCCCccccccCCCCCceEEECCCCCEEEEEecC--CCceEEEEcCCCCc--------
Confidence 236888887665321 22222111 1113568999999998876532 23689999998741
Q ss_pred Cceeeec--CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC---CCCceEEEE-EEeeCCEEEE
Q psy2521 362 PLKTVIP--GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE---DENRTLDVV-AAVANNKLIV 435 (783)
Q Consensus 362 ~~~~l~~--~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~---~~~~~l~~~-~~~~g~~l~~ 435 (783)
....+. +.......|+|||+.||+... ...|+.+|+.++. ....++. ........+ ...+++.+++
T Consensus 176 -~~~~~~~~~~~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 176 -LKTAIQNTGKMSTGLALDSEGKRLYTTNA----DGELITIDTADNK---ILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp -EEEEECCCCTTCCCCEEETTTTEEEEECT----TSEEEEEETTTTE---EEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred -eEEEecCCCCccceEEECCCCCEEEEEcC----CCeEEEEECCCCe---EEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 111222 111111259999998887533 3579999987754 2222222 112223333 4445566766
Q ss_pred EEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 436 HYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.... ...|++||+.+|+.+..+..+.. ..+..+++++.++++... -..++.+|+
T Consensus 248 ~~~~--~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~---~~~v~~~d~ 301 (353)
T 3vgz_A 248 TDSK--AAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQ---AGKVSVIDA 301 (353)
T ss_dssp EESS--SSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETT---TTEEEEEET
T ss_pred EeCC--CCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECC---CCeEEEEEC
Confidence 5533 35799999988887777776532 235567888877775432 258999998
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.9e-10 Score=119.32 Aligned_cols=233 Identities=9% Similarity=0.054 Sum_probs=154.6
Q ss_pred cCCcEEeCCeEEEEEEcCCC---------CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEE-ec
Q psy2521 160 YSAPQRQENNYFYFHNKGLQ---------NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCL-SK 229 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~---------~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~-~~ 229 (783)
.+...++|+|+||.....+. +...||+.+..+++.++|.+.. +..|||+|++|+|+. +.
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-----------~~~~s~~g~~Iy~~~~~~ 125 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-----------CIYASLIGNYIYYLHYDT 125 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----------EEEEEEETTEEEEEEESS
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----------ccEEEEeCCEEEEEeecC
Confidence 44556889999999876532 2567899887555555655421 237899999999986 33
Q ss_pred CCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeE
Q psy2521 230 SGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV 309 (783)
Q Consensus 230 ~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v 309 (783)
.+. ..||.+++++.....++.... ..|+|+|+.|||+.. ...+||+.++.+.. ...|
T Consensus 126 ~~~--~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~---------------g~~~Iy~~~l~g~~--~~~l 182 (302)
T 3s25_A 126 QTA--TSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP---------------KNGQLYRYDTASQS--EALF 182 (302)
T ss_dssp SSC--EEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT---------------TTCCEEEEETTTTE--EEEE
T ss_pred CCC--ceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC---------------CCceEEEEECCCCC--EEEE
Confidence 333 789999999876555444332 346789999999972 23479999987653 3345
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEEC
Q psy2521 310 VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTT 389 (783)
Q Consensus 310 ~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~ 389 (783)
+.. ... .+ ++|+|++|+++... +...|+.++++++. ...|+.. ....|+|+|++|||.++
T Consensus 183 ~~~---~~~--~~-~~P~g~~iy~t~~~--~~~~I~~~~ldG~~---------~~~Lt~~---~~~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 183 YDC---NCY--KP-VVLDDTNVYYMDVN--RDNAIVHVNINNPN---------PVVLTEA---NIEHYNVYGSLIFYQRG 242 (302)
T ss_dssp ECS---CEE--EE-EEEETTEEEEEEGG--GTTEEEEECSSSCC---------CEECSCS---CEEEEEEETTEEEEEEC
T ss_pred eCC---Ccc--ce-eeecCCEEEEEEcC--CCcEEEEEECCCCC---------eEEEeCC---CcceEEECCCEEEEEEC
Confidence 542 222 23 56999999987654 23799999998831 2333332 12458999999999766
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeee
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
... ..|+++++++.. -+.| +.. . ...+.+++ ++|+++....+ .|+++++ +|....+|
T Consensus 243 ~~~--~~i~~~~~DG~~---r~~l-~~~--~-~~~i~i~~-d~Iy~td~~~~--~i~~~~~-dGs~~~~l 299 (302)
T 3s25_A 243 GDN--PALCVVKNDGTG---FKEL-AKG--E-FCNINVTS-QYVYFTDFVSN--KEYCTST-QNPDTIKA 299 (302)
T ss_dssp SSS--CEEEEEETTSCC---CEEE-EES--C-EEEEEECS-SEEEEEETTTC--CEEEEES-SSCCSCEE
T ss_pred CCC--cEEEEEECCCCc---cEEe-eCC--c-cceEEEeC-CEEEEEECCCC--eEEEEEC-CCCCceEe
Confidence 543 679999999865 2344 333 1 23556665 89999876554 3888887 67643333
|
| >2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2} | Back alignment and structure |
|---|
Probab=99.33 E-value=3.1e-12 Score=137.97 Aligned_cols=114 Identities=11% Similarity=0.025 Sum_probs=77.9
Q ss_pred CCccEEEEecCCCCCccCC---cCc----------HHHHHHHHcCCEEEEEecCCCCCCCChhHHh-hcc--ccCCcChH
Q psy2521 553 RRNPVIIYGYGGYGVSVLP---TFS----------ISRCMFLRHFNGIYAIPNIRGGGELGEDWHN-AGR--LLKKQNCF 616 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~---~~~----------~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~-~g~--~~~~~~~~ 616 (783)
++.|+||++||+.+..... .|. ......|.++||.|+++|+||.|.....-.. .+. ...-....
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 4578999999987765311 122 1234556667999999999995543211000 000 00112335
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCC
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVG 668 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~ 668 (783)
+|+.+++++|.++ .+.+++.++|+|+||.+++.++.++ |+.++++|+..+
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecc
Confidence 7888888888765 3457899999999999999999998 999999998854
|
| >2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=2.6e-11 Score=125.12 Aligned_cols=105 Identities=13% Similarity=0.217 Sum_probs=73.7
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+..|.||++||..+.... |.... ..|.++||.|+++|+||.|..... . .....++++.+.+..+++.-.
T Consensus 8 ~~g~~vvllHG~~~~~~~--w~~~~-~~L~~~g~~via~Dl~G~G~S~~~---~----~~~~~~~~~a~dl~~~l~~l~- 76 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAWI--WYKLK-PLLESAGHKVTAVDLSAAGINPRR---L----DEIHTFRDYSEPLMEVMASIP- 76 (264)
T ss_dssp -CCCEEEEECCTTCCGGG--GTTHH-HHHHHTTCEEEEECCTTSTTCSCC---G----GGCCSHHHHHHHHHHHHHHSC-
T ss_pred CCCCeEEEECCCccccch--HHHHH-HHHHhCCCEEEEeecCCCCCCCCC---c----ccccCHHHHHHHHHHHHHHhC-
Confidence 456889999998765533 54433 456546999999999996543311 0 112346666666555555411
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
..+++.|+||||||.++..++.++|++++++|...+
T Consensus 77 ~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~ 112 (264)
T 2wfl_A 77 PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSA 112 (264)
T ss_dssp TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESS
T ss_pred CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEee
Confidence 125899999999999999999999999999988765
|
| >2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A | Back alignment and structure |
|---|
Probab=99.33 E-value=8.3e-12 Score=130.01 Aligned_cols=125 Identities=11% Similarity=0.012 Sum_probs=81.3
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC---CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL---PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
+|.++.....-+. +...|+||++||..+.... +.|.......|++ +|.|+++|+||.|.-.. ... ...
T Consensus 19 ~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G~s~~---~~~-~~~ 89 (286)
T 2qmq_A 19 PYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQ-NFVRVHVDAPGMEEGAP---VFP-LGY 89 (286)
T ss_dssp TTEEEEEEEESCC----CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHHT-TSCEEEEECTTTSTTCC---CCC-TTC
T ss_pred CCeEEEEEeccCC----CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHhc-CCCEEEecCCCCCCCCC---CCC-CCC
Confidence 5777766654221 1246899999998766531 1122113456765 89999999999542110 000 000
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
....++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..|..
T Consensus 90 ~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 90 QYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 002466666655555543 233589999999999999999999999999999988854
|
| >3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=6.9e-12 Score=128.80 Aligned_cols=190 Identities=15% Similarity=0.084 Sum_probs=116.1
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
..+.|+||++||..+... .|.. ....|++ +|.|+++|+|| +|.+.. ......++++.+.+..+++.
T Consensus 17 ~~~~~~vv~~HG~~~~~~--~~~~-~~~~l~~-~~~v~~~d~~G---~G~s~~-----~~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 17 PDARARLVCLPHAGGSAS--FFFP-LAKALAP-AVEVLAVQYPG---RQDRRH-----EPPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp TTCSEEEEEECCTTCCGG--GGHH-HHHHHTT-TEEEEEECCTT---SGGGTT-----SCCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCceEEEeCCCCCCch--hHHH-HHHHhcc-CcEEEEecCCC---CCCCCC-----CCCCcCHHHHHHHHHHHHHh--
Confidence 356799999999866543 2433 4456664 79999999999 443322 11233566766666666554
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCc----eeEEEEcCCcchhhhccccc---cccc---chhhhC--------CCC-
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPEL----YGAALILVGALDMLRFNKFT---IAYY---SESEFG--------SPN- 692 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~l----f~a~i~~~~~~d~~~~~~~~---~~~~---~~~~~g--------~p~- 692 (783)
.+.+++.|+|||+||++++.++.++|+. +++++...+........... .... +...++ ++.
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 2457899999999999999999999985 78888776543221110000 0000 000010 000
Q ss_pred -------CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 693 -------NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 693 -------~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
....+..+..+.+... .. +.+| +|+++|++|..+++..+.++.+.+ ..++.+.++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~P-~l~i~g~~D~~~~~~~~~~~~~~~----------~~~~~~~~~~g 226 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEPG-RR----VDCP-VTVFTGDHDPRVSVGEARAWEEHT----------TGPADLRVLPG 226 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTT-CC----BSSC-EEEEEETTCTTCCHHHHHGGGGGB----------SSCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhccccccc-Cc----CCCC-EEEEecCCCCCCCHHHHHHHHHhc----------CCCceEEEecC
Confidence 0012222333333222 22 6777 999999999999987766654432 23578999998
Q ss_pred CCccCCc
Q psy2521 766 AGHGQGK 772 (783)
Q Consensus 766 ~gHg~~~ 772 (783)
||.+..
T Consensus 227 -gH~~~~ 232 (267)
T 3fla_A 227 -GHFFLV 232 (267)
T ss_dssp -STTHHH
T ss_pred -Cceeec
Confidence 998643
|
| >1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=2.9e-11 Score=125.53 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=74.4
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... |... ...|++.||.|+.+|+||.|..... .....+++++.+.+..+++.-. ..
T Consensus 4 ~~~vvllHG~~~~~~~--w~~~-~~~L~~~g~rVia~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHGGWS--WYKL-KPLLEAAGHKVTALDLAASGTDLRK-------IEELRTLYDYTLPLMELMESLS-AD 72 (273)
T ss_dssp CCEEEEECCTTCCGGG--GTTH-HHHHHHTTCEEEECCCTTSTTCCCC-------GGGCCSHHHHHHHHHHHHHTSC-SS
T ss_pred CCeEEEECCCCCCcch--HHHH-HHHHHhCCCEEEEecCCCCCCCccC-------cccccCHHHHHHHHHHHHHHhc-cC
Confidence 3789999998765533 5443 3556556999999999996543211 1112357777776666665421 13
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+++.|+||||||+++..++.++|++++++|...+.
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~ 107 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 107 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEecc
Confidence 58999999999999999999999999999887653
|
| >1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A | Back alignment and structure |
|---|
Probab=99.31 E-value=8.2e-12 Score=120.86 Aligned_cols=154 Identities=14% Similarity=-0.013 Sum_probs=105.5
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCE---EEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG---IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
.|+||++||..+.... |.. +...|.++|| .|+.+|+||.|... . ..++++.+.++.++++
T Consensus 3 ~~~vv~~HG~~~~~~~--~~~-~~~~l~~~G~~~~~v~~~d~~g~g~s~---~---------~~~~~~~~~~~~~~~~-- 65 (181)
T 1isp_A 3 HNPVVMVHGIGGASFN--FAG-IKSYLVSQGWSRDKLYAVDFWDKTGTN---Y---------NNGPVLSRFVQKVLDE-- 65 (181)
T ss_dssp CCCEEEECCTTCCGGG--GHH-HHHHHHHTTCCGGGEEECCCSCTTCCH---H---------HHHHHHHHHHHHHHHH--
T ss_pred CCeEEEECCcCCCHhH--HHH-HHHHHHHcCCCCccEEEEecCCCCCch---h---------hhHHHHHHHHHHHHHH--
Confidence 4789999998765533 443 4455666798 59999999955322 1 2345666666666554
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCC
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNI 709 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v 709 (783)
.+.+++.++|||+||.++..++.++ |+.++++|+..|......... . +. .
T Consensus 66 ~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~------~------~~----------------~ 117 (181)
T 1isp_A 66 TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA------L------PG----------------T 117 (181)
T ss_dssp HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC------C------CC----------------S
T ss_pred cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc------C------CC----------------C
Confidence 2456899999999999999999887 889999999998765422100 0 00 0
Q ss_pred CCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 710 KVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 710 ~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
... ...| +|+++|++|..|++..+. + ...++.+++++||.+...
T Consensus 118 ~~~---~~~p-~l~i~G~~D~~v~~~~~~-----~-----------~~~~~~~~~~~gH~~~~~ 161 (181)
T 1isp_A 118 DPN---QKIL-YTSIYSSADMIVMNYLSR-----L-----------DGARNVQIHGVGHIGLLY 161 (181)
T ss_dssp CTT---CCCE-EEEEEETTCSSSCHHHHC-----C-----------BTSEEEEESSCCTGGGGG
T ss_pred CCc---cCCc-EEEEecCCCccccccccc-----C-----------CCCcceeeccCchHhhcc
Confidence 000 2344 999999999999987431 1 123678899999986543
|
| >3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-11 Score=125.32 Aligned_cols=99 Identities=15% Similarity=0.105 Sum_probs=68.9
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|+||++||..+.... |... ...|++ .|.|+++|+||.|.... . ....++++.+.+..+++. ..
T Consensus 15 ~~~~vvllHG~~~~~~~--w~~~-~~~L~~-~~~via~Dl~G~G~S~~---~------~~~~~~~~a~dl~~~l~~--l~ 79 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLDN--LGVL-ARDLVN-DHNIIQVDVRNHGLSPR---E------PVMNYPAMAQDLVDTLDA--LQ 79 (255)
T ss_dssp CCCCEEEECCTTCCTTT--THHH-HHHHTT-TSCEEEECCTTSTTSCC---C------SCCCHHHHHHHHHHHHHH--HT
T ss_pred CCCCEEEEcCCcccHhH--HHHH-HHHHHh-hCcEEEecCCCCCCCCC---C------CCcCHHHHHHHHHHHHHH--cC
Confidence 45789999998776643 4443 355665 59999999999554321 1 023345554444444332 12
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
.+++.++|||+||.+++.++.++|++++++|+..
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 113 (255)
T 3bf7_A 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEc
Confidence 3589999999999999999999999999988753
|
| >1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.1e-11 Score=129.16 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=79.8
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChH
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 616 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~ 616 (783)
.++.+...-+. ...|.||++||.++.+.. |.... ..|++.||.|+++|.||.|... ... ......+
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~~~~--w~~~~-~~L~~~g~rvia~Dl~G~G~S~---~~~---~~~~y~~ 99 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTWSYL--YRKMI-PVFAESGARVIAPDFFGFGKSD---KPV---DEEDYTF 99 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCCGGG--GTTTH-HHHHHTTCEEEEECCTTSTTSC---EES---CGGGCCH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCchhh--HHHHH-HHHHhCCCeEEEeCCCCCCCCC---CCC---CcCCcCH
Confidence 77776654321 114789999998776654 44433 4455568999999999954332 111 0112346
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+++.+.+..|++. .+.+++.++|||+||.++..++.++|++++++|+..+.
T Consensus 100 ~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~ 150 (310)
T 1b6g_A 100 EFHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAX 150 (310)
T ss_dssp HHHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccc
Confidence 6666555555543 12358999999999999999999999999999887764
|
| >2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=130.97 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=83.0
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEec----CCCCCCCChh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPN----IRGGGELGED 602 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~----~RG~g~~G~~ 602 (783)
+.+.+.. | ..+....+.|. .+..|+||++||..+....+.+.......|. .||.|+.+| +||.|...
T Consensus 16 ~~~~~~~-~-~~~~y~~~g~~----~~~~~~vvllHG~~~~~~~~~~~~~l~~~L~-~g~~Vi~~Dl~~D~~G~G~S~-- 86 (335)
T 2q0x_A 16 HLFTYYK-D-PYCKIPVFMMN----MDARRCVLWVGGQTESLLSFDYFTNLAEELQ-GDWAFVQVEVPSGKIGSGPQD-- 86 (335)
T ss_dssp EEEEEEE-E-TTEEEEEEEEC----TTSSSEEEEECCTTCCTTCSTTHHHHHHHHT-TTCEEEEECCGGGBTTSCSCC--
T ss_pred EEEecCC-C-CceeEEEeccC----CCCCcEEEEECCCCccccchhHHHHHHHHHH-CCcEEEEEeccCCCCCCCCcc--
Confidence 3444443 3 44555444331 2345889999996554333333233445564 699999995 47744322
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh--cCCCceeEEEEcCCcch
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLN--QRPELYGAALILVGALD 671 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~--~~p~lf~a~i~~~~~~d 671 (783)
. ....+|+.+.+++|.+. .+.+++.|+||||||.+++.++. .+|+.++++|+..|..+
T Consensus 87 -~--------~~~~~d~~~~~~~l~~~--l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 87 -H--------AHDAEDVDDLIGILLRD--HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp -H--------HHHHHHHHHHHHHHHHH--SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred -c--------cCcHHHHHHHHHHHHHH--cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 1 12357888888988774 34578999999999999999988 57999999999887643
|
| >3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ... | Back alignment and structure |
|---|
Probab=99.29 E-value=2.3e-11 Score=125.03 Aligned_cols=103 Identities=12% Similarity=0.122 Sum_probs=73.7
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.||++||....... |.... ..|+++||.|+.+|+||.|..... .....+++++.+.+..+++.-. ..
T Consensus 3 ~~~vvllHG~~~~~~~--w~~~~-~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTICHGAWI--WHKLK-PLLEALGHKVTALDLAASGVDPRQ-------IEEIGSFDEYSEPLLTFLEALP-PG 71 (257)
T ss_dssp CCEEEEECCTTCCGGG--GTTHH-HHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHTHHHHHHHHTSC-TT
T ss_pred CCcEEEEcCCccCcCC--HHHHH-HHHHhCCCEEEEeCCCCCCCCCCC-------cccccCHHHHHHHHHHHHHhcc-cc
Confidence 3679999998755433 54433 556556999999999996543211 0112457777777666666421 12
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++.++||||||+++..++.++|++++++|...+
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~ 105 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNS 105 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEec
Confidence 5899999999999999999999999999987655
|
| >1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11 | Back alignment and structure |
|---|
Probab=99.29 E-value=9.2e-11 Score=123.06 Aligned_cols=117 Identities=11% Similarity=0.056 Sum_probs=81.3
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+... +..|.||++||.++.+.. |... ...|++ .|.|+++|.||.|..... .......
T Consensus 16 ~~g~~l~y~~~--------G~g~~lvllHG~~~~~~~--w~~~-~~~L~~-~~~via~Dl~G~G~S~~~----~~~~~~~ 79 (294)
T 1ehy_A 16 LPDVKIHYVRE--------GAGPTLLLLHGWPGFWWE--WSKV-IGPLAE-HYDVIVPDLRGFGDSEKP----DLNDLSK 79 (294)
T ss_dssp CSSCEEEEEEE--------ECSSEEEEECCSSCCGGG--GHHH-HHHHHT-TSEEEEECCTTSTTSCCC----CTTCGGG
T ss_pred ECCEEEEEEEc--------CCCCEEEEECCCCcchhh--HHHH-HHHHhh-cCEEEecCCCCCCCCCCC----ccccccC
Confidence 47887766542 134789999998776543 5443 355665 599999999995543311 1000012
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 80 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 80 YSLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp GCHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 3466776666666654 2335899999999999999999999999999998775
|
| >3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.8e-11 Score=130.15 Aligned_cols=115 Identities=15% Similarity=0.143 Sum_probs=81.6
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+... + +++.|.||++||.++.... |.... ..|++ +|.|+++|+||.|.... ....
T Consensus 14 ~~g~~l~y~~~---G---~g~~~pvvllHG~~~~~~~--w~~~~-~~L~~-~~~via~Dl~G~G~S~~--------~~~~ 75 (316)
T 3afi_E 14 VLGSSMAYRET---G---AQDAPVVLFLHGNPTSSHI--WRNIL-PLVSP-VAHCIAPDLIGFGQSGK--------PDIA 75 (316)
T ss_dssp ETTEEEEEEEE---S---CTTSCEEEEECCTTCCGGG--GTTTH-HHHTT-TSEEEEECCTTSTTSCC--------CSSC
T ss_pred eCCEEEEEEEe---C---CCCCCeEEEECCCCCchHH--HHHHH-HHHhh-CCEEEEECCCCCCCCCC--------CCCC
Confidence 36777765543 2 1333589999998877654 44433 45664 69999999999554321 1123
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.+++++.+.+..|++. ...+++.|+|+|+||.+++.++.++|++++++|+..+
T Consensus 76 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 76 YRFFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 4577777777666665 2336899999999999999999999999999988764
|
| >1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=9.8e-12 Score=128.73 Aligned_cols=191 Identities=15% Similarity=0.145 Sum_probs=112.0
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... |... ...|++ +|.|+++|+||.|.....-. ......+++++.+.+..+++. .+.
T Consensus 20 ~~~vvllHG~~~~~~~--w~~~-~~~L~~-~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~a~dl~~~l~~--l~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGCDQSV--WNAV-APAFEE-DHRVILFDYVGSGHSDLRAY----DLNRYQTLDGYAQDVLDVCEA--LDL 89 (271)
T ss_dssp SSEEEEECCTTCCGGG--GTTT-GGGGTT-TSEEEECCCSCCSSSCCTTC----CTTGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCcEEEEcCCCCchhh--HHHH-HHHHHh-cCeEEEECCCCCCCCCCCcc----cccccccHHHHHHHHHHHHHH--cCC
Confidence 3789999997665543 3332 244654 89999999999654331100 001112455555555555443 234
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh----cc-ccc-------------ccccchh-----hhCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR----FN-KFT-------------IAYYSES-----EFGSP 691 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~----~~-~~~-------------~~~~~~~-----~~g~p 691 (783)
+++.++|||+||.+++.++.++|++++++|+..+...... +. .+. ....|.. .++.+
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999999999998876321100 00 000 0001111 11222
Q ss_pred CCHHHHHH----HHhcCc---------------ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 692 NNKTHFHN----LLSYSP---------------LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 692 ~~~~~~~~----~~~~sp---------------~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
..++..+. +....| ...++. +++| +|+++|++|..+++..+..+.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lvi~G~~D~~~~~~~~~~~~~~~~------- 237 (271)
T 1wom_A 170 DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSK----VTVP-SLILQCADDIIAPATVGKYMHQHLP------- 237 (271)
T ss_dssp TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTT----CCSC-EEEEEEETCSSSCHHHHHHHHHHSS-------
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccc----cCCC-EEEEEcCCCCcCCHHHHHHHHHHCC-------
Confidence 22211111 111111 111222 6777 9999999999999887766655442
Q ss_pred CCCCcEEEEEeCCCCccCC
Q psy2521 753 YQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg~~ 771 (783)
..++.+++++||...
T Consensus 238 ----~~~~~~i~~~gH~~~ 252 (271)
T 1wom_A 238 ----YSSLKQMEARGHCPH 252 (271)
T ss_dssp ----SEEEEEEEEESSCHH
T ss_pred ----CCEEEEeCCCCcCcc
Confidence 257888899999864
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-09 Score=112.98 Aligned_cols=247 Identities=11% Similarity=0.076 Sum_probs=141.6
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-ccccccccccCe-eEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLKNVKFPS-ISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~~~~~~~-~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
.++|||||++|+++.... ..|+++|+++++. ............ ++|+|||+.|+ +... ...
T Consensus 44 ~~~~s~dg~~l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~------------~~~ 106 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFC----QTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTG------------LNH 106 (331)
T ss_dssp EEEECSSSCEEEEEESTT----CEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCC------------SSS
T ss_pred eEEEcCCCCEEEEEeCCC----CeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecC------------CCC
Confidence 899999999877665432 3799999999986 332222222345 89999999888 4411 112
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG- 369 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~- 369 (783)
...|+++++.+... +..+..... ...+.|+|||++|++..... ...|+++++... +.+. ... ...+..
T Consensus 107 ~~~i~v~d~~~~~~--~~~~~~~~~---~~~~~~spdg~~l~~~~~~~--~~~i~~~~~~~~--g~~~-~~~-~~~~~~~ 175 (331)
T 3u4y_A 107 PFNMQSYSFLKNKF--ISTIPIPYD---AVGIAISPNGNGLILIDRSS--ANTVRRFKIDAD--GVLF-DTG-QEFISGG 175 (331)
T ss_dssp SCEEEEEETTTTEE--EEEEECCTT---EEEEEECTTSSCEEEEEETT--TTEEEEEEECTT--CCEE-EEE-EEEECSS
T ss_pred cccEEEEECCCCCe--EEEEECCCC---ccceEECCCCCEEEEEecCC--CceEEEEEECCC--CcEe-ecC-CccccCC
Confidence 23788998876432 222332222 25789999999987664431 233777776541 1110 000 111221
Q ss_pred ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
.......|+|||+++|+.... ...|..+|+.++........++.. .........++++.|++... +...|.++|
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~--~~~~i~~~d 249 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLI---GNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE--STVDVFNFN 249 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETT---TTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS--SEEEEEEEE
T ss_pred CCccceEECCCCCEEEEEeCC---CCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc--CCCEEEEEE
Confidence 111122599999988886643 346889998765521103334433 22222234445455665543 345699999
Q ss_pred CCCCce--eeeec----CC---CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 450 LNTGKR--LHSFP----LD---LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 450 l~~G~~--~~~l~----~~---~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+|+. +..+. .. ......+.++++++.++++... -..+..+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v~v~d~ 302 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANI---SRELKVFTI 302 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETT---TTEEEEEET
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCC---CCcEEEEEe
Confidence 977775 22221 11 1111235677888888775433 347888998
|
| >3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-10 Score=121.62 Aligned_cols=124 Identities=19% Similarity=0.143 Sum_probs=82.6
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
++..+.+.+|.++.+...-+++ +.|+||++||..+.... |.. ....|++ ||.|+++|+||.|.... ..
T Consensus 6 ~~~~~~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~~~~--~~~-~~~~L~~-~~~vi~~Dl~G~G~S~~---~~ 73 (285)
T 3bwx_A 6 EDRYWTSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRNARD--FED-LATRLAG-DWRVLCPEMRGRGDSDY---AK 73 (285)
T ss_dssp EEEEEECTTSCEEEEEEECBCT-----TSCCEEEECCTTCCGGG--GHH-HHHHHBB-TBCEEEECCTTBTTSCC---CS
T ss_pred ccCeeecCCCceEEEEEcCCCC-----CCCcEEEECCCCcchhh--HHH-HHHHhhc-CCEEEeecCCCCCCCCC---CC
Confidence 3455677899988877654321 25789999998765543 443 3456665 99999999999554321 10
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
......++++.+.+..+++. ...+++.++|||+||.++..++.++|++++++|+..
T Consensus 74 ---~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 74 ---DPMTYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp ---SGGGCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred ---CccccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 01112344444433333332 123589999999999999999999999999998753
|
| >1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26 | Back alignment and structure |
|---|
Probab=99.26 E-value=7.4e-12 Score=128.43 Aligned_cols=95 Identities=16% Similarity=0.089 Sum_probs=68.3
Q ss_pred cc-EEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 555 NP-VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 555 ~P-~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
.| .||++||..+.... |... ...|++ ||.|+++|+||.|..... ...+++++ ++.+++. .+
T Consensus 12 g~~~vvllHG~~~~~~~--w~~~-~~~L~~-~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~~--l~ 73 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAEV--WRCI-DEELSS-HFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQQ--AP 73 (258)
T ss_dssp CSSEEEEECCTTCCGGG--GGGT-HHHHHT-TSEEEEECCTTSTTCCSC---------CCCCHHHH---HHHHHTT--SC
T ss_pred CCCeEEEECCCCCChHH--HHHH-HHHhhc-CcEEEEeeCCCCCCCCCC---------CCcCHHHH---HHHHHHH--hC
Confidence 35 89999997665543 4443 345664 899999999995543311 12345554 3445443 34
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++.|+|||+||.++..++.++|++++++|...+
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 107 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVAS 107 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECC
Confidence 7899999999999999999999999999998654
|
| >1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13 | Back alignment and structure |
|---|
Probab=99.26 E-value=4.1e-11 Score=125.93 Aligned_cols=104 Identities=16% Similarity=0.194 Sum_probs=76.3
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcC--CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 629 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~ 629 (783)
.+..|.||++||..+.... |.. ....|.++ ||.|+.+|+||.|. ..... ...++|+.+.+..+++.
T Consensus 33 ~~~~~~vvllHG~~~~~~~--~~~-~~~~L~~~~~g~~vi~~D~~G~G~---s~~~~------~~~~~~~~~~l~~~~~~ 100 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSYS--FRH-LLEYINETHPGTVVTVLDLFDGRE---SLRPL------WEQVQGFREAVVPIMAK 100 (302)
T ss_dssp --CCCCEEEECCTTCCGGG--GHH-HHHHHHHHSTTCCEEECCSSCSGG---GGSCH------HHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEECCCCCChhH--HHH-HHHHHHhcCCCcEEEEeccCCCcc---chhhH------HHHHHHHHHHHHHHhhc
Confidence 3556889999998766543 444 34556666 89999999999543 22111 13567777777777765
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCCcc
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGAL 670 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~~~ 670 (783)
. .+++.++|||+||+++..++.++|+ .++++|+..|..
T Consensus 101 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 101 A---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp C---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred C---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 4 4689999999999999999999999 689998887644
|
| >3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-11 Score=123.79 Aligned_cols=116 Identities=14% Similarity=0.045 Sum_probs=83.5
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~ 614 (783)
+|.++.....-+ ...|+||++||..+.... |... ...|++ +|.|+++|+||.|.... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~~~~--~~~~-~~~L~~-~~~v~~~D~~G~G~S~~--------~~~~~ 68 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQDHRL--FKNL-APLLAR-DFHVICPDWRGHDAKQT--------DSGDF 68 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCCGGG--GTTH-HHHHTT-TSEEEEECCTTCSTTCC--------CCSCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCcHhH--HHHH-HHHHHh-cCcEEEEccccCCCCCC--------Ccccc
Confidence 677766544321 235899999998776644 4443 355664 79999999999554331 12334
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCCcc
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVGAL 670 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~~~ 670 (783)
.++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..|..
T Consensus 69 ~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 69 DSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp CHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred CHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 566777666666654 2345899999999999999999999 99999999988755
|
| >3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A | Back alignment and structure |
|---|
Probab=98.90 E-value=5.8e-13 Score=139.25 Aligned_cols=121 Identities=11% Similarity=0.066 Sum_probs=79.7
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.++..... ++.|+||++||..+.... |.. ....|+ +||.|+++|+||.|... ..........
T Consensus 12 ~~g~~~~~~~~--------g~~p~vv~lHG~~~~~~~--~~~-~~~~l~-~g~~v~~~D~~G~G~s~---~~~~~~~~~~ 76 (304)
T 3b12_A 12 VGDVTINCVVG--------GSGPALLLLHGFPQNLHM--WAR-VAPLLA-NEYTVVCADLRGYGGSS---KPVGAPDHAN 76 (304)
Confidence 37776654431 245889999998765543 333 235566 59999999999954332 2110000122
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
..++++.+.+..+++. .+.+++.++|||+||.++..++.++|+.++++|+..|...
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 77 YSFRAMASDQRELMRT--LGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 2344444444444433 2446899999999999999999999999999999887654
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.20 E-value=5.5e-09 Score=110.62 Aligned_cols=244 Identities=13% Similarity=0.065 Sum_probs=143.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccc-----cccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKN-----VKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~-----~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
...++|||||++++++.... ..|+++|+.+++.+... ... .....++|+|||+.|++........
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~----- 106 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLE----- 106 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEEC-----
T ss_pred ccceEEcCCCCEEEEEeCCC----CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccc-----
Confidence 45689999999987776432 46999999999865422 211 1346899999999998876321000
Q ss_pred ccccc--CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 285 ETTAH--MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 285 ~~~~~--~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
.... ....|+++++.+.. .+..+.....+ ..+.|||||++|++. . ..|+++|+.++..
T Consensus 107 -~~~~~~~~~~i~v~d~~~~~--~~~~~~~~~~~---~~~~~s~dg~~l~~~--~----~~i~~~d~~~~~~-------- 166 (337)
T 1pby_B 107 -LTHFEVQPTRVALYDAETLS--RRKAFEAPRQI---TMLAWARDGSKLYGL--G----RDLHVMDPEAGTL-------- 166 (337)
T ss_dssp -SSCEEECCCEEEEEETTTTE--EEEEEECCSSC---CCEEECTTSSCEEEE--S----SSEEEEETTTTEE--------
T ss_pred -cccccccCceEEEEECCCCc--EEEEEeCCCCc---ceeEECCCCCEEEEe--C----CeEEEEECCCCcE--------
Confidence 0001 24578899886542 22223322222 357899999998876 1 4799999987410
Q ss_pred ceeeecCc-cceeEEEEeeCCEEEEEECCCCC--------------------CceEEEEcCCCCCCCCcEEeecCCCCce
Q psy2521 363 LKTVIPGM-DHHHEIIANNGPELIVKTTKNAP--------------------KGKVVTINLNNPCEKNWKTLIPEDENRT 421 (783)
Q Consensus 363 ~~~l~~~~-~~~~~~~s~dg~~l~~~t~~~~~--------------------~~~L~~~d~~~~~~~~~~~li~~~~~~~ 421 (783)
...+..+. .... .|+|||+.+++....+.. ...|+.+|+.+++.. ...+-+.. ...
T Consensus 167 ~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~-~~~ 243 (337)
T 1pby_B 167 VEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMD-VFY 243 (337)
T ss_dssp EEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECS-SCE
T ss_pred eeeeeccccCCCc-eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCC-Cce
Confidence 11111111 1111 478898877654322110 115788898776521 11111111 222
Q ss_pred EEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 422 LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 422 l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
....+..+++.+++. ...|++||+.+++.+..+..+. .+.++.++++++.+++. +. ...++.+|+
T Consensus 244 ~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~~--~~~i~v~d~ 308 (337)
T 1pby_B 244 FSTAVNPAKTRAFGA-----YNVLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLG--GA--LGDLAAYDA 308 (337)
T ss_dssp EEEEECTTSSEEEEE-----ESEEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEE--SB--SSEEEEEET
T ss_pred eeEEECCCCCEEEEe-----CCeEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEE--cC--CCcEEEEEC
Confidence 222333454566655 2579999998888766666542 23355677888877765 22 468999999
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-08 Score=108.33 Aligned_cols=260 Identities=8% Similarity=0.057 Sum_probs=133.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc---cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
...++|||||+ |+++...+ +...|+++|+++|+...... .......++|+|||+.|++....
T Consensus 42 p~~~a~spdg~-l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------------ 106 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------------ 106 (347)
T ss_dssp CCCEEECTTCE-EEEEEEET--TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------------
T ss_pred cceEEEccCCe-EEEEEecC--CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------------
Confidence 34689999999 54443322 23689999998886433221 22334689999999998877622
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCC---C------CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC-CCCCCcc
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPN---G------RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-SLPDGKI 357 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~---~------~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~-~g~~~~l 357 (783)
...+.++++..... ...+..... . ......+.|||||+ +++.. . ....|+++++. +| .+
T Consensus 107 ---~~~v~v~~~~~~g~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~-~--~~~~v~~~~~~~~g---~~ 175 (347)
T 3hfq_A 107 ---KGTAEVMKIAADGA-LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID-L--GSDKVYVYNVSDAG---QL 175 (347)
T ss_dssp ---TTEEEEEEECTTSC-EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE-T--TTTEEEEEEECTTS---CE
T ss_pred ---CCEEEEEEeCCCCC-eeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe-C--CCCEEEEEEECCCC---cE
Confidence 23566666643211 111211110 0 11234689999999 55432 2 23688899887 32 11
Q ss_pred cCCCCceeee--cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCC--CCCCCCcEEeecCCCC----ceEEEE-EEe
Q psy2521 358 SGKFPLKTVI--PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTLIPEDEN----RTLDVV-AAV 428 (783)
Q Consensus 358 ~~~~~~~~l~--~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~--~~~~~~~~~li~~~~~----~~l~~~-~~~ 428 (783)
. ...... .+.......|+|||+.+|+....+ ..+..++++ ++.......+...... .....+ +.+
T Consensus 176 ~---~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 176 S---EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS---SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp E---EEEEEECCTTCCEEEEEECTTSSEEEEEETTT---TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred E---EeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 0 011111 111111125999999888765442 234444443 3331111111111111 122333 445
Q ss_pred eCCEEEEEEecCCeeEEEEEECC-CCc--eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCC
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDLN-TGK--RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDD 505 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl~-~G~--~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~ 505 (783)
+|+.|++....+ ..|.+|++. +|+ .+..+......+..+.++++++.+++.-.. ..--.+|.+|. ++|
T Consensus 250 dG~~l~v~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~d~-----~tg- 320 (347)
T 3hfq_A 250 DGHFLYVSNRGY--NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQN-TDNATLYARDL-----TSG- 320 (347)
T ss_dssp TSCEEEEEEETT--TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETT-TTEEEEEEECT-----TTC-
T ss_pred CCCEEEEEeCCC--CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcC-CCcEEEEEEeC-----CCC-
Confidence 555677766554 357777774 332 223333321223456678888877765432 22234555576 566
Q ss_pred CceEEEe
Q psy2521 506 FKPTIFR 512 (783)
Q Consensus 506 ~~~~~~~ 512 (783)
+.+.+.
T Consensus 321 -~l~~~~ 326 (347)
T 3hfq_A 321 -KLSLLQ 326 (347)
T ss_dssp -CEEEEE
T ss_pred -eEEecc
Confidence 444433
|
| >4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.9e-11 Score=123.79 Aligned_cols=228 Identities=13% Similarity=0.089 Sum_probs=132.6
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcC-----CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCC--CC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGAL-----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIR--GG 596 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~-----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~R--G~ 596 (783)
...++++.|. -|..+.+.++.|+++. .+++.|+|.+.||..+....+.-......++++.|.+++.++.. +-
T Consensus 13 ~~~~~~~~S~~l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~ 92 (299)
T 4fol_A 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGD 92 (299)
T ss_dssp EEEEEEEECTTTSSEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCST
T ss_pred EEEEEEEECcccCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCccee
Confidence 5677777774 6789999999998863 35679999999998765433221222446666779999988742 10
Q ss_pred C-------CC----ChhHHhhcccc--CCcChHHHHHH--HHHHHHH-------cCCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 597 G-------EL----GEDWHNAGRLL--KKQNCFDDFQA--AAEYMIN-------KKYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 597 g-------~~----G~~~~~~g~~~--~~~~~~~D~~a--~~~~l~~-------~~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
. .+ +..|+...... .+...+.|++. .+.++.+ +...++++.+|.|+||||+-++.++.
T Consensus 93 ~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al 172 (299)
T 4fol_A 93 EVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYL 172 (299)
T ss_dssp TSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHH
T ss_pred ecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHH
Confidence 0 00 11111110000 01122333331 2222222 22345678999999999999999887
Q ss_pred cC--CCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCccc---CCCCCCCCCcCCcEEEEecCCC
Q psy2521 655 QR--PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLH---NIKVPPNNTQYPATLVLTGDHD 729 (783)
Q Consensus 655 ~~--p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~---~v~~~~~~~~~P~~Li~~g~~D 729 (783)
++ |+.|+++.+.+|.++........ ......+|.... ....+++.. +.+. ...|+++|.+|+.|
T Consensus 173 ~~~~~~~~~~~~s~s~~~~p~~~~~~~--~~~~~~~g~~~~-----~~~~~d~~~l~~~~~~----~~~~~i~id~G~~D 241 (299)
T 4fol_A 173 KGYSGKRYKSCSAFAPIVNPSNVPWGQ--KAFKGYLGEEKA-----QWEAYDPCLLIKNIRH----VGDDRILIHVGDSD 241 (299)
T ss_dssp HTGGGTCCSEEEEESCCCCGGGSHHHH--HHHHHHTC----------CGGGCHHHHGGGSCC----CTTCCEEEEEETTC
T ss_pred hCCCCCceEEEEecccccCcccccccc--cccccccccchh-----hhhhcCHHHHHHhccc----CCCCceEEEecCCC
Confidence 74 77999999999988764321100 001112233211 122333332 2222 23456999999999
Q ss_pred CCCCcH-HHHHHHHHHHhhhCCCCCCCCc--EEEEEeCCCCccC
Q psy2521 730 DRVPPL-HSYKFIATLQEKIGSLPYQKNP--LLLRVEQDAGHGQ 770 (783)
Q Consensus 730 ~~V~~~-~~~~~~~~L~~~~~~~~~~~~~--~~l~~~~~~gHg~ 770 (783)
....-. ++..|.++++++ |.+ ++++..+|.+|..
T Consensus 242 ~f~~~~l~~~~f~~a~~~~-------g~~~~~~~r~~~GydHsy 278 (299)
T 4fol_A 242 PFLEEHLKPELLLEAVKAT-------SWQDYVEIKKVHGFDHSY 278 (299)
T ss_dssp TTHHHHTCTHHHHHHHTTS-------TTTTCEEEEEETTCCSSH
T ss_pred cchhhhcCHHHHHHHHHhc-------CCCceEEEEeCCCCCCCH
Confidence 765322 245788888776 655 8899999889973
|
| >3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-11 Score=128.07 Aligned_cols=219 Identities=12% Similarity=0.046 Sum_probs=110.2
Q ss_pred CeEEEEEEECCCCcE-EEEEEEEecCcC------CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC
Q psy2521 524 FQTKQVYFRSKDGTR-VPMYIIHRVGAL------RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~-v~~~~~~p~~~~------~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
..++.+.|++.++.. ...++..+.... .....|+||++||..+.... |.. ....|.+ ||.|+++|+||.
T Consensus 13 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvllHG~~~~~~~--~~~-l~~~L~~-~~~v~~~D~~G~ 88 (280)
T 3qmv_A 13 LGTENLYFQSNALLSQRSAWFPRPVAAPAAEPPDPAAAPLRLVCFPYAGGTVSA--FRG-WQERLGD-EVAVVPVQLPGR 88 (280)
T ss_dssp ---------------CHHHHSCCCCCCCCCCCCCTTTCSEEEEEECCTTCCGGG--GTT-HHHHHCT-TEEEEECCCTTS
T ss_pred cCcceeeeecchhhhhcchheecCCCCCcccccccCCCCceEEEECCCCCChHH--HHH-HHHhcCC-CceEEEEeCCCC
Confidence 356778888777632 222332221100 01123889999998766543 443 3456765 999999999994
Q ss_pred CCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCcee----EEEEcCCcc-h
Q psy2521 597 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYG----AALILVGAL-D 671 (783)
Q Consensus 597 g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~----a~i~~~~~~-d 671 (783)
|.+... .....++++.+.+..+++.- ...+++.|+|||+||.++..++.++|+... .++...... .
T Consensus 89 ---G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~ 159 (280)
T 3qmv_A 89 ---GLRLRE-----RPYDTMEPLAEAVADALEEH-RLTHDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPH 159 (280)
T ss_dssp ---GGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCSSSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGG
T ss_pred ---CCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCCCCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCC
Confidence 432111 12234556655554444431 134689999999999999999998887655 444433211 1
Q ss_pred hhhccc---cccc--ccchhhhC-CCCC---------------HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCC
Q psy2521 672 MLRFNK---FTIA--YYSESEFG-SPNN---------------KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDD 730 (783)
Q Consensus 672 ~~~~~~---~~~~--~~~~~~~g-~p~~---------------~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~ 730 (783)
...... .... ..+...++ .+.. ...+.....+.+. .... +.+| +|+++|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----i~~P-~l~i~G~~D~ 233 (280)
T 3qmv_A 160 LYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRRLPVLRADLRACERYDWH-PRPP----LDCP-TTAFSAAADP 233 (280)
T ss_dssp GCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTTHHHHHHHHHHHHTCCCC-CCCC----BCSC-EEEEEEEECS
T ss_pred CcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHHHHHHHHHHHHHHhcccc-CCCc----eecC-eEEEEecCCC
Confidence 111000 0000 00011111 1110 0112222233321 1222 6777 9999999999
Q ss_pred CCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 731 RVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 731 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
.+++..+.++.+.+ .....+.++++ ||....
T Consensus 234 ~~~~~~~~~~~~~~----------~~~~~~~~~~g-gH~~~~ 264 (280)
T 3qmv_A 234 IATPEMVEAWRPYT----------TGSFLRRHLPG-NHFFLN 264 (280)
T ss_dssp SSCHHHHHTTGGGB----------SSCEEEEEEEE-ETTGGG
T ss_pred CcChHHHHHHHHhc----------CCceEEEEecC-CCeEEc
Confidence 99987766554332 23467777764 998754
|
| >2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A | Back alignment and structure |
|---|
Probab=99.18 E-value=7.6e-11 Score=125.35 Aligned_cols=115 Identities=15% Similarity=0.094 Sum_probs=80.7
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+... + .++.|.||++||..+.... |... ...|++ .|.|+++|+||.|..... ....
T Consensus 28 ~~g~~l~y~~~---G---~g~~~~vvllHG~~~~~~~--w~~~-~~~L~~-~~~via~Dl~GhG~S~~~-------~~~~ 90 (318)
T 2psd_A 28 VLDSFINYYDS---E---KHAENAVIFLHGNATSSYL--WRHV-VPHIEP-VARCIIPDLIGMGKSGKS-------GNGS 90 (318)
T ss_dssp ETTEEEEEEEC---C---SCTTSEEEEECCTTCCGGG--GTTT-GGGTTT-TSEEEEECCTTSTTCCCC-------TTSC
T ss_pred eCCeEEEEEEc---C---CCCCCeEEEECCCCCcHHH--HHHH-HHHhhh-cCeEEEEeCCCCCCCCCC-------CCCc
Confidence 47777655432 2 2345789999998776543 3332 244554 579999999995543211 1122
Q ss_pred ChHHHHHHHHHHHHHcCCCCC-CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKP-KYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
..++++.+.+..+++. .+. +++.|+|||+||.+++.++.++|++++++|+..
T Consensus 91 ~~~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~ 143 (318)
T 2psd_A 91 YRLLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHME 143 (318)
T ss_dssp CSHHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEec
Confidence 4577888777777765 334 689999999999999999999999999998854
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.9e-09 Score=114.96 Aligned_cols=249 Identities=6% Similarity=0.032 Sum_probs=143.4
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCc-eEEEEEEECCCCccccccc-----cccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSD-WNTLHIKDVDTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d-~~~i~v~Dl~tg~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
.-.+..++|||||++||-+.+....- ...|++++..+++...... .......++|+||++ ++....
T Consensus 42 ~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~------- 113 (357)
T 4g56_B 42 EVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASD------- 113 (357)
T ss_dssp CSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEET-------
T ss_pred cCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEEC-------
Confidence 34688999999999999776543322 2579999988876432211 111235789999986 433431
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
...|.++++.++.......+...........+.|+|||++|+.... ...|.++|+.++.
T Consensus 114 ---------dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~----dg~v~iwd~~~~~-------- 172 (357)
T 4g56_B 114 ---------SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK----DFSVKVWDLSQKA-------- 172 (357)
T ss_dssp ---------TSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET----TSCEEEEETTTTE--------
T ss_pred ---------CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC----CCeEEEEECCCCc--------
Confidence 1247777776654322222222222234568899999999875432 2578999998731
Q ss_pred CceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEEe
Q psy2521 362 PLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYI 438 (783)
Q Consensus 362 ~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~ 438 (783)
....+....... . .|+++++.+++.... ++.|..+|+.++... ..+........+..+.+ ++++.+++...
T Consensus 173 -~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 173 -VLKSYNAHSSEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp -EEEEECCCSSCEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred -EEEEEcCCCCCEEEEEEccCCCceeeeecc---CCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEee
Confidence 111222222222 2 478888766555443 245888888765421 11111111233334433 34456676666
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++ .|.+||+.+++.++.+....+.|..+.+++++..++++.+.- .++..+|+
T Consensus 247 ~d~--~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D---~~i~iwd~ 299 (357)
T 4g56_B 247 ETG--NVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISED---CTVAVLDA 299 (357)
T ss_dssp SSS--CEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT---SCEEEECT
T ss_pred ccc--ceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC---CEEEEEEC
Confidence 654 588999988887777776666677888888877666555432 46889998
|
| >1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17 | Back alignment and structure |
|---|
Probab=99.17 E-value=1.6e-11 Score=139.81 Aligned_cols=228 Identities=16% Similarity=0.152 Sum_probs=135.9
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHH--HHHH-HcCCEEEEEecCCCCCCCChhHHhh--
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISR--CMFL-RHFNGIYAIPNIRGGGELGEDWHNA-- 606 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~--~~~l-~~~G~~v~~~~~RG~g~~G~~~~~~-- 606 (783)
+.|. +.+.++.|++....++.|+|||+|||...... ..|.... ...+ ...|++|+.+|||.+. +| |...
T Consensus 102 sedc--l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~g--f~~~~~ 176 (544)
T 1thg_A 102 NEDC--LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FG--FLGGDA 176 (544)
T ss_dssp CSCC--CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSHH
T ss_pred CCCC--eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-cc--CCCccc
Confidence 3454 44556778765445678999999998543322 2343221 1112 2348999999999754 22 1100
Q ss_pred -ccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--------CCceeEEEEcCCcchhhh
Q psy2521 607 -GRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLR 674 (783)
Q Consensus 607 -g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~lf~a~i~~~~~~d~~~ 674 (783)
.....+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++... +.+|+++|+.+|......
T Consensus 177 ~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~ 256 (544)
T 1thg_A 177 ITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYH 256 (544)
T ss_dssp HHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCS
T ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccC
Confidence 00112334589999999999875 236999999999999999998887652 458999999998542211
Q ss_pred cccc-cccc---cchhhhCCCCCH---HHHHHHHhcCcccCCCCCC-----CCCcCCc-EEEEecCCCCCCCcHHHHHHH
Q psy2521 675 FNKF-TIAY---YSESEFGSPNNK---THFHNLLSYSPLHNIKVPP-----NNTQYPA-TLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 675 ~~~~-~~~~---~~~~~~g~p~~~---~~~~~~~~~sp~~~v~~~~-----~~~~~P~-~Li~~g~~D~~V~~~~~~~~~ 741 (783)
.... .... ......|.+... +..+.|+..++..-+.... ....+++ .+......|..+.+.+..++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~ 336 (544)
T 1thg_A 257 DSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELF 336 (544)
T ss_dssp SSCCSSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSCHHHHH
T ss_pred cCChHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcCHHHHH
Confidence 1100 0011 112334655322 4556677665432111100 0000000 112334567778888888777
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 742 ~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
++.+.. ++|+++-...++||.|..
T Consensus 337 ~~g~~~-------~vp~l~G~~~~Eg~~f~~ 360 (544)
T 1thg_A 337 RSGRYA-------KVPYISGNQEDEGTAFAP 360 (544)
T ss_dssp HTTCSC-------CCCEEEEEETBTTTTTGG
T ss_pred hcCCCC-------CccEEEEeecCchhhhcc
Confidence 665544 789999999999998853
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.16 E-value=8.8e-09 Score=109.21 Aligned_cols=241 Identities=11% Similarity=0.085 Sum_probs=137.8
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
..++++++++..+...+ .+|+++|+++|+.+.... +.... .++|+|||+.++.+... ..
T Consensus 3 ~~~~~~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---------------~~ 62 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHL----RRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---------------CQ 62 (331)
T ss_dssp ----CCCCEEEEEEGGG----TEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---------------TC
T ss_pred eeEcCCCCEEEEEecCC----CeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---------------CC
Confidence 45677888766554432 379999999998754332 22233 88999999988877621 23
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEE-EEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLH-SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~-~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
.|+.+++.+.... .........+ .. +.+||||++|+ ..........|+++|+.++. ....+..+..
T Consensus 63 ~i~~~d~~~~~~~-~~~~~~~~~~---~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~--------~~~~~~~~~~ 129 (331)
T 3u4y_A 63 TLVQIETQLEPPK-VVAIQEGQSS---MADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNK--------FISTIPIPYD 129 (331)
T ss_dssp EEEEEECSSSSCE-EEEEEECSSC---CCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTE--------EEEEEECCTT
T ss_pred eEEEEECCCCcee-EEecccCCCC---ccceEECCCCCEEE-EecCCCCcccEEEEECCCCC--------eEEEEECCCC
Confidence 7899988765421 2222222222 34 78999999998 33222122389999998741 0111212212
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCC-CCc-EEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE-KNW-KTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~-~~~-~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
.....|+|||++||+....+ .. .|..++++.... ... ..+++.. .......+..+++.+++....+ ..|.+||
T Consensus 130 ~~~~~~spdg~~l~~~~~~~-~~-~i~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~--~~v~v~d 204 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSS-AN-TVRRFKIDADGVLFDTGQEFISGG-TRPFNITFTPDGNFAFVANLIG--NSIGILE 204 (331)
T ss_dssp EEEEEECTTSSCEEEEEETT-TT-EEEEEEECTTCCEEEEEEEEECSS-SSEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred ccceEECCCCCEEEEEecCC-Cc-eEEEEEECCCCcEeecCCccccCC-CCccceEECCCCCEEEEEeCCC--CeEEEEE
Confidence 22226999999888754432 22 144444443221 000 2233333 2233333444545677765544 4799999
Q ss_pred CCCCce---eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 450 LNTGKR---LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 450 l~~G~~---~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+++. +..++.+ ..+..+..+++++.++++.. ....++.+|+
T Consensus 205 ~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~---~~~~i~~~d~ 250 (331)
T 3u4y_A 205 TQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE---STVDVFNFNQ 250 (331)
T ss_dssp CSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS---SEEEEEEEET
T ss_pred CCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc---CCCEEEEEEC
Confidence 988886 6666543 23345667889887876543 3356999999
|
| >1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=9.1e-12 Score=141.42 Aligned_cols=222 Identities=18% Similarity=0.152 Sum_probs=132.4
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHH--H-HHHHcCCEEEEEecCCCCC-CCC--hhHHhhccccC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISR--C-MFLRHFNGIYAIPNIRGGG-ELG--EDWHNAGRLLK 611 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~--~-~~l~~~G~~v~~~~~RG~g-~~G--~~~~~~g~~~~ 611 (783)
+.+.++.|++....++.|+||++|||....... .+.... . .+..+.|++|+.+|||.+. +|. .+... ...
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~---~~~ 174 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKA---EGS 174 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHH---HTC
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccc---cCC
Confidence 455677887654456789999999985433222 233221 1 1222358999999999743 111 11111 122
Q ss_pred CcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--------CCceeEEEEcCCcchhhhccc-cc
Q psy2521 612 KQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGALDMLRFNK-FT 679 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~lf~a~i~~~~~~d~~~~~~-~~ 679 (783)
....+.|+.+|++|+.++ -..||+||+|+|+|+||.+++.++... +.+|+++|+.+|......... ..
T Consensus 175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~~~~~~~~~~~ 254 (534)
T 1llf_A 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTY 254 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSCCCCCTTSHH
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCcccCCCcChHH
Confidence 334589999999999875 236999999999999999988877653 558999999998432111100 00
Q ss_pred cc---ccchhhhCCCCCHHHHHHHHhcCcccCCCC----CCCCCcCC-cEEEEecCCCCCCCcHHHHHHHHHHHhhhCCC
Q psy2521 680 IA---YYSESEFGSPNNKTHFHNLLSYSPLHNIKV----PPNNTQYP-ATLVLTGDHDDRVPPLHSYKFIATLQEKIGSL 751 (783)
Q Consensus 680 ~~---~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~----~~~~~~~P-~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 751 (783)
.. .......|.+...+..+.|+..++-.-+.. +. ...+. ..+......|..+.+.+..++.++.+..
T Consensus 255 ~~~~~~~~~~~~gc~~~~~~l~cLr~~~~~~l~~a~~~~~~-~~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~g~~~---- 329 (534)
T 1llf_A 255 GNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATNNTPG-FLAYSSLRLSYLPRPDGKNITDDMYKLVRDGKYA---- 329 (534)
T ss_dssp HHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHHHTSCC-TTSTTTTSCSSCCCCCSSSSCSCHHHHHHTTCSC----
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHHHcCCHHHHHHHHHhccc-ccccccccccceeecCCccccCCHHHHHHcCCCC----
Confidence 00 011233465543345566666554321100 00 00000 0122234457778888887776655444
Q ss_pred CCCCCcEEEEEeCCCCccCC
Q psy2521 752 PYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~gHg~~ 771 (783)
++|+++-...++||.|.
T Consensus 330 ---~vp~l~G~~~~Eg~~f~ 346 (534)
T 1llf_A 330 ---SVPVIIGDQNDEGTIFG 346 (534)
T ss_dssp ---CCCEEEEEETBTTHHHH
T ss_pred ---CCCEEEEEecCchhhhh
Confidence 78999999999999874
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.16 E-value=4.5e-09 Score=125.15 Aligned_cols=259 Identities=9% Similarity=0.014 Sum_probs=158.4
Q ss_pred CCcE-EeCCeEEEEEEcCCCCeeEEEEEeCCCC-CeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEE
Q psy2521 161 SAPQ-RQENNYFYFHNKGLQNHSILYVQRNLTG-STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238 (783)
Q Consensus 161 ~~p~-~~G~~~yy~~~~~~~~~~~l~~~~~~~g-~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~ 238 (783)
..++ ++|.+++|.....+..+..||+++..++ + .+.+ .+ ....++++|||||+.|+|+.........+||
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~--~l~~--~~----~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ--TIAD--KV----SGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC--CCCC--CE----EEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE--eCCc--cc----cCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 3567 8899999999887777889999987555 3 2211 11 1124579999999999999865433346899
Q ss_pred EEECCCCcccc-ccc--c-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc--eeEEec
Q psy2521 239 IKDVDTGKDYP-EVL--K-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD--IPVVEF 312 (783)
Q Consensus 239 v~Dl~tg~~~~-~~~--~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d--~~v~~~ 312 (783)
++++.++.... ... . .....++.|||||+.|+|+... ....+||+.++.++..+. +.+...
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~-------------~~~~~l~~~d~~~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS-------------PETAEVHLLDLRKGNAHNTLEIVRPR 317 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEEC-------------SSCEEEEEEESSSCTTCCCEEESSCC
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecC-------------CCCceEEEEECCCCCCCceeEEeecC
Confidence 99998875321 111 1 1123578999999999999842 124589999998753333 333332
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecC-CCCcEEEEEECCCCCCCcccCCCCcee-eecCccc-eeEEEEeeCCEEEEEEC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNN-TQGSDLHYFDLHSLPDGKISGKFPLKT-VIPGMDH-HHEIIANNGPELIVKTT 389 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~-~~~~~l~~~dl~~g~~~~l~~~~~~~~-l~~~~~~-~~~~~s~dg~~l~~~t~ 389 (783)
..... .++.| .+|++|+|.++.. .....|+.+|++++ ..+.. ++..... ....++++++.|++...
T Consensus 318 ~~~~~--~s~~~-~~g~~l~~~t~~~~a~~~~L~~~d~~~~--------~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~ 386 (751)
T 2xe4_A 318 EKGVR--YDVQM-HGTSHLVILTNEGGAVNHKLLIAPRGQP--------SDWSHVLVDHSEDVFMESIAVRSNYLVVAGR 386 (751)
T ss_dssp CTTCC--EEEEE-ETTTEEEEEECTTTCTTCEEEEEETTST--------TCCCCEEECCCSSEEEEEEEECSSEEEEEEE
T ss_pred CCCce--EEEee-eeCCEEEEEeCCCCCCCcEEEEEcCCCc--------ccceeeEECCCCCcEEEEEEEECCEEEEEEE
Confidence 22221 12222 2388888887764 34579999998751 11344 4433222 33457778889998877
Q ss_pred CCCCCceEEEEcC-------CCCCCCCcEEeecCCCCceEEEEE-----EeeCCEEEEEEec-CCeeEEEEEECCCCce
Q psy2521 390 KNAPKGKVVTINL-------NNPCEKNWKTLIPEDENRTLDVVA-----AVANNKLIVHYIQ-NVRSVMDLHDLNTGKR 455 (783)
Q Consensus 390 ~~~~~~~L~~~d~-------~~~~~~~~~~li~~~~~~~l~~~~-----~~~g~~l~~~~~~-~g~~~l~~~dl~~G~~ 455 (783)
.++ ..+|+.+++ +++. ..+.+......... .+. ..+++.+++.+.. .....++.+|+.+|+.
T Consensus 387 ~~g-~~~l~~~dl~~~~~~~~~g~--~~~~l~l~~~~~~~-~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 387 RAG-LTRIWTMMADSQDGVFKAGT--GLREVVMEEPIFTV-HLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp ETT-EEEEEEEECCTTTSCCCTTT--CCEECCCCCSSCEE-EECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred eCC-EEEEEEEecccccccccCCc--cceEECCCCceeEE-EeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 654 457999986 3322 02444222212222 221 1244566666554 4557899999976763
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.15 E-value=2.7e-08 Score=109.74 Aligned_cols=280 Identities=11% Similarity=0.032 Sum_probs=166.3
Q ss_pred CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc
Q psy2521 167 ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK 246 (783)
Q Consensus 167 G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~ 246 (783)
++.+++....+ ..+++.+..+++....+....+. .....+..++|+|||+.++-.. ....|+++|+++++
T Consensus 133 ~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~-----~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQM-----QANAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEG-----GGTEEEEEETTTCC
T ss_pred CCeEEEEeCCC----CeEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEEC-----CCCEEEEEECCCce
Confidence 56666654322 12444444344444433332221 1233577889999998665432 22479999999987
Q ss_pred cccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEe
Q psy2521 247 DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT 325 (783)
Q Consensus 247 ~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~S 325 (783)
.+.... .......++|+||++.++++... ...|+++++.+.. .+...+... ....+.|+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~i~~~d~~~~~----~~~~~~~~~-~~~~~~~~ 262 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWI---------------SEDISVIDRKTKL----EIRKTDKIG-LPRGLLLS 262 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETT---------------TTEEEEEETTTTE----EEEECCCCS-EEEEEEEC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecC---------------CCcEEEEECCCCc----EEEEecCCC-CceEEEEc
Confidence 654222 22233578999999988877621 2368888886542 232222222 34678999
Q ss_pred cCCcEEEEEEecCC----CCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEE
Q psy2521 326 DCGRYLLVSTSNNT----QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTI 400 (783)
Q Consensus 326 pDGk~l~~~~~~~~----~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~ 400 (783)
|||++|++...... ....|+++|+.++. ............ ..|+|+|+.+++.... ...|..+
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~v~v~ 330 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEK---------LIDTIGPPGNKRHIVSGNTENKIYVSDMC---CSKIEVY 330 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---------EEEEEEEEECEEEEEECSSTTEEEEEETT---TTEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCc---------EEeeccCCCCcceEEECCCCCEEEEEecC---CCEEEEE
Confidence 99999987764321 13589999998741 111121111111 2589999988887554 3469999
Q ss_pred cCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe------------eEEEEEECCCCceeeeecCCCeEEEe
Q psy2521 401 NLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR------------SVMDLHDLNTGKRLHSFPLDLGQITH 468 (783)
Q Consensus 401 d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~------------~~l~~~dl~~G~~~~~l~~~~g~v~~ 468 (783)
|+.++. ....++.. ..+....+..+++.+++....+.. ..|++||+.+++.+..+... ..+..
T Consensus 331 d~~~~~---~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~ 405 (433)
T 3bws_A 331 DLKEKK---VQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTG 405 (433)
T ss_dssp ETTTTE---EEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEE
T ss_pred ECCCCc---EEEEecCC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCce
Confidence 987654 33344433 333333334444556665554332 38999999888876666653 34567
Q ss_pred eeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 469 ISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 469 ~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.++++++.+++..+. -..++.|++
T Consensus 406 ~~~s~dg~~l~~~~~~---d~~i~v~~~ 430 (433)
T 3bws_A 406 LDVSPDNRYLVISDFL---DHQIRVYRR 430 (433)
T ss_dssp EEECTTSCEEEEEETT---TTEEEEEEE
T ss_pred EEEcCCCCEEEEEECC---CCeEEEEEe
Confidence 7788888777654321 246777776
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.14 E-value=6.1e-08 Score=103.71 Aligned_cols=247 Identities=8% Similarity=-0.013 Sum_probs=149.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..++|||||++|+.+... ..|++||+.+++.+...........+.|+||++.|+....+. ..
T Consensus 76 ~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------~~ 139 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNV-----------MK 139 (369)
T ss_dssp CEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCB-----------TT
T ss_pred cEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCc-----------cC
Confidence 47889999999999866432 469999999998665433333346899999999888877321 11
Q ss_pred CCceEEEEEcCCCCCCceeE---------EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPV---------VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v---------~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
....|.++++.+......+. ............+.|+|||++|+.... ...|+++|+.++ .
T Consensus 140 ~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~-------~ 208 (369)
T 3zwl_B 140 NPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK----DGKISKYDVSNN-------Y 208 (369)
T ss_dssp BCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET----TSEEEEEETTTT-------T
T ss_pred CCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC----CCEEEEEECCCC-------c
Confidence 23456677665543221111 111111113467899999999886533 258999999762 0
Q ss_pred CCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 361 FPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 361 ~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
. ............ . .|+|+++.|+..+. .+.|..+|+.++. ....+... .......+..++..+++...
T Consensus 209 ~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~---~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 209 E-YVDSIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTLQ---VLKKYETD-CPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp E-EEEEEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC---EEEEEECS-SCEEEEEECSSSSEEEEEEC
T ss_pred E-eEEEEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCCc---eeeeecCC-CCceeEEecCCCceEEEeec
Confidence 1 111222222222 2 58999988876554 2468889987754 23333332 23333334444344444433
Q ss_pred cC-----------CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QN-----------VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~-----------g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+ +...+.+||+.+++.+..+....+.+..+.+++++..++. .+. -..+..||+
T Consensus 280 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~---dg~v~iw~~ 344 (369)
T 3zwl_B 280 QEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS-GGE---DGFIRLHHF 344 (369)
T ss_dssp CC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE-EET---TSEEEEEEE
T ss_pred CCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE-EcC---CCeEEEEEC
Confidence 22 2237899999888877777666667888888888875553 222 357888887
|
| >2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2.3e-11 Score=137.17 Aligned_cols=221 Identities=19% Similarity=0.156 Sum_probs=129.8
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCC---CCccCCcCcHHHHHHHHcCC-EEEEEecCCCCC-CCChhHHhh-
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFN-GIYAIPNIRGGG-ELGEDWHNA- 606 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~---~~~~~~~~~~~~~~~l~~~G-~~v~~~~~RG~g-~~G~~~~~~- 606 (783)
+.|+.. +.++.|+. ..++.|+||++|||. +......+.. ..|+++| ++|+.+|||.+. +|+..-...
T Consensus 81 ~edcl~--l~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~ 153 (498)
T 2ogt_A 81 SEDGLY--LNIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDG---TAFAKHGDVVVVTINYRMNVFGFLHLGDSFG 153 (498)
T ss_dssp BSCCCE--EEEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCC---HHHHHHHTCEEEEECCCCHHHHCCCCTTTTC
T ss_pred CCCCcE--EEEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCH---HHHHhCCCEEEEeCCCcCchhhccCchhhcc
Confidence 455544 45556753 356789999999986 3333333333 2333345 999999999421 232111100
Q ss_pred -ccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchhhhcccc--
Q psy2521 607 -GRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKF-- 678 (783)
Q Consensus 607 -g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~~~~~~~-- 678 (783)
.....+...+.|++++++|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|..+.......
T Consensus 154 ~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~ 233 (498)
T 2ogt_A 154 EAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPETA 233 (498)
T ss_dssp GGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTTTCBCHHHH
T ss_pred ccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCccccccCHHHH
Confidence 011223345899999999998752 36999999999999999998888753 4689999999997762111000
Q ss_pred -cccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCc
Q psy2521 679 -TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNP 757 (783)
Q Consensus 679 -~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 757 (783)
..........|.+. +..+.|++.++..-+.... .+. | .+.....-|..+.+.+..++.+.-+.. +.|
T Consensus 234 ~~~~~~~~~~~gc~~--~~~~~Lr~~~~~~l~~~~~-~~~-~-~~~f~PvvDg~~lp~~p~~~~~~g~~~-------~vp 301 (498)
T 2ogt_A 234 MAMTERILDKAGIRP--GDRERLLSIPAEELLRAAL-SLG-P-GVMYGPVVDGRVLRRHPIEALRYGAAS-------GIP 301 (498)
T ss_dssp HHHHHHHHHHHTCCT--TCHHHHHHSCHHHHHHHHH-TTT-T-SCCCCCBCCSSSCCSCHHHHHHTTTTT-------TCC
T ss_pred HHHHHHHHHHhCCCH--HHHHHHHcCCHHHHHHHHh-hcc-C-CCceeeeeCCcccccCHHHHHhcCCCC-------CCC
Confidence 00111223446543 2345556555432111100 000 1 112223446667777776655443333 789
Q ss_pred EEEEEeCCCCccCCc
Q psy2521 758 LLLRVEQDAGHGQGK 772 (783)
Q Consensus 758 ~~l~~~~~~gHg~~~ 772 (783)
+++-...++|+.+..
T Consensus 302 ~liG~~~~Eg~~f~~ 316 (498)
T 2ogt_A 302 ILIGVTKDEYNLFTL 316 (498)
T ss_dssp EEEEEETTHHHHTTT
T ss_pred EEEEEeccchhhhhc
Confidence 999999999998764
|
| >1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.3e-10 Score=117.91 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=71.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.... |... ...|++.||.|+.+|+||.|.... .. ...++|+.+.+..+++.-..++
T Consensus 16 ~~~vvllHG~~~~~~~--w~~~-~~~L~~~~~~vi~~Dl~GhG~S~~---~~------~~~~~~~a~~l~~~l~~l~~~~ 83 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGAD--WQPV-LSHLARTQCAALTLDLPGHGTNPE---RH------CDNFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp BCEEEEECCTTCCGGG--GHHH-HHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTT
T ss_pred CCcEEEEcCCCCCHHH--HHHH-HHHhcccCceEEEecCCCCCCCCC---CC------ccCHHHHHHHHHHHHHHhCcCC
Confidence 4889999998776643 4443 455663599999999999654331 11 1245666666666665533332
Q ss_pred CcEEEEEeChhHHHHHH---HHhcCCCceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGA---CLNQRPELYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~---~~~~~p~lf~a~i~~~~~ 669 (783)
.++.|+||||||.+++. ++.++|+.++++|...+.
T Consensus 84 ~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred CceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 24999999999999999 778899999999887653
|
| >3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.8e-10 Score=117.25 Aligned_cols=118 Identities=13% Similarity=-0.053 Sum_probs=87.7
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--------CCCCCCChhHHhhcc
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--------RGGGELGEDWHNAGR 608 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------RG~g~~G~~~~~~g~ 608 (783)
..+++.|+.|++. .++.|+||-+||+. +. +. +||+++.+|+ ||+.++|.-+...+.
T Consensus 90 ~~~~~~i~lP~~~--~~p~Pvii~i~~~~-------~~------~~-~G~a~~~~~~~~v~~~~~~gs~g~g~f~~ly~~ 153 (375)
T 3pic_A 90 ISFTVTITYPSSG--TAPYPAIIGYGGGS-------LP------AP-AGVAMINFNNDNIAAQVNTGSRGQGKFYDLYGS 153 (375)
T ss_dssp EEEEEEEECCSSS--CSSEEEEEEETTCS-------SC------CC-TTCEEEEECHHHHSCCSSGGGTTCSHHHHHHCT
T ss_pred eEEEEEEECCCCC--CCCccEEEEECCCc-------cc------cC-CCeEEEEecccccccccCCCCccceecccccCC
Confidence 4578899999863 47889999998841 11 33 5999999997 666667763322221
Q ss_pred c-cCCcCh--HHHHHHHHHHHHHcC--CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 609 L-LKKQNC--FDDFQAAAEYMINKK--YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 609 ~-~~~~~~--~~D~~a~~~~l~~~~--~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
. .++... .=|+..+++||.... .+|++||+|+|+|+||..+++++...+ +++++|+.++..+
T Consensus 154 ~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D~-Ri~~~v~~~~g~~ 220 (375)
T 3pic_A 154 SHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFEK-RIVLTLPQESGAG 220 (375)
T ss_dssp TCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHCT-TEEEEEEESCCTT
T ss_pred ccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcCC-ceEEEEeccCCCC
Confidence 1 111111 137889999999987 899999999999999999999999876 7899999887553
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-08 Score=106.36 Aligned_cols=236 Identities=12% Similarity=0.110 Sum_probs=145.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..+.++|+++.++-+.. ..+|++||+.+|+.+... ........++|+|||+.|+....
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~-----D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~------------- 142 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSL-----DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTH------------- 142 (321)
T ss_dssp SCEEEEEECSSSSEEEEEET-----TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECT-------------
T ss_pred CCEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcC-------------
Confidence 44778899999998775432 257999999998765422 22223357999999998876552
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...+.++++.+.. ....+... ......+.|+|||++|+....+ ..|.++|+.++. ....+
T Consensus 143 ---dg~v~i~~~~~~~--~~~~~~~~--~~~v~~~~~spdg~~lasg~~d----g~i~iwd~~~~~---------~~~~~ 202 (321)
T 3ow8_A 143 ---VGKVNIFGVESGK--KEYSLDTR--GKFILSIAYSPDGKYLASGAID----GIINIFDIATGK---------LLHTL 202 (321)
T ss_dssp ---TSEEEEEETTTCS--EEEEEECS--SSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---------EEEEE
T ss_pred ---CCcEEEEEcCCCc--eeEEecCC--CceEEEEEECCCCCEEEEEcCC----CeEEEEECCCCc---------EEEEE
Confidence 2367788887643 22223322 2345688999999999865432 578999998741 11122
Q ss_pred cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+.... .. .|+|+|+.|+..+. ...|..+|+..+. ....+......+. .+.+..++.++++...++ .|
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~----dg~i~iwd~~~~~---~~~~~~~h~~~v~-~~~~sp~~~~l~s~s~D~--~v 272 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASD----DGYIKIYDVQHAN---LAGTLSGHASWVL-NVAFCPDDTHFVSSSSDK--SV 272 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECT----TSCEEEEETTTCC---EEEEECCCSSCEE-EEEECTTSSEEEEEETTS--CE
T ss_pred cccCCceeEEEEcCCCCEEEEEcC----CCeEEEEECCCcc---eeEEEcCCCCceE-EEEECCCCCEEEEEeCCC--cE
Confidence 222222 22 59999887664332 2458888887654 2223332223333 444433355566666664 68
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+.+++.+..+....+.|..+.+++++..++ +.+. -.++..+|.
T Consensus 273 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-s~~~---d~~i~vwd~ 319 (321)
T 3ow8_A 273 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIV-SVGD---DQEIHIYDC 319 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE-EEET---TCCEEEEEC
T ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-EEeC---CCeEEEEeC
Confidence 8999988887777766556677888888877654 3222 235666664
|
| >3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.1e-11 Score=125.92 Aligned_cols=103 Identities=16% Similarity=0.041 Sum_probs=73.5
Q ss_pred ccEEEEecC-CCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 555 NPVIIYGYG-GYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 555 ~P~ll~~hG-g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
.|+||++|| |...+ ...|.. ....|. .||.|+++|+||.|... ........++|+...+..+++.- .
T Consensus 41 ~p~vv~lHG~G~~~~-~~~~~~-~~~~L~-~~~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~~~--~ 108 (292)
T 3l80_A 41 NPCFVFLSGAGFFST-ADNFAN-IIDKLP-DSIGILTIDAPNSGYSP-------VSNQANVGLRDWVNAILMIFEHF--K 108 (292)
T ss_dssp SSEEEEECCSSSCCH-HHHTHH-HHTTSC-TTSEEEEECCTTSTTSC-------CCCCTTCCHHHHHHHHHHHHHHS--C
T ss_pred CCEEEEEcCCCCCcH-HHHHHH-HHHHHh-hcCeEEEEcCCCCCCCC-------CCCcccccHHHHHHHHHHHHHHh--C
Confidence 489999997 32221 123433 234455 59999999999955332 01122346778888777777652 3
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.+++.|+|||+||.++..++.++|++++++|...|.
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 109 FQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 458999999999999999999999999999998843
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.5e-08 Score=104.36 Aligned_cols=247 Identities=9% Similarity=0.066 Sum_probs=144.3
Q ss_pred EEeeEEECCCCcEEEEEEecCCCce-EEEEEEECCCCccccc----cc-cccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDW-NTLHIKDVDTGKDYPE----VL-KNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~-~~i~v~Dl~tg~~~~~----~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
.+..++|||||++|+-+.+..+.-| ..+++++......... .. .......++|+||+ .|+....
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~--------- 101 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD--------- 101 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET---------
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC---------
Confidence 4788999999999986664433322 2455554322211110 00 11123578999986 4554441
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
...|.++++.++.......+....+......+.|+|||++|+....+ ..|.++|+.++. .
T Consensus 102 -------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d----~~i~iwd~~~~~---------~ 161 (344)
T 4gqb_B 102 -------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD----ICIKVWDLAQQV---------V 161 (344)
T ss_dssp -------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---------E
T ss_pred -------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----CeEEEEECCCCc---------E
Confidence 23688888877643322222211222345688999999998754322 578999998741 1
Q ss_pred eeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEE-EeeCCEEEEEEecC
Q psy2521 364 KTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA-AVANNKLIVHYIQN 440 (783)
Q Consensus 364 ~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~-~~~g~~l~~~~~~~ 440 (783)
...+.+..... . .|++++..+++....+ ..|..+|+.++.. ...+........+..+. ..+++.+++....+
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTRCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETTSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccc---cccccccccccce--eeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 11222323222 2 5889987776655443 3588889876552 23333222233333333 33446677777766
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+ .|.+||+.+++.+..+....+.|..+.++|++..++++.+.- .++..+|+
T Consensus 237 g--~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D---~~i~vwd~ 287 (344)
T 4gqb_B 237 G--TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED---CSLAVLDS 287 (344)
T ss_dssp S--EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT---SCEEEECT
T ss_pred C--cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC---CeEEEEEC
Confidence 5 688999988888777776666677888888887666655433 46889998
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.09 E-value=3.8e-08 Score=108.57 Aligned_cols=241 Identities=15% Similarity=0.143 Sum_probs=146.8
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc------cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL------KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..++||| ++.++++...+ ..|+++|+++|+.+.... .......++|+|||+ ++++...
T Consensus 126 ~~~~~s~-~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~---------- 189 (433)
T 3bws_A 126 KSVRFID-NTRLAIPLLED----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQ---------- 189 (433)
T ss_dssp CCCEESS-SSEEEEEBTTS----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGG----------
T ss_pred eEEEEeC-CCeEEEEeCCC----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-EEEEECC----------
Confidence 3688999 55555554433 349999999998654211 111224689988875 4445421
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|+++++.+.. ....+... ......+.|+|||+++++.... ...|+++|+.++. ...
T Consensus 190 -----d~~v~~~d~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~d~~~~~---------~~~ 248 (433)
T 3bws_A 190 -----ANAVHVFDLKTLA--YKATVDLT--GKWSKILLYDPIRDLVYCSNWI---SEDISVIDRKTKL---------EIR 248 (433)
T ss_dssp -----GTEEEEEETTTCC--EEEEEECS--SSSEEEEEEETTTTEEEEEETT---TTEEEEEETTTTE---------EEE
T ss_pred -----CCEEEEEECCCce--EEEEEcCC--CCCeeEEEEcCCCCEEEEEecC---CCcEEEEECCCCc---------EEE
Confidence 2368888887643 22222221 2234678999999998766432 3689999998741 111
Q ss_pred eecCccceeE-EEEeeCCEEEEEECCCC----CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 366 VIPGMDHHHE-IIANNGPELIVKTTKNA----PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 366 l~~~~~~~~~-~~s~dg~~l~~~t~~~~----~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
.+........ .|+|+|+.|++.+.... .++.|+.+|+.++. ....+... .......+..+++.+++....+
T Consensus 249 ~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~---~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 249 KTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK---LIDTIGPP-GNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp ECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE---EEEEEEEE-ECEEEEEECSSTTEEEEEETTT
T ss_pred EecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc---EEeeccCC-CCcceEEECCCCCEEEEEecCC
Confidence 1221111122 58999998887664321 35689999987654 23333222 2222233344545777776655
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCC-----------ceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQP-----------GTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P-----------~~vy~~d~ 496 (783)
+ .|.+||+.+++.+..+... ..+..+.++++++.+++.......+ +.++.+|+
T Consensus 325 ~--~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 325 S--KIEVYDLKEKKVQKSIPVF-DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp T--EEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred C--EEEEEECCCCcEEEEecCC-CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 4 7899999878776666543 3455777889888887766543332 48999998
|
| >4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.9e-10 Score=116.62 Aligned_cols=116 Identities=12% Similarity=-0.046 Sum_probs=86.7
Q ss_pred cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecC--------CCCCCCChhHHhhcc
Q psy2521 537 TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNI--------RGGGELGEDWHNAGR 608 (783)
Q Consensus 537 ~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------RG~g~~G~~~~~~g~ 608 (783)
..+++.|++|++ .++.|+||.+||+. . .+. .||+++.+|+ +|+.++|. |+..-.
T Consensus 123 ~sf~~~i~lP~g---~~P~Pvii~~~~~~-~------------~~~-~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~ 184 (433)
T 4g4g_A 123 ISFSASIRKPSG---AGPFPAIIGIGGAS-I------------PIP-SNVATITFNNDEFGAQMGSGSRGQGK-FYDLFG 184 (433)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEESCCC-S------------CCC-TTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred EEEEEEEECCCC---CCCccEEEEECCCc-c------------ccC-CCeEEEEeCCcccccccCCCcCCccc-cccccC
Confidence 346899999986 47899999988741 1 033 5999999997 45556776 443211
Q ss_pred ccCCcChH----HHHHHHHHHHHH----cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcch
Q psy2521 609 LLKKQNCF----DDFQAAAEYMIN----KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD 671 (783)
Q Consensus 609 ~~~~~~~~----~D~~a~~~~l~~----~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d 671 (783)
.......+ =|+..+++||.. +..+|++||+|+|+|+||..++.++...+ +++++|+.++..+
T Consensus 185 ~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D~-Ri~~vi~~~sg~~ 254 (433)
T 4g4g_A 185 RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALVD-RIALTIPQESGAG 254 (433)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHCT-TCSEEEEESCCTT
T ss_pred CccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcCC-ceEEEEEecCCCC
Confidence 11111221 388889999998 78899999999999999999999999876 7899999987654
|
| >4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.6e-09 Score=116.67 Aligned_cols=121 Identities=13% Similarity=0.029 Sum_probs=88.6
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcC---------CEEEEEecCCCCCCCChhH
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF---------NGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~RG~g~~G~~~ 603 (783)
..||.+|+...+.+++ +..|.||++||.++.... |.. ....|.+. ||.|+++|+|| +|.+-
T Consensus 74 ~i~g~~i~~~~~~~~~----~~~~plll~HG~~~s~~~--~~~-~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~ 143 (388)
T 4i19_A 74 EIDGATIHFLHVRSPE----PDATPMVITHGWPGTPVE--FLD-IIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSG 143 (388)
T ss_dssp EETTEEEEEEEECCSS----TTCEEEEEECCTTCCGGG--GHH-HHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGC
T ss_pred EECCeEEEEEEccCCC----CCCCeEEEECCCCCCHHH--HHH-HHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCC
Confidence 4589999877665442 456889999999887654 443 34556644 99999999999 44221
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.. ......+.++...+..|++. ...+++.++|||+||.++..++.++|+.+++++...|+
T Consensus 144 ~~----~~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 203 (388)
T 4i19_A 144 PL----KSAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQ 203 (388)
T ss_dssp CC----SSCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCC
T ss_pred CC----CCCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCC
Confidence 11 11134577888877777665 23458999999999999999999999999999998763
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.07 E-value=3.3e-08 Score=107.05 Aligned_cols=206 Identities=12% Similarity=0.040 Sum_probs=121.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+..++|||||++||.+. |+...+|+|||+++++.+...........++|||||+.|+....+
T Consensus 136 ~~~v~fSpDg~~la~as---~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~--------------- 197 (365)
T 4h5i_A 136 TKLVYISREGTVAAIAS---SKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS--------------- 197 (365)
T ss_dssp EEEEEECTTSSCEEEEE---SCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS---------------
T ss_pred EEEEEEcCCCCEEEEEE---CCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce---------------
Confidence 56789999999998875 334468999999999865433233334689999999988876511
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
.+.++...++.. ...............+.|+|||++++.....+.....++.+++..+.. .. .....+....
T Consensus 198 --~~~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~-~~---~~~~~~~~~~ 269 (365)
T 4h5i_A 198 --SLEVISTVTGSC--IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT-SV---LRSKQVTNRF 269 (365)
T ss_dssp --CEEEEETTTCCE--EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE-EE---EEEEEEESSC
T ss_pred --eEEEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee-cc---eeeeeecCCC
Confidence 244444443321 111111122334567899999999987766544335677787765210 00 0011111211
Q ss_pred cceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 371 DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 371 ~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
..-.. .|+|||+.|+..+.. ..|..+|+.++. ....+.... ...+..+.+..++.++++...|+ .|.+|+
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D----~~V~iwd~~~~~--~~~~~~~gH-~~~V~~v~fSpdg~~laS~S~D~--tvrvw~ 340 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASND----NSIALVKLKDLS--MSKIFKQAH-SFAITEVTISPDSTYVASVSAAN--TIHIIK 340 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETT----SCEEEEETTTTE--EEEEETTSS-SSCEEEEEECTTSCEEEEEETTS--EEEEEE
T ss_pred CCeEeEEECCCCCceEEEcCC----CEEEEEECCCCc--EEEEecCcc-cCCEEEEEECCCCCEEEEEeCCC--eEEEEE
Confidence 22222 599999988765543 358888987654 122333222 23344554444466777777775 577888
Q ss_pred CC
Q psy2521 450 LN 451 (783)
Q Consensus 450 l~ 451 (783)
+.
T Consensus 341 ip 342 (365)
T 4h5i_A 341 LP 342 (365)
T ss_dssp CC
T ss_pred cC
Confidence 74
|
| >2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=8e-11 Score=134.13 Aligned_cols=133 Identities=20% Similarity=0.141 Sum_probs=93.0
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHHHHHHHcCCEEEEEecCC-CCCCCChhHHhhcccc
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIR-GGGELGEDWHNAGRLL 610 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~R-G~g~~G~~~~~~g~~~ 610 (783)
+.|.. .+.++.|++....++.|+||++|||....... .|... .+..+.|++|+.+||| |..+|+..... ..
T Consensus 95 ~edcl--~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~---~~ 167 (542)
T 2h7c_A 95 SEDCL--YLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDE---HS 167 (542)
T ss_dssp ESCCC--EEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSST---TC
T ss_pred CCCCc--EEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcc---cC
Confidence 34554 44567787654457899999999985433222 24433 3444469999999999 32223321111 11
Q ss_pred CCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcchh
Q psy2521 611 KKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALDM 672 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~d~ 672 (783)
.+...+.|++++++|+.++ -..||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..+.
T Consensus 168 ~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 168 RGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 2234578999999999775 24799999999999999999998876 36799999999997764
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.06 E-value=6.5e-08 Score=107.75 Aligned_cols=240 Identities=8% Similarity=0.039 Sum_probs=144.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECC--CCcccccc---ccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYPEV---LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~--tg~~~~~~---~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+..++|||||++|+++.+.+ ..|++||+. +|+.+... ........++|+|||+.|+....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------- 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---------- 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET----------
T ss_pred ceEEEEEcCCCCEEEEEECCC----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC----------
Confidence 478899999999987665543 459999998 77655432 11122358999999998887762
Q ss_pred cccccCCceEEEEEcCCCCCCc--eeEEecCCCCeeEEEEEEecC---CcEEEEEEecCCCCcEEEEEECCCCCCCcccC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKD--IPVVEFPNGRSLGLHSEVTDC---GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG 359 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d--~~v~~~~~~~~~~~~~~~SpD---Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~ 359 (783)
...++.+++.+..... ...+... ......+.|+|| |++|+.... ...|+++|+.++.
T Consensus 170 ------~g~v~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~l~s~~~----d~~i~vwd~~~~~------ 231 (450)
T 2vdu_B 170 ------FGDVYSIDINSIPEEKFTQEPILGH--VSMLTDVHLIKDSDGHQFIITSDR----DEHIKISHYPQCF------ 231 (450)
T ss_dssp ------TSEEEEEETTSCCCSSCCCCCSEEC--SSCEEEEEEEECTTSCEEEEEEET----TSCEEEEEESCTT------
T ss_pred ------CCcEEEEecCCcccccccceeeecc--cCceEEEEEcCCCCCCcEEEEEcC----CCcEEEEECCCCc------
Confidence 2367888876654321 0011111 123467899999 888765432 2578999987731
Q ss_pred CCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC---------------------
Q psy2521 360 KFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE--------------------- 416 (783)
Q Consensus 360 ~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~--------------------- 416 (783)
.......+..... . .|+ +|+.|+..+. ...|..+|+.++. ....+..
T Consensus 232 --~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~----d~~v~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 232 --IVDKWLFGHKHFVSSICCG-KDYLLLSAGG----DDKIFAWDWKTGK---NLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp --CEEEECCCCSSCEEEEEEC-STTEEEEEES----SSEEEEEETTTCC---EEEEEECHHHHGGGCCTTSBC-------
T ss_pred --eeeeeecCCCCceEEEEEC-CCCEEEEEeC----CCeEEEEECCCCc---Eeeeecchhhhhhhhhhccccccccccc
Confidence 1122222222222 2 488 8887776543 3468888987754 1222210
Q ss_pred ---CCCceEEEEEE-eeCCEEEEEEecCCeeEEEEEEC--CCC---ceeeeecCCCeEEEeeeccccccEEEEEEecCCC
Q psy2521 417 ---DENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDL--NTG---KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQ 487 (783)
Q Consensus 417 ---~~~~~l~~~~~-~~g~~l~~~~~~~g~~~l~~~dl--~~G---~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~ 487 (783)
.....+..+.+ .+++.|++....+ ..|.+|++ .++ +.+..+..+ +.+..+.+++ +.++++..+...
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~l~~~~~~d--~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~ 376 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPFVAFFVEAT--KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKES 376 (450)
T ss_dssp ---CBCCCEEEEEECSSSSEEEEEETTC--SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTC
T ss_pred ccccceEEEEEEEEeCCCCEEEEEECCC--CeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccC
Confidence 01122333433 3434555544344 46778887 455 444555555 5676777777 358888888877
Q ss_pred Cc------eEEEEeC
Q psy2521 488 PG------TIYHCNI 496 (783)
Q Consensus 488 P~------~vy~~d~ 496 (783)
|. .+|.++.
T Consensus 377 ~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSCCCSEEEEEEET
T ss_pred CCCCCcceEEEEEEc
Confidence 76 8998887
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-07 Score=106.60 Aligned_cols=286 Identities=9% Similarity=0.059 Sum_probs=162.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEEC--CCCccccccccccccCeeEEee----CCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV--DTGKDYPEVLKNVKFPSISWTH----DHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl--~tg~~~~~~~~~~~~~~~~Wsp----Dg~~l~y~~~~~~~~~~~g~ 284 (783)
...+.+||||++|+.+.. + ..|+++|+ ++++.+.....+....+++||| ||+.+|.....+
T Consensus 181 ~~~v~~spdg~~l~v~~~-d----~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~-------- 247 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGR-D----ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP-------- 247 (543)
T ss_dssp EEEEEECTTSCEEEEEET-T----SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES--------
T ss_pred cceEEECCCCCEEEEECC-C----CeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccC--------
Confidence 557889999998876543 2 46999999 7887654322233335889999 999887766432
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecC----------CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFP----------NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~----------~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
..|.+++..+... +...... .++ ....+.+|||++.+++... +...|+++|..++.
T Consensus 248 -------~~v~v~D~~t~~~--~~~i~~~g~~~~~~~~~~~~-~v~~i~~s~~~~~~~vs~~---~~g~i~vvd~~~~~- 313 (543)
T 1nir_A 248 -------PQFAIMDGETLEP--KQIVSTRGMTVDTQTYHPEP-RVAAIIASHEHPEFIVNVK---ETGKVLLVNYKDID- 313 (543)
T ss_dssp -------SEEEEEETTTCCE--EEEEECCEECSSSCCEESCC-CEEEEEECSSSSEEEEEET---TTTEEEEEECTTSS-
T ss_pred -------CeEEEEecccccc--ceeecccCcccCccccccCC-ceEEEEECCCCCEEEEEEC---CCCeEEEEEecCCC-
Confidence 3566777655421 1122110 011 3357889999998876643 34799999998731
Q ss_pred CcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC----CCceEEEEEEeeC
Q psy2521 355 GKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED----ENRTLDVVAAVAN 430 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~----~~~~l~~~~~~~g 430 (783)
. .....+-.+.....-.|+|||++|+...+. ...|..+|+.+++ ....++-. ..... .+..+++
T Consensus 314 -~----l~~~~i~~~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~---l~~~i~~g~~ph~g~g~-~~~~p~~ 381 (543)
T 1nir_A 314 -N----LTVTSIGAAPFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRR---LSALVDVGKTPHPGRGA-NFVHPKY 381 (543)
T ss_dssp -S----CEEEEEECCSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTE---EEEEEECSSSBCCTTCE-EEEETTT
T ss_pred -c----ceeEEeccCcCccCceECCCCCEEEEEecC---CCeEEEEECCCCe---EEEeeccCCCCCCCCCc-ccCCCCC
Confidence 1 111111111111112599999988765543 2358889988765 33333321 11112 2233333
Q ss_pred CEEEEEEecCCeeEEEEEECCC-------CceeeeecCCCeEEEeeeccccccEEEEEEecCCCC-----ceEEEEeCCC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNT-------GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQP-----GTIYHCNIPE 498 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~-------G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P-----~~vy~~d~~~ 498 (783)
+.++++.. .+...|.+||.++ ++.++.|..+.+.+..+..+|+++.++... ...| .+|..+|+
T Consensus 382 g~~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~--~~~~~~~~~~~v~v~d~-- 456 (543)
T 1nir_A 382 GPVWSTSH-LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT--TFNPDARISQSVAVFDL-- 456 (543)
T ss_dssp EEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC--TTCSSHHHHTCEEEEET--
T ss_pred ccEEEecc-CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec--CCCCCcccCceEEEEEC--
Confidence 55555443 2335799999977 677788876522223566789998888532 2233 38999999
Q ss_pred CcCCCCCCceEEEeeccCCCCCCCCCeEEEEEEECCCCcEEEEEEE
Q psy2521 499 NITDQDDFKPTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYII 544 (783)
Q Consensus 499 ~~~~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~ 544 (783)
++++...+.+.-....++....-.+..+.| ++||.++-..+.
T Consensus 457 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~g~~~~~s~~ 498 (543)
T 1nir_A 457 ---KNLDAKYQVLPIAEWADLGEGAKRVVQPEY-NKRGDEVWFSVW 498 (543)
T ss_dssp ---TCTTSCCEEECHHHHHCCCSSCCEEEEEEE-CSSSSEEEEEEE
T ss_pred ---CCCCCCeEEeechhhcccCCCCCceEeccC-CCCCCEEEEEee
Confidence 455311133211111112222234555655 578887665443
|
| >3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP} | Back alignment and structure |
|---|
Probab=99.04 E-value=4.4e-09 Score=110.10 Aligned_cols=117 Identities=12% Similarity=0.073 Sum_probs=76.2
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+... +..|.||++||.++.... |... ...|. .||.|+++|+||.|... ..........
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~~~~--w~~~-~~~l~-~~~~vi~~Dl~G~G~s~---~~~~~~~~~~ 76 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQTHVM--WHKI-APLLA-NNFTVVATDLRGYGDSS---RPASVPHHIN 76 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCCGGG--GTTT-HHHHT-TTSEEEEECCTTSTTSC---CCCCCGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCCHHH--HHHH-HHHHh-CCCEEEEEcCCCCCCCC---CCCCCccccc
Confidence 47777776532 245789999998876654 3332 35566 49999999999954332 1111000111
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
...+++.+.+..+++. ...+++.++|||+||.++..++.++|++++++|...
T Consensus 77 ~~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (291)
T 3qyj_A 77 YSKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLD 128 (291)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEES
T ss_pred cCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEEC
Confidence 2344444443333333 123579999999999999999999999999988764
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-07 Score=107.56 Aligned_cols=252 Identities=13% Similarity=0.129 Sum_probs=148.9
Q ss_pred EeeEEECC----CCcEEEEEEecCCCceEEEEEEECCCCcccccccc------------ccccCeeEEeeCCCEEEEEEe
Q psy2521 211 LKLYAFSD----NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK------------NVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 211 l~~~~~SP----DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~------------~~~~~~~~WspDg~~l~y~~~ 274 (783)
...+++|| ||++|+.+.... .+|.|+|..+++.+..... ......+.+|||++.++++..
T Consensus 224 p~~va~sp~~~~dg~~l~v~~~~~----~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 224 ARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEES----SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cceEEeCCCcCCCCCEEEEEEccC----CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 46789999 999987654322 4689999999886542211 112357889999988776652
Q ss_pred ecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 275 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 275 ~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...+|+.+++.+...- .+...+. ..+..++.|||||++++..... .+.|.++|+.++.
T Consensus 300 ---------------~~g~i~vvd~~~~~~l--~~~~i~~-~~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~- 357 (543)
T 1nir_A 300 ---------------ETGKVLLVNYKDIDNL--TVTSIGA-APFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRR- 357 (543)
T ss_dssp ---------------TTTEEEEEECTTSSSC--EEEEEEC-CSSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTE-
T ss_pred ---------------CCCeEEEEEecCCCcc--eeEEecc-CcCccCceECCCCCEEEEEecC---CCeEEEEECCCCe-
Confidence 2347888888764321 1111111 1233568899999998765432 3689999998842
Q ss_pred CcccCCCCceeeec-C---c-cceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC--CCCcE---EeecCCCCceEEE
Q psy2521 355 GKISGKFPLKTVIP-G---M-DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC--EKNWK---TLIPEDENRTLDV 424 (783)
Q Consensus 355 ~~l~~~~~~~~l~~-~---~-~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~--~~~~~---~li~~~~~~~l~~ 424 (783)
....+. + . .....+++|+++.+|+..+.+ ...|..+|.++.+ ...|+ ++-.++ ...+.-
T Consensus 358 --------l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-~~~~~v 426 (543)
T 1nir_A 358 --------LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFI 426 (543)
T ss_dssp --------EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCE
T ss_pred --------EEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeCCCCCchhcCeEEEEEEcCC-CCceEE
Confidence 111111 1 1 112233567777777654432 2357777776521 11132 332222 222222
Q ss_pred EEEeeCCEEEEEEecC----CeeEEEEEECCCCcee-eeec--------CCCeEEEeeeccccccEEEEEEec-CCCCce
Q psy2521 425 VAAVANNKLIVHYIQN----VRSVMDLHDLNTGKRL-HSFP--------LDLGQITHISGRRKYNEVFYGFTS-FLQPGT 490 (783)
Q Consensus 425 ~~~~~g~~l~~~~~~~----g~~~l~~~dl~~G~~~-~~l~--------~~~g~v~~~s~~~d~~~l~~~~ss-~~~P~~ 490 (783)
...++++.|++...-+ ....|.+||+++++.. ..|+ .+...+..+..++++++++++.-+ -....+
T Consensus 427 ~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~ 506 (543)
T 1nir_A 427 KTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSA 506 (543)
T ss_dssp ECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCE
T ss_pred EcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCe
Confidence 2345545666544211 1347999999888765 4432 223455678889999999987643 245678
Q ss_pred EEEEeCCCCcCCCC
Q psy2521 491 IYHCNIPENITDQD 504 (783)
Q Consensus 491 vy~~d~~~~~~~tg 504 (783)
|..+|. +|+
T Consensus 507 i~v~D~-----~t~ 515 (543)
T 1nir_A 507 LVVVDD-----KTL 515 (543)
T ss_dssp EEEEET-----TTT
T ss_pred EEEEEC-----CCc
Confidence 999998 576
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4e-07 Score=97.83 Aligned_cols=285 Identities=14% Similarity=0.086 Sum_probs=138.0
Q ss_pred CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-CCceEEEEEEECCCCcccccc-c--cc
Q psy2521 179 QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-GSDWNTLHIKDVDTGKDYPEV-L--KN 254 (783)
Q Consensus 179 ~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-G~d~~~i~v~Dl~tg~~~~~~-~--~~ 254 (783)
...-.+|..+..++..+.+... .. .....++|||||++|+++...+ +.....+|.+|.++|+..... . ..
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~-~~-----~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~ 99 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA-EV-----ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG 99 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE-EC-----SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCCEEEEEEeCCCCCEEEeecc-cC-----CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC
Confidence 3445566666555555544332 11 1134579999999887766532 122234455555557643322 1 11
Q ss_pred cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc-e-eEEec-CCC-------CeeEEEEEE
Q psy2521 255 VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD-I-PVVEF-PNG-------RSLGLHSEV 324 (783)
Q Consensus 255 ~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d-~-~v~~~-~~~-------~~~~~~~~~ 324 (783)
.....+++ ||+.|+.+... ...+.++++.+...-. . ..... ... ......+.|
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~---------------~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYS---------------GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETT---------------TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred CCcEEEEE--CCCEEEEEECC---------------CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 11123444 88887766521 2357777775432111 0 11111 000 112256899
Q ss_pred ecCCcEEEEEEecCCCCcEEEEEECCCCCCC----c-ccCC-C-CceeeecCccceeEEEEeeCCEEEEEECCCCCCceE
Q psy2521 325 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG----K-ISGK-F-PLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKV 397 (783)
Q Consensus 325 SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~----~-l~~~-~-~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L 397 (783)
||||++|++.... ...+++++++.. .. . +... . ....+..+.......|+|||+.+|+.... ...|
T Consensus 163 spdg~~l~~~~~~---~~~v~v~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~---~~~v 235 (361)
T 3scy_A 163 TPDGKYLLADDLG---TDQIHKFNINPN-ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI---GGTV 235 (361)
T ss_dssp CTTSSEEEEEETT---TTEEEEEEECTT-CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT---TCEE
T ss_pred CCCCCEEEEEeCC---CCEEEEEEEcCC-CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC---CCeE
Confidence 9999998875432 257777776652 11 0 1000 0 00011111111122599999988876543 2357
Q ss_pred EEEcCCCCCCCCcEEeec--CCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC--CCCce--eeeecCCCeEEEeeec
Q psy2521 398 VTINLNNPCEKNWKTLIP--EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL--NTGKR--LHSFPLDLGQITHISG 471 (783)
Q Consensus 398 ~~~d~~~~~~~~~~~li~--~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl--~~G~~--~~~l~~~~g~v~~~s~ 471 (783)
..++++++.......+.. ..........+.++++.|++.... +...|.+|++ .+|+. +..+.. ...+..+.+
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~-~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~ 313 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL-KADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII 313 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS-SSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC-CCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE
Confidence 777776543111122211 111112222344555566665544 1234566555 35653 233332 122345667
Q ss_pred cccccEEEEEEecCCCCceEEEEeC
Q psy2521 472 RRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 472 ~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++++.+++... ...--.+|.+|.
T Consensus 314 spdg~~l~~~~~-~~~~v~v~~~d~ 337 (361)
T 3scy_A 314 TPNGKYLLVACR-DTNVIQIFERDQ 337 (361)
T ss_dssp CTTSCEEEEEET-TTTEEEEEEECT
T ss_pred CCCCCEEEEEEC-CCCCEEEEEEEC
Confidence 888887776543 223335666777
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=4.7e-08 Score=104.90 Aligned_cols=237 Identities=6% Similarity=-0.014 Sum_probs=143.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc---c--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---L--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~---~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..++||||++ |+.+. . ...|+|||+++|+.+... . .......++|+|||+.|+-...+
T Consensus 85 v~~~~~s~d~~-l~~~s-~----dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---------- 148 (344)
T 4gqb_B 85 VADLTWVGERG-ILVAS-D----SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---------- 148 (344)
T ss_dssp EEEEEEETTTE-EEEEE-T----TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT----------
T ss_pred EEEEEEeCCCe-EEEEE-C----CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC----------
Confidence 77899999975 44332 2 246999999998754321 1 11223578999999988766522
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
..|.++++.+.. .+..+. .+......+.|+||++.++++.+. ...|.++|+.++. ....
T Consensus 149 ------~~i~iwd~~~~~--~~~~~~--~h~~~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~--------~~~~ 207 (344)
T 4gqb_B 149 ------ICIKVWDLAQQV--VLSSYR--AHAAQVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPK--------PASQ 207 (344)
T ss_dssp ------SCEEEEETTTTE--EEEEEC--CCSSCEEEEEECSSCTTEEEEEET---TSCEEEEETTSSS--------CEEE
T ss_pred ------CeEEEEECCCCc--EEEEEc--CcCCceEEEEecCCCCCceeeecc---ccccccccccccc--------eeee
Confidence 257888887642 222232 222345678999999877665543 2578999998742 1111
Q ss_pred eecCc-cc-eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGM-DH-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~-~~-~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
+.... .. ... .|+|++..+++.... ++.|..+|+.++. ....+..+. ..+..-.+.+++..++++...|+
T Consensus 208 ~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~~~--~~~~~~~h~-~~v~~v~fsp~g~~~lasgs~D~- 280 (344)
T 4gqb_B 208 IGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKSTS--CVLSSAVHS-QCVTGLVFSPHSVPFLASLSEDC- 280 (344)
T ss_dssp CC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC----CCEEEECCS-SCEEEEEECSSSSCCEEEEETTS-
T ss_pred eecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCCCc--EEEEEcCCC-CCEEEEEEccCCCeEEEEEeCCC-
Confidence 21111 11 112 478877666655443 3468888987654 234444443 33333333345456777777665
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|++||+.+++. ..+....+.|..+.++|++..++.+.+.- .+|..+++
T Consensus 281 -~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D---~~v~~w~v 329 (344)
T 4gqb_B 281 -SLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWD---HQVVHHVV 329 (344)
T ss_dssp -CEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEETT---SCEEEEEC
T ss_pred -eEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCC---CeEEEEEC
Confidence 588899977765 34444456788888899888777665432 36778887
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.1e-08 Score=104.48 Aligned_cols=237 Identities=13% Similarity=0.073 Sum_probs=134.5
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+++++++++.++-... . .+|+++|+++++.+....... ....++|+|||+.+|++.. .
T Consensus 4 g~~~~~~~~~~v~~~~-~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~---------------~ 63 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNY-P----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---------------H 63 (349)
T ss_dssp CCCCCTTCEEEEEEET-T----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---------------T
T ss_pred cccccCCCEEEEEeCC-C----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC---------------C
Confidence 4567888876554332 1 479999999998654322122 2468999999998877762 1
Q ss_pred CceEEEEEcCCCCCCceeEEecCCC----CeeEEEEEEecCCcEEEEEEec--------CCCCcEEEEEECCCCCCCccc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNG----RSLGLHSEVTDCGRYLLVSTSN--------NTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~----~~~~~~~~~SpDGk~l~~~~~~--------~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|+++++.+... +.....+.. ......+.+||||++|++.... ......|+++|+.++...
T Consensus 64 ~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--- 138 (349)
T 1jmx_B 64 YGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA--- 138 (349)
T ss_dssp TTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB---
T ss_pred CCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc---
Confidence 34688888866421 122222211 0012357899999999887632 001268999999773110
Q ss_pred CCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC-------------------
Q psy2521 359 GKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN------------------- 419 (783)
Q Consensus 359 ~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~------------------- 419 (783)
................|+|||+ +|+. . ..|+.+|+.+++ ....++....
T Consensus 139 --~~~~~~~~~~~~~~~~~s~dg~-l~~~-~-----~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (349)
T 1jmx_B 139 --KPVRTFPMPRQVYLMRAADDGS-LYVA-G-----PDIYKMDVKTGK---YTVALPLRNWNRKGYSAPDVLYFWPHQSP 206 (349)
T ss_dssp --CCSEEEECCSSCCCEEECTTSC-EEEE-S-----SSEEEECTTTCC---EEEEECSTTCCCTTBCCCBCCCCCCCCCT
T ss_pred --ceeeeccCCCcccceeECCCCc-EEEc-c-----CcEEEEeCCCCc---eeccccccccCCccccCccceeeecCCCc
Confidence 0011111111111114899998 7663 2 138888886654 2222221100
Q ss_pred -c-----------------------------------------------eEEEE-EEe-eCCEEEEEEecCCeeEEEEEE
Q psy2521 420 -R-----------------------------------------------TLDVV-AAV-ANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 420 -~-----------------------------------------------~l~~~-~~~-~g~~l~~~~~~~g~~~l~~~d 449 (783)
. ....+ ... +++.+++. ...|++||
T Consensus 207 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d 281 (349)
T 1jmx_B 207 RHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYD 281 (349)
T ss_dssp TCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEE
T ss_pred ceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEE
Confidence 0 00011 113 44555554 35799999
Q ss_pred CCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 450 LNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 450 l~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+++.+..+..+. .+..+.++++++.+++. +. -..++.+|+
T Consensus 282 ~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~~--~~~v~v~d~ 323 (349)
T 1jmx_B 282 LKQRKLIKAANLDH-TYYCVAFDKKGDKLYLG--GT--FNDLAVFNP 323 (349)
T ss_dssp TTTTEEEEEEECSS-CCCEEEECSSSSCEEEE--SB--SSEEEEEET
T ss_pred CccCeEEEEEcCCC-CccceEECCCCCEEEEe--cC--CCeEEEEec
Confidence 98888766666542 23356677888888763 22 278999999
|
| >2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.3e-10 Score=116.87 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=78.8
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++.+... +.+ ...|.||++||..+.... |... ...|++ +|.|+++|.||.|.... . ...
T Consensus 11 ~~g~~l~y~~~-~~G----~~~p~vvllHG~~~~~~~--w~~~-~~~L~~-~~rvia~DlrGhG~S~~---~-----~~~ 73 (276)
T 2wj6_A 11 VFDNKLSYIDN-QRD----TDGPAILLLPGWCHDHRV--YKYL-IQELDA-DFRVIVPNWRGHGLSPS---E-----VPD 73 (276)
T ss_dssp ETTEEEEEEEC-CCC----CSSCEEEEECCTTCCGGG--GHHH-HHHHTT-TSCEEEECCTTCSSSCC---C-----CCC
T ss_pred eCCeEEEEEEe-cCC----CCCCeEEEECCCCCcHHH--HHHH-HHHHhc-CCEEEEeCCCCCCCCCC---C-----CCC
Confidence 47777655432 111 124889999998766543 5543 355664 89999999999554321 1 112
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-CCceeEEEEcCC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-PELYGAALILVG 668 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~lf~a~i~~~~ 668 (783)
.+++++.+.+..|++. .+.+++.++|||+||.+++.++.++ |++++++|+..+
T Consensus 74 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 74 FGYQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CCHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 3466666555555543 2235899999999999999999999 999999888754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.3e-07 Score=105.28 Aligned_cols=204 Identities=9% Similarity=0.098 Sum_probs=114.8
Q ss_pred cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
...++|+|||+.|+++... ...|.++++.....+....+.....+.....+.|+|||++|+....
T Consensus 105 v~~~~~s~d~~~l~~~~~~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADS---------------DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp EEEEEECTTSSEEEEEEGG---------------GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEEcCCCCEEEEEECC---------------CCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC
Confidence 3578999999998777622 2357777876211222233321111223467899999999986533
Q ss_pred cCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE-EEEee---CCEEEEEECCCCCCceEEEEcCCCCCCCCcEE
Q psy2521 337 NNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNWKT 412 (783)
Q Consensus 337 ~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~d---g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~ 412 (783)
...++++++.++.... .....+......... .|+|+ ++.|+. +..+ ..|..+|+.++. ....
T Consensus 170 ----~g~v~~~~~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s-~~~d---~~i~vwd~~~~~--~~~~ 235 (450)
T 2vdu_B 170 ----FGDVYSIDINSIPEEK----FTQEPILGHVSMLTDVHLIKDSDGHQFIIT-SDRD---EHIKISHYPQCF--IVDK 235 (450)
T ss_dssp ----TSEEEEEETTSCCCSS----CCCCCSEECSSCEEEEEEEECTTSCEEEEE-EETT---SCEEEEEESCTT--CEEE
T ss_pred ----CCcEEEEecCCccccc----ccceeeecccCceEEEEEcCCCCCCcEEEE-EcCC---CcEEEEECCCCc--eeee
Confidence 3579999997742110 001111111122222 59998 655554 3332 457888877654 1233
Q ss_pred eecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-------------------------CeEEE
Q psy2521 413 LIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------------------LGQIT 467 (783)
Q Consensus 413 li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-------------------------~g~v~ 467 (783)
++... ...+..+.+.+ +.++++...++ .|.+||+.+|+.+..+... ...+.
T Consensus 236 ~~~~h-~~~v~~~~~sd-~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 236 WLFGH-KHFVSSICCGK-DYLLLSAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp ECCCC-SSCEEEEEECS-TTEEEEEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eecCC-CCceEEEEECC-CCEEEEEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 23222 22333444444 55555555553 7999999888876666421 23456
Q ss_pred eeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 468 HISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 468 ~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+.+.+++..+++.... -..++.||+
T Consensus 312 ~i~~~~~~~~l~~~~~~---d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEA---TKCIIILEM 337 (450)
T ss_dssp EEEECSSSSEEEEEETT---CSEEEEEEE
T ss_pred EEEEeCCCCEEEEEECC---CCeEEEEEe
Confidence 67777877776655422 246777777
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2.5e-07 Score=97.18 Aligned_cols=236 Identities=10% Similarity=0.089 Sum_probs=144.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..++|||||++|+-+... ..|++||+++++.+... ..........|+||++.|+-...
T Consensus 16 V~~~~fsp~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~--------------- 75 (304)
T 2ynn_A 16 VKGIDFHPTEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD--------------- 75 (304)
T ss_dssp EEEEEECSSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---------------
T ss_pred eEEEEECCCCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---------------
Confidence 7789999999998865432 47999999998754322 12222357899999998876652
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...|.++++.+.. .+..+.. +......+.++||+++|+-... ...|.++|+.++. .......+
T Consensus 76 -d~~i~vwd~~~~~--~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~----D~~v~lWd~~~~~--------~~~~~~~~ 138 (304)
T 2ynn_A 76 -DFRIRVFNYNTGE--KVVDFEA--HPDYIRSIAVHPTKPYVLSGSD----DLTVKLWNWENNW--------ALEQTFEG 138 (304)
T ss_dssp -TSEEEEEETTTCC--EEEEEEC--CSSCEEEEEECSSSSEEEEEET----TSCEEEEEGGGTT--------EEEEEECC
T ss_pred -CCEEEEEECCCCc--EEEEEeC--CCCcEEEEEEcCCCCEEEEECC----CCeEEEEECCCCc--------chhhhhcc
Confidence 2368888887653 2233332 2334568899999998874332 2578899987631 11222333
Q ss_pred ccceeE--EEEee-CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe--eCCEEEEEEecCCeeE
Q psy2521 370 MDHHHE--IIANN-GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV--ANNKLIVHYIQNVRSV 444 (783)
Q Consensus 370 ~~~~~~--~~s~d-g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~--~g~~l~~~~~~~g~~~ 444 (783)
...... .|+|+ +..|+. ... ...|..+|+..... ...+.... ...+..+.+. .++.++++...++ .
T Consensus 139 h~~~v~~v~~~p~~~~~l~s-gs~---D~~v~iwd~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~--~ 209 (304)
T 2ynn_A 139 HEHFVMCVAFNPKDPSTFAS-GCL---DRTVKVWSLGQSTP--NFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL--T 209 (304)
T ss_dssp CCSCEEEEEECTTCTTEEEE-EET---TSEEEEEETTCSSC--SEEEECCC-TTCEEEEEECCSTTCCEEEEEETTS--E
T ss_pred cCCcEEEEEECCCCCCEEEE-EeC---CCeEEEEECCCCCc--cceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCC--e
Confidence 333222 48884 455543 333 24588888865441 22333322 2223233222 2345666666664 6
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|.+||+.+++.+..+......+..+.++|++..++ +.+. -.++..+|+
T Consensus 210 i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~---Dg~i~iWd~ 257 (304)
T 2ynn_A 210 IKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII-SGSE---DGTLKIWNS 257 (304)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE-EEET---TSCEEEEET
T ss_pred EEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE-EEcC---CCeEEEEEC
Confidence 89999988887777776656677777788876444 3332 246888998
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=98.99 E-value=9.6e-08 Score=110.97 Aligned_cols=237 Identities=9% Similarity=0.022 Sum_probs=142.4
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..+++||||++||+... ..++++|+.+++....- -.......++|||||+.|+-...
T Consensus 22 ~~~~~spdg~~l~~~~~------~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~---------------- 79 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCNG------TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV---------------- 79 (611)
T ss_dssp CCCEECTTSSEEEEEET------TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET----------------
T ss_pred eEEeeCCCCCEEEeCCC------CEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeC----------------
Confidence 34779999999999752 26899999887654321 11222357899999998876652
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...|.+|++.+........+.... .....++|||||++|+...........|+++|... . ...+ .+.
T Consensus 80 d~~v~lWd~~~~~~~~~~~~~~~~--~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~--------~~~l-~gh 146 (611)
T 1nr0_A 80 HGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S--------NGNL-TGQ 146 (611)
T ss_dssp TSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B--------CBCC-CCC
T ss_pred CCCEEEeECCCCcceeeEeecccC--CceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C--------ccee-cCC
Confidence 236888888654322122222222 23568999999999986654322225788887533 0 1111 222
Q ss_pred ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 371 DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 371 ~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
.... . .|+|++...++....+ ..|..+|..... ....+... ...+..+.+..++.++++...|+ .|.+|
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D---~~v~lwd~~~~~---~~~~l~~H-~~~V~~v~fspdg~~las~s~D~--~i~lw 217 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDD---NTVAIFEGPPFK---FKSTFGEH-TKFVHSVRYNPDGSLFASTGGDG--TIVLY 217 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETT---SCEEEEETTTBE---EEEEECCC-SSCEEEEEECTTSSEEEEEETTS--CEEEE
T ss_pred CCCceEEEECCCCCeEEEEEeCC---CeEEEEECCCCe---Eeeeeccc-cCceEEEEECCCCCEEEEEECCC--cEEEE
Confidence 2222 2 4899987544444332 346677765433 22233322 23344444444466677776665 68899
Q ss_pred ECCCCceeeeec-------CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 449 DLNTGKRLHSFP-------LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 449 dl~~G~~~~~l~-------~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+.+|+.+..+. ...+.|..+.++|++..++ +.+. -.++..+|+
T Consensus 218 d~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~---D~~v~lWd~ 268 (611)
T 1nr0_A 218 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASA---DKTIKIWNV 268 (611)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEE-EEET---TSEEEEEET
T ss_pred ECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEE-EEeC---CCeEEEEeC
Confidence 988888766663 2356677888889887654 3222 357889998
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-07 Score=101.15 Aligned_cols=257 Identities=10% Similarity=0.010 Sum_probs=138.4
Q ss_pred eCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC
Q psy2521 166 QENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG 245 (783)
Q Consensus 166 ~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg 245 (783)
.++.+|.+-... ..|++.+..+++....+.... ......++|||||++++++.... .+|+++|++++
T Consensus 9 ~~~~~~v~~~~~----~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~s~dg~~~~v~~~~~----~~i~~~d~~t~ 75 (349)
T 1jmx_B 9 AGHEYMIVTNYP----NNLHVVDVASDTVYKSCVMPD-----KFGPGTAMMAPDNRTAYVLNNHY----GDIYGIDLDTC 75 (349)
T ss_dssp TTCEEEEEEETT----TEEEEEETTTTEEEEEEECSS-----CCSSCEEEECTTSSEEEEEETTT----TEEEEEETTTT
T ss_pred CCCEEEEEeCCC----CeEEEEECCCCcEEEEEecCC-----CCCCceeEECCCCCEEEEEeCCC----CcEEEEeCCCC
Confidence 456666654332 346666654444332333211 01145689999999877665322 46999999998
Q ss_pred cccccc-ccc------cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC-ceeEEecCCCCe
Q psy2521 246 KDYPEV-LKN------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK-DIPVVEFPNGRS 317 (783)
Q Consensus 246 ~~~~~~-~~~------~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~-d~~v~~~~~~~~ 317 (783)
+.+... ... .....++|+|||+.|++...+...... ........|+++++.+.... .+..+..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~----~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--- 148 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND----HYVVKPPRLEVFSTADGLEAKPVRTFPMPR--- 148 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS----CEEECCCEEEEEEGGGGGGBCCSEEEECCS---
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEccccccccc----ccccCCCeEEEEECCCccccceeeeccCCC---
Confidence 765322 111 113578999999999988743100000 00011357889998763211 122333333
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc-ccCCC---C---------------------c-e-eeecC-
Q psy2521 318 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-ISGKF---P---------------------L-K-TVIPG- 369 (783)
Q Consensus 318 ~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~-l~~~~---~---------------------~-~-~l~~~- 369 (783)
....+.|+|||+ +++. . .+|+++|+.++.... +.... + . . .....
T Consensus 149 ~~~~~~~s~dg~-l~~~--~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 149 QVYLMRAADDGS-LYVA--G----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp SCCCEEECTTSC-EEEE--S----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred cccceeECCCCc-EEEc--c----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 224577999999 5542 1 248999987742110 00000 0 0 0 00000
Q ss_pred -------------------------------cc-ceeE-EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec
Q psy2521 370 -------------------------------MD-HHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415 (783)
Q Consensus 370 -------------------------------~~-~~~~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~ 415 (783)
.. .... .++| ||+.+|+. ...|+.+|+.+++ ....++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~------~~~v~~~d~~~~~---~~~~~~ 292 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV------LNRLAKYDLKQRK---LIKAAN 292 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE------ESEEEEEETTTTE---EEEEEE
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE------cCeEEEEECccCe---EEEEEc
Confidence 00 0001 3568 88888765 3479999987754 223333
Q ss_pred CCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 416 ~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
.. .......+..+++.|++ ...+ ..|.+||+++++.+..++.+
T Consensus 293 ~~-~~~~~~~~s~dg~~l~~-~~~~--~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 293 LD-HTYYCVAFDKKGDKLYL-GGTF--NDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp CS-SCCCEEEECSSSSCEEE-ESBS--SEEEEEETTTTEEEEEEECS
T ss_pred CC-CCccceEECCCCCEEEE-ecCC--CeEEEEeccccceeeeeecC
Confidence 22 22222234445456766 3322 68999999888887777766
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.98 E-value=5.4e-08 Score=104.04 Aligned_cols=213 Identities=12% Similarity=0.094 Sum_probs=108.9
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECC-CCcccccc-cc--c---------cccCeeEEeeCCCEEEEEEeecC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDYPEV-LK--N---------VKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~-tg~~~~~~-~~--~---------~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
...++|||||++|+++...+ ..+.++|+. +|...... .. + .....++|+|||+ ++.+..
T Consensus 88 p~~~a~spdg~~l~~~~~~~----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~--- 159 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHK----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL--- 159 (347)
T ss_dssp CSEEEEETTTTEEEEEETTT----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET---
T ss_pred CEEEEECCCCCEEEEEeCCC----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC---
Confidence 45689999999988765432 358888884 44322111 11 0 0123589999999 655441
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeE--EecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPV--VEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v--~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~ 355 (783)
....|+++++.... +-..+ +..+... ....+.|||||++|++.... ...+.+++++.. ..
T Consensus 160 ------------~~~~v~~~~~~~~g-~~~~~~~~~~~~g~-~p~~~~~spdg~~l~v~~~~---~~~v~v~~~~~~-~g 221 (347)
T 3hfq_A 160 ------------GSDKVYVYNVSDAG-QLSEQSVLTMEAGF-GPRHLVFSPDGQYAFLAGEL---SSQIASLKYDTQ-TG 221 (347)
T ss_dssp ------------TTTEEEEEEECTTS-CEEEEEEEECCTTC-CEEEEEECTTSSEEEEEETT---TTEEEEEEEETT-TT
T ss_pred ------------CCCEEEEEEECCCC-cEEEeeeEEcCCCC-CCceEEECCCCCEEEEEeCC---CCEEEEEEecCC-CC
Confidence 12368888876321 11111 1222211 22468999999998775432 246666665431 01
Q ss_pred cccCCCCceeeec---Cc---ccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe
Q psy2521 356 KISGKFPLKTVIP---GM---DHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV 428 (783)
Q Consensus 356 ~l~~~~~~~~l~~---~~---~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~ 428 (783)
.+. ....+.. +. .... ..|+|||++||+.... ...|..++++..........++..........+.+
T Consensus 222 ~~~---~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 222 AFT---QLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---YNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp EEE---EEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---TTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECT
T ss_pred ceE---EeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---CCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECC
Confidence 110 0011110 00 1111 2599999988875432 23466666642211011122222112222223445
Q ss_pred eCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
+++.|++....++.-.++.+|.++|+.
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 555677766665655566668777775
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.98 E-value=9.1e-08 Score=114.77 Aligned_cols=237 Identities=11% Similarity=0.096 Sum_probs=149.6
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++||.+... ..|++||+.+|+.+... ........++|+|||+.|+....
T Consensus 15 ~v~~i~~sp~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------- 75 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------------- 75 (814)
T ss_dssp CEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET--------------
T ss_pred ceEEEEECCCCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC--------------
Confidence 37789999999999987632 46999999998765422 22223468999999999887762
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...|.++++.+.. ....+.. .......+.|+|||++|+.... ...|.++|+.++. .......
T Consensus 76 --dg~i~vw~~~~~~--~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~----dg~i~vw~~~~~~--------~~~~~~~ 137 (814)
T 3mkq_A 76 --DFRIRVFNYNTGE--KVVDFEA--HPDYIRSIAVHPTKPYVLSGSD----DLTVKLWNWENNW--------ALEQTFE 137 (814)
T ss_dssp --TSEEEEEETTTCC--EEEEEEC--CSSCEEEEEECSSSSEEEEEET----TSEEEEEEGGGTS--------EEEEEEE
T ss_pred --CCeEEEEECCCCc--EEEEEec--CCCCEEEEEEeCCCCEEEEEcC----CCEEEEEECCCCc--------eEEEEEc
Confidence 2368888887653 2223332 2234568899999999885432 2578899987620 1122222
Q ss_pred Ccccee-E-EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee--CCEEEEEEecCCee
Q psy2521 369 GMDHHH-E-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA--NNKLIVHYIQNVRS 443 (783)
Q Consensus 369 ~~~~~~-~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~--g~~l~~~~~~~g~~ 443 (783)
+..... . .|+| +++.|+..+. .+.|..+|+.++.. ...+....... +..+.+.. ++.+++....++
T Consensus 138 ~~~~~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~--~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~dg-- 208 (814)
T 3mkq_A 138 GHEHFVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQSTP--NFTLTTGQERG-VNYVDYYPLPDKPYMITASDDL-- 208 (814)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEET----TSEEEEEETTCSSC--SEEEECCCTTC-CCEEEECCSTTCCEEEEECTTS--
T ss_pred CCCCcEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCcc--eeEEecCCCCC-EEEEEEEECCCCCEEEEEeCCC--
Confidence 222222 2 5888 7666665443 24688889876542 23333332122 22333322 355566666554
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+||+.+++.+..+....+.+..+.++++++.++.... -..+..+|+
T Consensus 209 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~v~vwd~ 257 (814)
T 3mkq_A 209 TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE----DGTLKIWNS 257 (814)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET----TSCEEEEET
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC----CCeEEEEEC
Confidence 6899999888877777666666778888888875554322 256888998
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.2e-07 Score=101.90 Aligned_cols=256 Identities=11% Similarity=0.081 Sum_probs=131.9
Q ss_pred CcEEeCCeEEEEEEcC-CCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 162 APQRQENNYFYFHNKG-LQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~-~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
..+++|.++|.....+ ....-.+|..+..++..+.+..... .+ .....+++ ||++|+.+...+ ..|.++
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~---~~-~~p~~~~~--dg~~l~~~~~~~----~~v~~~ 125 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT---MG-ADPCYLTT--NGKNIVTANYSG----GSITVF 125 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC---SS-SCEEEEEE--CSSEEEEEETTT----TEEEEE
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc---CC-CCcEEEEE--CCCEEEEEECCC----CEEEEE
Confidence 3456787777766542 2344566776653344444332111 11 11233445 999877654332 358899
Q ss_pred ECCCCccccccc-----cc----------cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC-
Q psy2521 241 DVDTGKDYPEVL-----KN----------VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD- 304 (783)
Q Consensus 241 Dl~tg~~~~~~~-----~~----------~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~- 304 (783)
++.++..+.... .+ .....++|+|||+.|+++.. ....|+++++.....
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---------------~~~~v~v~~~~~~~~~ 190 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL---------------GTDQIHKFNINPNANA 190 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET---------------TTTEEEEEEECTTCCT
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC---------------CCCEEEEEEEcCCCCc
Confidence 987543221110 00 01135899999999888762 123577777765432
Q ss_pred ---C-ce-----eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee---cCccc
Q psy2521 305 ---K-DI-----PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDH 372 (783)
Q Consensus 305 ---~-d~-----~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~~~~~ 372 (783)
+ -. .....+... ....+.|||||++|++.... .+.|+++++.+|. +. ....+. .+...
T Consensus 191 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~v~~~~---~~~v~v~~~~~g~---~~---~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 191 DNKEKFLTKGTPEAFKVAPGS-GPRHLIFNSDGKFAYLINEI---GGTVIAFRYADGM---LD---EIQTVAADTVNAQG 260 (361)
T ss_dssp TTCCCCEEEEEEEEEECCTTC-CEEEEEECTTSSEEEEEETT---TCEEEEEEEETTE---EE---EEEEEESCSSCCCC
T ss_pred ccccceeecccccceecCCCC-CCeEEEEcCCCCEEEEEcCC---CCeEEEEEecCCc---eE---EeEEEecCCCCCCC
Confidence 1 00 112222211 23578999999998765422 3678888887631 10 011111 11111
Q ss_pred eeE-EEEeeCCEEEEEECCC-CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 373 HHE-IIANNGPELIVKTTKN-APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 373 ~~~-~~s~dg~~l~~~t~~~-~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
... .|+|||++||+. +++ ...-.||.++..++...... .++.+ .......+.+++++|++....++.-.++.+|+
T Consensus 261 ~~~i~~spdg~~l~v~-~~~~~~~i~v~~~~~~~g~~~~~~-~~~~g-~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 261 SGDIHLSPDGKYLYAS-NRLKADGVAIFKVDETNGTLTKVG-YQLTG-IHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEEEECTTSSEEEEE-ECSSSCEEEEEEECTTTCCEEEEE-EEECS-SCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred cccEEECCCCCEEEEE-CCCCCCEEEEEEEcCCCCcEEEee-EecCC-CCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 112 599999988764 443 33334555554444311111 12222 22222334455566777666666666777888
Q ss_pred CCCce
Q psy2521 451 NTGKR 455 (783)
Q Consensus 451 ~~G~~ 455 (783)
++|+.
T Consensus 338 ~~g~~ 342 (361)
T 3scy_A 338 ATGLL 342 (361)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 77775
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.3e-06 Score=95.60 Aligned_cols=236 Identities=10% Similarity=0.054 Sum_probs=143.5
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
..++|||||++|+.+... ..|+++|+.+++...............|+||++.|+....+
T Consensus 60 ~~~~~s~~g~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---------------- 118 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLD-----GHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE---------------- 118 (420)
T ss_dssp TTCEEEEEETTEEEEEET-----TEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETT----------------
T ss_pred cceeeeecCCeEEEEEcC-----CcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECC----------------
Confidence 358899999999887653 47999999988765432222112345789999988877622
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
..|.++++.+.. .+............+.|+|||++|+.... ...|.++|+.++. ....+ .+..
T Consensus 119 g~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~----d~~i~iwd~~~~~--------~~~~~-~~h~ 181 (420)
T 3vl1_A 119 GDIKVLDSNFNL----QREIDQAHVSEITKLKFFPSGEALISSSQ----DMQLKIWSVKDGS--------NPRTL-IGHR 181 (420)
T ss_dssp SCEEEECTTSCE----EEEETTSSSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC--------CCEEE-ECCS
T ss_pred CCEEEEeCCCcc----eeeecccccCccEEEEECCCCCEEEEEeC----CCeEEEEeCCCCc--------CceEE-cCCC
Confidence 257777776432 22222222334568999999998875432 2589999998742 12222 2222
Q ss_pred cee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC-CCCceEEEEEE---------------------
Q psy2521 372 HHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTLDVVAA--------------------- 427 (783)
Q Consensus 372 ~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~-~~~~~l~~~~~--------------------- 427 (783)
... . .|+|+++.|+..+.. +.|..+|+.++.. ...+... .....+..+.+
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLD----GTIRLWECGTGTT--IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEE--EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred CcEEEEEEcCCCCEEEEEcCC----CcEEEeECCCCce--eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 222 2 599999888755432 3588888876541 2222211 11112222222
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++.+++....++ .|.+||+.+++.+..+... .+.+..+.+++++..++++.+. -..++.+|+
T Consensus 256 s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~---dg~i~vwd~ 320 (420)
T 3vl1_A 256 GTYGKYVIAGHVSG--VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE---NGMLAQWDL 320 (420)
T ss_dssp SCTTEEEEEEETTS--CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET---TSEEEEEET
T ss_pred cCCCCEEEEEcCCC--eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC---CCeEEEEEc
Confidence 12255666666664 5889999888776666544 5667788888888744444332 257999999
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3e-07 Score=96.90 Aligned_cols=233 Identities=9% Similarity=0.030 Sum_probs=143.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc------ccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV------LKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~------~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
+..++|||||++|+.+. + ..|++||+.+++..... ........++|+||++.|+....
T Consensus 54 v~~~~~~~~~~~l~~~~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------- 117 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG--K----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---------- 117 (337)
T ss_dssp CCEEEECSSSSEEEEEC--B----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----------
T ss_pred eEEEEEecCCcEEEEcC--C----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC----------
Confidence 67789999999998764 2 46999999887633211 12223357899999998887662
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|+++++.+........+.... .....+.|+|||++|+..... ..|+++|+.++. ..
T Consensus 118 ------d~~i~~~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d----g~v~~~d~~~~~---------~~ 176 (337)
T 1gxr_A 118 ------ASTLSIWDLAAPTPRIKAELTSSA--PACYALAISPDSKVCFSCCSD----GNIAVWDLHNQT---------LV 176 (337)
T ss_dssp ------SSEEEEEECCCC--EEEEEEECSS--SCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---------EE
T ss_pred ------CCcEEEEECCCCCcceeeecccCC--CceEEEEECCCCCEEEEEeCC----CcEEEEeCCCCc---------ee
Confidence 236888888765422222233222 234678999999998865432 579999998731 11
Q ss_pred eeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 365 TVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 365 ~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
..+........ .|+|+++.|+..+. .+.|..+|+.++. ....+... .. +..+.+..++.+++....++
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~---~~~~~~~~-~~-v~~~~~s~~~~~l~~~~~~~- 246 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGR---QLQQHDFT-SQ-IFSLGYCPTGEWLAVGMESS- 246 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE---EEEEEECS-SC-EEEEEECTTSSEEEEEETTS-
T ss_pred eeeecccCceEEEEECCCCCEEEEEec----CCcEEEEECCCCc---eEeeecCC-Cc-eEEEEECCCCCEEEEEcCCC-
Confidence 12222222222 58899888876553 3468899987654 22223322 23 33444433344454555443
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|++||+.+++. ..+....+.+..+.+++++..++.... -..+..+|+
T Consensus 247 -~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~~~ 294 (337)
T 1gxr_A 247 -NVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGK----DNLLNAWRT 294 (337)
T ss_dssp -CEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEET
T ss_pred -cEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecC----CCcEEEEEC
Confidence 588999976654 445444566778888888876653322 357999998
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=98.97 E-value=4.3e-07 Score=95.74 Aligned_cols=234 Identities=11% Similarity=0.009 Sum_probs=141.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..+..++|||||++|+..... ..|+++|+.+++.... .. .......+.|+||++.|+....
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----------- 161 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS----------- 161 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET-----------
T ss_pred CcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC-----------
Confidence 347889999999999876532 4799999998873221 11 1222357899999998886662
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|+++++.+.. ....+.. .......+.|+|||++|+.... ...|+++|+.++. ...
T Consensus 162 -----dg~v~~~d~~~~~--~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~---------~~~ 219 (337)
T 1gxr_A 162 -----DGNIAVWDLHNQT--LVRQFQG--HTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGR---------QLQ 219 (337)
T ss_dssp -----TSCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE---------EEE
T ss_pred -----CCcEEEEeCCCCc--eeeeeec--ccCceEEEEECCCCCEEEEEec----CCcEEEEECCCCc---------eEe
Confidence 2257888886542 2222322 2234567899999999886542 2589999998731 111
Q ss_pred eecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 366 VIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 366 l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
.......... .|+|+|+.|++.+.. +.|..+++.++. ...+..+. . .+..+.+..++.+++....++ .
T Consensus 220 ~~~~~~~v~~~~~s~~~~~l~~~~~~----~~i~~~~~~~~~---~~~~~~~~-~-~v~~~~~~~~~~~l~~~~~dg--~ 288 (337)
T 1gxr_A 220 QHDFTSQIFSLGYCPTGEWLAVGMES----SNVEVLHVNKPD---KYQLHLHE-S-CVLSLKFAYCGKWFVSTGKDN--L 288 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETT----SCEEEEETTSSC---EEEECCCS-S-CEEEEEECTTSSEEEEEETTS--E
T ss_pred eecCCCceEEEEECCCCCEEEEEcCC----CcEEEEECCCCC---eEEEcCCc-c-ceeEEEECCCCCEEEEecCCC--c
Confidence 1111111122 588999888876543 458888987654 23333332 3 344444443355556666554 6
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|.+|++.+++.+..... .+.+..+.++++++.++.... -..+..||+
T Consensus 289 i~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~ 335 (337)
T 1gxr_A 289 LNAWRTPYGASIFQSKE-SSSVLSCDISVDDKYIVTGSG----DKKATVYEV 335 (337)
T ss_dssp EEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEET----TSCEEEEEE
T ss_pred EEEEECCCCeEEEEecC-CCcEEEEEECCCCCEEEEecC----CCeEEEEEE
Confidence 88999988876544332 345667777888776554332 235666654
|
| >1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=3.7e-10 Score=128.41 Aligned_cols=222 Identities=18% Similarity=0.151 Sum_probs=129.2
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhcc
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGR 608 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~ 608 (783)
+.|... +-++.|+.. .++.|+||++|||.... ....|... .+..+.|++|+.+|||.+. +|...- ...
T Consensus 91 sedcl~--lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~--~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~ 162 (537)
T 1ea5_A 91 SEDCLY--LNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGK--YLAYTEEVVLVSLSYRVGAFGFLALH--GSQ 162 (537)
T ss_dssp CSCCCE--EEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTH--HHHHHHTCEEEECCCCCHHHHHCCCT--TCS
T ss_pred CCcCCe--EEEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChH--HHHhcCCEEEEEeccCccccccccCC--CCC
Confidence 455544 455567653 36789999999985332 22234432 3443569999999999531 111000 000
Q ss_pred ccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcchhhhcc-cccc--
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALDMLRFN-KFTI-- 680 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~d~~~~~-~~~~-- 680 (783)
...+...+.|.++|++|+.++- ..||+||.|+|+|+||.+++.++.. ...+|+++|+.+|........ ....
T Consensus 163 ~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~~~~ 242 (537)
T 1ea5_A 163 EAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEGR 242 (537)
T ss_dssp SSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTTCTTSCBCHHHHH
T ss_pred CCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCccCCccccCHHHHH
Confidence 1122345899999999998752 3699999999999999999988875 245999999999975422110 0000
Q ss_pred --cccchhhhCCCC--CHHHHHHHHhcCcccCCCCCC---CCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCC
Q psy2521 681 --AYYSESEFGSPN--NKTHFHNLLSYSPLHNIKVPP---NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPY 753 (783)
Q Consensus 681 --~~~~~~~~g~p~--~~~~~~~~~~~sp~~~v~~~~---~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 753 (783)
........|.+. ..+..+.|++.++-.-+.... .....+ .+...-.-|..+.+.+..++.+.-+..
T Consensus 243 ~~~~~~a~~lgc~~~~~~~~~~cLr~~~~~~l~~a~~~~~~~~~~~-~~~f~PvvDg~~lp~~p~~~~~~g~~~------ 315 (537)
T 1ea5_A 243 RRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIF-RFSFVPVIDGEFFPTSLESMLNSGNFK------ 315 (537)
T ss_dssp HHHHHHHHHTTCCCSSHHHHHHHHHHSCHHHHHHHGGGGCSSSCSS-CCSSCCBCCSSSSSSCHHHHHHHTCSC------
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHhhCCHHHHHHHHhhhccccccc-cccceeeECcccCCcCHHHHHhcCCCC------
Confidence 011123346553 234466677665421110000 000000 111122346667777777665543333
Q ss_pred CCCcEEEEEeCCCCccC
Q psy2521 754 QKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 754 ~~~~~~l~~~~~~gHg~ 770 (783)
++|+.+=...++|+.|
T Consensus 316 -~vp~liG~~~~Eg~~f 331 (537)
T 1ea5_A 316 -KTQILLGVNKDEGSFF 331 (537)
T ss_dssp -CSCEEEEEETBTTHHH
T ss_pred -CCCEEEeeecchhHHH
Confidence 7899999999999865
|
| >2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=3.8e-10 Score=128.54 Aligned_cols=131 Identities=20% Similarity=0.170 Sum_probs=88.2
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCC-CCCChhHHhhcc
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGEDWHNAGR 608 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~~~~~~g~ 608 (783)
+.|...+ .++.|+.. ..++.|+||++|||.... ....+... .+..+.|++|+.+|||.+ -+|+.... ..
T Consensus 93 ~edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~--~la~~~g~vvv~~nYRlg~~Gf~~~~~--~~ 165 (543)
T 2ha2_A 93 SEDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGR--FLAQVEGAVLVSMNYRVGTFGFLALPG--SR 165 (543)
T ss_dssp ESCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTH--HHHHHHCCEEEEECCCCHHHHHCCCTT--CS
T ss_pred CCcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChH--HHHhcCCEEEEEecccccccccccCCC--CC
Confidence 4566544 45567652 245689999999985332 22234432 333436999999999953 12221100 00
Q ss_pred ccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 609 LLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
.......+.|+++|++|+.++ -..||+||.|+|+|+||.+++.++... +.+|+++|+.+|..
T Consensus 166 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 166 EAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 112234589999999999875 136999999999999999998887653 46999999999864
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=98.95 E-value=7.3e-07 Score=93.55 Aligned_cols=226 Identities=13% Similarity=0.089 Sum_probs=138.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..++|||||++|+.+... ..|++||+.+++.+.... .......+.|+|+++.|+....
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------------- 127 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF------------- 127 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-------------
T ss_pred CceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeC-------------
Confidence 347889999999999876532 479999999987654221 1222357899999998776552
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.++++.+.. ....+.. .......+.|+|||++|+....+ ..|.++|+.++. ....+.
T Consensus 128 ---d~~i~iwd~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~--------~~~~~~ 188 (312)
T 4ery_A 128 ---DESVRIWDVKTGK--CLKTLPA--HSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQ--------CLKTLI 188 (312)
T ss_dssp ---TSCEEEEETTTCC--EEEEECC--CSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC--------EEEEEC
T ss_pred ---CCcEEEEECCCCE--EEEEecC--CCCcEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCc--------eeeEEe
Confidence 2357888886543 1222222 22234678999999988755432 578999998731 112222
Q ss_pred cCcccee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC-ceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 368 PGMDHHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 368 ~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~-~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
....... ..|+|+|+.|+..+.. +.|..+|+.++. ....+..+... ..+.......++.+++....++ .
T Consensus 189 ~~~~~~~~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~ 260 (312)
T 4ery_A 189 DDDNPPVSFVKFSPNGKYILAATLD----NTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN--L 260 (312)
T ss_dssp CSSCCCEEEEEECTTSSEEEEEETT----TEEEEEETTTTE--EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS--C
T ss_pred ccCCCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCc--EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC--E
Confidence 2222222 2589999887765432 468888887654 12223222211 1122222223355666666664 6
Q ss_pred EEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 445 MDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
|++||+.+++.+..+......+..+.++|++..++
T Consensus 261 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 295 (312)
T 4ery_A 261 VYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIA 295 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred EEEEECCCchhhhhhhccCCcEEEEeecCcCCceE
Confidence 88999988887777776655666777888876655
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.94 E-value=1e-06 Score=93.96 Aligned_cols=238 Identities=13% Similarity=0.123 Sum_probs=142.2
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+.+... ..|++||+.+++.+.... .......++|+||++.|+....
T Consensus 34 ~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------------- 94 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKD-----SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-------------- 94 (369)
T ss_dssp CEEEEEECTTSCEEEEEESS-----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--------------
T ss_pred eEEEEEEcCCCCEEEEEeCC-----CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC--------------
Confidence 47889999999999876532 359999999987654221 2223368899999998876652
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC-CCCcEEEEEECCCCCCCc-cc--CCCCce
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN-TQGSDLHYFDLHSLPDGK-IS--GKFPLK 364 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~-~~~~~l~~~dl~~g~~~~-l~--~~~~~~ 364 (783)
...|+++++.+.. ....+.. ......+.|+|||++++...... .....|.++|+..+.... +. ...+..
T Consensus 95 --dg~i~iwd~~~~~--~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 95 --DYSIKLWDVSNGQ--CVATWKS---PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp --TTEEEEEETTTCC--EEEEEEC---SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred --CCeEEEEECCCCc--EEEEeec---CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 2368888887653 2233332 22346789999999998765431 122678888886631100 00 000111
Q ss_pred eeecCcc--ceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 365 TVIPGMD--HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 365 ~l~~~~~--~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
.+..... .... .|+++++.|+..+. .+.|..+|+.+.. .....+...... +..+.+..++.+++....++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~--~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~ 240 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHK----DGKISKYDVSNNY--EYVDSIDLHEKS-ISDMQFSPDLTYFITSSRDT 240 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEET----TSEEEEEETTTTT--EEEEEEECCSSC-EEEEEECTTSSEEEEEETTS
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcC----CCEEEEEECCCCc--EeEEEEecCCCc-eeEEEECCCCCEEEEecCCc
Confidence 1111111 1122 58999988776543 3468899987632 122223322233 33444433355555555554
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEe
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~s 483 (783)
.|.+||+.+++.+..+..+ ..+..+.+++++..+++...
T Consensus 241 --~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 241 --NSFLVDVSTLQVLKKYETD-CPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp --EEEEEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEEC
T ss_pred --eEEEEECCCCceeeeecCC-CCceeEEecCCCceEEEeec
Confidence 6899999888877666643 34556777888877766543
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=98.93 E-value=1.2e-06 Score=93.40 Aligned_cols=238 Identities=11% Similarity=0.092 Sum_probs=142.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+-+.. + ..|++||+.+++.+... ........++|+|||+.|+....
T Consensus 57 ~v~~~~~s~d~~~l~s~s~-D----g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~-------------- 117 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQ-D----GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL-------------- 117 (340)
T ss_dssp CEEEEEECTTSSEEEEEET-T----TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET--------------
T ss_pred ceEEEEECCCCCEEEEEeC-C----CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC--------------
Confidence 4778999999998875543 2 46999999988754322 12222357899999998876652
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+.++++.+.............+......+.|+++++ ++.. . ....|.++|+.++. ....+.
T Consensus 118 --d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~-s---~d~~i~~wd~~~~~---------~~~~~~ 181 (340)
T 1got_B 118 --DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTS-S---GDTTCALWDIETGQ---------QTTTFT 181 (340)
T ss_dssp --TCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEE-E---TTSCEEEEETTTTE---------EEEEEC
T ss_pred --CCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEE-E---CCCcEEEEECCCCc---------EEEEEc
Confidence 235777887765332222222222223445678899987 3322 2 22578999998741 111222
Q ss_pred Ccccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
+..... . .|+|+++.|+..+. .+.|..+|+.++. ....+... ...+..+.+..++.++++...++ .|.
T Consensus 182 ~h~~~v~~~~~~~~~~~l~sg~~----d~~v~~wd~~~~~---~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~d~--~v~ 251 (340)
T 1got_B 182 GHTGDVMSLSLAPDTRLFVSGAC----DASAKLWDVREGM---CRQTFTGH-ESDINAICFFPNGNAFATGSDDA--TCR 251 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCS---EEEEECCC-SSCEEEEEECTTSSEEEEEETTS--CEE
T ss_pred CCCCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCe---eEEEEcCC-cCCEEEEEEcCCCCEEEEEcCCC--cEE
Confidence 222222 2 48898876654333 2458888887654 22223222 22344444443355666666664 688
Q ss_pred EEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+||+.+++.+..+..+ ...+..+.+++++..++.... -..+..+|+
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----d~~i~vwd~ 299 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD----DFNCNVWDA 299 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----TSEEEEEET
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC----CCeEEEEEc
Confidence 9999777765555543 345677888888876664433 257899998
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.92 E-value=9.3e-08 Score=101.31 Aligned_cols=252 Identities=10% Similarity=0.068 Sum_probs=131.3
Q ss_pred EEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECC
Q psy2521 164 QRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD 243 (783)
Q Consensus 164 ~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~ 243 (783)
+++|.++|...... +.-.+|..+..++..+.+..... .+ ....++|||||++|+++...+ ..|+++|+.
T Consensus 46 spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~s~dg~~l~~~~~~~----~~i~~~d~~ 114 (343)
T 1ri6_A 46 SPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAESAL---PG--SLTHISTDHQGQFVFVGSYNA----GNVSVTRLE 114 (343)
T ss_dssp CTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEC---SS--CCSEEEECTTSSEEEEEETTT----TEEEEEEEE
T ss_pred CCCCCEEEEeecCC--CeEEEEEecCCCCceeecccccc---CC--CCcEEEEcCCCCEEEEEecCC----CeEEEEECC
Confidence 45677776655332 34555555432334333321110 11 356789999999988776433 358888884
Q ss_pred CC---ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC-Ccee--EEecCCCCe
Q psy2521 244 TG---KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIP--VVEFPNGRS 317 (783)
Q Consensus 244 tg---~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-~d~~--v~~~~~~~~ 317 (783)
.| +.+...........++|+|||+.|+.+... ...|+++++.+... .... ....+.. .
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~ 178 (343)
T 1ri6_A 115 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK---------------QDRICLFTVSDDGHLVAQDPAEVTTVEG-A 178 (343)
T ss_dssp TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG---------------GTEEEEEEECTTSCEEEEEEEEEECSTT-C
T ss_pred CCccccccccccCCCCceEEEECCCCCEEEEecCC---------------CCEEEEEEecCCCceeeecccccccCCC-C
Confidence 33 222221122233578999999988766521 23688888865221 1111 1222221 1
Q ss_pred eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec----Ccc---ce-eEEEEeeCCEEEEEEC
Q psy2521 318 LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP----GMD---HH-HEIIANNGPELIVKTT 389 (783)
Q Consensus 318 ~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~----~~~---~~-~~~~s~dg~~l~~~t~ 389 (783)
....+.|+|||++|++.... ...+.++++... ...+ ....... +.. .. .-.|+|||+.||+...
T Consensus 179 ~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 179 GPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDP-HGNI----ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp CEEEEEECTTSSEEEEEETT---TTEEEEEESSCT-TSCC----EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred CcceEEECCCCCEEEEEeCC---CCEEEEEEecCC-CCcE----EEEeeccccCccccccCCccceEECCCCCEEEEEec
Confidence 23468899999998776422 368889998541 1111 0011111 101 11 1259999998876543
Q ss_pred CCCCCceEEEEcCC--CCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 390 KNAPKGKVVTINLN--NPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 390 ~~~~~~~L~~~d~~--~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
. ...|..++++ ++... ....++.. .......+..+++.|++....++.-.++.+|..+|+.
T Consensus 251 ~---~~~i~v~d~~~~~~~~~-~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 251 T---ASLITVFSVSEDGSVLS-KEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp T---TTEEEEEEECTTSCCEE-EEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred C---CCEEEEEEEcCCCCceE-EeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 2 3457777765 32211 11223322 2222223344545666665556655566667766653
|
| >3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.3e-09 Score=107.07 Aligned_cols=200 Identities=13% Similarity=0.039 Sum_probs=117.5
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCE--EEEEecCCCCCC--C-Chh--HH-----hhccccCCcC----hHHH
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG--IYAIPNIRGGGE--L-GED--WH-----NAGRLLKKQN----CFDD 618 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~RG~g~--~-G~~--~~-----~~g~~~~~~~----~~~D 618 (783)
.+.||++||..+.... |.. +...|.+.|+ .|+.+|+++.|. + |.- +. ..+...+... ..++
T Consensus 6 ~~pvvliHG~~~~~~~--~~~-l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 6 TTATLFLHGYGGSERS--ETF-MVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CEEEEEECCTTCCGGG--THH-HHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCcEEEECCCCCChhH--HHH-HHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 4568889997665544 443 4456676786 478888886442 1 110 00 0011111111 2456
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-----ceeEEEEcCCcchhhhcccccccccchhhhCCCCC
Q psy2521 619 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAALILVGALDMLRFNKFTIAYYSESEFGSPNN 693 (783)
Q Consensus 619 ~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-----lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~ 693 (783)
+.+++++|.++- ..+++.++||||||.++..++.++|+ ..+.+|+..+..+-...............-|.|..
T Consensus 83 l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~ 160 (249)
T 3fle_A 83 IKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSS
T ss_pred HHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcc
Confidence 777888887763 34589999999999999999988874 57778777665543321110000000112355532
Q ss_pred -HHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC-
Q psy2521 694 -KTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD- 765 (783)
Q Consensus 694 -~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~- 765 (783)
...|+.|.+..+ .+.. ..+| +|.++|+ .|..||...++.+...++.. ...+...++.+
T Consensus 161 ~~~~~~~l~~~~~--~~p~----~~~~-vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~-------~~~y~e~~v~g~ 226 (249)
T 3fle_A 161 MNAAYRQLLSLYK--IYCG----KEIE-VLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGS-------TKSYQEMKFKGA 226 (249)
T ss_dssp CCHHHHHTGGGHH--HHTT----TTCE-EEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTC-------SSEEEEEEEESG
T ss_pred cCHHHHHHHHHHh--hCCc----cCCe-EEEEeccCCCCCCCCCcccHHHHHHHHHHHhhC-------CCceEEEEEeCC
Confidence 244554433321 1221 2344 9999998 79999998887666656554 55666666655
Q ss_pred -CCccCCcc
Q psy2521 766 -AGHGQGKA 773 (783)
Q Consensus 766 -~gHg~~~~ 773 (783)
+.|.....
T Consensus 227 ~a~Hs~l~~ 235 (249)
T 3fle_A 227 KAQHSQLHE 235 (249)
T ss_dssp GGSTGGGGG
T ss_pred CCchhcccc
Confidence 88987654
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=2.5e-07 Score=97.97 Aligned_cols=249 Identities=11% Similarity=0.012 Sum_probs=131.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECC--CCcccccc-c-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYPEV-L-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~--tg~~~~~~-~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
...++|||||++|+++...+ ..|.+++++ +|+..... . .......++|+|||+.|+++...
T Consensus 40 ~~~~~~spdg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------- 104 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN----------- 104 (343)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT-----------
T ss_pred CceEEECCCCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC-----------
Confidence 45689999999988776532 357777776 77643221 1 11234689999999988877621
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC-CCCCcccCCCCce-
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-LPDGKISGKFPLK- 364 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~-g~~~~l~~~~~~~- 364 (783)
...|+++++..+ .....+....... ....+.|+|||++|++.... ...|+++|+.+ +. +. ...
T Consensus 105 ----~~~i~~~d~~~~-~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~---~~~v~~~d~~~~~~---~~---~~~~ 169 (343)
T 1ri6_A 105 ----AGNVSVTRLEDG-LPVGVVDVVEGLD-GCHSANISPDNRTLWVPALK---QDRICLFTVSDDGH---LV---AQDP 169 (343)
T ss_dssp ----TTEEEEEEEETT-EEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGG---GTEEEEEEECTTSC---EE---EEEE
T ss_pred ----CCeEEEEECCCC-ccccccccccCCC-CceEEEECCCCCEEEEecCC---CCEEEEEEecCCCc---ee---eecc
Confidence 235777776411 1111221111111 12467899999998765422 25799999876 21 10 000
Q ss_pred -eeecCcc-c-eeEEEEeeCCEEEEEECCCCCCceEEEEcCCC--CCCCCcEEe--ecCC--CCceEEEE-EEeeCCEEE
Q psy2521 365 -TVIPGMD-H-HHEIIANNGPELIVKTTKNAPKGKVVTINLNN--PCEKNWKTL--IPED--ENRTLDVV-AAVANNKLI 434 (783)
Q Consensus 365 -~l~~~~~-~-~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~--~~~~~~~~l--i~~~--~~~~l~~~-~~~~g~~l~ 434 (783)
.+..... . ..-.|+|+|+.+++.... ...|..++++. +.......+ ++.. .......+ +..+++.|+
T Consensus 170 ~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 170 AEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp EEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE
T ss_pred cccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE
Confidence 1111111 1 112599999988876543 24577777743 321111111 1211 01112233 334445676
Q ss_pred EEEecCCeeEEEEEECC--CCc--eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 435 VHYIQNVRSVMDLHDLN--TGK--RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~--~G~--~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+....+ ..|.+|++. +|+ .+..+... +.+..+.++++++.+++... ...--.+|.+|.
T Consensus 247 v~~~~~--~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~-~~~~v~v~~~d~ 308 (343)
T 1ri6_A 247 ACDRTA--SLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQ-KSHHISVYEIVG 308 (343)
T ss_dssp EEETTT--TEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECT-TTCEEEEEEEET
T ss_pred EEecCC--CEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecC-CCCeEEEEEEcC
Confidence 655444 467788875 333 22333332 22556677888887776442 222233455566
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=98.90 E-value=9.8e-08 Score=102.90 Aligned_cols=240 Identities=9% Similarity=0.042 Sum_probs=135.2
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc---cc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~---~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+..++|||||+.|+- ... .+|++||+.+++.+.. .. .......++|+|||+.|+-...
T Consensus 96 ~V~~~~~s~d~~~l~~--s~d----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---------- 159 (357)
T 4g56_B 96 GVTDVAWVSEKGILVA--SDS----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---------- 159 (357)
T ss_dssp CEEEEEEETTTEEEEE--ETT----SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET----------
T ss_pred CEEEEEEcCCCCEEEE--ECC----CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC----------
Confidence 3778999999987652 222 3599999998874321 11 1112357899999998876552
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|.++++.+.. .+..+.. .......+.++|+++.+++.... ...|.++|+.++... ...
T Consensus 160 ------dg~v~iwd~~~~~--~~~~~~~--h~~~v~~v~~s~~~~~~~~s~~~---dg~v~~wd~~~~~~~------~~~ 220 (357)
T 4g56_B 160 ------DFSVKVWDLSQKA--VLKSYNA--HSSEVNCVAACPGKDTIFLSCGE---DGRILLWDTRKPKPA------TRI 220 (357)
T ss_dssp ------TSCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTCSSCEEEEET---TSCEEECCTTSSSCB------CBC
T ss_pred ------CCeEEEEECCCCc--EEEEEcC--CCCCEEEEEEccCCCceeeeecc---CCceEEEECCCCcee------eee
Confidence 2257788876542 2223332 22234678999999866655443 257889999874210 000
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEE-EeeCCEEEEEEecCCe
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA-AVANNKLIVHYIQNVR 442 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~-~~~g~~l~~~~~~~g~ 442 (783)
........... .|+|+++.++..... ...|..+|+.++. ....+..+. .. +..+. .++++.++++...|+
T Consensus 221 ~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~~--~~~~~~~~~-~~-v~~l~~sp~~~~~lasgs~D~- 292 (357)
T 4g56_B 221 DFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNPD--SAQTSAVHS-QN-ITGLAYSYHSSPFLASISEDC- 292 (357)
T ss_dssp CCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCGG--GCEEECCCS-SC-EEEEEECSSSSCCEEEEETTS-
T ss_pred eeccccccccchhhhhcccceEEEeec---ccceeEEECCCCc--EeEEEeccc-ee-EEEEEEcCCCCCEEEEEeCCC-
Confidence 01111111122 488887766655433 2458888987754 233443333 33 33443 345456677776665
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
.|++||+++|+.++.+ ...+.|..+.++|.+..++++.+. -.+|..+|+.
T Consensus 293 -~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~---Dg~v~iW~~~ 342 (357)
T 4g56_B 293 -TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGW---DHKVLHHHLP 342 (357)
T ss_dssp -CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEET---TSCEEEEECC
T ss_pred -EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcC---CCeEEEEECC
Confidence 5889999888765544 235567788888744444444433 2468888883
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.90 E-value=6.8e-08 Score=105.62 Aligned_cols=254 Identities=11% Similarity=0.071 Sum_probs=142.1
Q ss_pred EeeEEECCCCcEEEEEEecCC------CceEEEEEEECCCCcc---ccccccccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSG------SDWNTLHIKDVDTGKD---YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G------~d~~~i~v~Dl~tg~~---~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
+..++|||||+.++++.+..| +....|++||+.+++. +...........++|+||++.|+....+
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------ 88 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN------ 88 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS------
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC------
Confidence 456889999995555554444 4456899999998863 2212222234689999999988776622
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC-CcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC-GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD-Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
..|.++++.+.......+............+.|+|| +++|+... ....|+++|+.++... .. .
T Consensus 89 ----------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~----~dg~v~iwd~~~~~~~-~~-~ 152 (416)
T 2pm9_A 89 ----------GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG----NNGEIFIWDMNKCTES-PS-N 152 (416)
T ss_dssp ----------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC----SSSCEEBCBTTTTSSC-TT-T
T ss_pred ----------CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc----CCCeEEEEECCCCccc-cc-c
Confidence 257777876632111123222222223457899999 66665432 2257999999874200 00 0
Q ss_pred CCceee--ecCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-----CceEEEEEEe-eC
Q psy2521 361 FPLKTV--IPGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAV-AN 430 (783)
Q Consensus 361 ~~~~~l--~~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-----~~~l~~~~~~-~g 430 (783)
.....+ ....... .. .|++++..+++.... .+.|..+|+.++. ....+.... ...+..+.+. ++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS---SNFASIWDLKAKK---EVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS---SSCEEEEETTTTE---EEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcC---CCCEEEEECCCCC---cceEEeccccccccCCceEEEEECCCC
Confidence 000001 1111111 22 588985555555544 3458888987654 222222210 2334444444 43
Q ss_pred CEEEEEEecCC-eeEEEEEECCCC-ceeeeec-CCCeEEEeeeccc-cccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNV-RSVMDLHDLNTG-KRLHSFP-LDLGQITHISGRR-KYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g-~~~l~~~dl~~G-~~~~~l~-~~~g~v~~~s~~~-d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+++....++ ...|.+||+.++ +.+..+. ...+.+..+.+++ ++..++ +.+. -..+..+|+
T Consensus 227 ~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~-s~~~---dg~v~~wd~ 292 (416)
T 2pm9_A 227 STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL-SSGR---DNTVLLWNP 292 (416)
T ss_dssp TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE-EEES---SSEEEEECS
T ss_pred CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE-EEeC---CCCEEEeeC
Confidence 35666655553 337899999776 3444554 3455677888888 554444 3332 347999998
|
| >1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ... | Back alignment and structure |
|---|
Probab=98.90 E-value=2.3e-09 Score=121.84 Aligned_cols=131 Identities=22% Similarity=0.188 Sum_probs=88.5
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCC---ccCCcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhcc
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGV---SVLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGR 608 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~---~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~ 608 (783)
+.|.. .+-++.|+.. .++.|+||++|||... .....|... .+..+.|++|+.+|||.+. +|+..... .
T Consensus 89 ~edcl--~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~--~la~~~~~vvv~~nYRlg~~Gf~~~~~~--~ 160 (529)
T 1p0i_A 89 SEDCL--YLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGK--FLARVERVIVVSMNYRVGALGFLALPGN--P 160 (529)
T ss_dssp CSCCC--EEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTH--HHHHHHCCEEEEECCCCHHHHHCCCTTC--T
T ss_pred CCcCC--eEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccChH--HHhccCCeEEEEecccccccccccCCCC--C
Confidence 34544 4456677653 2678999999998533 222234432 3334369999999999531 12110000 0
Q ss_pred ccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcch
Q psy2521 609 LLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALD 671 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d 671 (783)
...+...+.|+++|++|+.++ -..||+||.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 161 ~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~ 228 (529)
T 1p0i_A 161 EAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFN 228 (529)
T ss_dssp TSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTT
T ss_pred CCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCccc
Confidence 112233588999999999875 237999999999999999999988763 359999999999764
|
| >2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.4e-09 Score=124.13 Aligned_cols=125 Identities=15% Similarity=0.108 Sum_probs=83.8
Q ss_pred EEEEEEEe-----cCcCCCCC----ccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHh
Q psy2521 539 VPMYIIHR-----VGALRNRR----NPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHN 605 (783)
Q Consensus 539 v~~~~~~p-----~~~~~~~~----~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~ 605 (783)
+.+.++.| .. ...++ .|+||++|||.... ....+.. ..|+++|++|+.+|||.+. +|...
T Consensus 91 L~lnv~~P~~~~~~~-~~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~l~~~g~vvv~~nYRl~~~Gf~~~--- 163 (551)
T 2fj0_A 91 IHANIHVPYYALPRD-AADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGP---EYLVSKDVIVITFNYRLNVYGFLSL--- 163 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBC---TTGGGGSCEEEEECCCCHHHHHCCC---
T ss_pred eEEEEEecCcccccc-ccccCcCCCCCEEEEEcCCccccCCCcccccCH---HHHHhCCeEEEEeCCcCCccccccC---
Confidence 45566677 32 12234 89999999985332 2222332 2344579999999999741 11110
Q ss_pred hccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcc
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGAL 670 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~ 670 (783)
......+...+.|++++++|+.++ -..||+||.|+|+|+||.+++.++.. .+.+|+++|+.+|..
T Consensus 164 ~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 164 NSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp SSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 000112334589999999999875 23699999999999999999998876 356999999999864
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=98.89 E-value=1.2e-06 Score=91.96 Aligned_cols=236 Identities=14% Similarity=0.169 Sum_probs=138.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+.+... ..|++||+.+++...... .......++|+||++.|+....
T Consensus 25 ~v~~~~~s~~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------------- 85 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSAD-----KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD-------------- 85 (312)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET--------------
T ss_pred cEEEEEECCCCCEEEEeeCC-----CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC--------------
Confidence 47789999999998876432 359999999887543221 2222357899999998876662
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...|.++++.+.. .+..+... ......+.|+|++++|+....+ ..|.++|+.++. ....+.
T Consensus 86 --d~~i~vwd~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~---------~~~~~~ 146 (312)
T 4ery_A 86 --DKTLKIWDVSSGK--CLKTLKGH--SNYVFCCNFNPQSNLIVSGSFD----ESVRIWDVKTGK---------CLKTLP 146 (312)
T ss_dssp --TSEEEEEETTTCC--EEEEEECC--SSCEEEEEECSSSSEEEEEETT----SCEEEEETTTCC---------EEEEEC
T ss_pred --CCEEEEEECCCCc--EEEEEcCC--CCCEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCE---------EEEEec
Confidence 2368888887643 22233322 2245678999999998754332 579999998731 111122
Q ss_pred Ccccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
...... . .|+++|+.|+..+.. +.|..+|+.++. ....+.... ...+..+.+..++..++....++ .|.
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~wd~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~--~i~ 217 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGSLIVSSSYD----GLCRIWDTASGQ--CLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN--TLK 217 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC--EEEEECCSS-CCCEEEEEECTTSSEEEEEETTT--EEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCc--eeeEEeccC-CCceEEEEECCCCCEEEEEcCCC--eEE
Confidence 222222 2 488998877654432 358888887654 123333333 33344444443355555555554 689
Q ss_pred EEECCCCceeeeecCCC---eEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDL---GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~---g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+||+.+++.+..+.... ..+ .......+..++++. ..-..++.+|+
T Consensus 218 iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~sg---~~dg~i~vwd~ 266 (312)
T 4ery_A 218 LWDYSKGKCLKTYTGHKNEKYCI-FANFSVTGGKWIVSG---SEDNLVYIWNL 266 (312)
T ss_dssp EEETTTTEEEEEECSSCCSSSCC-CEEEECSSSCEEEEC---CTTSCEEEEET
T ss_pred EEECCCCcEEEEEEecCCceEEE-EEEEEeCCCcEEEEE---CCCCEEEEEEC
Confidence 99998887766665431 111 111122223333332 23357888998
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.8e-07 Score=101.14 Aligned_cols=246 Identities=11% Similarity=-0.017 Sum_probs=139.4
Q ss_pred EEECCCCcEEEEEEecC------CCceEEEEEEECCCCcccc--c----cc--cc--cccCeeEEeeCCCEEEEEEeecC
Q psy2521 214 YAFSDNGKHFAYCLSKS------GSDWNTLHIKDVDTGKDYP--E----VL--KN--VKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~------G~d~~~i~v~Dl~tg~~~~--~----~~--~~--~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
.+++||++.++.....+ |+....+++++++++.... . .. .. .....++|||||+.++..+.
T Consensus 77 ~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~--- 153 (365)
T 4h5i_A 77 TAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASS--- 153 (365)
T ss_dssp CEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEES---
T ss_pred EEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEEC---
Confidence 35677888888765542 3334567888776543211 0 00 00 01125899999999887762
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
..+..|+++++.+.. .+..++.. ....++.|||||++|+.... ..+.+++..++. .
T Consensus 154 -----------~~d~~i~iwd~~~~~--~~~~~~~~---~~V~~v~fspdg~~l~s~s~-----~~~~~~~~~~~~--~- 209 (365)
T 4h5i_A 154 -----------KVPAIMRIIDPSDLT--EKFEIETR---GEVKDLHFSTDGKVVAYITG-----SSLEVISTVTGS--C- 209 (365)
T ss_dssp -----------CSSCEEEEEETTTTE--EEEEEECS---SCCCEEEECTTSSEEEEECS-----SCEEEEETTTCC--E-
T ss_pred -----------CCCCEEEEeECCCCc--EEEEeCCC---CceEEEEEccCCceEEeccc-----eeEEEEEeccCc--c-
Confidence 223468888887643 22222222 12357899999999876431 346667766531 0
Q ss_pred cCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE-EeecCCCCceEEEEEEeeCCEEE
Q psy2521 358 SGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK-TLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 358 ~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~-~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
.............. .|+|||+.++..+..+.....+..+++........+ ..+... ...+..+.+..++.++
T Consensus 210 ----~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~V~~~~~Spdg~~l 284 (365)
T 4h5i_A 210 ----IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNR-FKGITSMDVDMKGELA 284 (365)
T ss_dssp ----EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESS-CSCEEEEEECTTSCEE
T ss_pred ----eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCC-CCCeEeEEECCCCCce
Confidence 01111111122222 489999888776655444445666776543210000 112222 2233444443336666
Q ss_pred EEEecCCeeEEEEEECCCCceeeeec-CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~~~l~-~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
+....|+ .|.+||+.+|+.+..+. ...+.|..+.++||+..|+ +.+. -.+|..+|+.
T Consensus 285 asgs~D~--~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la-S~S~---D~tvrvw~ip 342 (365)
T 4h5i_A 285 VLASNDN--SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA-SVSA---ANTIHIIKLP 342 (365)
T ss_dssp EEEETTS--CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE-EEET---TSEEEEEECC
T ss_pred EEEcCCC--EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE-EEeC---CCeEEEEEcC
Confidence 6666664 58999998898777653 3466788888999987554 3332 2478888873
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.85 E-value=5.3e-06 Score=89.81 Aligned_cols=247 Identities=10% Similarity=0.051 Sum_probs=130.6
Q ss_pred eEEECCCCcEEEEEEec-----CCCceEEEEEEECCCCcccccc-cc-------ccccCeeEEeeCCCEEEEEEeecCCC
Q psy2521 213 LYAFSDNGKHFAYCLSK-----SGSDWNTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDING 279 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~-----~G~d~~~i~v~Dl~tg~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~ 279 (783)
++.+||||++|.++... .|.....|.++|+++++.+... .. +.....+.|||||++||+.....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~--- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA--- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC---
Confidence 79999999998877532 2222356899999987765321 11 11234789999999999876321
Q ss_pred CCCCCcccccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc
Q psy2521 280 TADGTETTAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 280 ~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|..++ .+.. ++.. .+- +. .+...|+|+..++.... ...+.++|+ ++.....
T Consensus 147 -----------~~~v~viD-~t~~----~~~~~i~~-~~---~~~~~~~~~~~~~~~~~---dg~~~~vd~-~g~~~~~- 201 (373)
T 2mad_H 147 -----------GPAVGLVV-QGGS----SDDQLLSS-PT---CYHIHPGAPSTFYLLCA---QGGLAKTDH-AGGAAGA- 201 (373)
T ss_pred -----------CCeEEEEE-CCCC----EEeEEcCC-Cc---eEEEEeCCCceEEEEcC---CCCEEEEEC-CCcEEEE-
Confidence 23577777 5542 2222 211 11 12344555544333221 134555555 4210000
Q ss_pred CCCCceeeecCccc--eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEE--eecC-------CCCceEEEEEE
Q psy2521 359 GKFPLKTVIPGMDH--HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT--LIPE-------DENRTLDVVAA 427 (783)
Q Consensus 359 ~~~~~~~l~~~~~~--~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~--li~~-------~~~~~l~~~~~ 427 (783)
........+... ....++++++.++|.+.. ..++.+|+.+........ +... .+.....-...
T Consensus 202 --~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s 275 (373)
T 2mad_H 202 --GLVGAMLTAAQNLLTQPAQANKSGRIVWPVYS----GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYL 275 (373)
T ss_pred --EeccccccCCcceeecceeEecCCEEEEEcCC----ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEEC
Confidence 000000011111 112367778888887632 368999986543110011 1000 00010001123
Q ss_pred eeCCEEEEEEecC-------CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 428 VANNKLIVHYIQN-------VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 428 ~~g~~l~~~~~~~-------g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++++|+..... ....|+++|+++++.+..|+.+. ...++..++|++.++|..+.. -.++..+|+
T Consensus 276 ~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~--~~~V~ViD~ 348 (373)
T 2mad_H 276 KSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAG--TEVLHIYDA 348 (373)
T ss_pred CCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCC--CCeEEEEEC
Confidence 3446777755421 23579999998888888887653 244667789988555544322 258999999
|
| >3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P | Back alignment and structure |
|---|
Probab=98.85 E-value=1.4e-08 Score=107.57 Aligned_cols=105 Identities=17% Similarity=0.205 Sum_probs=66.6
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHc-CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRH-FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
..|+||++||+.+... .|... ...|.+ .+|.|+++|+||.|... ........-....+|+.+.++.|.. + .
T Consensus 37 ~~p~lvllHG~~~~~~--~w~~~-~~~L~~~~~~~via~Dl~GhG~S~---~~~~~~~~~~~~a~dl~~~l~~l~~-~-~ 108 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSAL--SWAVF-TAAIISRVQCRIVALDLRSHGETK---VKNPEDLSAETMAKDVGNVVEAMYG-D-L 108 (316)
T ss_dssp SSCEEEEECCTTCCGG--GGHHH-HHHHHTTBCCEEEEECCTTSTTCB---CSCTTCCCHHHHHHHHHHHHHHHHT-T-C
T ss_pred CCcEEEEECCCCcccc--cHHHH-HHHHhhcCCeEEEEecCCCCCCCC---CCCccccCHHHHHHHHHHHHHHHhc-c-C
Confidence 4588999999865543 34443 345653 28999999999955432 1100001111223455555555532 1 1
Q ss_pred CCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVG 668 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~ 668 (783)
++++.|+||||||.+++.++.+ +|+ ++++|+..+
T Consensus 109 -~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 109 -PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp -CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred -CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 2689999999999999999885 587 788877654
|
| >3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus} | Back alignment and structure |
|---|
Probab=98.85 E-value=9.6e-09 Score=105.91 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=66.1
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
.+..|.||++||+.+.... |... .. |. .||.|+.+|+||. +.. ......++++.+.+..+++.-
T Consensus 18 ~~~~~~lv~lhg~~~~~~~--~~~~-~~-l~-~~~~v~~~d~~G~---~~~-------~~~~~~~~~~~~~~~~~i~~~- 81 (265)
T 3ils_A 18 MVARKTLFMLPDGGGSAFS--YASL-PR-LK-SDTAVVGLNCPYA---RDP-------ENMNCTHGAMIESFCNEIRRR- 81 (265)
T ss_dssp TTSSEEEEEECCTTCCGGG--GTTS-CC-CS-SSEEEEEEECTTT---TCG-------GGCCCCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCCCHHH--HHHH-Hh-cC-CCCEEEEEECCCC---CCC-------CCCCCCHHHHHHHHHHHHHHh-
Confidence 3566889999998776544 3322 23 55 5999999999994 211 111234555554433333321
Q ss_pred CCCCcEEEEEeChhHHHHHHHHh---cCCCceeEEEEcCC
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLN---QRPELYGAALILVG 668 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~---~~p~lf~a~i~~~~ 668 (783)
....++.++|||+||.++..++. .+|+....+|...+
T Consensus 82 ~~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~ 121 (265)
T 3ils_A 82 QPRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDA 121 (265)
T ss_dssp CSSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred CCCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcC
Confidence 12248999999999999999887 67887888877654
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=98.85 E-value=1.2e-06 Score=101.54 Aligned_cols=206 Identities=11% Similarity=0.068 Sum_probs=119.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|||||++||-... ..+|+|||+.+++... .++ .......++|+|||+.|+....+.
T Consensus 61 ~v~~~~~spdg~~lasg~~-----d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~---------- 125 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDV-----HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR---------- 125 (611)
T ss_dssp CEEEEEECTTSSEEEEEET-----TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS----------
T ss_pred ceEEEEECCCCcEEEEEeC-----CCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCC----------
Confidence 4788999999999986643 2579999998765322 121 122335899999999988766321
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.....|+.++.+.... .+. .+......+.|+||+++++++.+. ...|.++|..++. ....
T Consensus 126 --~~~~~v~~wd~~~~~~----~l~--gh~~~v~~v~f~p~~~~~l~s~s~---D~~v~lwd~~~~~---------~~~~ 185 (611)
T 1nr0_A 126 --ERFGHVFLFDTGTSNG----NLT--GQARAMNSVDFKPSRPFRIISGSD---DNTVAIFEGPPFK---------FKST 185 (611)
T ss_dssp --SCSEEEEETTTCCBCB----CCC--CCSSCEEEEEECSSSSCEEEEEET---TSCEEEEETTTBE---------EEEE
T ss_pred --CceeEEEEeeCCCCcc----eec--CCCCCceEEEECCCCCeEEEEEeC---CCeEEEEECCCCe---------Eeee
Confidence 1233677776543211 112 122345688999999875555443 2568888876521 1122
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC------CCCceEEEEEEeeCCEEEEEEe
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE------DENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~------~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
+.+...... .|+|||+.|+-.+.. ..|..+|+.++. ....+.. .....+..+.+..++.++++..
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D----~~i~lwd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGD----GTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred eccccCceEEEEECCCCCEEEEEECC----CcEEEEECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 333333222 599999877654432 357778876554 1222211 1122333444443355566666
Q ss_pred cCCeeEEEEEECCCCceeeee
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l 459 (783)
.|+ .|.+||+.+++.+..+
T Consensus 259 ~D~--~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 259 ADK--TIKIWNVATLKVEKTI 277 (611)
T ss_dssp TTS--EEEEEETTTTEEEEEE
T ss_pred CCC--eEEEEeCCCCceeeee
Confidence 664 6888888777654443
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.84 E-value=3.7e-07 Score=105.29 Aligned_cols=238 Identities=10% Similarity=0.031 Sum_probs=142.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC----cccccc-ccccc-cCeeEEee--CCCEEEEEEeecCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG----KDYPEV-LKNVK-FPSISWTH--DHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg----~~~~~~-~~~~~-~~~~~Wsp--Dg~~l~y~~~~~~~~~~~ 282 (783)
+..++|||||++||+..+ ..|+++|++++ +..... ..... ...++|+| |++.|+....
T Consensus 21 v~~~~~spdg~~l~~~~~------~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~-------- 86 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCG------KSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE-------- 86 (615)
T ss_dssp CCCCEEETTTTEEEEEET------TEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET--------
T ss_pred eeEEEECCCCCEEEEecC------CeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC--------
Confidence 667899999999999862 26999999988 543321 12222 36889999 9998876662
Q ss_pred CCcccccCCceEEEEEcCCC------CCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc
Q psy2521 283 GTETTAHMGQKIYYHVLGTE------QDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 356 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~------~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~ 356 (783)
...|.++++.++ .......+... ......+.|+|||++|+...........|+++|...
T Consensus 87 --------dg~v~vw~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~----- 151 (615)
T 1pgu_A 87 --------SGKVIVWGWTFDKESNSVEVNVKSEFQVL--AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGN----- 151 (615)
T ss_dssp --------TSEEEEEEEEEEGGGTEEEEEEEEEEECC--SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCC-----
T ss_pred --------CCEEEEEeCCCCcccccccccccchhhcc--cccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCC-----
Confidence 225777777432 11111222222 223568899999999987765433336788887332
Q ss_pred ccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC--ceEEEEEEeeC-C
Q psy2521 357 ISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN--RTLDVVAAVAN-N 431 (783)
Q Consensus 357 l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~--~~l~~~~~~~g-~ 431 (783)
....+.+...... .|+|+++.+++.... ...|..+|+.+.. ....+..... ..+..+.+..+ +
T Consensus 152 ------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (615)
T 1pgu_A 152 ------SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFK---FSASDRTHHKQGSFVRDVEFSPDSG 219 (615)
T ss_dssp ------EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBE---EEEEECSSSCTTCCEEEEEECSTTC
T ss_pred ------cceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCcc---eeeeecccCCCCceEEEEEECCCCC
Confidence 1111222222222 589998854444433 3468888876643 2222332212 03445554443 4
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeee-c---CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSF-P---LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l-~---~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++....++ .|.+||+.+++.+..+ . ...+.+..+.++ ++..++.. +. -..+..+|+
T Consensus 220 ~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~-~~---d~~i~~wd~ 281 (615)
T 1pgu_A 220 EFVITVGSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV-GA---DATIRVWDV 281 (615)
T ss_dssp CEEEEEETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE-ET---TSEEEEEET
T ss_pred CEEEEEeCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE-cC---CCcEEEEEC
Confidence 5555555553 6899999888887777 3 335566677777 65555433 22 257889998
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.84 E-value=9.3e-08 Score=101.04 Aligned_cols=219 Identities=10% Similarity=-0.015 Sum_probs=127.0
Q ss_pred EEEEEEECCCCccccccc-ccc--ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 235 NTLHIKDVDTGKDYPEVL-KNV--KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~-~~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
..|+++|+++++.+.... ... ....++|+|||+.+|++... ...|+++++.+... +..+.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---------------~~~v~~~d~~~~~~--~~~~~ 73 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---------------SESLVKIDLVTGET--LGRID 73 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---------------TTEEEEEETTTCCE--EEEEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---------------CCeEEEEECCCCCe--EeeEE
Confidence 469999999998664332 221 24689999999998887621 24688888876532 11222
Q ss_pred cCCCC---eeEEEEEEecCCcEEEEEEec-----CC---CCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEee
Q psy2521 312 FPNGR---SLGLHSEVTDCGRYLLVSTSN-----NT---QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANN 380 (783)
Q Consensus 312 ~~~~~---~~~~~~~~SpDGk~l~~~~~~-----~~---~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~d 380 (783)
.+... .....+.|||||++|++.... .. ....|+++|+.++. ....+..+.......|+||
T Consensus 74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--------~~~~~~~~~~~~~~~~s~d 145 (337)
T 1pby_B 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--------RRKAFEAPRQITMLAWARD 145 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--------EEEEEECCSSCCCEEECTT
T ss_pred cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--------EEEEEeCCCCcceeEECCC
Confidence 21100 011357899999998876421 00 23789999998731 0111111211111259999
Q ss_pred CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCe-----------------
Q psy2521 381 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVR----------------- 442 (783)
Q Consensus 381 g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~----------------- 442 (783)
|++|++. + ..|+.+|+.++. ....++... .... .+.+++..+++....++.
T Consensus 146 g~~l~~~-~-----~~i~~~d~~~~~---~~~~~~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 146 GSKLYGL-G-----RDLHVMDPEAGT---LVEDKPIQSWEAET--YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp SSCEEEE-S-----SSEEEEETTTTE---EEEEECSTTTTTTT--BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred CCEEEEe-C-----CeEEEEECCCCc---EeeeeeccccCCCc--eeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 9988876 2 359999987654 222333221 1111 123333334332222111
Q ss_pred ----eEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 ----SVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ----~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..|+++|+.+++.. .+... ...+.++.++++++.+++. + ..++.+|+
T Consensus 215 ~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~ 267 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDL 267 (337)
T ss_dssp GGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEET
T ss_pred cccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEEC
Confidence 16899999877753 44332 2234567788998888876 2 58999999
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=98.84 E-value=2.7e-06 Score=93.58 Aligned_cols=265 Identities=9% Similarity=0.039 Sum_probs=155.5
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEe
Q psy2521 184 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWT 263 (783)
Q Consensus 184 l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~Ws 263 (783)
+++-+..+++...++.... +...+..++|||||++||.+... ..|++||+++++.+...... ...-.+++
T Consensus 127 V~lWd~~tg~~~~~~~~~~----~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~h-~~~v~~~s 196 (420)
T 4gga_A 127 VYLWSASSGDILQLLQMEQ----PGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSH-SARVGSLS 196 (420)
T ss_dssp EEEEETTTCCEEEEEECCS----TTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCC-SSCEEEEE
T ss_pred EEEEECCCCCEEEEEEecC----CCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeCC-CCceEEEe
Confidence 3333444455444444221 22347889999999999876532 46999999999865432221 11233455
Q ss_pred eCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcE
Q psy2521 264 HDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSD 343 (783)
Q Consensus 264 pDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~ 343 (783)
+|++.|+-... ...++.++...... .+..+... ........++|+|++++....+ +.
T Consensus 197 ~~~~~l~sgs~----------------d~~i~~~d~~~~~~-~~~~~~~h--~~~~~~~~~~~~g~~l~s~~~D----~~ 253 (420)
T 4gga_A 197 WNSYILSSGSR----------------SGHIHHHDVRVAEH-HVATLSGH--SQEVCGLRWAPDGRHLASGGND----NL 253 (420)
T ss_dssp EETTEEEEEET----------------TSEEEEEETTSSSC-EEEEEECC--SSCEEEEEECTTSSEEEEEETT----SC
T ss_pred eCCCEEEEEeC----------------CCceeEeeecccce-eeEEeccc--ccceeeeeecCCCCeeeeeecc----cc
Confidence 57776654441 23577777665432 22223322 2234678999999998765432 57
Q ss_pred EEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCce
Q psy2521 344 LHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT 421 (783)
Q Consensus 344 l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~ 421 (783)
+.+++...+.... .... .......... .|+|++..++..... .....|..+|+.++. ....+... ..+
T Consensus 254 v~i~~~~~~~~~~----~~~~-~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~---~~~~~~~~-~~v 323 (420)
T 4gga_A 254 VNVWPSAPGEGGW----VPLQ-TFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGA---CLSAVDAH-SQV 323 (420)
T ss_dssp EEEEESSCCSSCS----CCSE-EECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTE---EEEEEECS-SCE
T ss_pred ceEEeeccccccc----eeee-eecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCccc---cceeeccc-cce
Confidence 8888887642110 1111 1122222222 488887777655332 223568888987765 22333333 345
Q ss_pred EEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 422 LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 422 l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
....+..+++.+++... .....|.+||+.+++.+..+....+.|..+.++|++..++ +.+. -.+|..||+
T Consensus 324 ~~~~~~~~~~~lv~~sg-~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s~---D~tvriWdv 393 (420)
T 4gga_A 324 CSILWSPHYKELISGHG-FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAA---DETLRLWRC 393 (420)
T ss_dssp EEEEEETTTTEEEEEEC-TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEET---TTEEEEECC
T ss_pred eeeeecCCCCeEEEEEe-cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEec---CCeEEEEEC
Confidence 55556666566665442 2235799999988998888877667788888899887654 3332 247888887
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.83 E-value=1.1e-06 Score=92.00 Aligned_cols=235 Identities=13% Similarity=0.083 Sum_probs=137.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
-.++.|+|+++.|.|+-.. + ..|+.+|.++++....... .....++|+|||+ |+... .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~-~---~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~dG~-l~v~~--~-------------- 72 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP-A---KKVCRWDSFTKQVQRVTMD-APVSSVALRQSGG-YVATI--G-------------- 72 (297)
T ss_dssp EEEEEEETTTTEEEEEETT-T---TEEEEEETTTCCEEEEECS-SCEEEEEEBTTSS-EEEEE--T--------------
T ss_pred ccCCeEECCCCEEEEEECC-C---CEEEEEECCCCcEEEEeCC-CceEEEEECCCCC-EEEEE--C--------------
Confidence 3479999988888776433 2 3699999998875432222 2236889999998 54443 1
Q ss_pred CceEEEEEcCCCCCCceeEEecCC-CC-eeEEEEEEecCCcEEEEEEecC-------CCCcEEEEEECCCCCCCcccCCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPN-GR-SLGLHSEVTDCGRYLLVSTSNN-------TQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~-~~-~~~~~~~~SpDGk~l~~~~~~~-------~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
..|++++..+... ..+..... .+ .....+.++|||+..+-..... .....||.++.++.
T Consensus 73 -~~l~~~d~~~g~~--~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~--------- 140 (297)
T 3g4e_A 73 -TKFCALNWKEQSA--VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH--------- 140 (297)
T ss_dssp -TEEEEEETTTTEE--EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---------
T ss_pred -CeEEEEECCCCcE--EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---------
Confidence 2578887765421 12222211 11 2245788999999443332211 12257888887541
Q ss_pred CceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCC--CCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEE
Q psy2521 362 PLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLN--NPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 362 ~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~--~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~ 437 (783)
...+......... .|+|||+.||+.... ..+|++++++ ++....-+.+..-. .......+.+..++.|++..
T Consensus 141 -~~~~~~~~~~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 141 -VKKYFDQVDISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp -EEEEEEEESBEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred -EEEEeeccccccceEEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 1222222211112 599999999886543 3468888763 33211111222111 11233455555446777766
Q ss_pred ecCCeeEEEEEECCCCceeeeecCCCeEEEeeecc-ccccEEEEEEecC
Q psy2521 438 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGR-RKYNEVFYGFTSF 485 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~-~d~~~l~~~~ss~ 485 (783)
..+ ..|.++|+++|+.+..+..|...+..+... ++.+.+|++-.+.
T Consensus 217 ~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 217 YNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred cCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 544 369999997799888888874445555555 7788899887654
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=98.83 E-value=7.7e-07 Score=106.65 Aligned_cols=225 Identities=8% Similarity=0.008 Sum_probs=138.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+.+... ..|++||+.+|+.+.... .......++|+|||+.|+....
T Consensus 57 ~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------------- 117 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD-------------- 117 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--------------
T ss_pred cEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC--------------
Confidence 37889999999999987542 479999999998654222 2223358999999998886552
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.++++.+.. .....+... ......+.|+| ||+.|+....+ ..|.++|+.++. ....+.
T Consensus 118 --dg~i~vw~~~~~~-~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~d----g~v~vwd~~~~~--------~~~~~~ 180 (814)
T 3mkq_A 118 --DLTVKLWNWENNW-ALEQTFEGH--EHFVMCVAFNPKDPSTFASGCLD----RTVKVWSLGQST--------PNFTLT 180 (814)
T ss_dssp --TSEEEEEEGGGTS-EEEEEEECC--SSCEEEEEEETTEEEEEEEEETT----SEEEEEETTCSS--------CSEEEE
T ss_pred --CCEEEEEECCCCc-eEEEEEcCC--CCcEEEEEEEcCCCCEEEEEeCC----CeEEEEECCCCc--------ceeEEe
Confidence 2367788876542 112233322 22456789999 77777654322 589999997631 122222
Q ss_pred cCccce--eEEEEe--eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 368 PGMDHH--HEIIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 368 ~~~~~~--~~~~s~--dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
...... ...|+| ++..|+..+. .+.|..+|+.++. ....+..+. .. +..+.+..++.++++...++
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~--~~~~~~~~~-~~-v~~~~~~~~~~~l~~~~~dg-- 250 (814)
T 3mkq_A 181 TGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKS--CVATLEGHM-SN-VSFAVFHPTLPIIISGSEDG-- 250 (814)
T ss_dssp CCCTTCCCEEEECCSTTCCEEEEECT----TSEEEEEETTTTE--EEEEEECCS-SC-EEEEEECSSSSEEEEEETTS--
T ss_pred cCCCCCEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCCc--EEEEEcCCC-CC-EEEEEEcCCCCEEEEEeCCC--
Confidence 222122 225777 7776665432 3468888887654 122332232 33 33443333355666666554
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEEEE
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFY 480 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~ 480 (783)
.|.+||+.+++.+..+..+...+..+.+++++..+++
T Consensus 251 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 251 TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYI 287 (814)
T ss_dssp CEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEE
T ss_pred eEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEE
Confidence 5889999888877777766556667777777765433
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-06 Score=95.09 Aligned_cols=236 Identities=10% Similarity=0.058 Sum_probs=142.1
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..+.|||||++|+-+.. + ..|++||+.+|+...... .......++|+|||+.|+-...+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~-D----g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D------------ 171 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASE-D----ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD------------ 171 (410)
T ss_dssp SCEEEEEECSSSSEEEEEES-S----SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT------------
T ss_pred CcEEEEEEcCCCCEEEEEeC-C----CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC------------
Confidence 34778999999998876543 2 469999999997654221 11223578999999977655522
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..|.++++.+.. .+.....+......+.|+|||++|+.... ...|.++|+.++. .... +
T Consensus 172 ----~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~~l~s~s~----D~~i~~wd~~~~~--------~~~~-~ 230 (410)
T 1vyh_C 172 ----MTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGDHIVSASR----DKTIKMWEVQTGY--------CVKT-F 230 (410)
T ss_dssp ----SCCCEEETTSSC----EEECCCCCSSCEEEEEECSSSSEEEEEET----TSEEEEEETTTCC--------EEEE-E
T ss_pred ----CeEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCc--------EEEE-E
Confidence 245666775432 22222222234568899999999874432 2689999998741 1112 2
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC---------------
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN--------------- 430 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g--------------- 430 (783)
.+...... .++++|..|+..+.. +.|..+|+.++. ....+... ...+..+.+..+
T Consensus 231 ~~h~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~---~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 231 TGHREWVRMVRPNQDGTLIASCSND----QTVRVWVVATKE---CKAELREH-RHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC---EEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred eCCCccEEEEEECCCCCEEEEEcCC----CeEEEEECCCCc---eeeEecCC-CceEEEEEEcCcccccchhhhcccccc
Confidence 22222222 477888766654432 347777876644 22222222 223333333221
Q ss_pred -----CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 -----NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 -----~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.++++...++ .|.+||+.+|+.+..+....+.|..+.+++++..++ +.+. -..+..+|+
T Consensus 303 ~~~~~g~~l~sgs~D~--~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~-s~s~---D~~i~vwd~ 367 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCAD---DKTLRVWDY 367 (410)
T ss_dssp -----CCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE-EEET---TTEEEEECC
T ss_pred ccCCCCCEEEEEeCCC--eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE-EEeC---CCeEEEEEC
Confidence 34566666664 689999988887777765555677777788876655 3222 357889998
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.6e-06 Score=94.49 Aligned_cols=235 Identities=10% Similarity=0.076 Sum_probs=130.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-------------------ccccCeeEEeeCCCEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-------------------NVKFPSISWTHDHKGFFY 271 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-------------------~~~~~~~~WspDg~~l~y 271 (783)
+..++|||||++||.+.+ ..+.++++.+|+.+..... ......++|+|||+.|+.
T Consensus 67 V~~v~fspdg~~la~g~~------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 67 VCCVKFSNDGEYLATGCN------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp CCEEEECTTSSEEEEECB------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEcC------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 567899999999997542 3588999998875421110 001247899999998876
Q ss_pred EEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 272 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 272 ~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
... ...|.++++.+.. .+..+... ......+.|+|||++|+.... ...|.++|+.+
T Consensus 141 ~~~----------------d~~i~iwd~~~~~--~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~----d~~v~iwd~~~ 196 (393)
T 1erj_A 141 GAE----------------DRLIRIWDIENRK--IVMILQGH--EQDIYSLDYFPSGDKLVSGSG----DRTVRIWDLRT 196 (393)
T ss_dssp EET----------------TSCEEEEETTTTE--EEEEECCC--SSCEEEEEECTTSSEEEEEET----TSEEEEEETTT
T ss_pred EcC----------------CCeEEEEECCCCc--EEEEEccC--CCCEEEEEEcCCCCEEEEecC----CCcEEEEECCC
Confidence 652 2357888886542 22233322 223568899999999875432 26799999987
Q ss_pred CCCCcccCCCCceeeecCccceeE-EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec-----CCCCceEEE
Q psy2521 352 LPDGKISGKFPLKTVIPGMDHHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-----EDENRTLDV 424 (783)
Q Consensus 352 g~~~~l~~~~~~~~l~~~~~~~~~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~-----~~~~~~l~~ 424 (783)
+. ............. .|+| +|+.|+..+. .+.|..+|+.++.. ...+.. ......+..
T Consensus 197 ~~---------~~~~~~~~~~v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 197 GQ---------CSLTLSIEDGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGFL--VERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp TE---------EEEEEECSSCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCCE--EEEEC------CCCSSCEEE
T ss_pred Ce---------eEEEEEcCCCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCCcE--EEeecccccCCCCCCCCEEE
Confidence 41 1111111121222 4777 6666655433 23477788766431 122211 111223444
Q ss_pred EEEeeCCEEEEEEecCCeeEEEEEECCCCcee------------eeecCCCeEEEeeeccccccEEEEEEecCCCCceEE
Q psy2521 425 VAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL------------HSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIY 492 (783)
Q Consensus 425 ~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~------------~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy 492 (783)
+.+..++.++++...++ .|.+||+.+++.. ..+......+..+..++++..++ +.+. -..++
T Consensus 262 v~~~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~---D~~v~ 335 (393)
T 1erj_A 262 VVFTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSK---DRGVL 335 (393)
T ss_dssp EEECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEET---TSEEE
T ss_pred EEECCCCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeC---CCeEE
Confidence 54444356666666664 6888888543321 11222223355566667665444 3222 24788
Q ss_pred EEeC
Q psy2521 493 HCNI 496 (783)
Q Consensus 493 ~~d~ 496 (783)
.+|+
T Consensus 336 iwd~ 339 (393)
T 1erj_A 336 FWDK 339 (393)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8998
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.83 E-value=5.8e-07 Score=103.01 Aligned_cols=218 Identities=11% Similarity=0.079 Sum_probs=132.2
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..+++||||++|+..... ..|+++|..+...............++|+|||+.|+....
T Consensus 346 ~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~--------------- 405 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD--------------- 405 (577)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEET---------------
T ss_pred CEEEEEECCCCCEEEEEeCC-----CEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeC---------------
Confidence 36678999999999876532 4689999654322222222222357899999998876652
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...|.+++... +....+... ......+.+|||+++|+.... ...|.++|+.+. ....+. +
T Consensus 406 -d~~v~~~~~~~---~~~~~~~~~--~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~---------~~~~~~-~ 465 (577)
T 2ymu_A 406 -DKTVKLWNRNG---QLLQTLTGH--SSSVWGVAFSPDDQTIASASD----DKTVKLWNRNGQ---------LLQTLT-G 465 (577)
T ss_dssp -TSEEEEECTTC---CEEEEEECC--SSCEEEEEECTTSSEEEEEET----TSEEEEEETTSC---------EEEEEE-C
T ss_pred -CCEEEEEeCCC---CEEEEecCC--CCCeEEEEECCCCCEEEEEcC----CCEEEEEECCCC---------EEEEEc-C
Confidence 22566666432 211222222 223457899999999886533 257888897651 012222 2
Q ss_pred ccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
...... .|+|||+.|+..+. ...|..++.++.. .+.+..+. .. +..+.+..++.++++...++ .|++
T Consensus 466 ~~~~v~~~~~spd~~~las~~~----d~~i~iw~~~~~~---~~~~~~h~-~~-v~~l~~s~dg~~l~s~~~dg--~v~l 534 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASD----DKTVKLWNRNGQL---LQTLTGHS-SS-VRGVAFSPDGQTIASASDDK--TVKL 534 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEET----TSEEEEEETTSCE---EEEEECCS-SC-EEEEEECTTSSCEEEEETTS--EEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeC----CCEEEEEcCCCCE---EEEEeCCC-CC-EEEEEEcCCCCEEEEEECcC--EEEE
Confidence 222222 58999988775443 2457777865422 34444333 33 33444433355566666665 6889
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
||. +|+.+..+....+.|..+.+++|++.++
T Consensus 535 wd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 535 WNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp ECT-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 998 7887777776666777888888887654
|
| >1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=7e-09 Score=109.82 Aligned_cols=122 Identities=9% Similarity=-0.053 Sum_probs=85.0
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcC
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~ 614 (783)
++.++...++.|+++. .+..+.||++||..+.... .|...+...|.++||.|+.+|+||.|.-. . ..
T Consensus 12 ~~~~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~---~--------~~ 78 (317)
T 1tca_A 12 PKSVLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLND---T--------QV 78 (317)
T ss_dssp CHHHHHHTEEETTBCT-TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSC---H--------HH
T ss_pred CHHHHhheeeCCCCCC-CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCc---H--------HH
Confidence 3445556677777653 3445678999998766532 13312446677679999999999943211 1 12
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEEcCCcch
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALD 671 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~~~~~~d 671 (783)
..+++.+.+++++++. ..+++.++|||+||+++..++.++| +.++++|+.+|..+
T Consensus 79 ~~~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 79 NTEYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 3467888888887652 3368999999999999998887765 78899999887543
|
| >1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A | Back alignment and structure |
|---|
Probab=98.82 E-value=4.2e-09 Score=116.47 Aligned_cols=114 Identities=13% Similarity=0.032 Sum_probs=80.0
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|+||++||..+.. ...|.... ..++...||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~--~~~~~--~~~~~~~~dl~~~i~~l~~~~ 141 (432)
T 1gpl_A 67 NLNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQ--YSQAS--QNIRVVGAEVAYLVQVLSTSL 141 (432)
T ss_dssp CTTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCcc--chhhH--hhHHHHHHHHHHHHHHHHHhc
Confidence 34579999999986654 22344423 33443359999999999955433 11111 111233468888888887553
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.++.+++.++|||+||.+++.++.++|+.+++++...|..
T Consensus 142 g~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 142 NYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 3567899999999999999999999999888888877654
|
| >3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.3e-08 Score=104.19 Aligned_cols=139 Identities=15% Similarity=0.122 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-----ceeEEEEcCCcchhhhcccccccccchhhhCC
Q psy2521 616 FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-----LYGAALILVGALDMLRFNKFTIAYYSESEFGS 690 (783)
Q Consensus 616 ~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-----lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~ 690 (783)
.+|+.++++.|.++.. -+++.++||||||+++..++.++|+ ..+++|+.++..+....... ...+ ..-|.
T Consensus 77 a~~l~~~i~~l~~~~~--~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~-~~~~~ 151 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRYG--FTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDN--GMDL-SFKKL 151 (254)
T ss_dssp HHHHHHHHHHHHHHHC--CSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHH--CSCT-TCSSC
T ss_pred HHHHHHHHHHHHHHhC--CCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCccccccc--cccc-ccccC
Confidence 4556566677776522 2689999999999999999999998 78999988886654322110 0011 11133
Q ss_pred CCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecC------CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 691 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD------HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 691 p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
|.....+..+... ...+.. ..| +|+++|+ +|..||+..+..+...+... ...+...++.
T Consensus 152 p~~~~~~~~~~~~--~~~~~~-----~~~-vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~-------~~~~~~~~~~ 216 (254)
T 3ds8_A 152 PNSTPQMDYFIKN--QTEVSP-----DLE-VLAIAGELSEDNPTDGIVPTISSLATRLFMPGS-------AKAYIEDIQV 216 (254)
T ss_dssp SSCCHHHHHHHHT--GGGSCT-----TCE-EEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTT-------BSEEEEEEEE
T ss_pred CcchHHHHHHHHH--HhhCCC-----CcE-EEEEEecCCCCCCCCcEeeHHHHHHHHHHhhcc-------CcceEEEEEe
Confidence 4332233322211 111211 334 9999999 99999999888776666543 3345555555
Q ss_pred C--CCccCCccc
Q psy2521 765 D--AGHGQGKAL 774 (783)
Q Consensus 765 ~--~gHg~~~~~ 774 (783)
+ ++|......
T Consensus 217 g~~a~Hs~l~~~ 228 (254)
T 3ds8_A 217 GEDAVHQTLHET 228 (254)
T ss_dssp SGGGCGGGGGGS
T ss_pred CCCCchhcccCC
Confidence 5 779865443
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=98.80 E-value=5.2e-06 Score=89.28 Aligned_cols=286 Identities=16% Similarity=0.166 Sum_probs=149.8
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEec-----CCCce
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDW 234 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~-----~G~d~ 234 (783)
...|.++|.++|..-.........+++.+..+.+..--+.. |.. - .+.+||||++|..+... .|.+.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v------G~~-P-~va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------GFL-P-NPVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------CSS-C-EEEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC------CCC-C-cEEECCCCCEEEEEcccccccccCCCC
Confidence 35677889988776432111124666666433221111110 111 1 38999999988765431 23234
Q ss_pred EEEEEEECCCCcccccc-cc-------ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc
Q psy2521 235 NTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD 306 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d 306 (783)
..|.++|++|++.+... +. +.....+.++|||+++|.+... ....|..+++.+.....
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--------------~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--------------PAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--------------SSCEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--------------CCCeEEEEECCCCcEEE
Confidence 67999999999865432 21 1133578999999998876521 12357777776543211
Q ss_pred eeEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEE-ee
Q psy2521 307 IPVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIA-NN 380 (783)
Q Consensus 307 ~~v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s-~d 380 (783)
. ...+..... ...+..++||+.+++..... +.+ .+..+. .+ +.....++. ...|. ++
T Consensus 175 t--I~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~---g~v--~~~~~~---~~--~~~~~~~~~-----~~~~~~~d 237 (386)
T 3sjl_D 175 M--LDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE---GTP--EITHTE---VF--HPEDEFLIN-----HPAYSQKA 237 (386)
T ss_dssp E--EECCSEEEEEEEETTEEEEEETTSCEEEEECCSS---SCC--EEEECC---CC--SCTTSCBCS-----CCEEETTT
T ss_pred E--EECCCcceeecCCCceeEEECCCCCEEEEECCCC---CeE--EEeecc---ee--ccccccccc-----cceeEcCC
Confidence 1 111110000 01136788888776654321 122 111110 00 000000110 01344 45
Q ss_pred CCEEEEEECCCCCCceEEEEcCCCCCC---CCcEEee----------cCCCCceEEEEEEeeCCEEEEEEecC-------
Q psy2521 381 GPELIVKTTKNAPKGKVVTINLNNPCE---KNWKTLI----------PEDENRTLDVVAAVANNKLIVHYIQN------- 440 (783)
Q Consensus 381 g~~l~~~t~~~~~~~~L~~~d~~~~~~---~~~~~li----------~~~~~~~l~~~~~~~g~~l~~~~~~~------- 440 (783)
| +++|.+.. ++++.+|+.+... ..|. ++ |.+ ...+ .+ ..+++++|+....+
T Consensus 238 G-~~~~vs~~----g~V~v~d~~~~~~~v~~~~~-~~~~~~~~~g~~p~g-~q~~-a~-~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 238 G-RLVWPTYT----GKIHQIDLSSGDAKFLPAVE-ALTEAERADGWRPGG-WQQV-AY-HRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp T-EEEEEBTT----SEEEEEECTTSSCEECCCEE-SSCHHHHHTTEEECS-SSCE-EE-ETTTTEEEEEEEECCTTCTTS
T ss_pred C-cEEEEeCC----CEEEEEECCCCcceeeccee-ccccccccccccCCC-ccee-eE-CCCCCeEEEEeccccccccCC
Confidence 5 56666652 4699999876431 1111 11 111 1111 12 23457888876532
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
...+|+++|+++++.++.|+++. .+.++..++|++..+|..+. .-.++..+|.
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~--~~~~VsViD~ 361 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALST--GDKTLYIHDA 361 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEET--TTTEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcC--CCCeEEEEEC
Confidence 34789999999999888888753 23356677888644444332 2357999999
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.80 E-value=7e-07 Score=95.72 Aligned_cols=242 Identities=10% Similarity=0.006 Sum_probs=138.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc--ccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~--~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+..++|||||++|+.+.. ...|++||+++++ .+. ..........++|+||++.|+....+
T Consensus 11 i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------------ 73 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------------ 73 (372)
T ss_dssp CCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------------
T ss_pred eEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------------
Confidence 677899999999987633 2579999999885 322 11222234689999999988766621
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..|.++++.+... ...............+.|+|||++|+..... ..|.++|+..+... .....+.
T Consensus 74 ----g~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~i~d~~~~~~~-----~~~~~~~ 138 (372)
T 1k8k_C 74 ----RNAYVWTLKGRTW--KPTLVILRINRAARCVRWAPNEKKFAVGSGS----RVISICYFEQENDW-----WVCKHIK 138 (372)
T ss_dssp ----SCEEEEEEETTEE--EEEEECCCCSSCEEEEEECTTSSEEEEEETT----SSEEEEEEETTTTE-----EEEEEEC
T ss_pred ----CeEEEEECCCCee--eeeEEeecCCCceeEEEECCCCCEEEEEeCC----CEEEEEEecCCCcc-----eeeeeee
Confidence 2577777754421 1122211222235678999999998865432 46777777662100 0011121
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCC---------------CCCcEEeecCCCCceEEEEEEeeC
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPC---------------EKNWKTLIPEDENRTLDVVAAVAN 430 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~---------------~~~~~~li~~~~~~~l~~~~~~~g 430 (783)
.+...... .|+|+++.|+..+.. +.|..+|+.... .......+... ...+..+.+..+
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~ 213 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-CGWVHGVCFSAN 213 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-SSCEEEEEECSS
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCC----CCEEEEEcccccccccccccccccccchhhheEecCCC-CCeEEEEEECCC
Confidence 22222222 588988877765432 357777753110 00112222222 223444444333
Q ss_pred CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+++....++ .|.+||+.+++.+..+......+..+.+++++..++.. .-..++.||+
T Consensus 214 ~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~d~~i~i~~~ 272 (372)
T 1k8k_C 214 GSRVAWVSHDS--TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-----HDCFPVLFTY 272 (372)
T ss_dssp SSEEEEEETTT--EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-----TTSSCEEEEE
T ss_pred CCEEEEEeCCC--EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-----eCCeEEEEEc
Confidence 55555555554 68999998888777777665567777777877544332 1245667776
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-07 Score=103.22 Aligned_cols=250 Identities=9% Similarity=0.056 Sum_probs=141.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC---Cc-ccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT---GK-DYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t---g~-~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
..+..++|||||++|+.+... ..|++||+.+ +. .+. ..........++|+||+..++++...
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-------- 134 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-------- 134 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS--------
T ss_pred CceEEEEECCCCCeEEEEccC-----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC--------
Confidence 347889999999999876542 3599999987 22 221 11122234689999994344444421
Q ss_pred CcccccCCceEEEEEcCCCCC-----CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~-----~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|+++++.+... ....+............+.|+||+..+++.... ...|.++|+.++.
T Consensus 135 -------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~v~iwd~~~~~----- 199 (416)
T 2pm9_A 135 -------NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS---SNFASIWDLKAKK----- 199 (416)
T ss_dssp -------SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS---SSCEEEEETTTTE-----
T ss_pred -------CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC---CCCEEEEECCCCC-----
Confidence 23577888876531 111110001112234578999995444444322 3579999998731
Q ss_pred CCCCceeeecCc-----ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee-C
Q psy2521 359 GKFPLKTVIPGM-----DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-N 430 (783)
Q Consensus 359 ~~~~~~~l~~~~-----~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~-g 430 (783)
....+.... .... . .|+|++..+++....++....|..+|+.++.. ....+.... ...+..+.+.. +
T Consensus 200 ---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~-~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 200 ---EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQTLNQGH-QKGILSLDWCHQD 274 (416)
T ss_dssp ---EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBCCCSCC-SSCEEEEEECSSC
T ss_pred ---cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEEeecCc-cCceeEEEeCCCC
Confidence 011111110 1222 2 58999866655555443333678888876421 122222022 22334444432 3
Q ss_pred CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.++++...++ .|.+||+.+++.+..+....+.+..+.+++++..++++.+. -..+..||+
T Consensus 275 ~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~---d~~i~iw~~ 335 (416)
T 2pm9_A 275 EHLLLSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF---DNKIEVQTL 335 (416)
T ss_dssp SSCEEEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS---SSEEEEEES
T ss_pred CCeEEEEeCCC--CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec---CCcEEEEEc
Confidence 56666666664 68999998888877776655556677788887445544433 357888998
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.79 E-value=4e-06 Score=88.68 Aligned_cols=236 Identities=9% Similarity=0.038 Sum_probs=138.6
Q ss_pred EEeeEEECCC----CcEEEEEEecCCCceEEEEEEECCCCcccc-cccc--ccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 210 ALKLYAFSDN----GKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLK--NVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 210 ~l~~~~~SPD----G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
.+..++|||+ +++|+-+. .+ .+|+|||+.+++... .++. ......+.|+|+++.++-...
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs-~D----~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~-------- 100 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGS-LD----DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL-------- 100 (321)
T ss_dssp CEEEEEEC-------CEEEEEE-TT----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET--------
T ss_pred cEEEEEEecCCCCCCCEEEEEc-CC----CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC--------
Confidence 4778889986 45555433 22 458899987765321 1222 122357899999986664442
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
...|.++++.+.. ....+.... .....+.|+|||++|+... ....+.++++.++. .
T Consensus 101 --------D~~i~lWd~~~~~--~~~~~~~~~--~~~~~~~~spdg~~l~~g~----~dg~v~i~~~~~~~--------~ 156 (321)
T 3ow8_A 101 --------DAHIRLWDLENGK--QIKSIDAGP--VDAWTLAFSPDSQYLATGT----HVGKVNIFGVESGK--------K 156 (321)
T ss_dssp --------TSEEEEEETTTTE--EEEEEECCT--TCCCCEEECTTSSEEEEEC----TTSEEEEEETTTCS--------E
T ss_pred --------CCcEEEEECCCCC--EEEEEeCCC--ccEEEEEECCCCCEEEEEc----CCCcEEEEEcCCCc--------e
Confidence 2368888887642 222222221 1224688999999988543 23689999998731 1
Q ss_pred ceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 363 LKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 363 ~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
...+......... .|+|+|+.|+..+.. +.|..+|+.++. ....+... ...+..+.+..++.++++...++
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~d----g~i~iwd~~~~~---~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg 228 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAID----GIINIFDIATGK---LLHTLEGH-AMPIRSLTFSPDSQLLVTASDDG 228 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---EEEEECCC-SSCCCEEEECTTSCEEEEECTTS
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCC----CeEEEEECCCCc---EEEEEccc-CCceeEEEEcCCCCEEEEEcCCC
Confidence 1112111111122 599999988765443 458888987654 22223222 22333444443356666666664
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+||+.+++....+....+.|..+.++|++..++ +.+. -.++..+|+
T Consensus 229 --~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~---D~~v~iwd~ 277 (321)
T 3ow8_A 229 --YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV-SSSS---DKSVKVWDV 277 (321)
T ss_dssp --CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE-EEET---TSCEEEEET
T ss_pred --eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE-EEeC---CCcEEEEeC
Confidence 588999987877677766556677888888887654 3322 247889998
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.79 E-value=5.2e-07 Score=97.38 Aligned_cols=259 Identities=10% Similarity=-0.030 Sum_probs=126.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECC-CCcccccc-cc-ccccCeeEEeeCCCEEE-EEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDYPEV-LK-NVKFPSISWTHDHKGFF-YNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~-tg~~~~~~-~~-~~~~~~~~WspDg~~l~-y~~~~~~~~~~~g~~~ 286 (783)
...++|||||++|+. .+.+ .|.++|++ +|+.+... .. ......++|+|||+.++ |+.... ...
T Consensus 42 ~~~~a~spdg~~l~~-~~~~-----~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~-------~~~ 108 (365)
T 1jof_A 42 ISWMTFDHERKNIYG-AAMK-----KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQP-------PYA 108 (365)
T ss_dssp CSEEEECTTSSEEEE-EEBT-----EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSST-------TCC
T ss_pred CcEEEECCCCCEEEE-Eccc-----eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCC-------cce
Confidence 456899999998754 4332 68899987 77654321 11 11134689999999744 444100 000
Q ss_pred c-cc----CCceEEEEEcCCCCCCcee--EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC-CCCCCccc
Q psy2521 287 T-AH----MGQKIYYHVLGTEQDKDIP--VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-SLPDGKIS 358 (783)
Q Consensus 287 ~-~~----~~~~v~~~~lgt~~~~d~~--v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~-~g~~~~l~ 358 (783)
. .+ ....+.++++......... ++.... .....++.|||||++|++. ..+ ...|++++++ +|. +.
T Consensus 109 ~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~spdG~~l~~~-~~~--~~~v~~~~~~~~g~---~~ 181 (365)
T 1jof_A 109 VYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQE-NTGIHGMVFDPTETYLYSA-DLT--ANKLWTHRKLASGE---VE 181 (365)
T ss_dssp EEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCT-TCCEEEEEECTTSSEEEEE-ETT--TTEEEEEEECTTSC---EE
T ss_pred eccceeecCCceEEEEccCCCCcCcceEeeEEeCC-CCcceEEEECCCCCEEEEE-cCC--CCEEEEEEECCCCC---EE
Confidence 0 00 2335666666532211111 111111 1234678999999998654 322 3689999987 531 10
Q ss_pred CCCCceeee--c-CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCC-cEE--eecCC-CC-c-------eEE
Q psy2521 359 GKFPLKTVI--P-GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN-WKT--LIPED-EN-R-------TLD 423 (783)
Q Consensus 359 ~~~~~~~l~--~-~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~-~~~--li~~~-~~-~-------~l~ 423 (783)
....+. . +.....-.|+|||+++|+....+ ..-.++.++.+++.... .+. .++.. .. . ...
T Consensus 182 ---~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 257 (365)
T 1jof_A 182 ---LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRA 257 (365)
T ss_dssp ---EEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEE
T ss_pred ---EeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccc
Confidence 011111 0 11111125999999988765432 23345555554433100 011 22221 01 1 233
Q ss_pred EE--EEeeCCEEEEEEecCC---eeEEEEEECC-CCceee---eecCCCeEEEeeeccc---cccEEEEEEecCCCCceE
Q psy2521 424 VV--AAVANNKLIVHYIQNV---RSVMDLHDLN-TGKRLH---SFPLDLGQITHISGRR---KYNEVFYGFTSFLQPGTI 491 (783)
Q Consensus 424 ~~--~~~~g~~l~~~~~~~g---~~~l~~~dl~-~G~~~~---~l~~~~g~v~~~s~~~---d~~~l~~~~ss~~~P~~v 491 (783)
.+ +.++|+.|++...... ...|.+|+++ +|+... .+........++..+| +++.+++.... -.++
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~---~~~v 334 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ---EGWL 334 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS---SCEE
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC---CCeE
Confidence 33 4455556765554332 1268888874 566432 1221111122344567 67776654321 1355
Q ss_pred EEEeC
Q psy2521 492 YHCNI 496 (783)
Q Consensus 492 y~~d~ 496 (783)
..+++
T Consensus 335 ~v~~~ 339 (365)
T 1jof_A 335 EIYRW 339 (365)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55555
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=98.77 E-value=2e-06 Score=98.53 Aligned_cols=231 Identities=11% Similarity=0.070 Sum_probs=142.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..+++||||++|+..... ..|++||+.+...............++|+|||+.|+....
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d-----~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--------------- 364 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASD--------------- 364 (577)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEET---------------
T ss_pred CeEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeC---------------
Confidence 46678999999999866432 3589999877654433322223357899999998886662
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+.+++... +....+... ......+.+||||++|+.... ...|.++|..+. ....+. +
T Consensus 365 -dg~v~~~~~~~---~~~~~~~~~--~~~v~~~~~s~dg~~l~~~~~----d~~v~~~~~~~~---------~~~~~~-~ 424 (577)
T 2ymu_A 365 -DKTVKLWNRNG---QLLQTLTGH--SSSVRGVAFSPDGQTIASASD----DKTVKLWNRNGQ---------LLQTLT-G 424 (577)
T ss_dssp -TSEEEEEETTC---CEEEEEECC--SSCEEEEEECTTSSCEEEEET----TSEEEEECTTCC---------EEEEEE-C
T ss_pred -CCEEEEEcCCC---CEEEEecCC--CCCeEEEEECCCCCEEEEEeC----CCEEEEEeCCCC---------EEEEec-C
Confidence 12466666432 212222222 223467899999999886432 257888886541 012222 2
Q ss_pred cccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 370 MDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 370 ~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
..... . .|+||++.|+..+. +..|..+++.+.. ...+..+. .. +..+.+..++.++++...++ .|.+
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~~---~~~~~~~~-~~-v~~~~~spd~~~las~~~d~--~i~i 493 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASD----DKTVKLWNRNGQL---LQTLTGHS-SS-VRGVAFSPDGQTIASASDDK--TVKL 493 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEET----TSEEEEEETTSCE---EEEEECCS-SC-EEEEEECTTSCEEEEEETTS--EEEE
T ss_pred CCCCeEEEEECCCCCEEEEEcC----CCEEEEEECCCCE---EEEEcCCC-CC-EEEEEEcCCCCEEEEEeCCC--EEEE
Confidence 22222 2 58999988776543 2457777865432 34444443 33 34444443366666666664 6888
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
||. +|+.++.+....+.|..+.++|++..++. .+. -..+..||.
T Consensus 494 w~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s-~~~---dg~v~lwd~ 537 (577)
T 2ymu_A 494 WNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIAS-ASD---DKTVKLWNR 537 (577)
T ss_dssp EET-TSCEEEEEECCSSCEEEEEECTTSSCEEE-EET---TSEEEEECT
T ss_pred EcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEE-EEC---cCEEEEEeC
Confidence 997 78887888766667778888898876653 222 247888887
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.77 E-value=2.2e-06 Score=93.31 Aligned_cols=234 Identities=12% Similarity=0.129 Sum_probs=140.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+.+... ..|++||. +++.+. ..........+.|+||++.|+....+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d-----g~i~i~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------- 170 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN-----GELRLWNK-TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE------------- 170 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEET-TSCEEEEECCCCSCEEEEEECTTSSEEEEEETT-------------
T ss_pred ceEEEEEcCCCCEEEEEeCC-----CeEEEEeC-CCCeeeeccCCCccEEEEEECCCCCEEEEEecC-------------
Confidence 58889999999999876542 35899994 444332 22222234689999999988866622
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCC-------------eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGR-------------SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~-------------~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~ 355 (783)
..|.++++.+.. ....+...... .....+.|+|++..++ .. ....|+++|+.++.
T Consensus 171 ---~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~g~i~~~d~~~~~-- 238 (425)
T 1r5m_A 171 ---NVTILWNVISGT--VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVI-PG----PKGAIFVYQITEKT-- 238 (425)
T ss_dssp ---CCEEEEETTTTE--EEEEECCC---------------CCCBSCCEEEETTEEEE-EC----GGGCEEEEETTCSS--
T ss_pred ---CeEEEEECCCCc--EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEE-Ec----CCCeEEEEEcCCCc--
Confidence 246777775432 11222211111 0034678899876433 21 23689999998731
Q ss_pred cccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEE
Q psy2521 356 KISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKL 433 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l 433 (783)
....+ ....... . .|+++++.|+..+. .+.|..+|+..+.. ...+..+. .. +..+.+..++ +
T Consensus 239 ------~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~--~~~~~~~~-~~-i~~~~~~~~~-~ 302 (425)
T 1r5m_A 239 ------PTGKL-IGHHGPISVLEFNDTNKLLLSASD----DGTLRIWHGGNGNS--QNCFYGHS-QS-IVSASWVGDD-K 302 (425)
T ss_dssp ------CSEEE-CCCSSCEEEEEEETTTTEEEEEET----TSCEEEECSSSBSC--SEEECCCS-SC-EEEEEEETTT-E
T ss_pred ------eeeee-ccCCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCCcc--ceEecCCC-cc-EEEEEECCCC-E
Confidence 11222 2222222 2 58999887776543 24588889876541 23333232 33 3444444435 5
Q ss_pred EEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 434 IVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 434 ~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++....++ .|.+||+.+++.+..+....+.+..+.+++++..++.... -..+..||+
T Consensus 303 l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~~~ 359 (425)
T 1r5m_A 303 VISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFM----DGQVNVYDL 359 (425)
T ss_dssp EEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEET----TSCEEEEEC
T ss_pred EEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEEC----CCeEEEEEC
Confidence 55565554 7899999888877777665556777888888876664432 247888988
|
| >1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.5e-08 Score=116.15 Aligned_cols=117 Identities=20% Similarity=0.219 Sum_probs=79.8
Q ss_pred CCCccEEEEecCCCCCc---cCCcCcHHHHHHHHcCCEEEEEecCCCC-CCCCh---hHHh-hccccCCcChHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVS---VLPTFSISRCMFLRHFNGIYAIPNIRGG-GELGE---DWHN-AGRLLKKQNCFDDFQAAA 623 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~---~~~~-~g~~~~~~~~~~D~~a~~ 623 (783)
.++.|+||++|||.... ..+.|... .+.++.|++|+.+|||-| -+|.. .+.. ......+...+.|+++|+
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~--~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNAD--IMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCH--HHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCch--hhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 46789999999985332 22334432 334446999999999942 11211 0000 011122334589999999
Q ss_pred HHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 624 EYMINKK---YTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 624 ~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
+|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+.+|..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9998862 35999999999999999998888652 35999999998864
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.3e-06 Score=89.65 Aligned_cols=256 Identities=11% Similarity=0.058 Sum_probs=146.1
Q ss_pred CeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEE
Q psy2521 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYN 272 (783)
Q Consensus 193 ~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~ 272 (783)
..++|++... .-..++.|+||++.+.|+-..+ ..|+++|.++++........ ....+.|+|||+. ++.
T Consensus 39 ~~~~~~~~~~------~~~egp~~~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~-~v~~i~~~~dg~l-~v~ 106 (326)
T 2ghs_A 39 AGRVLDETPM------LLGEGPTFDPASGTAWWFNILE----RELHELHLASGRKTVHALPF-MGSALAKISDSKQ-LIA 106 (326)
T ss_dssp CCEEEECSCC------SBEEEEEEETTTTEEEEEEGGG----TEEEEEETTTTEEEEEECSS-CEEEEEEEETTEE-EEE
T ss_pred ceEEeeccCC------CCCcCCeEeCCCCEEEEEECCC----CEEEEEECCCCcEEEEECCC-cceEEEEeCCCeE-EEE
Confidence 3466666321 1135689999988887764432 36999999988754332222 2367899999874 444
Q ss_pred EeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC-C-CeeEEEEEEecCCcEEEEEEecC--CCCcEEEEEE
Q psy2521 273 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN-G-RSLGLHSEVTDCGRYLLVSTSNN--TQGSDLHYFD 348 (783)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~-~-~~~~~~~~~SpDGk~l~~~~~~~--~~~~~l~~~d 348 (783)
. . ..|++++..+... ..+...+. . ......+.++|||+..+-..... .....||.++
T Consensus 107 ~--~---------------~gl~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 107 S--D---------------DGLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp E--T---------------TEEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred E--C---------------CCEEEEECCCCcE--EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 3 1 1478887755431 22222211 1 12345788999999544222211 1236899998
Q ss_pred CCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCC--CC-CCCCcEEeecC-CCCceEE
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLN--NP-CEKNWKTLIPE-DENRTLD 423 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~--~~-~~~~~~~li~~-~~~~~l~ 423 (783)
++ . ...+..+..... ..|++||+.||+.... ...|++++++ ++ .....+.+..- .......
T Consensus 168 -~g-~---------~~~~~~~~~~~~~i~~s~dg~~lyv~~~~---~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~ 233 (326)
T 2ghs_A 168 -KG-K---------VTKLFADISIPNSICFSPDGTTGYFVDTK---VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMD 233 (326)
T ss_dssp -TT-E---------EEEEEEEESSEEEEEECTTSCEEEEEETT---TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEE
T ss_pred -CC-c---------EEEeeCCCcccCCeEEcCCCCEEEEEECC---CCEEEEEEcccccCCcccCceEEEECCCCCCCCC
Confidence 43 1 122222111111 2589999999886543 3579999875 43 22111222211 1122334
Q ss_pred EEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeecc-ccccEEEEEEecCCC----------CceEE
Q psy2521 424 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGR-RKYNEVFYGFTSFLQ----------PGTIY 492 (783)
Q Consensus 424 ~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~-~d~~~l~~~~ss~~~----------P~~vy 492 (783)
.+.+..++.|++....+ ..|+++++ +|+.+..+..+...+.++... ++++.++++...... .+.+|
T Consensus 234 gi~~d~~G~lwva~~~~--~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~~~~~~~~~~p~~g~~~ 310 (326)
T 2ghs_A 234 GSVCDAEGHIWNARWGE--GAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTF 310 (326)
T ss_dssp EEEECTTSCEEEEEETT--TEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEE
T ss_pred eeEECCCCCEEEEEeCC--CEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCCCCChhHhccCCCCceEE
Confidence 55555446666665433 36999999 788777887775455566655 677788877654422 25678
Q ss_pred EEeC
Q psy2521 493 HCNI 496 (783)
Q Consensus 493 ~~d~ 496 (783)
++++
T Consensus 311 ~~~~ 314 (326)
T 2ghs_A 311 ELGI 314 (326)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 7775
|
| >2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A | Back alignment and structure |
|---|
Probab=98.76 E-value=7.9e-09 Score=118.03 Aligned_cols=133 Identities=21% Similarity=0.135 Sum_probs=86.7
Q ss_pred EECCCCcEEEEEEEEecCcC-CCCCccEEEEecCCCCCccCC---------cCcHHHHHHHHcCCEEEEEecCCCCC-CC
Q psy2521 531 FRSKDGTRVPMYIIHRVGAL-RNRRNPVIIYGYGGYGVSVLP---------TFSISRCMFLRHFNGIYAIPNIRGGG-EL 599 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~-~~~~~P~ll~~hGg~~~~~~~---------~~~~~~~~~l~~~G~~v~~~~~RG~g-~~ 599 (783)
+.+.|.. .+-++.|+... ..++.|+||++|||....... .+.. ..+..+.|++|+.+|||.+. +|
T Consensus 75 ~~sedcl--~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~--~~la~~~~vvvV~~nYRLg~~Gf 150 (579)
T 2bce_A 75 YGNEDCL--YLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDG--EEIATRGNVIVVTFNYRVGPLGF 150 (579)
T ss_dssp ESCSCCC--EEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCC--HHHHHHHTCEEEEECCCCHHHHH
T ss_pred CCCCCCC--EEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccCh--HHHhcCCCEEEEEeCCccccccC
Confidence 3455654 44566776542 346789999999984322111 1222 23334447999999999532 12
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGAL 670 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~ 670 (783)
.... + ....+...+.|+.+|++|+.++ -..||+||.|+|+|+||.+++.++.. ...+|+++|+.+|..
T Consensus 151 l~~~-~--~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~~ 223 (579)
T 2bce_A 151 LSTG-D--SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp CCCS-S--TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred CcCC-C--CCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCCc
Confidence 1100 0 0111122588999999999875 23699999999999999999888765 346999999998853
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.76 E-value=3.9e-06 Score=91.42 Aligned_cols=218 Identities=15% Similarity=0.154 Sum_probs=127.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++||.+... ..|++||+++++.+.... .......++|+||++.|+....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-------------- 185 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAED-----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-------------- 185 (393)
T ss_dssp BEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET--------------
T ss_pred eEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC--------------
Confidence 37789999999999876432 469999999987653221 1222357899999998875552
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.++++.+.. ....+.... ....+.++| ||++|+....+ ..|.++|+.++. . ...+.
T Consensus 186 --d~~v~iwd~~~~~--~~~~~~~~~---~v~~~~~~~~~~~~l~~~s~d----~~v~iwd~~~~~--~------~~~~~ 246 (393)
T 1erj_A 186 --DRTVRIWDLRTGQ--CSLTLSIED---GVTTVAVSPGDGKYIAAGSLD----RAVRVWDSETGF--L------VERLD 246 (393)
T ss_dssp --TSEEEEEETTTTE--EEEEEECSS---CEEEEEECSTTCCEEEEEETT----SCEEEEETTTCC--E------EEEEC
T ss_pred --CCcEEEEECCCCe--eEEEEEcCC---CcEEEEEECCCCCEEEEEcCC----CcEEEEECCCCc--E------EEeec
Confidence 2368888887643 222333222 245788999 89988754332 568899987741 1 11110
Q ss_pred ------cCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC---------C-cEEeecCCCCceEEEEEEee
Q psy2521 368 ------PGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK---------N-WKTLIPEDENRTLDVVAAVA 429 (783)
Q Consensus 368 ------~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~---------~-~~~li~~~~~~~l~~~~~~~ 429 (783)
.+..... . .|+|+|+.|+..+. ...|..+|+...... . ...+..+. ..+. .+.+..
T Consensus 247 ~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~----d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~-~~~~~~ 320 (393)
T 1erj_A 247 SENESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK-DFVL-SVATTQ 320 (393)
T ss_dssp ------CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC---------------CEEEEEECCS-SCEE-EEEECG
T ss_pred ccccCCCCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEECCCCCCcccccCCCCCcceEEEeccc-CcEE-EEEECC
Confidence 1112222 2 58899987765443 245777777543210 0 11222222 2233 333333
Q ss_pred CCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 430 NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 430 g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
++.++++...++ .|.+||+.+|+.+..+....+.|..+.+.+
T Consensus 321 ~~~~l~sgs~D~--~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 321 NDEYILSGSKDR--GVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp GGCEEEEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred CCCEEEEEeCCC--eEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 355666666664 688999988887766765544555554443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-06 Score=91.40 Aligned_cols=236 Identities=8% Similarity=-0.017 Sum_probs=133.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++.|+|||+.|.++-..+ ..|+++|.+++ ............+++|+|||+ |+.+.. .
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~----~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~---------------~ 88 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQ----NRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGH-LIACSH---------------G 88 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGG----TEEEEEETTSC-EEEEESSCSSEEEEEECTTCC-EEEEET---------------T
T ss_pred ccCCeEeCCCCEEEEEeCCC----CEEEEEECCCC-eEEEECCCCCcceeeECCCCc-EEEEec---------------C
Confidence 46799999999777765443 36999999988 433222222235789999997 544441 1
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCe--eEEEEEEecCCcEEEEEEecC-------------CCCcEEEEEECCCCCCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRS--LGLHSEVTDCGRYLLVSTSNN-------------TQGSDLHYFDLHSLPDG 355 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~--~~~~~~~SpDGk~l~~~~~~~-------------~~~~~l~~~dl~~g~~~ 355 (783)
...|++++..++.. ..+........ ....+.++|||+.++-....+ .....||.++..+ .
T Consensus 89 ~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g-~-- 163 (296)
T 3e5z_A 89 LRRLERQREPGGEW--ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG-T-- 163 (296)
T ss_dssp TTEEEEECSTTCCE--EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-C--
T ss_pred CCeEEEEcCCCCcE--EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-C--
Confidence 23677777654421 12221111110 113578899998544211000 0125899988763 1
Q ss_pred cccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCC-CCC-CCcEEeecCCCCceEEEEEEeeCCE
Q psy2521 356 KISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN-PCE-KNWKTLIPEDENRTLDVVAAVANNK 432 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~-~~~-~~~~~li~~~~~~~l~~~~~~~g~~ 432 (783)
...+......... .|+|||+.+ +.... ...|++++++. +.. . -..++ .........+.+..++.
T Consensus 164 -------~~~~~~~~~~~~gi~~s~dg~~l-v~~~~---~~~i~~~~~~~~g~~~~-~~~~~-~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 164 -------LSAPIRDRVKPNGLAFLPSGNLL-VSDTG---DNATHRYCLNARGETEY-QGVHF-TVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp -------EEEEECCCSSEEEEEECTTSCEE-EEETT---TTEEEEEEECSSSCEEE-EEEEE-CCSSSCCCSEEEBTTSC
T ss_pred -------EEEeecCCCCCccEEECCCCCEE-EEeCC---CCeEEEEEECCCCcCcC-CCeEe-eCCCCCCCeEEECCCCC
Confidence 2222222222122 589999887 54332 34688888762 221 0 02333 22122223444444466
Q ss_pred EEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeec-cccccEEEEEEecCCCCceEEEEeC
Q psy2521 433 LIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~-~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|++.. + ..|.+|++ +|+.+..+..+.+ +..+.. .++++.++++-.. .++++++
T Consensus 231 l~v~~--~--~~v~~~~~-~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~ 284 (296)
T 3e5z_A 231 IWASA--G--DGVHVLTP-DGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIET 284 (296)
T ss_dssp EEEEE--T--TEEEEECT-TSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEEC
T ss_pred EEEEc--C--CeEEEECC-CCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEc
Confidence 77666 2 46999999 5887777877644 444444 5677788876432 7999998
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=3e-05 Score=88.46 Aligned_cols=290 Identities=12% Similarity=0.067 Sum_probs=154.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECC--CCccccccccccccCeeEEe----eCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD--TGKDYPEVLKNVKFPSISWT----HDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~--tg~~~~~~~~~~~~~~~~Ws----pDg~~l~y~~~~~~~~~~~g~ 284 (783)
..++.+||||+++..+ +.. ..|.++|+. +++.+.....+....++++| |||+++|.+....
T Consensus 199 p~~v~~SpDGr~lyv~-~~d----g~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~-------- 265 (567)
T 1qks_A 199 VHISRLSASGRYLFVI-GRD----GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP-------- 265 (567)
T ss_dssp EEEEEECTTSCEEEEE-ETT----SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET--------
T ss_pred ccceEECCCCCEEEEE-cCC----CeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccC--------
Confidence 3478999999987654 332 369999996 77654332223333578999 7999998777432
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecC----C------CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFP----N------GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~----~------~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
..|.+++..+... +...... + .+ ....+..|+++..+++... +...|+++|..+.
T Consensus 266 -------~~v~ViD~~t~~~--~~~i~~~~~~~~~~~~~p~~-rva~i~~s~~~~~~vv~~~---~~g~v~~vd~~~~-- 330 (567)
T 1qks_A 266 -------PQYVIMDGETLEP--KKIQSTRGMTYDEQEYHPEP-RVAAILASHYRPEFIVNVK---ETGKILLVDYTDL-- 330 (567)
T ss_dssp -------TEEEEEETTTCCE--EEEEECCEECTTTCCEESCC-CEEEEEECSSSSEEEEEET---TTTEEEEEETTCS--
T ss_pred -------CeEEEEECCCCcE--EEEEeccccccccccccCCC-ceEEEEEcCCCCEEEEEec---CCCeEEEEecCCC--
Confidence 3556666554321 1111100 0 11 2245677898887666542 3479999998762
Q ss_pred CcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC-CC-Cce--EEEEEEeeC
Q psy2521 355 GKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DE-NRT--LDVVAAVAN 430 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~-~~-~~~--l~~~~~~~g 430 (783)
.. .....+-.+....-..|++||++|++..+. ..+|..+|+++++ ....++- +. .+. ...+..+++
T Consensus 331 ~~----~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~k---l~~~i~vgg~~Phpg~g~~~~~p~~ 400 (567)
T 1qks_A 331 NN----LKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK---LVAIEDTGGQTPHPGRGANFVHPTF 400 (567)
T ss_dssp SE----EEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE---EEEEEECSSSSBCCTTCEEEEETTT
T ss_pred cc----ceeeeeeccccccCceECCCCCEEEEEeCC---CCeEEEEECCCCc---EEEEEeccCcCCCCccceeeECCCC
Confidence 11 111111111111111499999988875543 3469999998764 3333333 11 111 111222333
Q ss_pred CEEEEEEecCCeeEEEEEECCC-------CceeeeecCC-CeEEEeeeccccccEEEEEEecCCCC-----ceEEEEeCC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNT-------GKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQP-----GTIYHCNIP 497 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~-------G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P-----~~vy~~d~~ 497 (783)
+.+++ ...-+...|.++|.++ -+.++.|... .|.+ .+..+|+++.+|+.. ...| .+|..+|+.
T Consensus 401 g~v~~-t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~-~i~~~p~~~~l~v~~--~~~~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 401 GPVWA-TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL-FIKTHPNSQYLYVDA--TLNPEAEISGSVAVFDIK 476 (567)
T ss_dssp EEEEE-EEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-CEECCTTCSEEEEEC--TTCSSHHHHTCEEEEEGG
T ss_pred CcEEE-eCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCE-EEEeCCCCCeEEEec--CCCCCcccCceEEEEECC
Confidence 45544 4444445799999866 3455667654 3333 345678888888653 2333 378899983
Q ss_pred CCcCCCCCCc-eEEEeeccCCCCCCCCCeEEEEEEECCCCcEEEEEEE
Q psy2521 498 ENITDQDDFK-PTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYII 544 (783)
Q Consensus 498 ~~~~~tg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~ 544 (783)
... .+|..+ .+++.-.+..++....-.+.++.| ++||.++-..+.
T Consensus 477 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~~s~~ 522 (567)
T 1qks_A 477 AMT-GDGSDPEFKTLPIAEWAGITEGQPRVVQGEF-NKDGTEVWFSVW 522 (567)
T ss_dssp GCC-CSSSCCCEEEECHHHHHTCCSSCCEEEEEEE-CTTSSEEEEEEE
T ss_pred ccc-ccccCCCcEEeccccccccCCCCcceEeeeE-CCCCCEEEEEee
Confidence 100 011001 123211000112112224566666 578888766543
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.74 E-value=4.6e-06 Score=90.14 Aligned_cols=241 Identities=10% Similarity=0.054 Sum_probs=135.5
Q ss_pred EeeEEECCCC-cEEEEEEecCCCceEEEEEEECCCCccccccc---cccccCeeEEee-CCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNG-KHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL---KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG-~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~---~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..++||||| ++||.+.. + ..|++||+.+++...... .......++|+| |++.|+....
T Consensus 76 v~~~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----------- 139 (383)
T 3ei3_B 76 VTSLEWHPTHPTTVAVGSK-G----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI----------- 139 (383)
T ss_dssp EEEEEECSSCTTEEEEEEB-T----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET-----------
T ss_pred EEEEEECCCCCCEEEEEcC-C----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC-----------
Confidence 6778999999 77776654 2 359999999887543221 222346899999 4555554441
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCC-CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPN-GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~-~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|.++++.+. ....+.... .......+.|+||+++|+.... ...|+++|+.+. ...
T Consensus 140 -----d~~i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~---------~~~ 198 (383)
T 3ei3_B 140 -----RGATTLRDFSGS---VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS----TGRLLLLGLDGH---------EIF 198 (383)
T ss_dssp -----TTEEEEEETTSC---EEEEEECCCCSSCCEEEEEEETTTTEEEEEET----TSEEEEEETTSC---------EEE
T ss_pred -----CCEEEEEECCCC---ceEEEeccCCCCCCeEEEEECCCCCEEEEECC----CCCEEEEECCCC---------EEE
Confidence 236888888742 222222221 1234568899999998876432 268999998541 122
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCC-CCcEEeecCCCCceEEEEEEee-CCEEEEEEecCC
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNV 441 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~-~~~~~li~~~~~~~l~~~~~~~-g~~l~~~~~~~g 441 (783)
.+......... .|+|+++.+++.... ...|..+|+..... ......+.+. . .+..+.+.. ++.+++....+
T Consensus 199 ~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~-~-~v~~~~~s~~~~~~l~~~~~d- 272 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKDKNSYIAEMPHE-K-PVNAAYFNPTDSTKLLTTDQR- 272 (383)
T ss_dssp EEECSSSCEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCSTTCEEEEEECS-S-CEEEEEECTTTSCEEEEEESS-
T ss_pred EeccCCCcEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCcccceEEEecCC-C-ceEEEEEcCCCCCEEEEEcCC-
Confidence 22222222222 589998844444433 34688888875321 1123333333 3 334444433 35555555555
Q ss_pred eeEEEEEECCCCceeeeecCC-------CeEEEeeeccccccEEEEEEe-----cCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLD-------LGQITHISGRRKYNEVFYGFT-----SFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~-------~g~v~~~s~~~d~~~l~~~~s-----s~~~P~~vy~~d~ 496 (783)
..|.+||+.+++....+... ...+ ...+++++..+.+.++ +-..-..++.||+
T Consensus 273 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 273 -NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI-KATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDA 337 (383)
T ss_dssp -SEEEEEETTBTTSCSEEEECCBCCCTTSCCC-CCEECSSSSEEEEECBCCTTTCTTCCCCEEEEET
T ss_pred -CcEEEEECCCCccccccccccccccccccce-EEeccCCCCceEEEecCCcccccCCCCeEEEEec
Confidence 37899999777654444311 1111 1233445555554443 2234567889998
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.74 E-value=6.5e-06 Score=88.33 Aligned_cols=237 Identities=9% Similarity=0.064 Sum_probs=138.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++||-+.. ...|++||+.+++.... .........++|+|||+.|+....
T Consensus 66 ~V~~~~~s~d~~~l~s~s~-----Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~-------------- 126 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQ-----DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL-------------- 126 (354)
T ss_dssp CEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST--------------
T ss_pred eEEEEEECCCCCEEEEEeC-----CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC--------------
Confidence 4778999999998875542 25799999988875432 122223468899999998775542
Q ss_pred cCCceEEEEEcCCCCC----CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 289 HMGQKIYYHVLGTEQD----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~----~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...+.++++..... .....+... ......+.|+||++.|+..+. ...|.++|+.++. ..
T Consensus 127 --d~~i~v~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~t~s~----D~~v~lwd~~~~~---------~~ 189 (354)
T 2pbi_B 127 --DNKCSVYPLTFDKNENMAAKKKSVAMH--TNYLSACSFTNSDMQILTASG----DGTCALWDVESGQ---------LL 189 (354)
T ss_dssp --TSEEEEEECCCCTTCCSGGGCEEEEEC--SSCEEEEEECSSSSEEEEEET----TSEEEEEETTTCC---------EE
T ss_pred --CCCEEEEEEeccccccccccceeeecc--CCcEEEEEEeCCCCEEEEEeC----CCcEEEEeCCCCe---------EE
Confidence 22455666543311 111122211 224567899999999875432 2589999998741 11
Q ss_pred eeecCccceeE--EEEe--eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 365 TVIPGMDHHHE--IIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 365 ~l~~~~~~~~~--~~s~--dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..+.+...... .+++ +|+.|+..+. .+.|..+|+.++. ....+... ...+..+.+..++.++++...+
T Consensus 190 ~~~~~h~~~v~~~~~~~~~~g~~l~sgs~----Dg~v~~wd~~~~~---~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 190 QSFHGHGADVLCLDLAPSETGNTFVSGGC----DKKAMVWDMRSGQ---CVQAFETH-ESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp EEEECCSSCEEEEEECCCSSCCEEEEEET----TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECTTSSEEEEEETT
T ss_pred EEEcCCCCCeEEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCc---EEEEecCC-CCCeEEEEEeCCCCEEEEEeCC
Confidence 12222222222 3555 4555554332 3458888987754 22233322 2334444444335566666666
Q ss_pred CeeEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+ .|.+||+.+++.+..+... ...+..+.+++++..++.... -..+..||+
T Consensus 262 ~--~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~----d~~i~vwd~ 313 (354)
T 2pbi_B 262 A--TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN----DYTINVWDV 313 (354)
T ss_dssp S--CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----TSCEEEEET
T ss_pred C--eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC----CCcEEEEEC
Confidence 4 5888999777655444432 234556777888876665443 247889998
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=98.73 E-value=5.4e-06 Score=88.35 Aligned_cols=221 Identities=10% Similarity=0.055 Sum_probs=132.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc---ccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP---EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~---~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..++|||||++|+.+... ..++++|+.+++... ... .........|+++++ |+....
T Consensus 100 v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~----------- 162 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG----------- 162 (340)
T ss_dssp EEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEET-----------
T ss_pred EEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEEC-----------
Confidence 6678999999999876432 579999998764211 111 111224678998875 443331
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|.++++.+.. ....+.. +......+.|+|||++++.... ...|.++|+.++. ...
T Consensus 163 -----d~~i~~wd~~~~~--~~~~~~~--h~~~v~~~~~~~~~~~l~sg~~----d~~v~~wd~~~~~---------~~~ 220 (340)
T 1got_B 163 -----DTTCALWDIETGQ--QTTTFTG--HTGDVMSLSLAPDTRLFVSGAC----DASAKLWDVREGM---------CRQ 220 (340)
T ss_dssp -----TSCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCS---------EEE
T ss_pred -----CCcEEEEECCCCc--EEEEEcC--CCCceEEEEECCCCCEEEEEeC----CCcEEEEECCCCe---------eEE
Confidence 2357888887642 2223322 2234568899999998774432 2578999998731 111
Q ss_pred eecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
.+.+...... .|+|+|+.|+..+.. +.|..+|+.... ....+... ....+..+.+..++.+++....++
T Consensus 221 ~~~~h~~~v~~v~~~p~~~~l~s~s~d----~~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~- 292 (340)
T 1got_B 221 TFTGHESDINAICFFPNGNAFATGSDD----ATCRLFDLRADQ---ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF- 292 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---EEEEECCTTCCSCEEEEEECTTSSEEEEEETTS-
T ss_pred EEcCCcCCEEEEEEcCCCCEEEEEcCC----CcEEEEECCCCc---EEEEEccCCcccceEEEEECCCCCEEEEECCCC-
Confidence 2222222222 589998877754432 357888886643 11122222 112344444444466666666664
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
.|.+||+.+++.+..+....+.|..+.+++++..++
T Consensus 293 -~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 293 -NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp -EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred -eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEE
Confidence 689999977877677766566677788888876554
|
| >1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A | Back alignment and structure |
|---|
Probab=98.73 E-value=2.3e-08 Score=105.06 Aligned_cols=186 Identities=13% Similarity=-0.032 Sum_probs=106.1
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHH-HHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE-YMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~-~l~~~~ 630 (783)
.+..|.||++||..+......|.. ....|. .+|.|+.+|+||.|... .....++++.+.+. .+.+.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~----------~~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTR-LAGALR-GIAPVRAVPQPGYEEGE----------PLPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHH-HHHHTS-SSCCBCCCCCTTSSTTC----------CBCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEECCCcccCcHHHHHH-HHHhcC-CCceEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh-
Confidence 356789999999876552233443 334555 47999999999954311 11234666665543 44443
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEEcCCcchhhh-cccccccccchhh-hCC---CCCHHHHHH---
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGALDMLR-FNKFTIAYYSESE-FGS---PNNKTHFHN--- 699 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~~~~~~d~~~-~~~~~~~~~~~~~-~g~---p~~~~~~~~--- 699 (783)
.+.+++.++|||+||.++..++.++| +.++++|...+...... ... ......... +.. +........
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMN-AWLEELTATLFDRETVRMDDTRLTALGA 208 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHH-HHHHHHHGGGCCCCSSCCCHHHHHHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHH-HHHHHHHHHHHhCcCCccchHHHHHHHH
Confidence 33468999999999999999999988 47889988877543211 000 000000000 111 111111111
Q ss_pred -HHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 700 -LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 700 -~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
+.....+ .... +.+| +|+++| .|+.+++.+ .. +... -..+..+.++++ ||...
T Consensus 209 ~~~~~~~~-~~~~----i~~P-~lii~G-~d~~~~~~~-~~----~~~~------~~~~~~~~~i~g-gH~~~ 262 (300)
T 1kez_A 209 YDRLTGQW-RPRE----TGLP-TLLVSA-GEPMGPWPD-DS----WKPT------WPFEHDTVAVPG-DHFTM 262 (300)
T ss_dssp HHHHTTTC-CCCC----CSCC-BEEEEE-SSCSSCCCS-SC----CSCC------CSSCCEEEEESS-CTTTS
T ss_pred HHHHHhcC-CCCC----CCCC-EEEEEe-CCCCCCCcc-cc----hhhh------cCCCCeEEEecC-CChhh
Confidence 1111111 1122 6777 999999 577887765 21 2221 023467888898 99875
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.73 E-value=4.6e-06 Score=90.76 Aligned_cols=233 Identities=13% Similarity=0.076 Sum_probs=138.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccc---------------cCeeEEeeCCCEEEEEE
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVK---------------FPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~---------------~~~~~WspDg~~l~y~~ 273 (783)
.+..++|+|||++|+.+.. + ..|+++|+.+++.+.... .... ...+.|+|++. ++...
T Consensus 151 ~v~~~~~~~~~~~l~~~~~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 224 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDV-E----NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPG 224 (425)
T ss_dssp CEEEEEECTTSSEEEEEET-T----CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEEC
T ss_pred cEEEEEECCCCCEEEEEec-C----CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEc
Confidence 4788999999999886643 2 459999999887543211 1111 46789999864 43333
Q ss_pred eecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCC
Q psy2521 274 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 353 (783)
Q Consensus 274 ~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~ 353 (783)
. ...|+++++.+... ...+.... .....+.|+|||++|+..... ..|+++|+.++.
T Consensus 225 ~----------------~g~i~~~d~~~~~~--~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~ 280 (425)
T 1r5m_A 225 P----------------KGAIFVYQITEKTP--TGKLIGHH--GPISVLEFNDTNKLLLSASDD----GTLRIWHGGNGN 280 (425)
T ss_dssp G----------------GGCEEEEETTCSSC--SEEECCCS--SCEEEEEEETTTTEEEEEETT----SCEEEECSSSBS
T ss_pred C----------------CCeEEEEEcCCCce--eeeeccCC--CceEEEEECCCCCEEEEEcCC----CEEEEEECCCCc
Confidence 1 23688888876532 22333222 234678999999988765422 578999987731
Q ss_pred CCcccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC
Q psy2521 354 DGKISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 354 ~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~ 431 (783)
....+ ....... . .|++++ .++..+. .+.|..+|+.++. ....+... ...+..+.+..++
T Consensus 281 --------~~~~~-~~~~~~i~~~~~~~~~-~l~~~~~----d~~i~i~d~~~~~---~~~~~~~~-~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 281 --------SQNCF-YGHSQSIVSASWVGDD-KVISCSM----DGSVRLWSLKQNT---LLALSIVD-GVPIFAGRISQDG 342 (425)
T ss_dssp --------CSEEE-CCCSSCEEEEEEETTT-EEEEEET----TSEEEEEETTTTE---EEEEEECT-TCCEEEEEECTTS
T ss_pred --------cceEe-cCCCccEEEEEECCCC-EEEEEeC----CCcEEEEECCCCc---EeEecccC-CccEEEEEEcCCC
Confidence 11222 2222222 2 588888 4444333 3468889987654 22223222 2234444444335
Q ss_pred EEEEEEecCCeeEEEEEECCCCc--------------------eeeeecCCCe--EEEeeeccccccEEEEEEecCCCCc
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGK--------------------RLHSFPLDLG--QITHISGRRKYNEVFYGFTSFLQPG 489 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~--------------------~~~~l~~~~g--~v~~~s~~~d~~~l~~~~ss~~~P~ 489 (783)
.+++....++ .|.+|++.+++ .+..+..... .+..+.+++++..++....+ .
T Consensus 343 ~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g 416 (425)
T 1r5m_A 343 QKYAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSL----Q 416 (425)
T ss_dssp SEEEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESS----S
T ss_pred CEEEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecC----c
Confidence 5555555554 68889987666 5566665533 77788888888766543322 4
Q ss_pred eEEEEeC
Q psy2521 490 TIYHCNI 496 (783)
Q Consensus 490 ~vy~~d~ 496 (783)
.++.||+
T Consensus 417 ~i~iw~~ 423 (425)
T 1r5m_A 417 EGSVVAI 423 (425)
T ss_dssp CCEEEEC
T ss_pred eEEEEee
Confidence 5777776
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=98.72 E-value=3.3e-06 Score=92.64 Aligned_cols=223 Identities=13% Similarity=0.137 Sum_probs=135.5
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..++|+|||++|+-+... .+|++||+.+++.+.... .......++|+|||+.|+-...
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~------------- 212 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR------------- 212 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET-------------
T ss_pred CcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC-------------
Confidence 347889999999988765432 459999999887643221 1222368899999998765552
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.+|++.+.. .+..+.. ...+...+.++|||++|+....+ ..|.++|+.++. ....+
T Consensus 213 ---D~~i~~wd~~~~~--~~~~~~~--h~~~v~~~~~~~~g~~l~s~s~D----~~v~vwd~~~~~---------~~~~~ 272 (410)
T 1vyh_C 213 ---DKTIKMWEVQTGY--CVKTFTG--HREWVRMVRPNQDGTLIASCSND----QTVRVWVVATKE---------CKAEL 272 (410)
T ss_dssp ---TSEEEEEETTTCC--EEEEEEC--CSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC---------EEEEE
T ss_pred ---CCeEEEEECCCCc--EEEEEeC--CCccEEEEEECCCCCEEEEEcCC----CeEEEEECCCCc---------eeeEe
Confidence 2368888887653 2223332 22345678899999988754332 578889987731 11111
Q ss_pred cCccceeE--EEEee--------------------CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE
Q psy2521 368 PGMDHHHE--IIANN--------------------GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 425 (783)
Q Consensus 368 ~~~~~~~~--~~s~d--------------------g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~ 425 (783)
.+...... .|+|+ |..|+ .... ...|..+|+.++. ....+..+. . .+..+
T Consensus 273 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~-sgs~---D~~i~iwd~~~~~--~~~~~~~h~-~-~v~~v 344 (410)
T 1vyh_C 273 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL-SGSR---DKTIKMWDVSTGM--CLMTLVGHD-N-WVRGV 344 (410)
T ss_dssp CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEE-EEET---TSEEEEEETTTTE--EEEEEECCS-S-CEEEE
T ss_pred cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEE-EEeC---CCeEEEEECCCCc--eEEEEECCC-C-cEEEE
Confidence 11121111 35554 33343 3332 3468888987654 123343333 2 33444
Q ss_pred EEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 426 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 426 ~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
.+..++.++++...++ .|.+||+.+++.+..+....+.|..+.+++++..++
T Consensus 345 ~~~~~g~~l~s~s~D~--~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~ 396 (410)
T 1vyh_C 345 LFHSGGKFILSCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 396 (410)
T ss_dssp EECSSSSCEEEEETTT--EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred EEcCCCCEEEEEeCCC--eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE
Confidence 4443355566666664 688999987877677766556677888888776544
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=98.70 E-value=7.3e-06 Score=85.80 Aligned_cols=223 Identities=9% Similarity=-0.006 Sum_probs=131.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+....|+|||++|+-+.. ..+|++||+.+|+.+.... .......++|+||++.|+-...
T Consensus 57 ~v~~~~~~~~~~~l~s~s~-----d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~-------------- 117 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSD-----DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD-------------- 117 (304)
T ss_dssp CEEEEEEEGGGTEEEEEET-----TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET--------------
T ss_pred cEEEEEEeCCCCEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECC--------------
Confidence 3678899999999886643 2579999999998654221 2222358899999987765442
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.++++.+... -...+.. +......+.|+| |++.|+... ....|.++|+..+. +...+.
T Consensus 118 --D~~v~lWd~~~~~~-~~~~~~~--h~~~v~~v~~~p~~~~~l~sgs----~D~~v~iwd~~~~~--------~~~~~~ 180 (304)
T 2ynn_A 118 --DLTVKLWNWENNWA-LEQTFEG--HEHFVMCVAFNPKDPSTFASGC----LDRTVKVWSLGQST--------PNFTLT 180 (304)
T ss_dssp --TSCEEEEEGGGTTE-EEEEECC--CCSCEEEEEECTTCTTEEEEEE----TTSEEEEEETTCSS--------CSEEEE
T ss_pred --CCeEEEEECCCCcc-hhhhhcc--cCCcEEEEEECCCCCCEEEEEe----CCCeEEEEECCCCC--------ccceec
Confidence 23577888765421 1122322 223456789999 566665432 22589999997631 122233
Q ss_pred cCccceeE--EEEe--eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 368 PGMDHHHE--IIAN--NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 368 ~~~~~~~~--~~s~--dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
.+...... .+.+ ++..|+..+. ...|..+|+.++. ....+..+. .. +..+.+..++.++++...|+
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~~--~~~~~~~h~-~~-v~~~~~~p~~~~l~s~s~Dg-- 250 (304)
T 2ynn_A 181 TGQERGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTKS--CVATLEGHM-SN-VSFAVFHPTLPIIISGSEDG-- 250 (304)
T ss_dssp CCCTTCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTTE--EEEEEECCS-SC-EEEEEECSSSSEEEEEETTS--
T ss_pred cCCcCcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCCc--cceeeCCCC-CC-EEEEEECCCCCEEEEEcCCC--
Confidence 22222222 3554 4455544332 3468888987654 123333333 33 33333333356677777765
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeeccccccEE
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEV 478 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l 478 (783)
.|.+||+.+++.++.+......+..+...+++...
T Consensus 251 ~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 251 TLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (304)
T ss_dssp CEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGG
T ss_pred eEEEEECCCCceeeeccCCCccEEEEEECCCCCce
Confidence 58899998888877777654445556656665543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.70 E-value=6.6e-06 Score=89.77 Aligned_cols=238 Identities=10% Similarity=0.055 Sum_probs=141.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++|||||++|+.+... ..|++||+.+++.+.... .......+.| +++.|+....
T Consensus 136 ~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~-------------- 194 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR-------------- 194 (401)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET--------------
T ss_pred CEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC--------------
Confidence 47889999999999887542 359999999987654221 2223356778 5565555441
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...|+++++.+... ....+... ......+.|+|||++|+....+ ..|.++|+.++. ....+ .
T Consensus 195 --dg~i~i~d~~~~~~-~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~--------~~~~~-~ 256 (401)
T 4aez_A 195 --SGAIHHHDVRIANH-QIGTLQGH--SSEVCGLAWRSDGLQLASGGND----NVVQIWDARSSI--------PKFTK-T 256 (401)
T ss_dssp --TSEEEEEETTSSSC-EEEEEECC--SSCEEEEEECTTSSEEEEEETT----SCEEEEETTCSS--------EEEEE-C
T ss_pred --CCCEEEEecccCcc-eeeEEcCC--CCCeeEEEEcCCCCEEEEEeCC----CeEEEccCCCCC--------ccEEe-c
Confidence 23688888875432 22233322 2345688999999998865432 579999998731 11112 2
Q ss_pred Ccccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
...... . .|+|+++.+++.... .....|..+|+.++. ....+... ..+....+..+ +..++.........|.
T Consensus 257 ~~~~~v~~~~~~p~~~~ll~~~~g-s~d~~i~i~d~~~~~---~~~~~~~~-~~v~~~~~s~~-~~~l~~~~g~~dg~i~ 330 (401)
T 4aez_A 257 NHNAAVKAVAWCPWQSNLLATGGG-TMDKQIHFWNAATGA---RVNTVDAG-SQVTSLIWSPH-SKEIMSTHGFPDNNLS 330 (401)
T ss_dssp CCSSCCCEEEECTTSTTEEEEECC-TTTCEEEEEETTTCC---EEEEEECS-SCEEEEEECSS-SSEEEEEECTTTCEEE
T ss_pred CCcceEEEEEECCCCCCEEEEecC-CCCCEEEEEECCCCC---EEEEEeCC-CcEEEEEECCC-CCeEEEEeecCCCcEE
Confidence 222222 2 589988888876531 224569999987754 22333332 33333334444 4444443311124688
Q ss_pred EEECCCCceeee--ecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHS--FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~--l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|++.+++.... +....+.+..+.+++++..++.. + .-..+..||+
T Consensus 331 v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-~---~dg~i~iw~~ 378 (401)
T 4aez_A 331 IWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA-A---SDENLKFWRV 378 (401)
T ss_dssp EEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE-C---TTSEEEEEEC
T ss_pred EEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE-e---CCCcEEEEEC
Confidence 888866654333 33334556677788888766532 2 2357999998
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=98.70 E-value=1.8e-06 Score=94.45 Aligned_cols=235 Identities=10% Similarity=0.060 Sum_probs=135.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.....+||||++||.+... ..|++||+.+++..... ........++|+||++.|+....
T Consensus 100 ~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~--------------- 159 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTE-----GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ--------------- 159 (420)
T ss_dssp EEEEEECSSSCEEEEEETT-----SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---------------
T ss_pred eEEEEEecCCCEEEEEECC-----CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---------------
Confidence 3445789999999877542 35999999988765432 22223468999999997775552
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...|+++++.+.... ..+... ......+.|+|||++|+....+ ..|.++|+.++.. ...+...
T Consensus 160 -d~~i~iwd~~~~~~~--~~~~~h--~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~~--------~~~~~~~ 222 (420)
T 3vl1_A 160 -DMQLKIWSVKDGSNP--RTLIGH--RATVTDIAIIDRGRNVLSASLD----GTIRLWECGTGTT--------IHTFNRK 222 (420)
T ss_dssp -TSEEEEEETTTCCCC--EEEECC--SSCEEEEEEETTTTEEEEEETT----SCEEEEETTTTEE--------EEEECBT
T ss_pred -CCeEEEEeCCCCcCc--eEEcCC--CCcEEEEEEcCCCCEEEEEcCC----CcEEEeECCCCce--------eEEeecC
Confidence 236888898765432 233322 2245688999999998854332 5788999877311 1111100
Q ss_pred --cc---------------------cee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEE
Q psy2521 370 --MD---------------------HHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDV 424 (783)
Q Consensus 370 --~~---------------------~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~ 424 (783)
.. ... ..|+|+|+.|+..+. .+.|..+|+.++. ....+.... ...+..
T Consensus 223 ~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~--~~~~~~~~~-~~~v~~ 295 (420)
T 3vl1_A 223 ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----SGVITVHNVFSKE--QTIQLPSKF-TCSCNS 295 (420)
T ss_dssp TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET----TSCEEEEETTTCC--EEEEECCTT-SSCEEE
T ss_pred CCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC----CCeEEEEECCCCc--eeEEccccc-CCCcee
Confidence 00 000 136778777765443 2458888987654 122232222 233444
Q ss_pred EEEeeCCE-EEEEEecCCeeEEEEEECCCCce-eeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 425 VAAVANNK-LIVHYIQNVRSVMDLHDLNTGKR-LHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 425 ~~~~~g~~-l~~~~~~~g~~~l~~~dl~~G~~-~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+..++. +++....++ .|.+||+.+++. +..+... ...+..+. .+++. ++++. + .-..+..+|+
T Consensus 296 ~~~~~~~~~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~-~l~s~-~--~d~~v~iw~~ 363 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENG--MLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGA-LFVSS-G--FDTSIKLDII 363 (420)
T ss_dssp EEECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTE-EEEEE-T--TTEEEEEEEE
T ss_pred EEEeCCCCCEEEEEeCCC--eEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCC-EEEEe-c--CCccEEEEec
Confidence 44443343 677776664 689999977653 4455432 33343442 23443 33333 2 2357888887
|
| >3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.5e-08 Score=115.92 Aligned_cols=126 Identities=20% Similarity=0.153 Sum_probs=82.6
Q ss_pred EEEEEEEecCcC---CCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhccccCCc
Q psy2521 539 VPMYIIHRVGAL---RNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 539 v~~~~~~p~~~~---~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~~~~~~ 613 (783)
+.+.++.|++.. ..++.|+|||+|||...... ..+... .+..+.|++|+.+|||.+. +|... . .....+.
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~--~la~~~~~vvv~~~YRl~~~Gfl~~--~-~~~~~~n 186 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGS--VLASYGNVIVITVNYRLGVLGFLST--G-DQAAKGN 186 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCCH--HHHHHHTCEEEEECCCCHHHHHCCC--S-SSSCCCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCch--hhhccCCEEEEEeCCcCcccccCcC--C-CCCCCCc
Confidence 455667776532 23568999999998433222 234432 3333336999999999632 11100 0 0011223
Q ss_pred ChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCC---CceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRP---ELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~lf~a~i~~~~~ 669 (783)
..+.|+.+|++|+.++ -..||+||.|+|.|+||.+++.++.... .+|+++|+.+|.
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 4589999999999875 2369999999999999999998887543 589999998863
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.68 E-value=1.4e-05 Score=86.07 Aligned_cols=289 Identities=15% Similarity=0.076 Sum_probs=150.7
Q ss_pred CCcEEeCCeEEEEEEcCCCC--eeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEe-----cCCCc
Q psy2521 161 SAPQRQENNYFYFHNKGLQN--HSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLS-----KSGSD 233 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~--~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~-----~~G~d 233 (783)
..|.+++.++|.. +.+... ...+++.+..+++...-+. .+.. - .+.+||||++|..+.. ..|..
T Consensus 9 ~~~~~~~~~~yv~-~~~~~~~~d~~v~v~D~~t~~~~~~i~------~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~ 79 (361)
T 2oiz_A 9 SVSAPQENRIYVM-DSVFMHLTESRVHVYDYTNGKFLGMVP------TAFN-G-HVQVSNDGKKIYTMTTYHERITRGKR 79 (361)
T ss_dssp CCSSCGGGEEEEE-ECCGGGGGGCEEEEEETTTCCEEEEEE------CCEE-E-EEEECTTSSEEEEEEEEETTSSSSCE
T ss_pred CcCCCCCCEEEEE-CCCCCccccCeEEEEECCCCeEEEEec------CCCC-C-ceEECCCCCEEEEEEecccccccCCC
Confidence 3444566665544 332111 1356666654443221111 1222 2 7899999998876643 13444
Q ss_pred eEEEEEEECCCCcccccc-cc------ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc
Q psy2521 234 WNTLHIKDVDTGKDYPEV-LK------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD 306 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~-~~------~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d 306 (783)
...|.++|+++++.+... .. +.....++++|||++||..... ....|.++++.+..
T Consensus 80 ~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~--------------~~~~v~v~d~~~~~--- 142 (361)
T 2oiz_A 80 SDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS--------------PATSIGIVDVAKGD--- 142 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES--------------SSEEEEEEETTTTE---
T ss_pred CCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC--------------CCCeEEEEECCCCc---
Confidence 567999999988765322 11 1223578999999988876532 12356777776542
Q ss_pred eeEEe-cCCCCee---------EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE
Q psy2521 307 IPVVE-FPNGRSL---------GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE 375 (783)
Q Consensus 307 ~~v~~-~~~~~~~---------~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~ 375 (783)
++.. .+-...+ ...+..++||+.+++..... ...+....... .+. +......
T Consensus 143 -~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~--g~~~~~~~~~~--------------~~~~~~~~~~~ 205 (361)
T 2oiz_A 143 -YVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGED--GKVASQSRSKQ--------------MFSVKDDPIFI 205 (361)
T ss_dssp -EEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTT--SSEEEEEECCC--------------CSCTTTSCBCS
T ss_pred -EEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCC--CcEeeeccccc--------------eEcCCCCceEE
Confidence 2222 1111100 01234556666554433211 11111111000 000 0000111
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEE--ee----------cCCCCceEEEEEEeeCCEEEEEEecC---
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT--LI----------PEDENRTLDVVAAVANNKLIVHYIQN--- 440 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~--li----------~~~~~~~l~~~~~~~g~~l~~~~~~~--- 440 (783)
..+++|+.+++.+. ...++.+|+.+........ +. |.+ ...+ ....+++++|+....+
T Consensus 206 ~~~~~g~~~~~~~~----~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g-~~~~--a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 206 APALDKDKAHFVSY----YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGG-YNLV--GLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp CCEECSSEEEEEBT----TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECC-SSCE--EEETTTTEEEEEEESSCCT
T ss_pred EecccCCEEEEEeC----CCeEEEEEecCCCceecccccccCccccccccccCC-eeEE--EEecCCCeEEEEEccCCCc
Confidence 24678888887653 2368999986543110000 00 111 1111 2334457777765522
Q ss_pred -----CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEee
Q psy2521 441 -----VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 513 (783)
Q Consensus 441 -----g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~ 513 (783)
....|+++|+++++.+..++.+. ..++..+++++.+|.+ +. .++..+|+ +++ +.+++..
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~--n~---~~v~v~D~-----~t~--~l~~~~~ 342 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTL--DG---GNVNVYDI-----SQP--EPKLLRT 342 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEE--CS---SCEEEEEC-----SSS--SCEEEEE
T ss_pred ccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEe--CC---CeEEEEEC-----CCC--cceeeEE
Confidence 23589999999999888887764 5567778999866643 22 78999999 566 3455544
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=98.67 E-value=9.8e-06 Score=87.51 Aligned_cols=243 Identities=11% Similarity=0.101 Sum_probs=138.9
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccccc---cccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN---VKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~---~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
..+..++||| |+++|+.+. .+ ..|++||+.++......... .....++|+||++.|+....
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------- 183 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSS-IR----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS---------- 183 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEE-TT----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEET----------
T ss_pred CceeEEEeCCCCCCEEEEEe-CC----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECC----------
Confidence 4578899999 667666543 22 46999999875433222111 22358999999998776652
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|+++++. .+....+... ......+.|+|++++++++... ...|.++|+.++.. .....
T Consensus 184 ------d~~i~i~d~~---~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~---d~~i~iwd~~~~~~-----~~~~~ 244 (383)
T 3ei3_B 184 ------TGRLLLLGLD---GHEIFKEKLH--KAKVTHAEFNPRCDWLMATSSV---DATVKLWDLRNIKD-----KNSYI 244 (383)
T ss_dssp ------TSEEEEEETT---SCEEEEEECS--SSCEEEEEECSSCTTEEEEEET---TSEEEEEEGGGCCS-----TTCEE
T ss_pred ------CCCEEEEECC---CCEEEEeccC--CCcEEEEEECCCCCCEEEEEeC---CCEEEEEeCCCCCc-----ccceE
Confidence 2368888883 2222333322 2345689999999954444433 25899999976311 01111
Q ss_pred eeecCccceeE-EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-----CceEEEEEEeeCCEEEEEE
Q psy2521 365 TVIPGMDHHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-----NRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-----~~~l~~~~~~~g~~l~~~~ 437 (783)
........... .|+| +|+.|+..+. ...|..+|+.+... ...+..+.. ...+...+.+++..+.+..
T Consensus 245 ~~~~~~~~v~~~~~s~~~~~~l~~~~~----d~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 245 AEMPHEKPVNAAYFNPTDSTKLLTTDQ----RNEIRVYSSYDWSK--PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp EEEECSSCEEEEEECTTTSCEEEEEES----SSEEEEEETTBTTS--CSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred EEecCCCceEEEEEcCCCCCEEEEEcC----CCcEEEEECCCCcc--ccccccccccccccccceEEeccCCCCceEEEe
Confidence 22222122222 5889 8888776543 34688888876542 222322110 1111122223323333332
Q ss_pred ecC------CeeEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQN------VRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~------g~~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+ ....|.+||+.+|+.+..+..+ .+.+..+.+++++..++.. + -..+..||+
T Consensus 319 s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s----d~~i~iw~~ 380 (383)
T 3ei3_B 319 YPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M----GFNILIWNR 380 (383)
T ss_dssp BCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E----TTEEEEEEC
T ss_pred cCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c----CCcEEEEec
Confidence 211 2357999999889887777653 3445445677888766443 3 267889988
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-05 Score=85.30 Aligned_cols=250 Identities=11% Similarity=0.056 Sum_probs=140.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..+++|+|||+ |.++-..+ ..|+++|.++++..... .......+++|+|||+ +++..... ..
T Consensus 47 ~~~~~~~~~g~-l~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~-----------~~ 109 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVFE----GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGD-----------FK 109 (333)
T ss_dssp EEEEEECTTSC-EEEEETTT----CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTT-----------SS
T ss_pred ccCcEECCCCC-EEEEECCC----CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCc-EEEEeCCC-----------CC
Confidence 56789999999 44332222 46999999998765432 1222335789999996 55554211 01
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC---CCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN---TQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~---~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
....|++++..+.... .+............+.++|||+.++ ..... .....||.++.+++. ...+
T Consensus 110 ~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~---------~~~~ 177 (333)
T 2dg1_A 110 STGGIFAATENGDNLQ--DIIEDLSTAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRT---------VTPI 177 (333)
T ss_dssp SCCEEEEECTTSCSCE--EEECSSSSCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCC---------EEEE
T ss_pred CCceEEEEeCCCCEEE--EEEccCccCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCE---------EEEe
Confidence 1246888877654321 1222111112345788999997554 33211 113679999887631 1222
Q ss_pred ecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEE----ee-cCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 367 IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT----LI-PEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 367 ~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~----li-~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
......... .|++||+.||+.... ...|+++++++... .... +. ..........+.+..++.+++....+
T Consensus 178 ~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~~g~-~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~ 253 (333)
T 2dg1_A 178 IQNISVANGIALSTDEKVLWVTETT---ANRLHRIALEDDGV-TIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ 253 (333)
T ss_dssp EEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSS-SEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT
T ss_pred ecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEecCCCc-CcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC
Confidence 222111122 589999988886543 34688888853210 1111 11 11111233445555446677665443
Q ss_pred CeeEEEEEECCCCceeeeecCCCe------EEEeeeccccccEEEEEEecC--CCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLG------QITHISGRRKYNEVFYGFTSF--LQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g------~v~~~s~~~d~~~l~~~~ss~--~~P~~vy~~d~ 496 (783)
..|.+||+ +|+.+..+..+.. .+..+..+++++.++++...- .....+|++++
T Consensus 254 --~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 254 --GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp --TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred --CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 36899998 6877677766522 344555567777888766542 23567999987
|
| >3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.3e-07 Score=94.28 Aligned_cols=184 Identities=13% Similarity=0.100 Sum_probs=105.4
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCC---EEEEEecCCCCCC--CChhHH--------hhccccCC------cChH
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFN---GIYAIPNIRGGGE--LGEDWH--------NAGRLLKK------QNCF 616 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~RG~g~--~G~~~~--------~~g~~~~~------~~~~ 616 (783)
+.||++||..+.... |... ...|.+.| +.|+.+++++.|. +-..+. +.+...+. ....
T Consensus 5 ~pvv~iHG~~~~~~~--~~~~-~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 5 APVIMVPGSSASQNR--FDSL-ITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp CCEEEECCCGGGHHH--HHHH-HHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCEEEECCCCCCHHH--HHHH-HHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 457779997765543 4433 34555556 5677777665332 100110 00111111 1124
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC-----CCceeEEEEcCCcchhhhcccccccccchhhhCCC
Q psy2521 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR-----PELYGAALILVGALDMLRFNKFTIAYYSESEFGSP 691 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-----p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p 691 (783)
+++.++++.|.++. ..+++.++||||||+++...+.++ |+..+.+|...+..+-.... ..
T Consensus 82 ~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-------------~~ 146 (250)
T 3lp5_A 82 VWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-------------TT 146 (250)
T ss_dssp HHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-------------SS
T ss_pred HHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-------------cc
Confidence 67778888887653 346899999999999999988876 56778887776654432210 01
Q ss_pred CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecC----CCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC--C
Q psy2521 692 NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGD----HDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ--D 765 (783)
Q Consensus 692 ~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~----~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~--~ 765 (783)
.....++.|....+ .+. ...| +|+++|+ .|..||+..++.+...++.. ........+. +
T Consensus 147 ~~~~~~~~l~~~~~--~lp-----~~vp-vl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~-------~~~~~~~~v~g~~ 211 (250)
T 3lp5_A 147 AKTSMFKELYRYRT--GLP-----ESLT-VYSIAGTENYTSDGTVPYNSVNYGKYIFQDQ-------VKHFTEITVTGAN 211 (250)
T ss_dssp CCCHHHHHHHHTGG--GSC-----TTCE-EEEEECCCCCCTTTBCCHHHHTTHHHHHTTT-------SSEEEEEECTTTT
T ss_pred ccCHHHHHHHhccc--cCC-----CCce-EEEEEecCCCCCCceeeHHHHHHHHHHhccc-------ccceEEEEEeCCC
Confidence 11123333432211 111 1344 9999999 89999988777666666543 2334334444 5
Q ss_pred CCccCCc
Q psy2521 766 AGHGQGK 772 (783)
Q Consensus 766 ~gHg~~~ 772 (783)
++|.+-.
T Consensus 212 a~H~~l~ 218 (250)
T 3lp5_A 212 TAHSDLP 218 (250)
T ss_dssp BSSCCHH
T ss_pred Cchhcch
Confidence 7798743
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.65 E-value=2.4e-06 Score=95.73 Aligned_cols=185 Identities=8% Similarity=0.048 Sum_probs=98.3
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC----eeEEEEEEecCCcEEEE
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR----SLGLHSEVTDCGRYLLV 333 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~----~~~~~~~~SpDGk~l~~ 333 (783)
..++|||||+.|+-...+ ..|.+++..+ ++..-..+. .-...++|||||++|+.
T Consensus 89 ~~vawSPdG~~LAs~s~d----------------g~V~iwd~~~------~l~~l~~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNN----------------GNVSVFKDNK------MLTNLDSKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp EEEEECSSSSCEEEEETT----------------SCEEEEETTE------EEEECCCSSCSTTTCEEEEEECSSSSCEEE
T ss_pred EEEEECCCCCEEEEEeCC----------------CcEEEEeCCc------eeeeccCCCccccccEEEEEEcCCCCEEEE
Confidence 578899999988876632 2355666322 222211111 12468999999999987
Q ss_pred EEecCCCCcEEEEEECCCCCCCcccCCCCceeee---cCccc-eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC
Q psy2521 334 STSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDH-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK 408 (783)
Q Consensus 334 ~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~~~~~-~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~ 408 (783)
... ...|.++|+.++.....+ -.....+. .+... -.. .|+||| ++..+. ...+..+++++....
T Consensus 147 gs~----DGtVkIWd~~~~~l~~~~-~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~----D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 147 GNE----DGELQFFSIRKNSENTPE-FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS----NNSVFSMTVSASSHQ 215 (588)
T ss_dssp EET----TSEEEEEECCCCTTTCCC-CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----TCCEEEECCCSSSSC
T ss_pred EcC----CCEEEEEECCCCcccccc-ceeeeeeecccccccccEEEEEEcCCc--EEEEeC----CCeEEEEECCCCccc
Confidence 543 368999999874110000 00012221 11111 222 599998 443333 234888888765421
Q ss_pred -CcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec-CCCeEEEeeec--cccccEEEEEE
Q psy2521 409 -NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHISG--RRKYNEVFYGF 482 (783)
Q Consensus 409 -~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-~~~g~v~~~s~--~~d~~~l~~~~ 482 (783)
.++.+.+.....+ ..+.+. |+.|+... + ..|.+||+.+++. ..+. .....+..+.. ++++..+..++
T Consensus 216 ~~~~tL~~~h~~~V-~svaFs-g~~LASa~--~--~tIkLWd~~~~~~-~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 216 PVSRMIQNASRRKI-TDLKIV-DYKVVLTC--P--GYVHKIDLKNYSI-SSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CCEEEEECCCSSCC-CCEEEE-TTEEEEEC--S--SEEEEEETTTTEE-EEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred cceeeecccccCcE-EEEEEE-CCEEEEEe--C--CeEEEEECCCCeE-EEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 1334432222333 334444 46665543 3 5899999965554 2333 22344445555 67765665544
|
| >2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-08 Score=102.60 Aligned_cols=91 Identities=15% Similarity=0.188 Sum_probs=62.5
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc-CC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK-KY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-~~ 631 (783)
++.|.||++||..+.+. .|.. ....|.+ +|.|+.+|.||.|.... ...+|+.+.++.+++. +.
T Consensus 11 ~~~~~lv~lhg~g~~~~--~~~~-~~~~L~~-~~~vi~~Dl~GhG~S~~------------~~~~~~~~~~~~~~~~l~~ 74 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA--SFRP-LHAFLQG-ECEMLAAEPPGHGTNQT------------SAIEDLEELTDLYKQELNL 74 (242)
T ss_dssp TCCCEEESSCCCCHHHH--HHHH-HHHHHCC-SCCCEEEECCSSCCSCC------------CTTTHHHHHHHHTTTTCCC
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHhCCC-CeEEEEEeCCCCCCCCC------------CCcCCHHHHHHHHHHHHHh
Confidence 45678999999876653 2443 3355654 89999999999654321 1234677777766543 22
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhc------CCCc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQ------RPEL 659 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~------~p~l 659 (783)
...+++.++||||||.++..++.+ +|+.
T Consensus 75 ~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~ 108 (242)
T 2k2q_B 75 RPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQA 108 (242)
T ss_dssp CCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCS
T ss_pred hcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCE
Confidence 223689999999999999998875 6775
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.1e-05 Score=88.37 Aligned_cols=280 Identities=14% Similarity=0.131 Sum_probs=146.6
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEec-----CCCceEE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDWNT 236 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~-----~G~d~~~ 236 (783)
.|-+++.++|..-.........+++.+..+.+..--+.. |.. - ++.+||||++|..+... .|.....
T Consensus 79 ~p~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v------G~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 79 APAPDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG------GFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp CCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE------CSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC------CCC-C-ceEECCCCCEEEEEeccccccccCCCCCE
Confidence 555677776655432111114566655433221111111 111 2 68999999988766531 1223357
Q ss_pred EEEEECCCCcccccc-cc-------ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCcee
Q psy2521 237 LHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP 308 (783)
Q Consensus 237 i~v~Dl~tg~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~ 308 (783)
|.++|+.+++.+... +. +....++.++|||+++|.+... ....|.++++.+.....
T Consensus 151 VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~--------------~~~~VsVID~~t~kvv~-- 214 (426)
T 3c75_H 151 VEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS--------------PAPAVGVVDLEGKTFDR-- 214 (426)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS--------------SSCEEEEEETTTTEEEE--
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC--------------CCCeEEEEECCCCeEEE--
Confidence 999999999875422 22 1223578999999998877621 12357777776542111
Q ss_pred EEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEE----EECCCCCCCcccCCCCceeeecCccceeEEEEe
Q psy2521 309 VVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHY----FDLHSLPDGKISGKFPLKTVIPGMDHHHEIIAN 379 (783)
Q Consensus 309 v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~----~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~ 379 (783)
....+..... ...+..++||+.+++.. .. . ..+.. ++... .++. ....+++
T Consensus 215 ~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-~~-~-~v~~~~~~~~~v~~------------~p~~-----~~~~~~~ 274 (426)
T 3c75_H 215 MLDVPDCYHIFPASPTVFYMNCRDGSLARVDF-AD-G-ETKVTNTEVFHTED------------ELLI-----NHPAFSL 274 (426)
T ss_dssp EEECCSEEEEEEEETTEEEEEETTSSEEEEEC-CT-T-CCEEEECCCCSCTT------------SCBC-----SCCEECT
T ss_pred EEEcCCceeeccCCCcEEEEEcCCCCEEEEEC-CC-C-cEEEEeeeeeccCC------------Ccee-----eEeeecC
Confidence 1111110000 01134556666555443 11 1 11111 01100 0000 0113688
Q ss_pred eCCEEEEEECCCCCCceEEEEcCCCCCC---CCcEEe---------ecCCCCceEEEEEEeeCCEEEEEEec-------C
Q psy2521 380 NGPELIVKTTKNAPKGKVVTINLNNPCE---KNWKTL---------IPEDENRTLDVVAAVANNKLIVHYIQ-------N 440 (783)
Q Consensus 380 dg~~l~~~t~~~~~~~~L~~~d~~~~~~---~~~~~l---------i~~~~~~~l~~~~~~~g~~l~~~~~~-------~ 440 (783)
+++.+++.+.. .+|+.+|+.+... ..|... .|.+ ...+ ....+++++|+.... .
T Consensus 275 dg~~~~~~s~~----g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g-~~~v--a~s~dg~rlyVa~~~~~~gthk~ 347 (426)
T 3c75_H 275 RSGRLVWPTYT----GKIFQADLTAEGATFRAPIEALTEAERADDWRPGG-WQQT--AYHRQSDRIYLLVDQRDEWKHKA 347 (426)
T ss_dssp TTCEEEEEBTT----SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS-SSCE--EEEGGGTEEEEEEEECCTTCTTS
T ss_pred CCCEEEEEeCC----CcEEEEeccCCceEEeeeeeeccccccccccccCC-ceee--EEcCCCCEEEEEecccccccccC
Confidence 99999987642 3699999865431 011100 0111 1111 233455777776542 1
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeecccccc-EEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYN-EVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~-~l~~~~ss~~~P~~vy~~d~ 496 (783)
+...|.++|+++++.+..|+.+. ...++..++|++ .+|... .. -..+..+|+
T Consensus 348 ~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n-~~--s~~VsVID~ 400 (426)
T 3c75_H 348 ASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALS-AG--TQTLHIYDA 400 (426)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEE-TT--TTEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEc-CC--CCeEEEEEC
Confidence 34689999999999888887652 244667788888 555433 21 358999999
|
| >3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.8e-07 Score=99.13 Aligned_cols=186 Identities=8% Similarity=-0.103 Sum_probs=99.6
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHH-HHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAA-EYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~-~~l~~~~~ 631 (783)
+..|.||++||.........|.. +...|. .||.|+.+|+||.|... .....++++.+.+ +.+.+.
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~-~~~~L~-~~~~v~~~d~~G~G~~~----------~~~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSR-LAEELD-AGRRVSALVPPGFHGGQ----------ALPATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHH-HHHHHC-TTSEEEEEECTTSSTTC----------CEESSHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEECCCCcCCCHHHHHH-HHHHhC-CCceEEEeeCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--
Confidence 55689999999422122223443 345564 69999999999954311 1112344444332 222222
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcC---CCceeEEEEcCCcchhhh--c-ccc--cccccch---hhhCCCC-CHHHHHH
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGALDMLR--F-NKF--TIAYYSE---SEFGSPN-NKTHFHN 699 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~---p~lf~a~i~~~~~~d~~~--~-~~~--~~~~~~~---~~~g~p~-~~~~~~~ 699 (783)
....++.|+|||+||.++..++.+. |+..+++|...+...... . ..+ ....... ..+.... ....+..
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 224 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITA 224 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHH
Confidence 1225899999999999999998877 887888887655331111 0 000 0000000 0011111 0111111
Q ss_pred H----HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 700 L----LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 700 ~----~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
+ ..+.-+ ... .+.+| +|+++|.. +.+++.....+.+.+.. ...+.++++ ||..
T Consensus 225 ~~~~~~~~~~~-~~~----~i~~P-vLli~g~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~g-~H~~ 281 (319)
T 3lcr_A 225 QVWCLELLRGW-RPE----GLTAP-TLYVRPAQ-PLVEQEKPEWRGDVLAA----------MGQVVEAPG-DHFT 281 (319)
T ss_dssp HHHHHHHTTTC-CCC----CCSSC-EEEEEESS-CSSSCCCTHHHHHHHHT----------CSEEEEESS-CTTG
T ss_pred HHHHHHHHhcC-CCC----CcCCC-EEEEEeCC-CCCCcccchhhhhcCCC----------CceEEEeCC-CcHH
Confidence 1 111111 112 26778 99999987 67777777777666543 246677776 5654
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.63 E-value=3.6e-07 Score=98.54 Aligned_cols=243 Identities=9% Similarity=-0.032 Sum_probs=129.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC--ccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--KDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg--~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+..++|||||++||.+.. ...|++||+.++ +.+.. .........++|+||++.|+....+
T Consensus 14 v~~~~~s~~g~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------------ 76 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTA-----TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------------ 76 (377)
T ss_dssp CSCCEECSSSSEEECCCS-----SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------------
T ss_pred EEEEEECCCCCEEEEecC-----CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------------
Confidence 567899999999886432 256899999887 33321 1122233578999999988766622
Q ss_pred ccCCceEEEEEcCCCC-CCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 288 AHMGQKIYYHVLGTEQ-DKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~-~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
..|+++++.+.. ......+.. .......+.|+|||++|+....+ ..|.++|+.++..- .....+
T Consensus 77 ----~~v~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~-----~~~~~~ 141 (377)
T 3dwl_C 77 ----RNAYVYEKRPDGTWKQTLVLLR--LNRAATFVRWSPNEDKFAVGSGA----RVISVCYFEQENDW-----WVSKHL 141 (377)
T ss_dssp ----SSEEEC------CCCCEEECCC--CSSCEEEEECCTTSSCCEEEESS----SCEEECCC-----C-----CCCEEE
T ss_pred ----CeEEEEEcCCCCceeeeeEecc--cCCceEEEEECCCCCEEEEEecC----CeEEEEEECCcccc-----eeeeEe
Confidence 247777776653 111222222 22345688999999998865432 57888888773100 001222
Q ss_pred ecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC------------CcEEeecC-CCCceEEEEEEeeCC
Q psy2521 367 IPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK------------NWKTLIPE-DENRTLDVVAAVANN 431 (783)
Q Consensus 367 ~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~------------~~~~li~~-~~~~~l~~~~~~~g~ 431 (783)
........ . .|+|+++.|+..+.. +.|..+|+...... ....++.. .....+..+.+..++
T Consensus 142 ~~~h~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSG 217 (377)
T ss_dssp CSSCCSCEEEEEECTTSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTS
T ss_pred ecccCCCeEEEEEcCCCCEEEEEeCC----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCC
Confidence 22122222 2 589998877765543 34666665421100 00111111 112223344443335
Q ss_pred EEEEEEecCCeeEEEEEECCCCce----eeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKR----LHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~----~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++....++ .|.+||+.+++. +..+....+.+..+.+++++..++ +. +. ..+..++.
T Consensus 218 ~~l~~~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~-~~---~~~~~~~~ 279 (377)
T 3dwl_C 218 NALAYAGHDS--SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVA-AG-YN---YSPILLQG 279 (377)
T ss_dssp SCEEEEETTT--EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE-EE-SS---SSEEEECC
T ss_pred CEEEEEeCCC--cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE-EE-cC---CcEEEEEe
Confidence 5555555554 688889877765 455555555677777888875443 22 21 23556666
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.62 E-value=1.3e-06 Score=97.89 Aligned_cols=192 Identities=7% Similarity=0.065 Sum_probs=110.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-cccccc-----ccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNV-----KFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~-----~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
.+..++|||||++||-+... ..+++||.++ .+. .. +.. ....++|||||+.|+....
T Consensus 87 ~V~~vawSPdG~~LAs~s~d-----g~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~--------- 149 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNN-----GNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE--------- 149 (588)
T ss_dssp CEEEEEECSSSSCEEEEETT-----SCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET---------
T ss_pred cEEEEEECCCCCEEEEEeCC-----CcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC---------
Confidence 47889999999999966542 3488999644 111 11 111 1357999999998887762
Q ss_pred CcccccCCceEEEEEcCCCCCCce---eEEec----CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDI---PVVEF----PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 356 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~---~v~~~----~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~ 356 (783)
...|.+|++.++.-... .+..- ..+..+...++||||| ++..+. .+.++++|+.++...
T Consensus 150 -------DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~----D~tVrlWd~~~~~~~- 215 (588)
T 2j04_A 150 -------DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS----NNSVFSMTVSASSHQ- 215 (588)
T ss_dssp -------TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----TCCEEEECCCSSSSC-
T ss_pred -------CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC----CCeEEEEECCCCccc-
Confidence 23678888876431111 12221 2233477899999999 443322 368899999873100
Q ss_pred ccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE--eeCCE
Q psy2521 357 ISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA--VANNK 432 (783)
Q Consensus 357 l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~--~~g~~ 432 (783)
..+..+..+..... . .|+ |+.|+..+ ...|..+|+.++. ...+.. +....+..+.+ ..++.
T Consensus 216 ----~~~~tL~~~h~~~V~svaFs--g~~LASa~-----~~tIkLWd~~~~~---~~~~~~-gh~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 216 ----PVSRMIQNASRRKITDLKIV--DYKVVLTC-----PGYVHKIDLKNYS---ISSLKT-GSLENFHIIPLNHEKEST 280 (588)
T ss_dssp ----CCEEEEECCCSSCCCCEEEE--TTEEEEEC-----SSEEEEEETTTTE---EEEEEC-SCCSCCCEEEETTCSSCE
T ss_pred ----cceeeecccccCcEEEEEEE--CCEEEEEe-----CCeEEEEECCCCe---EEEEEc-CCCceEEEEEeeeCCCCC
Confidence 01122322222222 2 476 56666443 1468889987654 222221 22344445555 44456
Q ss_pred EEEEEecCCeeEEEEE
Q psy2521 433 LIVHYIQNVRSVMDLH 448 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~ 448 (783)
.++...++|. +|+..
T Consensus 281 ~La~a~edG~-klw~~ 295 (588)
T 2j04_A 281 ILLMSNKTSY-KVLLE 295 (588)
T ss_dssp EEEECSSCEE-EEEES
T ss_pred EEEEEcCCCC-EEEee
Confidence 7777777776 66654
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=98.61 E-value=2.3e-05 Score=82.29 Aligned_cols=119 Identities=12% Similarity=0.188 Sum_probs=76.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc---cccc--cccccCeeEEee--CCCEEEEEEeecCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY---PEVL--KNVKFPSISWTH--DHKGFFYNQYCDINGTA 281 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~---~~~~--~~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~ 281 (783)
-.+..++|||||++||.+... ..|++||+.++... ..++ .......++|+| |++.|+....
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~------- 79 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY------- 79 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET-------
T ss_pred cceeEEEEcCCCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC-------
Confidence 347889999999998876432 47999999876422 1111 222336789999 6887776652
Q ss_pred CCCcccccCCceEEEEEcCCCCCCc-----eeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d-----~~v~~~~~~~~~~~~~~~SpD--Gk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...|.++++.+..... ..+............+.|+|+ +++|+.... ...|.++|+.++
T Consensus 80 ---------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~v~iwd~~~~ 144 (351)
T 3f3f_A 80 ---------DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN----DGILRLYDALEP 144 (351)
T ss_dssp ---------TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET----TCEEEEEECSST
T ss_pred ---------CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC----CCcEEEecCCCh
Confidence 2257777776543211 122222222334568899999 998876543 258999998774
|
| >3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=2.5e-07 Score=101.41 Aligned_cols=120 Identities=14% Similarity=0.035 Sum_probs=83.6
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHc------CCEEEEEecCCCCCCCChhHHhhc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRH------FNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
.+|.+|......+++ ...|.||++||.++.... |.... ..|.+ .||.|+++|+||.|.... .
T Consensus 92 i~g~~i~~~~~~~~~----~~~~pllllHG~~~s~~~--~~~~~-~~L~~~~~~~~~gf~vv~~DlpG~G~S~~---~-- 159 (408)
T 3g02_A 92 IEGLTIHFAALFSER----EDAVPIALLHGWPGSFVE--FYPIL-QLFREEYTPETLPFHLVVPSLPGYTFSSG---P-- 159 (408)
T ss_dssp ETTEEEEEEEECCSC----TTCEEEEEECCSSCCGGG--GHHHH-HHHHHHCCTTTCCEEEEEECCTTSTTSCC---S--
T ss_pred ECCEEEEEEEecCCC----CCCCeEEEECCCCCcHHH--HHHHH-HHHhcccccccCceEEEEECCCCCCCCCC---C--
Confidence 389999887765432 345789999999877654 44444 34443 599999999999543321 1
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCC-cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPK-YITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~-ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.......++++...+..|++. ...+ ++.++|+|+||.++..++.++|++.+.++...+
T Consensus 160 -~~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~ 218 (408)
T 3g02_A 160 -PLDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCN 218 (408)
T ss_dssp -CSSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred -CCCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCC
Confidence 112234577777777777665 2233 899999999999999999999987766665544
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.61 E-value=7e-05 Score=77.92 Aligned_cols=244 Identities=8% Similarity=-0.006 Sum_probs=140.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..+..++|||||++||-+.. ...|++||+++++.+..... .......++++++.++....
T Consensus 68 ~~V~~v~~~~~~~~l~sgs~-----Dg~v~iw~~~~~~~~~~~~~-h~~~~~~~~~~~~~l~s~~~-------------- 127 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGTS-----SAEVQLWDVQQQKRLRNMTS-HSARVGSLSWNSYILSSGSR-------------- 127 (318)
T ss_dssp CCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEEC-CSSCEEEEEEETTEEEEEET--------------
T ss_pred CeEEEEEECCCCCEEEEEEC-----CCcEEEeecCCceeEEEecC-ccceEEEeecCCCEEEEEec--------------
Confidence 34788999999999986543 25799999999987643222 22235567778876654441
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+..+...+... ....+... ........++++|++|+.... ...|.++|+.++... ........
T Consensus 128 --~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~~~~-----~~~~~~~~ 193 (318)
T 4ggc_A 128 --SGHIHHHDVRVAEH-HVATLSGH--SQEVCGLRWAPDGRHLASGGN----DNLVNVWPSAPGEGG-----WVPLQTFT 193 (318)
T ss_dssp --TSEEEEEETTSSSC-EEEEEECC--SSCEEEEEECTTSSEEEEEET----TSCEEEEESSCBTTB-----SCCSEEEC
T ss_pred --CCceEeeecCCCce-eEEEEcCc--cCceEEEEEcCCCCEEEEEec----CcceeEEECCCCccc-----ccceeeec
Confidence 12345555544322 22222222 223457789999998875432 257889999874211 01111111
Q ss_pred CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
....... .+.+++..++..... .....|..++..... ........ ..+....+...++.+++... .....|+
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~---~~~~~~~~-~~v~~~~~~~~~~~~~~~sg-~~d~~i~ 267 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGA---CLSAVDAH-SQVCSILWSPHYKELISGHG-FAQNQLV 267 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCC---EEEEEECS-SCEEEEEEETTTTEEEEEEC-TTTCCEE
T ss_pred ccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEeccccc---ccccccce-eeeeeeeecccccceEEEEE-cCCCEEE
Confidence 1122222 467777666554332 223456677776543 22222222 33333444455456555432 2234699
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+||+.+|+.+..+....+.|..+.+++++..++ +.+. -.+|..+|+
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s~---D~~v~iWd~ 313 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAA---DETLRLWRC 313 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEET---TTEEEEECC
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEec---CCeEEEEEC
Confidence 999988998888877667788888889887554 3332 246888887
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=98.60 E-value=1.1e-05 Score=87.97 Aligned_cols=241 Identities=10% Similarity=0.023 Sum_probs=134.9
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-c--ccc--cccccCeeEEee-CCCEEEEEEeecCCCCCCCCcc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-P--EVL--KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~--~~~--~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.++++|+...+++....+ ..|+|+|+...... . ..+ .......++|+| |++.|+....
T Consensus 39 ~~~~~~~~~~~~~~~~~~----g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~------------ 102 (402)
T 2aq5_A 39 FCAVNPKFMALICEASGG----GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE------------ 102 (402)
T ss_dssp SEEECSSEEEEEBCCSSS----CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET------------
T ss_pred cEEECCCeEEEEEEEcCC----CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC------------
Confidence 367777775554433322 45999998653221 1 111 122335899999 7776665542
Q ss_pred cccCCceEEEEEcCCCCC-----CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 287 TAHMGQKIYYHVLGTEQD-----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~-----~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
...|.++++.+... +....+.... .....+.|+|+|+.++++... ...|.++|+.++.
T Consensus 103 ----dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~l~s~~~---dg~i~iwd~~~~~-------- 165 (402)
T 2aq5_A 103 ----DCTVMVWEIPDGGLVLPLREPVITLEGHT--KRVGIVAWHPTAQNVLLSAGC---DNVILVWDVGTGA-------- 165 (402)
T ss_dssp ----TSEEEEEECCTTCCSSCBCSCSEEEECCS--SCEEEEEECSSBTTEEEEEET---TSCEEEEETTTTE--------
T ss_pred ----CCeEEEEEccCCCCccccCCceEEecCCC--CeEEEEEECcCCCCEEEEEcC---CCEEEEEECCCCC--------
Confidence 23688888876532 2223333322 235678999999644444432 2579999998731
Q ss_pred Cceeee-cCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe-ecCCCCceEEEEEEeeCCEEEEEE
Q psy2521 362 PLKTVI-PGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 362 ~~~~l~-~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l-i~~~~~~~l~~~~~~~g~~l~~~~ 437 (783)
....+. ....... . .|+|+|+.|+..+. .+.|..+|+.++. ....+ ..+.........+..+ +.+++..
T Consensus 166 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g 238 (402)
T 2aq5_A 166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIEPRKGT--VVAEKDRPHEGTRPVHAVFVSE-GKILTTG 238 (402)
T ss_dssp EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTE--EEEEEECSSCSSSCCEEEECST-TEEEEEE
T ss_pred ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEeCCCCc--eeeeeccCCCCCcceEEEEcCC-CcEEEEe
Confidence 112221 2222222 2 58999988876553 3468899987654 12233 2232122333334444 6666555
Q ss_pred e-cCCeeEEEEEECCCCce-eeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 I-QNVRSVMDLHDLNTGKR-LHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~-~~g~~~l~~~dl~~G~~-~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
. ......|.+||+.+++. +.....+ ...+..+.+++++..++++.+. -..+..||+
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~---dg~i~i~d~ 297 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKG---DSSIRYFEI 297 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETT---CSCEEEEEE
T ss_pred ccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcC---CCeEEEEEe
Confidence 2 23346899999976653 2233333 3345567778888877665432 246888888
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=98.60 E-value=4.1e-06 Score=91.39 Aligned_cols=232 Identities=10% Similarity=0.047 Sum_probs=132.4
Q ss_pred cEEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCcc-------cc-ccccccccCeeEEeeCCCEEEEEEeecCC
Q psy2521 208 TTALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKD-------YP-EVLKNVKFPSISWTHDHKGFFYNQYCDIN 278 (783)
Q Consensus 208 ~~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~-------~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~ 278 (783)
.-.+..++||| |+++||.+... ..|++||+.++.. +. ..........++|+||++.++++...
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--- 152 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--- 152 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET---
T ss_pred CCCEEEEEeCCCCCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC---
Confidence 34588999999 89988866432 4699999998742 21 11122234679999999655555522
Q ss_pred CCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|+++++.+.. ....+...........+.|+|||++|+.... ...|.++|+.++.
T Consensus 153 ------------dg~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~----- 209 (402)
T 2aq5_A 153 ------------DNVILVWDVGTGA--AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVRVIEPRKGT----- 209 (402)
T ss_dssp ------------TSCEEEEETTTTE--EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEEEEETTTTE-----
T ss_pred ------------CCEEEEEECCCCC--ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEEEEeCCCCc-----
Confidence 2358888887642 2223310222334568999999999886543 2689999998731
Q ss_pred CCCCceeeecCccc---eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEE
Q psy2521 359 GKFPLKTVIPGMDH---HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIV 435 (783)
Q Consensus 359 ~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~ 435 (783)
....+...... ....|+++|..|+...+ ......|..+|+.+.... ...........+....+..+++.|++
T Consensus 210 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 210 ---VVAEKDRPHEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLEEP-LSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp ---EEEEEECSSCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCSSC-SEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred ---eeeeeccCCCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCccccCC-ceEEeccCCCceeEEEEcCCCCEEEE
Confidence 11122122221 12258898765554322 223567999998765421 22222122233444445555566666
Q ss_pred EEecCCeeEEEEEECCCCce-eeeecC--CCeEEEeeeccccccE
Q psy2521 436 HYIQNVRSVMDLHDLNTGKR-LHSFPL--DLGQITHISGRRKYNE 477 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~-~~~l~~--~~g~v~~~s~~~d~~~ 477 (783)
....++ .|.+|++.+++. +..+.. ..+.+.++.+++++..
T Consensus 285 ~g~~dg--~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 285 CGKGDS--SIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGL 327 (402)
T ss_dssp EETTCS--CEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGS
T ss_pred EEcCCC--eEEEEEecCCCcceEeecccccCCcccceEEeccccc
Confidence 665554 688888876662 233321 1234445566666644
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.59 E-value=9.4e-06 Score=86.87 Aligned_cols=243 Identities=12% Similarity=0.041 Sum_probs=136.2
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC--ccccc-cccccccCeeEEeeC--CCEEEEEEeecCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--KDYPE-VLKNVKFPSISWTHD--HKGFFYNQYCDINGTADG 283 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg--~~~~~-~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~g 283 (783)
-.+..++|||||++||.+... ..|++||+.++ +.+.. .........++|+|+ ++.|+....
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~--------- 77 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY--------- 77 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---------
T ss_pred ccEEEEEEcCCCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---------
Confidence 347889999999999876532 35889998743 33221 111222357899988 776665552
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD--Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
...|.++++.+........+. ........+.|+|+ |++|+....+ ..|.++|+.++.. .
T Consensus 78 -------dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~d----~~i~v~d~~~~~~------~ 138 (379)
T 3jrp_A 78 -------DGKVLIWKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASSD----GKVSVVEFKENGT------T 138 (379)
T ss_dssp -------TSCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEETT----SEEEEEECCTTSC------C
T ss_pred -------CCEEEEEEcCCCceeEeeeec--CCCcceEEEEeCCCCCCCEEEEecCC----CcEEEEecCCCCc------e
Confidence 225777777654211222222 22234568899999 8888765432 5899999987311 1
Q ss_pred CceeeecCcccee-E-EEEe-------------eCCEEEEEECCCCCCceEEEEcCCCCCCC-CcEEeecCCCCceEEEE
Q psy2521 362 PLKTVIPGMDHHH-E-IIAN-------------NGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDVV 425 (783)
Q Consensus 362 ~~~~l~~~~~~~~-~-~~s~-------------dg~~l~~~t~~~~~~~~L~~~d~~~~~~~-~~~~li~~~~~~~l~~~ 425 (783)
... ......... . .|+| +++.|+..+.. +.|..+|+.++... .....+... ...+..+
T Consensus 139 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~ 212 (379)
T 3jrp_A 139 SPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRDV 212 (379)
T ss_dssp CEE-EEECCTTCEEEEEECCCC----------CTTCEEEEEETT----SCEEEEEEETTTTEEEEEEEECCC-SSCEEEE
T ss_pred eeE-EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEecc-cCcEeEE
Confidence 111 122222222 2 4777 57766655443 35777777654311 011122222 2334444
Q ss_pred EEeeC---CEEEEEEecCCeeEEEEEECCCCc---eeeeecC--CCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 426 AAVAN---NKLIVHYIQNVRSVMDLHDLNTGK---RLHSFPL--DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 426 ~~~~g---~~l~~~~~~~g~~~l~~~dl~~G~---~~~~l~~--~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+ +.++++...++ .|.+||+.+++ ....+.. ..+.+..+.+++++..++.... -..++.||+
T Consensus 213 ~~sp~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----dg~i~iw~~ 285 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG----DNKVTLWKE 285 (379)
T ss_dssp EECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES----SSSEEEEEE
T ss_pred EECCCCCCCCeEEEEeCCC--EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC----CCcEEEEeC
Confidence 44443 56677776665 57788886653 1122222 2456777888898876664432 245777776
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=98.58 E-value=4.9e-05 Score=83.41 Aligned_cols=250 Identities=12% Similarity=0.128 Sum_probs=143.5
Q ss_pred EEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-cc--ccccCeeEEeeCCCEEEEE
Q psy2521 196 VFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK--NVKFPSISWTHDHKGFFYN 272 (783)
Q Consensus 196 ~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~--~~~~~~~~WspDg~~l~y~ 272 (783)
.+||...+..| +.+.-+.||+++ .||.+.+ .+|+|||+.+|+.+... .. ......++|+|||+.|+..
T Consensus 95 ~~l~ap~~~~d--~y~~~l~wS~~n-~lAvgld------~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasg 165 (420)
T 4gga_A 95 RILDAPEIRND--YYLNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVG 165 (420)
T ss_dssp EEEECTTCCCC--TTCBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEE
T ss_pred eEEECCCCccc--ccceeEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEE
Confidence 34565544433 335668999865 7888764 37999999999865432 21 2223689999999988766
Q ss_pred EeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 273 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
..+ ..|.++++.+.. .+.....+.... ..++.|++.|+... ....++++|....
T Consensus 166 s~D----------------g~v~iWd~~~~~----~~~~~~~h~~~v--~~~s~~~~~l~sgs----~d~~i~~~d~~~~ 219 (420)
T 4gga_A 166 TSS----------------AEVQLWDVQQQK----RLRNMTSHSARV--GSLSWNSYILSSGS----RSGHIHHHDVRVA 219 (420)
T ss_dssp ETT----------------SCEEEEETTTTE----EEEEECCCSSCE--EEEEEETTEEEEEE----TTSEEEEEETTSS
T ss_pred ECC----------------CeEEEEEcCCCc----EEEEEeCCCCce--EEEeeCCCEEEEEe----CCCceeEeeeccc
Confidence 622 257788886542 222222222222 24566777766432 2357888887662
Q ss_pred CCCcccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC--CcEEeecCCCCceEEEEEEe
Q psy2521 353 PDGKISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK--NWKTLIPEDENRTLDVVAAV 428 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~--~~~~li~~~~~~~l~~~~~~ 428 (783)
......+ .+..... . .++++|+.++...+. ..+..++...+... .......+. ..+....+.+
T Consensus 220 -------~~~~~~~-~~h~~~~~~~~~~~~g~~l~s~~~D----~~v~i~~~~~~~~~~~~~~~~~~~~-~~V~~~~~~p 286 (420)
T 4gga_A 220 -------EHHVATL-SGHSQEVCGLRWAPDGRHLASGGND----NLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAWCP 286 (420)
T ss_dssp -------SCEEEEE-ECCSSCEEEEEECTTSSEEEEEETT----SCEEEEESSCCSSCSCCSEEECCCS-SCEEEEEECT
T ss_pred -------ceeeEEe-cccccceeeeeecCCCCeeeeeecc----ccceEEeeccccccceeeeeecccC-CceeeeeeCC
Confidence 1111222 2222222 2 588898887765543 34677777654311 122222222 3333333444
Q ss_pred eCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 429 ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 429 ~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+++.........|.+||+.+|+....+.... .+....+.++++.++....+. -..|+.+|+
T Consensus 287 ~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~--d~~I~iwd~ 351 (420)
T 4gga_A 287 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFA--QNQLVIWKY 351 (420)
T ss_dssp TCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTT--TCCEEEEET
T ss_pred CcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecC--CCEEEEEEC
Confidence 44556655443333579999998888777666543 344556677787777554322 257889998
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.58 E-value=8.7e-06 Score=86.44 Aligned_cols=242 Identities=8% Similarity=0.038 Sum_probs=137.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--cccccCeeEEeeC---CCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHD---HKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--~~~~~~~~~WspD---g~~l~y~~~~~~~~~~~g~ 284 (783)
.+..++|||||++++.+.+... ....|++||+.+++...... .......++|+|+ |+.|+....
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~-~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---------- 88 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFAR-GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF---------- 88 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--C-CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET----------
T ss_pred ceEEEEEcCCCceEEEecCccC-CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC----------
Confidence 4788999999988876654311 13689999999987643221 2223368899999 576665552
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEE------EEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS------EVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS 358 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~------~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~ 358 (783)
...|.++++.+... ....+..... ....+ .|+|||++|+.... ...|.++|+.++.
T Consensus 89 ------dg~i~iwd~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~----d~~i~vwd~~~~~----- 150 (357)
T 3i2n_A 89 ------GGNLHIWNLEAPEM-PVYSVKGHKE--IINAIDGIGGLGIGEGAPEIVTGSR----DGTVKVWDPRQKD----- 150 (357)
T ss_dssp ------TSCEEEECTTSCSS-CSEEECCCSS--CEEEEEEESGGGCC-CCCEEEEEET----TSCEEEECTTSCS-----
T ss_pred ------CCeEEEEeCCCCCc-cEEEEEeccc--ceEEEeeccccccCCCccEEEEEeC----CCeEEEEeCCCCC-----
Confidence 23578888876541 2233332222 23344 45789999875433 2578999998731
Q ss_pred CCCCceeeecCcc----ceeE-E----EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee
Q psy2521 359 GKFPLKTVIPGMD----HHHE-I----IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA 429 (783)
Q Consensus 359 ~~~~~~~l~~~~~----~~~~-~----~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~ 429 (783)
.+...+..... .... . |+++++.|+..+. .+.|..+|+.++. ........ . .+..+.+..
T Consensus 151 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~---~~~~~~~~-~-~v~~~~~~~ 219 (357)
T 3i2n_A 151 --DPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNMA---LRWETNIK-N-GVCSLEFDR 219 (357)
T ss_dssp --SCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTTE---EEEEEECS-S-CEEEEEESC
T ss_pred --CcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccCc---eeeecCCC-C-ceEEEEcCC
Confidence 11121211111 1111 1 5688887776544 2468899987754 22222222 2 334444442
Q ss_pred ---CCEEEEEEecCCeeEEEEEECCCCceeeeec-----CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 430 ---NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-----LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 430 ---g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-----~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++..++....++ .|.+||+.+++....+. ...+.+..+.+++++..++++.+.- ..+..+|+
T Consensus 220 ~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~ 289 (357)
T 3i2n_A 220 KDISMNKLVATSLEG--KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA---GGLHLWKY 289 (357)
T ss_dssp SSSSCCEEEEEESTT--EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---SEEEEEEE
T ss_pred CCCCCCEEEEECCCC--eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC---CcEEEeec
Confidence 244555555554 67888886554433332 3355677788888877555554432 46888887
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.57 E-value=4.5e-06 Score=89.22 Aligned_cols=199 Identities=9% Similarity=0.058 Sum_probs=110.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cc---cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL---KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+..++|||||++||-+... .+|++||++++..... .. .......++|+|||+.|+....+
T Consensus 19 v~~l~~sp~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D----------- 82 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD----------- 82 (345)
T ss_dssp EEEEEECTTSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred EEEEEECCCCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----------
Confidence 5678999999999866432 4699999988753211 11 11223578999999988766632
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
..+.++++.+...+....+.. +......+.|+|||++|+....+ ..|+++|+.++.. ......
T Consensus 83 -----~~v~iw~~~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~~~------~~~~~~ 145 (345)
T 3fm0_A 83 -----ATTCIWKKNQDDFECVTTLEG--HENEVKSVAWAPSGNLLATCSRD----KSVWVWEVDEEDE------YECVSV 145 (345)
T ss_dssp -----SCEEEEEECCC-EEEEEEECC--CSSCEEEEEECTTSSEEEEEETT----SCEEEEEECTTSC------EEEEEE
T ss_pred -----CcEEEEEccCCCeEEEEEccC--CCCCceEEEEeCCCCEEEEEECC----CeEEEEECCCCCC------eEEEEE
Confidence 245666665432221222222 22345689999999998754332 5788888876310 011112
Q ss_pred ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 367 IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 367 ~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
..+...... .|+|+++.|+..+.. ..|..+++..+.......+..+ ...+..+.+..++.++++...|+.
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~sp~g~~l~s~s~D~~-- 217 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYD----DTVKLYREEEDDWVCCATLEGH--ESTVWSLAFDPSGQRLASCSDDRT-- 217 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETT----SCEEEEEEETTEEEEEEEECCC--SSCEEEEEECTTSSEEEEEETTSC--
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCC----CcEEEEEecCCCEEEEEEecCC--CCceEEEEECCCCCEEEEEeCCCe--
Confidence 222222222 589999877765543 2355566544320001122222 233444444433566667777764
Q ss_pred EEEEEC
Q psy2521 445 MDLHDL 450 (783)
Q Consensus 445 l~~~dl 450 (783)
|.+|+.
T Consensus 218 v~iW~~ 223 (345)
T 3fm0_A 218 VRIWRQ 223 (345)
T ss_dssp EEEEEE
T ss_pred EEEecc
Confidence 555553
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.57 E-value=2e-05 Score=84.48 Aligned_cols=222 Identities=9% Similarity=0.028 Sum_probs=130.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-----cc--ccccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-----EV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-----~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
+...+|||||++||.... ...+.++++..+.... .. ........+.|+||++.|+-...
T Consensus 109 v~~~~~sp~g~~lasg~~-----d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~--------- 174 (354)
T 2pbi_B 109 VMACAYAPSGCAIACGGL-----DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG--------- 174 (354)
T ss_dssp CCEEEECTTSSEEEEEST-----TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET---------
T ss_pred EEEEEECCCCCEEEEeeC-----CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC---------
Confidence 567899999999886422 2568889886542110 01 11112357899999998876552
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec--CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD--CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp--DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
...|.++++.+.. .+..+..... ....+.++| +|++|+.... ...|.++|+.++.
T Consensus 175 -------D~~v~lwd~~~~~--~~~~~~~h~~--~v~~~~~~~~~~g~~l~sgs~----Dg~v~~wd~~~~~-------- 231 (354)
T 2pbi_B 175 -------DGTCALWDVESGQ--LLQSFHGHGA--DVLCLDLAPSETGNTFVSGGC----DKKAMVWDMRSGQ-------- 231 (354)
T ss_dssp -------TSEEEEEETTTCC--EEEEEECCSS--CEEEEEECCCSSCCEEEEEET----TSCEEEEETTTCC--------
T ss_pred -------CCcEEEEeCCCCe--EEEEEcCCCC--CeEEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCc--------
Confidence 2368888887653 2223333222 234556665 6777764432 2579999998741
Q ss_pred CceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEEe
Q psy2521 362 PLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 362 ~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~~ 438 (783)
....+........ .|+|+|+.|+..+.. ..|..+|+.... ...+.... ....+..+.+..++.+++...
T Consensus 232 -~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~v~lwd~~~~~---~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 232 -CVQAFETHESDVNSVRYYPSGDAFASGSDD----ATCRLYDLRADR---EVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTE---EEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred -EEEEecCCCCCeEEEEEeCCCCEEEEEeCC----CeEEEEECCCCc---EEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 1122222222222 488998877654432 347778886543 12222221 111233343333355666666
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
.++ .|.+||+.+|+.+..+....+.|..+.++|++..++
T Consensus 304 ~d~--~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 304 NDY--TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp TTS--CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred CCC--cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 554 688999988887777765566788888888887554
|
| >1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=5.7e-08 Score=107.73 Aligned_cols=114 Identities=11% Similarity=0.000 Sum_probs=81.1
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|+||++||..+.. ...|...+ ..++++.||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~---~~~~~-~~~~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTE---YTQAS-YNTRVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSC---HHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCc---hhHhH-hhHHHHHHHHHHHHHHHHHhc
Confidence 35579999999987655 23355433 34454449999999999965433 11111 111233567788888887543
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.++.+++.|+|||+||.+++.++.++|+.+++++...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4567899999999999999999999999999999877643
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=98.56 E-value=1.2e-05 Score=85.93 Aligned_cols=206 Identities=11% Similarity=0.055 Sum_probs=114.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc---cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|+|||++|+.+.. + ..|++||+++++.... .........+.|+||++.|+....+
T Consensus 54 ~v~~~~~~~~~~~l~~~~~-d----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------- 117 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT-D----RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS----------- 117 (372)
T ss_dssp CEEEEEEETTTTEEEEEET-T----SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred cccEEEEeCCCCEEEEEcC-C----CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----------
Confidence 4788999999999987653 2 3599999988863321 1122233578999999988877622
Q ss_pred cccCCceEEEEEcCCCCCCcee-EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc--------
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIP-VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI-------- 357 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~-v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l-------- 357 (783)
..|+++++.+....... ....+. ......+.|+|||++|+.... ...|+++|+........
T Consensus 118 -----~~v~i~d~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~~~ 187 (372)
T 1k8k_C 118 -----RVISICYFEQENDWWVCKHIKKPI-RSTVLSLDWHPNSVLLAAGSC----DFKCRIFSAYIKEVEERPAPTPWGS 187 (372)
T ss_dssp -----SSEEEEEEETTTTEEEEEEECTTC-CSCEEEEEECTTSSEEEEEET----TSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred -----CEEEEEEecCCCcceeeeeeeccc-CCCeeEEEEcCCCCEEEEEcC----CCCEEEEEccccccccccccccccc
Confidence 24666666554321111 121221 224568899999999876533 25788888643100000
Q ss_pred -cCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 358 -SGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 358 -~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
.........+........ .|+|+|+.|+..+. .+.|..+|+.++. ....+... ...+..+.+..++.++
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~---~~~~~~~~-~~~v~~~~~~~~~~~l 259 (372)
T 1k8k_C 188 KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKM---AVATLASE-TLPLLAVTFITESSLV 259 (372)
T ss_dssp CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEEGGGTT---EEEEEECS-SCCEEEEEEEETTEEE
T ss_pred ccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC----CCEEEEEECCCCc---eeEEEccC-CCCeEEEEEecCCCEE
Confidence 000011111222222222 58899987776553 3468888987654 22223322 2234444444446666
Q ss_pred EEEecCCeeEEEEEECCC
Q psy2521 435 VHYIQNVRSVMDLHDLNT 452 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~ 452 (783)
+.. .++ .|.+|++.+
T Consensus 260 ~~~-~d~--~i~i~~~~~ 274 (372)
T 1k8k_C 260 AAG-HDC--FPVLFTYDS 274 (372)
T ss_dssp EEE-TTS--SCEEEEEET
T ss_pred EEE-eCC--eEEEEEccC
Confidence 665 554 466666644
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.55 E-value=4.3e-06 Score=87.72 Aligned_cols=239 Identities=9% Similarity=-0.004 Sum_probs=130.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++.|+|||++|.|+-..+| .|+.++. +|+............+++|++||+ |+.... .
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~----~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~-l~v~~~---------------~ 105 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGR----RVLGWRE-DGTVDVLLDATAFTNGNAVDAQQR-LVHCEH---------------G 105 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTT----EEEEEET-TSCEEEEEESCSCEEEEEECTTSC-EEEEET---------------T
T ss_pred ccCCeEeCCCCEEEEEECCCC----EEEEEeC-CCCEEEEeCCCCccceeeECCCCC-EEEEEC---------------C
Confidence 457999999998888754333 5888898 454332222222235789999997 554441 1
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCe--eEEEEEEecCCcEEEEEEec-C-------------CCCcEEEEEECCCCCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRS--LGLHSEVTDCGRYLLVSTSN-N-------------TQGSDLHYFDLHSLPD 354 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~--~~~~~~~SpDGk~l~~~~~~-~-------------~~~~~l~~~dl~~g~~ 354 (783)
...|++++.. + +-..+........ ....+.++|||+.. ++... + .....||.+|.++|.
T Consensus 106 ~~~v~~~~~~-g--~~~~~~~~~~~~~~~~~~~i~~d~dG~l~-~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~- 180 (305)
T 3dr2_A 106 RRAITRSDAD-G--QAHLLVGRYAGKRLNSPNDLIVARDGAIW-FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP- 180 (305)
T ss_dssp TTEEEEECTT-S--CEEEEECEETTEECSCCCCEEECTTSCEE-EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-
T ss_pred CCEEEEECCC-C--CEEEEEeccCCCccCCCCCEEECCCCCEE-EeCcCCCccccccccccccccCCCeEEEEcCCCCc-
Confidence 2357766653 2 1112221111110 11357889999844 32100 0 012679999986642
Q ss_pred CcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCC--CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC
Q psy2521 355 GKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKN--APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~--~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~ 431 (783)
...+. +..... ..|++||+.||+..... ..+..|+++++++..... ..++..........+....++
T Consensus 181 --------~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~-~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 181 --------LQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHD-RRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp --------CEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEE-EEEEECCSSSCCCSEEECTTS
T ss_pred --------EEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccC-CeEEEECCCCCCCeEEECCCC
Confidence 22222 222111 25899999998865432 113579998886532111 122211111122334444445
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|++.. .+ .|++++. +|+.+..+..+.+ +..+...++++.++++.+. .+|++++
T Consensus 251 ~lwv~~-~~---gv~~~~~-~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 251 WLWSSS-GT---GVCVFDS-DGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp CEEECC-SS---EEEEECT-TSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred CEEEec-CC---cEEEECC-CCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 566544 33 4999999 7888778877642 3344444777888876543 6888775
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=1e-05 Score=101.99 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=144.7
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..++|||||++||.+... ..|++||+.+|+.+... ........+.|+|+++..++....
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~------------ 720 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGS------------ 720 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEE------------
T ss_pred CCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEe------------
Confidence 347889999999999876432 46999999999865422 122233578999986654444421
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc-ccCCCCcee-
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-ISGKFPLKT- 365 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~-l~~~~~~~~- 365 (783)
....|.++++.++. ....+.. .......+.|+|||++|+....+ ..|.++|+.++.... +........
T Consensus 721 --~d~~v~vwd~~~~~--~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~d----g~v~vwd~~~~~~~~~~~~~~~~~~~ 790 (1249)
T 3sfz_A 721 --NDFFLKLWDLNQKE--CRNTMFG--HTNSVNHCRFSPDDELLASCSAD----GTLRLWDVRSANERKSINVKRFFLSS 790 (1249)
T ss_dssp --TTSCEEEEETTSSS--EEEEECC--CSSCEEEEEECSSTTEEEEEESS----SEEEEEEGGGTEEEEEEECCCCC---
T ss_pred --CCCeEEEEECCCcc--hhheecC--CCCCEEEEEEecCCCEEEEEECC----CeEEEEeCCCCcccceeccccccccc
Confidence 12358888887653 1222222 22345678999999988765432 578889987631000 000000000
Q ss_pred --eecCcccee--EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 366 --VIPGMDHHH--EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 366 --l~~~~~~~~--~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
......... ..|+|+|+.++..++ ..+..+++.++.. ...+.... ...+..+.+..++.+++....++
T Consensus 791 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~-----~~v~~~d~~~~~~--~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~dg 862 (1249)
T 3sfz_A 791 EDPPEDVEVIVKCCSWSADGDKIIVAAK-----NKVLLFDIHTSGL--LAEIHTGH-HSTIQYCDFSPYDHLAVIALSQY 862 (1249)
T ss_dssp -----CCCCCBCCCCBCTTSSEEEEEET-----TEEEEEETTTCCE--EEEEECSS-SSCCCEEEECSSTTEEEEECSSS
T ss_pred CCccccccceEEEEEECCCCCEEEEEcC-----CcEEEEEecCCCc--eeEEcCCC-CCceEEEEEcCCCCEEEEEeCCC
Confidence 000000011 148999998887652 4688899877541 22232222 22333333333355566665554
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+|++.+++.+..+....+.+..+.+++++..++... . -..+..+|+
T Consensus 863 --~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s-~---dg~v~vw~~ 911 (1249)
T 3sfz_A 863 --CVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS-D---DQTIRVWET 911 (1249)
T ss_dssp --CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-T---TSCEEEEEH
T ss_pred --eEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe-C---CCeEEEEEc
Confidence 588999988877777766666777888888887655332 2 246777775
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=4e-05 Score=87.45 Aligned_cols=253 Identities=13% Similarity=0.103 Sum_probs=142.0
Q ss_pred EeeEEEC----CCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cc-----------cccCeeEEeeCCCEEEEEEe
Q psy2521 211 LKLYAFS----DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KN-----------VKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 211 l~~~~~S----PDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~-----------~~~~~~~WspDg~~l~y~~~ 274 (783)
-.++.+| |||++++.+.... .++.|+|..|.+.+.... .+ .+...+..|+++..+++...
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~----~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWP----PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEET----TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CceeEEccccCCCCCEEEEEEccC----CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 3468999 7999887665433 358899999988654221 11 12346677888876665541
Q ss_pred ecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 275 CDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 275 ~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...+|++.+..+.. ...+...+.. .+..+..|+||||+++..... .+.|.++|++++.
T Consensus 318 ---------------~~g~v~~vd~~~~~--~~~v~~i~~~-~~~~d~~~~pdgr~~~va~~~---sn~V~ViD~~t~k- 375 (567)
T 1qks_A 318 ---------------ETGKILLVDYTDLN--NLKTTEISAE-RFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK- 375 (567)
T ss_dssp ---------------TTTEEEEEETTCSS--EEEEEEEECC-SSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE-
T ss_pred ---------------CCCeEEEEecCCCc--cceeeeeecc-ccccCceECCCCCEEEEEeCC---CCeEEEEECCCCc-
Confidence 12367777765432 1122222222 244578899999999876543 3789999998841
Q ss_pred CcccCCCCceee---ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC--CCCcEEe--ecCCCCceEEEEEE
Q psy2521 355 GKISGKFPLKTV---IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC--EKNWKTL--IPEDENRTLDVVAA 427 (783)
Q Consensus 355 ~~l~~~~~~~~l---~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~--~~~~~~l--i~~~~~~~l~~~~~ 427 (783)
+.. ...+ ......+..++.|+++.+|+.++.+ ...|..+|.+..+ ...|+.+ ++-.....+.-...
T Consensus 376 --l~~---~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~ 448 (567)
T 1qks_A 376 --LVA---IEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTH 448 (567)
T ss_dssp --EEE---EEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECC
T ss_pred --EEE---EEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeC
Confidence 110 0011 0000112234677778887766543 2358888876522 1124332 22211121211123
Q ss_pred eeCCEEEEEEecCC----eeEEEEEECCCC-----ce-eeeec------CC--CeEEEeeeccccccEEEEEEec-CCCC
Q psy2521 428 VANNKLIVHYIQNV----RSVMDLHDLNTG-----KR-LHSFP------LD--LGQITHISGRRKYNEVFYGFTS-FLQP 488 (783)
Q Consensus 428 ~~g~~l~~~~~~~g----~~~l~~~dl~~G-----~~-~~~l~------~~--~g~v~~~s~~~d~~~l~~~~ss-~~~P 488 (783)
+++.++++...-+. ...|.++|+++. .. ...++ ++ ...+..+..++++++++++.-+ -...
T Consensus 449 p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~ 528 (567)
T 1qks_A 449 PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQE 528 (567)
T ss_dssp TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSC
T ss_pred CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCC
Confidence 44456666553221 357999998654 11 12232 22 2345578889999999987532 2356
Q ss_pred ceEEEEeC
Q psy2521 489 GTIYHCNI 496 (783)
Q Consensus 489 ~~vy~~d~ 496 (783)
..|..+|.
T Consensus 529 ~~i~v~D~ 536 (567)
T 1qks_A 529 SALVVVDD 536 (567)
T ss_dssp CEEEEEET
T ss_pred CcEEEEEC
Confidence 78999998
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=98.55 E-value=1.1e-05 Score=86.10 Aligned_cols=235 Identities=14% Similarity=0.093 Sum_probs=132.3
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..++|||||++|+-+.. ..+|++||+.+++.+.... .......++|+|||+.|+-...
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~-----D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~------------- 138 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSW-----DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA------------- 138 (343)
T ss_dssp SCEEEEEECSSTTEEEEEET-----TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-------------
T ss_pred CceEEEEECCCCCEEEEEcC-----CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-------------
Confidence 34778999999998874432 2579999999987653221 2223357899999998875552
Q ss_pred ccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCC----------cEEEEEEecCCCCcEEEEEECCCCCCCc
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCG----------RYLLVSTSNNTQGSDLHYFDLHSLPDGK 356 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDG----------k~l~~~~~~~~~~~~l~~~dl~~g~~~~ 356 (783)
...|.++++... ...... ..........+.|+|++ .+++.... ...|.++|....
T Consensus 139 ---d~~i~~wd~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~iwd~~~~---- 204 (343)
T 2xzm_R 139 ---EREIKLWNILGE---CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW----DGRLKVWNTNFQ---- 204 (343)
T ss_dssp ---TSCEEEEESSSC---EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET----TSEEEEEETTTE----
T ss_pred ---CCEEEEEeccCC---ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC----CCEEEEEcCCCc----
Confidence 235777776521 111111 11222345678899987 45553322 257888885431
Q ss_pred ccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 357 ISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 357 l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
....+.+...... .|+|+|+.|+..+. .+.|..+|+..... ....+... ..+..+.+..++.++
T Consensus 205 ------~~~~~~~h~~~v~~~~~s~~g~~l~sgs~----dg~v~iwd~~~~~~--~~~~~~~~--~~v~~v~~sp~~~~l 270 (343)
T 2xzm_R 205 ------IRYTFKAHESNVNHLSISPNGKYIATGGK----DKKLLIWDILNLTY--PQREFDAG--STINQIAFNPKLQWV 270 (343)
T ss_dssp ------EEEEEECCSSCEEEEEECTTSSEEEEEET----TCEEEEEESSCCSS--CSEEEECS--SCEEEEEECSSSCEE
T ss_pred ------eeEEEcCccccceEEEECCCCCEEEEEcC----CCeEEEEECCCCcc--cceeecCC--CcEEEEEECCCCCEE
Confidence 1111222222222 58999988775443 34688888843221 11222222 224444444435555
Q ss_pred EEEecCCeeEEEEEECCCCceee--eec-----------CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRLH--SFP-----------LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~~--~l~-----------~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.....+ .+.+|++.+++... .+. ...+.+..+.++|++..++.... -..+..+|+
T Consensus 271 a~~~d~---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~----Dg~v~~w~~ 338 (343)
T 2xzm_R 271 AVGTDQ---GVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT----DGVIRTFSF 338 (343)
T ss_dssp EEEESS---CEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET----TSEEEEEEE
T ss_pred EEECCC---CEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC----CceEEEEEE
Confidence 544433 38899986665432 232 11234667788888876654322 246777776
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=98.55 E-value=8.5e-06 Score=88.17 Aligned_cols=243 Identities=10% Similarity=0.055 Sum_probs=138.0
Q ss_pred EEeeEEECCC----C---cEEEEEEecCCCceEEEEEEECCCCcc-----ccc-ccc-----ccccCeeEEe----eCCC
Q psy2521 210 ALKLYAFSDN----G---KHFAYCLSKSGSDWNTLHIKDVDTGKD-----YPE-VLK-----NVKFPSISWT----HDHK 267 (783)
Q Consensus 210 ~l~~~~~SPD----G---~~la~~~~~~G~d~~~i~v~Dl~tg~~-----~~~-~~~-----~~~~~~~~Ws----pDg~ 267 (783)
.+..++|+|| | ++|+.+.. + ..|++||+.+++. +.. ... ......+.|+ ||++
T Consensus 64 ~v~~~~~~~~~~~~g~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 138 (397)
T 1sq9_A 64 GLHHVDVLQAIERDAFELCLVATTSF-S----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS 138 (397)
T ss_dssp CEEEEEEEEEEETTTEEEEEEEEEET-T----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C
T ss_pred cEEEEEEecccccCCccccEEEEEcC-C----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc
Confidence 3778999999 9 88876643 2 3599999988874 321 111 1334689999 9999
Q ss_pred E-EEEEEeecCCCCCCCCcccccCCceEEEEEcCC------CCCCc---eeEEec-----CCCCeeEEEEEEecCCcEEE
Q psy2521 268 G-FFYNQYCDINGTADGTETTAHMGQKIYYHVLGT------EQDKD---IPVVEF-----PNGRSLGLHSEVTDCGRYLL 332 (783)
Q Consensus 268 ~-l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt------~~~~d---~~v~~~-----~~~~~~~~~~~~SpDGk~l~ 332 (783)
. |+.... ...|+++++.+ ..... ...+.. .........+.|+||| .|+
T Consensus 139 ~~l~~~~~----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~ 201 (397)
T 1sq9_A 139 HRLVATDV----------------KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIA 201 (397)
T ss_dssp EEEEEEET----------------TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEE
T ss_pred eEEEEEeC----------------CCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEE
Confidence 8 665552 12567777665 22111 002211 1112234578999999 555
Q ss_pred EEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC---c---ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 333 VSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG---M---DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 333 ~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~---~---~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
... ....|.++|+.++. ... .+.. . .... . .|+|+++.|+..+.. ...+.|..+|+.+
T Consensus 202 ~~~----~dg~i~i~d~~~~~--------~~~-~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 202 TGF----NNGTVQISELSTLR--------PLY-NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEF 267 (397)
T ss_dssp EEC----TTSEEEEEETTTTE--------EEE-EEECCC---CCCCCEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTT
T ss_pred EEe----CCCcEEEEECCCCc--------eeE-EEeccccccccCCccceEEECCCCCEEEEEecC-CCCceEEEEECCC
Confidence 432 23689999998731 111 1222 1 2222 2 589998877765432 1125788999876
Q ss_pred CCCCCcEEeecC------------CCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec------CC----
Q psy2521 405 PCEKNWKTLIPE------------DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP------LD---- 462 (783)
Q Consensus 405 ~~~~~~~~li~~------------~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~------~~---- 462 (783)
+. ....+... . ...+..+.+..++.+++....++ .|.+||+.+++.+..+. ..
T Consensus 268 ~~--~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 268 GE--RIGSLSVPTHSSQASLGEFAH-SSWVMSLSFNDSGETLCSAGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp CC--EEEEECBC--------CCBSB-SSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred Cc--ccceeccCccccccccccccc-CCcEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCceeEEEecccCcccchhhh
Confidence 54 12233220 2 23334444443355556666554 78999998888777776 32
Q ss_pred -----------CeEEEeeecccccc---------EEEEEEecCCCCceEEEEeC
Q psy2521 463 -----------LGQITHISGRRKYN---------EVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 463 -----------~g~v~~~s~~~d~~---------~l~~~~ss~~~P~~vy~~d~ 496 (783)
...|..+.+++++. .++++.+. -..+..||+
T Consensus 343 ~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~---dg~i~iw~~ 393 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCL---DRSIRWFRE 393 (397)
T ss_dssp CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEET---TTEEEEEEE
T ss_pred hccccccccccCCceeEEEeccccccccccccccceEEEecC---CCcEEEEEc
Confidence 45577777788763 34444433 246777877
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.54 E-value=1e-05 Score=95.36 Aligned_cols=237 Identities=14% Similarity=0.109 Sum_probs=135.5
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..++|||||++|+-+.. ..+|++||+.+++.+.... .......++|+||++.|+-...+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~-----Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D------------ 493 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSW-----DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD------------ 493 (694)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT------------
T ss_pred CcEEEEEECCCCCEEEEEeC-----CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC------------
Confidence 34778999999999885543 2579999999987553221 22223578999999988765522
Q ss_pred ccCCceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcE-EEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRY-LLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~-l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
..|.++++... ....+... ..+......+.|+|++.. ++++.+. ...|.++|+.++. ...
T Consensus 494 ----~~i~iwd~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~---d~~v~vwd~~~~~---------~~~ 555 (694)
T 3dm0_A 494 ----RTIKLWNTLGE--CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW---DKTVKVWNLSNCK---------LRS 555 (694)
T ss_dssp ----SCEEEECTTSC--EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTCC---------EEE
T ss_pred ----CEEEEEECCCC--cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC---CCeEEEEECCCCc---------EEE
Confidence 24666665322 11111111 112234567899999842 3333322 2578999998731 122
Q ss_pred eecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 366 VIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 366 l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
.+.+...... .|+|+|+.|+..+. .+.|..+|+.++. .+..-.....+..+.+..++.++.....+
T Consensus 556 ~~~~h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~-----~~~~~~~~~~v~~~~~sp~~~~l~~~~~~--- 623 (694)
T 3dm0_A 556 TLAGHTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEGK-----KLYSLEANSVIHALCFSPNRYWLCAATEH--- 623 (694)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTTE-----EEECCBCSSCEEEEEECSSSSEEEEEETT---
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCc-----eEEEecCCCcEEEEEEcCCCcEEEEEcCC---
Confidence 2233332222 58999887765443 2457788887654 22211112334455554445666555544
Q ss_pred EEEEEECCCCceeeeecCC-C------------------eEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 444 VMDLHDLNTGKRLHSFPLD-L------------------GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~-~------------------g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.+||+.+++.+..+... . ..+..+.+++++..++. .+. -..|..+|+
T Consensus 624 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s-gs~---Dg~i~iW~i 691 (694)
T 3dm0_A 624 GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS-GYT---DGVIRVWGI 691 (694)
T ss_dssp EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE-EET---TSEEEEEEC
T ss_pred CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE-EcC---CCeEEEEec
Confidence 3999999877766555422 0 01445667777766552 222 246777776
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.54 E-value=1.6e-05 Score=84.79 Aligned_cols=248 Identities=10% Similarity=0.066 Sum_probs=129.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-cccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
-.+..++|||||++||-+... .++++||+.++.... .++. ......++|+|||+.|+-...+
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D---------- 126 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD---------- 126 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT----------
T ss_pred CcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC----------
Confidence 457889999999999876532 358899987765321 1222 2223579999999988766522
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
..|+++++.+.... ..+............+.|+|||++|+....+ ..|.++|+.++. .....
T Consensus 127 ------~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~~w~~~~~~-------~~~~~ 188 (345)
T 3fm0_A 127 ------KSVWVWEVDEEDEY-ECVSVLNSHTQDVKHVVWHPSQELLASASYD----DTVKLYREEEDD-------WVCCA 188 (345)
T ss_dssp ------SCEEEEEECTTSCE-EEEEEECCCCSCEEEEEECSSSSCEEEEETT----SCEEEEEEETTE-------EEEEE
T ss_pred ------CeEEEEECCCCCCe-EEEEEecCcCCCeEEEEECCCCCEEEEEeCC----CcEEEEEecCCC-------EEEEE
Confidence 25777887654321 1222111222234678999999988755433 467777765520 00011
Q ss_pred eecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCC--------CCcEEeec--CCCCceEEEEEEeeCCEE
Q psy2521 366 VIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE--------KNWKTLIP--EDENRTLDVVAAVANNKL 433 (783)
Q Consensus 366 l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~--------~~~~~li~--~~~~~~l~~~~~~~g~~l 433 (783)
.+.+..... . .|+|+|+.|+..+..+ .-+|+.....+... ..|+.+.. ......+..+.+...+..
T Consensus 189 ~~~~h~~~v~~l~~sp~g~~l~s~s~D~--~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~ 266 (345)
T 3fm0_A 189 TLEGHESTVWSLAFDPSGQRLASCSDDR--TVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA 266 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTS--CEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCC
T ss_pred EecCCCCceEEEEECCCCCEEEEEeCCC--eEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCE
Confidence 122222222 2 5899998877655431 22344332221110 01111111 101122333333333445
Q ss_pred EEEEecCCeeEEEEEECCCCcee--------eee-cCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 434 IVHYIQNVRSVMDLHDLNTGKRL--------HSF-PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 434 ~~~~~~~g~~~l~~~dl~~G~~~--------~~l-~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++...++. |.+|+...+... ..+ ....+.|..+.++|++..++++.+.- .++..+++
T Consensus 267 l~s~~~d~~--i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~D---g~v~~W~~ 333 (345)
T 3fm0_A 267 LATACGDDA--IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDD---GEVAFWKY 333 (345)
T ss_dssp EEEEETTSC--EEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETT---SCEEEEEE
T ss_pred EEEEeCCCe--EEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCC---CcEEEEEe
Confidence 555555653 556665333210 011 12245677888888876565555432 46777877
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.53 E-value=7.2e-06 Score=90.34 Aligned_cols=242 Identities=10% Similarity=0.105 Sum_probs=129.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-----------cc-ccccc------------cccCeeEEeeC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-----------YP-EVLKN------------VKFPSISWTHD 265 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-----------~~-~~~~~------------~~~~~~~WspD 265 (783)
.+..++|||||++||.+... ..|+|||+.+++. .. ..... .....+.|+|+
T Consensus 30 ~V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKG-----GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp SEEEEEECSSSSEEEEEETT-----SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cEEEEEECCCCCEEEEEcCC-----CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 47889999999999876532 4699999988762 11 11111 22467999999
Q ss_pred C--CEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC-------------------------------------Cc
Q psy2521 266 H--KGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD-------------------------------------KD 306 (783)
Q Consensus 266 g--~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-------------------------------------~d 306 (783)
+ ..|+....+ ..|.++++.+... ..
T Consensus 105 ~~~~~l~s~s~d----------------~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (447)
T 3dw8_B 105 KNAAQFLLSTND----------------KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASP 168 (447)
T ss_dssp CSSSEEEEEECS----------------SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEE
T ss_pred CCcceEEEeCCC----------------CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccc
Confidence 8 556655422 1344444432110 00
Q ss_pred eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee------ecCcccee-E-EEE
Q psy2521 307 IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV------IPGMDHHH-E-IIA 378 (783)
Q Consensus 307 ~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l------~~~~~~~~-~-~~s 378 (783)
..++.... ......+.|+|||++|+.. . ...|.++|+..+ .. ....+ ..+..... . .|+
T Consensus 169 ~~~~~~~h-~~~v~~~~~~~~~~~l~s~-~----d~~i~iwd~~~~-~~------~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (447)
T 3dw8_B 169 RRIFANAH-TYHINSISINSDYETYLSA-D----DLRINLWHLEIT-DR------SFNIVDIKPANMEELTEVITAAEFH 235 (447)
T ss_dssp EEEECSCC-SSCCCEEEECTTSSEEEEE-C----SSEEEEEETTEE-EE------EEEEEECCCSSGGGCCCCEEEEEEC
T ss_pred eEEeccCC-CcceEEEEEcCCCCEEEEe-C----CCeEEEEECCCC-Cc------eeeeeecccccccccCcceEEEEEC
Confidence 01121111 2234578999999988753 2 368999999741 00 01100 11122222 2 589
Q ss_pred eeC-CEEEEEECCCCCCceEEEEcCCCCCC-CCcEEeecCCCC-----------ceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 379 NNG-PELIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDEN-----------RTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 379 ~dg-~~l~~~t~~~~~~~~L~~~d~~~~~~-~~~~~li~~~~~-----------~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
|+| ..|+..+.. +.|..+|+.++.. ......+..... ..+..+.+..++.+++.... ..|
T Consensus 236 p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---~~v 308 (447)
T 3dw8_B 236 PNSCNTFVYSSSK----GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY---LSV 308 (447)
T ss_dssp SSCTTEEEEEETT----SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES---SEE
T ss_pred CCCCcEEEEEeCC----CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC---CeE
Confidence 998 555554432 3588888876541 001223333212 13444444433555554443 579
Q ss_pred EEEECCC-CceeeeecCCCeE---------------EEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNT-GKRLHSFPLDLGQ---------------ITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~-G~~~~~l~~~~g~---------------v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+.+ ++.+..+...... +..+.+++++..++ +.+ .-..++.||+
T Consensus 309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~-s~s---~dg~v~iwd~ 371 (447)
T 3dw8_B 309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVM-TGS---YNNFFRMFDR 371 (447)
T ss_dssp EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEE-EEC---STTEEEEEET
T ss_pred EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEE-Eec---cCCEEEEEEc
Confidence 9999975 6655555433110 11255678877663 322 2368999999
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=98.53 E-value=2.1e-05 Score=85.03 Aligned_cols=245 Identities=9% Similarity=0.035 Sum_probs=135.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc------ccc-ccccccccCeeEEeeC----C---CEEEEEEee
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK------DYP-EVLKNVKFPSISWTHD----H---KGFFYNQYC 275 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~------~~~-~~~~~~~~~~~~WspD----g---~~l~y~~~~ 275 (783)
.+..++|+| ++|+.+.. + ..|++||+.+++ .+. ..........+.|+|| | +.|+....
T Consensus 18 ~i~~~~~~~--~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~- 89 (397)
T 1sq9_A 18 DIFSVSACN--SFTVSCSG-D----GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF- 89 (397)
T ss_dssp CEEEEEECS--SEEEEEET-T----SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET-
T ss_pred CeEEEEecC--CeEEEEcC-C----CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC-
Confidence 477888999 66665533 2 479999999887 221 1112222357899999 8 77776652
Q ss_pred cCCCCCCCCcccccCCceEEEEEcCCCCCCc---eeEEecCC-C--CeeEEEEEEe----cCCcE-EEEEEecCCCCcEE
Q psy2521 276 DINGTADGTETTAHMGQKIYYHVLGTEQDKD---IPVVEFPN-G--RSLGLHSEVT----DCGRY-LLVSTSNNTQGSDL 344 (783)
Q Consensus 276 ~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d---~~v~~~~~-~--~~~~~~~~~S----pDGk~-l~~~~~~~~~~~~l 344 (783)
...|+++++.+..... ...+.... . ......+.|+ |||++ |+.... ...|
T Consensus 90 ---------------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~----dg~i 150 (397)
T 1sq9_A 90 ---------------SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV----KGTT 150 (397)
T ss_dssp ---------------TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET----TSCE
T ss_pred ---------------CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC----CCcE
Confidence 2257777776543211 11222211 0 1245678999 99999 665432 2578
Q ss_pred EEEECCC------CCCCcccCCCCceeee------cCccc-eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCc
Q psy2521 345 HYFDLHS------LPDGKISGKFPLKTVI------PGMDH-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW 410 (783)
Q Consensus 345 ~~~dl~~------g~~~~l~~~~~~~~l~------~~~~~-~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~ 410 (783)
+++|+.+ +....+ .+...+. ..... -.. .|+|++ .|+. ... .+.|..+|+.+.. .
T Consensus 151 ~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~-~~~---dg~i~i~d~~~~~---~ 219 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNW---SPTLELQGTVESPMTPSQFATSVDISERG-LIAT-GFN---NGTVQISELSTLR---P 219 (397)
T ss_dssp EEEEEESSSSHHHHTTTCC---CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE-ECT---TSEEEEEETTTTE---E
T ss_pred EEEeCCccccccccceeec---cCcceeeeeeccccCCCCCceEEEECCCc-eEEE-EeC---CCcEEEEECCCCc---e
Confidence 8888765 311100 0000121 11111 112 588988 4443 332 3568889987654 2
Q ss_pred EEeecC---C--CCceEEEEE-EeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC-------------CCeEEEeeec
Q psy2521 411 KTLIPE---D--ENRTLDVVA-AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-------------DLGQITHISG 471 (783)
Q Consensus 411 ~~li~~---~--~~~~l~~~~-~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-------------~~g~v~~~s~ 471 (783)
...+.. . ....+..+. ..+++.|+.....++...|.+||+.+++.+..+.. ..+.+..+.+
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 222222 1 022333444 34545555554444446899999988887777765 4456777888
Q ss_pred cccccEEEEEEecCCCCceEEEEeC
Q psy2521 472 RRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 472 ~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++++..++... .-..++.||+
T Consensus 300 ~~~~~~l~~~~----~dg~i~iwd~ 320 (397)
T 1sq9_A 300 NDSGETLCSAG----WDGKLRFWDV 320 (397)
T ss_dssp CSSSSEEEEEE----TTSEEEEEET
T ss_pred CCCCCEEEEEe----CCCeEEEEEc
Confidence 88887655332 2357999999
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.52 E-value=2.6e-05 Score=89.58 Aligned_cols=272 Identities=9% Similarity=0.054 Sum_probs=154.3
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCC----CeEEEeCCCCcCCCCcEE-EeeEEECC--CCcEEEEEEecCCCce
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTG----STEVFLDPNKLSKDGTTA-LKLYAFSD--NGKHFAYCLSKSGSDW 234 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g----~~~~llD~n~~~~~g~~~-l~~~~~SP--DG~~la~~~~~~G~d~ 234 (783)
..+++|.++++.. .+.-.+|... ++ .....+. .+... +..++||| ||++||.+...
T Consensus 25 ~~spdg~~l~~~~----~~~v~v~~~~--~~~~~~~~~~~~~------~h~~~~v~~~~~sp~~~~~~l~s~~~d----- 87 (615)
T 1pgu_A 25 SYDPTTNAIAYPC----GKSAFVRCLD--DGDSKVPPVVQFT------GHGSSVVTTVKFSPIKGSQYLCSGDES----- 87 (615)
T ss_dssp EEETTTTEEEEEE----TTEEEEEECC--SSCCSSCSEEEEC------TTTTSCEEEEEECSSTTCCEEEEEETT-----
T ss_pred EECCCCCEEEEec----CCeEEEEECC--CCCCccccceEEe------cCCCceEEEEEECcCCCCCEEEEecCC-----
Confidence 3456788777764 2334555433 23 2222222 12234 78899999 99999876542
Q ss_pred EEEEEEECCCC--------ccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC
Q psy2521 235 NTLHIKDVDTG--------KDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK 305 (783)
Q Consensus 235 ~~i~v~Dl~tg--------~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~ 305 (783)
..|++||+.++ +.+.. .........++|+|||+.|+....+. .....|+.++.+.
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~------------~~~~~v~~~d~~~---- 151 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR------------DNFGVFISWDSGN---- 151 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS------------SCSEEEEETTTCC----
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC------------CCccEEEEEECCC----
Confidence 46999999766 22111 11222346889999999988777321 1234576666321
Q ss_pred ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc---ee-E-EEEee
Q psy2521 306 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH---HH-E-IIANN 380 (783)
Q Consensus 306 d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~---~~-~-~~s~d 380 (783)
.+............+.|+|||+++++.... ...|.++|+.++. ....+..... .. . .|+|+
T Consensus 152 --~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 152 --SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFK---------FSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp --EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBE---------EEEEECSSSCTTCCEEEEEECST
T ss_pred --cceeeecCCccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCcc---------eeeeecccCCCCceEEEEEECCC
Confidence 122222223345688999999965555433 3689999987731 1112222222 22 2 58999
Q ss_pred -CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee-c---CCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 381 -GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI-P---EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 381 -g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li-~---~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
|+.|+..+.. +.|..+|+.++. ....+ . .. ...+..+.+.+ +.+++....++ .|.+||+.+++.
T Consensus 218 ~~~~l~~~~~d----g~i~vwd~~~~~---~~~~~~~~~~~~-~~~v~~~~~~~-~~~l~~~~~d~--~i~~wd~~~~~~ 286 (615)
T 1pgu_A 218 SGEFVITVGSD----RKISCFDGKSGE---FLKYIEDDQEPV-QGGIFALSWLD-SQKFATVGADA--TIRVWDVTTSKC 286 (615)
T ss_dssp TCCEEEEEETT----CCEEEEETTTCC---EEEECCBTTBCC-CSCEEEEEESS-SSEEEEEETTS--EEEEEETTTTEE
T ss_pred CCCEEEEEeCC----CeEEEEECCCCC---EeEEeccccccc-CCceEEEEEcC-CCEEEEEcCCC--cEEEEECCCCcE
Confidence 8877765542 458888987654 23333 2 22 23344444444 55555665553 688999988887
Q ss_pred eeeecCC----CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 456 LHSFPLD----LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 456 ~~~l~~~----~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+..+..+ ...+..+... ++..++... . -..++.+|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-~---~g~i~~~d~ 326 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLS-L---DGTLNFYEL 326 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEE-T---TSCEEEEET
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEE-C---CCCEEEEEC
Confidence 6666554 1233333332 444444332 2 346888888
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.3e-05 Score=83.21 Aligned_cols=235 Identities=11% Similarity=0.069 Sum_probs=138.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+..+.||+ +..++.+. + ..|++||+++|+....... ......++|+|||+.|+....+
T Consensus 96 ~~~~~~s~-~~l~~~~~--d----~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d------------- 155 (401)
T 4aez_A 96 LNLLDWSN-LNVVAVAL--E----RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN------------- 155 (401)
T ss_dssp CBCEEECT-TSEEEEEE--T----TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-------------
T ss_pred EEEEeecC-CCEEEEEC--C----CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-------------
Confidence 45577886 34444332 1 4699999999986543221 2234689999999988877622
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
..|.++++.+.. ....+... ......+.| +++.|+.... ...|.++|+... ..... ...
T Consensus 156 ---g~i~iwd~~~~~--~~~~~~~~--~~~v~~~~~--~~~~l~~~~~----dg~i~i~d~~~~-------~~~~~-~~~ 214 (401)
T 4aez_A 156 ---GLVDIYDVESQT--KLRTMAGH--QARVGCLSW--NRHVLSSGSR----SGAIHHHDVRIA-------NHQIG-TLQ 214 (401)
T ss_dssp ---SCEEEEETTTCC--EEEEECCC--SSCEEEEEE--ETTEEEEEET----TSEEEEEETTSS-------SCEEE-EEE
T ss_pred ---CeEEEEECcCCe--EEEEecCC--CCceEEEEE--CCCEEEEEcC----CCCEEEEecccC-------cceee-EEc
Confidence 257788886543 22223222 223345666 5666654332 368999999752 11112 222
Q ss_pred CccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 GMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
+...... .|+|+++.|+..+.. +.|..+|+.++. ....+..+. ..+....+..++..+++.........|.
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s~~~d----~~v~iwd~~~~~--~~~~~~~~~-~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLASGGND----NVVQIWDARSSI--PKFTKTNHN-AAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTCSS--EEEEECCCS-SCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCC----CeEEEccCCCCC--ccEEecCCc-ceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 2222222 588998877765543 358888987654 122233332 3333333444446777765422235799
Q ss_pred EEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+||+.+++.+..+... +.+..+.+++++..++....+. -..+..+|+
T Consensus 288 i~d~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~g~~--dg~i~v~~~ 334 (401)
T 4aez_A 288 FWNAATGARVNTVDAG-SQVTSLIWSPHSKEIMSTHGFP--DNNLSIWSY 334 (401)
T ss_dssp EEETTTCCEEEEEECS-SCEEEEEECSSSSEEEEEECTT--TCEEEEEEE
T ss_pred EEECCCCCEEEEEeCC-CcEEEEEECCCCCeEEEEeecC--CCcEEEEec
Confidence 9999888877777543 4567788888888777544222 357888888
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-05 Score=88.20 Aligned_cols=246 Identities=9% Similarity=0.038 Sum_probs=138.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCC----------Ccccc-ccccccccCeeEEeeCCCEEEEEEeecCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----------GKDYP-EVLKNVKFPSISWTHDHKGFFYNQYCDING 279 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t----------g~~~~-~~~~~~~~~~~~WspDg~~l~y~~~~~~~~ 279 (783)
+..++|+|++..++++....| .|++||+.+ .+.+. ..........++|+|+++.++++...
T Consensus 131 v~~l~~~p~~~~~lat~~~dg----~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~---- 202 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTPSS----DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD---- 202 (430)
T ss_dssp CSEEEEETTEEEEEEEECSSS----CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT----
T ss_pred EEEEEECCCCCcEEEEECCCC----cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC----
Confidence 557899998555555554444 599999976 22221 11122234689999999855555521
Q ss_pred CCCCCcccccCCceEEEEEcCCCCCCc-----eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 280 TADGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 280 ~~~g~~~~~~~~~~v~~~~lgt~~~~d-----~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...|.++++.+..... ...+.. .......+.|+|++..++++... ...|+++|+.++..
T Consensus 203 -----------dg~i~vwd~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 203 -----------DHTICLWDINATPKEHRVIDAKNIFTG--HTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNNNT 266 (430)
T ss_dssp -----------TSCEEEEETTSCCBGGGEEECSEEECC--CSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCSCS
T ss_pred -----------CCeEEEEeCCCCCCCCceeccceeecC--CCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCCCC
Confidence 2358888887643211 122222 12235678999965555544432 36899999987310
Q ss_pred CcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCE
Q psy2521 355 GKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNK 432 (783)
Q Consensus 355 ~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~ 432 (783)
......+ ........ .|+|+++.+++.... .+.|..+|+..... ....+..+. ..+..-.+.++++.
T Consensus 267 -----~~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~---dg~v~vwd~~~~~~-~~~~~~~h~-~~v~~i~~sp~~~~ 335 (430)
T 2xyi_A 267 -----SKPSHTV-DAHTAEVNCLSFNPYSEFILATGSA---DKTVALWDLRNLKL-KLHSFESHK-DEIFQVQWSPHNET 335 (430)
T ss_dssp -----SSCSEEE-ECCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCTTS-CSEEEECCS-SCEEEEEECSSCTT
T ss_pred -----CcceeEe-ecCCCCeEEEEeCCCCCCEEEEEeC---CCeEEEEeCCCCCC-CeEEeecCC-CCEEEEEECCCCCC
Confidence 0112222 22222222 589998877766544 34688889876331 233443333 33333334445456
Q ss_pred EEEEEecCCeeEEEEEECCCC--------------ceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 433 LIVHYIQNVRSVMDLHDLNTG--------------KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~dl~~G--------------~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++++...++ .|.+||+... +.+..+....+.+..+.++++++.++++.+.- ..+..+++
T Consensus 336 ~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d---g~i~iw~~ 408 (430)
T 2xyi_A 336 ILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED---NIMQVWQM 408 (430)
T ss_dssp EEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT---SEEEEEEE
T ss_pred EEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC---CCEEEeEc
Confidence 777777765 5888888541 22222222244577888888887455544432 46777777
|
| >1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-07 Score=105.03 Aligned_cols=114 Identities=11% Similarity=-0.005 Sum_probs=79.9
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|+||++||..+.. ...|...+ ..++++.||.|+++|+||.|... +.... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~--~~~~~--~~~~~~~~dl~~~i~~L~~~~ 141 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAE--YTQAV--QNIRIVGAETAYLIQQLLTEL 141 (452)
T ss_dssp CTTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccc--cHHHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 35579999999986655 23354423 34444349999999999965443 11111 111223467777888887543
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
..+.+++.|+|||+||.+++.++.++|+.++.++...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 142 SYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 3457899999999999999999999999999999877653
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=98.49 E-value=4.1e-05 Score=80.60 Aligned_cols=233 Identities=11% Similarity=0.136 Sum_probs=131.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+...+|||||++|+-+.. ..+|++||+.+|+.+.... .......++|+|+++.|+-...+
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~-----D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D------------ 128 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASW-----DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD------------ 128 (319)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT------------
T ss_pred ccEEEEEECCCCCEEEEEeC-----CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC------------
Confidence 34778999999999876543 2579999999998654222 22223578999999877755522
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCc------EEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGR------YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk------~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
..|.++++... ....+. ........+.++|+++ .|+ ... ....|.++|+.++.
T Consensus 129 ----~~i~vwd~~~~---~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~-s~~---~d~~i~~wd~~~~~-------- 187 (319)
T 3frx_A 129 ----KTIKVWTIKGQ---CLATLL--GHNDWVSQVRVVPNEKADDDSVTII-SAG---NDKMVKAWNLNQFQ-------- 187 (319)
T ss_dssp ----SCEEEEETTSC---EEEEEC--CCSSCEEEEEECCC------CCEEE-EEE---TTSCEEEEETTTTE--------
T ss_pred ----CeEEEEECCCC---eEEEEe--ccCCcEEEEEEccCCCCCCCccEEE-EEe---CCCEEEEEECCcch--------
Confidence 25677777432 111222 2223445677887543 444 322 22578899997731
Q ss_pred CceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec
Q psy2521 362 PLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 362 ~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
....+.+...... .|+|+|+.|+..+. .+.|..+|+.++. ....+ ... ..+..-.+.++ +.+++....
T Consensus 188 -~~~~~~~h~~~v~~~~~sp~g~~l~s~~~----dg~i~iwd~~~~~--~~~~~-~~~-~~v~~~~~sp~-~~~la~~~~ 257 (319)
T 3frx_A 188 -IEADFIGHNSNINTLTASPDGTLIASAGK----DGEIMLWNLAAKK--AMYTL-SAQ-DEVFSLAFSPN-RYWLAAATA 257 (319)
T ss_dssp -EEEEECCCCSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE--EEEEE-ECC-SCEEEEEECSS-SSEEEEEET
T ss_pred -hheeecCCCCcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCCc--EEEEe-cCC-CcEEEEEEcCC-CCEEEEEcC
Confidence 1111222222222 58999987775443 3468888987654 12222 222 23333334444 555555554
Q ss_pred CCeeEEEEEECCCCceeeeecCC--------CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 440 NVRSVMDLHDLNTGKRLHSFPLD--------LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 440 ~g~~~l~~~dl~~G~~~~~l~~~--------~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++ +.+|+++.+..+..+... ...+..+.++|++..++.... -..+..+|+
T Consensus 258 ~~---i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~----Dg~i~vWd~ 315 (319)
T 3frx_A 258 TG---IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT----DNVIRVWQV 315 (319)
T ss_dssp TE---EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET----TSCEEEEEE
T ss_pred CC---cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec----CceEEEEEE
Confidence 43 777777544444444221 233556778888877663322 235777776
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.47 E-value=9.8e-06 Score=86.02 Aligned_cols=242 Identities=12% Similarity=0.056 Sum_probs=133.2
Q ss_pred EEeeEEECCC---CcEEEEEEecCCCceEEEEEEECCCCc-ccccc-ccccccCee------EEeeCCCEEEEEEeecCC
Q psy2521 210 ALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDTGK-DYPEV-LKNVKFPSI------SWTHDHKGFFYNQYCDIN 278 (783)
Q Consensus 210 ~l~~~~~SPD---G~~la~~~~~~G~d~~~i~v~Dl~tg~-~~~~~-~~~~~~~~~------~WspDg~~l~y~~~~~~~ 278 (783)
.+..++|+|+ |++|+.+.. + ..|++||+.+++ .+... ........+ +|+||++.|+....
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~---- 137 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDF-G----GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR---- 137 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEET-T----SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET----
T ss_pred cEEEEEEcCCCCCCceEEEecC-C----CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC----
Confidence 3778999999 688876643 2 359999999887 33211 111112344 45789988876652
Q ss_pred CCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCC--CeeEEEEE----EecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSE----VTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~--~~~~~~~~----~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...|.++++.+... ....+..... ......+. |+||+++|+.... ...|.++|+.++
T Consensus 138 ------------d~~i~vwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~ 200 (357)
T 3i2n_A 138 ------------DGTVKVWDPRQKDD-PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD----NGDIKLFDLRNM 200 (357)
T ss_dssp ------------TSCEEEECTTSCSS-CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET----TSEEEEEETTTT
T ss_pred ------------CCeEEEEeCCCCCC-cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc----CCeEEEEECccC
Confidence 23577888876532 1223322111 11223344 7899999886543 258999999873
Q ss_pred CCCcccCCCCceeeecCccceeE-EEEe---eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEE--eecCCCCceEEEEE
Q psy2521 353 PDGKISGKFPLKTVIPGMDHHHE-IIAN---NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT--LIPEDENRTLDVVA 426 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~~~~~~-~~s~---dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~--li~~~~~~~l~~~~ 426 (783)
. ..........-.. .|+| +++.|+..+.. +.|..+|+.+........ ..... ...+..+.
T Consensus 201 ~---------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~-~~~v~~~~ 266 (357)
T 3i2n_A 201 A---------LRWETNIKNGVCSLEFDRKDISMNKLVATSLE----GKFHVFDMRTQHPTKGFASVSEKAH-KSTVWQVR 266 (357)
T ss_dssp E---------EEEEEECSSCEEEEEESCSSSSCCEEEEEEST----TEEEEEEEEEEETTTEEEEEEEECC-SSCEEEEE
T ss_pred c---------eeeecCCCCceEEEEcCCCCCCCCEEEEECCC----CeEEEEeCcCCCcccceeeeccCCC-cCCEEEEE
Confidence 1 1111111111122 4888 88877765432 457777876543211111 11122 22333444
Q ss_pred EeeCCE-EEEEEecCCeeEEEEEECCCCc-------------------eeeeecCCCeEEEeeeccccccEEEEEEecCC
Q psy2521 427 AVANNK-LIVHYIQNVRSVMDLHDLNTGK-------------------RLHSFPLDLGQITHISGRRKYNEVFYGFTSFL 486 (783)
Q Consensus 427 ~~~g~~-l~~~~~~~g~~~l~~~dl~~G~-------------------~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~ 486 (783)
+..++. +++....++ .|.+||+.++. .+..+....+.|..+.+++++..++++.+.-
T Consensus 267 ~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d- 343 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFD- 343 (357)
T ss_dssp EETTEEEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETT-
T ss_pred ECCCCCcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCC-
Confidence 333244 777777776 56777764432 2233333345677788888887776555432
Q ss_pred CCceEEEEeC
Q psy2521 487 QPGTIYHCNI 496 (783)
Q Consensus 487 ~P~~vy~~d~ 496 (783)
..+..||+
T Consensus 344 --~~i~iw~~ 351 (357)
T 3i2n_A 344 --QTVRVLIV 351 (357)
T ss_dssp --SEEEEEEE
T ss_pred --CcEEEEEC
Confidence 46888887
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.2e-05 Score=82.87 Aligned_cols=236 Identities=8% Similarity=-0.028 Sum_probs=134.2
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc----cccccccccccCeeEEeeCCC-EEEEEEeecCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVLKNVKFPSISWTHDHK-GFFYNQYCDINGTADG 283 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~----~~~~~~~~~~~~~~~WspDg~-~l~y~~~~~~~~~~~g 283 (783)
-.+..++|||||++|+.+... ..|++||+.+++ .............++|+||++ .|+....
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--------- 77 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV--------- 77 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---------
T ss_pred CcEEEEEEcCCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---------
Confidence 347889999999999876532 469999998877 322222222346889999999 7776652
Q ss_pred CcccccCCceEEEEEc-CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC---------CC
Q psy2521 284 TETTAHMGQKIYYHVL-GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS---------LP 353 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~l-gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~---------g~ 353 (783)
...|+++++ .+... ..+...........+.|+| ++.|+.... ...|.++|+.+ +.
T Consensus 78 -------dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~----d~~i~iwd~~~~~~~~~~~~~~ 142 (342)
T 1yfq_A 78 -------QGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASW----DGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp -------TSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEET----TSEEEEECHHHHTTBCEEEEES
T ss_pred -------CCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcC----CCeEEEEcccccccccccccCC
Confidence 235888888 65421 2222200223456789999 888875432 25788888764 21
Q ss_pred CCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCC-CCCCCcEEeecCCCCceEEEEEEee-C
Q psy2521 354 DGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN-PCEKNWKTLIPEDENRTLDVVAAVA-N 430 (783)
Q Consensus 354 ~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~-~~~~~~~~li~~~~~~~l~~~~~~~-g 430 (783)
. .. .+........ .|++++ ++..+. ...|..+|+.+ ... ......... ...+..+.+.. +
T Consensus 143 ~--------~~-~~~~~~~v~~~~~~~~~--l~~~~~----d~~i~i~d~~~~~~~-~~~~~~~~~-~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 143 N--------SN-NTKVKNKIFTMDTNSSR--LIVGMN----NSQVQWFRLPLCEDD-NGTIEESGL-KYQIRDVALLPKE 205 (342)
T ss_dssp C--------SS-SSSSCCCEEEEEECSSE--EEEEES----TTEEEEEESSCCTTC-CCEEEECSC-SSCEEEEEECSGG
T ss_pred e--------ee-EEeeCCceEEEEecCCc--EEEEeC----CCeEEEEECCccccc-cceeeecCC-CCceeEEEECCCC
Confidence 0 01 1111111112 366554 544333 34688889876 431 122232222 23344444443 3
Q ss_pred CEEEEEEecCCeeEEEEEECCCC------ceeeeecCCC---------eEEEeeeccccccEEEEEEecCCCCceEEEEe
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTG------KRLHSFPLDL---------GQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 495 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G------~~~~~l~~~~---------g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d 495 (783)
+.+++....++ .+.+|++..+ +....+.... +.+..+.+++++..++... .-..++.||
T Consensus 206 ~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~vwd 279 (342)
T 1yfq_A 206 QEGYACSSIDG--RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG----SDGIISCWN 279 (342)
T ss_dssp GCEEEEEETTS--EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE----TTSCEEEEE
T ss_pred CCEEEEEecCC--cEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec----CCceEEEEc
Confidence 55566666665 4666666444 4334444321 2677788888877665332 235799999
Q ss_pred C
Q psy2521 496 I 496 (783)
Q Consensus 496 ~ 496 (783)
+
T Consensus 280 ~ 280 (342)
T 1yfq_A 280 L 280 (342)
T ss_dssp T
T ss_pred C
Confidence 9
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=98.46 E-value=4.5e-05 Score=82.53 Aligned_cols=257 Identities=10% Similarity=0.064 Sum_probs=139.3
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecC----------
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDI---------- 277 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~---------- 277 (783)
-.+..++|||||++|+-+.. ..+|++||+.+++.+... ........++|+|||+.|+....+..
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~-----D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQ-----DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SCEEEEEECTTSSCEEEEET-----TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cEEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 34788999999999875543 257999999998754321 12222357899999998875442211
Q ss_pred --CCC-C-----CCC----------------cccccCCceEEEEEcCCCCCCceeEEec---CCCCeeEEEEEEec-CCc
Q psy2521 278 --NGT-A-----DGT----------------ETTAHMGQKIYYHVLGTEQDKDIPVVEF---PNGRSLGLHSEVTD-CGR 329 (783)
Q Consensus 278 --~~~-~-----~g~----------------~~~~~~~~~v~~~~lgt~~~~d~~v~~~---~~~~~~~~~~~~Sp-DGk 329 (783)
.+. . .+. .........|.++++.++. ...++.. .........+.+++ +++
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQ--RISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCC--EEEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCc--EEEEeecccCCCCccCeEEEEeecCCCC
Confidence 000 0 000 0001123456777776542 2223311 11112345677766 677
Q ss_pred EEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCC
Q psy2521 330 YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCE 407 (783)
Q Consensus 330 ~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~ 407 (783)
.++-.. ....|.++|+.... .... .+.+..... . .|+|+|+.|+..+. .+.|..+|+.++..
T Consensus 220 ~l~sgs----~D~~v~~wd~~~~~-------~~~~-~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 220 MFISGS----CDTTVRLWDLRITS-------RAVR-TYHGHEGDINSVKFFPDGQRFGTGSD----DGTCRLFDMRTGHQ 283 (380)
T ss_dssp EEEEEE----TTSCEEEEETTTTC-------CCCE-EECCCSSCCCEEEECTTSSEEEEECS----SSCEEEEETTTTEE
T ss_pred EEEEEE----CCCeEEEEECCCCC-------cceE-EECCcCCCeEEEEEecCCCeEEEEcC----CCeEEEEECCCCcE
Confidence 665332 22578999987410 1122 222222222 2 58999887664332 24588888876541
Q ss_pred CCcEEeecCCCC-----ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec----CCCeEEEeeeccccccEE
Q psy2521 408 KNWKTLIPEDEN-----RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP----LDLGQITHISGRRKYNEV 478 (783)
Q Consensus 408 ~~~~~li~~~~~-----~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~----~~~g~v~~~s~~~d~~~l 478 (783)
...+..+... ..+..+.+..++.+++....++ .|++||+.+++.+..+. ...+.|..+.+++++..+
T Consensus 284 --~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 284 --LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp --EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred --EEEecccccccccccCceEEEEECCCCCEEEEEECCC--CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 1222111100 1122333333355666665554 68999997777655552 224567777788888765
Q ss_pred EEEEecCCCCceEEEEeC
Q psy2521 479 FYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 479 ~~~~ss~~~P~~vy~~d~ 496 (783)
+ +. |. -.++..+++
T Consensus 360 ~-sg-s~--D~~i~iW~~ 373 (380)
T 3iz6_a 360 C-TG-SW--DKNLKIWAF 373 (380)
T ss_dssp E-EE-CT--TSCEEEEEC
T ss_pred E-Ee-eC--CCCEEEEec
Confidence 4 22 22 246888887
|
| >3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=5e-07 Score=94.22 Aligned_cols=117 Identities=9% Similarity=-0.074 Sum_probs=78.8
Q ss_pred EEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHH
Q psy2521 540 PMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDF 619 (783)
Q Consensus 540 ~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~ 619 (783)
...+..|.. .+.+..+.||++||..+... ..|...+...|.++||.|+.+|++|.|... .....+++
T Consensus 51 ~~~i~~p~~-~~~~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----------~~~~~~~l 117 (316)
T 3icv_A 51 DAGLTCQGA-SPSSVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLND-----------TQVNTEYM 117 (316)
T ss_dssp HHTEEETTB-BTTBCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----------HHHHHHHH
T ss_pred hhhEeCCCC-CCCCCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----------HHHHHHHH
Confidence 344555643 23345567889999866541 123312345676679999999999854211 11124577
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC---CCceeEEEEcCCcch
Q psy2521 620 QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGALD 671 (783)
Q Consensus 620 ~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~---p~lf~a~i~~~~~~d 671 (783)
.+.++.+.+. ...+++.|+||||||+++..++..+ |+..+.+|+..|...
T Consensus 118 a~~I~~l~~~--~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 118 VNAITTLYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 7778877765 2336899999999999998887765 588999999887653
|
| >1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E | Back alignment and structure |
|---|
Probab=98.45 E-value=4.3e-07 Score=95.97 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=75.5
Q ss_pred CCccEEEEecCCCCCccC----CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVL----PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 628 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~ 628 (783)
...|+||++||..+.... ..|.. +...|.++||.|+++|+||.|.... .....+++.+.++.+++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~-l~~~L~~~G~~V~~~d~~g~g~s~~----------~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYG-IQEDLQQRGATVYVANLSGFQSDDG----------PNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTT-HHHHHHHTTCCEEECCCCSSCCSSS----------TTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHH-HHHHHHhCCCEEEEEcCCCCCCCCC----------CCCCHHHHHHHHHHHHH
Confidence 456889999998766521 23444 3455666799999999999554321 12335666666666655
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 629 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 629 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
. .+.+++.|+|||+||+++..++.++|+.++++|...+.
T Consensus 75 ~--~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 75 A--TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp H--HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred H--hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 4 24468999999999999999999999999999988774
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=98.44 E-value=0.00012 Score=77.20 Aligned_cols=223 Identities=11% Similarity=0.073 Sum_probs=129.2
Q ss_pred EEeeEEECCCCc-EEEEEEecCCCceEEEEEEEC-CCCccccccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGK-HFAYCLSKSGSDWNTLHIKDV-DTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~-~la~~~~~~G~d~~~i~v~Dl-~tg~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..++|+|||+ +|+.+.. + ..|++||+ .+++...... .......+.|+| ++.|+....
T Consensus 58 ~v~~~~~~~~~~~~l~~~~~-d----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~----------- 120 (342)
T 1yfq_A 58 PLLCCNFIDNTDLQIYVGTV-Q----GEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASW----------- 120 (342)
T ss_dssp CEEEEEEEESSSEEEEEEET-T----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEET-----------
T ss_pred ceEEEEECCCCCcEEEEEcC-C----CeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcC-----------
Confidence 477899999999 8876653 2 35999999 8887644333 333345889999 777776552
Q ss_pred ccccCCceEEEEEcCC---------CCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC-CCCC
Q psy2521 286 TTAHMGQKIYYHVLGT---------EQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-LPDG 355 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt---------~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~-g~~~ 355 (783)
...|+++++.+ .... ..+. .......+.|+|++ ++... ....|.++|+.+ +..
T Consensus 121 -----d~~i~iwd~~~~~~~~~~~~~~~~--~~~~---~~~~v~~~~~~~~~--l~~~~----~d~~i~i~d~~~~~~~- 183 (342)
T 1yfq_A 121 -----DGLIEVIDPRNYGDGVIAVKNLNS--NNTK---VKNKIFTMDTNSSR--LIVGM----NNSQVQWFRLPLCEDD- 183 (342)
T ss_dssp -----TSEEEEECHHHHTTBCEEEEESCS--SSSS---SCCCEEEEEECSSE--EEEEE----STTEEEEEESSCCTTC-
T ss_pred -----CCeEEEEcccccccccccccCCee--eEEe---eCCceEEEEecCCc--EEEEe----CCCeEEEEECCccccc-
Confidence 23577777654 2111 1111 12234678899988 44332 225899999976 311
Q ss_pred cccCCCCceeeecCcccee-E-EEEe-eCCEEEEEECCCCCCceEEEEcCCCC--C--CCCcEEeecCCC-------Cce
Q psy2521 356 KISGKFPLKTVIPGMDHHH-E-IIAN-NGPELIVKTTKNAPKGKVVTINLNNP--C--EKNWKTLIPEDE-------NRT 421 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~~~-~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~--~--~~~~~~li~~~~-------~~~ 421 (783)
............. . .|+| +++.|+..+.. +.+..++++.. . ......+..+.. ...
T Consensus 184 ------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 184 ------NGTIEESGLKYQIRDVALLPKEQEGYACSSID----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp ------CCEEEECSCSSCEEEEEECSGGGCEEEEEETT----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred ------cceeeecCCCCceeEEEECCCCCCEEEEEecC----CcEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence 1111222222222 2 5888 88877765542 34666565543 0 012233333321 113
Q ss_pred EEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEE
Q psy2521 422 LDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFY 480 (783)
Q Consensus 422 l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~ 480 (783)
+..+.+..++.++++...++ .|++||+.+++.+..+... .+.+..+. +++..++.
T Consensus 254 i~~~~~s~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 254 VNSIEFSPRHKFLYTAGSDG--IISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp EEEEEECTTTCCEEEEETTS--CEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred EEEEEEcCCCCEEEEecCCc--eEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEE
Confidence 44444443355555565554 6899999888887777765 66776766 66665554
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=98.43 E-value=7.6e-05 Score=80.67 Aligned_cols=210 Identities=8% Similarity=0.016 Sum_probs=113.9
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
.++.|||||++|.++.... ...|.++| ++++.+.. .... ..+...|+++..|+....+
T Consensus 128 ~~~~~spDG~~l~v~n~~~---~~~v~viD-~t~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~d-------------- 186 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAA---GPAVGLVV-QGGSSDDQLLSSP---TCYHIHPGAPSTFYLLCAQ-------------- 186 (373)
T ss_pred cceEECCCCCEEEEEecCC---CCeEEEEE-CCCCEEeEEcCCC---ceEEEEeCCCceEEEEcCC--------------
Confidence 3689999999988764321 24699999 99987643 2111 2345567887766654221
Q ss_pred CceEEEEEcCCCCCCce----eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 291 GQKIYYHVLGTEQDKDI----PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~----~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
.++..+++ +...... .++ ....+ ....+.+++|+..+++... ...++++|+.++.. .+.. .+. +
T Consensus 187 -g~~~~vd~-~g~~~~~~~~~~~~-~~~~p-~~~~~~~~~~~~~~~~~~~----~~~v~vid~~~~~~-~v~~--~~~-~ 254 (373)
T 2mad_H 187 -GGLAKTDH-AGGAAGAGLVGAML-TAAQN-LLTQPAQANKSGRIVWPVY----SGKILQADISAAGA-TNKA--PID-A 254 (373)
T ss_pred -CCEEEEEC-CCcEEEEEeccccc-cCCcc-eeecceeEecCCEEEEEcC----CceEEEEeccCCcc-eEee--eee-e
Confidence 13444554 3221100 011 11112 2344667888877776642 24899999976311 1100 010 0
Q ss_pred ec------C-cccee--EEEEeeCCEEEEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC
Q psy2521 367 IP------G-MDHHH--EIIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 367 ~~------~-~~~~~--~~~s~dg~~l~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~ 431 (783)
.. + ...+. -.+++||+++|+..+.. .+...|+.+|+++.+ ...-++-. ..........+++
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i~~g-~~p~~i~~s~Dg~ 330 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQISLG-HDVDAISVAQDGG 330 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEEECC-CCcCeEEECCCCC
Confidence 00 0 01111 24789999999876432 123579999998765 22233332 2222223444545
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeee
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
.+++.... +...|.++|+++++.+..+
T Consensus 331 ~~l~v~~~-~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 331 PDLYALSA-GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEEcC-CCCeEEEEECCCCCEEeee
Confidence 35554432 2358999999888877663
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.43 E-value=0.00022 Score=76.59 Aligned_cols=228 Identities=11% Similarity=0.004 Sum_probs=113.7
Q ss_pred EEEECCCCccccccc---cc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcC-CCCCCceeEEec
Q psy2521 238 HIKDVDTGKDYPEVL---KN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG-TEQDKDIPVVEF 312 (783)
Q Consensus 238 ~v~Dl~tg~~~~~~~---~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lg-t~~~~d~~v~~~ 312 (783)
+.+|.++|+...... .. .....++|+|||+.||.+.. . .|..+++. ++ +-..+...
T Consensus 19 ~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~--------------~---~v~~~~~~~~g--~~~~~~~~ 79 (365)
T 1jof_A 19 VQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM--------------K---KWSSFAVKSPT--EIVHEASH 79 (365)
T ss_dssp EEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB--------------T---EEEEEEEEETT--EEEEEEEE
T ss_pred EEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc--------------c---eEEEEEECCCC--CEEEeeEe
Confidence 344566776533221 11 23467999999998875551 1 56666665 32 11122221
Q ss_pred C--CCCeeEEEEEEecCCcEEE-EEEe------cCC----CCcEEEEEECCC-CCCCcccCCCCceeeec--CccceeE-
Q psy2521 313 P--NGRSLGLHSEVTDCGRYLL-VSTS------NNT----QGSDLHYFDLHS-LPDGKISGKFPLKTVIP--GMDHHHE- 375 (783)
Q Consensus 313 ~--~~~~~~~~~~~SpDGk~l~-~~~~------~~~----~~~~l~~~dl~~-g~~~~l~~~~~~~~l~~--~~~~~~~- 375 (783)
+ ..+ ..+.+||||++|+ +..+ .+. ....+.+++++. |. +. ....... .......
T Consensus 80 ~~~g~~---~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~---~~---~~~~~~~~~~~~~~~~~ 150 (365)
T 1jof_A 80 PIGGHP---RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK---LE---KNVQNYEYQENTGIHGM 150 (365)
T ss_dssp ECCSSG---GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC---EE---EEEEEEECCTTCCEEEE
T ss_pred ecCCCC---ccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCc---Cc---ceEeeEEeCCCCcceEE
Confidence 1 112 2467899999754 3332 010 224567777653 21 10 0011110 1111122
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCC-CCCCCCcEEee-cCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCC
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLN-NPCEKNWKTLI-PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG 453 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~-~~~~~~~~~li-~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G 453 (783)
.|+|||++||+ ++.+ ...|+.++++ ++.......+- +..........+.++|+.|++....++.-.++.++..+|
T Consensus 151 ~~spdG~~l~~-~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 227 (365)
T 1jof_A 151 VFDPTETYLYS-ADLT--ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp EECTTSSEEEE-EETT--TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EECCCCCEEEE-EcCC--CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCC
Confidence 59999998765 4432 2468888876 44311111111 111122322334455556766655454444555555467
Q ss_pred cee---eeec-CCC---e---------EEEeee-ccccccEEEEEEecC--CCCceEEEEeC
Q psy2521 454 KRL---HSFP-LDL---G---------QITHIS-GRRKYNEVFYGFTSF--LQPGTIYHCNI 496 (783)
Q Consensus 454 ~~~---~~l~-~~~---g---------~v~~~s-~~~d~~~l~~~~ss~--~~P~~vy~~d~ 496 (783)
+.. ..+. ++. + .+..+. ++||++.++++-... ..|.++..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 228 MPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp CEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred cEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 642 2232 331 2 466788 899998887654432 23557888887
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.43 E-value=4e-05 Score=82.81 Aligned_cols=248 Identities=10% Similarity=0.055 Sum_probs=139.3
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCC---EEEEEEeecCCCCCCCC
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHK---GFFYNQYCDINGTADGT 284 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~---~l~y~~~~~~~~~~~g~ 284 (783)
..+..++|+| ++++|+.+. .+ ..|++||+.+++.............+.|+|++. .|+....
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~-~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSS-FD----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR---------- 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEE-TT----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES----------
T ss_pred CcEEEEEEccCCCcEEEEEe-CC----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC----------
Confidence 4578899999 666666543 22 469999999987654332222235788888653 5554441
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC-----
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG----- 359 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~----- 359 (783)
...|+++++.+... ...+... ......+.|+|+++++++.... ...|.++|+..+.. .+..
T Consensus 165 ------~~~v~~~d~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~ll~~~~~---dg~i~i~d~~~~~~-~~~~~~~~~ 230 (408)
T 4a11_B 165 ------GPKVQLCDLKSGSC--SHILQGH--RQEILAVSWSPRYDYILATASA---DSRVKLWDVRRASG-CLITLDQHN 230 (408)
T ss_dssp ------SSSEEEEESSSSCC--CEEECCC--CSCEEEEEECSSCTTEEEEEET---TSCEEEEETTCSSC-CSEECCTTT
T ss_pred ------CCeEEEEeCCCcce--eeeecCC--CCcEEEEEECCCCCcEEEEEcC---CCcEEEEECCCCCc-ccccccccc
Confidence 23578888876532 2333322 2235678999999986655443 25789999876310 0000
Q ss_pred ---CCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcE--EeecCCCCceEEEEEEeeCCE
Q psy2521 360 ---KFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWK--TLIPEDENRTLDVVAAVANNK 432 (783)
Q Consensus 360 ---~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~--~li~~~~~~~l~~~~~~~g~~ 432 (783)
................ .|+|+|+.|+..+.. +.|..+|+.++...... ..................+..
T Consensus 231 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (408)
T 4a11_B 231 GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD----NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSE 306 (408)
T ss_dssp TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSC
T ss_pred cccceeeccccccccCceeEEEEcCCCCEEEEecCC----CeEEEEECCCCccceeccccccccccccceeEEecCCCce
Confidence 0000000011222222 589998888765543 35888888765411000 000000011111111222234
Q ss_pred EEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 433 LIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 433 l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++... + ..|.+||+.+++.+..+....+.|..+.+++++..++. .+. -..+..||+
T Consensus 307 ~~~~~~-~--~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~---dg~i~iw~~ 363 (408)
T 4a11_B 307 FVFVPY-G--STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS-GSR---DCNILAWVP 363 (408)
T ss_dssp EEEEEE-T--TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE-EET---TSCEEEEEE
T ss_pred EEEEec-C--CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE-ECC---CCeEEEEeC
Confidence 444433 3 37999999888887878766667778888888876653 222 247888888
|
| >1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18 | Back alignment and structure |
|---|
Probab=98.42 E-value=5.3e-07 Score=93.84 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=73.2
Q ss_pred CCccEEEEecCCCCCcc---CCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc
Q psy2521 553 RRNPVIIYGYGGYGVSV---LPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 629 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~ 629 (783)
++.|+||++||..+... ...|.. +...|.++||.|+.+|+||. |... ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~-~~~~L~~~G~~v~~~d~~g~---g~s~----------~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFG-IPSALRRDGAQVYVTEVSQL---DTSE----------VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTT-HHHHHHHTTCCEEEECCCSS---SCHH----------HHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHH-HHHHHHhCCCEEEEEeCCCC---CCch----------hhHHHHHHHHHHHHHH
Confidence 45688999999877643 223444 34556667999999999984 4332 1245555655555543
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.+.+++.++|||+||.++..++.++|+.++++|...+.
T Consensus 71 --~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 71 --SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp --HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 23468999999999999999999999999999988773
|
| >1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19 | Back alignment and structure |
|---|
Probab=98.40 E-value=4.5e-07 Score=100.01 Aligned_cols=113 Identities=12% Similarity=0.009 Sum_probs=77.2
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|+||++||..+.. ...|...+ ..++++.+|.|+++|+||+|... +..+. ..-...-+|+.+.+++|.++.
T Consensus 66 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTA--YSQAS--QNVRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCc--cHHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 45679999999965543 22354433 34555458999999999965432 11111 011112346666777776443
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..+.+++.|+|||+||.+++.++.++|+..+.++...|.
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 356789999999999999999999999999999876664
|
| >3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.40 E-value=9.2e-07 Score=97.25 Aligned_cols=113 Identities=15% Similarity=0.153 Sum_probs=72.9
Q ss_pred CccEEEEecCCCCCccCCc-CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc---c----cCCcChHHHHHHHHHH
Q psy2521 554 RNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR---L----LKKQNCFDDFQAAAEY 625 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~---~----~~~~~~~~D~~a~~~~ 625 (783)
..|+ |+.|||.+...... .......+..+.|+.|++.|+||.|.... ...... . ..-....+|+.+.+++
T Consensus 38 g~Pi-~l~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p-~~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~ 115 (446)
T 3n2z_B 38 GGSI-LFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLP-FGDNSFKDSRHLNFLTSEQALADFAELIKH 115 (446)
T ss_dssp TCEE-EEEECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCT-TGGGGGSCTTTSTTCSHHHHHHHHHHHHHH
T ss_pred CCCE-EEEeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCC-CCccccccchhhccCCHHHHHHHHHHHHHH
Confidence 3565 55589877543211 01223344445689999999999443321 111000 0 1123457888888888
Q ss_pred HHHcC-CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 626 MINKK-YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 626 l~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
|..+. .....++.++||||||.++++++.++|+++.++|+.++
T Consensus 116 l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 116 LKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 87641 12235899999999999999999999999999988654
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.38 E-value=0.00039 Score=73.64 Aligned_cols=236 Identities=13% Similarity=0.127 Sum_probs=131.4
Q ss_pred EEEeeEEECCC---CcEEEEEEecCCCceEEEEEEECCC-Cccccccc--cccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 209 TALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDT-GKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 209 ~~l~~~~~SPD---G~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
-.+..++|||| |++|+.+... ..|++||+.+ +..+.... .......++|+||++.|+....
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-------- 106 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-------- 106 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--------
T ss_pred CceEEEEEcCCCCCceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC--------
Confidence 44888999999 6888765432 4699999987 54432222 2223468899999998886652
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE--ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV--TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~--SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
...|.++++.+.. ...+... . .....+.| +|||++|+.... ...|+++|+.++.
T Consensus 107 --------dg~v~iwd~~~~~--~~~~~~~-~--~~v~~~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~------- 162 (368)
T 3mmy_A 107 --------DKTAKMWDLSSNQ--AIQIAQH-D--APVKTIHWIKAPNYSCVMTGSW----DKTLKFWDTRSSN------- 162 (368)
T ss_dssp --------TSEEEEEETTTTE--EEEEEEC-S--SCEEEEEEEECSSCEEEEEEET----TSEEEEECSSCSS-------
T ss_pred --------CCcEEEEEcCCCC--ceeeccc-c--CceEEEEEEeCCCCCEEEEccC----CCcEEEEECCCCc-------
Confidence 2368888887653 1222222 2 23456788 999998875433 2579999998731
Q ss_pred CCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCC----EEEEE
Q psy2521 361 FPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANN----KLIVH 436 (783)
Q Consensus 361 ~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~----~l~~~ 436 (783)
....+.. .. ....+...+..+++.+.. ..+..+++..... .+..+.... ........+.... ..++.
T Consensus 163 -~~~~~~~-~~-~~~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (368)
T 3mmy_A 163 -PMMVLQL-PE-RCYCADVIYPMAVVATAE----RGLIVYQLENQPS-EFRRIESPL-KHQHRCVAIFKDKQNKPTGFAL 233 (368)
T ss_dssp -CSEEEEC-SS-CEEEEEEETTEEEEEEGG----GCEEEEECSSSCE-EEEECCCSC-SSCEEEEEEEECTTSCEEEEEE
T ss_pred -EEEEEec-CC-CceEEEecCCeeEEEeCC----CcEEEEEeccccc-hhhhccccc-cCCCceEEEcccCCCCCCeEEE
Confidence 1122221 12 222345556666655443 3467777765331 122221111 1222222222111 22455
Q ss_pred EecCCeeEEEEEECCCC---ceeeeecCCCe------------EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 437 YIQNVRSVMDLHDLNTG---KRLHSFPLDLG------------QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 437 ~~~~g~~~l~~~dl~~G---~~~~~l~~~~g------------~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
...++ .|.+|++..+ +.+..+..... .+..+.+++++..++.... -..+..||+
T Consensus 234 ~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~----dg~i~iwd~ 302 (368)
T 3mmy_A 234 GSIEG--RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS----DGRFSFWDK 302 (368)
T ss_dssp EETTS--EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEET----TSCEEEEET
T ss_pred ecCCC--cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEcc----CCeEEEEEC
Confidence 55554 6778888554 22233333221 4777888888876654332 246999998
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=98.38 E-value=0.00034 Score=73.45 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=131.7
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc---c-cccc--ccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY---P-EVLK--NVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~---~-~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
-.+..++|||++..++++.+.+ .+|++||+.+.... + .++. ......++|+|||+.|+-...
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D----~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~-------- 85 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRD----KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW-------- 85 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETT----SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET--------
T ss_pred ceEEEEEccCCCccEEEEecCC----ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC--------
Confidence 3477889999874344444332 46899998654321 0 1111 112356899999998776552
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
...|.++++.+.. ....+.... .....+.++|++++|+-... ...|.++|+.+. .
T Consensus 86 --------D~~v~~wd~~~~~--~~~~~~~h~--~~v~~~~~~~~~~~l~s~s~----D~~i~vwd~~~~---~------ 140 (319)
T 3frx_A 86 --------DKTLRLWDVATGE--TYQRFVGHK--SDVMSVDIDKKASMIISGSR----DKTIKVWTIKGQ---C------ 140 (319)
T ss_dssp --------TSEEEEEETTTTE--EEEEEECCS--SCEEEEEECTTSCEEEEEET----TSCEEEEETTSC---E------
T ss_pred --------CCEEEEEECCCCC--eeEEEccCC--CcEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC---e------
Confidence 2368888887653 222233222 23467899999998875432 257888898652 0
Q ss_pred ceeeecCccceeE--EEEee------CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 363 LKTVIPGMDHHHE--IIANN------GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 363 ~~~l~~~~~~~~~--~~s~d------g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
...+. +...... .+.|. +..|+..+. ...|..+|+.+... ...+..+. ..+..+.+..++.++
T Consensus 141 ~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~----d~~i~~wd~~~~~~--~~~~~~h~--~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 141 LATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGN----DKMVKAWNLNQFQI--EADFIGHN--SNINTLTASPDGTLI 211 (319)
T ss_dssp EEEEC-CCSSCEEEEEECCC------CCEEEEEET----TSCEEEEETTTTEE--EEEECCCC--SCEEEEEECTTSSEE
T ss_pred EEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeC----CCEEEEEECCcchh--heeecCCC--CcEEEEEEcCCCCEE
Confidence 11122 1121111 24443 333443332 24577888865431 12233332 234444444346666
Q ss_pred EEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++...++ .|.+||+.+++.+..+... ..+..+.++|++..++.... ..+..+++
T Consensus 212 ~s~~~dg--~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~-----~~i~v~~~ 265 (319)
T 3frx_A 212 ASAGKDG--EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATA-----TGIKVFSL 265 (319)
T ss_dssp EEEETTC--EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEET-----TEEEEEEE
T ss_pred EEEeCCC--eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcC-----CCcEEEEe
Confidence 6666664 6899999888776666654 34667778888876654332 24666666
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.7e-05 Score=79.97 Aligned_cols=246 Identities=11% Similarity=0.076 Sum_probs=121.0
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc------cccccc--ccccCeeEEeeCCCEEEEEEeecCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD------YPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGT 280 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~------~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~ 280 (783)
-.+..++|||||++||-+... .+|++||++++.. ...++. ......++|+|||+.|+-...
T Consensus 59 ~~v~~v~~sp~~~~las~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~------ 127 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFD-----STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR------ 127 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET------
T ss_pred CCEEEEEECCCCCEEEEEeCC-----CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC------
Confidence 347889999999998865432 4589999864321 001111 112357899999998776552
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
...|+++++.........+.....+......+.|+|||++|+-...+ ..|.++|+.++.
T Consensus 128 ----------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~i~iW~~~~~~------- 186 (330)
T 2hes_X 128 ----------DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD----DTVRIWKDYDDD------- 186 (330)
T ss_dssp ----------TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT----SCEEEEEEETTE-------
T ss_pred ----------CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCC-------
Confidence 23577888843322222222222222345688999999988754322 467777765420
Q ss_pred CCceeeecCcccee-E-EEEeeC--CEEEEEECCCCCCceEEEEcCCCCC---CCCcE--EeecCCCCceEEEEEEeeCC
Q psy2521 361 FPLKTVIPGMDHHH-E-IIANNG--PELIVKTTKNAPKGKVVTINLNNPC---EKNWK--TLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 361 ~~~~~l~~~~~~~~-~-~~s~dg--~~l~~~t~~~~~~~~L~~~d~~~~~---~~~~~--~li~~~~~~~l~~~~~~~g~ 431 (783)
......+.+..... . .|+|++ ..|+-.+ .+ ..|..+++.++. ...|. ..++......+..+.+.. +
T Consensus 187 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~D---~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~ 261 (330)
T 2hes_X 187 WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS-DD---STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-N 261 (330)
T ss_dssp EEEEEEECCCSSCEEEEEECCSSSSCEEEEEE-TT---SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-T
T ss_pred eeEEEEccCCCCcEEEEEecCCCCeeEEEEEe-CC---CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-C
Confidence 00111222222222 2 478873 3444322 22 234455543321 11122 122221122344444444 3
Q ss_pred EEEEEEecCCeeEEEEEECCCCce--eeee-cCCCe-EEEeeecccc-ccEEEEEEecCCCCceEEEEeC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKR--LHSF-PLDLG-QITHISGRRK-YNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~--~~~l-~~~~g-~v~~~s~~~d-~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++++...++ .|.+|+..+|+. .... ..... .+..+.+++. +..++++.+.- .++..+|+
T Consensus 262 ~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~D---g~v~~W~~ 326 (330)
T 2hes_X 262 GLIASVGADG--VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDD---GIVNFWSL 326 (330)
T ss_dssp SCEEEEETTS--CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETT---SEEEEEEC
T ss_pred CEEEEEeCCC--EEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCC---CcEEEEEe
Confidence 4555666665 567777755642 2222 22222 5666666663 22333333332 46777777
|
| >1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A | Back alignment and structure |
|---|
Probab=98.36 E-value=6.1e-07 Score=98.99 Aligned_cols=112 Identities=10% Similarity=0.049 Sum_probs=75.2
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHH-HHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISR-CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~ 630 (783)
+...|+||++||..+.. ...|...+ ..++.+.||.|+++|+||+|... +..+. ..-...-+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~ 141 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANY 141 (450)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 34579999999976544 22344433 34555448999999999965432 11111 111122346666777776432
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..+.+++.|+|||+||.+++.++.++|+ .+.++...|.
T Consensus 142 g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 142 SYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred CCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 3567899999999999999999999999 8888876654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=98.35 E-value=2.1e-05 Score=83.72 Aligned_cols=248 Identities=11% Similarity=0.047 Sum_probs=132.7
Q ss_pred EEeeEEECCC----CcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEee-CCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDN----GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTH-DHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPD----G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g 283 (783)
.+..++|||| |++|+.+.. + ..|++||+.+++.+.... .......+.|+| |++.|+....
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~-d----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--------- 136 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGS-R----GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--------- 136 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEET-T----CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---------
T ss_pred cEEEEEeccCCCCCCCEEEEecC-C----CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---------
Confidence 4778899999 667776543 2 479999999987654322 222346889999 7776665552
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc-cc---
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-IS--- 358 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~-l~--- 358 (783)
...|+++++.+.. ....+.. .........+.|+|||++|+....+ ..|.++|+.++.... +.
T Consensus 137 -------dg~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~ 203 (366)
T 3k26_A 137 -------DHALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD----HSLKLWRINSKRMMNAIKESY 203 (366)
T ss_dssp -------TSCEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT----SCEEEEESCSHHHHHHHHHHH
T ss_pred -------CCeEEEEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecCC----CCEEEEECCCCccccccceeE
Confidence 2358888886542 2223311 1222345789999999998765432 578999987631000 00
Q ss_pred ---CC------------CCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC---------C---cE
Q psy2521 359 ---GK------------FPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK---------N---WK 411 (783)
Q Consensus 359 ---~~------------~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~---------~---~~ 411 (783)
.+ .+..............+...++.|+..+. .+.|..+|+.+.... . ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T 3k26_A 204 DYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSC----ENAIVCWKPGKMEDDIDKIKPSESNVTILG 279 (366)
T ss_dssp TCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECS----SSEEEEEEESSTTCCGGGCCTTCCCEEEEE
T ss_pred EecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEec----CCEEEEEeCCCccccccccccCCcchheec
Confidence 00 00000000011111112222665544322 345777777654310 0 11
Q ss_pred EeecCCCCceEEEEEEeeC--CEEEEEEecCCeeEEEEEECCCCcee----eeecCC--CeEEEeeeccccccEEEEEEe
Q psy2521 412 TLIPEDENRTLDVVAAVAN--NKLIVHYIQNVRSVMDLHDLNTGKRL----HSFPLD--LGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 412 ~li~~~~~~~l~~~~~~~g--~~l~~~~~~~g~~~l~~~dl~~G~~~----~~l~~~--~g~v~~~s~~~d~~~l~~~~s 483 (783)
.+..+. .. +..+.+..+ +.+++....++ .|++||+.+++.. ..+... .+.+..+.+++++..++...
T Consensus 280 ~~~~~~-~~-v~~~~~s~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~- 354 (366)
T 3k26_A 280 RFDYSQ-CD-IWYMRFSMDFWQKMLALGNQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC- 354 (366)
T ss_dssp EEECSS-CC-SSCCCCEECTTSSEEEEECTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE-
T ss_pred cccccC-Cc-EEEEEEcCCCCCcEEEEEecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe-
Confidence 111111 11 112222222 44555555554 6899999776532 245443 46677888888887665332
Q ss_pred cCCCCceEEEEeC
Q psy2521 484 SFLQPGTIYHCNI 496 (783)
Q Consensus 484 s~~~P~~vy~~d~ 496 (783)
.-..++.||+
T Consensus 355 ---~dg~i~iwd~ 364 (366)
T 3k26_A 355 ---DDASIWRWDR 364 (366)
T ss_dssp ---TTSEEEEEEC
T ss_pred ---CCCEEEEEEe
Confidence 2357888887
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=0.00024 Score=73.76 Aligned_cols=251 Identities=11% Similarity=0.098 Sum_probs=135.9
Q ss_pred EeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-cc--ccccCeeEEeeCCCEEEEEE
Q psy2521 197 FLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK--NVKFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 197 llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~--~~~~~~~~WspDg~~l~y~~ 273 (783)
+||...+..+ +.+.-++||+++ .||.+.+ .+|+|||+++|+.+... .. ......++|+|||+.|+-..
T Consensus 16 vldap~~~~d--~y~~~l~WS~~~-~lAvg~D------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs 86 (318)
T 4ggc_A 16 ILDAPEIRND--YYLNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT 86 (318)
T ss_dssp EEECTTCCCC--TTCBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE
T ss_pred EeeCCCCccc--ccceEEEECCCC-EEEEEeC------CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE
Confidence 4574444333 223558899997 7887653 36999999999865422 11 11235789999999887655
Q ss_pred eecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCC
Q psy2521 274 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLP 353 (783)
Q Consensus 274 ~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~ 353 (783)
. ...|.++++.+.. ....+.... .. ...++++++.++.... ...+.+++...+
T Consensus 87 ~----------------Dg~v~iw~~~~~~--~~~~~~~h~--~~--~~~~~~~~~~l~s~~~----~~~~~~~~~~~~- 139 (318)
T 4ggc_A 87 S----------------SAEVQLWDVQQQK--RLRNMTSHS--AR--VGSLSWNSYILSSGSR----SGHIHHHDVRVA- 139 (318)
T ss_dssp T----------------TSEEEEEETTTTE--EEEEEECCS--SC--EEEEEEETTEEEEEET----TSEEEEEETTSS-
T ss_pred C----------------CCcEEEeecCCce--eEEEecCcc--ce--EEEeecCCCEEEEEec----CCceEeeecCCC-
Confidence 2 2368888887642 222222221 11 2356777887664322 245666666552
Q ss_pred CCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCC-cEEeecCCCCceEEEEEEeeCC
Q psy2521 354 DGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN-WKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 354 ~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~-~~~li~~~~~~~l~~~~~~~g~ 431 (783)
......+......... .+.++|+.|+..+.. +.|..+|+.+++... ...........+........+.
T Consensus 140 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 140 ------EHHVATLSGHSQEVCGLRWAPDGRHLASGGND----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp ------SCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST
T ss_pred ------ceeEEEEcCccCceEEEEEcCCCCEEEEEecC----cceeEEECCCCcccccceeeecccCCceEEEEecCCCC
Confidence 1111112221121222 477888776654332 347778887643211 1122222223333333334445
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++..........|.+|+...+......... ..+......++++.++....+ .-..++.+|+
T Consensus 210 ~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~sg~--~d~~i~iwd~ 271 (318)
T 4ggc_A 210 NVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGF--AQNQLVIWKY 271 (318)
T ss_dssp TEEEEEECTTTCEEEEEETTTCCEEEEEECS-SCEEEEEEETTTTEEEEEECT--TTCCEEEEET
T ss_pred cEEEEEecCCCCEEEEEecccccccccccce-eeeeeeeecccccceEEEEEc--CCCEEEEEEC
Confidence 5655555555567899998766554333332 234445556677766654322 2357899998
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.4e-05 Score=97.13 Aligned_cols=238 Identities=15% Similarity=0.141 Sum_probs=140.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..++|||||++||.+.. + .+|++||+.+++.+.... .......++|+|||+.|+....
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~-d----~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------------- 677 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGA-D----KTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA------------- 677 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------------
T ss_pred ccEEEEEECCCCCEEEEEeC-C----CeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-------------
Confidence 34788999999999986643 2 369999999998654221 2223357999999998876652
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|.+|++.++. .+..+... ......+.|+|++...++.+.. ....|.++|+.++. .....
T Consensus 678 ---d~~v~vwd~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~~~l~sg~--~d~~v~vwd~~~~~---------~~~~~ 739 (1249)
T 3sfz_A 678 ---DKKVKIWDSATGK--LVHTYDEH--SEQVNCCHFTNKSNHLLLATGS--NDFFLKLWDLNQKE---------CRNTM 739 (1249)
T ss_dssp ---TSEEEEEETTTCC--EEEEEECC--SSCEEEEEECSSSSCCEEEEEE--TTSCEEEEETTSSS---------EEEEE
T ss_pred ---CCeEEEEECCCCc--eEEEEcCC--CCcEEEEEEecCCCceEEEEEe--CCCeEEEEECCCcc---------hhhee
Confidence 2368888987653 22333332 2335678999976544333322 23579999998741 11122
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC-----------CCCceEEEE-EEeeCCEE
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-----------DENRTLDVV-AAVANNKL 433 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~-----------~~~~~l~~~-~~~~g~~l 433 (783)
.+...... .|+|+|+.|+..+.. +.|..+|+.++.. ...+... .....+..+ +..+++.+
T Consensus 740 ~~h~~~v~~~~~sp~~~~l~s~s~d----g~v~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 740 FGHTNSVNHCRFSPDDELLASCSAD----GTLRLWDVRSANE--RKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEESS----SEEEEEEGGGTEE--EEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred cCCCCCEEEEEEecCCCEEEEEECC----CeEEEEeCCCCcc--cceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 22222222 589999977765543 4577788765431 1111100 001112222 33443444
Q ss_pred EEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 434 IVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 434 ~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++.. . ..+.+||+.+++.+..+... .+.+..+.+++++..++.... -..+..+|+
T Consensus 814 ~~~~-~---~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~v~vwd~ 869 (1249)
T 3sfz_A 814 IVAA-K---NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----QYCVELWNI 869 (1249)
T ss_dssp EEEE-T---TEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----SSCEEEEET
T ss_pred EEEc-C---CcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC----CCeEEEEEc
Confidence 4443 2 46899999888776666533 455666677788776664432 246778887
|
| >1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A | Back alignment and structure |
|---|
Probab=98.32 E-value=7.8e-06 Score=84.63 Aligned_cols=105 Identities=11% Similarity=0.001 Sum_probs=63.6
Q ss_pred cEEEEecCCCCCccC-CcCcHHHHHHHHcC--CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 556 PVIIYGYGGYGVSVL-PTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 556 P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+.||++||..+.... ..|.. ....|++. |+.|+.+|+ |.|...... .+.. ....+++.+.++.+......
T Consensus 6 ~pvVllHG~~~~~~~~~~~~~-~~~~L~~~~~g~~v~~~d~-G~g~s~~~~--~~~~---~~~~~~~~~~~~~l~~~~~l 78 (279)
T 1ei9_A 6 LPLVIWHGMGDSCCNPLSMGA-IKKMVEKKIPGIHVLSLEI-GKTLREDVE--NSFF---LNVNSQVTTVCQILAKDPKL 78 (279)
T ss_dssp CCEEEECCTTCCSCCTTTTHH-HHHHHHHHSTTCCEEECCC-SSSHHHHHH--HHHH---SCHHHHHHHHHHHHHSCGGG
T ss_pred CcEEEECCCCCCCCCcccHHH-HHHHHHHHCCCcEEEEEEe-CCCCccccc--cccc---cCHHHHHHHHHHHHHhhhhc
Confidence 348889997765522 23544 34555543 889999997 744211100 1110 12223333344444332111
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCc-eeEEEEcCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPEL-YGAALILVG 668 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~l-f~a~i~~~~ 668 (783)
.+++.++||||||.++..++.++|+. .+.+|+..+
T Consensus 79 -~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 -QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp -TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred -cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 888886654
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00033 Score=72.44 Aligned_cols=230 Identities=9% Similarity=0.027 Sum_probs=132.6
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..++| |||++|+.+... ..|++||+.+++..... ........++|+||++.|+....+
T Consensus 20 ~v~~~~~-~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------- 80 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD------------- 80 (313)
T ss_dssp CEEEEEE-EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-------------
T ss_pred CcEEEEe-cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-------------
Confidence 3677888 999998865432 46999999888654322 122234689999999988877622
Q ss_pred cCCceEEEEEcCCCCCCc-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d-~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..+..+++....... ...+... ......+.+ ++++++.... ...|.++|... ....+.
T Consensus 81 ---g~i~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~--~~~~l~~~~~----d~~i~~~d~~~----------~~~~~~ 139 (313)
T 3odt_A 81 ---TMINGVPLFATSGEDPLYTLIGH--QGNVCSLSF--QDGVVISGSW----DKTAKVWKEGS----------LVYNLQ 139 (313)
T ss_dssp ---SCEEEEETTCCTTSCC-CEECCC--SSCEEEEEE--ETTEEEEEET----TSEEEEEETTE----------EEEEEE
T ss_pred ---CeEEEEEeeecCCCCcccchhhc--ccCEEEEEe--cCCEEEEEeC----CCCEEEEcCCc----------EEEecc
Confidence 246666765443211 2222222 223345555 6777765432 25788888222 011122
Q ss_pred cCccceeE-EEEe-eCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHHE-IIAN-NGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~~-~~s~-dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
........ .|.+ +++.++..+.. +.|..+|.... ...+.... ...+..+.+..++. ++....++ .|
T Consensus 140 ~~~~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~----~~~~~~~~-~~~i~~~~~~~~~~-~~~~~~dg--~i 207 (313)
T 3odt_A 140 AHNASVWDAKVVSFSENKFLTASAD----KTIKLWQNDKV----IKTFSGIH-NDVVRHLAVVDDGH-FISCSNDG--LI 207 (313)
T ss_dssp CCSSCEEEEEEEETTTTEEEEEETT----SCEEEEETTEE----EEEECSSC-SSCEEEEEEEETTE-EEEEETTS--EE
T ss_pred cCCCceeEEEEccCCCCEEEEEECC----CCEEEEecCce----EEEEeccC-cccEEEEEEcCCCe-EEEccCCC--eE
Confidence 21122222 3566 77777655432 34777773321 22232212 33444555555466 55555554 69
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+.+++.+..+....+.+..+.+++++ .++ +.+ .-..++.+|+
T Consensus 208 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~---~dg~v~iwd~ 253 (313)
T 3odt_A 208 KLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV-SCG---EDRTVRIWSK 253 (313)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE-EEE---TTSEEEEECT
T ss_pred EEEECCchhhhhhhhcCCceEEEEEEecCC-CEE-EEe---cCCEEEEEEC
Confidence 999998888877777666667788888887 333 222 2357999998
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=98.32 E-value=0.00043 Score=72.61 Aligned_cols=238 Identities=12% Similarity=0.020 Sum_probs=130.7
Q ss_pred cEEEeeEEECCCC-cEEEEEEecCCCceEEEEEEECCCCccccc----ccc--ccccCeeEEeeCCCEEEEEEeecCCCC
Q psy2521 208 TTALKLYAFSDNG-KHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----VLK--NVKFPSISWTHDHKGFFYNQYCDINGT 280 (783)
Q Consensus 208 ~~~l~~~~~SPDG-~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~----~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~ 280 (783)
.-.+..++||||+ ++|| +.+.+ .+|+|||+.+++.... ++. ......+.|+|||+.|+-...
T Consensus 38 ~~~V~~v~~sp~~~~~l~-S~s~D----~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~------ 106 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMIL-SASRD----KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW------ 106 (340)
T ss_dssp SSCEEEEEECTTCTTEEE-EEETT----SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET------
T ss_pred cCCEEEEEEeCCCCCEEE-EEcCC----CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc------
Confidence 3457889999985 5554 44333 4599999987653211 111 122357899999998876552
Q ss_pred CCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC
Q psy2521 281 ADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 281 ~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
...|+.++...... ........ .......+++++++|+.... ...+.++|+....
T Consensus 107 ----------d~~i~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~l~s~s~----d~~~~~~d~~~~~------- 161 (340)
T 4aow_A 107 ----------DGTLRLWDLTTGTT--TRRFVGHT--KDVLSVAFSSDNRQIVSGSR----DKTIKLWNTLGVC------- 161 (340)
T ss_dssp ----------TSEEEEEETTTTEE--EEEEECCS--SCEEEEEECTTSSCEEEEET----TSCEEEECTTSCE-------
T ss_pred ----------cccceEEeecccce--eeeecCCC--CceeEEEEeecCccceeecC----CCeEEEEEeCCCc-------
Confidence 22566777654321 12222222 23356778999998875432 2467788876520
Q ss_pred CCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 361 FPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 361 ~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
.......+...... .+++++...++.+.. ....|..+|+.+.. ....+..+. ..+..+.+..++.++++..
T Consensus 162 -~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~--~~~~~~~h~--~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 162 -KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCK--LKTNHIGHT--GYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp -EEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTE--EEEEECCCS--SCEEEEEECTTSSEEEEEE
T ss_pred -eEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCc--eeeEecCCC--CcEEEEEECCCCCEEEEEe
Confidence 01111111122222 466666544433321 12357778887654 122233222 3344444443356666666
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++ .|.+||+.+++.+..+... ..+..+..++++..+. .. + -..+..+|+
T Consensus 235 ~Dg--~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~-~~-~---d~~i~iwd~ 284 (340)
T 4aow_A 235 KDG--QAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWLC-AA-T---GPSIKIWDL 284 (340)
T ss_dssp TTC--EEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEEE-EE-E---TTEEEEEET
T ss_pred CCC--eEEEEEeccCceeeeecCC-ceEEeeecCCCCceee-cc-C---CCEEEEEEC
Confidence 664 6888999877776666554 2344555666654332 22 2 257889998
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.0014 Score=67.70 Aligned_cols=227 Identities=8% Similarity=0.069 Sum_probs=130.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc---cccc-cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK---DYPE-VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~---~~~~-~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..++|||||++|+.+... ..|+++++.... .+.. .........+.| +++.|+....
T Consensus 61 ~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~----------- 122 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKD-----TMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSW----------- 122 (313)
T ss_dssp CEEEEEEETTTTEEEEEETT-----SCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEET-----------
T ss_pred cEEEEEECCCCCEEEEecCC-----CeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeC-----------
Confidence 37789999999999876542 358888886643 2211 111122245666 6666665542
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|.+++. .+....+.... .....+.++| ++++++....+ ..|.++|.... ..
T Consensus 123 -----d~~i~~~d~----~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~----------~~ 177 (313)
T 3odt_A 123 -----DKTAKVWKE----GSLVYNLQAHN--ASVWDAKVVSFSENKFLTASAD----KTIKLWQNDKV----------IK 177 (313)
T ss_dssp -----TSEEEEEET----TEEEEEEECCS--SCEEEEEEEETTTTEEEEEETT----SCEEEEETTEE----------EE
T ss_pred -----CCCEEEEcC----CcEEEecccCC--CceeEEEEccCCCCEEEEEECC----CCEEEEecCce----------EE
Confidence 235777762 12223333322 2345677777 88888755432 57888884430 11
Q ss_pred eeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 365 TVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 365 ~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
.+......... .|++++. ++..+. .+.|..+|+.++. ....+..+. ..+..+.+..++. ++....+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~~~----dg~i~i~d~~~~~--~~~~~~~~~--~~i~~~~~~~~~~-l~~~~~d-- 245 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISCSN----DGLIKLVDMHTGD--VLRTYEGHE--SFVYCIKLLPNGD-IVSCGED-- 245 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEEET----TSEEEEEETTTCC--EEEEEECCS--SCEEEEEECTTSC-EEEEETT--
T ss_pred EEeccCcccEEEEEEcCCCe-EEEccC----CCeEEEEECCchh--hhhhhhcCC--ceEEEEEEecCCC-EEEEecC--
Confidence 12111222222 5888876 444332 3468889987654 122332232 3344454444344 4445555
Q ss_pred eEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..|.+||+.+++.+..+..+.+.+..+.+++++. ++ +.++ -..++.||+
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~---dg~i~iw~~ 294 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-II-VGSS---DNLVRIFSQ 294 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EE-EEET---TSCEEEEES
T ss_pred CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EE-EEeC---CCcEEEEeC
Confidence 3699999988888777877766677888888876 33 3222 357889998
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=98.30 E-value=6.2e-05 Score=83.01 Aligned_cols=242 Identities=13% Similarity=0.081 Sum_probs=134.1
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccc---cccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL---KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
-.+..++||| ||++|+- .+.+ .+|++||++++....... .......+.|+||++.|+....
T Consensus 165 ~~V~~l~f~p~~~~~l~s-~s~D----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---------- 229 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYA-SSME----GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---------- 229 (435)
T ss_dssp CCCCEEEECSSCTTEEEE-ECSS----SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS----------
T ss_pred CCEEEEEEeCCCCCEEEE-EeCC----CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC----------
Confidence 4578899999 6777653 3332 469999998875432211 1222357899999987765542
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...|+++++.+... ..+. .+......+.|+|+++.++++.+. ...|.++|+.++... ....
T Consensus 230 ------dg~i~~wd~~~~~~---~~~~--~h~~~v~~v~~~p~~~~~~~s~s~---d~~v~iwd~~~~~~~-----~~~~ 290 (435)
T 4e54_B 230 ------VGNVILLNMDGKEL---WNLR--MHKKKVTHVALNPCCDWFLATASV---DQTVKIWDLRQVRGK-----ASFL 290 (435)
T ss_dssp ------SSBEEEEESSSCBC---CCSB--CCSSCEEEEEECTTCSSEEEEEET---TSBCCEEETTTCCSS-----SCCS
T ss_pred ------CCcEeeeccCccee---EEEe--cccceEEeeeecCCCceEEEEecC---cceeeEEeccccccc-----ceEE
Confidence 23578888754321 1111 122245678999999987766543 246788898763210 0111
Q ss_pred eeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC-----ceEEEEEEeeCCEEEEEE
Q psy2521 365 TVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-----RTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 365 ~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~-----~~l~~~~~~~g~~l~~~~ 437 (783)
...+..... . .|+|+|+.|+..+.. +.|..+|+.++.. ...++.+... ..+...+..+++.+++..
T Consensus 291 -~~~~h~~~v~~~~~spdg~~l~s~~~D----~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 291 -YSLPHRHPVNAACFSPDGARLLTTDQK----SEIRVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp -BCCBCSSCEEECCBCTTSSEEEEEESS----SCEEEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC
T ss_pred -EeeeccccccceeECCCCCeeEEEcCC----CEEEEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCEEEEEE
Confidence 111112222 2 488999887754432 3577788766441 2333332211 112223333333444433
Q ss_pred ecCC---------eeEEEEEECCCCceeeeecCC-CeEEEee-eccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQNV---------RSVMDLHDLNTGKRLHSFPLD-LGQITHI-SGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~g---------~~~l~~~dl~~G~~~~~l~~~-~g~v~~~-s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++ ...|.+||..+|+.+..+..+ ...|..+ .++|++..+. +. + -..|..||+
T Consensus 364 ~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~la-sg-~---d~~i~iW~~ 428 (435)
T 4e54_B 364 YPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLA-SA-M---GYHILIWSQ 428 (435)
T ss_dssp CCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEE-EE-C---SSEEEECCC
T ss_pred cCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEE-EE-c---CCcEEEEEC
Confidence 3222 135889999889877766544 3333333 3567776554 32 2 237889998
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.00016 Score=76.66 Aligned_cols=228 Identities=14% Similarity=0.186 Sum_probs=127.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEE--eeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISW--THDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~W--spDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.+..++|||||++|+.+.. + ..|++||+.+++.+...........+.| +||++.|+....
T Consensus 88 ~v~~~~~~~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------------- 149 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASC-D----KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW------------- 149 (368)
T ss_dssp CEEEEEECTTSSEEEEEET-T----SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEET-------------
T ss_pred CEEEEEECcCCCEEEEEcC-C----CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccC-------------
Confidence 3788999999999986543 2 4799999999986654333333468899 888877765552
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|+++++.+... ...+..+. ......++ +..+++.... ..+.++++..+. .....+.
T Consensus 150 ---dg~i~vwd~~~~~~--~~~~~~~~---~~~~~~~~--~~~~~~~~~~----~~i~~~~~~~~~-------~~~~~~~ 208 (368)
T 3mmy_A 150 ---DKTLKFWDTRSSNP--MMVLQLPE---RCYCADVI--YPMAVVATAE----RGLIVYQLENQP-------SEFRRIE 208 (368)
T ss_dssp ---TSEEEEECSSCSSC--SEEEECSS---CEEEEEEE--TTEEEEEEGG----GCEEEEECSSSC-------EEEEECC
T ss_pred ---CCcEEEEECCCCcE--EEEEecCC---CceEEEec--CCeeEEEeCC----CcEEEEEecccc-------chhhhcc
Confidence 23688888876532 23333332 12333344 4455544322 467888887621 1111111
Q ss_pred cCccceeE--EEEeeCCE----EEEEECCCCCCceEEEEcCCCCCC-CCcEEeecCCCC----------ceEEEEEEeeC
Q psy2521 368 PGMDHHHE--IIANNGPE----LIVKTTKNAPKGKVVTINLNNPCE-KNWKTLIPEDEN----------RTLDVVAAVAN 430 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~----l~~~t~~~~~~~~L~~~d~~~~~~-~~~~~li~~~~~----------~~l~~~~~~~g 430 (783)
........ .+.+++.. ++..+. .+.|..+++..... .....+..+... ..+..+.+..+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 284 (368)
T 3mmy_A 209 SPLKHQHRCVAIFKDKQNKPTGFALGSI----EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPV 284 (368)
T ss_dssp CSCSSCEEEEEEEECTTSCEEEEEEEET----TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTT
T ss_pred ccccCCCceEEEcccCCCCCCeEEEecC----CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecC
Confidence 11111111 23333322 443332 34577777765421 111222222110 02444444433
Q ss_pred CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEE
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ 482 (783)
+.++++...++ .|.+||+.+++.+..+....+.+..+.+++++..++...
T Consensus 285 ~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 285 HGTLATVGSDG--RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp TCCEEEEETTS--CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEccCC--eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 55566666664 589999988888777776566788888899887766543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=98.29 E-value=5.7e-05 Score=81.13 Aligned_cols=238 Identities=8% Similarity=-0.022 Sum_probs=126.6
Q ss_pred eEEECCCCcEEEEEEe-----cCCCceEEEEEEECCCCcccccc-cc-------ccccCeeEEeeCCCEEEEEEeecCCC
Q psy2521 213 LYAFSDNGKHFAYCLS-----KSGSDWNTLHIKDVDTGKDYPEV-LK-------NVKFPSISWTHDHKGFFYNQYCDING 279 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~-----~~G~d~~~i~v~Dl~tg~~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~ 279 (783)
++.+||||+++..+.. ..|.+...|.++|+.+++.+... ++ .....++++||||+++|.....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~--- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS--- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS---
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC---
Confidence 6999999999877653 12344578999999999876532 22 12346899999999988776321
Q ss_pred CCCCCcccccCCceEEE--EEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC-----C
Q psy2521 280 TADGTETTAHMGQKIYY--HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS-----L 352 (783)
Q Consensus 280 ~~~g~~~~~~~~~~v~~--~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~-----g 352 (783)
...|.+ +++.+ +.....+.. ....|+|+..++.. . ..+.+.++|+++ +
T Consensus 146 -----------~~~v~V~~iD~~t-----v~~i~v~~~------~~~~p~g~~~~~~~-~--~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 146 -----------SAAAGLSVPGASD-----DQLTKSASC------FHIHPGAAATHYLG-S--CPASLAASDLAAAPAAAG 200 (368)
T ss_dssp -----------SCEEEEEETTTEE-----EEEEECSSC------CCCEEEETTEEECC-C--CTTSCEEEECCSSCCCCE
T ss_pred -----------CCeEEEEEEchhh-----ceEEECCCc------eEEccCCCeEEEEE-c--CCCCEEEEECccccccCC
Confidence 123444 33222 111111110 11234454433321 1 112334455543 1
Q ss_pred CCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC---CcEEe---------ecCCCCc
Q psy2521 353 PDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEK---NWKTL---------IPEDENR 420 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~---~~~~l---------i~~~~~~ 420 (783)
.... ... .. +..+.... .+++++.+++.+. ..++.+|+.+.... .|... .|.+ ..
T Consensus 201 ~v~~-~~t-~~--i~vg~~P~---~~~~~~~~~~vs~-----~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~ 267 (368)
T 1mda_H 201 IVGA-QCT-GA--QNCSSQAA---QANYPGMLVWAVA-----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAG-FQ 267 (368)
T ss_dssp ECCC-CSC-TT--SCBCSCCE---EETTTTEEEECBS-----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECS-SS
T ss_pred eEEE-Eee-ee--eeCCCCcc---ccccCCEEEEEcC-----CEEEEEECCCCcceEEEEEEeccccccccccccCc-ce
Confidence 0000 000 00 00011111 2678888888775 35888998653210 01000 0000 01
Q ss_pred eEEEEEEeeCCEEEEEEecC-C-----eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEE
Q psy2521 421 TLDVVAAVANNKLIVHYIQN-V-----RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 421 ~l~~~~~~~g~~l~~~~~~~-g-----~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~ 494 (783)
.+ ....+++++|+..... + ...+.++|+++++.+..|+.+. ...++..++|++.++++.... -.++..+
T Consensus 268 ~v--~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~--~~~VsVI 342 (368)
T 1mda_H 268 MV--AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAG--TEVLDIY 342 (368)
T ss_dssp CE--EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETT--TTEEEEE
T ss_pred ee--EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCC--CCeEEEE
Confidence 11 2334557777765523 3 3446699998888888787653 345677789988888766511 2579999
Q ss_pred eC
Q psy2521 495 NI 496 (783)
Q Consensus 495 d~ 496 (783)
|+
T Consensus 343 D~ 344 (368)
T 1mda_H 343 DA 344 (368)
T ss_dssp ES
T ss_pred EC
Confidence 99
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.28 E-value=7.4e-05 Score=82.13 Aligned_cols=210 Identities=14% Similarity=0.147 Sum_probs=116.7
Q ss_pred EEEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCC---Ccccc--ccc-cccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 209 TALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDT---GKDYP--EVL-KNVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 209 ~~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~t---g~~~~--~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
-.+..++||| ||++||-+.. ...|++||+.+ +.... .+. .......++|+||++.|+....+
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~-----dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d------ 132 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSD-----QGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD------ 132 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEET-----TSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT------
T ss_pred CceEEEEECCCCCCEEEEecC-----CceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC------
Confidence 3478899999 9999887653 25799999877 54221 111 12234689999999988766522
Q ss_pred CCCcccccCCceEEEEEcCCCC-CCceeEEe----------c--CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEE
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQ-DKDIPVVE----------F--PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~-~~d~~v~~----------~--~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~d 348 (783)
..|.++++.... .+...... . ...........+++|+++|+.... ...|.++|
T Consensus 133 ----------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~iwd 198 (437)
T 3gre_A 133 ----------GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN----LSRVIIFD 198 (437)
T ss_dssp ----------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET----TSEEEEEE
T ss_pred ----------CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC----CCeEEEEe
Confidence 246666653110 01111100 0 111111123337789998876543 26899999
Q ss_pred CCCCCCCcccCCCCceeeecC-cccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEE
Q psy2521 349 LHSLPDGKISGKFPLKTVIPG-MDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVV 425 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~-~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~ 425 (783)
+.++. ....+... ..... . .|+|+++.|+..+.. +.|..+|+..+. ....+.... ...+..+
T Consensus 199 ~~~~~--------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~~~--~~~~~~~~~-~~~v~~~ 263 (437)
T 3gre_A 199 IRTLE--------RLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRFNV--LIRSWSFGD-HAPITHV 263 (437)
T ss_dssp TTTCC--------EEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTTTE--EEEEEBCTT-CEEEEEE
T ss_pred CCCCe--------eeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCCcc--EEEEEecCC-CCceEEE
Confidence 98731 11222221 12222 2 488998877765443 458888887643 122222122 2334444
Q ss_pred EEe----eCCEEEEEEecCCeeEEEEEECCCCceeeeec
Q psy2521 426 AAV----ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 426 ~~~----~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~ 460 (783)
.+. .++.+++....++ .|.+||+.+|+.+..+.
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKT--FLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EECTTTCTTEEEEEEESTTE--EEEEEETTTTEEEEEEE
T ss_pred EeccccCCCccEEEEEcCCC--cEEEEEcCCCcEEEEEE
Confidence 221 2245666666654 79999998787655554
|
| >2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39 | Back alignment and structure |
|---|
Probab=98.28 E-value=3.6e-06 Score=76.22 Aligned_cols=96 Identities=7% Similarity=-0.035 Sum_probs=62.8
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.++..... ++.|+||++| +... .|... +++ +|.|+.+|+||.|.... . ..
T Consensus 9 ~~g~~~~~~~~--------g~~~~vv~~H-~~~~----~~~~~----l~~-~~~v~~~d~~G~G~s~~---~-----~~- 61 (131)
T 2dst_A 9 LYGLNLVFDRV--------GKGPPVLLVA-EEAS----RWPEA----LPE-GYAFYLLDLPGYGRTEG---P-----RM- 61 (131)
T ss_dssp ETTEEEEEEEE--------CCSSEEEEES-SSGG----GCCSC----CCT-TSEEEEECCTTSTTCCC---C-----CC-
T ss_pred ECCEEEEEEEc--------CCCCeEEEEc-CCHH----HHHHH----HhC-CcEEEEECCCCCCCCCC---C-----CC-
Confidence 47777644321 2357899999 2211 12221 554 79999999999553321 1 11
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
. ++++.+.+..+++. .+.+++.++|||+||.++..++.++|++
T Consensus 62 ~-~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 62 A-PEELAHFVAGFAVM--MNLGAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp C-HHHHHHHHHHHHHH--TTCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred C-HHHHHHHHHHHHHH--cCCCccEEEEEChHHHHHHHHHhcCCcE
Confidence 1 66666666665554 2446899999999999999999999964
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00012 Score=85.93 Aligned_cols=235 Identities=12% Similarity=0.056 Sum_probs=135.9
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc----ccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~----~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
.+..++++|++..+.++.+.+ .+|++||+.++.... ..+ .......++|+|||+.|+-...
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D----~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~--------- 450 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRD----KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW--------- 450 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETT----SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---------
T ss_pred eeEEEEecCCCCCEEEEEeCC----CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---------
Confidence 367789999875555554433 469999998654211 111 1122357899999998875552
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
...|.++++.+... ...+... ......+.|+|||++|+-.+. ...|.++|+.+. . .
T Consensus 451 -------Dg~v~vwd~~~~~~--~~~~~~h--~~~v~~~~~s~~~~~l~s~s~----D~~i~iwd~~~~-~--------~ 506 (694)
T 3dm0_A 451 -------DGELRLWDLAAGVS--TRRFVGH--TKDVLSVAFSLDNRQIVSASR----DRTIKLWNTLGE-C--------K 506 (694)
T ss_dssp -------TSEEEEEETTTTEE--EEEEECC--SSCEEEEEECTTSSCEEEEET----TSCEEEECTTSC-E--------E
T ss_pred -------CCcEEEEECCCCcc--eeEEeCC--CCCEEEEEEeCCCCEEEEEeC----CCEEEEEECCCC-c--------c
Confidence 23688889876532 2223322 223568899999999875432 257888887651 0 0
Q ss_pred eeeec---CccceeE--EEEeeCCE-EEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEE
Q psy2521 364 KTVIP---GMDHHHE--IIANNGPE-LIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHY 437 (783)
Q Consensus 364 ~~l~~---~~~~~~~--~~s~dg~~-l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~ 437 (783)
..+.. +...... .|+|++.. +++.... ...|..+|+.+.. ....+... ...+..+.+..++.++++.
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~---d~~v~vwd~~~~~---~~~~~~~h-~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW---DKTVKVWNLSNCK---LRSTLAGH-TGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTCC---EEEEECCC-SSCEEEEEECTTSSEEEEE
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC---CCeEEEEECCCCc---EEEEEcCC-CCCEEEEEEeCCCCEEEEE
Confidence 11111 1111122 48887642 3333333 2358888887654 23333322 2334444444446667777
Q ss_pred ecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++ .|.+||+.+|+.+..+... ..+..+.+++++..+.... . ..+..+|+
T Consensus 580 ~~Dg--~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~l~~~~-~----~~i~iwd~ 630 (694)
T 3dm0_A 580 GKDG--VVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAAT-E----HGIKIWDL 630 (694)
T ss_dssp ETTS--BCEEEETTTTEEEECCBCS-SCEEEEEECSSSSEEEEEE-T----TEEEEEET
T ss_pred eCCC--eEEEEECCCCceEEEecCC-CcEEEEEEcCCCcEEEEEc-C----CCEEEEEC
Confidence 6665 6888999888876655443 3466677778765444322 1 35889999
|
| >2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.4e-06 Score=92.60 Aligned_cols=110 Identities=10% Similarity=-0.019 Sum_probs=75.6
Q ss_pred CccEEEEecCCCCCcc--------CCcC----cHHHHHHHHcCCEE---EEEecCCCCCCCChhHHhhccccCCcChHHH
Q psy2521 554 RNPVIIYGYGGYGVSV--------LPTF----SISRCMFLRHFNGI---YAIPNIRGGGELGEDWHNAGRLLKKQNCFDD 618 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~--------~~~~----~~~~~~~l~~~G~~---v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D 618 (783)
..+.||++||..+... ...| .. +...|.++||. |+.+|+||.|. .-... .........++
T Consensus 39 ~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~-l~~~L~~~Gy~~~~V~~~D~~g~G~---S~~~~-~~~~~~~~~~~ 113 (342)
T 2x5x_A 39 TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARS-VYAELKARGYNDCEIFGVTYLSSSE---QGSAQ-YNYHSSTKYAI 113 (342)
T ss_dssp CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSC-HHHHHHHTTCCTTSEEEECCSCHHH---HTCGG-GCCBCHHHHHH
T ss_pred CCCeEEEECCcCCCcccccccccccccccccHHH-HHHHHHhCCCCCCeEEEEeCCCCCc---cCCcc-ccCCHHHHHHH
Confidence 3455888999876431 2334 43 34555557998 99999999432 11000 01112344678
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 619 FQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 619 ~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
+.+.++.++++. ..+++.|+||||||+++..++.++ |+.++.+|+..|..
T Consensus 114 l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 114 IKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 888888887652 346899999999999999999888 89999999987754
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.24 E-value=0.0002 Score=76.28 Aligned_cols=205 Identities=10% Similarity=0.087 Sum_probs=112.9
Q ss_pred EEEeeEEECCC--CcEEEEEEecCCCceEEEEEEECCCCcc--cc-ccccccccCeeEEeeC--CCEEEEEEeecCCCCC
Q psy2521 209 TALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKD--YP-EVLKNVKFPSISWTHD--HKGFFYNQYCDINGTA 281 (783)
Q Consensus 209 ~~l~~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~--~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~ 281 (783)
..+..++|||+ |++|+.+.. + ..|++||+.+++. +. ..........++|+|+ ++.|+....
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~-d----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~------- 123 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSY-D----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS------- 123 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------
T ss_pred CcEEEEEeCCCCCCCEEEEecc-C----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-------
Confidence 34788999988 888876543 2 3599999998862 21 1112223468999999 887776662
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-------------CCcEEEEEEecCCCCcEEEEEE
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-------------CGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-------------DGk~l~~~~~~~~~~~~l~~~d 348 (783)
...|.++++.+........+.... .....+.|+| |+++|+....+ ..|+++|
T Consensus 124 ---------d~~i~v~d~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d 188 (379)
T 3jrp_A 124 ---------DGKVSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWK 188 (379)
T ss_dssp ---------TSEEEEEECCTTSCCCEEEEECCT--TCEEEEEECCCC----------CTTCEEEEEETT----SCEEEEE
T ss_pred ---------CCcEEEEecCCCCceeeEEecCCC--CceEEEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEE
Confidence 236888888765433333333322 2346789999 68888765433 4788888
Q ss_pred CCCCCCCcccCCCCceeeecCcccee-E-EEEee---CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-CCceE
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDHHH-E-IIANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTL 422 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~d---g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~~~~l 422 (783)
+.++.. . ......+.+..... . .|+|+ ++.|+..+ .+ +.|..+|+..+.......+.... ....+
T Consensus 189 ~~~~~~-~----~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v 259 (379)
T 3jrp_A 189 YNSDAQ-T----YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS-QD---RTCIIWTQDNEQGPWKKTLLKEEKFPDVL 259 (379)
T ss_dssp EETTTT-E----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE-TT---SCEEEEEESSTTSCCEEEESSSSCCSSCE
T ss_pred ecCCCc-c----eeeEEEEecccCcEeEEEECCCCCCCCeEEEEe-CC---CEEEEEeCCCCCccceeeeeccccCCCcE
Confidence 876310 0 00111122222222 2 58999 55555433 32 34777777654321112333221 12333
Q ss_pred EEEEEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 423 DVVAAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 423 ~~~~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
..+.+..++.+++....++ .|++|++.
T Consensus 260 ~~~~~s~~g~~l~~~~~dg--~i~iw~~~ 286 (379)
T 3jrp_A 260 WRASWSLSGNVLALSGGDN--KVTLWKEN 286 (379)
T ss_dssp EEEEECSSSCCEEEEESSS--SEEEEEEE
T ss_pred EEEEEcCCCCEEEEecCCC--cEEEEeCC
Confidence 3444433344555555565 46666664
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.23 E-value=0.00022 Score=74.22 Aligned_cols=232 Identities=9% Similarity=0.075 Sum_probs=122.0
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 241 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~D 241 (783)
.+.++++.+|+.-... ..|++.+..++..+. +... ..+..+.++|||++++ +. . ..|+++|
T Consensus 19 ~w~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~-~~~~-------~~~~~i~~~~dG~l~v-~~-~-----~~l~~~d 79 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPA----KKVCRWDSFTKQVQR-VTMD-------APVSSVALRQSGGYVA-TI-G-----TKFCALN 79 (297)
T ss_dssp EEETTTTEEEEEETTT----TEEEEEETTTCCEEE-EECS-------SCEEEEEEBTTSSEEE-EE-T-----TEEEEEE
T ss_pred eEECCCCEEEEEECCC----CEEEEEECCCCcEEE-EeCC-------CceEEEEECCCCCEEE-EE-C-----CeEEEEE
Confidence 3444567777764322 456766654444333 2221 1267789999999443 32 1 3599999
Q ss_pred CCCCccccccc-----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC
Q psy2521 242 VDTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR 316 (783)
Q Consensus 242 l~tg~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~ 316 (783)
.++|+...... .......+.++|||+ |+++........ .........||+++.+. ....+.....
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~----~~~~~~~~~l~~~d~~g---~~~~~~~~~~-- 149 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAP----AVLERHQGALYSLFPDH---HVKKYFDQVD-- 149 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBT----TBCCTTCEEEEEECTTS---CEEEEEEEES--
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCccccc----ccccCCCcEEEEEECCC---CEEEEeeccc--
Confidence 99887543221 112235688999997 777664321000 00011234677776532 1222332211
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC--CCCCCcccCCCCceeeecCc--cceeE---EEEeeCCEEEEEEC
Q psy2521 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH--SLPDGKISGKFPLKTVIPGM--DHHHE---IIANNGPELIVKTT 389 (783)
Q Consensus 317 ~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~--~g~~~~l~~~~~~~~l~~~~--~~~~~---~~s~dg~~l~~~t~ 389 (783)
.-.++.|||||++|++.... ...|++++++ +| .+. ....+... ..... .++++| .||+...
T Consensus 150 -~pngi~~spdg~~lyv~~~~---~~~i~~~~~d~~~G---~~~----~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~ 217 (297)
T 3g4e_A 150 -ISNGLDWSLDHKIFYYIDSL---SYSVDAFDYDLQTG---QIS----NRRSVYKLEKEEQIPDGMCIDAEG-KLWVACY 217 (297)
T ss_dssp -BEEEEEECTTSCEEEEEEGG---GTEEEEEEECTTTC---CEE----EEEEEEECCGGGCEEEEEEEBTTS-CEEEEEE
T ss_pred -cccceEEcCCCCEEEEecCC---CCcEEEEeccCCCC---ccc----CcEEEEECCCCCCCCCeeEECCCC-CEEEEEc
Confidence 23578999999998766432 3689998864 32 111 01111111 11111 467776 5776554
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE--eeCCEEEEEEecCC
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA--VANNKLIVHYIQNV 441 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~--~~g~~l~~~~~~~g 441 (783)
. ..+|+++|.++++ ....++-.... ...+.+ .+++.|+++....+
T Consensus 218 ~---~~~v~~~d~~tG~---~~~~i~~p~~~-~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 218 N---GGRVIRLDPVTGK---RLQTVKLPVDK-TTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp T---TTEEEEECTTTCC---EEEEEECSSSB-EEEEEEESGGGCEEEEEEBCTT
T ss_pred C---CCEEEEEcCCCce---EEEEEECCCCC-ceEEEEeCCCCCEEEEEcCCcC
Confidence 3 2469999987554 23333322122 333443 34467887776554
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=98.23 E-value=6e-05 Score=80.04 Aligned_cols=156 Identities=12% Similarity=0.046 Sum_probs=93.3
Q ss_pred EEEeeEEECCC---CcEEEEEEecCCCceEEEEEEECCCCccccccc------cccccCeeEEeeCC----CEEEEEEee
Q psy2521 209 TALKLYAFSDN---GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL------KNVKFPSISWTHDH----KGFFYNQYC 275 (783)
Q Consensus 209 ~~l~~~~~SPD---G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~------~~~~~~~~~WspDg----~~l~y~~~~ 275 (783)
-.+..++|||+ |..++++....| .|++||+.+++.+.... .......++|+||+ +.|+....
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~- 93 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS- 93 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET-
T ss_pred CceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC-
Confidence 34788999985 665555554333 59999999876543211 11224678999994 44544431
Q ss_pred cCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-CCcEEEEEEecCCCCcEEEEEECCCCCC
Q psy2521 276 DINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-CGRYLLVSTSNNTQGSDLHYFDLHSLPD 354 (783)
Q Consensus 276 ~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-DGk~l~~~~~~~~~~~~l~~~dl~~g~~ 354 (783)
...|.++++.+.. .+..+... ......+.|+| |++.|+.... ...|.++|+.++.
T Consensus 94 ---------------dg~i~v~d~~~~~--~~~~~~~~--~~~i~~~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~- 149 (366)
T 3k26_A 94 ---------------RGIIRIINPITMQ--CIKHYVGH--GNAINELKFHPRDPNLLLSVSK----DHALRLWNIQTDT- 149 (366)
T ss_dssp ---------------TCEEEEECTTTCC--EEEEEESC--CSCEEEEEECSSCTTEEEEEET----TSCEEEEETTTTE-
T ss_pred ---------------CCEEEEEEchhce--EeeeecCC--CCcEEEEEECCCCCCEEEEEeC----CCeEEEEEeecCe-
Confidence 2368888887542 22333322 22456889999 8888875433 2579999998731
Q ss_pred CcccCCCCceeee---cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCC
Q psy2521 355 GKISGKFPLKTVI---PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNP 405 (783)
Q Consensus 355 ~~l~~~~~~~~l~---~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~ 405 (783)
....+ ........ .|+|+++.|+..+.. +.|..+|+.++
T Consensus 150 --------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~ 193 (366)
T 3k26_A 150 --------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD----HSLKLWRINSK 193 (366)
T ss_dssp --------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT----SCEEEEESCSH
T ss_pred --------EEEEecccccccCceeEEEECCCCCEEEEecCC----CCEEEEECCCC
Confidence 11122 22222222 588998877765442 45888887653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=98.22 E-value=5.5e-05 Score=83.42 Aligned_cols=205 Identities=5% Similarity=-0.001 Sum_probs=112.7
Q ss_pred EeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccc-cc--cccccCeeEEee-CCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL--KNVKFPSISWTH-DHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~--~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..++||| +++.||.+.. + .+|+|||+.+++.... .. .......++|+| |++.|+ +...
T Consensus 122 V~~l~~~P~~~~~lasGs~-d----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~-s~s~---------- 185 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSK-G----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY-ASSM---------- 185 (435)
T ss_dssp EEEEEECSSCTTCEEEEET-T----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE-EECS----------
T ss_pred EEEEEEeCCCCCEEEEEeC-C----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE-EEeC----------
Confidence 67899999 5667776543 2 3599999988764321 11 222346899998 555554 4421
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|.++++.+.. -..+........+...+.++|||++|+... ....|+++|+.+.. ...
T Consensus 186 -----D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~----~dg~i~~wd~~~~~---------~~~ 245 (435)
T 4e54_B 186 -----EGTTRLQDFKGNI--LRVFASSDTINIWFCSLDVSASSRMVVTGD----NVGNVILLNMDGKE---------LWN 245 (435)
T ss_dssp -----SSCEEEEETTSCE--EEEEECCSSCSCCCCCEEEETTTTEEEEEC----SSSBEEEEESSSCB---------CCC
T ss_pred -----CCEEEEeeccCCc--eeEEeccCCCCccEEEEEECCCCCEEEEEe----CCCcEeeeccCcce---------eEE
Confidence 2357778876432 112222222222345688999999987543 23579999987621 111
Q ss_pred eecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC-CcEEeecCCCCceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~-~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
+ .+..... . .|+|+++.+++....+ ..|..+|+...... .......+. ..+..+.+..++..+++...++
T Consensus 246 ~-~~h~~~v~~v~~~p~~~~~~~s~s~d---~~v~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~spdg~~l~s~~~D~- 318 (435)
T 4e54_B 246 L-RMHKKKVTHVALNPCCDWFLATASVD---QTVKIWDLRQVRGKASFLYSLPHR--HPVNAACFSPDGARLLTTDQKS- 318 (435)
T ss_dssp S-BCCSSCEEEEEECTTCSSEEEEEETT---SBCCEEETTTCCSSSCCSBCCBCS--SCEEECCBCTTSSEEEEEESSS-
T ss_pred E-ecccceEEeeeecCCCceEEEEecCc---ceeeEEecccccccceEEEeeecc--ccccceeECCCCCeeEEEcCCC-
Confidence 1 1112222 2 4888888776655443 34666777653311 111111222 2333333332245555555554
Q ss_pred eEEEEEECCCCceeeee
Q psy2521 443 SVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l 459 (783)
.|.+||+.+++....+
T Consensus 319 -~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 319 -EIRVYSASQWDCPLGL 334 (435)
T ss_dssp -CEEEEESSSSSSEEEE
T ss_pred -EEEEEECCCCccceEE
Confidence 5888999777654443
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=98.21 E-value=0.001 Score=68.95 Aligned_cols=241 Identities=12% Similarity=0.055 Sum_probs=126.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc-cccccc--ccccCeeEEeeC--CCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD-YPEVLK--NVKFPSISWTHD--HKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~-~~~~~~--~~~~~~~~WspD--g~~l~y~~~~~~~~~~~g~ 284 (783)
.+..++|||||++||-+... .+|++||++++.. ...++. ......++|+|+ |+.|+-...
T Consensus 11 ~V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---------- 75 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---------- 75 (297)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET----------
T ss_pred ceEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC----------
Confidence 47789999999999866432 4699999976432 111222 122357899874 666654442
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD--Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
...|.++++.++.......+... ......+.|+|+ |++|+.... ...|.++|+.++.. ..
T Consensus 76 ------D~~v~iWd~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~g~~l~s~s~----d~~v~~wd~~~~~~------~~ 137 (297)
T 2pm7_B 76 ------DGKVMIWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPMLLVASS----DGKVSVVEFKENGT------TS 137 (297)
T ss_dssp ------TTEEEEEEBSSSCBCCCEEECCC--SSCEEEEEECCGGGCSEEEEEET----TSEEEEEEBCSSSC------BC
T ss_pred ------CCEEEEEEcCCCceEEEEEeecC--CCceeEEEeCcCCCCcEEEEEEC----CCcEEEEEecCCCc------ee
Confidence 23688888876532222333322 223567899998 888775432 25788999876210 00
Q ss_pred ceeeecCccceeE--EEEee-------------CCEEEEEECCCCCCceEEEEcCCCCCCCCcE--EeecCCCCceEEEE
Q psy2521 363 LKTVIPGMDHHHE--IIANN-------------GPELIVKTTKNAPKGKVVTINLNNPCEKNWK--TLIPEDENRTLDVV 425 (783)
Q Consensus 363 ~~~l~~~~~~~~~--~~s~d-------------g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~--~li~~~~~~~l~~~ 425 (783)
. ....+...... .|+|+ ++.|+. ...+ ..|..+|+.++.. .+. ..+... ...+..+
T Consensus 138 ~-~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s-gs~D---~~v~lwd~~~~~~-~~~~~~~l~~H-~~~V~~v 210 (297)
T 2pm7_B 138 P-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT-GGAD---NLVKIWKYNSDAQ-TYVLESTLEGH-SDWVRDV 210 (297)
T ss_dssp C-EEEECCSSCEEEEEECCCC------------CCEEEE-EETT---SCEEEEEEETTTT-EEEEEEEECCC-SSCEEEE
T ss_pred e-eeeecccCccceEeecCCcccccccCCCCCCcceEEE-EcCC---CcEEEEEEcCCCc-eEEEEEEecCC-CCceEEE
Confidence 1 12222222222 47775 334443 3322 3466666654321 111 122222 2233444
Q ss_pred EEeeC---CEEEEEEecCCeeEEEEEECCCCc--e-eeeec--CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 426 AAVAN---NKLIVHYIQNVRSVMDLHDLNTGK--R-LHSFP--LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 426 ~~~~g---~~l~~~~~~~g~~~l~~~dl~~G~--~-~~~l~--~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+ +.++++...|+ .|.+||+.+++ . ...+. ...+.+..+.+++++..++.... . ..+..++.
T Consensus 211 ~~sp~~~~~~~las~s~D~--~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~--D--~~v~lw~~ 283 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG--D--NKVTLWKE 283 (297)
T ss_dssp EECCCCSSSEEEEEEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET--T--SCEEEEEE
T ss_pred EECCCCCCceEEEEEECCC--cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC--C--CcEEEEEE
Confidence 44332 36677777775 57777775432 1 12221 11345667778888876653322 2 24555555
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.21 E-value=0.00017 Score=76.39 Aligned_cols=232 Identities=11% Similarity=0.063 Sum_probs=127.0
Q ss_pred CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEE
Q psy2521 219 NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 298 (783)
Q Consensus 219 DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~ 298 (783)
++++|..+...+ ..|.++|+++++.+...........+++++|| .+|.+.. ....|++++
T Consensus 52 ~~~~lyv~~~~~----~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~---------------~~~~v~~iD 111 (328)
T 3dsm_A 52 RDGIGWIVVNNS----HVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQI---------------WDYRIFIIN 111 (328)
T ss_dssp ETTEEEEEEGGG----TEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEB---------------SCSEEEEEE
T ss_pred ECCEEEEEEcCC----CEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEEC---------------CCCeEEEEE
Confidence 566665554422 46999999999875422222233578899998 5655541 124677777
Q ss_pred cCCCCCCceeEEecCC------CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc
Q psy2521 299 LGTEQDKDIPVVEFPN------GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372 (783)
Q Consensus 299 lgt~~~~d~~v~~~~~------~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~ 372 (783)
+.+.... ....... .+ .++.+ ++++|++.... ..+.|.++|++++. + ...+..+...
T Consensus 112 ~~t~~~~--~~i~~g~~~~~~~~p---~~i~~--~~~~lyv~~~~--~~~~v~viD~~t~~---~-----~~~i~~g~~p 174 (328)
T 3dsm_A 112 PKTYEIT--GYIECPDMDMESGST---EQMVQ--YGKYVYVNCWS--YQNRILKIDTETDK---V-----VDELTIGIQP 174 (328)
T ss_dssp TTTTEEE--EEEECTTCCTTTCBC---CCEEE--ETTEEEEEECT--TCCEEEEEETTTTE---E-----EEEEECSSCB
T ss_pred CCCCeEE--EEEEcCCccccCCCc---ceEEE--ECCEEEEEcCC--CCCEEEEEECCCCe---E-----EEEEEcCCCc
Confidence 7654211 1122111 22 23444 56777655321 13689999998741 1 1111111111
Q ss_pred eeEEEEeeCCEEEEEECCCCC-------CceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeE
Q psy2521 373 HHEIIANNGPELIVKTTKNAP-------KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSV 444 (783)
Q Consensus 373 ~~~~~s~dg~~l~~~t~~~~~-------~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~ 444 (783)
..-.++++|+ +|+.++.+.. ...|+++|.++.. ....+.-........+.+. +++.||+... .
T Consensus 175 ~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-----~ 245 (328)
T 3dsm_A 175 TSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFKLGDWPSEVQLNGTRDTLYWINN-----D 245 (328)
T ss_dssp CCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECCTTCCCEEEEECTTSCEEEEESS-----S
T ss_pred cceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecCCCCCceeEEEecCCCEEEEEcc-----E
Confidence 1124778765 7776654311 2579999987654 3322222111122344444 4466666432 7
Q ss_pred EEEEECCCCceeee--ecCCCeEEEeeeccccccEEEEEE-ecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHS--FPLDLGQITHISGRRKYNEVFYGF-TSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~--l~~~~g~v~~~s~~~d~~~l~~~~-ss~~~P~~vy~~d~ 496 (783)
|+++|+.+++.... ++.......++..+|++..+|++- .++....+|+++|.
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 99999977764221 221113345677788777788764 34456778999998
|
| >2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=2.5e-06 Score=86.51 Aligned_cols=91 Identities=10% Similarity=-0.002 Sum_probs=62.5
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..|.|+++||..+.... |.. +...|. .++.|+.+|++|. + ...+|+.+.++.+. .
T Consensus 21 ~~~~l~~~hg~~~~~~~--~~~-~~~~l~-~~~~v~~~d~~g~---~-------------~~~~~~~~~i~~~~-----~ 75 (244)
T 2cb9_A 21 GGKNLFCFPPISGFGIY--FKD-LALQLN-HKAAVYGFHFIEE---D-------------SRIEQYVSRITEIQ-----P 75 (244)
T ss_dssp CSSEEEEECCTTCCGGG--GHH-HHHHTT-TTSEEEEECCCCS---T-------------THHHHHHHHHHHHC-----S
T ss_pred CCCCEEEECCCCCCHHH--HHH-HHHHhC-CCceEEEEcCCCH---H-------------HHHHHHHHHHHHhC-----C
Confidence 45789999998765432 433 345565 4899999999983 1 12456665555441 1
Q ss_pred CCcEEEEEeChhHHHHHHHHhcC---CCceeEEEEcCCc
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQR---PELYGAALILVGA 669 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~---p~lf~a~i~~~~~ 669 (783)
..++.++|+|+||.++..++.+. ++....+|...+.
T Consensus 76 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~ 114 (244)
T 2cb9_A 76 EGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAY 114 (244)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCC
Confidence 25799999999999999888764 5667777766554
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.20 E-value=3.9e-05 Score=91.25 Aligned_cols=243 Identities=12% Similarity=0.027 Sum_probs=134.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc--cccc-cccccccCeeEEeeC--CCEEEEEEeecCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK--DYPE-VLKNVKFPSISWTHD--HKGFFYNQYCDINGTADG 283 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~--~~~~-~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~g 283 (783)
-.+..++|||||++|+.+.. + ..|+|||+.++. .+.. .........++|+|+ ++.|+....+
T Consensus 10 ~~V~~l~~s~dg~~latg~~-d----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSS-D----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEET-T----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT--------
T ss_pred ceeEEEEECCCCCeEEEEEC-C----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC--------
Confidence 34788999999999887643 2 469999987443 2211 111222357899998 7777766522
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD--Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
..|+++++.+........+. ........+.|+|+ |+.++.... ...|.++|+.++.. .
T Consensus 77 --------g~I~vwd~~~~~~~~~~~~~--~h~~~V~~v~~sp~~~~~~l~sgs~----dg~I~vwdl~~~~~------~ 136 (753)
T 3jro_A 77 --------GKVLIWKEENGRWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASS----DGKVSVVEFKENGT------T 136 (753)
T ss_dssp --------SCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEECCSSSC------C
T ss_pred --------CeEEEEECCCCccccccccc--CCCCCeEEEEECCCCCCCEEEEEeC----CCcEEEEEeecCCC------c
Confidence 25777777654211222222 22234568899999 888876543 25899999987311 1
Q ss_pred CceeeecCccceeE--EEEe-------------eCCEEEEEECCCCCCceEEEEcCCCCCCC-CcEEeecCCCCceEEEE
Q psy2521 362 PLKTVIPGMDHHHE--IIAN-------------NGPELIVKTTKNAPKGKVVTINLNNPCEK-NWKTLIPEDENRTLDVV 425 (783)
Q Consensus 362 ~~~~l~~~~~~~~~--~~s~-------------dg~~l~~~t~~~~~~~~L~~~d~~~~~~~-~~~~li~~~~~~~l~~~ 425 (783)
.... ..+...... .|+| +++.|+..+.. +.|..+|+.++... .....+... ...+..+
T Consensus 137 ~~~~-~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d----g~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l 210 (753)
T 3jro_A 137 SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEGH-SDWVRDV 210 (753)
T ss_dssp CCEE-EECCSSCEEEEEECCCC---------CGGGCCEEEEETT----SCEEEEEEETTTTEEEEEEEECCC-SSCEEEE
T ss_pred ceeE-eecCCCceEEEEecCcccccccccccCCCCCEEEEEECC----CeEEEEeccCCcccceeeeeecCC-CCcEEEE
Confidence 1111 222222222 4777 56766654442 34777777654310 011122222 2334444
Q ss_pred EEeeC---CEEEEEEecCCeeEEEEEECCCCcee---eeecC--CCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 426 AAVAN---NKLIVHYIQNVRSVMDLHDLNTGKRL---HSFPL--DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 426 ~~~~g---~~l~~~~~~~g~~~l~~~dl~~G~~~---~~l~~--~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+..+ +.++++...++ .|.+||+.+++.. ..... ..+.+..+.+++++..++.. +. -+.++.+|+
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~---Dg~I~vwd~ 283 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GG---DNKVTLWKE 283 (753)
T ss_dssp EECCCCSSSEEEEEEESSS--CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CS---SSCEECCBC
T ss_pred EeccCCCCCCEEEEEecCC--EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cC---CCEEEEEec
Confidence 44443 56777777665 5788888665311 11111 23455566777887655532 22 346888887
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=0.00055 Score=69.81 Aligned_cols=207 Identities=10% Similarity=0.043 Sum_probs=125.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..+++|+|++++|.++-.. . ..|+++|++++........+ ....++++.|+++.||++..
T Consensus 38 ~~gi~~d~~~~~ly~~d~~-~---~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~--------------- 98 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDIS-E---PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--------------- 98 (267)
T ss_dssp EEEEEEETTTTEEEEEETT-T---TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET---------------
T ss_pred EEEEEEecCCCEEEEEECC-C---CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC---------------
Confidence 5679999998887665432 2 36999999877543221111 23357889998888887762
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-c
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-P 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~-~ 368 (783)
...+|++.++.... ...+..... ..-.++.++|++++|++.... .....|+.+++++. . ...+. .
T Consensus 99 ~~~~I~~~~~~g~~--~~~~~~~~~--~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~-~--------~~~~~~~ 164 (267)
T 1npe_A 99 QLDRIEVAKMDGTQ--RRVLFDTGL--VNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGT-N--------RRILAQD 164 (267)
T ss_dssp TTTEEEEEETTSCS--CEEEECSSC--SSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSC-C--------CEEEECT
T ss_pred CCCEEEEEEcCCCC--EEEEEECCC--CCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCC-C--------cEEEEEC
Confidence 13468888776432 222332211 122578899998888776432 12468999988762 1 11122 1
Q ss_pred CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
+...-.. .+++++++||+.... ..+|+++++++.. .+.++... ... .++... ++.|++....+ .+|++
T Consensus 165 ~~~~P~gia~d~~~~~lyv~d~~---~~~I~~~~~~g~~---~~~~~~~~-~~P-~gi~~d-~~~lyva~~~~--~~v~~ 233 (267)
T 1npe_A 165 NLGLPNGLTFDAFSSQLCWVDAG---THRAECLNPAQPG---RRKVLEGL-QYP-FAVTSY-GKNLYYTDWKT--NSVIA 233 (267)
T ss_dssp TCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTEEE---EEEEEECC-CSE-EEEEEE-TTEEEEEETTT--TEEEE
T ss_pred CCCCCcEEEEcCCCCEEEEEECC---CCEEEEEecCCCc---eEEEecCC-CCc-eEEEEe-CCEEEEEECCC--CeEEE
Confidence 1111112 488888999886543 4579999987643 23344322 222 344444 58888865544 47999
Q ss_pred EECCCCceeeeecC
Q psy2521 448 HDLNTGKRLHSFPL 461 (783)
Q Consensus 448 ~dl~~G~~~~~l~~ 461 (783)
+|+.+|+.+..|..
T Consensus 234 ~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 234 MDLAISKEMDTFHP 247 (267)
T ss_dssp EETTTTEEEEEECC
T ss_pred EeCCCCCceEEEcc
Confidence 99987887777753
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.19 E-value=0.00019 Score=77.04 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=111.6
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-c-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-V-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..+++||||++|..+.. .. ...|.++|+++++.+.. . .... .++...|+++..+++...+
T Consensus 111 ~~i~~spdg~~l~v~n~-~~--~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~~~~d------------- 172 (361)
T 2oiz_A 111 GLFRQTTDGKFIVLQNA-SP--ATSIGIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMTICGD------------- 172 (361)
T ss_dssp GGEEECTTSSEEEEEEE-SS--SEEEEEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEEEETT-------------
T ss_pred ceEEECCCCCEEEEECC-CC--CCeEEEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEEECCC-------------
Confidence 45899999998766543 21 25799999999976543 2 1111 1233445543333332111
Q ss_pred CCceEEEEEcCCCCCCce------eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 290 MGQKIYYHVLGTEQDKDI------PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~------~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
.++..+.+.... +.. .++.....+ .....++||+.+++... ...++++|+.++. ..+. ..+
T Consensus 173 --g~~~~v~~~~~g-~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~----~~~v~v~d~~~~~-~~~~--~~~ 239 (361)
T 2oiz_A 173 --GGLLTINLGEDG-KVASQSRSKQMFSVKDDP---IFIAPALDKDKAHFVSY----YGNVYSADFSGDE-VKVD--GPW 239 (361)
T ss_dssp --SSEEEEEECTTS-SEEEEEECCCCSCTTTSC---BCSCCEECSSEEEEEBT----TSEEEEEECSSSS-CEEE--EEE
T ss_pred --CcEEEEEECCCC-cEeeeccccceEcCCCCc---eEEEecccCCEEEEEeC----CCeEEEEEecCCC-ceec--ccc
Confidence 012222221110 000 011111112 12334788888876542 2479999987521 0000 000
Q ss_pred eeeec------Cc-cce--eEEEEeeCCEEEEEECCCC-------CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE
Q psy2521 364 KTVIP------GM-DHH--HEIIANNGPELIVKTTKNA-------PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA 427 (783)
Q Consensus 364 ~~l~~------~~-~~~--~~~~s~dg~~l~~~t~~~~-------~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~ 427 (783)
.+.. +. ..+ .-.+++|++++|+....++ ....|+.+|+++.+ ...-++-. . ...-...
T Consensus 240 -~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~-~-p~~ia~s 313 (361)
T 2oiz_A 240 -SLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGR-D-ALSMTID 313 (361)
T ss_dssp -ESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECT-T-CCEEEEE
T ss_pred -cccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecC-C-eeEEEEC
Confidence 0000 00 011 1258899999997653111 23479999998764 23333433 2 3333344
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCC--ceeeeec-CCCeEEEeeecccccc
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTG--KRLHSFP-LDLGQITHISGRRKYN 476 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G--~~~~~l~-~~~g~v~~~s~~~d~~ 476 (783)
.+|+.|++. .. ..|.+||+++| +.+..|. ...+ -..+..+|++.
T Consensus 314 pdg~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~-P~~~~~~p~G~ 360 (361)
T 2oiz_A 314 QQRNLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEA-SLQVQFHPVGG 360 (361)
T ss_dssp TTTTEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSS-EEEEEECCCSC
T ss_pred CCCCEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCC-cEEEEecCCCC
Confidence 555555543 32 67999999999 8777763 3222 22455566653
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=98.18 E-value=0.00046 Score=73.25 Aligned_cols=231 Identities=11% Similarity=0.026 Sum_probs=125.4
Q ss_pred EeeEEE-----CC-CCcEEEEEEecCCCceEEEEEEECCCCcccc------cccc--ccccCeeEEeeCCCEEEEEEeec
Q psy2521 211 LKLYAF-----SD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP------EVLK--NVKFPSISWTHDHKGFFYNQYCD 276 (783)
Q Consensus 211 l~~~~~-----SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~------~~~~--~~~~~~~~WspDg~~l~y~~~~~ 276 (783)
+..+.| +| ||++|+-+.. ..+|++||+.+++... .++. ......++|+||++.|+-...
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~-----D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~-- 96 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSR-----DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW-- 96 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEET-----TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET--
T ss_pred hhheeeEEEeecCCCCCEEEEEcC-----CCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC--
Confidence 566777 77 9998875443 2469999987654210 1111 112357899999987764442
Q ss_pred CCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc
Q psy2521 277 INGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 356 (783)
Q Consensus 277 ~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~ 356 (783)
...|.++++.+.. ....+... ......+.|+|||++|+.... ...|.++|+.+. .
T Consensus 97 --------------D~~v~lwd~~~~~--~~~~~~~h--~~~v~~v~~sp~~~~l~s~~~----d~~i~~wd~~~~-~-- 151 (343)
T 2xzm_R 97 --------------DKTLRLWDLRTGT--TYKRFVGH--QSEVYSVAFSPDNRQILSAGA----EREIKLWNILGE-C-- 151 (343)
T ss_dssp --------------TSEEEEEETTSSC--EEEEEECC--CSCEEEEEECSSTTEEEEEET----TSCEEEEESSSC-E--
T ss_pred --------------CCcEEEEECCCCc--EEEEEcCC--CCcEEEEEECCCCCEEEEEcC----CCEEEEEeccCC-c--
Confidence 2368888887653 22233322 223567899999999875432 257888888651 0
Q ss_pred ccCCCCceeee--cCcccee-E-EEEeeC----------CEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceE
Q psy2521 357 ISGKFPLKTVI--PGMDHHH-E-IIANNG----------PELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTL 422 (783)
Q Consensus 357 l~~~~~~~~l~--~~~~~~~-~-~~s~dg----------~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l 422 (783)
..... ....... . .|+|++ ..|+..+ . .+.|..+|..... ...+..+. .. +
T Consensus 152 ------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-~---d~~i~iwd~~~~~---~~~~~~h~-~~-v 216 (343)
T 2xzm_R 152 ------KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-W---DGRLKVWNTNFQI---RYTFKAHE-SN-V 216 (343)
T ss_dssp ------EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-T---TSEEEEEETTTEE---EEEEECCS-SC-E
T ss_pred ------eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc-C---CCEEEEEcCCCce---eEEEcCcc-cc-c
Confidence 00000 0111111 1 366765 3444332 2 2457777743211 12232232 33 3
Q ss_pred EEEEEeeCCEEEEEEecCCeeEEEEEECCC-CceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 423 DVVAAVANNKLIVHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 423 ~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~-G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+.+..++.++++...++ .|.+||+.+ +.....+.. ...+..+.++|++..+... + -..+..+|+
T Consensus 217 ~~~~~s~~g~~l~sgs~dg--~v~iwd~~~~~~~~~~~~~-~~~v~~v~~sp~~~~la~~--~---d~~v~iw~~ 283 (343)
T 2xzm_R 217 NHLSISPNGKYIATGGKDK--KLLIWDILNLTYPQREFDA-GSTINQIAFNPKLQWVAVG--T---DQGVKIFNL 283 (343)
T ss_dssp EEEEECTTSSEEEEEETTC--EEEEEESSCCSSCSEEEEC-SSCEEEEEECSSSCEEEEE--E---SSCEEEEES
T ss_pred eEEEECCCCCEEEEEcCCC--eEEEEECCCCcccceeecC-CCcEEEEEECCCCCEEEEE--C---CCCEEEEEe
Confidence 4444443355666666664 688899833 333233322 2346677778887654432 2 235888888
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=98.18 E-value=0.001 Score=73.57 Aligned_cols=221 Identities=13% Similarity=0.115 Sum_probs=123.1
Q ss_pred EeeEEEC--CCCcEEEEEEecCCCceEEEEEEECCCCccccc----------------------cccccccCeeEEeeCC
Q psy2521 211 LKLYAFS--DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----------------------VLKNVKFPSISWTHDH 266 (783)
Q Consensus 211 l~~~~~S--PDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~----------------------~~~~~~~~~~~WspDg 266 (783)
+..+.++ ||+++|+.+.. + ..|+++|+.++..... ...+....-..+++++
T Consensus 206 v~~l~~~~~~~~~~l~s~s~-d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 280 (464)
T 3v7d_B 206 VRCLDIVEYKNIKYIVTGSR-D----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 280 (464)
T ss_dssp EEEEEEEESSSCEEEEEEET-T----SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEET
T ss_pred cEEEEEecCCCCCEEEEEcC-C----CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCC
Confidence 4445555 78888776543 2 4599999988764321 1111111234567888
Q ss_pred CEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEE
Q psy2521 267 KGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHY 346 (783)
Q Consensus 267 ~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~ 346 (783)
+.|+.... ...|.++++.+.. ....+.. .......+.|+|||++|+....+ ..|.+
T Consensus 281 ~~l~~~~~----------------d~~i~vwd~~~~~--~~~~~~~--~~~~v~~~~~~~~~~~l~sg~~d----g~i~v 336 (464)
T 3v7d_B 281 NIVVSGSY----------------DNTLIVWDVAQMK--CLYILSG--HTDRIYSTIYDHERKRCISASMD----TTIRI 336 (464)
T ss_dssp TEEEEEET----------------TSCEEEEETTTTE--EEEEECC--CSSCEEEEEEETTTTEEEEEETT----SCEEE
T ss_pred CEEEEEeC----------------CCeEEEEECCCCc--EEEEecC--CCCCEEEEEEcCCCCEEEEEeCC----CcEEE
Confidence 87776652 2358888886542 2222322 22345688999999998754332 57999
Q ss_pred EECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEE
Q psy2521 347 FDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 426 (783)
Q Consensus 347 ~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~ 426 (783)
+|+.++. ....+.+.......+..+++.|+..+. .+.|..+|+.++. ........ ........
T Consensus 337 wd~~~~~---------~~~~~~~h~~~v~~~~~~~~~l~s~s~----dg~v~vwd~~~~~---~~~~~~~~-~~~~~~~~ 399 (464)
T 3v7d_B 337 WDLENGE---------LMYTLQGHTALVGLLRLSDKFLVSAAA----DGSIRGWDANDYS---RKFSYHHT-NLSAITTF 399 (464)
T ss_dssp EETTTTE---------EEEEECCCSSCEEEEEECSSEEEEEET----TSEEEEEETTTCC---EEEEEECT-TCCCEEEE
T ss_pred EECCCCc---------EEEEEeCCCCcEEEEEEcCCEEEEEeC----CCcEEEEECCCCc---eeeeecCC-CCccEEEE
Confidence 9998741 111222223333334445666655443 3468888987654 12222222 22222223
Q ss_pred EeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEe
Q psy2521 427 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 427 ~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~s 483 (783)
..+ +.+++... + ..|.+||+.+|+.++.+..+ .+.+..+.++ ++.+++..+
T Consensus 400 ~~~-~~~l~~~~-d--g~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 400 YVS-DNILVSGS-E--NQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVE 451 (464)
T ss_dssp EEC-SSEEEEEE-T--TEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEE
T ss_pred EeC-CCEEEEec-C--CeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEE
Confidence 344 45555554 4 37999999899887654443 5566666554 455555444
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00025 Score=77.96 Aligned_cols=207 Identities=12% Similarity=0.088 Sum_probs=116.1
Q ss_pred cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCC--------CCCceeEEecCCCCeeEEEEEEecCC
Q psy2521 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE--------QDKDIPVVEFPNGRSLGLHSEVTDCG 328 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~--------~~~d~~v~~~~~~~~~~~~~~~SpDG 328 (783)
...++|+|++..++++... ...|+++++.+. .......+.... .....+.|+|++
T Consensus 131 v~~l~~~p~~~~~lat~~~---------------dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~~~~ 193 (430)
T 2xyi_A 131 VNRARYMPQNACVIATKTP---------------SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQ--KEGYGLSWNPNL 193 (430)
T ss_dssp CSEEEEETTEEEEEEEECS---------------SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCS--SCCCCEEECTTS
T ss_pred EEEEEECCCCCcEEEEECC---------------CCcEEEEECCCcccccCccccCCCcEEecCCC--CCeEEEEeCCCC
Confidence 4689999986667666622 225777887642 112222232222 123578999999
Q ss_pred c-EEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCC
Q psy2521 329 R-YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNP 405 (783)
Q Consensus 329 k-~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~ 405 (783)
+ +|+ +.. ....|.++++.++.... ................. .|+|+++.+++.... .+.|..+|+...
T Consensus 194 ~~~l~-s~~---~dg~i~vwd~~~~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~i~i~d~~~~ 264 (430)
T 2xyi_A 194 NGYLL-SAS---DDHTICLWDINATPKEH--RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD---DQKLMIWDTRNN 264 (430)
T ss_dssp TTEEE-EEC---TTSCEEEEETTSCCBGG--GEEECSEEECCCSSCEEEEEECSSCTTEEEEEET---TSEEEEEETTCS
T ss_pred CCeEE-EEe---CCCeEEEEeCCCCCCCC--ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC---CCeEEEEECCCC
Confidence 9 554 332 23579999997731100 00000111222222222 488855555554433 356888998765
Q ss_pred CC-CCcEEeecCCCCceEEEEEE-eeCCEEEEEEecCCeeEEEEEECCC-CceeeeecCCCeEEEeeeccccccEEEEEE
Q psy2521 406 CE-KNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 406 ~~-~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~~~g~~~l~~~dl~~-G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ 482 (783)
.. .....+..+. .. +..+.+ .++..++++...++ .|.+||+.+ ++.+..+....+.+..+.++++++.++++.
T Consensus 265 ~~~~~~~~~~~~~-~~-v~~i~~~p~~~~~l~tg~~dg--~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 265 NTSKPSHTVDAHT-AE-VNCLSFNPYSEFILATGSADK--TVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp CSSSCSEEEECCS-SC-EEEEEECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CCCcceeEeecCC-CC-eEEEEeCCCCCCEEEEEeCCC--eEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEE
Confidence 21 1233333333 23 334433 44455777777775 589999966 344455555556677888889887766665
Q ss_pred ecCCCCceEEEEeC
Q psy2521 483 TSFLQPGTIYHCNI 496 (783)
Q Consensus 483 ss~~~P~~vy~~d~ 496 (783)
+.- ..+..+|+
T Consensus 341 ~~d---~~i~iwd~ 351 (430)
T 2xyi_A 341 GTD---RRLHVWDL 351 (430)
T ss_dssp ETT---SCCEEEEG
T ss_pred eCC---CcEEEEeC
Confidence 543 46888888
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00058 Score=72.04 Aligned_cols=241 Identities=8% Similarity=0.010 Sum_probs=118.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-cccc----cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVL----KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
+..+.+||| +||-+. .+ ..|++||+.++... ..++ .......++|+||++.|+-...+
T Consensus 17 v~~~~~s~~--~las~~-~D----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---------- 79 (330)
T 2hes_X 17 IWSFDFSQG--ILATGS-TD----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---------- 79 (330)
T ss_dssp EEEEEEETT--EEEEEE-SS----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT----------
T ss_pred eeeeccCCC--EEEEEc-CC----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC----------
Confidence 667888988 555433 22 46999999886421 1111 11223578999999877765522
Q ss_pred ccccCCceEEEEEcCCCCC---CceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 286 TTAHMGQKIYYHVLGTEQD---KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~---~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
..|.++++..... ....+.....+......+.|+|||++|+-... ...|.++|+.... . ...
T Consensus 80 ------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~----D~~v~iwd~~~~~-~----~~~ 144 (330)
T 2hes_X 80 ------STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR----DKSVWIWETDESG-E----EYE 144 (330)
T ss_dssp ------SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEET----TSCEEEEECCTTC-C----CCE
T ss_pred ------CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEeccCCC-C----CeE
Confidence 2466666643211 11122111122233567899999999875432 2578899985310 0 001
Q ss_pred ceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeC--CEEEEEEe
Q psy2521 363 LKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVAN--NKLIVHYI 438 (783)
Q Consensus 363 ~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g--~~l~~~~~ 438 (783)
....+.+...... .|+|+++.|+-.+.. ..|..+++..+.......+..+. .. +..+.+..+ ..++++..
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D----~~i~iW~~~~~~~~~~~~~~~h~-~~-v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYD----DTVRIWKDYDDDWECVAVLNGHE-GT-VWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETT----SCEEEEEEETTEEEEEEEECCCS-SC-EEEEEECCSSSSCEEEEEE
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCC----CeEEEEECCCCCeeEEEEccCCC-Cc-EEEEEecCCCCeeEEEEEe
Confidence 1112223232222 589998876654432 23555565433201112222222 23 333433332 34566666
Q ss_pred cCCeeEEEEEECCCC--------ceeeeecC-CCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTG--------KRLHSFPL-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G--------~~~~~l~~-~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|+ .|.+|++.++ .....+.. ..+.|..+.+++++ ++++.+. -..+..+|.
T Consensus 219 ~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~---dg~v~iw~~ 278 (330)
T 2hes_X 219 DDS--TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGA---DGVLAVYEE 278 (330)
T ss_dssp TTS--CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEET---TSCEEEEEE
T ss_pred CCC--eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeC---CCEEEEEEc
Confidence 665 4666776332 11122222 23445555555443 3333322 245677776
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.15 E-value=0.00029 Score=85.34 Aligned_cols=208 Identities=11% Similarity=0.027 Sum_probs=117.1
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+..++|||||++||.+... .+|++||..+++.+...........++|+| |+.|+-.. .
T Consensus 20 V~~lafspdg~~lAsgs~D-----g~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s----------------~ 77 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVT-----GEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN----------------A 77 (902)
T ss_dssp EEEEEEETTTTEEEEEETT-----SEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE----------------T
T ss_pred cEEEEECCCCCEEEEEeCC-----CEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE----------------C
Confidence 6789999999999976542 479999998876543222222346899999 77554443 1
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce--eeec
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK--TVIP 368 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~--~l~~ 368 (783)
...|.+|++.+.. ....+..+ .....+.|+|||++|+....+ ..|.++|+.++.........-+. ....
T Consensus 78 D~~v~lWd~~~~~--~~~~~~~~---~~V~~v~~sp~g~~l~sgs~d----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 78 KDTVYVLSLYSQK--VLTTVFVP---GKITSIDTDASLDWMLIGLQN----GSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp TCEEEEEETTTCS--EEEEEECS---SCEEEEECCTTCSEEEEEETT----SCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred cCeEEEEECCCCc--EEEEEcCC---CCEEEEEECCCCCEEEEEcCC----CcEEEEECCCCccccceeccccccccccc
Confidence 2468888987653 22233322 234678999999999865432 57899999873100000000000 0001
Q ss_pred Cccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC----------------CCCceEEEEEEeeC
Q psy2521 369 GMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE----------------DENRTLDVVAAVAN 430 (783)
Q Consensus 369 ~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~----------------~~~~~l~~~~~~~g 430 (783)
+.... .. .|+|++..+++.... ++.+ .+|+.++.. ...+..+ .....+..+.+..+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~---dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd 222 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYE---YVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN 222 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECS---SCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT
T ss_pred cCCCCeEEEEEccCCCCEEEEEeC---CCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCC
Confidence 11111 12 488865444444433 3457 889876531 1222211 00122334444433
Q ss_pred CEEEEEEecCCeeEEEEEECCCCceee
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKRLH 457 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~~~ 457 (783)
+.++++...|+ .|.+||+.+|+.+.
T Consensus 223 g~~lasgs~Dg--~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 223 SLHIITIHEDN--SLVFWDANSGHMIM 247 (902)
T ss_dssp SSEEEEEETTC--CEEEEETTTCCEEE
T ss_pred CCEEEEEECCC--eEEEEECCCCcEEE
Confidence 56666666665 68999998887643
|
| >1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22 | Back alignment and structure |
|---|
Probab=98.14 E-value=1.4e-06 Score=87.07 Aligned_cols=89 Identities=10% Similarity=0.033 Sum_probs=60.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|.|+++||..+.... |.. +...|. . +.|+.+|++|.+. ..+|+.+.++.+.. .
T Consensus 17 ~~~l~~~hg~~~~~~~--~~~-~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~-----~ 70 (230)
T 1jmk_C 17 EQIIFAFPPVLGYGLM--YQN-LSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQP-----E 70 (230)
T ss_dssp SEEEEEECCTTCCGGG--GHH-HHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHCC-----S
T ss_pred CCCEEEECCCCCchHH--HHH-HHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhCC-----C
Confidence 5789999998765432 332 334454 4 9999999998331 23466666655421 2
Q ss_pred CcEEEEEeChhHHHHHHHHhcC---CCceeEEEEcCCc
Q psy2521 635 KYITIMGGSNGGLLVGACLNQR---PELYGAALILVGA 669 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~---p~lf~a~i~~~~~ 669 (783)
.++.++|||+||.++..++.+. ++..+.++...+.
T Consensus 71 ~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 71 GPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 4799999999999999888764 3566777665543
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.9e-05 Score=83.40 Aligned_cols=208 Identities=11% Similarity=0.047 Sum_probs=106.4
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc---cc-cccccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK---DY-PEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~---~~-~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
..+..++|||||++|+.+... ..|++||+.+++ .. ...........++|+||++.|+....+
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------- 121 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA--------- 121 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETT-----SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS---------
T ss_pred ceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC---------
Confidence 347889999999998876532 359999999887 11 111122233578999999988877632
Q ss_pred cccccCCceEEEEEcCCCCCC-ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc-----
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDK-DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS----- 358 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~-d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~----- 358 (783)
..|.++++.+.... -...+..+. ......+.|+|||++|+....+ ..|.++|+..+......
T Consensus 122 -------~~i~iwd~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~ 189 (377)
T 3dwl_C 122 -------RVISVCYFEQENDWWVSKHLKRPL-RSTILSLDWHPNNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVW 189 (377)
T ss_dssp -------SCEEECCC-----CCCCEEECSSC-CSCEEEEEECTTSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSS
T ss_pred -------CeEEEEEECCcccceeeeEeeccc-CCCeEEEEEcCCCCEEEEEeCC----CEEEEEEEEecccCCCcccccc
Confidence 24777777655321 112233212 2345688999999998865433 46888887532100000
Q ss_pred -CCCCceeeec--Ccccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCC--cEEeecCCCCceEEEEEEeeCC
Q psy2521 359 -GKFPLKTVIP--GMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN--WKTLIPEDENRTLDVVAAVANN 431 (783)
Q Consensus 359 -~~~~~~~l~~--~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~--~~~li~~~~~~~l~~~~~~~g~ 431 (783)
...+...+.. +..... . .|+|+|+.|+..+.. +.|..+|+.++.... ...+..+. ..+..+.+..++
T Consensus 190 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~ 263 (377)
T 3dwl_C 190 GSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHD----SSVTIAYPSAPEQPPRALITVKLSQ--LPLRSLLWANES 263 (377)
T ss_dssp CSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETT----TEEC-CEECSTTSCEEECCCEECSS--SCEEEEEEEETT
T ss_pred ccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCC----CcEEEEECCCCCCcceeeEeecCCC--CceEEEEEcCCC
Confidence 0001111111 112222 2 589999877765543 457777776654200 12222222 233344444446
Q ss_pred EEEEEEecCCeeEEEEEECC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~ 451 (783)
.+++....++ +.+|+..
T Consensus 264 ~~l~~~~~~~---~~~~~~~ 280 (377)
T 3dwl_C 264 AIVAAGYNYS---PILLQGN 280 (377)
T ss_dssp EEEEEESSSS---EEEECCC
T ss_pred CEEEEEcCCc---EEEEEeC
Confidence 7666665443 4466653
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00069 Score=70.97 Aligned_cols=237 Identities=11% Similarity=0.061 Sum_probs=133.1
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..+.|||||++|+-.... ..|++++...+........ ........|+++++.|+....+
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------------ 149 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD------------ 149 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT------------
T ss_pred CCEEEEEECCCCCEEEEEccc-----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC------------
Confidence 347889999999998865432 4689999888765432221 1122466788999887755522
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
..+.++++.... .................+++++...++.... ....|.++|+.++. .....
T Consensus 150 ----~~~~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~---------~~~~~ 211 (340)
T 4aow_A 150 ----KTIKLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCK---------LKTNH 211 (340)
T ss_dssp ----SCEEEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTE---------EEEEE
T ss_pred ----CeEEEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEEEEEc--CCCEEEEEECCCCc---------eeeEe
Confidence 235555554321 1222222222234567788887654333322 22578899988731 11122
Q ss_pred cCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 PGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
.+...... .|+|+|+.|+..+. .+.|..+|+.+.. ....+... ..+..+.+..++.++.... + ..|
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~~---~~~~~~~~--~~v~~~~~~~~~~~~~~~~-d--~~i 279 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEGK---HLYTLDGG--DIINALCFSPNRYWLCAAT-G--PSI 279 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTE---EEEEEECS--SCEEEEEECSSSSEEEEEE-T--TEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccCc---eeeeecCC--ceEEeeecCCCCceeeccC-C--CEE
Confidence 22222222 48899887765443 3468888887644 12222222 2344444444456555443 3 368
Q ss_pred EEEECCCCceeeeecC---------CCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPL---------DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~---------~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+.++..+..+.. ..+.|..+.+++++..++ +.+. -..|..||+
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~---Dg~v~iW~~ 335 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF-AGYT---DNLVRVWQV 335 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE-EEET---TSCEEEEEE
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE-EEeC---CCEEEEEeC
Confidence 8999976655444432 134567778888887654 3322 246888888
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=98.12 E-value=0.0023 Score=65.03 Aligned_cols=227 Identities=8% Similarity=0.053 Sum_probs=128.0
Q ss_pred CcEEEEEEecCCCceEEEEEEECCCCccccc------cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 220 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE------VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 220 G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~------~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
|.+|.|+.. ..|+.+|++++..... ........+++|+|+++.||++.. ....
T Consensus 1 ~~~l~~~~~------~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~---------------~~~~ 59 (267)
T 1npe_A 1 GTHLLFAQT------GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---------------SEPS 59 (267)
T ss_dssp CEEEEEEEE------EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET---------------TTTE
T ss_pred CcEEEEEcC------CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC---------------CCCE
Confidence 566777642 4699999987653211 111122358999999989988762 2347
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-Cccc
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDH 372 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~ 372 (783)
|++.++.+... ..+..... ..-.++.++++++.|++... ....|+++++++. . ...+.. +...
T Consensus 60 I~~~~~~g~~~--~~~~~~~~--~~p~~ia~d~~~~~lyv~d~---~~~~I~~~~~~g~-~--------~~~~~~~~~~~ 123 (267)
T 1npe_A 60 IGRASLHGGEP--TTIIRQDL--GSPEGIALDHLGRTIFWTDS---QLDRIEVAKMDGT-Q--------RRVLFDTGLVN 123 (267)
T ss_dssp EEEEESSSCCC--EEEECTTC--CCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC-S--------CEEEECSSCSS
T ss_pred EEEEecCCCCc--EEEEECCC--CCccEEEEEecCCeEEEEEC---CCCEEEEEEcCCC-C--------EEEEEECCCCC
Confidence 88888765432 22332211 12357889999988877643 2368999998762 1 112222 1111
Q ss_pred eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEEC
Q psy2521 373 HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 373 ~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl 450 (783)
-.. .+++++++||+... ...+.+|+++++++.. .+.+.... -....++.+. +++.||+..... .+|+++++
T Consensus 124 P~~i~vd~~~g~lyv~~~-~~~~~~I~~~~~dg~~---~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~--~~I~~~~~ 196 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDW-NRDNPKIETSHMDGTN---RRILAQDN-LGLPNGLTFDAFSSQLCWVDAGT--HRAECLNP 196 (267)
T ss_dssp EEEEEEETTTTEEEEEEC-CSSSCEEEEEETTSCC---CEEEECTT-CSCEEEEEEETTTTEEEEEETTT--TEEEEEET
T ss_pred ccEEEEeeCCCEEEEEEC-CCCCcEEEEEecCCCC---cEEEEECC-CCCCcEEEEcCCCCEEEEEECCC--CEEEEEec
Confidence 112 48888888887543 2234679999987643 23343332 2223444544 346888776544 57999999
Q ss_pred CCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 451 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 451 ~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|.....+........++. .+++.+|++-.. ..+++++|.
T Consensus 197 -~g~~~~~~~~~~~~P~gi~--~d~~~lyva~~~---~~~v~~~d~ 236 (267)
T 1npe_A 197 -AQPGRRKVLEGLQYPFAVT--SYGKNLYYTDWK---TNSVIAMDL 236 (267)
T ss_dssp -TEEEEEEEEECCCSEEEEE--EETTEEEEEETT---TTEEEEEET
T ss_pred -CCCceEEEecCCCCceEEE--EeCCEEEEEECC---CCeEEEEeC
Confidence 4543333211111112332 345667664322 247889988
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.11 E-value=0.00077 Score=72.54 Aligned_cols=201 Identities=12% Similarity=0.132 Sum_probs=113.9
Q ss_pred EEeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccc--------------cccccCeeEEee-CCCEEEEEE
Q psy2521 210 ALKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------KNVKFPSISWTH-DHKGFFYNQ 273 (783)
Q Consensus 210 ~l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--------------~~~~~~~~~Wsp-Dg~~l~y~~ 273 (783)
.+..++||| ||++||.+... ..|++||+.+++...... .......+.|+| +++.|+...
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred cEEEEEEecCCCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 377899999 99999876542 359999999887543211 222346789999 444454433
Q ss_pred eecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC---CcEEEEEEecCCCCcEEEEEECC
Q psy2521 274 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC---GRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 274 ~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD---Gk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
. ...|.++++.+.. ....+.... ....+.++|+ +++++.... ...|+++|+.
T Consensus 120 -~---------------d~~i~iwd~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~d~~ 174 (408)
T 4a11_B 120 -F---------------DKTLKVWDTNTLQ--TADVFNFEE---TVYSHHMSPVSTKHCLVAVGTR----GPKVQLCDLK 174 (408)
T ss_dssp -T---------------TSEEEEEETTTTE--EEEEEECSS---CEEEEEECSSCSSCCEEEEEES----SSSEEEEESS
T ss_pred -C---------------CCeEEEeeCCCCc--cceeccCCC---ceeeeEeecCCCCCcEEEEEcC----CCeEEEEeCC
Confidence 1 2368888887643 223333222 2346677774 446665432 2579999998
Q ss_pred CCCCCcccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee--------------
Q psy2521 351 SLPDGKISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI-------------- 414 (783)
Q Consensus 351 ~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li-------------- 414 (783)
++. .... +....... . .|+|+++.+++....+ +.|..+|+..... ....+-
T Consensus 175 ~~~--------~~~~-~~~~~~~v~~~~~~~~~~~ll~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 175 SGS--------CSHI-LQGHRQEILAVSWSPRYDYILATASAD---SRVKLWDVRRASG-CLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp SSC--------CCEE-ECCCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTCSSC-CSEECCTTTTCSCCCTTTSS
T ss_pred Ccc--------eeee-ecCCCCcEEEEEECCCCCcEEEEEcCC---CcEEEEECCCCCc-ccccccccccccceeecccc
Confidence 731 1122 22222222 2 5899998765555432 3577788765431 111110
Q ss_pred cCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCcee
Q psy2521 415 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRL 456 (783)
Q Consensus 415 ~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~ 456 (783)
... ...+..+.+..++..++....++ .|.+||+.+++..
T Consensus 242 ~~~-~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~ 280 (408)
T 4a11_B 242 TAH-NGKVNGLCFTSDGLHLLTVGTDN--RMRLWNSSNGENT 280 (408)
T ss_dssp CSC-SSCEEEEEECTTSSEEEEEETTS--CEEEEETTTCCBC
T ss_pred ccc-cCceeEEEEcCCCCEEEEecCCC--eEEEEECCCCccc
Confidence 111 22334444443355555555554 5889999777653
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.10 E-value=0.00065 Score=70.58 Aligned_cols=248 Identities=13% Similarity=0.111 Sum_probs=131.9
Q ss_pred EeeEEECCCCcEEEEEEe---cCCCceEEEEEEECCCCccccccc-----cccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLS---KSGSDWNTLHIKDVDTGKDYPEVL-----KNVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~---~~G~d~~~i~v~Dl~tg~~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
..+++|++||+.++ +.. ..+.....|+++|..+|+...... ......++.+++|+..|+++..
T Consensus 20 ~~~~~~~~~g~l~~-~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------- 90 (314)
T 1pjx_A 20 AEGPVFDKNGDFYI-VAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------- 90 (314)
T ss_dssp CEEEEECTTSCEEE-EETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET--------
T ss_pred ccCceECCCCCEEE-EEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC--------
Confidence 35788999997443 310 001112469999998887643322 1112357889888445666551
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeE-EecCCC-C-eeEEEEEEecCCcEEEEEEecCC------------CCcEEEEE
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPV-VEFPNG-R-SLGLHSEVTDCGRYLLVSTSNNT------------QGSDLHYF 347 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v-~~~~~~-~-~~~~~~~~SpDGk~l~~~~~~~~------------~~~~l~~~ 347 (783)
...|++++.. .. -..+ ...... + .....+.+++||+..+ ...... ....|+.+
T Consensus 91 --------~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 91 --------RLGLLVVQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWI-TAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp --------TTEEEEEETT-SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEE-EECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred --------CCCEEEEeCC-CC--EEEEEeccCCCccccCCcCEEECCCCCEEE-EecCcccccccccccccCCCCeEEEE
Confidence 1257777665 21 1111 111110 0 1224678899997544 322110 02578888
Q ss_pred ECCCCCCCcccCCCCceeeecCccceeE-EEE----eeCCEEEEEECCCCCCceEEEEcCC-CCCCCCcEEe--ecCCCC
Q psy2521 348 DLHSLPDGKISGKFPLKTVIPGMDHHHE-IIA----NNGPELIVKTTKNAPKGKVVTINLN-NPCEKNWKTL--IPEDEN 419 (783)
Q Consensus 348 dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s----~dg~~l~~~t~~~~~~~~L~~~d~~-~~~~~~~~~l--i~~~~~ 419 (783)
+.++ . ...+......... .++ ++|+.||+.... ..+|++++++ .+.....+.+ ++....
T Consensus 159 ~~~g-~---------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 159 TTDG-Q---------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp CTTS-C---------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred CCCC-C---------EEEeccCCCCcceEEEecccCCCCCEEEEEECC---CCeEEEEECCCCCccccceEEEECCCCCC
Confidence 8763 1 1122221111112 488 888778875433 3568888875 2221001111 111110
Q ss_pred ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 420 RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 420 ~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
.....+....++.+++....+ ..|.++|+++|+.+..+..+...+.++..+++++.++++-.. ...++++++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~ 298 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQ 298 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECS
T ss_pred CCCCceEECCCCCEEEEEcCC--CEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCC
Confidence 233445555446777765443 368999996587666666664445566667888777765432 2579999983
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.09 E-value=0.0026 Score=68.89 Aligned_cols=206 Identities=7% Similarity=0.005 Sum_probs=125.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..++.|++++.+|.|+ +..+ ..|+.++++++........+ ....++++.+.+..||++..
T Consensus 118 ~~gl~~d~~~~~ly~~-D~~~---~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~--------------- 178 (386)
T 3v65_B 118 AIALDFHHRRELVFWS-DVTL---DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--------------- 178 (386)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEET---------------
T ss_pred cEEEEEecCCCeEEEE-eCCC---CcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcC---------------
Confidence 5678999988887665 4322 36999999887643322111 12357888888888888762
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP- 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~- 368 (783)
....|++.+++... ...+..... ..-.++++.|++.+|+++... ....|+.+++++. . ...++.
T Consensus 179 ~~~~I~~~~~dg~~--~~~l~~~~l--~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~-~--------~~~~~~~ 243 (386)
T 3v65_B 179 GTSRIEVANLDGAH--RKVLLWQSL--EKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGS-G--------RRIIADT 243 (386)
T ss_dssp TTTEEEECBTTSCS--CEEEECSSC--SCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSC-S--------CEEEECS
T ss_pred CCCeEEEEeCCCCc--eEEeecCCC--CCCcEEEEEcCCCeEEEeccC--CCCEEEEEeCCCC-C--------cEEEEEC
Confidence 12367777776432 222332211 122578899999998876533 2378999999872 1 122222
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
+...-. -.+++++++||+.-. ...+|.++++++.. .+.++...... -.++.+.+ +.||++.... .+|.+
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~~~~~~-P~giav~~-~~ly~td~~~--~~V~~ 313 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH---RKAVISQGLPH-PFAITVFE-DSLYWTDWHT--KSINS 313 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEET---TTTEEEEECTTSCS---CEEEECSSCSS-EEEEEEET-TEEEEEETTT--TEEEE
T ss_pred CCCCeeeEEEeCCCCEEEEEEC---CCCEEEEEeCCCCe---eEEEEECCCCC-ceEEEEEC-CEEEEeeCCC--CeEEE
Confidence 111111 258888999998643 34689999998654 34555443222 34555544 7888876443 57888
Q ss_pred EECCCCceeeeec
Q psy2521 448 HDLNTGKRLHSFP 460 (783)
Q Consensus 448 ~dl~~G~~~~~l~ 460 (783)
++..+|+.++.|.
T Consensus 314 ~~~~~G~~~~~i~ 326 (386)
T 3v65_B 314 ANKFTGKNQEIIR 326 (386)
T ss_dssp EETTTCCSCEEEE
T ss_pred EECCCCcceEEEc
Confidence 8855777655443
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=98.06 E-value=0.0018 Score=71.45 Aligned_cols=235 Identities=9% Similarity=0.086 Sum_probs=130.2
Q ss_pred ECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceE
Q psy2521 216 FSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294 (783)
Q Consensus 216 ~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v 294 (783)
+++|+++|+-+.. + ..|++||+.+++.+.... .......++|+|++ .|+-.. . ...|
T Consensus 128 ~~~~~~~l~sgs~-d----g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s-~---------------dg~i 185 (464)
T 3v7d_B 128 LQFEDNYVITGAD-D----KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGS-T---------------DRTV 185 (464)
T ss_dssp EEEETTEEEEEET-T----SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEE-T---------------TSCE
T ss_pred EEECCCEEEEEcC-C----CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEe-C---------------CCCE
Confidence 4557777775543 2 459999999998654221 22233578999988 343333 1 2358
Q ss_pred EEEEcCCCCCCceeEEecCCCCeeEEEEEEe--cCCcEEEEEEecCCCCcEEEEEECCCCCCCccc-C--CCC-------
Q psy2521 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVT--DCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS-G--KFP------- 362 (783)
Q Consensus 295 ~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~S--pDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~-~--~~~------- 362 (783)
.++++.+.. ....+..... ....+.++ +++++|+....+ ..|.++|+.++...... . ..+
T Consensus 186 ~vwd~~~~~--~~~~~~~h~~--~v~~l~~~~~~~~~~l~s~s~d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 186 RVWDIKKGC--CTHVFEGHNS--TVRCLDIVEYKNIKYIVTGSRD----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp EEEETTTTE--EEEEECCCSS--CEEEEEEEESSSCEEEEEEETT----SCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred EEEECCCCc--EEEEECCCCC--ccEEEEEecCCCCCEEEEEcCC----CcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 888887642 2233332222 23455566 678877654322 57888998773211000 0 000
Q ss_pred ----ceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 363 ----LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 363 ----~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
......+.......++++++.++..+.. +.|..+|+.++. ....+..+. .. +..+.+..++..+++..
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d----~~i~vwd~~~~~--~~~~~~~~~-~~-v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD----NTLIVWDVAQMK--CLYILSGHT-DR-IYSTIYDHERKRCISAS 329 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETT----SCEEEEETTTTE--EEEEECCCS-SC-EEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCC----CeEEEEECCCCc--EEEEecCCC-CC-EEEEEEcCCCCEEEEEe
Confidence 0112222233333578888887765543 458888987654 122232222 33 33444433345555666
Q ss_pred cCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++ .|.+||+.+|+.+..+....+.+..+..+ ++ .+++.+. -..+..+|+
T Consensus 330 ~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~s~---dg~v~vwd~ 379 (464)
T 3v7d_B 330 MDT--TIRIWDLENGELMYTLQGHTALVGLLRLS--DK-FLVSAAA---DGSIRGWDA 379 (464)
T ss_dssp TTS--CEEEEETTTTEEEEEECCCSSCEEEEEEC--SS-EEEEEET---TSEEEEEET
T ss_pred CCC--cEEEEECCCCcEEEEEeCCCCcEEEEEEc--CC-EEEEEeC---CCcEEEEEC
Confidence 654 58999998898877777665556666554 23 3333332 347889998
|
| >2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=2.5e-06 Score=93.74 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=76.4
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCE---EEEEecCCCCCCC----------ChhHHhhcc-----------
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNG---IYAIPNIRGGGEL----------GEDWHNAGR----------- 608 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~RG~g~~----------G~~~~~~g~----------- 608 (783)
...|.||++||..+.... |.. +...|.++|| .|+.+|+||.|.. |. +...+.
T Consensus 20 ~~~ppVVLlHG~g~s~~~--w~~-la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~-~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAGQ--FES-QGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGL-GSEFGLNISQIIDPETL 95 (484)
T ss_dssp -CCCCEEEECCTTCCGGG--GHH-HHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTG-GGHHHHHHGGGSCHHHH
T ss_pred CCCCEEEEECCCCCCHHH--HHH-HHHHHHHcCCCcceEEEEECCCCCcccccccccccccc-ccccccccccccccccc
Confidence 356789999998765543 443 4455666799 6999999995421 10 000000
Q ss_pred --------ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCcch
Q psy2521 609 --------LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGALD 671 (783)
Q Consensus 609 --------~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~~d 671 (783)
.......++++.+.++.++++- ..+++.++||||||+++..++.++|+ .++++|+..|..+
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0011234677777888877652 33689999999999999999999884 7899999888765
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0003 Score=77.21 Aligned_cols=159 Identities=9% Similarity=0.099 Sum_probs=94.8
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC-Ccccc--------ccccccccCeeEEeeCC-CEEEEEEeecCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT-GKDYP--------EVLKNVKFPSISWTHDH-KGFFYNQYCDIN 278 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t-g~~~~--------~~~~~~~~~~~~WspDg-~~l~y~~~~~~~ 278 (783)
..+..++|||||++|+.+ + + ..|++||+.+ ++.+. ..........++|+|++ +.|+....
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~-d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~---- 247 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-D-D----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS---- 247 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-C-S----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET----
T ss_pred cceEEEEEcCCCCEEEEe-C-C----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC----
Confidence 346789999999999865 2 2 4799999984 33222 11112223689999999 66665552
Q ss_pred CCCCCCcccccCCceEEEEEcCCCCCC--ceeEEecCCCC----------eeEEEEEEecCCcEEEEEEecCCCCcEEEE
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQDK--DIPVVEFPNGR----------SLGLHSEVTDCGRYLLVSTSNNTQGSDLHY 346 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~~~--d~~v~~~~~~~----------~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~ 346 (783)
...|.++++.+.... ...++.....+ .....+.|+|||++|+... . ..|.+
T Consensus 248 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~----~-~~v~i 310 (447)
T 3dw8_B 248 ------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD----Y-LSVKV 310 (447)
T ss_dssp ------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE----S-SEEEE
T ss_pred ------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee----C-CeEEE
Confidence 225788888765421 12344443220 0346889999999988532 3 68999
Q ss_pred EECCC-CCCCcccCCCCceeeecCcc--c-------------ee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 347 FDLHS-LPDGKISGKFPLKTVIPGMD--H-------------HH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 347 ~dl~~-g~~~~l~~~~~~~~l~~~~~--~-------------~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
+|+.. +. +...+..... . .. ..|+|+|+.|+. ... ++.|..+|+.++.
T Consensus 311 wd~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s-~s~---dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 311 WDLNMENR--------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMT-GSY---NNFFRMFDRNTKR 375 (447)
T ss_dssp EETTCCSS--------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEE-ECS---TTEEEEEETTTCC
T ss_pred EeCCCCcc--------ccceeeccccccccccccccccccccceEEEECCCCCEEEE-ecc---CCEEEEEEcCCCc
Confidence 99975 21 1111111100 0 01 259999988754 332 3568888887654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.0018 Score=70.79 Aligned_cols=204 Identities=8% Similarity=0.018 Sum_probs=114.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
...+++|+|||+ +|..+..+ ..|+++|++++............. ++|+|+++.||.+...
T Consensus 132 ~P~~la~d~~g~--lyv~d~~~---~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~-------------- 191 (409)
T 3hrp_A 132 YMWGIAAVGNNT--VLAYQRDD---PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWE-------------- 191 (409)
T ss_dssp CEEEEEECSTTE--EEEEETTT---TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSS--------------
T ss_pred CceEEEEeCCCC--EEEEecCC---CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecC--------------
Confidence 456789999998 45555432 469999999887654322222223 9999999977766521
Q ss_pred CCceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee--
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV-- 366 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l-- 366 (783)
....|++.+..+... ...+-.. +.......+++++|++.+|++. .. ...|+.+|.+++. ...+
T Consensus 192 ~~~~I~~~d~~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~---~~~I~~~d~~~~~---------~~~~~~ 257 (409)
T 3hrp_A 192 GTHTVYVYMKASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFV-DS---NKNFGRFNVKTQE---------VTLIKQ 257 (409)
T ss_dssp TTCEEEEEEGGGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEE-CT---TCEEEEEETTTCC---------EEEEEE
T ss_pred CCceEEEEEcCCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEE-EC---CCcEEEEECCCCC---------EEEEec
Confidence 122688877654432 1111010 1011122467889977777763 21 3589999998731 1111
Q ss_pred --ecC-ccce---eEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-C------------CceEEEEEE
Q psy2521 367 --IPG-MDHH---HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-E------------NRTLDVVAA 427 (783)
Q Consensus 367 --~~~-~~~~---~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~------------~~~l~~~~~ 427 (783)
..+ .... .-.|+|+++.||+... .+.+|++++.++. ...+.... . -.....+.+
T Consensus 258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~---~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~ 330 (409)
T 3hrp_A 258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQ---NLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTV 330 (409)
T ss_dssp CCCCSCCCCSSCCEEEEETTTTEEEEEET---TTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred ccccCCCCCCccccEEEeCCCCEEEEEeC---CCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence 111 1111 2258887788887543 3467999998653 23332221 0 011234555
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
..++.|++... .+..+|+++++.+|+.
T Consensus 331 d~dG~lyvad~-~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 331 DEDGNFYIVDG-FKGYCLRKLDILDGYV 357 (409)
T ss_dssp CTTCCEEEEET-TTTCEEEEEETTTTEE
T ss_pred eCCCCEEEEeC-CCCCEEEEEECCCCEE
Confidence 54456776643 1336799999657764
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=0.0054 Score=64.51 Aligned_cols=244 Identities=11% Similarity=0.125 Sum_probs=130.1
Q ss_pred EeeEEECCCCcEEEEEEecCCCce---------------------EEEEEEECCCCccccccccc--cccCeeEEeeCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDW---------------------NTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDHK 267 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~---------------------~~i~v~Dl~tg~~~~~~~~~--~~~~~~~WspDg~ 267 (783)
+.+++++|||+.++ .+..+..+ .+|+++|.++|+.+...... ....+++++|||+
T Consensus 26 v~~va~d~~G~l~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 26 VSGVALDSKNNLVI--FHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp EEEEEECTTCCEEE--EECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred ceEEEECCCCCEEE--EeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 67899999998664 33222111 26999999988865322111 1235789999998
Q ss_pred EEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec-------CCCCeeEEEEEEecCCcEEEEEEecCCC
Q psy2521 268 GFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF-------PNGRSLGLHSEVTDCGRYLLVSTSNNTQ 340 (783)
Q Consensus 268 ~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~-------~~~~~~~~~~~~SpDGk~l~~~~~~~~~ 340 (783)
||++.. ...+|++++...... .+..+.. ...-..-.+++++|++..|++.... .
T Consensus 104 -l~v~d~---------------~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~--~ 164 (329)
T 3fvz_A 104 -YWVTDV---------------ALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY--C 164 (329)
T ss_dssp -EEEEET---------------TTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS--S
T ss_pred -EEEEEC---------------CCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC--C
Confidence 665541 234677777643311 1222221 0101123578999944444444321 2
Q ss_pred CcEEEEEECCCCCCCcccCCCCceeeec--C---------ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC
Q psy2521 341 GSDLHYFDLHSLPDGKISGKFPLKTVIP--G---------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK 408 (783)
Q Consensus 341 ~~~l~~~dl~~g~~~~l~~~~~~~~l~~--~---------~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~ 408 (783)
...|++++.++. ....+. + ...-.. .++++++.||+... .+.+|.+++.+++.
T Consensus 165 ~~~I~~~~~~g~----------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~---~~~~I~~~~~~~G~-- 229 (329)
T 3fvz_A 165 NSRIVQFSPSGK----------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR---ENGRIQCFKTDTKE-- 229 (329)
T ss_dssp CCEEEEECTTSC----------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---TTTEEEEEETTTCC--
T ss_pred CCeEEEEcCCCC----------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---CCCEEEEEECCCCc--
Confidence 368999985541 111111 0 000111 47888778887543 24579999987544
Q ss_pred CcEEeec-CCCCceEEEEEEeeCCEEEEEEec-----CCeeEEEEEECCCCceeeeecC---CCeEEEeeeccccccEEE
Q psy2521 409 NWKTLIP-EDENRTLDVVAAVANNKLIVHYIQ-----NVRSVMDLHDLNTGKRLHSFPL---DLGQITHISGRRKYNEVF 479 (783)
Q Consensus 409 ~~~~li~-~~~~~~l~~~~~~~g~~l~~~~~~-----~g~~~l~~~dl~~G~~~~~l~~---~~g~v~~~s~~~d~~~l~ 479 (783)
....+. .........+.+.. +.++..... .....++++++.+|+.+..+.. ......++..++++ .+|
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~ly 306 (329)
T 3fvz_A 230 -FVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVY 306 (329)
T ss_dssp -EEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEE
T ss_pred -EEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEE
Confidence 233332 11122222333333 344333221 1224789999888987766632 12334566677777 666
Q ss_pred EEEecCCCCceEEEEeC
Q psy2521 480 YGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 480 ~~~ss~~~P~~vy~~d~ 496 (783)
++-.. ..+|.++++
T Consensus 307 vad~~---~~~I~~~~~ 320 (329)
T 3fvz_A 307 IGDAH---TNTVWKFTL 320 (329)
T ss_dssp EEESS---SCCEEEEEE
T ss_pred EEECC---CCEEEEEeC
Confidence 55433 236777777
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00012 Score=82.89 Aligned_cols=244 Identities=11% Similarity=0.024 Sum_probs=130.7
Q ss_pred EEeeEEECCCC---------cEEEEEEecC--------------CCceEEEEEEECCCCcccc---cccc--ccccCeeE
Q psy2521 210 ALKLYAFSDNG---------KHFAYCLSKS--------------GSDWNTLHIKDVDTGKDYP---EVLK--NVKFPSIS 261 (783)
Q Consensus 210 ~l~~~~~SPDG---------~~la~~~~~~--------------G~d~~~i~v~Dl~tg~~~~---~~~~--~~~~~~~~ 261 (783)
.+..++|+|++ ++||.+.... |+...+|+|||+++++... .++. ......++
T Consensus 135 ~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~ 214 (524)
T 2j04_B 135 LVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLK 214 (524)
T ss_dssp --CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEE
T ss_pred ceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEE
Confidence 35667788887 7888766432 3445689999998876421 1111 12235789
Q ss_pred EeeC------CCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC---------ceeEEecCCCCeeEEEEEEec
Q psy2521 262 WTHD------HKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK---------DIPVVEFPNGRSLGLHSEVTD 326 (783)
Q Consensus 262 WspD------g~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~---------d~~v~~~~~~~~~~~~~~~Sp 326 (783)
|+|+ ++.|+-... ...|.++++.+.... ....+.... .....+.|++
T Consensus 215 wsp~~~~~~~~~~LAs~s~----------------DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~--~~v~sv~~s~ 276 (524)
T 2j04_B 215 WHEGCHAPHLVGCLSFVSQ----------------EGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD--SLITTFDFLS 276 (524)
T ss_dssp ECSSCCCSSSSCEEEEEET----------------TSCEEEEECCCCSSSSSEEECCCSCSEEECCTT--TCEEEEEESS
T ss_pred ECCCCCCCCCCceEEEEec----------------CCeEEEEEcCCCccccccceeecCceEEEEcCC--CCEEEEEecC
Confidence 9997 344443331 225777777654211 111222222 2356789998
Q ss_pred CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE----EEEeeCCEEEEEECCCCCCceEEEEcC
Q psy2521 327 CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE----IIANNGPELIVKTTKNAPKGKVVTINL 402 (783)
Q Consensus 327 DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~----~~s~dg~~l~~~t~~~~~~~~L~~~d~ 402 (783)
++ .|+... ....|.++|+.++. .+... ......... .++++|..+++.+.. ...|..+|+
T Consensus 277 ~~-~lasgs----~DgtV~lWD~~~~~-------~~~~~-~~~H~~~V~sv~~~~s~~g~~~laS~S~---D~tvklWD~ 340 (524)
T 2j04_B 277 PT-TVVCGF----KNGFVAEFDLTDPE-------VPSFY-DQVHDSYILSVSTAYSDFEDTVVSTVAV---DGYFYIFNP 340 (524)
T ss_dssp SS-EEEEEE----TTSEEEEEETTBCS-------SCSEE-EECSSSCEEEEEEECCTTSCCEEEEEET---TSEEEEECG
T ss_pred CC-eEEEEe----CCCEEEEEECCCCC-------CceEE-eecccccEEEEEEEcCCCCCeEEEEecc---CCeEEEEEC
Confidence 75 444322 23689999998631 11121 222222222 245666345444433 245888888
Q ss_pred CCCCCCCcEEeecCCCC-ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEE
Q psy2521 403 NNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYG 481 (783)
Q Consensus 403 ~~~~~~~~~~li~~~~~-~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~ 481 (783)
.++.. ...+..+... .+..-.+.++ +..++....++ .|.+||+.++..+..+....+.|..+.++|++..++ +
T Consensus 341 ~~~~~--~~~~~~~~~~~~v~~v~fsp~-~~~l~s~~~d~--tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~-S 414 (524)
T 2j04_B 341 KDIAT--TKTTVSRFRGSNLVPVVYCPQ-IYSYIYSDGAS--SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVL-A 414 (524)
T ss_dssp GGHHH--HCEEEEECSCCSCCCEEEETT-TTEEEEECSSS--EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCE-E
T ss_pred CCCCc--ccccccccccCcccceEeCCC-cCeEEEeCCCC--cEEEEECcccccceeeecCCCceEEEEeCCCCCeEE-E
Confidence 65431 1223222211 2222234444 44455554443 589999987776555655556788888899887554 3
Q ss_pred EecCCCCceEEEEeC
Q psy2521 482 FTSFLQPGTIYHCNI 496 (783)
Q Consensus 482 ~ss~~~P~~vy~~d~ 496 (783)
.+. -.++..+|+
T Consensus 415 gs~---Dgtv~lwd~ 426 (524)
T 2j04_B 415 GSA---DGSLIITNA 426 (524)
T ss_dssp EET---TTEEECCBS
T ss_pred EEC---CCEEEEEec
Confidence 222 246778887
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0013 Score=69.29 Aligned_cols=227 Identities=11% Similarity=0.036 Sum_probs=118.7
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEE
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 241 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~D 241 (783)
.+.++++.+|+.-..+ ..|++.+..++..+.+..++ .+..+.++|||+.++.. . ..|+++|
T Consensus 55 ~~~~~~~~l~~~d~~~----~~i~~~d~~~~~~~~~~~~~--------~v~~i~~~~dg~l~v~~--~-----~gl~~~d 115 (326)
T 2ghs_A 55 TFDPASGTAWWFNILE----RELHELHLASGRKTVHALPF--------MGSALAKISDSKQLIAS--D-----DGLFLRD 115 (326)
T ss_dssp EEETTTTEEEEEEGGG----TEEEEEETTTTEEEEEECSS--------CEEEEEEEETTEEEEEE--T-----TEEEEEE
T ss_pred eEeCCCCEEEEEECCC----CEEEEEECCCCcEEEEECCC--------cceEEEEeCCCeEEEEE--C-----CCEEEEE
Confidence 3445567788774332 35777665444333332111 26678899999976643 1 1399999
Q ss_pred CCCCccccccc-c----ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC
Q psy2521 242 VDTGKDYPEVL-K----NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR 316 (783)
Q Consensus 242 l~tg~~~~~~~-~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~ 316 (783)
+++|+...... . ......+.|+|||+ |+++...... ......||+.+ . . +-..+.....
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~---------~~~~~~l~~~~-~-g--~~~~~~~~~~-- 179 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKA---------ETGAGSIYHVA-K-G--KVTKLFADIS-- 179 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTC---------CTTCEEEEEEE-T-T--EEEEEEEEES--
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcC---------CCCceEEEEEe-C-C--cEEEeeCCCc--
Confidence 99887543211 1 11235788999997 6666533210 11234688877 2 2 1122222111
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC--CCCCCcccCCCCceeee--cCccc--eeEEEEeeCCEEEEEECC
Q psy2521 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH--SLPDGKISGKFPLKTVI--PGMDH--HHEIIANNGPELIVKTTK 390 (783)
Q Consensus 317 ~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~--~g~~~~l~~~~~~~~l~--~~~~~--~~~~~s~dg~~l~~~t~~ 390 (783)
...++.|||||++|++... ....|+++|++ +|. .+. ....+. ..... .--.++++|. ||+.+..
T Consensus 180 -~~~~i~~s~dg~~lyv~~~---~~~~I~~~d~~~~~Gl--~~~---~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~ 249 (326)
T 2ghs_A 180 -IPNSICFSPDGTTGYFVDT---KVNRLMRVPLDARTGL--PTG---KAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWG 249 (326)
T ss_dssp -SEEEEEECTTSCEEEEEET---TTCEEEEEEBCTTTCC--BSS---CCEEEEECTTSSSEEEEEEECTTSC-EEEEEET
T ss_pred -ccCCeEEcCCCCEEEEEEC---CCCEEEEEEcccccCC--ccc---CceEEEECCCCCCCCCeeEECCCCC-EEEEEeC
Confidence 2347899999999877642 23689999986 320 110 011111 10011 1113666664 6665432
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe--eCCEEEEEEecCC
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV--ANNKLIVHYIQNV 441 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~--~g~~l~~~~~~~g 441 (783)
...|++++.++.. ... +.-. ......+.+. +++.|++.....+
T Consensus 250 ---~~~v~~~d~~g~~---~~~-i~~~-~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 250 ---EGAVDRYDTDGNH---IAR-YEVP-GKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ---TTEEEEECTTCCE---EEE-EECS-CSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ---CCEEEEECCCCCE---EEE-EECC-CCCcEEEEEecCCCCEEEEEecCCC
Confidence 2469999984321 222 2222 2223344443 3356777666554
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0022 Score=68.38 Aligned_cols=234 Identities=11% Similarity=0.065 Sum_probs=135.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
.+..++|||||++||.+.+. .+++||+++++.+...... ....+.|+++++.++.+...
T Consensus 21 ~V~~v~fs~dg~~la~g~~~------~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------------- 79 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLK------SFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGV-------------- 79 (355)
T ss_dssp CCCEEEECTTSSEEEEECSS------EEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSS--------------
T ss_pred ceEEEEECCCCCEEEEEcCC------EEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECC--------------
Confidence 36789999999999865431 3678998877654321111 23578899999888776521
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...|.++++.++. .+..+.... ....+.+++++ +++.. ...|+++|+.++. ..+ ..+..
T Consensus 80 -d~~v~iWd~~~~~--~~~~~~~~~---~v~~v~~~~~~--~~~~~-----~~~i~i~d~~~~~-~~~------~~~~~- 138 (355)
T 3vu4_A 80 -KEVVHIWDDVKKQ--DVSRIKVDA---PVKDLFLSREF--IVVSY-----GDVISVFKFGNPW-KRI------TDDIR- 138 (355)
T ss_dssp -TTEEEEEETTTTE--EEEEEECSS---CEEEEEECSSE--EEEEE-----TTEEEEEESSTTC-CBS------SCCEE-
T ss_pred -ccEEEEEECCCCc--EEEEEECCC---ceEEEEEcCCE--EEEEE-----cCEEEEEECCCCc-eee------EEecc-
Confidence 2378888886642 222233221 23567777765 33321 2579999998731 111 11111
Q ss_pred ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCC------C-------C-cEEeecCCCCceEEEEEEeeCCEEEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCE------K-------N-WKTLIPEDENRTLDVVAAVANNKLIV 435 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~------~-------~-~~~li~~~~~~~l~~~~~~~g~~l~~ 435 (783)
......+++ ..+.+.+.. ..+.|..+|+.++.. . . ...+..+. . .+..+.+..++.+++
T Consensus 139 -~~~~~~~s~--~~la~~sg~--~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~-~v~~~~~s~~g~~l~ 211 (355)
T 3vu4_A 139 -FGGVCEFSN--GLLVYSNEF--NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-N-PIKMVRLNRKSDMVA 211 (355)
T ss_dssp -EEEEEEEET--TEEEEEESS--CTTCEEEEECCC------------------CCEEECCCS-S-CEEEEEECTTSSEEE
T ss_pred -CCceEEEEc--cEEEEeCCC--cCcEEEEEECCCCCccccccccccccccCcccEEEEccC-C-ceEEEEECCCCCEEE
Confidence 122224555 566654222 234577788765320 0 0 23333332 3 344444444466777
Q ss_pred EEecCCeeEEEEEECCCCceeeeec-C-CCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 436 HYIQNVRSVMDLHDLNTGKRLHSFP-L-DLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~~~~l~-~-~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
+...++. .|.+||+.+|+.+..+. . ..+.|..+.+++++..++.. +. -.++..+|+.
T Consensus 212 s~s~d~~-~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~-s~---d~~v~iw~~~ 270 (355)
T 3vu4_A 212 TCSQDGT-IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVV-SD---KWTLHVFEIF 270 (355)
T ss_dssp EEETTCS-EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEE-ET---TCEEEEEESS
T ss_pred EEeCCCC-EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEE-EC---CCEEEEEEcc
Confidence 7777751 28899998898888887 2 35667788889988765533 22 2578899983
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00038 Score=74.74 Aligned_cols=208 Identities=13% Similarity=0.104 Sum_probs=105.3
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccc-------cCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVK-------FPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~-------~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
.+.+||||++|..+ +...+ ..|.|+|+++++.+... ..++. ...++-++||+.+++.. ..
T Consensus 141 ~~a~spDGk~lyVa-n~~~~--~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~-~~-------- 208 (386)
T 3sjl_D 141 MTSLTPDGKTLLFY-QFSPA--PAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAF-GT-------- 208 (386)
T ss_dssp GEEECTTSSEEEEE-ECSSS--CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEEC-CS--------
T ss_pred eEEEcCCCCEEEEE-EcCCC--CeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEEC-CC--------
Confidence 48999999987654 32212 46999999999875422 22210 00124455554333322 10
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE-ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV-TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~-SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
..++-. .. + .++. ++....+..+.| ++||+.++ .+. ..+++++|+.++. ..+. .++
T Consensus 209 ------~g~v~~-~~-~------~~~~-~~~~~~~~~~~~~~~dG~~~~-vs~----~g~V~v~d~~~~~-~~v~--~~~ 265 (386)
T 3sjl_D 209 ------EGTPEI-TH-T------EVFH-PEDEFLINHPAYSQKAGRLVW-PTY----TGKIHQIDLSSGD-AKFL--PAV 265 (386)
T ss_dssp ------SSCCEE-EE-C------CCCS-CTTSCBCSCCEEETTTTEEEE-EBT----TSEEEEEECTTSS-CEEC--CCE
T ss_pred ------CCeEEE-ee-c------ceec-cccccccccceeEcCCCcEEE-EeC----CCEEEEEECCCCc-ceee--cce
Confidence 001100 00 0 0111 111112223455 47887554 322 2589999997731 1110 111
Q ss_pred eeee------cCc-ccee--EEEEeeCCEEEEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-
Q psy2521 364 KTVI------PGM-DHHH--EIIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA- 427 (783)
Q Consensus 364 ~~l~------~~~-~~~~--~~~s~dg~~l~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~- 427 (783)
. ++ .+. ..++ ..++++++++|+..+.+ .+...|+.+|+.+.+ ...-++-+ .....+.+
T Consensus 266 ~-~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~~~i~vg--~~~~~lavs 339 (386)
T 3sjl_D 266 E-ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFEMG--HEIDSINVS 339 (386)
T ss_dssp E-SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEEE--EEECEEEEC
T ss_pred e-ccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EEEEEECC--CCcceEEEC
Confidence 1 01 111 1111 24788999999975421 234579999998865 22233222 12223333
Q ss_pred eeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
.+++.+++.... +...|.++|..+++.++.+..+
T Consensus 340 ~D~~~~ly~tn~-~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 340 QDEKPLLYALST-GDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp SSSSCEEEEEET-TTTEEEEEETTTCCEEEEECCC
T ss_pred CCCCeEEEEEcC-CCCeEEEEECCCCcEEEEecCC
Confidence 443324444433 2357999999999998888775
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0082 Score=63.88 Aligned_cols=206 Identities=7% Similarity=0.003 Sum_probs=124.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..++.|++++++|.|+ +..+ ..|+.++++++........+ ....+++..+.+..||++..
T Consensus 75 ~~~l~~d~~~~~ly~~-D~~~---~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~--------------- 135 (349)
T 3v64_C 75 AIALDFHHRRELVFWS-DVTL---DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDS--------------- 135 (349)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---------------
T ss_pred eEEEEEeccccEEEEE-eccC---CceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcC---------------
Confidence 4678999988887665 3322 36999999887643322111 12357888878888888762
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP- 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~- 368 (783)
....|++.+++... ...+....- ..-.+++++|++++|+++... ....|+.+++++. . ...++.
T Consensus 136 ~~~~I~~~~~dG~~--~~~l~~~~l--~~P~~iavdp~~g~ly~td~~--~~~~I~r~~~dG~-~--------~~~~~~~ 200 (349)
T 3v64_C 136 GTSRIEVANLDGAH--RKVLLWQSL--EKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGS-G--------RRIIADT 200 (349)
T ss_dssp TTTEEEEEETTSCS--CEEEECTTC--SCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSC-S--------CEESCCS
T ss_pred CCCeEEEEcCCCCc--eEEEEeCCC--CCcceEEEecCcCeEEEeccC--CCCEEEEEeCCCC-C--------cEEEEEC
Confidence 12478888876542 223332211 122578899999998877543 2378999999872 1 112221
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
+...-. -.+++++++||+.-. ...+|.++++++.. .+.++..... .-.++.+.+ +.||++.... .+|.+
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~~---~~~~~~~~~~-~P~giav~~-~~ly~td~~~--~~V~~ 270 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH---RKAVISQGLP-HPFAITVFE-DSLYWTDWHT--KSINS 270 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEECSSCS-SEEEEEEET-TEEEEEETTT--TEEEE
T ss_pred CCCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCCc---eEEEEeCCCC-CceEEEEEC-CEEEEecCCC--CeEEE
Confidence 111111 148888999998643 34689999998754 3455544322 233555544 7888875544 47888
Q ss_pred EECCCCceeeeec
Q psy2521 448 HDLNTGKRLHSFP 460 (783)
Q Consensus 448 ~dl~~G~~~~~l~ 460 (783)
++..+|+..+.|.
T Consensus 271 ~~~~~G~~~~~i~ 283 (349)
T 3v64_C 271 ANKFTGKNQEIIR 283 (349)
T ss_dssp EETTTCCSCEEEE
T ss_pred EEccCCCccEEec
Confidence 8855777654443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0013 Score=67.89 Aligned_cols=243 Identities=9% Similarity=0.021 Sum_probs=124.4
Q ss_pred CCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEE
Q psy2521 161 SAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIK 240 (783)
Q Consensus 161 ~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~ 240 (783)
+++.++|+.+|+.-... ..|++.+..++ .+.+..+.. ...+++++|||+.++ .+. +. ..|+++
T Consensus 33 ~~~d~~g~~l~~~~~~~----~~i~~~~~~~~-~~~~~~~~~-------~~~~l~~~~dg~l~v--~~~-~~--~~i~~~ 95 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQ----NRTWAWSDDGQ-LSPEMHPSH-------HQNGHCLNKQGHLIA--CSH-GL--RRLERQ 95 (296)
T ss_dssp EEEEGGGTEEEEEEGGG----TEEEEEETTSC-EEEEESSCS-------SEEEEEECTTCCEEE--EET-TT--TEEEEE
T ss_pred CeEeCCCCEEEEEeCCC----CEEEEEECCCC-eEEEECCCC-------CcceeeECCCCcEEE--Eec-CC--CeEEEE
Confidence 34456677677765433 35666665444 444433221 256789999999543 222 11 369999
Q ss_pred ECCCCccccccc--cc---cccCeeEEeeCCCEEEEEEeec-CCCCCCCC-cccccCCceEEEEEcCCCCCCceeEEecC
Q psy2521 241 DVDTGKDYPEVL--KN---VKFPSISWTHDHKGFFYNQYCD-INGTADGT-ETTAHMGQKIYYHVLGTEQDKDIPVVEFP 313 (783)
Q Consensus 241 Dl~tg~~~~~~~--~~---~~~~~~~WspDg~~l~y~~~~~-~~~~~~g~-~~~~~~~~~v~~~~lgt~~~~d~~v~~~~ 313 (783)
|.++|+...... .. .....++++|||+ |+++.... ......+. .........||+.+.+ . +-..+...
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~- 170 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G--TLSAPIRD- 170 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S--CEEEEECC-
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C--CEEEeecC-
Confidence 998887543211 11 1234689999996 66653100 00000000 0001123468877654 1 21222221
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC-CCCCCcccCCCCceeeecCccce---eEEEEeeCCEEEEEEC
Q psy2521 314 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH-SLPDGKISGKFPLKTVIPGMDHH---HEIIANNGPELIVKTT 389 (783)
Q Consensus 314 ~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~-~g~~~~l~~~~~~~~l~~~~~~~---~~~~s~dg~~l~~~t~ 389 (783)
.....++.|+|||+.+ +... ....|+++++. +| .+. ....++ ..... --.++++|. ||+.+
T Consensus 171 --~~~~~gi~~s~dg~~l-v~~~---~~~~i~~~~~~~~g---~~~---~~~~~~-~~~~~~p~~i~~d~~G~-l~v~~- 235 (296)
T 3e5z_A 171 --RVKPNGLAFLPSGNLL-VSDT---GDNATHRYCLNARG---ETE---YQGVHF-TVEPGKTDGLRVDAGGL-IWASA- 235 (296)
T ss_dssp --CSSEEEEEECTTSCEE-EEET---TTTEEEEEEECSSS---CEE---EEEEEE-CCSSSCCCSEEEBTTSC-EEEEE-
T ss_pred --CCCCccEEECCCCCEE-EEeC---CCCeEEEEEECCCC---cCc---CCCeEe-eCCCCCCCeEEECCCCC-EEEEc-
Confidence 1233578999999998 5432 23689999986 32 110 001122 11111 114788875 77655
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE--eeCCEEEEEEecCCeeEEEEEECCCCc
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA--VANNKLIVHYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~--~~g~~l~~~~~~~g~~~l~~~dl~~G~ 454 (783)
...|.+++.++.. ...+..... ...+.+ .+++.|++... + .|+.+++.+.+
T Consensus 236 ----~~~v~~~~~~g~~----~~~~~~~~~--~~~~~f~~~d~~~L~v~t~-~---~l~~~~~~~~~ 288 (296)
T 3e5z_A 236 ----GDGVHVLTPDGDE----LGRVLTPQT--TSNLCFGGPEGRTLYMTVS-T---EFWSIETNVRG 288 (296)
T ss_dssp ----TTEEEEECTTSCE----EEEEECSSC--CCEEEEESTTSCEEEEEET-T---EEEEEECSCCB
T ss_pred ----CCeEEEECCCCCE----EEEEECCCC--ceeEEEECCCCCEEEEEcC-C---eEEEEEccccc
Confidence 2469999986422 233332222 223333 33345666553 3 58888885543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=97.96 E-value=0.0021 Score=67.70 Aligned_cols=223 Identities=10% Similarity=-0.018 Sum_probs=128.0
Q ss_pred EEEEecC--CCceEEEEEEECCCCcccccccc-------ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceE
Q psy2521 224 AYCLSKS--GSDWNTLHIKDVDTGKDYPEVLK-------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294 (783)
Q Consensus 224 a~~~~~~--G~d~~~i~v~Dl~tg~~~~~~~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v 294 (783)
+|.+..+ |++...|.++|.+|++.+..... +....++.+ +++.+|.+... ...|
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~---------------~~~v 66 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNN---------------SHVI 66 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGG---------------GTEE
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcC---------------CCEE
Confidence 4556654 44457899999999986542211 001123444 56777777632 2468
Q ss_pred EEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc----
Q psy2521 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM---- 370 (783)
Q Consensus 295 ~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~---- 370 (783)
.+++..+..... .+.....+ ..+.+++|| .|++.. . ....|+++|+.++. + ...+..+.
T Consensus 67 ~viD~~t~~~~~--~i~~~~~p---~~i~~~~~g-~lyv~~-~--~~~~v~~iD~~t~~---~-----~~~i~~g~~~~~ 129 (328)
T 3dsm_A 67 FAIDINTFKEVG--RITGFTSP---RYIHFLSDE-KAYVTQ-I--WDYRIFIINPKTYE---I-----TGYIECPDMDME 129 (328)
T ss_dssp EEEETTTCCEEE--EEECCSSE---EEEEEEETT-EEEEEE-B--SCSEEEEEETTTTE---E-----EEEEECTTCCTT
T ss_pred EEEECcccEEEE--EcCCCCCC---cEEEEeCCC-eEEEEE-C--CCCeEEEEECCCCe---E-----EEEEEcCCcccc
Confidence 888887653211 12222222 467888999 554443 1 23689999998741 1 01111111
Q ss_pred ---cceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC------
Q psy2521 371 ---DHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV------ 441 (783)
Q Consensus 371 ---~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g------ 441 (783)
.... .+ ++++||+... + ....|..+|+++.+ ....++.. ... ..+.+..++.+++....+.
T Consensus 130 ~~~p~~i-~~--~~~~lyv~~~-~-~~~~v~viD~~t~~---~~~~i~~g-~~p-~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 130 SGSTEQM-VQ--YGKYVYVNCW-S-YQNRILKIDTETDK---VVDELTIG-IQP-TSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp TCBCCCE-EE--ETTEEEEEEC-T-TCCEEEEEETTTTE---EEEEEECS-SCB-CCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred CCCcceE-EE--ECCEEEEEcC-C-CCCEEEEEECCCCe---EEEEEEcC-CCc-cceEEcCCCCEEEEECCCccCCccc
Confidence 1111 23 7888887642 1 13479999998754 23333332 111 2333344467776655431
Q ss_pred --eeEEEEEECCCCceeeeecCCCe-EEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 --RSVMDLHDLNTGKRLHSFPLDLG-QITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 --~~~l~~~dl~~G~~~~~l~~~~g-~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
...|+++|.++++....+..+.| ...++..+++++.+|+.-+ .++++|+
T Consensus 200 ~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~------~v~~~d~ 251 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN------DIWRMPV 251 (328)
T ss_dssp BCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS------SEEEEET
T ss_pred cCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc------EEEEEEC
Confidence 26899999988887667766522 3456777888888887532 7999999
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00029 Score=73.94 Aligned_cols=115 Identities=15% Similarity=0.088 Sum_probs=69.6
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccc-ccccc--ccccCeeEEeeC--CCEEEEEEeecCCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDY-PEVLK--NVKFPSISWTHD--HKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~-~~~~~--~~~~~~~~WspD--g~~l~y~~~~~~~~~~~g~ 284 (783)
.+..++|||||++||-+.. ..+|++||+.++... ..++. ......++|+|+ ++.|+-...
T Consensus 15 ~V~~v~~s~~g~~lasgs~-----D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---------- 79 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSS-----DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY---------- 79 (316)
T ss_dssp CEEEEEECGGGCEEEEEET-----TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET----------
T ss_pred eEEEeeEcCCCCEEEEEeC-----CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC----------
Confidence 4778999999999886543 257999999887532 11222 222357899864 666664442
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC--CcEEEEEEecCCCCcEEEEEECCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC--GRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD--Gk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
...|.++++.+........+.. +......+.|+|| |++|+.... ...|.++|+.+
T Consensus 80 ------D~~v~iWd~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~----D~~i~lwd~~~ 136 (316)
T 3bg1_A 80 ------DRKVIIWREENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSS----DGAISLLTYTG 136 (316)
T ss_dssp ------TSCEEEECCSSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECS----SSCEEEEEECS
T ss_pred ------CCEEEEEECCCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcC----CCCEEEEecCC
Confidence 2357778876543222222222 2223457899998 777664322 25678888765
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=97.94 E-value=0.0046 Score=67.88 Aligned_cols=215 Identities=11% Similarity=0.120 Sum_probs=119.5
Q ss_pred EEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecC
Q psy2521 235 NTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 313 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~ 313 (783)
..|+++|+.+++.+..... ......+.| |++.|+.... ...|.++++.+.. .+....
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~----------------dg~i~iwd~~~~~----~~~~~~ 276 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAY----------------DFMVKVWDPETET----CLHTLQ 276 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEET----------------TSCEEEEEGGGTE----EEEEEC
T ss_pred CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcC----------------CCEEEEEECCCCc----EeEEec
Confidence 4688888887765432211 111234445 6666655442 2357777765432 222222
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCC
Q psy2521 314 NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAP 393 (783)
Q Consensus 314 ~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~ 393 (783)
........+.+ ||++++....+ ..|.++|+.++. ......+.......++++++.|+..+.
T Consensus 277 ~~~~~v~~~~~--~~~~l~~~~~d----~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~l~~~~~---- 337 (445)
T 2ovr_B 277 GHTNRVYSLQF--DGIHVVSGSLD----TSIRVWDVETGN---------CIHTLTGHQSLTSGMELKDNILVSGNA---- 337 (445)
T ss_dssp CCSSCEEEEEE--CSSEEEEEETT----SCEEEEETTTCC---------EEEEECCCCSCEEEEEEETTEEEEEET----
T ss_pred CCCCceEEEEE--CCCEEEEEeCC----CeEEEEECCCCC---------EEEEEcCCcccEEEEEEeCCEEEEEeC----
Confidence 12222344555 89888755332 579999998741 111222223333346678886665443
Q ss_pred CceEEEEcCCCCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec-----CCCeEEE
Q psy2521 394 KGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-----LDLGQIT 467 (783)
Q Consensus 394 ~~~L~~~d~~~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-----~~~g~v~ 467 (783)
++.|..+|+.++. ....+.... ....+..+.+ + +.++++...++ .|.+||+.+|+.+..+. ...+.+.
T Consensus 338 dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~-~-~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~ 411 (445)
T 2ovr_B 338 DSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQF-N-KNFVITSSDDG--TVKLWDLKTGEFIRNLVTLESGGSGGVVW 411 (445)
T ss_dssp TSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEE-C-SSEEEEEETTS--EEEEEETTTCCEEEEEEECTTGGGTCEEE
T ss_pred CCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEE-C-CCEEEEEeCCC--eEEEEECCCCceeeeeeccccCCCCceEE
Confidence 2458888887654 123332211 1233444444 3 34455555554 68999998898777662 1256777
Q ss_pred eeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 468 HISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 468 ~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+.+++++..++.....-+.+..++.+|+
T Consensus 412 ~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 412 RIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp EEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred EEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 88888877555544444444677999998
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.94 E-value=0.016 Score=60.78 Aligned_cols=218 Identities=11% Similarity=0.103 Sum_probs=125.7
Q ss_pred EEEEEEECCCCcc-cccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec
Q psy2521 235 NTLHIKDVDTGKD-YPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312 (783)
Q Consensus 235 ~~i~v~Dl~tg~~-~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~ 312 (783)
..|+.+|++++.. ....+.+. ....+.|.+.+..||++.. ...+|++..+.+......++...
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~---------------~~~~I~r~~~~g~~~~~~~~~~~ 77 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV---------------SEEAIKRTEFNKTESVQNVVVSG 77 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET---------------TTTEEEEEETTSSSCCCEEEEEC
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC---------------CCCcEEEEEccCCCceEEEEcCC
Confidence 6799999988741 11112211 2247899998888988862 13478888887653222333332
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-cCccceeE-EEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~-~~~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
...+ .++++.+.++.|++... ....|.++++++. . ...+. .+...-.. .++|.++.||+....
T Consensus 78 l~~p---~glavd~~~g~ly~~d~---~~~~I~~~~~dG~-~--------~~~l~~~~~~~P~giavdp~~g~ly~td~~ 142 (318)
T 3sov_A 78 LLSP---DGLACDWLGEKLYWTDS---ETNRIEVSNLDGS-L--------RKVLFWQELDQPRAIALDPSSGFMYWTDWG 142 (318)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSC-S--------CEEEECSSCSSEEEEEEEGGGTEEEEEECS
T ss_pred CCCc---cEEEEEcCCCeEEEEEC---CCCEEEEEECCCC-c--------EEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence 2223 36788888888877643 2368999998762 1 12222 12111112 477878888875422
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecC-CCeEEEe
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITH 468 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-~~g~v~~ 468 (783)
.+.+|+++++++.. .+.++... -..-.++.+. +++.||+.... ..+|+++++ +|+..+.+.. ..+.-.+
T Consensus 143 --~~~~I~r~~~dG~~---~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~--~~~I~~~d~-dG~~~~~~~~~~~~~P~g 213 (318)
T 3sov_A 143 --EVPKIERAGMDGSS---RFIIINSE-IYWPNGLTLDYEEQKLYWADAK--LNFIHKSNL-DGTNRQAVVKGSLPHPFA 213 (318)
T ss_dssp --SSCEEEEEETTSCS---CEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEET-TSCSCEEEECSCCSCEEE
T ss_pred --CCCEEEEEEcCCCC---eEEEEECC-CCCccEEEEeccCCEEEEEECC--CCEEEEEcC-CCCceEEEecCCCCCceE
Confidence 34679999998754 34454433 2233455554 35788887654 368999999 5654444422 1122223
Q ss_pred eeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 469 ISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 469 ~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.. +++.+|++ .+ .-..|+++|.
T Consensus 214 lav--~~~~lywt--d~-~~~~V~~~~~ 236 (318)
T 3sov_A 214 LTL--FEDILYWT--DW-STHSILACNK 236 (318)
T ss_dssp EEE--ETTEEEEE--ET-TTTEEEEEET
T ss_pred EEE--eCCEEEEE--ec-CCCeEEEEEC
Confidence 332 34566655 22 3457888887
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00033 Score=76.57 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=106.9
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
++.+||||++|..+. ... ...|.|+|+++++.+... ..++ ..-.|+|+..|+....+
T Consensus 181 ~~~~spDGk~lyV~n-~~~--~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~d--------------- 238 (426)
T 3c75_H 181 MNALTPDNKNLLFYQ-FSP--APAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRD--------------- 238 (426)
T ss_dssp GSEECTTSSEEEEEE-CSS--SCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETT---------------
T ss_pred eEEEcCCCCEEEEEe-cCC--CCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCC---------------
Confidence 589999999876653 221 246999999999865421 2211 11224443333332111
Q ss_pred ceEEEEEcCCCCCCce--eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee---
Q psy2521 292 QKIYYHVLGTEQDKDI--PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV--- 366 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~--~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l--- 366 (783)
.++.+.++.+.....+ .++.....+ .+..+.+++||+.+++... ...++++|+.++. ..+ ..++...
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p-~~~~~~~~~dg~~~~~~s~----~g~V~ViD~~~~~-~~v--~~~~~~~~~~ 310 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDEL-LINHPAFSLRSGRLVWPTY----TGKIFQADLTAEG-ATF--RAPIEALTEA 310 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSC-BCSCCEECTTTCEEEEEBT----TSEEEEEEECSSC-EEE--CCCEESSCTT
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCc-eeeEeeecCCCCEEEEEeC----CCcEEEEeccCCc-eEE--eeeeeecccc
Confidence 1122223211110000 011111122 2234567999999887643 2589999986521 000 0011100
Q ss_pred --ecCc-cce--eEEEEeeCCEEEEEEC-CC-----CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEE
Q psy2521 367 --IPGM-DHH--HEIIANNGPELIVKTT-KN-----APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIV 435 (783)
Q Consensus 367 --~~~~-~~~--~~~~s~dg~~l~~~t~-~~-----~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~ 435 (783)
..+. ..+ .-.+++||+++|+... .. .+...|..+|+.+.+ ...-++-+ .....-....+++.+++
T Consensus 311 ~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---vv~~I~vg-~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 311 ERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---RINKIELG-HEIDSINVSQDAEPLLY 386 (426)
T ss_dssp TGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEEE-EEECEEEECCSSSCEEE
T ss_pred ccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe---EEEEEECC-CCcCeEEEccCCCEEEE
Confidence 0000 011 1258999999998642 11 123579999998765 22223222 11222223344442555
Q ss_pred EEecCCeeEEEEEECCCCceeeee
Q psy2521 436 HYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
..... ...|.++|+.+++.++.|
T Consensus 387 v~n~~-s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 387 ALSAG-TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEETT-TTEEEEEETTTCCEEEEE
T ss_pred EEcCC-CCeEEEEECCCCCEEEEe
Confidence 44432 357999999999988777
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=97.90 E-value=0.0032 Score=65.53 Aligned_cols=117 Identities=9% Similarity=-0.032 Sum_probs=68.7
Q ss_pred EEeeEEECC--CCcEEEEEEecCCCceEEEEEEECCCCcc---------cc-ccccccccCeeEEeeC--CCEEEEEEee
Q psy2521 210 ALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKD---------YP-EVLKNVKFPSISWTHD--HKGFFYNQYC 275 (783)
Q Consensus 210 ~l~~~~~SP--DG~~la~~~~~~G~d~~~i~v~Dl~tg~~---------~~-~~~~~~~~~~~~WspD--g~~l~y~~~~ 275 (783)
.+..++|+| ||++|+.+... ..|++||+.+++. +. ..........++|+|+ ++.|+....
T Consensus 59 ~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~- 132 (351)
T 3f3f_A 59 SIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN- 132 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-
T ss_pred cEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-
Confidence 478899999 69988866532 4599999988742 11 1111223357899999 887776652
Q ss_pred cCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec---------CCCCeeEEEEEEecC---CcEEEEEEecCCCCcE
Q psy2521 276 DINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF---------PNGRSLGLHSEVTDC---GRYLLVSTSNNTQGSD 343 (783)
Q Consensus 276 ~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~---------~~~~~~~~~~~~SpD---Gk~l~~~~~~~~~~~~ 343 (783)
...|+++++.+.......-... .........+.|+|+ ++.++..... ..
T Consensus 133 ---------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~~ 193 (351)
T 3f3f_A 133 ---------------DGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALE----QA 193 (351)
T ss_dssp ---------------TCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETT----EE
T ss_pred ---------------CCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCC----Cc
Confidence 2367788876654322111100 011122457889997 8877765432 34
Q ss_pred EEEEECCC
Q psy2521 344 LHYFDLHS 351 (783)
Q Consensus 344 l~~~dl~~ 351 (783)
+.+.+...
T Consensus 194 ~~~~~~~~ 201 (351)
T 3f3f_A 194 IIYQRGKD 201 (351)
T ss_dssp EEEEECTT
T ss_pred EEEEccCC
Confidence 44444444
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.005 Score=66.58 Aligned_cols=217 Identities=9% Similarity=0.008 Sum_probs=123.4
Q ss_pred EEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC
Q psy2521 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN 314 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~ 314 (783)
..|+.++++++.............+++|.+.+..||++.. ...+|++.++.+...+ .++.....
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~---------------~~~~I~r~~~~g~~~~-~~~~~~~~ 159 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV---------------TLDRILRANLNGSNVE-EVVSTGLE 159 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET---------------TTTEEEEEETTSCCEE-EEECSSCS
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC---------------CCCcEEEEecCCCCcE-EEEeCCCC
Confidence 3588899987765432222222358999988888988862 1347888888654321 12211111
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECCCC
Q psy2521 315 GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNA 392 (783)
Q Consensus 315 ~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~~~ 392 (783)
.+ .++++.+.++.|++.... ...|+++++++.. ...++. +...-.. .++|+++.||+.... .
T Consensus 160 ~p---~glavd~~~g~lY~~d~~---~~~I~~~~~dg~~---------~~~l~~~~l~~P~giavdp~~g~ly~td~~-~ 223 (386)
T 3v65_B 160 SP---GGLAVDWVHDKLYWTDSG---TSRIEVANLDGAH---------RKVLLWQSLEKPRAIALHPMEGTIYWTDWG-N 223 (386)
T ss_dssp CC---CCEEEETTTTEEEEEETT---TTEEEECBTTSCS---------CEEEECSSCSCEEEEEEETTTTEEEEEECS-S
T ss_pred Cc---cEEEEEeCCCeEEEEcCC---CCeEEEEeCCCCc---------eEEeecCCCCCCcEEEEEcCCCeEEEeccC-C
Confidence 22 357888888888776432 3689999987621 122222 1111112 477888888875432 2
Q ss_pred CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecC-CCeEEEeee
Q psy2521 393 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-DLGQITHIS 470 (783)
Q Consensus 393 ~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-~~g~v~~~s 470 (783)
..+|+++++++.. .+.++... -..-.++.+. +++.||+..... .+|+++++ +|...+.+.. ..+...++.
T Consensus 224 -~~~I~r~~~dG~~---~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~--~~I~~~d~-dG~~~~~~~~~~~~~P~gia 295 (386)
T 3v65_B 224 -TPRIEASSMDGSG---RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANL-DGSHRKAVISQGLPHPFAIT 295 (386)
T ss_dssp -SCEEEEEETTSCS---CEEEECSS-CSCEEEEEEEGGGTEEEEEETTT--TEEEEECT-TSCSCEEEECSSCSSEEEEE
T ss_pred -CCEEEEEeCCCCC---cEEEEECC-CCCeeeEEEeCCCCEEEEEECCC--CEEEEEeC-CCCeeEEEEECCCCCceEEE
Confidence 3679999998754 34454433 2223455554 457888876543 58999998 5654333322 122222333
Q ss_pred ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 471 GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 471 ~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
. +++.+|++- + .-.+|.++|.
T Consensus 296 v--~~~~ly~td--~-~~~~V~~~~~ 316 (386)
T 3v65_B 296 V--FEDSLYWTD--W-HTKSINSANK 316 (386)
T ss_dssp E--ETTEEEEEE--T-TTTEEEEEET
T ss_pred E--ECCEEEEee--C-CCCeEEEEEC
Confidence 3 334566543 2 2346788874
|
| >3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A | Back alignment and structure |
|---|
Probab=97.90 E-value=3.7e-05 Score=81.58 Aligned_cols=102 Identities=15% Similarity=0.065 Sum_probs=67.6
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~~ 631 (783)
+..|.|+++||+.+.... |... ...|. .++.|+.+|.+|. |..... ...++++.+. ++.+.+..
T Consensus 99 g~~~~l~~lhg~~~~~~~--~~~l-~~~L~-~~~~v~~~d~~g~---~~~~~~-------~~~~~~~a~~~~~~i~~~~- 163 (329)
T 3tej_A 99 GNGPTLFCFHPASGFAWQ--FSVL-SRYLD-PQWSIIGIQSPRP---NGPMQT-------AANLDEVCEAHLATLLEQQ- 163 (329)
T ss_dssp CSSCEEEEECCTTSCCGG--GGGG-GGTSC-TTCEEEEECCCTT---TSHHHH-------CSSHHHHHHHHHHHHHHHC-
T ss_pred CCCCcEEEEeCCcccchH--HHHH-HHhcC-CCCeEEEeeCCCC---CCCCCC-------CCCHHHHHHHHHHHHHHhC-
Confidence 456889999998776433 3322 23344 4899999999994 332211 1234555443 33333321
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhc---CCCceeEEEEcCCcc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQ---RPELYGAALILVGAL 670 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~---~p~lf~a~i~~~~~~ 670 (783)
...++.++|||+||.++..++.+ +|+....++...+..
T Consensus 164 -~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~ 204 (329)
T 3tej_A 164 -PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWP 204 (329)
T ss_dssp -SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred -CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCC
Confidence 12579999999999999999988 999988888776544
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.01 Score=63.20 Aligned_cols=216 Identities=9% Similarity=0.011 Sum_probs=122.2
Q ss_pred EEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCC
Q psy2521 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG 315 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~ 315 (783)
.|+.+++++..............+++|.+.+..||++.. ...+|++.++.+...+ .++......
T Consensus 54 ~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~---------------~~~~I~r~~~~g~~~~-~~~~~~~~~ 117 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV---------------TLDRILRANLNGSNVE-EVVSTGLES 117 (349)
T ss_dssp CEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET---------------TTTEEEEEETTSCSCE-EEECSSCSC
T ss_pred ceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec---------------cCCceEEEecCCCCce-EEEeCCCCC
Confidence 488888877654332211122357899998888988862 1347888888764322 222211122
Q ss_pred CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECCCCC
Q psy2521 316 RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTKNAP 393 (783)
Q Consensus 316 ~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~~~~ 393 (783)
+ .++++.+.++.|++.... ...|+++++++. . ...+.. +...-.. .++|.++.||+.... .
T Consensus 118 p---~glavd~~~g~ly~~d~~---~~~I~~~~~dG~-~--------~~~l~~~~l~~P~~iavdp~~g~ly~td~~-~- 180 (349)
T 3v64_C 118 P---GGLAVDWVHDKLYWTDSG---TSRIEVANLDGA-H--------RKVLLWQSLEKPRAIALHPMEGTIYWTDWG-N- 180 (349)
T ss_dssp C---CEEEEETTTTEEEEEETT---TTEEEEEETTSC-S--------CEEEECTTCSCEEEEEEETTTTEEEEEECS-S-
T ss_pred c---cEEEEecCCCeEEEEcCC---CCeEEEEcCCCC-c--------eEEEEeCCCCCcceEEEecCcCeEEEeccC-C-
Confidence 2 467888888888776432 368999999872 1 122222 1111112 478878888886432 2
Q ss_pred CceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeec-CCCeEEEeeec
Q psy2521 394 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LDLGQITHISG 471 (783)
Q Consensus 394 ~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-~~~g~v~~~s~ 471 (783)
..+|+++++++.. .+.++... -..-.++.+. +++.||+..... .+|+++++ +|...+.+. ...+.-.++..
T Consensus 181 ~~~I~r~~~dG~~---~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~--~~I~~~~~-dG~~~~~~~~~~~~~P~giav 253 (349)
T 3v64_C 181 TPRIEASSMDGSG---RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANL-DGSHRKAVISQGLPHPFAITV 253 (349)
T ss_dssp SCEEEEEETTSCS---CEESCCSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEET-TSCSCEEEECSSCSSEEEEEE
T ss_pred CCEEEEEeCCCCC---cEEEEECC-CCCcceEEEeCCCCEEEEEECCC--CEEEEEeC-CCCceEEEEeCCCCCceEEEE
Confidence 3689999998754 34444433 2333455554 457888875543 58999999 565433332 22222223333
Q ss_pred cccccEEEEEEecCCCCceEEEEeC
Q psy2521 472 RRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 472 ~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++.+|++- +. -.+|.++|.
T Consensus 254 --~~~~ly~td--~~-~~~V~~~~~ 273 (349)
T 3v64_C 254 --FEDSLYWTD--WH-TKSINSANK 273 (349)
T ss_dssp --ETTEEEEEE--TT-TTEEEEEET
T ss_pred --ECCEEEEec--CC-CCeEEEEEc
Confidence 234565542 22 246777774
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0016 Score=78.76 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=40.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-c-----------ccccccCeeEEeeCCCEEEEEE
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-V-----------LKNVKFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~-----------~~~~~~~~~~WspDg~~l~y~~ 273 (783)
+..+++||||+.||-+.. ..+|++||+.+|..... . ........++|||||+.|+...
T Consensus 438 v~sv~~spdg~~laSgs~-----DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs 507 (902)
T 2oaj_A 438 KRQKLPAEYGTAFITGHS-----NGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSI 507 (902)
T ss_dssp CCCCCCCSEEEEEEEEET-----TSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEE
T ss_pred CCcccccccCcEEEEecC-----CCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEe
Confidence 445678999998885442 25799999999864211 0 1112236899999999888766
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=0.01 Score=62.19 Aligned_cols=217 Identities=10% Similarity=0.022 Sum_probs=120.7
Q ss_pred EEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC--CCceeEEecC
Q psy2521 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVEFP 313 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~--~~d~~v~~~~ 313 (783)
.|+.+|+++++............++.|.++++.||++.. ...+|++.++.+.. .....+....
T Consensus 11 ~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~---------------~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---------------SQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET---------------TTTEEEEEEC--------CEEEECSS
T ss_pred eEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC---------------CCCcEEEEECCCCCCCcccEEEEeCC
Confidence 489999998765432212222358999998889988872 23478888876511 1112233211
Q ss_pred -CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECC
Q psy2521 314 -NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 314 -~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
..+ .++++++.++.|++... ....|.++++++.. ...+.. ....-.. .++|+++.||+....
T Consensus 76 ~~~p---~glavd~~~~~ly~~d~---~~~~I~~~~~~g~~---------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 76 IQAP---DGLAVDWIHSNIYWTDS---VLGTVSVADTKGVK---------RKTLFRENGSKPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSSS---------EEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CCCc---CEEEEeecCCeEEEEEC---CCCEEEEEeCCCCc---------eEEEEECCCCCcceEEeCCCCCEEEEEccC
Confidence 222 36778888888876543 23689999987620 122332 1111112 477878888875432
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeec-CC--CeEE
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LD--LGQI 466 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-~~--~g~v 466 (783)
...+|+++++++.. .+.++... -..-.++.+. +++.||+..... .+|+++|+ +|+..+.+. .+ ....
T Consensus 141 --~~~~I~~~~~dG~~---~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~--~~I~~~d~-dg~~~~~~~~~~~~~~~P 211 (316)
T 1ijq_A 141 --TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDV-NGGNRKTILEDEKRLAHP 211 (316)
T ss_dssp --SSCEEEEEETTSCC---EEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEET-TSCSCEEEEECTTTTSSE
T ss_pred --CCCeEEEEcCCCCC---eEEEEECC-CCCceEEEEeccCCEEEEEECCC--CeEEEEec-CCCceEEEeecCCccCCc
Confidence 23689999997644 23344332 2333455554 457888876543 58999999 565444432 11 1112
Q ss_pred EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 467 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 467 ~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++.. +++.+|++- + .-.+|+++|.
T Consensus 212 ~giav--~~~~ly~~d--~-~~~~V~~~~~ 236 (316)
T 1ijq_A 212 FSLAV--FEDKVFWTD--I-INEAIFSANR 236 (316)
T ss_dssp EEEEE--ETTEEEEEE--T-TTTEEEEEET
T ss_pred EEEEE--ECCEEEEEE--C-CCCeEEEEeC
Confidence 23333 235566543 2 2357888886
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.0019 Score=65.66 Aligned_cols=195 Identities=11% Similarity=0.107 Sum_probs=118.7
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.++.|+||| .||.+... .....|...++.+..... ....+..+ +. ..++.+|+.|+....
T Consensus 24 ~Gl~~~~dg-~Lyvstg~-------------~~~s~v~~iD~~tg~v~~--~i~l~~~~-fg--eGi~~~g~~lyv~t~- 83 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGL-------------YGRSSVRQVALQTGKVEN--IHKMDDSY-FG--EGLTLLNEKLYQVVW- 83 (266)
T ss_dssp EEEEECSTT-EEEEEECS-------------TTTCEEEEEETTTCCEEE--EEECCTTC-CE--EEEEEETTEEEEEET-
T ss_pred ccEEEeCCC-eEEEECCC-------------CCCCEEEEEECCCCCEEE--EEecCCCc-ce--EEEEEeCCEEEEEEe-
Confidence 488999885 66655511 124578888887764221 11122222 22 345556777766543
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 417 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~ 417 (783)
..+.++++|.+++. . ...+..+...++ .+++||+++|+ ++ + ..+|..+|.++.+ ...-++-+
T Consensus 84 --~~~~v~viD~~t~~--v------~~~i~~g~~~g~-glt~Dg~~l~v-s~-g--s~~l~viD~~t~~---v~~~I~Vg 145 (266)
T 2iwa_A 84 --LKNIGFIYDRRTLS--N------IKNFTHQMKDGW-GLATDGKILYG-SD-G--TSILYEIDPHTFK---LIKKHNVK 145 (266)
T ss_dssp --TCSEEEEEETTTTE--E------EEEEECCSSSCC-EEEECSSSEEE-EC-S--SSEEEEECTTTCC---EEEEEECE
T ss_pred --cCCEEEEEECCCCc--E------EEEEECCCCCeE-EEEECCCEEEE-EC-C--CCeEEEEECCCCc---EEEEEEEC
Confidence 33789999998731 0 112212212233 37889999885 55 2 3479999987754 22222211
Q ss_pred -CCc---eEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-C------------eEEEeeeccccccEEEE
Q psy2521 418 -ENR---TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-L------------GQITHISGRRKYNEVFY 480 (783)
Q Consensus 418 -~~~---~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~------------g~v~~~s~~~d~~~l~~ 480 (783)
... .+..+.+.+ +.+|+.... ...|.++|+++|+.+..|+++ . ....++..+++++.+|+
T Consensus 146 ~~~~p~~~~nele~~d-g~lyvn~~~--~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 146 YNGHRVIRLNELEYIN-GEVWANIWQ--TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp ETTEECCCEEEEEEET-TEEEEEETT--SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred CCCcccccceeEEEEC-CEEEEecCC--CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 111 234445554 677766543 358999999999988888763 1 23467788899999998
Q ss_pred EEecCCCCceEEEEeC
Q psy2521 481 GFTSFLQPGTIYHCNI 496 (783)
Q Consensus 481 ~~ss~~~P~~vy~~d~ 496 (783)
+-..+ +.+|.+++
T Consensus 223 Tgk~~---~~v~~i~l 235 (266)
T 2iwa_A 223 TGKLW---PKLFEIKL 235 (266)
T ss_dssp EETTC---SEEEEEEE
T ss_pred ECCCC---CeEEEEEE
Confidence 87766 47888888
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0036 Score=66.12 Aligned_cols=115 Identities=12% Similarity=0.108 Sum_probs=76.4
Q ss_pred EEeeEEECC--CCcEEEEEEecCCCceEEEEEEECCCCcccccc--ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV--LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SP--DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~--~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..++++| +|++++-+.. + ..|++||+.+++.+... ........++|+|||+.|+....
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~-d----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~----------- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADN-R----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP----------- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEET-T----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-----------
T ss_pred CEEEEEcCCCCCCCEEEEEeC-C----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-----------
Confidence 377899999 9999876543 2 45999999999864322 11223468899999987765441
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...|.++++.+.... ...+... +......+.|+|||++|+... . ..|.++|+.++
T Consensus 191 -----dg~i~iwd~~~~~~~-~~~~~~~-h~~~v~~l~fs~~g~~l~s~~-~----~~v~iwd~~~~ 245 (343)
T 3lrv_A 191 -----DGILDVYNLSSPDQA-SSRFPVD-EEAKIKEVKFADNGYWMVVEC-D----QTVVCFDLRKD 245 (343)
T ss_dssp -----TSCEEEEESSCTTSC-CEECCCC-TTSCEEEEEECTTSSEEEEEE-S----SBEEEEETTSS
T ss_pred -----CCEEEEEECCCCCCC-ccEEecc-CCCCEEEEEEeCCCCEEEEEe-C----CeEEEEEcCCC
Confidence 236888888765322 0223321 123456899999999988654 2 27999999874
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.0069 Score=61.13 Aligned_cols=235 Identities=9% Similarity=0.082 Sum_probs=121.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
...+++++|||+ |.++.+.. ...|+++|..++......... ....++++++||+ ||++..
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~-------------- 85 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGM---YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF-------------- 85 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSS---SCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET--------------
T ss_pred CccceEECCCCC-EEEEccCC---CCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC--------------
Confidence 356789999998 33314322 246888988766533221111 2335789999987 665551
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...|++++..+... ..+.... .....++.+++||+ |++... ....|++++..+.. . ......
T Consensus 86 --~~~i~~~d~~~~~~---~~~~~~~-~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~~~~--~------~~~~~~ 147 (270)
T 1rwi_B 86 --NNRVVTLAAGSNNQ---TVLPFDG-LNYPEGLAVDTQGA-VYVADR---GNNRVVKLAAGSKT--Q------TVLPFT 147 (270)
T ss_dssp --TTEEEEECTTCSCC---EECCCCS-CSSEEEEEECTTCC-EEEEEG---GGTEEEEECTTCCS--C------EECCCC
T ss_pred --CCEEEEEeCCCceE---eeeecCC-cCCCcceEECCCCC-EEEEEC---CCCEEEEEECCCce--e------Eeeccc
Confidence 23677777654321 1111111 11235788899998 443322 23578888765420 0 000011
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
+...-. -.++++|+ +|+.... +..|++++.++.. ..............+.+..++.|++....+ ..|++
T Consensus 148 ~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~~~~----~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~--~~v~~ 217 (270)
T 1rwi_B 148 GLNDPDGVAVDNSGN-VYVTDTD---NNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHNT--NQVVK 217 (270)
T ss_dssp SCCSCCCEEECTTCC-EEEEEGG---GTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETTT--SCEEE
T ss_pred cCCCceeEEEeCCCC-EEEEECC---CCEEEEEecCCCc----eEeecccCCCCceEEEECCCCCEEEEECCC--CcEEE
Confidence 111111 14777775 7765432 3579999987643 122222211233455555445777765543 46889
Q ss_pred EECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++ +|+....+... .....++..++++. ++++-..- .+|..+++
T Consensus 218 ~~~-~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~---~~v~~~~~ 262 (270)
T 1rwi_B 218 LLA-GSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN---DRVVKLTS 262 (270)
T ss_dssp ECT-TCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG---TEEEEECC
T ss_pred EcC-CCCcceeeccCCCCCceeEEECCCCC-EEEEECCC---CEEEEEcC
Confidence 998 45443333322 22345666667664 66554332 36777776
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0019 Score=70.64 Aligned_cols=208 Identities=10% Similarity=0.050 Sum_probs=114.0
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECC---CCccccccc-------------cccccCeeE--EeeCCCEEEE
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD---TGKDYPEVL-------------KNVKFPSIS--WTHDHKGFFY 271 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~---tg~~~~~~~-------------~~~~~~~~~--WspDg~~l~y 271 (783)
.+..++|+|||++|+.+... ..|++||++ +|+...... .......+. |+||++.|+.
T Consensus 113 ~v~~~~~~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKD-----GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCC-----CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE
Confidence 47889999999998866432 469999984 454322110 000111222 5677776665
Q ss_pred EEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 272 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 272 ~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
... ...|+++++.+.. ....+..+........+.|+|||++|+....+ ..|.++|+.+
T Consensus 188 ~~~----------------d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd~~~ 245 (437)
T 3gre_A 188 LTN----------------LSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTR----GIIDIWDIRF 245 (437)
T ss_dssp EET----------------TSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETT----SCEEEEETTT
T ss_pred EeC----------------CCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCC----CeEEEEEcCC
Confidence 552 2368888987643 23334432122345688999999998865432 5799999987
Q ss_pred CCCCcccCCCCceeeecCccceeE--EEE----eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC--------
Q psy2521 352 LPDGKISGKFPLKTVIPGMDHHHE--IIA----NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-------- 417 (783)
Q Consensus 352 g~~~~l~~~~~~~~l~~~~~~~~~--~~s----~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-------- 417 (783)
+. ....+......... .|+ +++..|+ .... .+.|..+|+.++.. ...+..+.
T Consensus 246 ~~--------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~-s~~~---dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 246 NV--------LIRSWSFGDHAPITHVEVCQFYGKNSVIVV-GGSS---KTFLTIWNFVKGHC--QYAFINSDEQPSMEHF 311 (437)
T ss_dssp TE--------EEEEEBCTTCEEEEEEEECTTTCTTEEEEE-EEST---TEEEEEEETTTTEE--EEEEESSSSCCCGGGG
T ss_pred cc--------EEEEEecCCCCceEEEEeccccCCCccEEE-EEcC---CCcEEEEEcCCCcE--EEEEEcCCCCCcccee
Confidence 31 11111111111111 233 3443333 3332 34688888865431 12222111
Q ss_pred ----------------CCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC
Q psy2521 418 ----------------ENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 461 (783)
Q Consensus 418 ----------------~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~ 461 (783)
....+..+.+.+ +.++++...++ .|++||+.+++....+..
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 312 LPIEKGLEELNFCGIRSLNALSTISVSN-DKILLTDEATS--SIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp SCBCSSGGGCCCCCCCSGGGGCCEEEET-TEEEEEEGGGT--EEEEEETTCGGGCEEEEC
T ss_pred cccccccccceecccccCCceEEEEECC-ceEEEecCCCC--eEEEEECCCcccceEEec
Confidence 011123344444 67777777665 799999988876665654
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=97.78 E-value=0.014 Score=60.61 Aligned_cols=236 Identities=10% Similarity=0.021 Sum_probs=118.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..+++|+|||+ +|..+..+ ..|+.+|.+++........ ....++++++||+ ||++... ..
T Consensus 34 pegia~~~~g~--lyv~d~~~---~~I~~~d~~g~~~~~~~~~-~~p~gia~~~dG~-l~vad~~-------------~~ 93 (306)
T 2p4o_A 34 LENLASAPDGT--IFVTNHEV---GEIVSITPDGNQQIHATVE-GKVSGLAFTSNGD-LVATGWN-------------AD 93 (306)
T ss_dssp EEEEEECTTSC--EEEEETTT---TEEEEECTTCCEEEEEECS-SEEEEEEECTTSC-EEEEEEC-------------TT
T ss_pred cceEEECCCCC--EEEEeCCC---CeEEEECCCCceEEEEeCC-CCceeEEEcCCCc-EEEEecc-------------CC
Confidence 45789999998 44455332 3589999876532221222 2335789999997 6554421 11
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCccc---CCCCceeee
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKIS---GKFPLKTVI 367 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~---~~~~~~~l~ 367 (783)
..+|++.+..++. -..+...+.. .+..++...+++ .+++.. . ....||.+|..++. ..+. .........
T Consensus 94 ~~~v~~~d~~~g~--~~~~~~~~~~-~~~~g~~~~~~~-~~~v~d-~--~~g~i~~~d~~~~~-~~v~~~~~~~~~~~~~ 165 (306)
T 2p4o_A 94 SIPVVSLVKSDGT--VETLLTLPDA-IFLNGITPLSDT-QYLTAD-S--YRGAIWLIDVVQPS-GSIWLEHPMLARSNSE 165 (306)
T ss_dssp SCEEEEEECTTSC--EEEEEECTTC-SCEEEEEESSSS-EEEEEE-T--TTTEEEEEETTTTE-EEEEEECGGGSCSSTT
T ss_pred cceEEEEcCCCCe--EEEEEeCCCc-cccCcccccCCC-cEEEEE-C--CCCeEEEEeCCCCc-EeEEEECCcccccccc
Confidence 2256666554432 2233333322 233445545544 444332 2 23689999986521 0000 000000000
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC-CCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN-PCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~-~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
....... -+++||+.||+... .+.+|++++++. +.....+.+. .. .....+.+..++.|++....+ .+|.
T Consensus 166 ~~~~~pn-gis~dg~~lyv~d~---~~~~I~~~~~~~~g~~~~~~~~~-~~--~~P~gi~vd~dG~l~va~~~~--~~V~ 236 (306)
T 2p4o_A 166 SVFPAAN-GLKRFGNFLYVSNT---EKMLLLRIPVDSTDKPGEPEIFV-EQ--TNIDDFAFDVEGNLYGATHIY--NSVV 236 (306)
T ss_dssp CCSCSEE-EEEEETTEEEEEET---TTTEEEEEEBCTTSCBCCCEEEE-ES--CCCSSEEEBTTCCEEEECBTT--CCEE
T ss_pred CCCCcCC-CcCcCCCEEEEEeC---CCCEEEEEEeCCCCCCCccEEEe-cc--CCCCCeEECCCCCEEEEeCCC--CeEE
Confidence 1111111 24899998887543 245799999874 2211222222 11 112234444445676655433 5689
Q ss_pred EEECCCCceee--eecCCCeEEEeeecc---ccccEEEEEEec
Q psy2521 447 LHDLNTGKRLH--SFPLDLGQITHISGR---RKYNEVFYGFTS 484 (783)
Q Consensus 447 ~~dl~~G~~~~--~l~~~~g~v~~~s~~---~d~~~l~~~~ss 484 (783)
+++. +|+... .+..+.....++... ++++.+|++-..
T Consensus 237 ~~~~-~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 237 RIAP-DRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EECT-TCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EECC-CCCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 9998 587522 344431223344444 677888887654
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.016 Score=63.33 Aligned_cols=226 Identities=13% Similarity=0.147 Sum_probs=126.5
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
.++++||++|+.+... ..|+++|+.+++...... .......++| |++.|+.... ..
T Consensus 137 ~~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~----------------dg 193 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS----------------DS 193 (435)
T ss_dssp EEEECCSSEEEEEESS-----SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET----------------TS
T ss_pred EEEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC----------------CC
Confidence 3566799998876542 459999999987654221 1112234555 7776665552 23
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~ 372 (783)
.|.++++.+.. ....+... ......+.++ +..++.... ...|.++|+.++. .........+...
T Consensus 194 ~i~vwd~~~~~--~~~~~~~h--~~~v~~l~~~--~~~l~s~s~----dg~i~vwd~~~~~------~~~~~~~~~~~~~ 257 (435)
T 1p22_A 194 TVRVWDVNTGE--MLNTLIHH--CEAVLHLRFN--NGMMVTCSK----DRSIAVWDMASPT------DITLRRVLVGHRA 257 (435)
T ss_dssp CEEEEESSSCC--EEEEECCC--CSCEEEEECC--TTEEEEEET----TSCEEEEECSSSS------CCEEEEEECCCSS
T ss_pred eEEEEECCCCc--EEEEEcCC--CCcEEEEEEc--CCEEEEeeC----CCcEEEEeCCCCC------CceeeeEecCCCC
Confidence 57888887653 22222222 2234456665 455554322 2578999998731 1111122333333
Q ss_pred eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCC
Q psy2521 373 HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT 452 (783)
Q Consensus 373 ~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~ 452 (783)
....+..+++.|+..+. .+.|..+|+.++. ....+-.+. ..+..+.+ + +.++++...++ .|.+||+.+
T Consensus 258 ~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~--~~~~~~~~~--~~v~~~~~-~-~~~l~~g~~dg--~i~iwd~~~ 325 (435)
T 1p22_A 258 AVNVVDFDDKYIVSASG----DRTIKVWNTSTCE--FVRTLNGHK--RGIACLQY-R-DRLVVSGSSDN--TIRLWDIEC 325 (435)
T ss_dssp CEEEEEEETTEEEEEET----TSEEEEEETTTCC--EEEEEECCS--SCEEEEEE-E-TTEEEEEETTS--CEEEEETTT
T ss_pred cEEEEEeCCCEEEEEeC----CCeEEEEECCcCc--EEEEEcCCC--CcEEEEEe-C-CCEEEEEeCCC--eEEEEECCC
Confidence 33345558887776544 3468889987754 122332222 23334444 4 34455555554 689999988
Q ss_pred CceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 453 GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 453 G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+.+..+....+.+..+.. ++..++ +.+. -..+..+|+
T Consensus 326 ~~~~~~~~~h~~~v~~~~~--~~~~l~-sg~~---dg~i~vwd~ 363 (435)
T 1p22_A 326 GACLRVLEGHEELVRCIRF--DNKRIV-SGAY---DGKIKVWDL 363 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEE-EEET---TSCEEEEEH
T ss_pred CCEEEEEeCCcCcEEEEEe--cCCEEE-EEeC---CCcEEEEEC
Confidence 8887777765555666655 444443 3322 256888887
|
| >2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A | Back alignment and structure |
|---|
Probab=97.76 E-value=5.4e-05 Score=79.91 Aligned_cols=102 Identities=13% Similarity=0.040 Sum_probs=59.5
Q ss_pred EEEEecC--CCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 557 VIIYGYG--GYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 557 ~ll~~hG--g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+++|| +.+.. ..|.. ....|. .++.|+.+|.||.|.-..+. .......++++.+.+..++..- ...
T Consensus 91 ~l~~~hg~g~~~~~--~~~~~-l~~~L~-~~~~v~~~d~~G~g~~~~~~-----~~~~~~~~~~~a~~~~~~i~~~-~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGGP--HEFLR-LSTSFQ-EERDFLAVPLPGYGTGTGTG-----TALLPADLDTALDAQARAILRA-AGD 160 (319)
T ss_dssp EEEEECCCCTTCST--TTTHH-HHHTTT-TTCCEEEECCTTCCBC---C-----BCCEESSHHHHHHHHHHHHHHH-HTT
T ss_pred cEEEeCCCCCCCcH--HHHHH-HHHhcC-CCCceEEecCCCCCCCcccc-----cCCCCCCHHHHHHHHHHHHHHh-cCC
Confidence 8999998 33332 23443 345565 58999999999954310000 0111233444443322222210 122
Q ss_pred CcEEEEEeChhHHHHHHHHhcC----CCceeEEEEcCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQR----PELYGAALILVG 668 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~----p~lf~a~i~~~~ 668 (783)
.++.++|+|+||.++..++.+. ++..+.++...+
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~ 198 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDP 198 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCC
Confidence 5799999999999999998775 345677776654
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.037 Score=57.81 Aligned_cols=205 Identities=9% Similarity=0.068 Sum_probs=118.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCC---Cccccccc-cc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT---GKDYPEVL-KN-VKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t---g~~~~~~~-~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..++.|++++++|.|+- ..+ ..|+.+++++ +......+ .. ....++++.+.++.||++..
T Consensus 32 p~g~~~d~~~~~ly~~D-~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~----------- 96 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSD-LSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 96 (316)
T ss_dssp EEEEEEETTTTEEEEEE-TTT---TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----------
T ss_pred eEEEEEEeCCCEEEEEE-CCC---CcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEEC-----------
Confidence 45788999888876654 322 4699999887 22211111 11 12357888777888887762
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
....|.+.++.... ...+.. .... -.++++.|++++|++.... ....|+.+++++. . ..
T Consensus 97 ----~~~~I~~~~~~g~~--~~~~~~~~~~~---P~~iavdp~~g~ly~~d~~--~~~~I~~~~~dG~-~--------~~ 156 (316)
T 1ijq_A 97 ----VLGTVSVADTKGVK--RKTLFRENGSK---PRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV-D--------IY 156 (316)
T ss_dssp ----TTTEEEEEETTSSS--EEEEEECTTCC---EEEEEEETTTTEEEEEECS--SSCEEEEEETTSC-C--------EE
T ss_pred ----CCCEEEEEeCCCCc--eEEEEECCCCC---cceEEeCCCCCEEEEEccC--CCCeEEEEcCCCC-C--------eE
Confidence 13467777775432 222333 2222 2578899999988876432 2368999998762 1 11
Q ss_pred eeecC-ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-CCceEEEEEEeeCCEEEEEEecCC
Q psy2521 365 TVIPG-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-ENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 365 ~l~~~-~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
.+... ...-.. .+++++++||+.-. .+.+|.++++++.. .+.++... ....-.++.+. ++.||++...
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~-~~~ly~~d~~-- 227 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVF-EDKVFWTDII-- 227 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEE-TTEEEEEETT--
T ss_pred EEEECCCCCceEEEEeccCCEEEEEEC---CCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEE-CCEEEEEECC--
Confidence 22221 111111 48888999998643 35689999998644 34444321 11222355554 4788887643
Q ss_pred eeEEEEEECCCCceeeee
Q psy2521 442 RSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l 459 (783)
..+|.+++..+|+.++.|
T Consensus 228 ~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 228 NEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TTEEEEEETTTCCCCEEE
T ss_pred CCeEEEEeCCCCcceEEE
Confidence 357889987677754444
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0019 Score=69.61 Aligned_cols=201 Identities=12% Similarity=0.144 Sum_probs=111.1
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
..+.|+|||+.|+-... ...|.+|++.+.. ....+.... .....+.|+|||++|+...
T Consensus 70 ~~~~~sp~~~~l~s~s~----------------D~~v~iWd~~~~~--~~~~~~~h~--~~v~~~~~s~~g~~las~~-- 127 (380)
T 3iz6_a 70 YSLDWTPEKNWIVSASQ----------------DGRLIVWNALTSQ--KTHAIKLHC--PWVMECAFAPNGQSVACGG-- 127 (380)
T ss_dssp EEEEECTTSSCEEEEET----------------TSEEEEEETTTTE--EEEEEECCC--TTCCCCEECTTSSEEEECC--
T ss_pred EEEEEcCCCCEEEEEeC----------------CCeEEEEECCCCc--cceEEecCC--CCEEEEEECCCCCEEEEee--
Confidence 57899999998775552 2368888886643 222233222 2345788999999987432
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~ 415 (783)
....+.++++.++... ....+....+.+...... .|.|+++..++.... ...|..+|+.++. ....+.
T Consensus 128 --~d~~v~iw~~~~~~~~--~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~---D~~i~~wd~~~~~---~~~~~~ 197 (380)
T 3iz6_a 128 --LDSACSIFNLSSQADR--DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG---DQTCVLWDVTTGQ---RISIFG 197 (380)
T ss_dssp --SSSCCEEEECCCCSSC--CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT---TSCEEEECTTTCC---EEEEEC
T ss_pred --CCCcEEEEECCCCccc--cCCccceeeccCCCcceEEEEEecCCCCEEEEECC---CCcEEEEEcCCCc---EEEEee
Confidence 2356777787652100 011112222222222221 366765544444443 3458888987754 122221
Q ss_pred ----CCCCceEEEEEE-eeCCEEEEEEecCCeeEEEEEECCC-CceeeeecCCCeEEEeeeccccccEEEEEEecCCCCc
Q psy2521 416 ----EDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNT-GKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPG 489 (783)
Q Consensus 416 ----~~~~~~l~~~~~-~~g~~l~~~~~~~g~~~l~~~dl~~-G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~ 489 (783)
......+..+.+ ..++.++++...++ .|.+||+.. ++.++.+....+.|..+.++|++..++ +.+ .-.
T Consensus 198 ~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s---~D~ 271 (380)
T 3iz6_a 198 SEFPSGHTADVLSLSINSLNANMFISGSCDT--TVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFG-TGS---DDG 271 (380)
T ss_dssp CCSSSSCCSCEEEEEECSSSCCEEEEEETTS--CEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEE-EEC---SSS
T ss_pred cccCCCCccCeEEEEeecCCCCEEEEEECCC--eEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEE-EEc---CCC
Confidence 111222333333 22356777777765 588899853 444555655556676777888876554 222 235
Q ss_pred eEEEEeC
Q psy2521 490 TIYHCNI 496 (783)
Q Consensus 490 ~vy~~d~ 496 (783)
++..+|+
T Consensus 272 ~i~lwd~ 278 (380)
T 3iz6_a 272 TCRLFDM 278 (380)
T ss_dssp CEEEEET
T ss_pred eEEEEEC
Confidence 7889999
|
| >2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus} | Back alignment and structure |
|---|
Probab=97.71 E-value=7.7e-05 Score=81.50 Aligned_cols=111 Identities=11% Similarity=0.060 Sum_probs=64.4
Q ss_pred CCccEEEEecCCCCCc-----c-CCcCcH---HHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc---------ccCCcC
Q psy2521 553 RRNPVIIYGYGGYGVS-----V-LPTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR---------LLKKQN 614 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~-----~-~~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~---------~~~~~~ 614 (783)
+..|.||++||..+.. . ...|.. .+...|.++||.|+++|++| +|..+..... ......
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~~~~l~~~i~~g~g~sg~~ 126 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHERAVELYYYLKGGRVDYGAA 126 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccchHHhhhhhhhcccccccc
Confidence 4556789999987642 1 233431 24456666799999999999 4544432110 000000
Q ss_pred -----hHHHHHHHHHHHHHcCCCC-CCcEEEEEeChhHHHHHHHHhc--------------------------CCCceeE
Q psy2521 615 -----CFDDFQAAAEYMINKKYTK-PKYITIMGGSNGGLLVGACLNQ--------------------------RPELYGA 662 (783)
Q Consensus 615 -----~~~D~~a~~~~l~~~~~~d-~~ri~i~G~S~GG~l~~~~~~~--------------------------~p~lf~a 662 (783)
.++++...+..+++. .. ..++.|+||||||+++..++.. +|+.++.
T Consensus 127 ~~~~~~~~~~a~dl~~ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~s 204 (431)
T 2hih_A 127 HSEKYGHERYGKTYEGVLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTS 204 (431)
T ss_dssp HHHHHTCCSEEEEECCSCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEE
T ss_pred ccccCCHHHHHHHHHHHHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeE
Confidence 000000000001111 12 2689999999999999988765 6888888
Q ss_pred EEEcCC
Q psy2521 663 ALILVG 668 (783)
Q Consensus 663 ~i~~~~ 668 (783)
+|+..+
T Consensus 205 lv~i~t 210 (431)
T 2hih_A 205 ITTIAT 210 (431)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 888765
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0097 Score=60.36 Aligned_cols=193 Identities=13% Similarity=0.010 Sum_probs=106.3
Q ss_pred EeeEEECCCCcEEEEEEe-cCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLS-KSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~-~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
-.++.++||| + +|..+ ..|+ ..|+++|+++|+.+....-+....+...+++|+.||.+. +
T Consensus 23 ~~Gl~~~~dg-~-Lyvstg~~~~--s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t---------------~ 83 (266)
T 2iwa_A 23 TQGLVYAEND-T-LFESTGLYGR--SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV---------------W 83 (266)
T ss_dssp EEEEEECSTT-E-EEEEECSTTT--CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE---------------T
T ss_pred cccEEEeCCC-e-EEEECCCCCC--CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE---------------e
Confidence 3578899997 4 44443 2222 579999999999765432111212334555678888776 2
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
....++.++..+.... .-+... .+ .+..+++||++++++ + + .+.|+++|.++.. ....+.-+
T Consensus 84 ~~~~v~viD~~t~~v~--~~i~~g-~~---~g~glt~Dg~~l~vs-~-g--s~~l~viD~~t~~--------v~~~I~Vg 145 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNI--KNFTHQ-MK---DGWGLATDGKILYGS-D-G--TSILYEIDPHTFK--------LIKKHNVK 145 (266)
T ss_dssp TCSEEEEEETTTTEEE--EEEECC-SS---SCCEEEECSSSEEEE-C-S--SSEEEEECTTTCC--------EEEEEECE
T ss_pred cCCEEEEEECCCCcEE--EEEECC-CC---CeEEEEECCCEEEEE-C-C--CCeEEEEECCCCc--------EEEEEEEC
Confidence 3457888887654221 112111 01 123578899998764 2 2 4799999998731 01112111
Q ss_pred c---cc--eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC------------CCCceEEEEEEee-C
Q psy2521 370 M---DH--HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE------------DENRTLDVVAAVA-N 430 (783)
Q Consensus 370 ~---~~--~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~------------~~~~~l~~~~~~~-g 430 (783)
. .. -.. .+. + +++|..... ...|.++|+++++ ....++- ....++.++.+.. +
T Consensus 146 ~~~~p~~~~nele~~-d-g~lyvn~~~---~~~V~vID~~tg~---V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 146 YNGHRVIRLNELEYI-N-GEVWANIWQ---TDCIARISAKDGT---LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp ETTEECCCEEEEEEE-T-TEEEEEETT---SSEEEEEETTTCC---EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred CCCcccccceeEEEE-C-CEEEEecCC---CCeEEEEECCCCc---EEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 1 10 011 243 4 477754322 2479999998876 2222321 1124566776654 3
Q ss_pred CEEEEEEecCCeeEEEEEEC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl 450 (783)
+.++++.... ++|+++++
T Consensus 218 ~~lfVTgk~~--~~v~~i~l 235 (266)
T 2iwa_A 218 KRIFVTGKLW--PKLFEIKL 235 (266)
T ss_dssp TEEEEEETTC--SEEEEEEE
T ss_pred CEEEEECCCC--CeEEEEEE
Confidence 5666655433 56777776
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.70 E-value=0.032 Score=60.46 Aligned_cols=206 Identities=7% Similarity=0.050 Sum_probs=119.1
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc----ccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~----~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..+++|++.+..|.|+ +..+ ..|+.++++++. ......... ...+++..+.++.||++..
T Consensus 114 ~~~l~~d~~~~~lyws-D~~~---~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~----------- 178 (400)
T 3p5b_L 114 VVALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 178 (400)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEET-----------
T ss_pred ceEEeeeeccCceEEE-ecCC---CeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEEC-----------
Confidence 5678999988877665 4322 358888987632 111111111 2246777666778887762
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
....|.+.++.... ...+.. ....| .++++.|.+.+|+++... ....|+.+++++.. ..
T Consensus 179 ----~~~~I~~~~~~g~~--~~~l~~~~~~~P---~~iavdp~~g~ly~td~~--~~~~I~~~~~dG~~---------~~ 238 (400)
T 3p5b_L 179 ----VLGTVSVADTKGVK--RKTLFRENGSKP---RAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVD---------IY 238 (400)
T ss_dssp ----TTTEEEEECTTTCS--EEEEEECSSCCE---EEEEEETTTTEEEEEECS--SSCCEEEEETTSCS---------CE
T ss_pred ----CCCeEEEEeCCCCc--eEEEEeCCCCCc---ceEEEecccCeEEEEeCC--CCCEEEEEeCCCCc---------cE
Confidence 13468777776432 223333 22223 578899999998876532 23689999998721 12
Q ss_pred eeecC-ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCC
Q psy2521 365 TVIPG-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 365 ~l~~~-~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
.++.. ...-.. .+++++++||+.-. .+.+|.++++++.. .+.++.... ...-.++.+.+ +.||++...
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~-- 309 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII-- 309 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCC---CEEEEECSSTTSSEEEEEEET-TEEEEEESS--
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCCc---cEEEEeCCCCCCCCEEEEEeC-CEEEEecCC--
Confidence 23221 111111 48888999998632 35689999998754 344544321 11223455544 788887643
Q ss_pred eeEEEEEECCCCceeeeec
Q psy2521 442 RSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~ 460 (783)
...|++++..+|+.+..|.
T Consensus 310 ~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 310 NEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp SCSEEEEESSSCCCCEEEE
T ss_pred CCeEEEEEcCCCCceEEEe
Confidence 3568889866787655554
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0062 Score=64.26 Aligned_cols=238 Identities=9% Similarity=-0.009 Sum_probs=118.1
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
..+++|+++|+-+.. ...|++||+.+|+.+.... ......+.|+|+ + .+...+. ...-......
T Consensus 42 ~~~~~d~~~l~sg~~-----Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~---~-~s~s~D~------~i~~w~~~~~ 105 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCE-----DGALHFTQLKDSKTITTIT-TPNPRTGGEHPA---I-ISRGPCN------RLLLLYPGNQ 105 (343)
T ss_dssp SSSSEEEEEEEEEEE-----TTEEEEEEESSSSCEEEEE-EECCCTTCCCCS---E-EEECSTT------EEEEEETTTE
T ss_pred hhhcCCCCEEEEECC-----CCcEEEEECCCCcEEEEEe-cCCceeeeeCCc---e-EEecCCC------eEEEEEccCc
Confidence 346678888776543 2479999999987643211 111235566666 2 2221110 0000001112
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEec--CCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-cCc
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD--CGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGM 370 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp--DGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~-~~~ 370 (783)
+..+++.+.. -...+.... ......+.++| +|++++.... ...|.++|+.++. ..... ...
T Consensus 106 ~~~~~~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~----dg~i~~wd~~~~~---------~~~~~~~~~ 169 (343)
T 3lrv_A 106 ITILDSKTNK--VLREIEVDS-ANEIIYMYGHNEVNTEYFIWADN----RGTIGFQSYEDDS---------QYIVHSAKS 169 (343)
T ss_dssp EEEEETTTCC--EEEEEECCC-SSCEEEEECCC---CCEEEEEET----TCCEEEEESSSSC---------EEEEECCCS
T ss_pred eEEeecCCcc--eeEEeecCC-CCCEEEEEcCCCCCCCEEEEEeC----CCcEEEEECCCCc---------EEEEEecCC
Confidence 3333443321 111122111 12346788999 9999875432 2578999998742 11111 111
Q ss_pred ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCc-EEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 371 DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW-KTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 371 ~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~-~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
.... . .|+|+|..|+.-+ . .+.|..+|+.++.. . ..+.... ...+..+.+..++.+++... ++ .|.+
T Consensus 170 ~~~i~~~~~~pdg~~lasg~-~---dg~i~iwd~~~~~~--~~~~~~~~h-~~~v~~l~fs~~g~~l~s~~-~~--~v~i 239 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYS-P---DGILDVYNLSSPDQ--ASSRFPVDE-EAKIKEVKFADNGYWMVVEC-DQ--TVVC 239 (343)
T ss_dssp SCCCCEEEECTTSCEEEEEC-T---TSCEEEEESSCTTS--CCEECCCCT-TSCEEEEEECTTSSEEEEEE-SS--BEEE
T ss_pred CCceEEEEECCCCCEEEEEc-C---CCEEEEEECCCCCC--CccEEeccC-CCCEEEEEEeCCCCEEEEEe-CC--eEEE
Confidence 1112 2 5899988666433 2 34688899887652 2 2332212 23444555444355555555 33 7999
Q ss_pred EECCCCceeeeecC---CCeEE--EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 448 HDLNTGKRLHSFPL---DLGQI--THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 448 ~dl~~G~~~~~l~~---~~g~v--~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
||+.+++....+.. ....+ ..+.+++++..++....+- ..+..|++
T Consensus 240 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d---~~i~v~~~ 290 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES---NSLTIYKF 290 (343)
T ss_dssp EETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT---TEEEEEEE
T ss_pred EEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC---CcEEEEEE
Confidence 99977765444432 11222 2366778877665432212 24556665
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0077 Score=62.13 Aligned_cols=202 Identities=10% Similarity=0.118 Sum_probs=103.7
Q ss_pred EEeeEEECCC--CcEEEEEEecCCCceEEEEEEECCCCccccc-cc--cccccCeeEEeeC--CCEEEEEEeecCCCCCC
Q psy2521 210 ALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VL--KNVKFPSISWTHD--HKGFFYNQYCDINGTAD 282 (783)
Q Consensus 210 ~l~~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~--~~~~~~~~~WspD--g~~l~y~~~~~~~~~~~ 282 (783)
.+..++|||+ |++||-+.. ..+|++||+++++.... +. .......++|+|+ |+.|+-...
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~-----D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-------- 121 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSY-----DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-------- 121 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEET-----TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET--------
T ss_pred CeEEEEecCCCcCCEEEEEcC-----CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC--------
Confidence 4778899874 888775542 25799999998853221 11 1222357999998 666665442
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC-------------CcEEEEEEecCCCCcEEEEEEC
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC-------------GRYLLVSTSNNTQGSDLHYFDL 349 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD-------------Gk~l~~~~~~~~~~~~l~~~dl 349 (783)
...|.++++.+.......++.... .....+.|+|+ +++|+.... ...|.++|+
T Consensus 122 --------d~~v~~wd~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~----D~~v~lwd~ 187 (297)
T 2pm7_B 122 --------DGKVSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKY 187 (297)
T ss_dssp --------TSEEEEEEBCSSSCBCCEEEECCS--SCEEEEEECCCC------------CCEEEEEET----TSCEEEEEE
T ss_pred --------CCcEEEEEecCCCceeeeeeeccc--CccceEeecCCcccccccCCCCCCcceEEEEcC----CCcEEEEEE
Confidence 236777887654322223333222 23457889997 456654322 246788887
Q ss_pred CCCCCCcccCCCCceeeecCcccee-E-EEEeeC--CEEEEEECCCCCCceEEEEcCCCCCCCCcE-Eeec-CCCCceEE
Q psy2521 350 HSLPDGKISGKFPLKTVIPGMDHHH-E-IIANNG--PELIVKTTKNAPKGKVVTINLNNPCEKNWK-TLIP-EDENRTLD 423 (783)
Q Consensus 350 ~~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg--~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~-~li~-~~~~~~l~ 423 (783)
.++.. . ......+.+..... . .|+|++ ..++.....+ ..|..+|+..... .+. .++. ......+.
T Consensus 188 ~~~~~-~----~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D---~~v~iWd~~~~~~-~~~~~~~~~~~~~~~v~ 258 (297)
T 2pm7_B 188 NSDAQ-T----YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD---RTCIIWTQDNEQG-PWKKTLLKEEKFPDVLW 258 (297)
T ss_dssp ETTTT-E----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT---SCEEEEEESSTTS-CCEEEESSSSCCSSCEE
T ss_pred cCCCc-e----EEEEEEecCCCCceEEEEECCCCCCceEEEEEECC---CcEEEEEeCCCCC-ccceeeeecccCCCcEE
Confidence 65310 0 00111122222222 2 488986 3444433332 3466666654321 122 2331 11122333
Q ss_pred EE-EEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 424 VV-AAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 424 ~~-~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
.+ +.++ +.+++....++. |.+|+.
T Consensus 259 ~~~~s~~-g~~las~~~D~~--v~lw~~ 283 (297)
T 2pm7_B 259 RASWSLS-GNVLALSGGDNK--VTLWKE 283 (297)
T ss_dssp EEEECSS-SCCEEEEETTSC--EEEEEE
T ss_pred EEEECCC-CCEEEEEcCCCc--EEEEEE
Confidence 33 3444 555566666664 555554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.002 Score=70.87 Aligned_cols=118 Identities=12% Similarity=0.076 Sum_probs=73.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCC--------cccc--ccc--cccccCeeEEeeCCCEEEEEEeecC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTG--------KDYP--EVL--KNVKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg--------~~~~--~~~--~~~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
.+..++|||||++||..... |+....|+|||+.++ +.+. ... .......++|+|++..++.+...
T Consensus 94 ~v~~l~~spdg~~lav~~~s-gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~-- 170 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMS-SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA-- 170 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEE-TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--
T ss_pred cccEEEEcCCCCEEEEEEec-cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--
Confidence 37789999999999975422 444578999998765 1110 111 12234689999984444444321
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
...|+++++.+.. .+............+.|||||++|+....+ ..|.++|+.+
T Consensus 171 -------------Dg~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~lasgs~d----g~v~iwd~~~ 223 (434)
T 2oit_A 171 -------------DGSIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQLAVGKQN----GTVVQYLPTL 223 (434)
T ss_dssp -------------TSCEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSCEEEEETT----SCEEEECTTC
T ss_pred -------------CCeEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCEEEEEcCC----CcEEEEccCC
Confidence 2358888887642 122111112235688999999999865432 5788999873
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=97.69 E-value=0.015 Score=60.85 Aligned_cols=205 Identities=6% Similarity=0.008 Sum_probs=123.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..++.|.+.+..|.|+ +..+ ..|+.++++++...... ..+ ....++++.+.+..||++..
T Consensus 37 ~~~ld~d~~~~~lyw~-D~~~---~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~-------------- 98 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWS-DVSE---EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-------------- 98 (318)
T ss_dssp EEEEEEEGGGTEEEEE-ETTT---TEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEET--------------
T ss_pred cEEEEEEeCCCEEEEE-ECCC---CcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEEC--------------
Confidence 4467888887777655 4333 36899999887432111 111 12357888777888887762
Q ss_pred cCCceEEEEEcCCCCCCceeEEe-cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVE-FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~-~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....|.+.++.... ...+.. .... -.++++.|++.+|+++... ....|+.+++++. . ...++
T Consensus 99 -~~~~I~~~~~dG~~--~~~l~~~~~~~---P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~-~--------~~~~~ 161 (318)
T 3sov_A 99 -ETNRIEVSNLDGSL--RKVLFWQELDQ---PRAIALDPSSGFMYWTDWG--EVPKIERAGMDGS-S--------RFIII 161 (318)
T ss_dssp -TTTEEEEEETTSCS--CEEEECSSCSS---EEEEEEEGGGTEEEEEECS--SSCEEEEEETTSC-S--------CEEEE
T ss_pred -CCCEEEEEECCCCc--EEEEEeCCCCC---ccEEEEeCCCCEEEEEecC--CCCEEEEEEcCCC-C--------eEEEE
Confidence 13468888876532 223332 2222 2578899998888876432 2478999998762 1 12222
Q ss_pred c-CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 P-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~-~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
. +...-.. .+++++++||+.-. .+.+|+++++++.. .+.++... ...-.++.+. ++.+|++.. +...|
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~---~~~~I~~~d~dG~~---~~~~~~~~-~~~P~glav~-~~~lywtd~--~~~~V 231 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGTN---RQAVVKGS-LPHPFALTLF-EDILYWTDW--STHSI 231 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEECSC-CSCEEEEEEE-TTEEEEEET--TTTEE
T ss_pred ECCCCCccEEEEeccCCEEEEEEC---CCCEEEEEcCCCCc---eEEEecCC-CCCceEEEEe-CCEEEEEec--CCCeE
Confidence 2 1111112 58888999998643 45689999998754 34555433 2223345555 478888744 33578
Q ss_pred EEEECCCCceeeeec
Q psy2521 446 DLHDLNTGKRLHSFP 460 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~ 460 (783)
.+++..+|+..+.|.
T Consensus 232 ~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 232 LACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTTCCSCEEEE
T ss_pred EEEECCCCCceEEEe
Confidence 899987787655443
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.0015 Score=70.95 Aligned_cols=216 Identities=12% Similarity=0.106 Sum_probs=102.3
Q ss_pred eEEEEEeCCCC----CeEEEeCCCCcCCC-CcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-c--
Q psy2521 182 SILYVQRNLTG----STEVFLDPNKLSKD-GTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-K-- 253 (783)
Q Consensus 182 ~~l~~~~~~~g----~~~~llD~n~~~~~-g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~-- 253 (783)
..+|+.+.... ...-.++|.++.+. |...-..+..+|||=+|...-+..|.....|.++|.+|++.+..-. .
T Consensus 106 ~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~ 185 (462)
T 2ece_A 106 SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRG 185 (462)
T ss_dssp CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCT
T ss_pred CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCC
Confidence 56777764321 12223444444221 3223455789999922322333334445689999999998654221 1
Q ss_pred c-cccCeeEEeeCCCEEEEEEe-ecCCCCCCCCccc---ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEE--EEec
Q psy2521 254 N-VKFPSISWTHDHKGFFYNQY-CDINGTADGTETT---AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS--EVTD 326 (783)
Q Consensus 254 ~-~~~~~~~WspDg~~l~y~~~-~~~~~~~~g~~~~---~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~--~~Sp 326 (783)
. .....+.|+||++ ++|++. -.+...+.|.... .....+|.++++.+.. .+...........-..+ .++|
T Consensus 186 ~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~vg~~g~~P~~i~f~~~P 262 (462)
T 2ece_A 186 DQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTLGEENRMALELRPLHDP 262 (462)
T ss_dssp TCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEESCTTEEEEEEEEECSST
T ss_pred CccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEecCCCCCccceeEeeECC
Confidence 1 1123588999999 555552 1000000111000 0346789999997642 11122221111111233 4499
Q ss_pred CCcEEEEEEe--cCCCCcEEEEEECCCCCCCccc-CCCCcee-------ee------cCccceeEEEEeeCCEEEEEECC
Q psy2521 327 CGRYLLVSTS--NNTQGSDLHYFDLHSLPDGKIS-GKFPLKT-------VI------PGMDHHHEIIANNGPELIVKTTK 390 (783)
Q Consensus 327 DGk~l~~~~~--~~~~~~~l~~~dl~~g~~~~l~-~~~~~~~-------l~------~~~~~~~~~~s~dg~~l~~~t~~ 390 (783)
||+++++... .....+.|+++..++|.-.... .+.+..+ +. .....+. .+|+||+.||+ +|+
T Consensus 263 dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I-~lS~DGrfLYV-Snr 340 (462)
T 2ece_A 263 TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI-DISLDDKFLYL-SLW 340 (462)
T ss_dssp TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE-EECTTSCEEEE-EET
T ss_pred CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE-EECCCCCEEEE-EeC
Confidence 9999877654 0011256665433221000000 0000000 00 0111112 48999988885 666
Q ss_pred CCCCceEEEEcCCC
Q psy2521 391 NAPKGKVVTINLNN 404 (783)
Q Consensus 391 ~~~~~~L~~~d~~~ 404 (783)
.. ..|..+|+..
T Consensus 341 g~--d~VavfdV~d 352 (462)
T 2ece_A 341 GI--GEVRQYDISN 352 (462)
T ss_dssp TT--TEEEEEECSS
T ss_pred CC--CEEEEEEecC
Confidence 44 3577777753
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0015 Score=77.55 Aligned_cols=208 Identities=10% Similarity=0.071 Sum_probs=114.6
Q ss_pred EEEeeEEECCC--CcEEEEEEecCCCceEEEEEEECCCCcc--cc-ccccccccCeeEEeeC--CCEEEEEEeecCCCCC
Q psy2521 209 TALKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKD--YP-EVLKNVKFPSISWTHD--HKGFFYNQYCDINGTA 281 (783)
Q Consensus 209 ~~l~~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~--~~-~~~~~~~~~~~~WspD--g~~l~y~~~~~~~~~~ 281 (783)
..+..++|||+ |++|+.+.. + ..|++||+.+++. +. ..........++|+|+ ++.|+....
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~-D----g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~------- 121 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSY-D----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS------- 121 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEET-T----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-------
T ss_pred CceEEEEecCCCCCCEEEEEeC-C----CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-------
Confidence 34788999998 998886653 2 3599999998862 21 1112223468999999 887776662
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEec-------------CCcEEEEEEecCCCCcEEEEEE
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTD-------------CGRYLLVSTSNNTQGSDLHYFD 348 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~Sp-------------DGk~l~~~~~~~~~~~~l~~~d 348 (783)
...|.++++.+............ ......+.|+| ||+.|+....+ ..|.++|
T Consensus 122 ---------dg~I~vwdl~~~~~~~~~~~~~~--~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d----g~I~iwd 186 (753)
T 3jro_A 122 ---------DGKVSVVEFKENGTTSPIIIDAH--AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWK 186 (753)
T ss_dssp ---------TSEEEEEECCSSSCCCCEEEECC--SSCEEEEEECCCC---------CGGGCCEEEEETT----SCEEEEE
T ss_pred ---------CCcEEEEEeecCCCcceeEeecC--CCceEEEEecCcccccccccccCCCCCEEEEEECC----CeEEEEe
Confidence 23688888876533333333322 22356788999 58887755432 4688888
Q ss_pred CCCCCCCcccCCCCceeeecCcccee-E-EEEee---CCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC-CCCceE
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDHHH-E-IIANN---GPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE-DENRTL 422 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~d---g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~-~~~~~l 422 (783)
+.++.. . ........+..... . .|+|+ |+.|+..+. .+.|..+|+.++.......+... .....+
T Consensus 187 ~~~~~~-~----~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~----Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v 257 (753)
T 3jro_A 187 YNSDAQ-T----YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNEQGPWKKTLLKEEKFPDVL 257 (753)
T ss_dssp EETTTT-E----EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES----SSCEEEEEESSSSSCCBCCBSSSSCCSSCC
T ss_pred ccCCcc-c----ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec----CCEEEEecCCCCCCcceeEEeccCCCCCce
Confidence 876310 0 00111122222222 2 58998 555554333 23477777765431111112211 112223
Q ss_pred EEEEEeeCCEEEEEEecCCeeEEEEEECCCCc
Q psy2521 423 DVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 423 ~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~ 454 (783)
..+.+..++.++++...+| .|++|++.++.
T Consensus 258 ~~l~~spdg~~l~s~s~Dg--~I~vwd~~~~~ 287 (753)
T 3jro_A 258 WRASWSLSGNVLALSGGDN--KVTLWKENLEG 287 (753)
T ss_dssp CCEEECTTTCCEEEECSSS--CEECCBCCSSS
T ss_pred EEEEEcCCCCEEEEEcCCC--EEEEEecCCCC
Confidence 3333333355555555554 58888885443
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=97.63 E-value=0.024 Score=61.47 Aligned_cols=219 Identities=10% Similarity=0.018 Sum_probs=122.5
Q ss_pred EEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC--CCceeEEec
Q psy2521 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVEF 312 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~--~~d~~v~~~ 312 (783)
..|+.+|++++........-....+++|.+.+..||++.. ...+|++..+.... .....+...
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~---------------~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---------------SQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET---------------TTTEEEEEEC------CCCEEEECS
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec---------------CCCeEEEEEcccCCCCCcceEEEeC
Confidence 4689999988765432222122358899998889988862 13478888876422 122233331
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
.. ..-.++++.+.++.|++... ....|+++++++.. ...++. +...-.. .++|.++.||+....
T Consensus 157 ~~--~~p~glavD~~~~~lY~~d~---~~~~I~~~~~~g~~---------~~~l~~~~~~~P~~iavdp~~g~ly~td~~ 222 (400)
T 3p5b_L 157 DI--QAPDGLAVDWIHSNIYWTDS---VLGTVSVADTKGVK---------RKTLFRENGSKPRAIVVDPVHGFMYWTDWG 222 (400)
T ss_dssp SC--SCEEEEEEETTTTEEEEEET---TTTEEEEECTTTCS---------EEEEEECSSCCEEEEEEETTTTEEEEEECS
T ss_pred CC--CCcccEEEEecCCceEEEEC---CCCeEEEEeCCCCc---------eEEEEeCCCCCcceEEEecccCeEEEEeCC
Confidence 11 12256788887888877643 23689999998721 222332 2111112 477878888875432
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecC-C--CeEE
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-D--LGQI 466 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-~--~g~v 466 (783)
.+.+|+++++++.. .+.++... -..-.++.+. +++.||+.... ..+|+++|+ +|...+.+.. + ...-
T Consensus 223 --~~~~I~~~~~dG~~---~~~~~~~~-l~~P~glavd~~~~~lY~aD~~--~~~I~~~d~-dG~~~~~~~~~~~~l~~P 293 (400)
T 3p5b_L 223 --TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDV-NGGNRKTILEDEKRLAHP 293 (400)
T ss_dssp --SSCCEEEEETTSCS---CEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEET-TSCCCEEEEECSSTTSSE
T ss_pred --CCCEEEEEeCCCCc---cEEEEECC-CCceEEEEEEeCCCEEEEEECC--CCEEEEEeC-CCCccEEEEeCCCCCCCC
Confidence 23579999998754 34455433 2233455554 45788887543 368999999 5664444421 1 1111
Q ss_pred EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 467 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 467 ~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++. +++.+|++- + .-.+|+++|.
T Consensus 294 ~gl~v--~~~~lywtd--~-~~~~V~~~~~ 318 (400)
T 3p5b_L 294 FSLAV--FEDKVFWTD--I-INEAIFSANR 318 (400)
T ss_dssp EEEEE--ETTEEEEEE--S-SSCSEEEEES
T ss_pred EEEEE--eCCEEEEec--C-CCCeEEEEEc
Confidence 23332 345566543 2 2246788875
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.018 Score=60.24 Aligned_cols=191 Identities=8% Similarity=0.023 Sum_probs=103.7
Q ss_pred eEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC--CCceEEEEEEECCCCccccccccccccCe
Q psy2521 182 SILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS--GSDWNTLHIKDVDTGKDYPEVLKNVKFPS 259 (783)
Q Consensus 182 ~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~--G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~ 259 (783)
..|++.+..++..+.++.... ....+..+.++|||+.++ +.... +.....|+.+|.++++............+
T Consensus 112 ~~i~~~d~~~~~~~~~~~~~~----~~~~~~~i~~d~~g~l~v-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (333)
T 2dg1_A 112 GGIFAATENGDNLQDIIEDLS----TAYCIDDMVFDSKGGFYF-TDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANG 186 (333)
T ss_dssp CEEEEECTTSCSCEEEECSSS----SCCCEEEEEECTTSCEEE-EECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEE
T ss_pred ceEEEEeCCCCEEEEEEccCc----cCCcccceEECCCCCEEE-EeccccccCCCceEEEEeCCCCEEEEeecCCCcccc
Confidence 457776654444442332111 112367789999997543 33211 11235799999888765432211112357
Q ss_pred eEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc-----eeEEecCCCCeeEEEEEEecCCcEEEEE
Q psy2521 260 ISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD-----IPVVEFPNGRSLGLHSEVTDCGRYLLVS 334 (783)
Q Consensus 260 ~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d-----~~v~~~~~~~~~~~~~~~SpDGk~l~~~ 334 (783)
++|+|||+.||++... ...|+++++.+....- ......+.. ....++.+++||+..+ .
T Consensus 187 i~~~~dg~~l~v~~~~---------------~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v-~ 249 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT---------------ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYV-A 249 (333)
T ss_dssp EEECTTSSEEEEEEGG---------------GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEE-E
T ss_pred eEECCCCCEEEEEeCC---------------CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEE-E
Confidence 8999999988877621 2368888875421111 111111111 1335688999998443 2
Q ss_pred EecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc-------cceeEEEEeeCCEEEEEECCC--CCCceEEEEcCCCC
Q psy2521 335 TSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM-------DHHHEIIANNGPELIVKTTKN--APKGKVVTINLNNP 405 (783)
Q Consensus 335 ~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~-------~~~~~~~s~dg~~l~~~t~~~--~~~~~L~~~d~~~~ 405 (783)
.. ....|+++|.++. . ...+..+. ...-..|++||+.||+.++.+ .....|+++++...
T Consensus 250 ~~---~~~~v~~~d~~g~---~------~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 250 MY---GQGRVLVFNKRGY---P------IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp EE---TTTEEEEECTTSC---E------EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSC
T ss_pred Ec---CCCEEEEECCCCC---E------EEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccC
Confidence 21 1258899988541 1 11111111 111124788988999877653 22457999987654
Q ss_pred C
Q psy2521 406 C 406 (783)
Q Consensus 406 ~ 406 (783)
.
T Consensus 318 g 318 (333)
T 2dg1_A 318 G 318 (333)
T ss_dssp B
T ss_pred c
Confidence 3
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.0035 Score=65.12 Aligned_cols=136 Identities=13% Similarity=0.030 Sum_probs=75.2
Q ss_pred EEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC
Q psy2521 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN 314 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~ 314 (783)
..|+.+|.++|+..... ......+++|+|||+.||++..... ......|+++++.........++....
T Consensus 169 ~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~----------~~~~~~i~~~~~~~~~l~~~~~~~~~~ 237 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQ----------GHGSVEITAFAWRDGALHDRRHFASVP 237 (305)
T ss_dssp EEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC-------------CCCEEEEEEEETTEEEEEEEEECCS
T ss_pred CeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCc----------CCCCCEEEEEEecCCCccCCeEEEECC
Confidence 57999999888765433 2222357899999998887763210 012357888877543211111222111
Q ss_pred CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCC
Q psy2521 315 GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPK 394 (783)
Q Consensus 315 ~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~ 394 (783)
.....++.+++||+ |.+. . ...|++++.++. . ...+..+.......|+++++.||+.++.
T Consensus 238 -~~~pdgi~~d~~G~-lwv~-~----~~gv~~~~~~g~---~------~~~~~~~~~~~~~~f~~d~~~L~it~~~---- 297 (305)
T 3dr2_A 238 -DGLPDGFCVDRGGW-LWSS-S----GTGVCVFDSDGQ---L------LGHIPTPGTASNCTFDQAQQRLFITGGP---- 297 (305)
T ss_dssp -SSCCCSEEECTTSC-EEEC-C----SSEEEEECTTSC---E------EEEEECSSCCCEEEECTTSCEEEEEETT----
T ss_pred -CCCCCeEEECCCCC-EEEe-c----CCcEEEECCCCC---E------EEEEECCCceeEEEEeCCCCEEEEEcCC----
Confidence 11123577899998 3332 2 245899988651 0 1111111111122577888899987753
Q ss_pred ceEEEEcC
Q psy2521 395 GKVVTINL 402 (783)
Q Consensus 395 ~~L~~~d~ 402 (783)
.|+++++
T Consensus 298 -~l~~~~~ 304 (305)
T 3dr2_A 298 -CLWMLPL 304 (305)
T ss_dssp -EEEEEEC
T ss_pred -eEEEEEC
Confidence 5887764
|
| >2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00027 Score=76.00 Aligned_cols=88 Identities=16% Similarity=0.083 Sum_probs=52.3
Q ss_pred CccEEEEecCCCCCccC-----CcCcH---HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHH
Q psy2521 554 RNPVIIYGYGGYGVSVL-----PTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY 625 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~-----~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~ 625 (783)
..|.||++||..+.... ..|.. .+...|+++||.|+++|++| +|..+..+ .++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~~a----------~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWDRA----------CEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHHHH----------HHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCccccH----------HHHHHHHHh
Confidence 34568889998765321 22332 22355666799999999999 44333221 111111110
Q ss_pred --------HHHc---------------CCCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 626 --------MINK---------------KYTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 626 --------l~~~---------------~~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
+.+. .....+++.|+||||||+++..++.
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~ 123 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVS 123 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHH
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHH
Confidence 1100 0123468999999999999998886
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0095 Score=59.88 Aligned_cols=194 Identities=11% Similarity=0.112 Sum_probs=116.6
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.++.|+ |+ .||.+.-. .....|.+.++.+......+ ..+. . . ++...+++|+.|......
T Consensus 46 qGL~~~-~~-~LyestG~-------------~g~S~v~~vD~~Tgkv~~~~--~l~~-~-~-FgeGit~~g~~ly~ltw~ 105 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGL-------------NGRSSIRKVDIESGKTLQQI--ELGK-R-Y-FGEGISDWKDKIVGLTWK 105 (262)
T ss_dssp EEEEEE-TT-EEEEEEEE-------------TTEEEEEEECTTTCCEEEEE--ECCT-T-C-CEEEEEEETTEEEEEESS
T ss_pred ceEEEE-CC-EEEEECCC-------------CCCceEEEEECCCCcEEEEE--ecCC-c-c-ceeEEEEeCCEEEEEEee
Confidence 378887 54 66666522 12346888888776432221 1222 1 1 344566788888766443
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 417 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~ 417 (783)
.+.++++|.+++. . ...+..+ ..++ .+++||++||. ++. ..+|+.+|.++.+. ...+.-..
T Consensus 106 ---~~~v~v~D~~t~~--~------~~ti~~~-~eG~-glt~dg~~L~~-SdG---s~~i~~iDp~T~~v--~~~I~V~~ 166 (262)
T 3nol_A 106 ---NGLGFVWNIRNLR--Q------VRSFNYD-GEGW-GLTHNDQYLIM-SDG---TPVLRFLDPESLTP--VRTITVTA 166 (262)
T ss_dssp ---SSEEEEEETTTCC--E------EEEEECS-SCCC-CEEECSSCEEE-CCS---SSEEEEECTTTCSE--EEEEECEE
T ss_pred ---CCEEEEEECccCc--E------EEEEECC-CCce-EEecCCCEEEE-ECC---CCeEEEEcCCCCeE--EEEEEecc
Confidence 3799999998841 1 1112211 1223 36788988876 442 35699999887542 22221111
Q ss_pred CC---ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC------------CeEEEeeeccccccEEEEEE
Q psy2521 418 EN---RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD------------LGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 418 ~~---~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~------------~g~v~~~s~~~d~~~l~~~~ 482 (783)
.+ ..+..+.+.+ +.|++..-.. ..|.++|+++|+.+..|.++ .....++..+++.+.+|++-
T Consensus 167 ~g~~~~~lNELe~~~-G~lyan~w~~--~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 167 HGEELPELNELEWVD-GEIFANVWQT--NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTEECCCEEEEEEET-TEEEEEETTS--SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCccccccceeEEEC-CEEEEEEccC--CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 11 2233345555 6887665433 47999999999988887653 12346788888899999888
Q ss_pred ecCCCCceEEEEeC
Q psy2521 483 TSFLQPGTIYHCNI 496 (783)
Q Consensus 483 ss~~~P~~vy~~d~ 496 (783)
--| +.+|++.+
T Consensus 244 K~W---p~~~ev~~ 254 (262)
T 3nol_A 244 KLW---PKVFEITL 254 (262)
T ss_dssp TTC---SEEEEEEE
T ss_pred CCC---CceEEEEE
Confidence 777 46777665
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.018 Score=67.96 Aligned_cols=185 Identities=9% Similarity=0.001 Sum_probs=107.9
Q ss_pred EEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC--CCceeEEe-c
Q psy2521 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVE-F 312 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~--~~d~~v~~-~ 312 (783)
.|+.+++.+++............+++|.+.+..||++.. ...+|++..+.... .....+.. .
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~---------------~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---------------SQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp SEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET---------------TTTEEEEEEC--------CEEEECSS
T ss_pred ceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec---------------cceeEEEEeccCCCCCcceeEEEecC
Confidence 478888887664433222222357889888888888762 13478888876431 12233333 2
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
...+ .++++.+.++.|++... ....|+++++++.. .+.++. ....-.. .++|.++.||+.- .
T Consensus 470 l~~P---~GLAvD~~~~~LY~tD~---~~~~I~v~~ldG~~---------~~~l~~~~l~~P~gIaVDp~~g~LYwtD-~ 533 (791)
T 3m0c_C 470 IQAP---DGLAVDWIHSNIYWTDS---VLGTVSVADTKGVK---------RKTLFRENGSKPRAIVVDPVHGFMYWTD-W 533 (791)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSSS---------EEEEEECTTCCEEEEEEETTTTEEEEEE-C
T ss_pred CCCc---ceeeeeecCCcEEEEec---CCCeEEEEeCCCCe---------EEEEEeCCCCCcceEEEecCCCCEEEec-C
Confidence 2222 46788889998887643 23689999998721 222332 2111112 4778878888754 2
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeee
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l 459 (783)
+ ...+|.++++++.. .+.++... -..-.++.+. .++.||++-.. ..+|+++++ +|..++.+
T Consensus 534 g-~~~~I~~~~~dG~~---~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~--~~~I~~~d~-dG~~~~~v 595 (791)
T 3m0c_C 534 G-TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDV-NGGNRKTI 595 (791)
T ss_dssp S-SSCEEEEEETTSCC---EEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEET-TSCSCEEE
T ss_pred C-CCCeEEEEecCCCc---eEEEEeCC-CCCceEEEEecCCCeEEEEeCC--CCcEEEEec-CCCceEEE
Confidence 2 23579999998755 34555443 2233445544 34788887543 368999999 67654444
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.037 Score=56.34 Aligned_cols=237 Identities=9% Similarity=0.023 Sum_probs=121.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc------cccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN------VKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~------~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
...+++++|||+.+ ..+.. ...|+++|.++.......... ....++++++.+..|+.+...
T Consensus 31 ~p~~v~~~~~g~l~--v~~~~---~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-------- 97 (286)
T 1q7f_A 31 EPSGVAVNAQNDII--VADTN---NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-------- 97 (286)
T ss_dssp CEEEEEECTTCCEE--EEEGG---GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG--------
T ss_pred CCceEEECCCCCEE--EEECC---CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC--------
Confidence 35678899999833 33321 246899998743322111100 122467775334456655521
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
....|++++... +....+.... .....++.++|||+ |++... ....|+++|.++. . .
T Consensus 98 ------~~~~i~~~d~~g---~~~~~~~~~~-~~~~~~i~~~~~g~-l~v~~~---~~~~i~~~~~~g~---~------~ 154 (286)
T 1q7f_A 98 ------PTHQIQIYNQYG---QFVRKFGATI-LQHPRGVTVDNKGR-IIVVEC---KVMRVIIFDQNGN---V------L 154 (286)
T ss_dssp ------GGCEEEEECTTS---CEEEEECTTT-CSCEEEEEECTTSC-EEEEET---TTTEEEEECTTSC---E------E
T ss_pred ------CCCEEEEECCCC---cEEEEecCcc-CCCceEEEEeCCCC-EEEEEC---CCCEEEEEcCCCC---E------E
Confidence 123566665321 1112222211 11235788999998 433321 2368999987541 0 1
Q ss_pred eeee--cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 364 KTVI--PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 364 ~~l~--~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
..+. .....-.. .++++|+ +|+.... +..|++++.++.. ...+...........+.+..++.|++....+
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQE-IFISDNR---AHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSE-EEEEEGG---GTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred EEeCCCCccCCcEEEEECCCCC-EEEEECC---CCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 1111 11111112 4777765 6664332 3569999875432 2233222211233455554446777765443
Q ss_pred CeeEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+ ..|.+|+. +|+.+..+... .....++..++++ .++++ + .. .++..++.
T Consensus 228 ~-~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~-~~--~~v~v~~~ 278 (286)
T 1q7f_A 228 N-FNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVLA-S-KD--YRLYIYRY 278 (286)
T ss_dssp S-CEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEEE-E-TT--TEEEEEEC
T ss_pred C-EEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC-cEEEE-C-CC--CeEEEEEc
Confidence 2 37999997 68776666543 1224456666766 46666 3 22 57777776
|
| >4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00041 Score=77.06 Aligned_cols=112 Identities=19% Similarity=0.218 Sum_probs=76.9
Q ss_pred CCccEEEEecCCCCCccCCcC--cHHHHHHHHcCCEEEEEecCCCCCCCChhHHh--h------ccccCCcChHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTF--SISRCMFLRHFNGIYAIPNIRGGGELGEDWHN--A------GRLLKKQNCFDDFQAA 622 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~--~------g~~~~~~~~~~D~~a~ 622 (783)
+..|++||+ ||-+.. .... ...+..+..+.|..+++..+|= ||++.-- . -+...-...+.|+..-
T Consensus 41 ~~gPIfl~~-gGEg~~-~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~f 115 (472)
T 4ebb_A 41 GEGPIFFYT-GNEGDV-WAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAEL 115 (472)
T ss_dssp TTCCEEEEE-CCSSCH-HHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHHH
T ss_pred CCCcEEEEE-CCCccc-cccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHHH
Confidence 346888888 443321 1111 1113344556799999999997 6665321 1 1112334568899999
Q ss_pred HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 623 AEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 623 ~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+++++..-.....++.++|+|+||.|++++-..+|++|.++++.++.
T Consensus 116 i~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSAp 162 (472)
T 4ebb_A 116 LRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAP 162 (472)
T ss_dssp HHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccc
Confidence 99987764344468999999999999999999999999999887663
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.054 Score=63.93 Aligned_cols=206 Identities=8% Similarity=0.024 Sum_probs=119.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCc----cccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGK----DYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~----~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..++.+++.+.+|.|+- ... ..|+.+++.+.. ...... .-....+++..+.++.||++..
T Consensus 426 ~~gl~~d~~~~~lY~sD-~~~---~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~----------- 490 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSD-LSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 490 (791)
T ss_dssp EEEEEEETTTTEEEEEE-TTT---TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----------
T ss_pred eEEEeecccCCeeEEee-ccc---eeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEec-----------
Confidence 45688888777776553 322 368888887632 111111 1112357888778888888762
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...+|++.++.... ..+++...-..| .++++.|.+.+|+++... ....|+++++++. ....
T Consensus 491 ----~~~~I~v~~ldG~~-~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g--~~~~I~~~~~dG~---------~~~~ 551 (791)
T 3m0c_C 491 ----VLGTVSVADTKGVK-RKTLFRENGSKP---RAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV---------DIYS 551 (791)
T ss_dssp ----TTTEEEEEETTSSS-EEEEEECTTCCE---EEEEEETTTTEEEEEECS--SSCEEEEEETTSC---------CEEE
T ss_pred ----CCCeEEEEeCCCCe-EEEEEeCCCCCc---ceEEEecCCCCEEEecCC--CCCeEEEEecCCC---------ceEE
Confidence 23478888886542 222332222222 578899999998876532 2368999999872 1222
Q ss_pred eecCc-cceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGM-DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~-~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
++... ..-.. .+++.+++||+.- ..+.+|.++++++.. .+.++.... .....++.+.. ++||++....
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~dG~~---~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~-- 622 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN-- 622 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETTT--
T ss_pred EEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEecCCCc---eEEEecCCCccCCCCEEEEeC-CEEEEEECCC--
Confidence 33221 11111 4777788999863 234679999998755 345554321 11122455554 7888876543
Q ss_pred eEEEEEECCCCceeeee
Q psy2521 443 SVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l 459 (783)
..|++++..+|+.+..|
T Consensus 623 ~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 623 EAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TEEEEEETTTCCCCEEE
T ss_pred CEEEEEeCCCCcceEEe
Confidence 57888887678755444
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.46 E-value=0.019 Score=57.69 Aligned_cols=199 Identities=15% Similarity=0.126 Sum_probs=105.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++.++ || .|..+....| ...|+++|++||+.+....-.....+..-++++++||... ++
T Consensus 45 tqGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~lt---------------w~ 105 (262)
T 3nol_A 45 TEGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLT---------------WK 105 (262)
T ss_dssp EEEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEE---------------SS
T ss_pred cceEEEE-CC-EEEEECCCCC--CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEE---------------ee
Confidence 4667888 65 4554443333 3689999999999765332222222333456788887765 34
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G 369 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~ 369 (783)
...++.++..+..... -+.-+. .+...++||+.|+.+. + .++|+++|.++.. +. ....+.. +
T Consensus 106 ~~~v~v~D~~t~~~~~--ti~~~~-----eG~glt~dg~~L~~Sd--G--s~~i~~iDp~T~~---v~---~~I~V~~~g 168 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVR--SFNYDG-----EGWGLTHNDQYLIMSD--G--TPVLRFLDPESLT---PV---RTITVTAHG 168 (262)
T ss_dssp SSEEEEEETTTCCEEE--EEECSS-----CCCCEEECSSCEEECC--S--SSEEEEECTTTCS---EE---EEEECEETT
T ss_pred CCEEEEEECccCcEEE--EEECCC-----CceEEecCCCEEEEEC--C--CCeEEEEcCCCCe---EE---EEEEeccCC
Confidence 5578889887653221 122221 1235678999887642 2 3789999998731 10 0011111 1
Q ss_pred cccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe---ecC-----CCCceEEEEEEee-CCEEEEEEec
Q psy2521 370 MDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL---IPE-----DENRTLDVVAAVA-NNKLIVHYIQ 439 (783)
Q Consensus 370 ~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l---i~~-----~~~~~l~~~~~~~-g~~l~~~~~~ 439 (783)
..... .-....+++||..... ...|+++|.++++...+-.+ .+. ....++.++.+.. ++.|+++...
T Consensus 169 ~~~~~lNELe~~~G~lyan~w~---~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 169 EELPELNELEWVDGEIFANVWQ---TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EECCCEEEEEEETTEEEEEETT---SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccccceeEEECCEEEEEEcc---CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 11111 0011224578754432 23699999988762212221 111 1235677776654 3555554322
Q ss_pred CCeeEEEEEEC
Q psy2521 440 NVRSVMDLHDL 450 (783)
Q Consensus 440 ~g~~~l~~~dl 450 (783)
.++++.+.+
T Consensus 246 --Wp~~~ev~~ 254 (262)
T 3nol_A 246 --WPKVFEITL 254 (262)
T ss_dssp --CSEEEEEEE
T ss_pred --CCceEEEEE
Confidence 355555443
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0067 Score=68.12 Aligned_cols=183 Identities=11% Similarity=0.048 Sum_probs=96.5
Q ss_pred EeeEEE-C-CCCcEEEEEEec------C-------CCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEe
Q psy2521 211 LKLYAF-S-DNGKHFAYCLSK------S-------GSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQY 274 (783)
Q Consensus 211 l~~~~~-S-PDG~~la~~~~~------~-------G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~ 274 (783)
.-++.+ + |||+++...... + ......+-++|.++.++.... .++ ....+..+|||+++|.+..
T Consensus 136 phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~ 214 (595)
T 1fwx_A 136 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSY 214 (595)
T ss_dssp EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEES
T ss_pred CcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEec
Confidence 446666 6 999998554211 1 133457999999998765432 223 4568889999999998886
Q ss_pred ecCCCCC----CCCccc---------------c---cCCceEEEEEcCCCCCCc-eeEEecCCCCeeEEEEEEecCCcEE
Q psy2521 275 CDINGTA----DGTETT---------------A---HMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYL 331 (783)
Q Consensus 275 ~~~~~~~----~g~~~~---------------~---~~~~~v~~~~lgt~~~~d-~~v~~~~~~~~~~~~~~~SpDGk~l 331 (783)
+...+.. ...+.+ . .....|-..+..+..... +.....+..+ .++.+|||||++
T Consensus 215 ~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P---hGv~~sPDGk~v 291 (595)
T 1fwx_A 215 NSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP---HGCNMAPDKKHL 291 (595)
T ss_dssp CTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC---CCEEECTTSSEE
T ss_pred CcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc---eEEEEcCCCCEE
Confidence 6533210 000000 0 001235555554411111 1111222223 467899999999
Q ss_pred EEEEecCCCCcEEEEEECCCCC---CCcccCCCCce-eeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 332 LVSTSNNTQGSDLHYFDLHSLP---DGKISGKFPLK-TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 332 ~~~~~~~~~~~~l~~~dl~~g~---~~~l~~~~~~~-~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
++... ..+.+.++|+++.. ..++....... .+..+...-.-.|++|| .+|..... ...|..++++.
T Consensus 292 ~V~~~---~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~l---dsqV~kwdi~~ 361 (595)
T 1fwx_A 292 CVAGK---LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFL---DSQVVKWNIED 361 (595)
T ss_dssp EEECT---TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETT---TTEEEEEEHHH
T ss_pred EEeCC---CCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEec---CCcEEEEEhhH
Confidence 87532 33789999998520 00111111111 11112121122599999 66654433 24588888765
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.027 Score=57.56 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=117.3
Q ss_pred ceEEEEEEECCCCcccccc-ccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEE
Q psy2521 233 DWNTLHIKDVDTGKDYPEV-LKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVV 310 (783)
Q Consensus 233 d~~~i~v~Dl~tg~~~~~~-~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~ 310 (783)
....|+++|.++|+.+-.. ... .....+.++|||+.|+ +. + ..|+.++. ++ +.+.-+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~-~----------------~~V~~~d~-~G--~~~W~~ 71 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SY-S----------------KGAKMITR-DG--RELWNI 71 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-EC-B----------------SEEEEECT-TS--CEEEEE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eC-C----------------CCEEEECC-CC--CEEEEE
Confidence 3467999999999865422 221 1235788999997555 32 1 13555554 22 211222
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C---c-cce-eEEEEeeCCEE
Q psy2521 311 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G---M-DHH-HEIIANNGPEL 384 (783)
Q Consensus 311 ~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~---~-~~~-~~~~s~dg~~l 384 (783)
..+.. ....++.+++||+.++.... ....++.+|.++ + .+ +..-+. + . ... ...+.++|+.+
T Consensus 72 ~~~~~-~~~~~~~~~~dG~~lv~~~~---~~~~v~~vd~~G-k--~l-----~~~~~~~~~~~~~~~~~~v~~~~~G~~l 139 (276)
T 3no2_A 72 AAPAG-CEMQTARILPDGNALVAWCG---HPSTILEVNMKG-E--VL-----SKTEFETGIERPHAQFRQINKNKKGNYL 139 (276)
T ss_dssp ECCTT-CEEEEEEECTTSCEEEEEES---TTEEEEEECTTS-C--EE-----EEEEECCSCSSGGGSCSCCEECTTSCEE
T ss_pred cCCCC-ccccccEECCCCCEEEEecC---CCCEEEEEeCCC-C--EE-----EEEeccCCCCcccccccCceECCCCCEE
Confidence 22211 12356788999999875432 135777777644 1 10 111011 0 0 000 11366788766
Q ss_pred EEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC--
Q psy2521 385 IVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-- 462 (783)
Q Consensus 385 ~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-- 462 (783)
+.. . .+.+|+.+|.+ ++ ..|+.-.+. .........+ +.+++....+ .+|+.+|+++|+.+.++...
T Consensus 140 v~~-~---~~~~v~~~d~~-G~-~~w~~~~~~---~~~~~~~~~~-g~~~v~~~~~--~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 140 VPL-F---ATSEVREIAPN-GQ-LLNSVKLSG---TPFSSAFLDN-GDCLVACGDA--HCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp EEE-T---TTTEEEEECTT-SC-EEEEEECSS---CCCEEEECTT-SCEEEECBTT--SEEEEECTTTCCEEEEEEGGGS
T ss_pred EEe-c---CCCEEEEECCC-CC-EEEEEECCC---CccceeEcCC-CCEEEEeCCC--CeEEEEeCcCCcEEEEecCCCC
Confidence 532 2 24679999987 43 234433221 2222333444 5556555444 46999999779987666421
Q ss_pred ----CeEEEeeeccccccEEEEEEecCC------CCceEEEEeC
Q psy2521 463 ----LGQITHISGRRKYNEVFYGFTSFL------QPGTIYHCNI 496 (783)
Q Consensus 463 ----~g~v~~~s~~~d~~~l~~~~ss~~------~P~~vy~~d~ 496 (783)
...+.+....+++..++..+.+.. ...+++.+|.
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT
T ss_pred CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC
Confidence 112345555566766655554432 3567888876
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.017 Score=61.40 Aligned_cols=172 Identities=9% Similarity=0.025 Sum_probs=90.2
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEe------ecCCC-CCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQY------CDING-TADG 283 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~------~~~~~-~~~g 283 (783)
+....++++++.++++.... .+|++||+.+|+.+...........+.|+++. ++.... +-... ....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp CCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEETTEEEEEESSTTCCBSS
T ss_pred eEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeE
Confidence 45678899999988764322 48999999998765422111122456666542 222210 00000 0000
Q ss_pred Cc---------------cc-ccCCceEEEEEcCCCCC------C-------c-eeEEecCCCCeeEEEEEEecCCcEEEE
Q psy2521 284 TE---------------TT-AHMGQKIYYHVLGTEQD------K-------D-IPVVEFPNGRSLGLHSEVTDCGRYLLV 333 (783)
Q Consensus 284 ~~---------------~~-~~~~~~v~~~~lgt~~~------~-------d-~~v~~~~~~~~~~~~~~~SpDGk~l~~ 333 (783)
.. .. ......|.++++.+... . . ...+.. +......+.|||||++|+-
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~--h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKA--HTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECC--CSSCEEEEEECTTSSEEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEc--cCCceEEEEECCCCCEEEE
Confidence 00 00 12234577777765320 0 0 122222 2223568899999999875
Q ss_pred EEecCCCCcE-EEEEECCCCCCCcccCCCCceeeecC-cccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 334 STSNNTQGSD-LHYFDLHSLPDGKISGKFPLKTVIPG-MDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 334 ~~~~~~~~~~-l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
.+.+ .. |.++|+.++. ....+..+ ..... . .|+|||+.|+..+.. ..|..+|+..+.
T Consensus 213 ~s~d----~~~v~iwd~~~~~--------~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d----~~v~iw~~~~~~ 273 (355)
T 3vu4_A 213 CSQD----GTIIRVFKTEDGV--------LVREFRRGLDRADVVDMKWSTDGSKLAVVSDK----WTLHVFEIFNDQ 273 (355)
T ss_dssp EETT----CSEEEEEETTTCC--------EEEEEECTTCCSCEEEEEECTTSCEEEEEETT----CEEEEEESSCCS
T ss_pred EeCC----CCEEEEEECCCCc--------EEEEEEcCCCCCcEEEEEECCCCCEEEEEECC----CEEEEEEccCCC
Confidence 4322 44 9999998741 12223212 22222 2 599999887765543 457778876543
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.084 Score=57.59 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=120.9
Q ss_pred EECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 215 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 215 ~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
++++||++|+.+... ..|++||+.+++.+..... ......+.|+ ++.|+.... ...
T Consensus 124 ~~~~~g~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~----------------dg~ 180 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDD-----NTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST----------------DRT 180 (445)
T ss_dssp EEEEETTEEEEEETT-----SCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET----------------TSC
T ss_pred EEEEcCCEEEEEECC-----CcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC----------------CCe
Confidence 467789988866532 4699999999886532211 1122456665 455544441 235
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccce
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH 373 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~ 373 (783)
|.++++.+.. ....+... ......+.+ +++.|+.... ...|.++|+.++. ....+.+....
T Consensus 181 i~vwd~~~~~--~~~~~~~h--~~~v~~~~~--~~~~l~s~s~----dg~i~~wd~~~~~---------~~~~~~~~~~~ 241 (445)
T 2ovr_B 181 LKVWNAETGE--CIHTLYGH--TSTVRCMHL--HEKRVVSGSR----DATLRVWDIETGQ---------CLHVLMGHVAA 241 (445)
T ss_dssp EEEEETTTTE--EEEEECCC--SSCEEEEEE--ETTEEEEEET----TSEEEEEESSSCC---------EEEEEECCSSC
T ss_pred EEEEECCcCc--EEEEECCC--CCcEEEEEe--cCCEEEEEeC----CCEEEEEECCCCc---------EEEEEcCCccc
Confidence 7888886642 12222222 222334555 4666654332 2689999998731 11122222333
Q ss_pred eEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCC
Q psy2521 374 HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTG 453 (783)
Q Consensus 374 ~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G 453 (783)
...+..+|+.++..+. .+.|..+|+.++. ....+..+ ...+..+.+ +++. ++....++ .|.+||+.++
T Consensus 242 v~~~~~~~~~l~~~~~----dg~i~iwd~~~~~--~~~~~~~~--~~~v~~~~~-~~~~-l~~~~~d~--~i~i~d~~~~ 309 (445)
T 2ovr_B 242 VRCVQYDGRRVVSGAY----DFMVKVWDPETET--CLHTLQGH--TNRVYSLQF-DGIH-VVSGSLDT--SIRVWDVETG 309 (445)
T ss_dssp EEEEEECSSCEEEEET----TSCEEEEEGGGTE--EEEEECCC--SSCEEEEEE-CSSE-EEEEETTS--CEEEEETTTC
T ss_pred EEEEEECCCEEEEEcC----CCEEEEEECCCCc--EeEEecCC--CCceEEEEE-CCCE-EEEEeCCC--eEEEEECCCC
Confidence 3334457777765543 2458888886643 12223222 233444444 5344 44455553 5889999888
Q ss_pred ceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 454 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 454 ~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+..+......+..+.. +++.++ +.+ .-..+..+|+
T Consensus 310 ~~~~~~~~~~~~v~~~~~--~~~~l~-~~~---~dg~i~vwd~ 346 (445)
T 2ovr_B 310 NCIHTLTGHQSLTSGMEL--KDNILV-SGN---ADSTVKIWDI 346 (445)
T ss_dssp CEEEEECCCCSCEEEEEE--ETTEEE-EEE---TTSCEEEEET
T ss_pred CEEEEEcCCcccEEEEEE--eCCEEE-EEe---CCCeEEEEEC
Confidence 877777655444545443 344333 332 2347889998
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.011 Score=62.64 Aligned_cols=246 Identities=10% Similarity=0.040 Sum_probs=121.0
Q ss_pred EeeEEECCCCcEEEEEEec--CCCceEEEEEEECCCCcccccc-----c--cccccCeeEEeeCCCEEEEEEeecCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSK--SGSDWNTLHIKDVDTGKDYPEV-----L--KNVKFPSISWTHDHKGFFYNQYCDINGTA 281 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~--~G~d~~~i~v~Dl~tg~~~~~~-----~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 281 (783)
..++++||||+.++ +... +|. .+|+.++ +|+..+.. . .-....++++++||+ ||.+....
T Consensus 19 p~~va~~~~g~~~v-~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~----- 87 (343)
T 2qe8_A 19 PGNITLTPDGRLFL-SLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN----- 87 (343)
T ss_dssp EEEEEECTTSCEEE-EECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH-----
T ss_pred cceEEECCCCCEEE-EeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC-----
Confidence 56789999998533 3222 222 5677777 56543110 0 011235788988874 66654210
Q ss_pred CCCcccccCCceEEEEEcCCCCCCceeEEecCCC----CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 282 DGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG----RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 282 ~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~----~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
......+|+++++.++.. +..+..+.. ..+..++.+++++.++++..........|+++|+.++....+
T Consensus 88 -----~~~~~~~i~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 88 -----QSKSVPKLVAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV 160 (343)
T ss_dssp -----HHTSCCEEEEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE
T ss_pred -----CcCCCCeEEEEECCCCeE--EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE
Confidence 001134788888765431 122332211 113357888988777766543211337899999876421110
Q ss_pred cCC---C---CceeeecCc---------------cceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCC---CCCC----
Q psy2521 358 SGK---F---PLKTVIPGM---------------DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNN---PCEK---- 408 (783)
Q Consensus 358 ~~~---~---~~~~l~~~~---------------~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~---~~~~---- 408 (783)
... . +......+. ..... .|++||+.||+.... ..+|++++.+. +...
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~---~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH---STSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS---CSEEEEEEHHHHTCTTCCHHHH
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC---CCeEEEEEHHHhcCCCCChhhh
Confidence 000 0 000000000 01112 589999999886543 23799987531 1100
Q ss_pred --CcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEe
Q psy2521 409 --NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 409 --~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~s 483 (783)
.+. ...+. . ...++.+..++.|++....+ ..|.+||.++|+....+..+ .....++...++ ..++++-+
T Consensus 238 ~~~~~-~~g~~-g-~pdgia~d~~G~l~va~~~~--~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~ 309 (343)
T 2qe8_A 238 GSKIE-RYSEK-P-ICDGISIDKDHNIYVGDLAH--SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCN 309 (343)
T ss_dssp HTTCE-EEEEC-C-SCSCEEECTTCCEEEEEGGG--TEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEEC
T ss_pred hcceE-ecccC-C-CCceEEECCCCCEEEEccCC--CeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeC
Confidence 011 11111 1 12234444446677665443 57999998567643333333 222344555555 35666554
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0042 Score=67.24 Aligned_cols=76 Identities=9% Similarity=-0.116 Sum_probs=49.8
Q ss_pred cEEEeeEEECC--------CCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCC
Q psy2521 208 TTALKLYAFSD--------NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDIN 278 (783)
Q Consensus 208 ~~~l~~~~~SP--------DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~ 278 (783)
.-.+..++||| ||++||=+.+ ..+|+|||+.++..+.... .......++|+|++..++.+...
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~-----D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~--- 207 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGD-----DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGER--- 207 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEET-----TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEET---
T ss_pred CCceEEEEEccccccccCCCCCEEEEEEC-----CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCC---
Confidence 34478889988 9998885543 3689999998776443222 12223578999998766655522
Q ss_pred CCCCCCcccccCCceEEEEEcCCCC
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQ 303 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~ 303 (783)
...|.++++.+++
T Consensus 208 ------------d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 208 ------------NGNIRIFDWTLNL 220 (393)
T ss_dssp ------------TSEEEEEETTCCC
T ss_pred ------------CCEEEEEECCCCc
Confidence 2357777776653
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.041 Score=59.82 Aligned_cols=155 Identities=6% Similarity=0.016 Sum_probs=88.3
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc----c-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV----L-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~----~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
++|+|||++|..+ +..+. ..|+++|..++...... . ......+++++|++..||+.. .
T Consensus 176 ia~~~~g~~l~~~-d~~~~--~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d--~------------ 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSI-GWEGT--HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD--S------------ 238 (409)
T ss_dssp CEECTTSSEEEEE-BSSTT--CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC--T------------
T ss_pred eeEecCCCcEEEE-ecCCC--ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE--C------------
Confidence 8899999976554 44333 27999998876542111 1 122335789999777787732 1
Q ss_pred cCCceEEEEEcCCCCCCceeEEec---CCCCeeE-E-EEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEF---PNGRSLG-L-HSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~---~~~~~~~-~-~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
..+|+++++.+.. ..++.. .....+. . ++.++|++..|++... ....|+.++.++. .
T Consensus 239 --~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~---~~~~I~~~~~~g~----------~ 300 (409)
T 3hrp_A 239 --NKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ---NLSSVYKITPDGE----------C 300 (409)
T ss_dssp --TCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET---TTTEEEEECTTCC----------E
T ss_pred --CCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCCCCEEEEEeC---CCCEEEEEecCCC----------E
Confidence 2378888876542 223311 0111122 2 7899998788776532 2368999987651 1
Q ss_pred eeeecC---------------ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 364 KTVIPG---------------MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 364 ~~l~~~---------------~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
..+... ...-.. .++++|. ||+. +. ..+.+|.++++.++.
T Consensus 301 ~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyva-d~-~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 301 EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIV-DG-FKGYCLRKLDILDGY 356 (409)
T ss_dssp EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEE-ET-TTTCEEEEEETTTTE
T ss_pred EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEE-eC-CCCCEEEEEECCCCE
Confidence 111110 011111 4788877 7764 32 035679999965543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.1 Score=51.89 Aligned_cols=199 Identities=14% Similarity=0.149 Sum_probs=106.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++.+++ ..|..+.-..|. ..|+++|+++|+.+....-.....+..-++++++||-.. ++
T Consensus 23 tqGL~~~~--~~LyestG~~g~--S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~lt---------------w~ 83 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGR--SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLT---------------WR 83 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTS--CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE---------------SS
T ss_pred cccEEEEC--CEEEEECCCCCC--ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEE---------------ee
Confidence 45677875 455555443333 689999999999765432222222333456778887665 34
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G 369 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~ 369 (783)
...++.++..+.... --+.-+.. +...++||+.|+++. + .++|+++|.++.. .+ ....+.. +
T Consensus 84 ~~~v~v~D~~tl~~~--~ti~~~~~-----Gwglt~dg~~L~vSd--g--s~~l~~iDp~t~~--~~----~~I~V~~~g 146 (243)
T 3mbr_X 84 NHEGFVYDLATLTPR--ARFRYPGE-----GWALTSDDSHLYMSD--G--TAVIRKLDPDTLQ--QV----GSIKVTAGG 146 (243)
T ss_dssp SSEEEEEETTTTEEE--EEEECSSC-----CCEEEECSSCEEEEC--S--SSEEEEECTTTCC--EE----EEEECEETT
T ss_pred CCEEEEEECCcCcEE--EEEeCCCC-----ceEEeeCCCEEEEEC--C--CCeEEEEeCCCCe--EE----EEEEEccCC
Confidence 567888888764321 12222221 235578999887652 2 3689999998731 00 0011111 1
Q ss_pred cccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEE---eecC------CCCceEEEEEEee-CCEEEEEEe
Q psy2521 370 MDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKT---LIPE------DENRTLDVVAAVA-NNKLIVHYI 438 (783)
Q Consensus 370 ~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~---li~~------~~~~~l~~~~~~~-g~~l~~~~~ 438 (783)
..... .-....++++|..... ...|.++|+++++...+-. +.+. ....++.++.... ++.|+++..
T Consensus 147 ~~~~~lNeLe~~~G~lyanvw~---s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELLANVWL---TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EECCCEEEEEEETTEEEEEETT---TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccccceeeEEeCCEEEEEECC---CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 11011 1123345677754422 2369999998876221222 1111 1245777777654 356665543
Q ss_pred cCCeeEEEEEEC
Q psy2521 439 QNVRSVMDLHDL 450 (783)
Q Consensus 439 ~~g~~~l~~~dl 450 (783)
. .++++.+.+
T Consensus 224 ~--wp~~~~v~~ 233 (243)
T 3mbr_X 224 R--WPMLYEIRL 233 (243)
T ss_dssp T--CSEEEEEEE
T ss_pred C--CCcEEEEEE
Confidence 2 355665554
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0098 Score=67.09 Aligned_cols=195 Identities=5% Similarity=0.019 Sum_probs=106.3
Q ss_pred EeeEEECCC------CcEEEEEEecCCCceEEEEEEECCCCcccc----------ccc--cccccCeeEEeeCCCEEEEE
Q psy2521 211 LKLYAFSDN------GKHFAYCLSKSGSDWNTLHIKDVDTGKDYP----------EVL--KNVKFPSISWTHDHKGFFYN 272 (783)
Q Consensus 211 l~~~~~SPD------G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~----------~~~--~~~~~~~~~WspDg~~l~y~ 272 (783)
+..++|||+ |++||-+.. + .+|++||+.+++... .++ .......++|+|++ .|+-.
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~-D----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasg 283 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQ-E----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCG 283 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEET-T----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEE
T ss_pred EEEEEECCCCCCCCCCceEEEEec-C----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEE
Confidence 667899997 567775443 2 469999998775320 011 12233578999865 45444
Q ss_pred EeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEE--EEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 273 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHS--EVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~--~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
.. ...|.++++.++.. ....+..... ...++ .++|||..++++.+. ...|.++|+.
T Consensus 284 s~----------------DgtV~lWD~~~~~~-~~~~~~~H~~--~V~sv~~~~s~~g~~~laS~S~---D~tvklWD~~ 341 (524)
T 2j04_B 284 FK----------------NGFVAEFDLTDPEV-PSFYDQVHDS--YILSVSTAYSDFEDTVVSTVAV---DGYFYIFNPK 341 (524)
T ss_dssp ET----------------TSEEEEEETTBCSS-CSEEEECSSS--CEEEEEEECCTTSCCEEEEEET---TSEEEEECGG
T ss_pred eC----------------CCEEEEEECCCCCC-ceEEeecccc--cEEEEEEEcCCCCCeEEEEecc---CCeEEEEECC
Confidence 31 23688889876422 1222333222 23455 578998444444332 2688999987
Q ss_pred CCCCCcccCCCCceeeecCcc-c-eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE
Q psy2521 351 SLPDGKISGKFPLKTVIPGMD-H-HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA 427 (783)
Q Consensus 351 ~g~~~~l~~~~~~~~l~~~~~-~-~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~ 427 (783)
++. ....+..... . ... .|+|+++.|+. +.. ...|..+|+..+. ....+..+. ..+. .+.+
T Consensus 342 ~~~--------~~~~~~~~~~~~~v~~v~fsp~~~~l~s-~~~---d~tv~lwd~~~~~--~~~~l~gH~-~~V~-sva~ 405 (524)
T 2j04_B 342 DIA--------TTKTTVSRFRGSNLVPVVYCPQIYSYIY-SDG---ASSLRAVPSRAAF--AVHPLVSRE-TTIT-AIGV 405 (524)
T ss_dssp GHH--------HHCEEEEECSCCSCCCEEEETTTTEEEE-ECS---SSEEEEEETTCTT--CCEEEEECS-SCEE-EEEC
T ss_pred CCC--------cccccccccccCcccceEeCCCcCeEEE-eCC---CCcEEEEECcccc--cceeeecCC-CceE-EEEe
Confidence 621 0111111111 1 112 59999887553 332 2347778877644 124444443 3333 3433
Q ss_pred eeCCEEEEEEecCCeeEEEEEECC
Q psy2521 428 VANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 428 ~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
..++.++++...|+ .|.+||+.
T Consensus 406 Sp~g~~l~Sgs~Dg--tv~lwd~~ 427 (524)
T 2j04_B 406 SRLHPMVLAGSADG--SLIITNAA 427 (524)
T ss_dssp CSSCCBCEEEETTT--EEECCBSC
T ss_pred CCCCCeEEEEECCC--EEEEEech
Confidence 33355666777775 57788873
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.15 Score=51.54 Aligned_cols=229 Identities=13% Similarity=0.112 Sum_probs=122.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+.++.++|||+.+ + .+..+ ..|+++|.. ++...... ......++++++||+ ++++..
T Consensus 17 ~~~i~~d~~g~l~-v-~~~~~---~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 75 (299)
T 2z2n_A 17 PYGITVSDKGKVW-I-TQHKA---NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTEN-------------- 75 (299)
T ss_dssp EEEEEECTTSCEE-E-EETTT---TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred ccceEECCCCCEE-E-EecCC---CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCC--------------
Confidence 6778899999843 3 33222 358899988 65433221 112235778888875 665541
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI- 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~- 367 (783)
....|++++... + ...+..+.......++.+++||+..+ ... ....|+.+|.++ . .....
T Consensus 76 -~~~~i~~~~~~g---~-~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~---~~~~i~~~d~~g-~---------~~~~~~ 136 (299)
T 2z2n_A 76 -AANKIGRITKKG---I-IKEYTLPNPDSAPYGITEGPNGDIWF-TEM---NGNRIGRITDDG-K---------IREYEL 136 (299)
T ss_dssp -TTTEEEEECTTS---C-EEEEECSSTTCCEEEEEECTTSCEEE-EET---TTTEEEEECTTC-C---------EEEEEC
T ss_pred -CCCeEEEECCCC---c-EEEEeCCCcCCCceeeEECCCCCEEE-Eec---CCceEEEECCCC-C---------EEEecC
Confidence 123577666531 1 22233221122345778889987433 321 236889998833 1 11111
Q ss_pred c-CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe-ecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 368 P-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 368 ~-~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l-i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
. ....... .++++| .+|+.... ...|++++. ++. +..+ ++.. ......+....++.|++..... ..
T Consensus 137 ~~~~~~~~~i~~~~~g-~l~v~~~~---~~~i~~~~~-~g~---~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~--~~ 205 (299)
T 2z2n_A 137 PNKGSYPSFITLGSDN-ALWFTENQ---NNAIGRITE-SGD---ITEFKIPTP-ASGPVGITKGNDDALWFVEIIG--NK 205 (299)
T ss_dssp SSTTCCEEEEEECTTS-CEEEEETT---TTEEEEECT-TCC---EEEEECSST-TCCEEEEEECTTSSEEEEETTT--TE
T ss_pred CCCCCCCceEEEcCCC-CEEEEeCC---CCEEEEEcC-CCc---EEEeeCCCC-CCcceeEEECCCCCEEEEccCC--ce
Confidence 1 1111112 366665 57765532 346999998 433 3333 2222 2233445554446677665433 46
Q ss_pred EEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+++++ +|+. ..+..+ ...+.++..++++. +++.... ...++++|.
T Consensus 206 i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~d~ 253 (299)
T 2z2n_A 206 IGRITT-SGEI-TEFKIPTPNARPHAITAGAGID-LWFTEWG---ANKIGRLTS 253 (299)
T ss_dssp EEEECT-TCCE-EEEECSSTTCCEEEEEECSTTC-EEEEETT---TTEEEEEET
T ss_pred EEEECC-CCcE-EEEECCCCCCCceeEEECCCCC-EEEeccC---CceEEEECC
Confidence 899999 7775 334333 33455666666654 6654322 357888887
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.2 Score=54.40 Aligned_cols=226 Identities=10% Similarity=0.116 Sum_probs=118.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+..+++ ||++|+.+.. + ..|+++|+.+++.+.... .......+.|+ ++.|+....
T Consensus 176 v~~l~~--~~~~l~sg~~-d----g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--------------- 231 (435)
T 1p22_A 176 VLCLQY--DERVIITGSS-D----STVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSK--------------- 231 (435)
T ss_dssp EEEEEC--CSSEEEEEET-T----SCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEET---------------
T ss_pred EEEEEE--CCCEEEEEcC-C----CeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeC---------------
Confidence 444444 8988876543 2 459999999998654221 11122466775 344444431
Q ss_pred CCceEEEEEcCCCCCCce-eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 290 MGQKIYYHVLGTEQDKDI-PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~-~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...|.++++.+...... ...... ......+.+ ||++|+.... ...|.++|+.++. ....+.
T Consensus 232 -dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~s~~~----dg~i~vwd~~~~~---------~~~~~~ 293 (435)
T 1p22_A 232 -DRSIAVWDMASPTDITLRRVLVGH--RAAVNVVDF--DDKYIVSASG----DRTIKVWNTSTCE---------FVRTLN 293 (435)
T ss_dssp -TSCEEEEECSSSSCCEEEEEECCC--SSCEEEEEE--ETTEEEEEET----TSEEEEEETTTCC---------EEEEEE
T ss_pred -CCcEEEEeCCCCCCceeeeEecCC--CCcEEEEEe--CCCEEEEEeC----CCeEEEEECCcCc---------EEEEEc
Confidence 23577888876532211 122221 122334444 8888875533 2689999998741 111222
Q ss_pred CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 369 GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 369 ~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
+.......+..+++.++..+. .+.|..+|+.++. ....+..+ ...+..+.+ + +..+++...++ .|.+|
T Consensus 294 ~~~~~v~~~~~~~~~l~~g~~----dg~i~iwd~~~~~--~~~~~~~h--~~~v~~~~~-~-~~~l~sg~~dg--~i~vw 361 (435)
T 1p22_A 294 GHKRGIACLQYRDRLVVSGSS----DNTIRLWDIECGA--CLRVLEGH--EELVRCIRF-D-NKRIVSGAYDG--KIKVW 361 (435)
T ss_dssp CCSSCEEEEEEETTEEEEEET----TSCEEEEETTTCC--EEEEECCC--SSCEEEEEC-C-SSEEEEEETTS--CEEEE
T ss_pred CCCCcEEEEEeCCCEEEEEeC----CCeEEEEECCCCC--EEEEEeCC--cCcEEEEEe-c-CCEEEEEeCCC--cEEEE
Confidence 223333335557776665443 2458888987654 12233222 233445554 4 44555555554 68888
Q ss_pred ECCCCc---------eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 449 DLNTGK---------RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 449 dl~~G~---------~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|+.+++ .+..+....+.|..+.. ++..++ +. ..-..+..+|+
T Consensus 362 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~---s~Dg~i~iwd~ 412 (435)
T 1p22_A 362 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV-SS---SHDDTILIWDF 412 (435)
T ss_dssp EHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE-EC---CSSSEEEEEC-
T ss_pred ECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE-EE---eCCCEEEEEEC
Confidence 885444 33444443444444443 344333 22 23357888888
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.052 Score=54.58 Aligned_cols=202 Identities=11% Similarity=0.060 Sum_probs=115.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
+++++++||++.|..+.+. ...|+.+|++ |+.+... +.+ .+..++++.++|. ++.+. +
T Consensus 29 lSGla~~~~~~~L~aV~d~----~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~--E------------ 88 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK----PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISD--E------------ 88 (255)
T ss_dssp EEEEEEETTTTEEEEEEET----TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEE--T------------
T ss_pred cceeEEeCCCCEEEEEECC----CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEE--C------------
Confidence 8999999999887766654 2579999998 7655432 222 3456889987763 44443 1
Q ss_pred cCCceEEEEEcCCCCC-CceeEEe-----cCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC
Q psy2521 289 HMGQKIYYHVLGTEQD-KDIPVVE-----FPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP 362 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~-~d~~v~~-----~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~ 362 (783)
+.+++++..++.... ..+.... .+.+.. +-+++|+|+++.|++...+ ....||.++--- .. ..
T Consensus 89 -~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g-~EGLA~d~~~~~L~va~E~--~p~~i~~~~g~~--~~-----~~ 157 (255)
T 3qqz_A 89 -RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCG-FEGLAYSRQDHTFWFFKEK--NPIEVYKVNGLL--SS-----NE 157 (255)
T ss_dssp -TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSC-CEEEEEETTTTEEEEEEES--SSEEEEEEESTT--CS-----SC
T ss_pred -CCCcEEEEEcCCCCeeeeeeeeccccccccccCC-cceEEEeCCCCEEEEEECc--CCceEEEEcccc--cC-----Cc
Confidence 235688777765432 0111111 111222 3689999999988776544 235788887100 00 00
Q ss_pred ceeee--------cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-----CCceEEEEEEee
Q psy2521 363 LKTVI--------PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-----ENRTLDVVAAVA 429 (783)
Q Consensus 363 ~~~l~--------~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-----~~~~l~~~~~~~ 429 (783)
...+. .-.+..--.+.|..++||+++.. ...|+.+|.++.- .....|.+.. .-..-+++.+..
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~---s~~L~~~d~~g~~-~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE---SRALQEVTLVGEV-IGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT---TTEEEEECTTCCE-EEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECC---CCeEEEEcCCCCE-EEEEEcCCccCCcccccCCCCeeEECC
Confidence 11110 00111112478888899999875 3579999987532 1122232211 012346777776
Q ss_pred CCEEEEEEecCCeeEEEEEEC
Q psy2521 430 NNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 430 g~~l~~~~~~~g~~~l~~~dl 450 (783)
++.||+....+ .+|++..
T Consensus 234 ~G~lyIvsE~n---~~y~f~~ 251 (255)
T 3qqz_A 234 SGNIYIVSEPN---RFYRFTP 251 (255)
T ss_dssp TCCEEEEETTT---EEEEEEC
T ss_pred CCCEEEEcCCc---eEEEEEe
Confidence 67788876554 6788865
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.05 Score=54.68 Aligned_cols=190 Identities=8% Similarity=0.008 Sum_probs=114.7
Q ss_pred eeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecC
Q psy2521 259 SISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN 338 (783)
Q Consensus 259 ~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~ 338 (783)
++.|+ ++.||.+.. ...+|...++.+......+ . +. ..| +...+++|+.|......
T Consensus 59 GL~~~--~~~Ly~stG---------------~~g~v~~iD~~Tgkv~~~~-l--~~-~~F--geGit~~g~~Ly~ltw~- 114 (268)
T 3nok_A 59 GLVFH--QGHFFESTG---------------HQGTLRQLSLESAQPVWME-R--LG-NIF--AEGLASDGERLYQLTWT- 114 (268)
T ss_dssp EEEEE--TTEEEEEET---------------TTTEEEECCSSCSSCSEEE-E--CT-TCC--EEEEEECSSCEEEEESS-
T ss_pred eEEEE--CCEEEEEcC---------------CCCEEEEEECCCCcEEeEE-C--CC-Ccc--eeEEEEeCCEEEEEEcc-
Confidence 67775 567777662 1224888888877654443 2 22 212 34457788888765433
Q ss_pred CCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC
Q psy2521 339 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE 418 (783)
Q Consensus 339 ~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~ 418 (783)
.+.++++|.+++. . ...+..+ ..++. +++||++||. ++. ..+|+.+|.++.+. ...+.-...
T Consensus 115 --~~~v~V~D~~Tl~--~------~~ti~~~-~eGwG-Lt~Dg~~L~v-SdG---s~~l~~iDp~T~~v--~~~I~V~~~ 176 (268)
T 3nok_A 115 --EGLLFTWSGMPPQ--R------ERTTRYS-GEGWG-LCYWNGKLVR-SDG---GTMLTFHEPDGFAL--VGAVQVKLR 176 (268)
T ss_dssp --SCEEEEEETTTTE--E------EEEEECS-SCCCC-EEEETTEEEE-ECS---SSEEEEECTTTCCE--EEEEECEET
T ss_pred --CCEEEEEECCcCc--E------EEEEeCC-CceeE-EecCCCEEEE-ECC---CCEEEEEcCCCCeE--EEEEEeCCC
Confidence 3799999998831 0 1111111 22333 6689998876 452 34799999887542 222211111
Q ss_pred C---ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-------------CeEEEeeeccccccEEEEEE
Q psy2521 419 N---RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------LGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 419 ~---~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-------------~g~v~~~s~~~d~~~l~~~~ 482 (783)
. ..+..+.+.+ +.|++..-.. ..|.++|+++|+.+..|.+. .....++..+++.+.+|++-
T Consensus 177 g~~v~~lNeLe~~d-G~lyanvw~s--~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECAN-GVIYANIWHS--SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEET-TEEEEEETTC--SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEeC-CEEEEEECCC--CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 1 1234455555 6777665433 48999999999987777642 12456788888888888877
Q ss_pred ecCCCCceEEEEeC
Q psy2521 483 TSFLQPGTIYHCNI 496 (783)
Q Consensus 483 ss~~~P~~vy~~d~ 496 (783)
--| +.+|++.+
T Consensus 254 K~W---p~~~ev~~ 264 (268)
T 3nok_A 254 KLW---PRLFEVRL 264 (268)
T ss_dssp TTC---SEEEEEEE
T ss_pred CCC---CceEEEEE
Confidence 666 35776544
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.071 Score=52.96 Aligned_cols=194 Identities=11% Similarity=0.106 Sum_probs=116.0
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.++.|++ ..||.+.- ......|...++.++..... ...+... ++...+.+|+.|......
T Consensus 24 qGL~~~~--~~LyestG-------------~~g~S~v~~vD~~tgkv~~~--~~l~~~~---fgeGi~~~~~~ly~ltw~ 83 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTG-------------ETGRSSVRKVDLETGRILQR--AEVPPPY---FGAGIVAWRDRLIQLTWR 83 (243)
T ss_dssp EEEEEET--TEEEEEEC-------------CTTSCEEEEEETTTCCEEEE--EECCTTC---CEEEEEEETTEEEEEESS
T ss_pred ccEEEEC--CEEEEECC-------------CCCCceEEEEECCCCCEEEE--EeCCCCc---ceeEEEEeCCEEEEEEee
Confidence 3778863 56766661 12345788888887642211 1222221 334556678887765433
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED 417 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~ 417 (783)
.+.++++|.+++. ....+..+ ..++ .+++|+++||+ ++. ..+|+.+|.++.+. ...+--..
T Consensus 84 ---~~~v~v~D~~tl~--------~~~ti~~~-~~Gw-glt~dg~~L~v-Sdg---s~~l~~iDp~t~~~--~~~I~V~~ 144 (243)
T 3mbr_X 84 ---NHEGFVYDLATLT--------PRARFRYP-GEGW-ALTSDDSHLYM-SDG---TAVIRKLDPDTLQQ--VGSIKVTA 144 (243)
T ss_dssp ---SSEEEEEETTTTE--------EEEEEECS-SCCC-EEEECSSCEEE-ECS---SSEEEEECTTTCCE--EEEEECEE
T ss_pred ---CCEEEEEECCcCc--------EEEEEeCC-CCce-EEeeCCCEEEE-ECC---CCeEEEEeCCCCeE--EEEEEEcc
Confidence 3799999998831 01112222 2233 36788888886 553 34699999887542 12221111
Q ss_pred CC---ceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-------------CeEEEeeeccccccEEEEE
Q psy2521 418 EN---RTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-------------LGQITHISGRRKYNEVFYG 481 (783)
Q Consensus 418 ~~---~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-------------~g~v~~~s~~~d~~~l~~~ 481 (783)
.. ..+..+...+ +.|++..-.. ..|.++|+++|+.+..|.+. .....++..+++.+.+|++
T Consensus 145 ~g~~~~~lNeLe~~~-G~lyanvw~s--~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 145 GGRPLDNLNELEWVN-GELLANVWLT--SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp TTEECCCEEEEEEET-TEEEEEETTT--TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred CCcccccceeeEEeC-CEEEEEECCC--CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 11 2233445555 7777655332 47999999999987777532 1245678888888999988
Q ss_pred EecCCCCceEEEEeC
Q psy2521 482 FTSFLQPGTIYHCNI 496 (783)
Q Consensus 482 ~ss~~~P~~vy~~d~ 496 (783)
---| +.+|++.+
T Consensus 222 GK~w---p~~~~v~~ 233 (243)
T 3mbr_X 222 GKRW---PMLYEIRL 233 (243)
T ss_dssp ETTC---SEEEEEEE
T ss_pred CCCC---CcEEEEEE
Confidence 7777 46887766
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.27 Score=56.42 Aligned_cols=203 Identities=7% Similarity=0.016 Sum_probs=123.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..++.+++++.+|.++-.. . ..|+.++++++........+ ....+++..+.++.||++..
T Consensus 39 ~~~l~~d~~~~~lywtD~~-~---~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~--------------- 99 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDIS-L---KTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADT--------------- 99 (628)
T ss_dssp EEEEEEETTTTEEEEEETT-T---TEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEET---------------
T ss_pred eEEEEEECCCCEEEEEECC-C---CeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEEC---------------
Confidence 4578899988887665432 2 36889999876433221111 12357777777888888752
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
...+|.+.++.... ..+++...-..| .++++.|...+|+++... ....|+.+++++.. ...++.+
T Consensus 100 ~~~~I~v~~~dG~~-~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g--~~~~I~r~~~dG~~---------~~~l~~~ 164 (628)
T 4a0p_A 100 GTNRIEVSKLDGQH-RQVLVWKDLDSP---RALALDPAEGFMYWTEWG--GKPKIDRAAMDGSE---------RTTLVPN 164 (628)
T ss_dssp TTTEEEEEETTSTT-CEEEECSSCCCE---EEEEEETTTTEEEEEECS--SSCEEEEEETTSCS---------CEEEECS
T ss_pred CCCEEEEEecCCCc-EEEEEeCCCCCc---ccEEEccCCCeEEEeCCC--CCCEEEEEeCCCCc---------eEEEECC
Confidence 23478888886542 222222222223 578899988888876532 24799999998721 2233332
Q ss_pred ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 370 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 370 ~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
...-.. .+++++++||+.-. ....|.++++++.. ++++...-... .++.+.+ +.||++.... ..|.++
T Consensus 165 ~~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~~----~~v~~~~l~~P-~glav~~-~~ly~tD~~~--~~I~~~ 233 (628)
T 4a0p_A 165 VGRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLN----REVIADDLPHP-FGLTQYQ-DYIYWTDWSR--RSIERA 233 (628)
T ss_dssp CSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS----CEEEEECCSCE-EEEEEET-TEEEEEETTT--TEEEEE
T ss_pred CCCcceEEEccccCEEEEEEC---CCCEEEEEcCCCCc----eEEeeccCCCc-eEEEEEC-CEEEEecCCC--CEEEEE
Confidence 222112 47888899998543 34579999998754 23444332333 3556665 7888876543 478888
Q ss_pred ECCCCceeee
Q psy2521 449 DLNTGKRLHS 458 (783)
Q Consensus 449 dl~~G~~~~~ 458 (783)
|..+|+....
T Consensus 234 dk~tg~~~~~ 243 (628)
T 4a0p_A 234 NKTSGQNRTI 243 (628)
T ss_dssp ETTTCCSCEE
T ss_pred ECCCCCceEE
Confidence 8767764333
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.05 Score=56.71 Aligned_cols=240 Identities=12% Similarity=0.087 Sum_probs=122.3
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--------------------cccccCeeEEeeCCCEEEE
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------------KNVKFPSISWTHDHKGFFY 271 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--------------------~~~~~~~~~WspDg~~l~y 271 (783)
.+++|+|||+.+ |+...+ ..|+.+|.++++...... ......++++.+++..||.
T Consensus 22 ~~i~~d~~g~~l-~v~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 22 NSFTFDSTNKGF-YTSVQD----GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCEECCTTCSSE-EEECTT----SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred eEEEEcCCCCEE-EEEcCC----CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 357889998743 332222 358888887765432110 0011246788774446766
Q ss_pred EEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC--eeEEEEEEec-CCcEEEEEEecC----------
Q psy2521 272 NQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR--SLGLHSEVTD-CGRYLLVSTSNN---------- 338 (783)
Q Consensus 272 ~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~--~~~~~~~~Sp-DGk~l~~~~~~~---------- 338 (783)
... ...|++.+..+... ..+....... ....++.+.+ ||+ |.+.....
T Consensus 97 ~d~----------------~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 97 VDC----------------YYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp EET----------------TTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHH
T ss_pred EEC----------------CCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCE-EEEECCccccccccccee
Confidence 641 12355555432211 1121111111 1234678899 886 44433210
Q ss_pred ----CCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe
Q psy2521 339 ----TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL 413 (783)
Q Consensus 339 ----~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l 413 (783)
.....|+.+|.+++. ...+..+...... .+++||+.||+.... +.+|+++++++......+.+
T Consensus 158 ~~~~~~~g~v~~~d~~~~~---------~~~~~~~~~~p~gia~~~dg~~lyv~d~~---~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKE---------TTLLLKELHVPGGAEVSADSSFVLVAEFL---SHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHTCCCEEEEEEETTTTE---------EEEEEEEESCCCEEEECTTSSEEEEEEGG---GTEEEEEESSSTTTTCEEEE
T ss_pred hcccCCCceEEEEeCCCCE---------EEEeccCCccCcceEECCCCCEEEEEeCC---CCeEEEEECCCCcCCccceE
Confidence 112679999987631 1112221111112 488999888875432 45799999876322223333
Q ss_pred ecCCCCceEEEEEEeeCCEEEEEEec--------CCeeEEEEEECCCCceeeeecCCCe----EEEeeeccccccEEEEE
Q psy2521 414 IPEDENRTLDVVAAVANNKLIVHYIQ--------NVRSVMDLHDLNTGKRLHSFPLDLG----QITHISGRRKYNEVFYG 481 (783)
Q Consensus 414 i~~~~~~~l~~~~~~~g~~l~~~~~~--------~g~~~l~~~dl~~G~~~~~l~~~~g----~v~~~s~~~d~~~l~~~ 481 (783)
.. ... ...+.+..++.|++.... .....|.++|. +|+.+..+..+.| .+..+. ..++.+|++
T Consensus 226 ~~-~~g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~--~~~g~L~v~ 299 (322)
T 2fp8_A 226 VK-IPN--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQ--EHDGLLYIG 299 (322)
T ss_dssp EE-CSS--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEE--EETTEEEEE
T ss_pred Ee-CCC--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEE--EeCCEEEEe
Confidence 32 212 344555544567766544 22467999998 6887777765532 122221 124566654
Q ss_pred EecCCCCceEEEEeC
Q psy2521 482 FTSFLQPGTIYHCNI 496 (783)
Q Consensus 482 ~ss~~~P~~vy~~d~ 496 (783)
- . .-..|.++++
T Consensus 300 ~--~-~~~~i~~~~~ 311 (322)
T 2fp8_A 300 T--L-FHGSVGILVY 311 (322)
T ss_dssp C--S-SCSEEEEEEC
T ss_pred e--c-CCCceEEEec
Confidence 2 2 2346777777
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.023 Score=57.08 Aligned_cols=193 Identities=11% Similarity=0.079 Sum_probs=102.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
..+++++|||+ |.+ .+.+ ..|+++|.+++......... ....+++++|||+ ||++..
T Consensus 69 p~~i~~~~~g~-l~v-~~~~----~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--------------- 126 (270)
T 1rwi_B 69 PQGLAVDGAGT-VYV-TDFN----NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADR--------------- 126 (270)
T ss_dssp CCCEEECTTCC-EEE-EETT----TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCC-EEEEEG---------------
T ss_pred cceeEECCCCC-EEE-EcCC----CEEEEEeCCCceEeeeecCCcCCCcceEECCCCC-EEEEEC---------------
Confidence 45688999999 333 3332 36899998876543222221 2235788989886 655541
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
....|++++.++... ..... .......++.+++||+ |++... ....|+++|.+++. . ......+
T Consensus 127 ~~~~i~~~~~~~~~~---~~~~~-~~~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~~~~--~------~~~~~~~ 190 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQ---TVLPF-TGLNDPDGVAVDNSGN-VYVTDT---DNNRVVKLEAESNN--Q------VVLPFTD 190 (270)
T ss_dssp GGTEEEEECTTCCSC---EECCC-CSCCSCCCEEECTTCC-EEEEEG---GGTEEEEECTTTCC--E------EECCCSS
T ss_pred CCCEEEEEECCCcee---Eeecc-ccCCCceeEEEeCCCC-EEEEEC---CCCEEEEEecCCCc--e------EeecccC
Confidence 123677775544321 11111 1111124678899998 444322 23689999987631 0 0000111
Q ss_pred ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 370 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 370 ~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
...-.. .++++| .||+.... +..|++++.++.. . ..++.........+.+..++.|++....+ .+|.++
T Consensus 191 ~~~p~~i~~d~~g-~l~v~~~~---~~~v~~~~~~~~~---~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~--~~v~~~ 260 (270)
T 1rwi_B 191 ITAPWGIAVDEAG-TVYVTEHN---TNQVVKLLAGSTT---S-TVLPFTGLNTPLAVAVDSDRTVYVADRGN--DRVVKL 260 (270)
T ss_dssp CCSEEEEEECTTC-CEEEEETT---TSCEEEECTTCSC---C-EECCCCSCSCEEEEEECTTCCEEEEEGGG--TEEEEE
T ss_pred CCCceEEEECCCC-CEEEEECC---CCcEEEEcCCCCc---c-eeeccCCCCCceeEEECCCCCEEEEECCC--CEEEEE
Confidence 111112 466776 67776543 3469999987643 1 22222211233445554435677765544 467888
Q ss_pred ECC
Q psy2521 449 DLN 451 (783)
Q Consensus 449 dl~ 451 (783)
++.
T Consensus 261 ~~~ 263 (270)
T 1rwi_B 261 TSL 263 (270)
T ss_dssp CCC
T ss_pred cCC
Confidence 774
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.05 Score=61.07 Aligned_cols=242 Identities=10% Similarity=0.004 Sum_probs=121.5
Q ss_pred EEECC-----CCcEEEEEEecCCCceEEEEEEECCCCccccc-cccc-cccCeeEE-e-eCCCEEEEEEeec-CCCCCCC
Q psy2521 214 YAFSD-----NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKN-VKFPSISW-T-HDHKGFFYNQYCD-INGTADG 283 (783)
Q Consensus 214 ~~~SP-----DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~-~~~~~~~W-s-pDg~~l~y~~~~~-~~~~~~g 283 (783)
+.+|. ||++|.. .+..+ ..|.++|+++.+.... ++.. ....++++ + ||++++|...... +-. .+|
T Consensus 90 ~~~s~t~g~~DG~~lfV-nd~~~---~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~-~dg 164 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFM-NDKAN---TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLV-NDG 164 (595)
T ss_dssp EEEEEETTEEEEEEEEE-EETTT---TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESS-CSS
T ss_pred cccCCCCCCcCCCEEEE-EcCCC---CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccC-CCC
Confidence 66676 9997755 44332 4699999999885441 2222 22346676 4 9999997764211 000 011
Q ss_pred Ccc--cccCCceEEEEEcCCCCCCceeEEecC--CCCeeEEEEEEecCCcEEEEEEecCCC-------------------
Q psy2521 284 TET--TAHMGQKIYYHVLGTEQDKDIPVVEFP--NGRSLGLHSEVTDCGRYLLVSTSNNTQ------------------- 340 (783)
Q Consensus 284 ~~~--~~~~~~~v~~~~lgt~~~~d~~v~~~~--~~~~~~~~~~~SpDGk~l~~~~~~~~~------------------- 340 (783)
... .......+-.++..+.. ++++-+ .++ ..+..||||+|++.+...+..
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~~----v~~qI~Vgg~p---d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~ 237 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKWE----VAWQVLVSGNL---DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFN 237 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTTE----EEEEEEESSCC---CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEE
T ss_pred cccccccccCceEEEEECCCCe----EEEEEEeCCCc---cceEECCCCCEEEEEecCcccCcchhhccccccceEEEee
Confidence 110 11223356666666532 222211 123 246789999999887744311
Q ss_pred ---------------CcEEEEEECCCCCCCcccCCCC-ceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 341 ---------------GSDLHYFDLHSLPDGKISGKFP-LKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 341 ---------------~~~l~~~dl~~g~~~~l~~~~~-~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
.+.+.++|.++.+ ... ...+..+....--.++|||+++|+ ++...+ .+..+|+++
T Consensus 238 ~~~~~~~v~~Gk~~~i~~V~VID~~~~~------~~~~~~~Ipvg~~PhGv~~sPDGk~v~V-~~~~s~--~VsVid~~~ 308 (595)
T 1fwx_A 238 IAEIEKAIAAGDYQELNGVKVVDGRKEA------SSLFTRYIPIANNPHGCNMAPDKKHLCV-AGKLSP--TVTVLDVTR 308 (595)
T ss_dssp HHHHHHHHHHTCSEEETTEEEEECSGGG------CCSSEEEEEEESSCCCEEECTTSSEEEE-ECTTSS--BEEEEEGGG
T ss_pred ccceeEeccCCCeeEECcEEEEeCcccC------CceeEEEEecCCCceEEEEcCCCCEEEE-eCCCCC--eEEEEECcc
Confidence 0236666766510 011 111111111111259999998775 555443 477777764
Q ss_pred CC--------CC-CcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCC----------CceeeeecCC--C
Q psy2521 405 PC--------EK-NWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNT----------GKRLHSFPLD--L 463 (783)
Q Consensus 405 ~~--------~~-~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~----------G~~~~~l~~~--~ 463 (783)
.. .. ....-++-+ .......+..+ +.+|++...+ ++|.+||+++ .+.+..++.. .
T Consensus 309 ~~~~~~~~l~~~~~v~~~v~vG-~gP~h~aF~~d-G~aY~t~~ld--sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 309 FDAVFYENADPRSAVVAEPELG-LGPLHTAFDGR-GNAYTSLFLD--SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp HHHHHHSCCCGGGGEEECCBCC-SCEEEEEECTT-SEEEEEETTT--TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred cccccccccCcccceEEEcCCC-CCcceEEECCC-CeEEEEEecC--CcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 21 00 011111212 22333233344 4555554444 6788899854 2344555543 2
Q ss_pred eEEEe---eeccccccEEEE
Q psy2521 464 GQITH---ISGRRKYNEVFY 480 (783)
Q Consensus 464 g~v~~---~s~~~d~~~l~~ 480 (783)
|.... ...++|++.++.
T Consensus 385 Gh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 385 GHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp EEEEETTTTSTTCCSSEEEE
T ss_pred ccceeccceEeCCCCCEEEE
Confidence 43322 244677776654
|
| >1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0016 Score=65.28 Aligned_cols=145 Identities=13% Similarity=0.048 Sum_probs=84.1
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcH----------------HHHHHHHcCCEEEE
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSI----------------SRCMFLRHFNGIYA 589 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~----------------~~~~~l~~~G~~v~ 589 (783)
-.+.+....|..+..+.+..+. .....|++|+++||||.+... .... .-..|.. -..++
T Consensus 22 Gy~~v~~~~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~~--~anvl 97 (255)
T 1whs_A 22 GYITVDEGAGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWNK--VANVL 97 (255)
T ss_dssp EEEEEETTTTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGGG--TSEEE
T ss_pred EEEECCCCCCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccccc--cCCEE
Confidence 3455555567788887765443 235689999999999987654 2100 0113333 36688
Q ss_pred EecCCCCCCCChhHHhhcc-ccCCcChHHHHHHHHHH-HHHcCCCCCCcEEEEEeChhHHHHHHHHhc-----CC-Ccee
Q psy2521 590 IPNIRGGGELGEDWHNAGR-LLKKQNCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACLNQ-----RP-ELYG 661 (783)
Q Consensus 590 ~~~~RG~g~~G~~~~~~g~-~~~~~~~~~D~~a~~~~-l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~-----~p-~lf~ 661 (783)
.+|..-|.+|...-..... .........|+...++. +....-....++.|.|.|+||..+..++.. .+ =-++
T Consensus 98 fiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLk 177 (255)
T 1whs_A 98 FLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLK 177 (255)
T ss_dssp EECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred EEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccc
Confidence 8885433334321111111 01112234555555543 333322344689999999999988766532 12 2579
Q ss_pred EEEEcCCcchhhhc
Q psy2521 662 AALILVGALDMLRF 675 (783)
Q Consensus 662 a~i~~~~~~d~~~~ 675 (783)
+++...|++|....
T Consensus 178 Gi~ign~~~d~~~~ 191 (255)
T 1whs_A 178 GFMVGNGLIDDYHD 191 (255)
T ss_dssp EEEEEEECCBHHHH
T ss_pred eEEecCCccCHHHh
Confidence 99999999987653
|
| >3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.001 Score=68.63 Aligned_cols=95 Identities=11% Similarity=-0.047 Sum_probs=59.9
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
+..|.||++||..+.... |.. +...| .+.|+.+|+++.. ....++++.+.+..++..- .
T Consensus 22 ~~~~~l~~~hg~~~~~~~--~~~-~~~~L---~~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~-~ 80 (283)
T 3tjm_A 22 SSERPLFLVHPIEGSTTV--FHS-LASRL---SIPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-Q 80 (283)
T ss_dssp SSSCCEEEECCTTCCSGG--GHH-HHHHC---SSCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTT-C
T ss_pred CCCCeEEEECCCCCCHHH--HHH-HHHhc---CceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHh-C
Confidence 456778999998775533 332 22333 3889999986421 1123555555444444331 1
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcC---CCcee---EEEEcCC
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQR---PELYG---AALILVG 668 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~---p~lf~---a~i~~~~ 668 (783)
..+++.++|||+||.++..++.+. |+... .++...+
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 225799999999999999888754 77776 6666544
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.12 Score=56.48 Aligned_cols=159 Identities=10% Similarity=0.109 Sum_probs=89.1
Q ss_pred EeeEEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
-.+++++| ++.. +|..+.. ..|+++|++++.............+++|+++|+.||.+..... .
T Consensus 139 P~~lavdp~~~g~-Lyv~d~~----~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~-----------~ 202 (430)
T 3tc9_A 139 AVWLSFDPKNHNH-LYLVGEQ----HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN-----------N 202 (430)
T ss_dssp CCEEEEETTEEEE-EEEEEBT----EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC-----------T
T ss_pred CCEEEECCCCCCe-EEEEeCC----CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC-----------c
Confidence 45688998 4555 4555543 6799999998875433222223357999999998887763210 1
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP- 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~- 368 (783)
....++.............+.. ...+ .++.++|++.+|++... ...+|+.++.+++. ...+..
T Consensus 203 ~~~~v~~~~~~g~~~~~~~l~~-~~~p---~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~---------~~~~~~~ 266 (430)
T 3tc9_A 203 DRPNNYILTRESGFKVITELTK-GQNC---NGAETHPINGELYFNSW---NAGQVFRYDFTTQE---------TTPLFTI 266 (430)
T ss_dssp TSEEEEEEEGGGTSCSEEEEEE-CSSC---CCEEECTTTCCEEEEET---TTTEEEEEETTTTE---------EEEEEEC
T ss_pred ccceEEEEeCCCceeeeeeecc-CCCc---eEEEEeCCCCEEEEEEC---CCCEEEEEECCCCc---------EEEEEEc
Confidence 1123443333222111112221 1222 35778996556665532 23689999998631 111111
Q ss_pred -Ccc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 369 -GMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 369 -~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
... ...-.++++|++||+... .+.+|++++.++
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~---~~~~I~~~~~d~ 301 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVV---NQHYILRSDYDW 301 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEET---TTTEEEEEEEET
T ss_pred CCCCcceeEEEcCCCCEEEEEEC---CCCEEEEEeCCc
Confidence 111 112258999998888643 345788887764
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0038 Score=66.83 Aligned_cols=126 Identities=11% Similarity=0.060 Sum_probs=67.7
Q ss_pred ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee---eecC-cccee--EEEEeeCCEEEEEECCC-C----C
Q psy2521 325 TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT---VIPG-MDHHH--EIIANNGPELIVKTTKN-A----P 393 (783)
Q Consensus 325 SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~---l~~~-~~~~~--~~~s~dg~~l~~~t~~~-~----~ 393 (783)
+++++.+++... +.++++|+.++ ...+....+... ...+ ...++ -.+++||+++|+..+.. + .
T Consensus 219 ~~~~~~~~~vs~-----~~V~viD~~~~-~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~ 292 (368)
T 1mda_H 219 ANYPGMLVWAVA-----SSILQGDIPAA-GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292 (368)
T ss_dssp ETTTTEEEECBS-----SCCEEEECCSS-CCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred cccCCEEEEEcC-----CEEEEEECCCC-cceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc
Confidence 788888776643 57899998752 111100111000 0000 01111 24899999999865411 1 0
Q ss_pred CceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 394 KGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 394 ~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
...+..+|+++.+ ...-++-+ .. -..+.+ .+++++++.... +...|.++|+++++.+..|+..
T Consensus 293 ~~~~~ViD~~t~~---vv~~i~vg-~~-p~gi~~s~Dg~~l~va~~~-~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 293 AENTSSVTASVGQ---TSGPISNG-HD-SDAIIAAQDGASDNYANSA-GTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEEEEEESSSCC---EEECCEEE-EE-ECEEEECCSSSCEEEEEET-TTTEEEEEESSSCEEEEECCCC
T ss_pred CCCEEEEECCCCe---EEEEEECC-CC-cceEEECCCCCEEEEEccC-CCCeEEEEECCCCcEEEEEECC
Confidence 1236699988754 22222222 11 223333 444557766551 1357999999999988888754
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.044 Score=55.16 Aligned_cols=201 Identities=12% Similarity=0.103 Sum_probs=109.0
Q ss_pred cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEe
Q psy2521 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTS 336 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~ 336 (783)
.++++|.||+++||.+... +..|+..++. +.....+-+.... -.-++++.++|++++ . .
T Consensus 29 lSGla~~~~~~~L~aV~d~---------------~~~I~~ld~~-g~v~~~i~l~g~~---D~EGIa~~~~g~~~v-s-~ 87 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK---------------PAAIVEMTTN-GDLIRTIPLDFVK---DLETIEYIGDNQFVI-S-D 87 (255)
T ss_dssp EEEEEEETTTTEEEEEEET---------------TEEEEEEETT-CCEEEEEECSSCS---SEEEEEECSTTEEEE-E-E
T ss_pred cceeEEeCCCCEEEEEECC---------------CCeEEEEeCC-CCEEEEEecCCCC---ChHHeEEeCCCEEEE-E-E
Confidence 4799999999888877621 3468877765 2111111111111 235788889997544 2 2
Q ss_pred cCCCCcEEEEEECCCCCCCcccCCCCcee--e-ecCccceeE--EEEeeCCEEEEEECCCCCCceEEEEcC--CCCCCCC
Q psy2521 337 NNTQGSDLHYFDLHSLPDGKISGKFPLKT--V-IPGMDHHHE--IIANNGPELIVKTTKNAPKGKVVTINL--NNPCEKN 409 (783)
Q Consensus 337 ~~~~~~~l~~~dl~~g~~~~l~~~~~~~~--l-~~~~~~~~~--~~s~dg~~l~~~t~~~~~~~~L~~~d~--~~~~~~~ 409 (783)
++ ...++++++... . .+. ...... + ......+.+ .|++++++||+...++ ...||.++- .+. .
T Consensus 88 E~--~~~l~~~~v~~~-~-~i~-~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~g~~~~~---~ 157 (255)
T 3qqz_A 88 ER--DYAIYVISLTPN-S-EVK-ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVNGLLSSN---E 157 (255)
T ss_dssp TT--TTEEEEEEECTT-C-CEE-EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEESTTCSS---C
T ss_pred CC--CCcEEEEEcCCC-C-eee-eeeeeccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEcccccCC---c
Confidence 22 268888887652 1 110 000000 1 011223333 5889999999876654 346888871 111 1
Q ss_pred cEEee----c-CCCCceEEEEEEee-CCEEEEEEecCCeeEEEEEECCCCceeeeecCCCe---------EEEeeecccc
Q psy2521 410 WKTLI----P-EDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLG---------QITHISGRRK 474 (783)
Q Consensus 410 ~~~li----~-~~~~~~l~~~~~~~-g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g---------~v~~~s~~~d 474 (783)
.+.+- . ...-..++++.... .+++++.+... ..|..+|+ +|+.+..+.+..| ...++..+++
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~ 234 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--RALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS 234 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--TEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTT
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCC--CeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCC
Confidence 22210 0 00011123333322 25777766544 57888888 6876666655421 3466777777
Q ss_pred ccEEEEEEecCCCCceEEEEeC
Q psy2521 475 YNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 475 ~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++ +|++ ..|..+|++..
T Consensus 235 G~-lyIv----sE~n~~y~f~~ 251 (255)
T 3qqz_A 235 GN-IYIV----SEPNRFYRFTP 251 (255)
T ss_dssp CC-EEEE----ETTTEEEEEEC
T ss_pred CC-EEEE----cCCceEEEEEe
Confidence 74 7765 25668998865
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.013 Score=61.05 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=36.1
Q ss_pred EEeeEEECC--CCcEEEEEEecCCCceEEEEEEECCCCcccc-ccc--cccccCeeEEeeC--CCEEEE
Q psy2521 210 ALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVL--KNVKFPSISWTHD--HKGFFY 271 (783)
Q Consensus 210 ~l~~~~~SP--DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~--~~~~~~~~~WspD--g~~l~y 271 (783)
.+..++||| +|++|+-+.. + .+|++||+.+++... .+. .......++|+|| |+.|+-
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~-D----~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSY-D----RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEET-T----SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE
T ss_pred cEEEEEeCCCCCCCEEEEEEC-C----CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE
Confidence 477889987 4887775432 2 469999999875322 111 2223468999998 554443
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.019 Score=60.24 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=65.7
Q ss_pred CCceEEEEEEECCCCccccccccc---c-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc
Q psy2521 231 GSDWNTLHIKDVDTGKDYPEVLKN---V-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD 306 (783)
Q Consensus 231 G~d~~~i~v~Dl~tg~~~~~~~~~---~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d 306 (783)
|+...+|+|||+++|+.+.....+ . .....+|||||+.++....+... .. .........+..++..++..-.
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~-w~---laSGs~D~tIklWd~~tgk~l~ 274 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK-ES---ESLRSPVFQLIVINPKTTLSVG 274 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------------CCEEEEEEETTTTEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc-ce---eeccCCCcEEEEEECCCCEEEE
Confidence 445578999999999865422111 1 11245899999887655432110 00 0011234566777766542111
Q ss_pred eeEEecCCCC-eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEEeeCCE
Q psy2521 307 IPVVEFPNGR-SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIANNGPE 383 (783)
Q Consensus 307 ~~v~~~~~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s~dg~~ 383 (783)
++.+..++.. ..+..... +|..++-.+ ....|.++|+.+|.. ...+......... .|+|||+.
T Consensus 275 v~~~~~p~Gh~~~~lsg~~--sg~~lASgS----~DgTIkIWDl~tGk~--------l~tL~gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 275 VMLYCLPPGQAGRFLEGDV--KDHCAAAIL----TSGTIAIWDLLLGQC--------TALLPPVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp EEEECCCTTCCCCEEEEEE--ETTEEEEEE----TTSCEEEEETTTCSE--------EEEECCC--CCCCEEEECSSSSE
T ss_pred EEEeeccCCCcceeEcccc--CCCEEEEEc----CCCcEEEEECCCCcE--------EEEecCCCCCeEEEEEECCCCCE
Confidence 1111112111 11222222 255554222 225799999988521 1222222222222 59999987
Q ss_pred EEEE
Q psy2521 384 LIVK 387 (783)
Q Consensus 384 l~~~ 387 (783)
|+--
T Consensus 341 LaSG 344 (356)
T 2w18_A 341 LLAG 344 (356)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7743
|
| >1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0026 Score=69.94 Aligned_cols=142 Identities=11% Similarity=0.118 Sum_probs=79.3
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHH----------------HHHHHHcCCEEE
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS----------------RCMFLRHFNGIY 588 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~----------------~~~~l~~~G~~v 588 (783)
....=.++-.++..+..+++...+ .....|+||++|||||.+....+..+ -..|.. -..+
T Consensus 20 ~~~sGyv~v~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~~--~~~~ 95 (452)
T 1ivy_A 20 RQYSGYLKSSGSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNL--IANV 95 (452)
T ss_dssp CEEEEEEECSTTEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGG--SSEE
T ss_pred eeeEEEEeeCCCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCcccc--cccE
Confidence 333334444557778777665432 23468999999999997643211000 012222 4678
Q ss_pred EEecC-CCCCCCChhHHhhc-cccCCcChHHHHHH-HHHHHHHcCCCCCCcEEEEEeChhHHHHHH----HHhcCCCcee
Q psy2521 589 AIPNI-RGGGELGEDWHNAG-RLLKKQNCFDDFQA-AAEYMINKKYTKPKYITIMGGSNGGLLVGA----CLNQRPELYG 661 (783)
Q Consensus 589 ~~~~~-RG~g~~G~~~~~~g-~~~~~~~~~~D~~a-~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~----~~~~~p~lf~ 661 (783)
+.+|. +|.| |... ... .........+|+.. ..+|+....-....++.|.|.|+||..+.. ++...+--++
T Consensus 96 lfiDqP~GtG-fS~~--~~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~ 172 (452)
T 1ivy_A 96 LYLESPAGVG-FSYS--DDKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQ 172 (452)
T ss_dssp EEECCSTTST-TCEE--SSCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEE
T ss_pred EEEecCCCCC-cCCc--CCCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccc
Confidence 88895 6633 3311 110 00011122344433 344554432234468999999999995444 4433355689
Q ss_pred EEEEcCCcchhh
Q psy2521 662 AALILVGALDML 673 (783)
Q Consensus 662 a~i~~~~~~d~~ 673 (783)
+++...|++|..
T Consensus 173 g~~ign~~~d~~ 184 (452)
T 1ivy_A 173 GLAVGNGLSSYE 184 (452)
T ss_dssp EEEEESCCSBHH
T ss_pred eEEecCCccChh
Confidence 999999988754
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.033 Score=61.05 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=74.0
Q ss_pred EEEeeEEECCC-CcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 209 TALKLYAFSDN-GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 209 ~~l~~~~~SPD-G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
..+..++|+|+ +++||-+.. + .+|++||+.++........ ......++|+|||+.|+....+
T Consensus 150 ~~V~~v~~~p~~~~~las~s~-D----g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d----------- 213 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLA-D----GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN----------- 213 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEET-T----SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT-----------
T ss_pred CceEEEEECCCCCCEEEEEEC-C----CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC-----------
Confidence 34788999998 676665443 3 3599999998854322221 2234689999999988876622
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecC-----CCCeeEEEEEEecCCcEEEEEEecCCC---CcEEEEEECCC
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFP-----NGRSLGLHSEVTDCGRYLLVSTSNNTQ---GSDLHYFDLHS 351 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~-----~~~~~~~~~~~SpDGk~l~~~~~~~~~---~~~l~~~dl~~ 351 (783)
..|.++++. .. ....+..+ ++......+.|++++.+++........ ...+.++++..
T Consensus 214 -----g~v~iwd~~-~~--~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 214 -----GTVVQYLPT-LQ--EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp -----SCEEEECTT-CC--EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred -----CcEEEEccC-Cc--ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 246677665 11 11122211 112245689999999998776544211 25688888865
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.2 Score=54.36 Aligned_cols=234 Identities=13% Similarity=0.079 Sum_probs=117.4
Q ss_pred CceEEEEEEECCC-----Ccccccc-cc--ccccCeeEE-----------e--eCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 232 SDWNTLHIKDVDT-----GKDYPEV-LK--NVKFPSISW-----------T--HDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 232 ~d~~~i~v~Dl~t-----g~~~~~~-~~--~~~~~~~~W-----------s--pDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
...-.|-++|++. |+++... .. +-....+.| + +|+++|+... .+
T Consensus 40 ~~~d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~---------------l~ 104 (462)
T 2ece_A 40 NRADFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPG---------------LR 104 (462)
T ss_dssp CCCCEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEB---------------TT
T ss_pred CCCCeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEcc---------------CC
Confidence 3345688899886 5543321 11 112245677 7 8888777655 23
Q ss_pred CceEEEEEcCCCCCCceeEEecC-------CCCeeEEEEEEecCCcEEEEEEecC---CCCcEEEEEECCCCCCCcccCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFP-------NGRSLGLHSEVTDCGRYLLVSTSNN---TQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~-------~~~~~~~~~~~SpDGk~l~~~~~~~---~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
..+|++.++.+...+..++-... -+...-..+..+||| |+++.... .....+.++|.++++ +
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~---v--- 176 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFE---P--- 176 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCC---E---
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCe---E---
Confidence 45799999876654433322110 011122356789999 55544321 223789999998742 1
Q ss_pred CCceeeecC-ccc--eeE-EEEeeCCEEEEEECCC----------------CCCceEEEEcCCCCCCCCcEEeecCCCC-
Q psy2521 361 FPLKTVIPG-MDH--HHE-IIANNGPELIVKTTKN----------------APKGKVVTINLNNPCEKNWKTLIPEDEN- 419 (783)
Q Consensus 361 ~~~~~l~~~-~~~--~~~-~~s~dg~~l~~~t~~~----------------~~~~~L~~~d~~~~~~~~~~~li~~~~~- 419 (783)
......+ ... .|. .|+|+++.++ .++-. ....+|..+|+++.+ ....++-+..
T Consensus 177 --~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k---~~~tI~vg~~g 250 (462)
T 2ece_A 177 --LGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK---RIHSLTLGEEN 250 (462)
T ss_dssp --EEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE---EEEEEESCTTE
T ss_pred --EEEEccCCCCccccceEEECCCCCEEE-EccCcCccccccccchhhhhhccCCEEEEEECCCCc---EeeEEecCCCC
Confidence 1111111 111 233 3789988544 45411 124579999997643 2222332211
Q ss_pred ceEEEE---EEeeCCEEEEEEe---cCCeeEEEEEECCCCce--eeeec---------CC---------CeEEEeeeccc
Q psy2521 420 RTLDVV---AAVANNKLIVHYI---QNVRSVMDLHDLNTGKR--LHSFP---------LD---------LGQITHISGRR 473 (783)
Q Consensus 420 ~~l~~~---~~~~g~~l~~~~~---~~g~~~l~~~dl~~G~~--~~~l~---------~~---------~g~v~~~s~~~ 473 (783)
..-..+ ...+++++|+... .+-.+.|+++..++|+. ...|. +| ......+..++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 111111 1234445555444 12224555444323321 11111 11 01234556788
Q ss_pred cccEEEEEEecCCCCceEEEEeCC
Q psy2521 474 KYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 474 d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
|++.||++-..- ..|..||+.
T Consensus 331 DGrfLYVSnrg~---d~VavfdV~ 351 (462)
T 2ece_A 331 DDKFLYLSLWGI---GEVRQYDIS 351 (462)
T ss_dssp TSCEEEEEETTT---TEEEEEECS
T ss_pred CCCEEEEEeCCC---CEEEEEEec
Confidence 998888765433 578888883
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.58 Score=53.68 Aligned_cols=223 Identities=11% Similarity=0.119 Sum_probs=127.3
Q ss_pred cEEEEEEecCCCceEEEEEEECCCCcccc-cccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEE
Q psy2521 221 KHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 298 (783)
Q Consensus 221 ~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~ 298 (783)
.+|.|+.. ..|+.+|+++..... ..+.+. ...+++|.+++..||++.. ...+|++..
T Consensus 7 ~~Ll~s~~------~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~---------------~~~~I~r~~ 65 (628)
T 4a0p_A 7 AFLLFSRR------ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI---------------SLKTISRAF 65 (628)
T ss_dssp CEEEEEET------TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET---------------TTTEEEEEE
T ss_pred cEEEEEeC------CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC---------------CCCeEEEEE
Confidence 35777632 468999998765321 112221 2247899999888988862 234788888
Q ss_pred cCCCCCCceeEEecC-CCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee-cCccceeE-
Q psy2521 299 LGTEQDKDIPVVEFP-NGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI-PGMDHHHE- 375 (783)
Q Consensus 299 lgt~~~~d~~v~~~~-~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~-~~~~~~~~- 375 (783)
+..... ..+.... ..+ .++++.+.++.|++... ....|.++++++.. ...+. .....-..
T Consensus 66 ~~g~~~--~~v~~~g~~~P---~GlAvD~~~~~LY~tD~---~~~~I~v~~~dG~~---------~~~l~~~~l~~P~~i 128 (628)
T 4a0p_A 66 MNGSAL--EHVVEFGLDYP---EGMAVDWLGKNLYWADT---GTNRIEVSKLDGQH---------RQVLVWKDLDSPRAL 128 (628)
T ss_dssp TTSCSC--EEEECSSCSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSTT---------CEEEECSSCCCEEEE
T ss_pred CCCCCc--EEEEeCCCCCc---ceEEEEeCCCEEEEEEC---CCCEEEEEecCCCc---------EEEEEeCCCCCcccE
Confidence 765422 2333321 223 36788888888877643 33789999998721 12233 22221122
Q ss_pred EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee-CCEEEEEEecCCeeEEEEEECCCCc
Q psy2521 376 IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 376 ~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~-g~~l~~~~~~~g~~~l~~~dl~~G~ 454 (783)
.++|..+.||+. +.+ .+.+|+++++++.. .+.++.. -..-.++.+.. ++.||+..... ..|+++++ +|.
T Consensus 129 avdp~~G~lY~t-D~g-~~~~I~r~~~dG~~---~~~l~~~--~~~P~GlalD~~~~~LY~aD~~~--~~I~~~d~-dG~ 198 (628)
T 4a0p_A 129 ALDPAEGFMYWT-EWG-GKPKIDRAAMDGSE---RTTLVPN--VGRANGLTIDYAKRRLYWTDLDT--NLIESSNM-LGL 198 (628)
T ss_dssp EEETTTTEEEEE-ECS-SSCEEEEEETTSCS---CEEEECS--CSSEEEEEEETTTTEEEEEETTT--TEEEEEET-TSC
T ss_pred EEccCCCeEEEe-CCC-CCCEEEEEeCCCCc---eEEEECC--CCCcceEEEccccCEEEEEECCC--CEEEEEcC-CCC
Confidence 477777788875 332 25689999998765 3555542 22234455442 47888876543 57999999 565
Q ss_pred eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 455 RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 455 ~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..+.+........++.. +++.+|++= + .-..|+++|.
T Consensus 199 ~~~v~~~~l~~P~glav--~~~~ly~tD--~-~~~~I~~~dk 235 (628)
T 4a0p_A 199 NREVIADDLPHPFGLTQ--YQDYIYWTD--W-SRRSIERANK 235 (628)
T ss_dssp SCEEEEECCSCEEEEEE--ETTEEEEEE--T-TTTEEEEEET
T ss_pred ceEEeeccCCCceEEEE--ECCEEEEec--C-CCCEEEEEEC
Confidence 43322211111113322 235666543 2 2357888886
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.11 Score=52.21 Aligned_cols=192 Identities=9% Similarity=0.037 Sum_probs=102.2
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
.++.++ |+.|..+....| +|+++|++||+.+...+.... .+..-+++|++||... +..
T Consensus 58 qGL~~~--~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~l~~~~-FgeGit~~g~~Ly~lt---------------w~~ 115 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQG----TLRQLSLESAQPVWMERLGNI-FAEGLASDGERLYQLT---------------WTE 115 (268)
T ss_dssp EEEEEE--TTEEEEEETTTT----EEEECCSSCSSCSEEEECTTC-CEEEEEECSSCEEEEE---------------SSS
T ss_pred ceEEEE--CCEEEEEcCCCC----EEEEEECCCCcEEeEECCCCc-ceeEEEEeCCEEEEEE---------------ccC
Confidence 456665 466655543333 399999999998764433222 2333466888887765 345
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee---c
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---P 368 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~ 368 (783)
..++.++..+..... -+.-+.+ +...++||++|+.+. + .++|+++|.++.. + ...+. .
T Consensus 116 ~~v~V~D~~Tl~~~~--ti~~~~e-----GwGLt~Dg~~L~vSd--G--s~~l~~iDp~T~~---v-----~~~I~V~~~ 176 (268)
T 3nok_A 116 GLLFTWSGMPPQRER--TTRYSGE-----GWGLCYWNGKLVRSD--G--GTMLTFHEPDGFA---L-----VGAVQVKLR 176 (268)
T ss_dssp CEEEEEETTTTEEEE--EEECSSC-----CCCEEEETTEEEEEC--S--SSEEEEECTTTCC---E-----EEEEECEET
T ss_pred CEEEEEECCcCcEEE--EEeCCCc-----eeEEecCCCEEEEEC--C--CCEEEEEcCCCCe---E-----EEEEEeCCC
Confidence 578888887643211 1222211 234568999887652 2 4799999988731 1 11111 1
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee---c------CCCCceEEEEEEee-CCEEEEEE
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI---P------EDENRTLDVVAAVA-NNKLIVHY 437 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li---~------~~~~~~l~~~~~~~-g~~l~~~~ 437 (783)
+..... .-....+++||..... ...|.++|.++++...+-.+- + .....++.++.... ++.|+++.
T Consensus 177 g~~v~~lNeLe~~dG~lyanvw~---s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECANGVIYANIWH---SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEETTEEEEEETT---CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEeCCEEEEEECC---CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 111100 0011224478754432 237999999887632222221 1 11245777777654 35565543
Q ss_pred ecCCeeEEEEEE
Q psy2521 438 IQNVRSVMDLHD 449 (783)
Q Consensus 438 ~~~g~~~l~~~d 449 (783)
.. .++++.+.
T Consensus 254 K~--Wp~~~ev~ 263 (268)
T 3nok_A 254 KL--WPRLFEVR 263 (268)
T ss_dssp TT--CSEEEEEE
T ss_pred CC--CCceEEEE
Confidence 21 34455443
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=96.84 E-value=0.26 Score=51.68 Aligned_cols=141 Identities=10% Similarity=0.027 Sum_probs=66.7
Q ss_pred CCceEEEEEcCCCCCCceeEEecCCC-CeeEEEEEEecCCcEEEEEEe--------cCCCCcEEEEEECCCCCCCcccCC
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEFPNG-RSLGLHSEVTDCGRYLLVSTS--------NNTQGSDLHYFDLHSLPDGKISGK 360 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~~~~-~~~~~~~~~SpDGk~l~~~~~--------~~~~~~~l~~~dl~~g~~~~l~~~ 360 (783)
.+..|.++++.+++. +..+...+. .......++||||+.++.... .+.....|.++|..+|. .
T Consensus 201 ~D~TIkIWDl~TGk~--l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk--~---- 272 (356)
T 2w18_A 201 IMNNIVIWNLKTGQL--LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL--S---- 272 (356)
T ss_dssp TTSEEEEEETTTCCE--EEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE--E----
T ss_pred CCCcEEEEECCCCcE--EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE--E----
Confidence 345788999987642 222332111 112235679999998875432 12233677778887641 0
Q ss_pred CCceeee----cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEE-EEEeeCCEEEE
Q psy2521 361 FPLKTVI----PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDV-VAAVANNKLIV 435 (783)
Q Consensus 361 ~~~~~l~----~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~-~~~~~g~~l~~ 435 (783)
...+. .+........+.++..+. .... ...|..+|+.+++ ...++..+. ..+... .+.++ +.+++
T Consensus 273 --l~v~~~~~p~Gh~~~~lsg~~sg~~lA-SgS~---DgTIkIWDl~tGk--~l~tL~gH~-~~vvs~vafSPD-G~~La 342 (356)
T 2w18_A 273 --VGVMLYCLPPGQAGRFLEGDVKDHCAA-AILT---SGTIAIWDLLLGQ--CTALLPPVS-DQHWSFVKWSGT-DSHLL 342 (356)
T ss_dssp --EEEEEECCCTTCCCCEEEEEEETTEEE-EEET---TSCEEEEETTTCS--EEEEECCC---CCCCEEEECSS-SSEEE
T ss_pred --EEEEEeeccCCCcceeEccccCCCEEE-EEcC---CCcEEEEECCCCc--EEEEecCCC-CCeEEEEEECCC-CCEEE
Confidence 01110 111111111122233333 2222 2458889998765 123343333 333333 34455 56666
Q ss_pred EEecCCeeEEEEEEC
Q psy2521 436 HYIQNVRSVMDLHDL 450 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl 450 (783)
+...|+ .|++||+
T Consensus 343 SGS~D~--TIklWd~ 355 (356)
T 2w18_A 343 AGQKDG--NIFVYHY 355 (356)
T ss_dssp EECTTS--CEEEEEE
T ss_pred EEECCC--cEEEecC
Confidence 666664 5666664
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0049 Score=72.13 Aligned_cols=207 Identities=8% Similarity=0.043 Sum_probs=114.4
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCC----Cccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT----GKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t----g~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.++.|++++.+|.|+ +..+ ..|+++++.+ .......... ....++++.+.++.||++..
T Consensus 409 ~gla~d~~~~~Ly~s-D~~~---~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~------------ 472 (699)
T 1n7d_A 409 VALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS------------ 472 (699)
T ss_dssp CCCEEETTTTEEEEC-CTTT---TSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCT------------
T ss_pred EEEccccccCeEEEE-ecCC---CeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEec------------
Confidence 467889988877654 3322 3588899876 2222111111 12246777666777776541
Q ss_pred cccCCceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
....|++.++.+.. ...+... ...+ .+++++|++++|+++... ....|+++++++. . ...
T Consensus 473 ---~~~~I~v~d~dg~~--~~~l~~~~~~~P---~giavDp~~g~ly~td~~--~~~~I~~~~~dG~-~--------~~~ 533 (699)
T 1n7d_A 473 ---VLGTVSVADTKGVK--RKTLFREQGSKP---RAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV-D--------IYS 533 (699)
T ss_dssp ---TTSCEEEEBSSSCC--EEEECCCSSCCC---CCEECCSSSSCCEECCCS--SSCCEEBCCSSSC-C--------CCE
T ss_pred ---cCCeEEEEecCCCc--eEEEEeCCCCCc---ceEEEccCCCcEEEcccC--CCCeEEEEeCCCC-C--------eeE
Confidence 12357777765432 1122221 1222 357889988888765321 2268888888762 1 111
Q ss_pred eec-Ccc-ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIP-GMD-HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~-~~~-~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
++. ... ..-..|++++++||+.-. .+.+|.++++++.. .+.++.... .....++.+.. +.||++... .
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~-~~lywtd~~--~ 604 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII--N 604 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEET-TEEEEECST--T
T ss_pred EEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEEC-CEEEEEeCC--C
Confidence 211 111 111248888899998643 35679999998644 344543211 11112344444 788877643 3
Q ss_pred eEEEEEECCCCceeeeecCC
Q psy2521 443 SVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l~~~ 462 (783)
.+|.+++..+|+.++.|..+
T Consensus 605 ~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 605 EAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp TCEEEEETTTEEEEECCCTT
T ss_pred CeEEEEEccCCCceEEeecC
Confidence 57899998778876666543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.52 Score=47.49 Aligned_cols=228 Identities=14% Similarity=0.092 Sum_probs=118.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
...++.+++||+.+ + .+..+ ..|+++|.+ |+....... .....++++.++|+ ++++..
T Consensus 63 ~~~~i~~~~~g~l~-v-~~~~~---~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGDIW-F-TENGA---NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQL------------- 122 (300)
T ss_dssp CEEEEEECTTSCEE-E-EETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEET-------------
T ss_pred cceeEEECCCCCEE-E-EecCC---CeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEcc-------------
Confidence 36678899999833 3 33211 358899987 654322221 12235677888775 655541
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....|++.+.. . ....+..+........+.+++||+ |.+.. . ....|+.++.++ . .....
T Consensus 123 --~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~-~--~~~~i~~~~~~g-~---------~~~~~ 182 (300)
T 2qc5_A 123 --NGDRIGKLTAD-G---TIYEYDLPNKGSYPAFITLGSDNA-LWFTE-N--QNNSIGRITNTG-K---------LEEYP 182 (300)
T ss_dssp --TTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTSS-EEEEE-T--TTTEEEEECTTC-C---------EEEEE
T ss_pred --CCCeEEEECCC-C---CEEEccCCCCCCCceeEEECCCCC-EEEEe-c--CCCeEEEECCCC-c---------EEEee
Confidence 12357666553 1 112222221112345778899998 44432 2 236899998843 1 11111
Q ss_pred c--CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEe-ecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 368 P--GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTL-IPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 368 ~--~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~l-i~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
. ....... .++++| .||+.+.. ...|++++.+ +. +... ++.. ......+....++.|++.... ..
T Consensus 183 ~~~~~~~~~~i~~d~~g-~l~v~~~~---~~~i~~~~~~-g~---~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~--~~ 251 (300)
T 2qc5_A 183 LPTNAAAPVGITSGNDG-ALWFVEIM---GNKIGRITTT-GE---ISEYDIPTP-NARPHAITAGKNSEIWFTEWG--AN 251 (300)
T ss_dssp CSSTTCCEEEEEECTTS-SEEEEETT---TTEEEEECTT-CC---EEEEECSST-TCCEEEEEECSTTCEEEEETT--TT
T ss_pred CCCCCCCcceEEECCCC-CEEEEccC---CCEEEEEcCC-Cc---EEEEECCCC-CCCceEEEECCCCCEEEeccC--CC
Confidence 1 1111112 356665 57775543 3469999983 33 2333 2222 233344555544667776543 24
Q ss_pred EEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 444 VMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.|.++++ +|+. ..+..+ ...+.++..++++. +++. +. . .++++|+
T Consensus 252 ~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~--~~-~--~i~~~~p 298 (300)
T 2qc5_A 252 QIGRITN-DNTI-QEYQLQTENAEPHGITFGKDGS-VWFA--LK-C--KIGKLNL 298 (300)
T ss_dssp EEEEECT-TSCE-EEEECCSTTCCCCCEEECTTSC-EEEE--CS-S--EEEEEEE
T ss_pred eEEEECC-CCcE-EEEECCccCCccceeEeCCCCC-EEEE--cc-C--ceEEeCC
Confidence 6889998 6764 344333 22333444555553 5553 22 2 7888876
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.24 Score=54.12 Aligned_cols=159 Identities=8% Similarity=0.032 Sum_probs=85.8
Q ss_pred EeeEEECCC--CcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
-.+++|+|| +.. +|..+.. ..|+++|+++|+............+++|++||+ ||++.....
T Consensus 141 P~gvavd~~s~~g~-Lyv~D~~----~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~----------- 203 (433)
T 4hw6_A 141 IWRMMFDPNSNYDD-LYWVGQR----DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSS----------- 203 (433)
T ss_dssp CCEEEECTTTTTCE-EEEECBT----SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSC-----------
T ss_pred CceEEEccccCCCE-EEEEeCC----CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCC-----------
Confidence 457899995 343 4555543 469999998887654322222335889999999 766652110
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
.....++.............+ .....+ .+++++|++..|++... ....|+.++.++|.. ...+..
T Consensus 204 ~~~~gv~~~~~~~~~~~~~~~-~~~~~P---~giavd~~~G~lyv~d~---~~~~V~~~d~~~g~~--------~~~~~~ 268 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERLSL-CNARGA---KTCAVHPQNGKIYYTRY---HHAMISSYDPATGTL--------TEEEVM 268 (433)
T ss_dssp TTSEEEEEECGGGTTCCEEEE-EECSSB---CCCEECTTTCCEEECBT---TCSEEEEECTTTCCE--------EEEEEE
T ss_pred cccceEEEEECCCCeeccccc-cccCCC---CEEEEeCCCCeEEEEEC---CCCEEEEEECCCCeE--------EEEEec
Confidence 111224433332221111111 111112 35778895555655422 236899999875310 011111
Q ss_pred --Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCC
Q psy2521 369 --GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNN 404 (783)
Q Consensus 369 --~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~ 404 (783)
...... -.++++|++||+... .+.+|++++.+.
T Consensus 269 ~~~~~~~~~ia~dpdG~~LYvad~---~~~~I~~~~~d~ 304 (433)
T 4hw6_A 269 MDTKGSNFHIVWHPTGDWAYIIYN---GKHCIYRVDYNR 304 (433)
T ss_dssp CSCCSSCEEEEECTTSSEEEEEET---TTTEEEEEEBCT
T ss_pred cCCCCCcccEEEeCCCCEEEEEeC---CCCEEEEEeCCC
Confidence 111111 258999998988643 356799988763
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.59 Score=47.09 Aligned_cols=230 Identities=10% Similarity=0.040 Sum_probs=121.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..++.+++||+.. ..+..+ ..|.++|.. ++....... .....++++.++|+ |+++..
T Consensus 22 p~~i~~d~~g~l~--v~~~~~---~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 80 (300)
T 2qc5_A 22 PYGITSSEDGKVW--FTQHKA---NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTEN-------------- 80 (300)
T ss_dssp EEEEEECTTSCEE--EEETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred cceeeECCCCCEE--EEcCCC---CeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEec--------------
Confidence 5678889999833 233211 358889987 654432221 12234677887775 665541
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee-e
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV-I 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l-~ 367 (783)
....|++.+.. .. ...+..+.......++.++++|+..+ .. . ....|+.+|.++ . .... .
T Consensus 81 -~~~~v~~~d~~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~v-~~-~--~~~~i~~~~~~g-~---------~~~~~~ 141 (300)
T 2qc5_A 81 -GANKIGKLSKK-GG---FTEYPLPQPDSGPYGITEGLNGDIWF-TQ-L--NGDRIGKLTADG-T---------IYEYDL 141 (300)
T ss_dssp -TTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECSTTCEEE-EE-T--TTTEEEEECTTS-C---------EEEEEC
T ss_pred -CCCeEEEECCC-CC---eEEecCCCCCCCCccceECCCCCEEE-Ec-c--CCCeEEEECCCC-C---------EEEccC
Confidence 12357766654 21 12233221112345778889997443 32 1 235788888763 1 1111 1
Q ss_pred c-CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 P-GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 ~-~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
. ....... .++++|+ +|+.... ...|++++.+ +. ...+...........+....++.|++..... ..|
T Consensus 142 ~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~~-g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~--~~i 211 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNA-LWFTENQ---NNSIGRITNT-GK---LEEYPLPTNAAAPVGITSGNDGALWFVEIMG--NKI 211 (300)
T ss_dssp SSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECTT-CC---EEEEECSSTTCCEEEEEECTTSSEEEEETTT--TEE
T ss_pred CCCCCCceeEEECCCCC-EEEEecC---CCeEEEECCC-Cc---EEEeeCCCCCCCcceEEECCCCCEEEEccCC--CEE
Confidence 1 1111112 3667776 7765532 3469999983 33 3333222212333445554446777765433 368
Q ss_pred EEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++++. +|+.. .+..+ ...+.++..++++. ++++-.. ...++++|.
T Consensus 212 ~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~ 258 (300)
T 2qc5_A 212 GRITT-TGEIS-EYDIPTPNARPHAITAGKNSE-IWFTEWG---ANQIGRITN 258 (300)
T ss_dssp EEECT-TCCEE-EEECSSTTCCEEEEEECSTTC-EEEEETT---TTEEEEECT
T ss_pred EEEcC-CCcEE-EEECCCCCCCceEEEECCCCC-EEEeccC---CCeEEEECC
Confidence 99998 67653 33332 33445666666654 6655422 457889987
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.27 Score=56.41 Aligned_cols=218 Identities=11% Similarity=0.089 Sum_probs=116.9
Q ss_pred EEEEEEECCCCc-ccccccccc-ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEec
Q psy2521 235 NTLHIKDVDTGK-DYPEVLKNV-KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEF 312 (783)
Q Consensus 235 ~~i~v~Dl~tg~-~~~~~~~~~-~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~ 312 (783)
.+|+++|+++.. ......... ...+++|.+++..||++.. ...+|++..+.+... ...+...
T Consensus 18 ~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~---------------~~~~I~r~~~~g~~~-~~~v~~~ 81 (619)
T 3s94_A 18 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV---------------SEEAIKRTEFNKTES-VQNVVVS 81 (619)
T ss_dssp SBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET---------------TTTEEEEEEC------CEEEECS
T ss_pred ccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC---------------CCCeEEEEEccCCCc-eEEEEeC
Confidence 468899998753 111122211 2247899998888988862 234788888765421 1233332
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-CccceeE-EEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-GMDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
.- ..-.++++.+.++.|++... ....|.++++++.. .+.++. ....-.. .++|.++.||+.. .
T Consensus 82 ~~--~~P~GlAvD~~~~~ly~~d~---~~~~I~v~~~dG~~---------~~~l~~~~l~~P~~Iavdp~~g~ly~tD-~ 146 (619)
T 3s94_A 82 GL--LSPDGLACDWLGEKLYWTDS---ETNRIEVSNLDGSL---------RKVLFWQELDQPRAIALDPSSGFMYWTD-W 146 (619)
T ss_dssp SC--SCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---------CEEEECSSCSCCCCEEEETTTTEEEEEE-C
T ss_pred CC--CCcCeEEEEecCCEEEEEeC---CCCEEEEEECCCCC---------EEEEEeCCCCCCceEEEecCCCeEEEec-c
Confidence 21 12357888998888877642 23789999998721 122332 1111111 4778878888754 2
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEe
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITH 468 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~ 468 (783)
+ .+.+|++.++++.. .+.++... -..-.++.+. +++.||+.... ...|+++++ +|...+.+... .....+
T Consensus 147 g-~~~~I~r~~~dG~~---~~~l~~~~-~~~P~Glald~~~~~LY~aD~~--~~~I~~~~~-dG~~~~~~~~~~~~~P~g 218 (619)
T 3s94_A 147 G-EVPKIERAGMDGSS---RFIIINSE-IYWPNGLTLDYEEQKLYWADAK--LNFIHKSNL-DGTNRQAVVKGSLPHPFA 218 (619)
T ss_dssp S-SSCEEEEEETTSCS---CEEEECSS-CSSEEEEEEETTTTEEEEEETT--TCCEEEESS-SCCEEC---------CCC
T ss_pred C-CCCEEEEEECCCCc---eEEEEeCC-CCCCcEEEEEccCCEEEEEeCC--CCeEEEecC-CCCccEEEEeCCCCCceE
Confidence 2 24689999998755 35555433 2223455554 34788887544 367999999 67654443221 111112
Q ss_pred eeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 469 ISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 469 ~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.. +.+.+|++ .+. -.+|.++|.
T Consensus 219 i~~--~~~~ly~t--d~~-~~~V~~~d~ 241 (619)
T 3s94_A 219 LTL--FEDILYWT--DWS-THSILACNK 241 (619)
T ss_dssp EEE--SSSEEEEE--CTT-TCSEEEEES
T ss_pred EEE--eCCEEEEe--cCC-CCEEEEEEC
Confidence 222 23455543 333 346888887
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.69 Score=46.56 Aligned_cols=228 Identities=12% Similarity=0.081 Sum_probs=118.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..++.++|||+.+ ++ ...+ ..|+++|.+ |+...... ......++++.|||+ |+++..
T Consensus 59 ~~~i~~~~~g~l~-v~-~~~~---~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-------------- 117 (299)
T 2z2n_A 59 VMCLTISSDGEVW-FT-ENAA---NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGD-IWFTEM-------------- 117 (299)
T ss_dssp EEEEEECTTSCEE-EE-ETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEET--------------
T ss_pred eeeEEECCCCCEE-Ee-CCCC---CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCC-EEEEec--------------
Confidence 6678899999843 33 2211 358888876 44322211 112234677888774 665541
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee-e
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV-I 367 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l-~ 367 (783)
....|++++. +.. ...+..+.......++.+++||+..+ ... ....|+.+|. ++. .... .
T Consensus 118 -~~~~i~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v-~~~---~~~~i~~~~~-~g~---------~~~~~~ 178 (299)
T 2z2n_A 118 -NGNRIGRITD-DGK---IREYELPNKGSYPSFITLGSDNALWF-TEN---QNNAIGRITE-SGD---------ITEFKI 178 (299)
T ss_dssp -TTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSCEEE-EET---TTTEEEEECT-TCC---------EEEEEC
T ss_pred -CCceEEEECC-CCC---EEEecCCCCCCCCceEEEcCCCCEEE-EeC---CCCEEEEEcC-CCc---------EEEeeC
Confidence 1235777765 221 12222221122345778899996433 321 2368999998 431 1111 1
Q ss_pred -cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 368 -PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 368 -~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
........ .++++|. ||+.+.. ...|++++. ++. +..+...........+....++.|++....+ ..|
T Consensus 179 ~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~~~-~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i 248 (299)
T 2z2n_A 179 PTPASGPVGITKGNDDA-LWFVEII---GNKIGRITT-SGE---ITEFKIPTPNARPHAITAGAGIDLWFTEWGA--NKI 248 (299)
T ss_dssp SSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTT--TEE
T ss_pred CCCCCcceeEEECCCCC-EEEEccC---CceEEEECC-CCc---EEEEECCCCCCCceeEEECCCCCEEEeccCC--ceE
Confidence 11111112 3666655 7765532 346999998 443 3333222112334455555446677665332 468
Q ss_pred EEEECCCCceeeeecCC--CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++|+ +|+. ..+..+ ...+.++.. ++ ..+++.-+ ...++++|+
T Consensus 249 ~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~-g~l~v~~~----~~~l~~~~~ 293 (299)
T 2z2n_A 249 GRLTS-NNII-EEYPIQIKSAEPHGICF-DG-ETIWFAME----CDKIGKLTL 293 (299)
T ss_dssp EEEET-TTEE-EEEECSSSSCCEEEEEE-CS-SCEEEEET----TTEEEEEEE
T ss_pred EEECC-CCce-EEEeCCCCCCccceEEe-cC-CCEEEEec----CCcEEEEEc
Confidence 99998 6754 445433 233445555 33 45666542 257888887
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0057 Score=71.60 Aligned_cols=217 Identities=10% Similarity=0.020 Sum_probs=113.1
Q ss_pred EEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCC---CCCceeEEec
Q psy2521 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTE---QDKDIPVVEF 312 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~---~~~d~~v~~~ 312 (783)
.|+++++++++............+++|.+++..||++.. ...+|++.++.+. .....++...
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~---------------~~~~I~~~~~~g~~~~~~~~~~i~~~ 451 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---------------SQRMICSTQLDRAHGVSSYDTVISRD 451 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT---------------TTTSBEEEESCCCCC-CCCCCBCCSC
T ss_pred ceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec---------------CCCeEEEEecCCCCCCcceEEEEeCC
Confidence 588899988765433222223358999998888887752 1236777777641 1111111111
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-ccc-eeEEEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDH-HHEIIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~-~~~~~s~dg~~l~~~t~~ 390 (783)
...+ .++++.+.++.|++.. .....|+++++++.. ...++.. ... ..-.++|++++||+. +.
T Consensus 452 ~~~P---~glavD~~~g~LY~tD---~~~~~I~v~d~dg~~---------~~~l~~~~~~~P~giavDp~~g~ly~t-d~ 515 (699)
T 1n7d_A 452 IQAP---DGLAVDWIHSNIYWTD---SVLGTVSVADTKGVK---------RKTLFREQGSKPRAIVVDPVHGFMYWT-DW 515 (699)
T ss_dssp C--C---CCEECCCSSSBCEECC---TTTSCEEEEBSSSCC---------EEEECCCSSCCCCCEECCSSSSCCEEC-CC
T ss_pred CCCc---ceEEEEeeCCcEEEEe---ccCCeEEEEecCCCc---------eEEEEeCCCCCcceEEEccCCCcEEEc-cc
Confidence 1112 2466776677776542 223689999987621 1222221 111 111477777888864 32
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeecC-C--CeEE
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL-D--LGQI 466 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~-~--~g~v 466 (783)
. ...+|+++++++.. .+.++... -..-.++.+. +++.||++... ..+|+++++ +|...+.+.. + ....
T Consensus 516 ~-~~~~I~~~~~dG~~---~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~--~~~I~~~d~-dG~~~~~~~~~~~~~~~P 587 (699)
T 1n7d_A 516 G-TPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDV-NGGNRKTILEDEKRLAHP 587 (699)
T ss_dssp S-SSCCEEBCCSSSCC---CCEESCSS-CSSCCCEEECTTTCCEEEEETT--TTEEEEECS-SSSCCEEECCCSSSCSSC
T ss_pred C-CCCeEEEEeCCCCC---eeEEEeCC-CCCccEEEEeccCCEEEEEecC--CCeEEEEcc-CCCceEEEEecCCcCCCc
Confidence 2 23579999987644 23343332 1222344444 44778877643 368999999 5654344321 1 1111
Q ss_pred EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 467 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 467 ~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.++. .+++.+|++- + .-.+|+++|.
T Consensus 588 ~gla--vd~~~lywtd--~-~~~~V~~~d~ 612 (699)
T 1n7d_A 588 FSLA--VFEDKVFWTD--I-INEAIFSANR 612 (699)
T ss_dssp CCCE--EETTEEEEEC--S-TTTCEEEEET
T ss_pred eEeE--EECCEEEEEe--C-CCCeEEEEEc
Confidence 1222 2344555443 2 2357888886
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.94 Score=46.96 Aligned_cols=201 Identities=7% Similarity=0.006 Sum_probs=101.7
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--------c---cccCeeEEeeCCCEEEEEEeecCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--------N---VKFPSISWTHDHKGFFYNQYCDIN 278 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--------~---~~~~~~~WspDg~~l~y~~~~~~~ 278 (783)
...+++++|||+ .|..+... ..|+++|.++......++. . ....+++++|++..||++..
T Consensus 92 ~p~gia~d~~g~--l~v~d~~~---~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~---- 162 (329)
T 3fvz_A 92 LPHGLSIDTDGN--YWVTDVAL---HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG---- 162 (329)
T ss_dssp SEEEEEECTTSC--EEEEETTT---TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC----
T ss_pred CceEEEECCCCC--EEEEECCC---CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC----
Confidence 356789999999 34444322 4699999876531111111 0 02347899995556766651
Q ss_pred CCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCC------C--eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 279 GTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG------R--SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 279 ~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~------~--~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
.....|++++... .-...+..... . ..-.+++++||+..|++... ....|.+++.+
T Consensus 163 ----------~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~---~~~~I~~~~~~ 226 (329)
T 3fvz_A 163 ----------YCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR---ENGRIQCFKTD 226 (329)
T ss_dssp ----------SSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET---TTTEEEEEETT
T ss_pred ----------CCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC---CCCEEEEEECC
Confidence 1134566665321 11122211100 0 11357889999777766532 23689999998
Q ss_pred CCCCCcccCCCCceeee-cCcc-ceeE-EEEeeCCEEEEEECC----CCCCceEEEEcCCCCCCCCcEEeecC--CCCce
Q psy2521 351 SLPDGKISGKFPLKTVI-PGMD-HHHE-IIANNGPELIVKTTK----NAPKGKVVTINLNNPCEKNWKTLIPE--DENRT 421 (783)
Q Consensus 351 ~g~~~~l~~~~~~~~l~-~~~~-~~~~-~~s~dg~~l~~~t~~----~~~~~~L~~~d~~~~~~~~~~~li~~--~~~~~ 421 (783)
+|.. ...+. .... ..+. .++| ..++..... +..+..++.+++.++. ....+.. .....
T Consensus 227 ~G~~--------~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~---~~~~~~~~~~~~~~ 293 (329)
T 3fvz_A 227 TKEF--------VREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGE---IIDVFKPVRKHFDM 293 (329)
T ss_dssp TCCE--------EEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCC---EEEEECCSSSCCSS
T ss_pred CCcE--------EEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCe---EEEEEcCCCCccCC
Confidence 5310 11111 1111 1112 3555 233322211 1234578888877655 3333321 11222
Q ss_pred EEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 422 LDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 422 l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
...+.+..++.|+++...+ .+|++|++
T Consensus 294 p~~ia~~~dG~lyvad~~~--~~I~~~~~ 320 (329)
T 3fvz_A 294 PHDIVASEDGTVYIGDAHT--NTVWKFTL 320 (329)
T ss_dssp EEEEEECTTSEEEEEESSS--CCEEEEEE
T ss_pred eeEEEECCCCCEEEEECCC--CEEEEEeC
Confidence 3445555445777766544 47888877
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.23 Score=57.04 Aligned_cols=205 Identities=6% Similarity=0.031 Sum_probs=114.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
..++.+++++.+|.++ +..+ ..|+.+++++.......+ .+ ....+++..+.++.||++..
T Consensus 42 ~~~ld~~~~~~~ly~s-D~~~---~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~-------------- 103 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWS-DVSE---EAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDS-------------- 103 (619)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEET--------------
T ss_pred eEEEEEEeCCCEEEEE-ECCC---CeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeC--------------
Confidence 4567899988887665 4332 368888887763211111 11 12357888878888888762
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+|.+.++.+... .+++...-..| .++++.|.+.+|+++... ....|+..++++. . ...++.
T Consensus 104 -~~~~I~v~~~dG~~~-~~l~~~~l~~P---~~Iavdp~~g~ly~tD~g--~~~~I~r~~~dG~-~--------~~~l~~ 167 (619)
T 3s94_A 104 -ETNRIEVSNLDGSLR-KVLFWQELDQP---RAIALDPSSGFMYWTDWG--EVPKIERAGMDGS-S--------RFIIIN 167 (619)
T ss_dssp -TTTEEEEEETTSCSC-EEEECSSCSCC---CCEEEETTTTEEEEEECS--SSCEEEEEETTSC-S--------CEEEEC
T ss_pred -CCCEEEEEECCCCCE-EEEEeCCCCCC---ceEEEecCCCeEEEeccC--CCCEEEEEECCCC-c--------eEEEEe
Confidence 134688888765422 22222222333 367889998888887532 2468999998872 1 122332
Q ss_pred -CccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 -GMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 -~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
....-.. .+++++++||+.-. ....|.++++++... +.++....... .++.++. +.||++... ...|.
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~---~~~~I~~~~~dG~~~---~~~~~~~~~~P-~gi~~~~-~~ly~td~~--~~~V~ 237 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADA---KLNFIHKSNLDGTNR---QAVVKGSLPHP-FALTLFE-DILYWTDWS--THSIL 237 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEET---TTCCEEEESSSCCEE---C---------C-CCEEESS-SEEEEECTT--TCSEE
T ss_pred CCCCCCcEEEEEccCCEEEEEeC---CCCeEEEecCCCCcc---EEEEeCCCCCc-eEEEEeC-CEEEEecCC--CCEEE
Confidence 1111111 47788899998643 345799999987542 22332121122 2455555 677776543 35788
Q ss_pred EEECCCCceeeee
Q psy2521 447 LHDLNTGKRLHSF 459 (783)
Q Consensus 447 ~~dl~~G~~~~~l 459 (783)
++|..+|+....|
T Consensus 238 ~~d~~tg~~~~~i 250 (619)
T 3s94_A 238 ACNKYTGEGLREI 250 (619)
T ss_dssp EEESSSCCCCEEC
T ss_pred EEECCCCcccEEE
Confidence 8888777654433
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.14 Score=52.26 Aligned_cols=208 Identities=13% Similarity=0.065 Sum_probs=102.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-cc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc-
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT- 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~- 287 (783)
.....++|||+.|+ + . . ..++.+|. +|+.+-.. .. .....+..++|||+.|+-...... ....
T Consensus 39 ~~~~~~~pdG~ilv-s-~---~--~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~------~v~~v 104 (276)
T 3no2_A 39 CNSVAATKAGEILF-S-Y---S--KGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPS------TILEV 104 (276)
T ss_dssp CCEEEECTTSCEEE-E-C---B--SEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTE------EEEEE
T ss_pred CcCeEECCCCCEEE-e-C---C--CCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCC------EEEEE
Confidence 34678999999777 2 1 1 35899998 67654322 11 122346788999987654441000 0000
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
......++...+..... .+. .....+..++||++|+... ....|+.+|.+ |+ .-|..-.
T Consensus 105 d~~Gk~l~~~~~~~~~~-------~~~--~~~~~v~~~~~G~~lv~~~----~~~~v~~~d~~-G~-------~~w~~~~ 163 (276)
T 3no2_A 105 NMKGEVLSKTEFETGIE-------RPH--AQFRQINKNKKGNYLVPLF----ATSEVREIAPN-GQ-------LLNSVKL 163 (276)
T ss_dssp CTTSCEEEEEEECCSCS-------SGG--GSCSCCEECTTSCEEEEET----TTTEEEEECTT-SC-------EEEEEEC
T ss_pred eCCCCEEEEEeccCCCC-------ccc--ccccCceECCCCCEEEEec----CCCEEEEECCC-CC-------EEEEEEC
Confidence 00111233333221100 000 0112356789999876431 33689999987 42 1122111
Q ss_pred cCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC---ceEEEEEEeeCCEEEEEEecC----
Q psy2521 368 PGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN---RTLDVVAAVANNKLIVHYIQN---- 440 (783)
Q Consensus 368 ~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~---~~l~~~~~~~g~~l~~~~~~~---- 440 (783)
...... ....++|+.++ .... +.+|+.+|.++++ ..|+.-..+.+. ....+.....++.+++.....
T Consensus 164 ~~~~~~-~~~~~~g~~~v-~~~~---~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~ 237 (276)
T 3no2_A 164 SGTPFS-SAFLDNGDCLV-ACGD---AHCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDRE 237 (276)
T ss_dssp SSCCCE-EEECTTSCEEE-ECBT---TSEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTT
T ss_pred CCCccc-eeEcCCCCEEE-EeCC---CCeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccc
Confidence 111111 13556666544 3322 3579999998654 124322211111 113344444446677666422
Q ss_pred ----CeeEEEEEECCCCceeeeec
Q psy2521 441 ----VRSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 441 ----g~~~l~~~dl~~G~~~~~l~ 460 (783)
+..+++.++. +|+.+-++.
T Consensus 238 ~~~~~~~~~~~~~~-~g~~~W~~~ 260 (276)
T 3no2_A 238 AGKGKHPQLVEIDS-EGKVVWQLN 260 (276)
T ss_dssp GGGSCCCSEEEECT-TSBEEEEEC
T ss_pred ccccCCceEEEECC-CCCEEEEec
Confidence 2446777777 788755554
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.97 Score=46.06 Aligned_cols=237 Identities=9% Similarity=-0.011 Sum_probs=114.2
Q ss_pred eEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEE-eecCCCCCCCCcccccCCceEEEEEcCCCCC-CceeEE
Q psy2521 234 WNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQ-YCDINGTADGTETTAHMGQKIYYHVLGTEQD-KDIPVV 310 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~-~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~-~d~~v~ 310 (783)
..+++++|+.+++..... ....+.......-+++ ||... ... ......+++.++.+... .-..+-
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~-l~v~GG~~~-----------~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDR-IYVIGGYDG-----------RSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTE-EEEECCBCS-----------SCBCCCEEEEETTCCTTCCCEEEC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCE-EEEEcCCCC-----------CccCceEEEEECCCCCCCeeEECC
Confidence 356889998887643221 1111212223334554 44433 111 12234688888876541 012222
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEecCCC--CcEEEEEECCCCCCCcccCCCCceeeec--CccceeEEEEeeCCEEEE
Q psy2521 311 EFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ--GSDLHYFDLHSLPDGKISGKFPLKTVIP--GMDHHHEIIANNGPELIV 386 (783)
Q Consensus 311 ~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~--~~~l~~~dl~~g~~~~l~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~ 386 (783)
..+. +....... .-+++ |++....... .++++++|+.++ .|..+.. ........... ++.||+
T Consensus 98 ~~p~-~r~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~p~~r~~~~~~~~-~~~iyv 164 (301)
T 2vpj_A 98 PMNV-RRGLAGAT-TLGDM-IYVSGGFDGSRRHTSMERYDPNID---------QWSMLGDMQTAREGAGLVVA-SGVIYC 164 (301)
T ss_dssp CCSS-CCBSCEEE-EETTE-EEEECCBCSSCBCCEEEEEETTTT---------EEEEEEECSSCCBSCEEEEE-TTEEEE
T ss_pred CCCC-CccceeEE-EECCE-EEEEcccCCCcccceEEEEcCCCC---------eEEECCCCCCCcccceEEEE-CCEEEE
Confidence 2222 22222222 23555 4443322211 278999999773 1433221 11111222333 567888
Q ss_pred EECCCC--CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC---eeEEEEEECCCCceeeeec-
Q psy2521 387 KTTKNA--PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV---RSVMDLHDLNTGKRLHSFP- 460 (783)
Q Consensus 387 ~t~~~~--~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g---~~~l~~~dl~~G~~~~~l~- 460 (783)
....+. ....++.+|+.+.. |+.+-+.............+ +.|++....++ ...++++|+.+++. ..+.
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~~~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~ 239 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGH---WTNVTPMATKRSGAGVALLN-DHIYVVGGFDGTAHLSSVEAYNIRTDSW-TTVTS 239 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEEET-TEEEEECCBCSSSBCCCEEEEETTTTEE-EEECC
T ss_pred ECCCCCCcccceEEEEeCCCCc---EEeCCCCCcccccceEEEEC-CEEEEEeCCCCCcccceEEEEeCCCCcE-EECCC
Confidence 754332 24579999987765 88774332222222333444 78887765443 35799999976654 3443
Q ss_pred CC--CeEEEeeeccccccEEEEEEecCCC---CceEEEEeCCCCcCCCCCCceEEE
Q psy2521 461 LD--LGQITHISGRRKYNEVFYGFTSFLQ---PGTIYHCNIPENITDQDDFKPTIF 511 (783)
Q Consensus 461 ~~--~g~v~~~s~~~d~~~l~~~~ss~~~---P~~vy~~d~~~~~~~tg~~~~~~~ 511 (783)
+| ........ . ++.+++. .+... -..++.||+ +++ +++.+
T Consensus 240 ~p~~r~~~~~~~--~-~~~i~v~-GG~~~~~~~~~v~~yd~-----~~~--~W~~~ 284 (301)
T 2vpj_A 240 MTTPRCYVGATV--L-RGRLYAI-AGYDGNSLLSSIECYDP-----IID--SWEVV 284 (301)
T ss_dssp CSSCCBSCEEEE--E-TTEEEEE-CCBCSSSBEEEEEEEET-----TTT--EEEEE
T ss_pred CCCcccceeEEE--E-CCEEEEE-cCcCCCcccccEEEEcC-----CCC--eEEEc
Confidence 23 11111111 1 2345443 33322 257889998 455 55554
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.19 Score=52.78 Aligned_cols=118 Identities=11% Similarity=0.010 Sum_probs=66.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--------------cc----------------cccCee
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------KN----------------VKFPSI 260 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--------------~~----------------~~~~~~ 260 (783)
+.+++++|++.. +|..+.++.....|+++|+++|+...... .+ ....++
T Consensus 122 ~~~v~vd~~~g~-~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi 200 (343)
T 2qe8_A 122 VNDLAVDLIHNF-VYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI 200 (343)
T ss_dssp CCEEEEETTTTE-EEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred cceEEEecCCCE-EEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence 567899987664 45555432234689999998876432100 00 012468
Q ss_pred EEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCC---CC-CC-----ceeEEecCCCCeeEEEEEEecCCcEE
Q psy2521 261 SWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGT---EQ-DK-----DIPVVEFPNGRSLGLHSEVTDCGRYL 331 (783)
Q Consensus 261 ~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt---~~-~~-----d~~v~~~~~~~~~~~~~~~SpDGk~l 331 (783)
+|||||+.||+.... ..+||+.+... .. .. ..........+ .++++++||+..
T Consensus 201 a~s~dg~~ly~~~~~---------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~p---dgia~d~~G~l~ 262 (343)
T 2qe8_A 201 VLDAENEWLYLSPMH---------------STSMYRIKSADLSNLQLTDAELGSKIERYSEKPIC---DGISIDKDHNIY 262 (343)
T ss_dssp EECTTSCEEEEEESS---------------CSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSC---SCEEECTTCCEE
T ss_pred EeccCCCEEEEEeCC---------------CCeEEEEEHHHhcCCCCChhhhhcceEecccCCCC---ceEEECCCCCEE
Confidence 999999999887622 23677775421 00 00 01111111111 357889998643
Q ss_pred EEEEecCCCCcEEEEEECCC
Q psy2521 332 LVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 332 ~~~~~~~~~~~~l~~~dl~~ 351 (783)
+... ..+.|.++|.++
T Consensus 263 -va~~---~~~~V~~~d~~~ 278 (343)
T 2qe8_A 263 -VGDL---AHSAIGVITSAD 278 (343)
T ss_dssp -EEEG---GGTEEEEEETTT
T ss_pred -EEcc---CCCeEEEEECCC
Confidence 3322 237899999844
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=96.11 E-value=0.24 Score=50.74 Aligned_cols=164 Identities=8% Similarity=0.020 Sum_probs=88.5
Q ss_pred EEeeEEECCCCcEEEEEEecCC-----------CceEEEEEEECCCCccccccccccccCeeEEe----eCCCEEEEEEe
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSG-----------SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWT----HDHKGFFYNQY 274 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G-----------~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~Ws----pDg~~l~y~~~ 274 (783)
.+..+.++|||+.+ ++....+ .....|+.+|.+ |+............+++|+ |||+.||++..
T Consensus 118 ~~~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 118 GCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred CCcCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 35678999999743 3332210 012578999887 6543221111122578999 99987877652
Q ss_pred ecCCCCCCCCcccccCCceEEEEEcC-CCCCCc-eeEEecCCCC-eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 275 CDINGTADGTETTAHMGQKIYYHVLG-TEQDKD-IPVVEFPNGR-SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 275 ~~~~~~~~g~~~~~~~~~~v~~~~lg-t~~~~d-~~v~~~~~~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
....|+++++. +..... ..+...+... ....++.+++||+..+ ... ....|+++|.++
T Consensus 196 ---------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v-~~~---~~~~i~~~d~~~ 256 (314)
T 1pjx_A 196 ---------------PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV-ANW---GSSHIEVFGPDG 256 (314)
T ss_dssp ---------------TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE-EEE---TTTEEEEECTTC
T ss_pred ---------------CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE-EEc---CCCEEEEEcCCC
Confidence 12367777654 211111 1222222211 2345788999997443 221 125899999875
Q ss_pred CCCCcccCCCCceeeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCC
Q psy2521 352 LPDGKISGKFPLKTVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNP 405 (783)
Q Consensus 352 g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~ 405 (783)
|.. ...+......-.. .++++|+.||+.+.. +..|++++++..
T Consensus 257 g~~--------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~~ 300 (314)
T 1pjx_A 257 GQP--------KMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQRN 300 (314)
T ss_dssp BSC--------SEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECSSC
T ss_pred CcE--------eEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCCCC
Confidence 311 1111111111112 468898888887654 246999988653
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=1.4 Score=44.31 Aligned_cols=196 Identities=10% Similarity=0.077 Sum_probs=99.5
Q ss_pred EEeeEEE-CCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-cc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAF-SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~-SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
...++++ +++|+.++ .+..+ ...|+++|. +|+.+... .. .....+++++|||+ |+++..
T Consensus 78 ~p~~i~~~~~~g~l~v--~~~~~--~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~------------ 139 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIV--TERSP--THQIQIYNQ-YGQFVRKFGATILQHPRGVTVDNKGR-IIVVEC------------ 139 (286)
T ss_dssp SEEEEEEETTTTEEEE--EECGG--GCEEEEECT-TSCEEEEECTTTCSCEEEEEECTTSC-EEEEET------------
T ss_pred CceEEEEEcCCCeEEE--EcCCC--CCEEEEECC-CCcEEEEecCccCCCceEEEEeCCCC-EEEEEC------------
Confidence 3567788 57776433 33211 246899994 45443211 11 11235788999986 655541
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
....|++++... +....+..........++.+++||+ |++... ....|+++|.++. . ...+
T Consensus 140 ---~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~~i~~~~~~g~---~------~~~~ 200 (286)
T 1q7f_A 140 ---KVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQE-IFISDN---RAHCVKVFNYEGQ---Y------LRQI 200 (286)
T ss_dssp ---TTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSE-EEEEEG---GGTEEEEEETTCC---E------EEEE
T ss_pred ---CCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCC-EEEEEC---CCCEEEEEcCCCC---E------EEEE
Confidence 123677776432 2222232211112335788999998 433322 2368999998651 0 1111
Q ss_pred ec-C-ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 367 IP-G-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 367 ~~-~-~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
.. + ...-.. .++++| .+|+....+ +..|.+++.++.. ...+...........+.+..++.|+++. .+ .
T Consensus 201 ~~~g~~~~p~~i~~d~~G-~l~v~~~~~--~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~--~ 271 (286)
T 1q7f_A 201 GGEGITNYPIGVGINSNG-EILIADNHN--NFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLAS-KD--Y 271 (286)
T ss_dssp SCTTTSCSEEEEEECTTC-CEEEEECSS--SCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEEE-TT--T
T ss_pred ccCCccCCCcEEEECCCC-CEEEEeCCC--CEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEEC-CC--C
Confidence 11 1 011112 477777 466654321 2368889865432 2333332222223344554446777774 34 4
Q ss_pred EEEEEECC
Q psy2521 444 VMDLHDLN 451 (783)
Q Consensus 444 ~l~~~dl~ 451 (783)
.|.+|++.
T Consensus 272 ~v~v~~~~ 279 (286)
T 1q7f_A 272 RLYIYRYV 279 (286)
T ss_dssp EEEEEECS
T ss_pred eEEEEEcc
Confidence 68888773
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.39 Score=50.69 Aligned_cols=176 Identities=9% Similarity=0.025 Sum_probs=85.0
Q ss_pred EEEEEEECCC--Cccccccccc-------cccCeeEEee--CCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC
Q psy2521 235 NTLHIKDVDT--GKDYPEVLKN-------VKFPSISWTH--DHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ 303 (783)
Q Consensus 235 ~~i~v~Dl~t--g~~~~~~~~~-------~~~~~~~Wsp--Dg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~ 303 (783)
..|+++|+++ ++.....+.+ ....++...+ ||+.-+|...... ....-.|+.++.++.
T Consensus 83 G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~----------~~s~ielf~~d~~~~- 151 (355)
T 3sre_A 83 GKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG----------SSSTVEVFKFQEEEK- 151 (355)
T ss_dssp CEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST----------TCCEEEEEEEETTTT-
T ss_pred CeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC----------CCCeEEEEEEECCCC-
Confidence 4688999873 3333333322 1234566556 4654444442211 111224555555432
Q ss_pred CCceeEEecCCCC-eeEEEEEEecCCcEEEEEEec-------------CCCCcEEEEEECCCCCCCcccCCCCceeeecC
Q psy2521 304 DKDIPVVEFPNGR-SLGLHSEVTDCGRYLLVSTSN-------------NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG 369 (783)
Q Consensus 304 ~~d~~v~~~~~~~-~~~~~~~~SpDGk~l~~~~~~-------------~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~ 369 (783)
..+++-.....+ ....++...+||++.+-...- +.....||.++... ...+..+
T Consensus 152 -~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-----------~~~~~~~ 219 (355)
T 3sre_A 152 -SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-----------VRVVAEG 219 (355)
T ss_dssp -EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-----------CEEEEEE
T ss_pred -EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-----------EEEeecC
Confidence 222332221111 123477889999865422110 01125788887632 2233333
Q ss_pred ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee-CCEEEEEEe
Q psy2521 370 MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYI 438 (783)
Q Consensus 370 ~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~-g~~l~~~~~ 438 (783)
...... .|||||+.||+.... ..+|++++++....-.-..++. . .....++.+.. ++.+++...
T Consensus 220 l~~pNGia~spDg~~lYvadt~---~~~I~~~~~~~~g~l~~~~~~~-~-~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 220 FDFANGINISPDGKYVYIAELL---AHKIHVYEKHANWTLTPLRVLS-F-DTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp ESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECTTSCEEEEEEEE-C-SSEEEEEEECTTTCCEEEEEE
T ss_pred CcccCcceECCCCCEEEEEeCC---CCeEEEEEECCCCcEecCEEEe-C-CCCCceEEEeCCCCcEEEEec
Confidence 222222 599999999986543 3578888886422111122332 2 23445666654 256666444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 783 | ||||
| d1qfma1 | 430 | b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-termin | 4e-78 | |
| d1qfma2 | 280 | c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-term | 7e-38 | |
| d1xfda2 | 258 | c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-li | 3e-16 | |
| d1l7aa_ | 318 | c.69.1.25 (A:) Cephalosporin C deacetylase {Bacill | 6e-16 | |
| d1vlqa_ | 322 | c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Therm | 8e-15 | |
| d2bgra2 | 258 | c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26 | 2e-13 | |
| d2hu7a2 | 260 | c.69.1.33 (A:322-581) Acylamino-acid-releasing enz | 2e-13 | |
| d1mpxa2 | 381 | c.69.1.21 (A:24-404) Alpha-amino acid ester hydrol | 3e-13 | |
| d2d81a1 | 318 | c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymer | 3e-09 | |
| d2b9va2 | 385 | c.69.1.21 (A:50-434) Alpha-amino acid ester hydrol | 4e-09 | |
| d2gzsa1 | 265 | c.69.1.38 (A:41-305) Enterobactin and salmochelin | 4e-07 | |
| d1sfra_ | 288 | c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculo | 5e-07 | |
| d2jbwa1 | 360 | c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine h | 2e-05 | |
| d1ufoa_ | 238 | c.69.1.27 (A:) Hypothetical protein TT1662 {Thermu | 2e-05 | |
| d1ju3a2 | 347 | c.69.1.21 (A:5-351) Bacterial cocaine esterase N-t | 1e-04 | |
| d1thta_ | 302 | c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase | 1e-04 | |
| d1dqza_ | 280 | c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculo | 3e-04 |
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 430 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 256 bits (654), Expect = 4e-78
Identities = 181/463 (39%), Positives = 262/463 (56%), Gaps = 39/463 (8%)
Query: 55 PYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIK 114
YP V +DET DYHG K+ DPY WLE P +T+ F QN I+ P+ +
Sbjct: 5 QYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQ-------- 56
Query: 115 EQLLRMANYEKYSAPHFGVSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFH 174
P R KE++ + +Y KYS ++ YFYF+
Sbjct: 57 --------------------CPI------RGLYKERMTELYDYPKYSCHFKKGKRYFYFY 90
Query: 175 NKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDW 234
N GLQN +LYVQ +L G VFLDPN LS DGT AL+ YAFS++G++FAY LS SGSDW
Sbjct: 91 NTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDW 150
Query: 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294
T+ VD K+ P+VL+ VKF ++WTHD KG FYN Y +G +DGTET+ ++ QK+
Sbjct: 151 VTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL 210
Query: 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPD 354
YYHVLGT+Q +DI EFP+ +E++D GRY+L+S + ++
Sbjct: 211 YYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQES 270
Query: 355 GKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414
I+G +I + ++ + N G KT +++P +++ I+ +P E WK L+
Sbjct: 271 NGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330
Query: 415 PEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRK 474
PE E L+ VA V +N L++ Y+ +V++ + LHDL TG L FPL++G + SG++K
Sbjct: 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKK 390
Query: 475 YNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVP 517
E+FY FTSFL PG IYHC++ +++ +P +FRE V
Sbjct: 391 DTEIFYQFTSFLSPGIIYHCDL-----TKEELEPRVFREVTVK 428
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 140 bits (353), Expect = 7e-38
Identities = 136/253 (53%), Positives = 184/253 (72%), Gaps = 1/253 (0%)
Query: 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMF 580
+ +QT Q+++ SKDGT++PM+I+H+ G + +P +YGYGG+ +S+ P +S+SR +F
Sbjct: 2 ASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIF 61
Query: 581 LRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIM 640
+RH G+ A+ NIRGGGE GE WH G L KQNCFDDFQ AAEY+I + YT PK +TI
Sbjct: 62 VRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTIN 121
Query: 641 GGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNL 700
GGSNGGLLV C NQRP+L+G + VG +DML+F+K+TI + +++G ++K HF L
Sbjct: 122 GGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWL 181
Query: 701 LSYSPLHNIKVPP-NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759
+ YSPLHN+K+P ++ QYP+ L+LT DHDDRV PLHS KFIATLQ +G Q NPLL
Sbjct: 182 IKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLL 241
Query: 760 LRVEQDAGHGQGK 772
+ V+ AGHG GK
Sbjct: 242 IHVDTKAGHGAGK 254
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.1 bits (188), Expect = 3e-16
Identities = 40/239 (16%), Positives = 67/239 (28%), Gaps = 15/239 (6%)
Query: 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCM-FLRHFNGIYAI 590
D +PM I+ P+++ G SV F +S + +
Sbjct: 9 EIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 68
Query: 591 PNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG 650
+ RG G G + R D A M+ ++Y + + G GG L
Sbjct: 69 CDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLST 128
Query: 651 ACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIK 710
L + E G AL + K + SE + H +
Sbjct: 129 YILPAKGENQGQTFTCGSALSPITDFKLY--ASAFSERYLGLHGLDNRAYEMTKVAHRVS 186
Query: 711 VPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
D+++ H+ + I L K L++ D H
Sbjct: 187 ALEEQQFLII----HPTADEKIHFQHTAELITQLIRG-------KANYSLQIYPDESHY 234
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Score = 77.1 bits (188), Expect = 6e-16
Identities = 36/277 (12%), Positives = 69/277 (24%), Gaps = 32/277 (11%)
Query: 518 EFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISR 577
++ + ++ ++S R+ + +P I+ +G I
Sbjct: 48 DYPADGVKVYRLTYKSFGNARITGWYAVPDKE---GPHPAIVKYHGYNASY---DGEIHE 101
Query: 578 CMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL--------------LKKQNCFDDFQAAA 623
+ +RG + + + + D A
Sbjct: 102 MVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRAL 161
Query: 624 EYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI--A 681
E + + I + GGS GG L A A + R +
Sbjct: 162 EVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDVALEQP 221
Query: 682 YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741
Y + F N + + + + L+ G D PP +
Sbjct: 222 YLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAY 281
Query: 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIEL 778
L+ L+V + GH A E
Sbjct: 282 NHLET----------KKELKVYRYFGHEYIPAFQTEK 308
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Score = 74.0 bits (180), Expect = 8e-15
Identities = 38/279 (13%), Positives = 64/279 (22%), Gaps = 33/279 (11%)
Query: 518 EFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSIS- 576
E + V F G R+ +++ + P ++ G G P +
Sbjct: 47 ESHLKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFPHDWLFW 104
Query: 577 ------------RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ----NCFDDFQ 620
R G + G L + F D
Sbjct: 105 PSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAV 164
Query: 621 AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT- 679
A E + + I I GGS GG + A + + R +
Sbjct: 165 RAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFRRAVQLVD 224
Query: 680 -IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738
Y + F + + S + L G D+ PP +
Sbjct: 225 THPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAK--IPALFSVGLMDNICPPSTVF 282
Query: 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777
P +R+ H G +
Sbjct: 283 AAYNYYAG----------PKEIRIYPYNNHEGGGSFQAV 311
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 69.1 bits (167), Expect = 2e-13
Identities = 38/246 (15%), Positives = 74/246 (30%), Gaps = 17/246 (6%)
Query: 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG-YGVSVLPTFSISRCMFLRHF 584
+K++ F + T+ +I ++++ P+++ Y G F ++ +L
Sbjct: 3 SKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST 62
Query: 585 NG-IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGS 643
I A + RG G G+ +A +D AA + K I I G S
Sbjct: 63 ENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWS 122
Query: 644 NGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSY 703
GG + L ++ + + ++ Y N + ++ +
Sbjct: 123 YGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMS 182
Query: 704 SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 763
+ +V DD V S + L +
Sbjct: 183 RAENFKQVEYLLIHGT--------ADDNVHFQQSAQISKALVDV-------GVDFQAMWY 227
Query: 764 QDAGHG 769
D HG
Sbjct: 228 TDEDHG 233
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Score = 69.1 bits (167), Expect = 2e-13
Identities = 40/255 (15%), Positives = 75/255 (29%), Gaps = 20/255 (7%)
Query: 516 VPE-FEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS 574
+PE ++ ++ V+ S DG+RVP Y++ A P ++ +GG ++
Sbjct: 1 LPEDLRRSIAGSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWD 58
Query: 575 ISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634
+ G E + +A ++
Sbjct: 59 TFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG---DPCGGELEDVSAAARWARESGLA 115
Query: 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNK 694
+ IMG S GG + L +P L+ A + +D + + A +
Sbjct: 116 SELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGS 175
Query: 695 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754
S + P +P +D R P + + L +
Sbjct: 176 REIMRSRSPINHVDRIKEPLALIHP-------QNDSRTPLKPLLRLMGELLAR------- 221
Query: 755 KNPLLLRVEQDAGHG 769
+ DAGH
Sbjct: 222 GKTFEAHIIPDAGHA 236
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} Length = 381 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Score = 69.8 bits (169), Expect = 3e-13
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 16/182 (8%)
Query: 508 PTIFRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVII----YGYG 563
P I + V + ++V +DG ++ I+ GA + P+++ Y
Sbjct: 6 PDITGKPFVAADASNDYIKREVMIPMRDGVKLHTVIVLPKGA---KNAPIVLTRTPYDAS 62
Query: 564 GYGVSVLPTFSISR----CMFLRHFNGIYAIPNIRGGGELGEDWH-----NAGRLLKKQN 614
G + I ++RG D+ + +
Sbjct: 63 GRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEGDYVMTRPLRGPLNPSEVD 122
Query: 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674
D ++++ + ++G S G V L A+ +D
Sbjct: 123 HATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWM 182
Query: 675 FN 676
+
Sbjct: 183 GD 184
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Score = 57.0 bits (137), Expect = 3e-09
Identities = 16/139 (11%), Positives = 35/139 (25%), Gaps = 15/139 (10%)
Query: 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALD---MLRFNKFTIAYYSESEFGS 690
P +++ G ++GG + +++ + + Y +
Sbjct: 10 PNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYTSCMYNGYPSITT 69
Query: 691 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 750
P + + + N+ + TG D V P + A L
Sbjct: 70 PTANMKSWSGNQIASVANLGQRK-------IYMWTGSSDTTVGPNVMNQLKAQLGNF--- 119
Query: 751 LPYQKNPLLLRVEQDAGHG 769
+ A H
Sbjct: 120 --DNSANVSYVTTTGAVHT 136
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} Length = 385 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Score = 57.0 bits (136), Expect = 4e-09
Identities = 26/192 (13%), Positives = 54/192 (28%), Gaps = 19/192 (9%)
Query: 512 RETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVII----YGYGGYGV 567
+P + + ++V +DG ++ I+ A R P+++ Y G
Sbjct: 14 ASVHMPTDQQRDYIKREVMVPMRDGVKLYTVIVIPKNA---RNAPILLTRTPYNAKGRAN 70
Query: 568 SVLPTFSISRC------MFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF----- 616
V ++ +F+ I +IRG D+ N
Sbjct: 71 RVPNALTMREVLPQGDDVFVEG-GYIRVFQDIRGKYGSQGDYVMTRPPHGPLNPTKTDET 129
Query: 617 DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676
D +++++ + + G S G V L A +D +
Sbjct: 130 TDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWMGD 189
Query: 677 KFTIAYYSESEF 688
+
Sbjct: 190 DWFHYGAFRQGA 201
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} Length = 265 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Score = 50.0 bits (118), Expect = 4e-07
Identities = 29/250 (11%), Positives = 63/250 (25%), Gaps = 10/250 (4%)
Query: 521 PTLFQTKQVYFRSKDGTR-VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCM 579
+ F S DGTR ++ P++ G + L + +
Sbjct: 8 SVFYHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDDELLKQ-- 65
Query: 580 FLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITI 639
+ + + ++ D + + + +
Sbjct: 66 LSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLE 125
Query: 640 MGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHN 699
+ QR L+G + + LD + + +YYS S
Sbjct: 126 TRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLSSSYFRSYYSASPSLGRGYDALLSR 185
Query: 700 LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759
+ + PL + AT + + + L++K +
Sbjct: 186 VTAVEPLQFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTLTILKDK-------GVNAV 238
Query: 760 LRVEQDAGHG 769
+ GHG
Sbjct: 239 FWDFPNLGHG 248
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 50.0 bits (118), Expect = 5e-07
Identities = 25/214 (11%), Positives = 57/214 (26%), Gaps = 17/214 (7%)
Query: 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCM--FLRHFNGIYAIPN 592
G + + +P + G + I+ + +P
Sbjct: 19 MGRDIKVQFQ-----SGGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPV 73
Query: 593 IRGGGELGEDWHNA-GRLLKKQNCFDDF--QAAAEYMINKKYTKPKYITIMGGSNGGLLV 649
+ + A G+ + ++ F ++ ++ KP ++G S
Sbjct: 74 GGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSA 133
Query: 650 GACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLS-----YS 704
P+ + A + G LD + T+ + + G +
Sbjct: 134 LTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRND 193
Query: 705 PLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738
PL N+ N V G+ ++
Sbjct: 194 PLLNVGKLIANN--TRVWVYCGNGKPSDLGGNNL 225
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 360 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 40/260 (15%), Positives = 68/260 (26%), Gaps = 37/260 (14%)
Query: 511 FRETIVPEFEPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL 570
VY R +G +I + G
Sbjct: 102 LSPPAERHELVVDGIPMPVYVRIPEGPGPHPAVIM-------------LGGLESTKEESF 148
Query: 571 PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK 630
+ + L + G GE+ E AG + A + + +
Sbjct: 149 QMEN----LVLDRGMATAT-FDGPGQGEMFEYKRIAG------DYEKYTSAVVDLLTKLE 197
Query: 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGS 690
+ I ++G S GG P A + G D+ ++ T ++ S
Sbjct: 198 AIRNDAIGVLGRSLGGNYALKSAACEPR-LAACISWGGFSDLDYWDLETPLTKESWKYVS 256
Query: 691 PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGS 750
+ L ++ L V T +L G D VP + + +
Sbjct: 257 KVDTLEEARLHVHAALETRDVLSQIA--CPTYILHGV-HDEVPLSFVDTVLELVPAE--- 310
Query: 751 LPYQKNPLLLRVEQDAGHGQ 770
L L VE+D H
Sbjct: 311 ------HLNLVVEKDGDHCC 324
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} Length = 238 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Score = 44.0 bits (102), Expect = 2e-05
Identities = 31/217 (14%), Positives = 54/217 (24%), Gaps = 30/217 (13%)
Query: 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCF 616
+ ++G G +L + R F + + GE ++ + +
Sbjct: 28 LALHGLQGSKEHILA---LLPGYAERGFLLLA--FDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 617 DDF----QAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 672
+ A + + + GGS G + L + G
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF------- 135
Query: 673 LRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV 732
S P + + L L G D V
Sbjct: 136 ---------IGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIV 186
Query: 733 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769
P K + L+ Y + L VE+ AGH
Sbjct: 187 PLARMEKTLEALRPH-----YPEGRLARFVEEGAGHT 218
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Score = 42.9 bits (99), Expect = 1e-04
Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 13/150 (8%)
Query: 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIY--GYGGYGVSVLPTFSISRCMFLRHF 584
V +DG R+ + + PV++ Y + V T S + F+R
Sbjct: 6 SNVMVPMRDGVRLAVDLYRPDAD---GPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRD- 61
Query: 585 NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSN 644
I + RG ++ + I ++ + + G S
Sbjct: 62 GYAVVIQDTRGLFASEGEFV-------PHVDDEADAEDTLSWILEQAWCDGNVGMFGVSY 114
Query: 645 GGLLVGACLNQRPELYGAALILVGALDMLR 674
G+ A + + D+ R
Sbjct: 115 LGVTQWQAAVSGVGGLKAIAPSMASADLYR 144
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 25/232 (10%), Positives = 62/232 (26%), Gaps = 23/232 (9%)
Query: 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF 584
+T R +G + ++ + + N ++I G+ + ++ + F
Sbjct: 3 KTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIAS--GFARRMDHFAGLAEYLSTNGF 60
Query: 585 NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSN 644
+ ++ ++ G K + + + I ++ S
Sbjct: 61 H-VFRYDSLHHVGLSSGSIDEFTMTTGKNSLCT-------VYHWLQTKGTQNIGLIAASL 112
Query: 645 GGLLV----------GACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNK 694
+ L D L + + E ++
Sbjct: 113 SARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSE 172
Query: 695 THFHNLLS--YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATL 744
+ + L + NT P + T ++DD V Y +A +
Sbjct: 173 VFVRDCFEHHWDTLDSTLDKVANTSVP-LIAFTANNDDWVKQEEVYDMLAHI 223
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 280 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.0 bits (95), Expect = 3e-04
Identities = 23/157 (14%), Positives = 40/157 (25%), Gaps = 12/157 (7%)
Query: 587 IYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI----NKKYTKPKYITIMGG 642
+P G DW+ + + + M K P +G
Sbjct: 63 SVIMPV-GGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGL 121
Query: 643 SNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLS 702
S G P+ + A L G L+ T+ + ++ G N + +
Sbjct: 122 SMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGLAMNDSGGYNANSMWGPSSD 181
Query: 703 -----YSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP 734
P+ I N V G+
Sbjct: 182 PAWKRNDPMVQIPRLVANN--TRIWVYCGNGTPSDLG 216
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 783 | |||
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 100.0 | |
| d1qfma2 | 280 | Prolyl oligopeptidase, C-terminal domain {Pig (Sus | 99.97 | |
| d2hu7a2 | 260 | Acylamino-acid-releasing enzyme, C-terminal donain | 99.97 | |
| d2bgra2 | 258 | Dipeptidyl peptidase IV/CD26, C-terminal domain {P | 99.97 | |
| d1xfda2 | 258 | Dipeptidyl aminopeptidase-like protein 6, DPP6, C- | 99.96 | |
| d1vlqa_ | 322 | Acetyl xylan esterase TM0077 {Thermotoga maritima | 99.88 | |
| d1l7aa_ | 318 | Cephalosporin C deacetylase {Bacillus subtilis [Ta | 99.87 | |
| d2jbwa1 | 360 | 2,6-dihydropseudooxynicotine hydrolase {Arthrobact | 99.83 | |
| d2pbla1 | 261 | Uncharacterized protein TM1040_2492 {Silicibacter | 99.81 | |
| d1jkma_ | 358 | Carboxylesterase {Bacillus subtilis, brefeldin A e | 99.8 | |
| d1lzla_ | 317 | Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | 99.79 | |
| d1dina_ | 233 | Dienelactone hydrolase {Pseudomonas sp., B13 [TaxI | 99.79 | |
| d1jjia_ | 311 | Carboxylesterase {Archaeon Archaeoglobus fulgidus | 99.78 | |
| d1thta_ | 302 | Myristoyl-ACP-specific thioesterase {Vibrio harvey | 99.77 | |
| d1mpxa2 | 381 | Alpha-amino acid ester hydrolase {Xanthomonas citr | 99.77 | |
| d2fuka1 | 218 | XC6422 protein {Xanthomonas campestris [TaxId: 339 | 99.76 | |
| d1jfra_ | 260 | Lipase {Streptomyces exfoliatus [TaxId: 1905]} | 99.75 | |
| d1u4na_ | 308 | Carboxylesterase {Alicyclobacillus acidocaldarius | 99.75 | |
| d1ufoa_ | 238 | Hypothetical protein TT1662 {Thermus thermophilus | 99.74 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.73 | |
| d1sfra_ | 288 | Antigen 85a {Mycobacterium tuberculosis [TaxId: 17 | 99.73 | |
| d2gzsa1 | 265 | Enterobactin and salmochelin hydrolase IroE {Esche | 99.7 | |
| d1ju3a2 | 347 | Bacterial cocaine esterase N-terminal domain {Rhod | 99.7 | |
| d1vkha_ | 263 | Putative serine hydrolase Ydr428c {Baker's yeast ( | 99.7 | |
| d2h1ia1 | 202 | Carboxylesterase {Bacillus cereus [TaxId: 1396]} | 99.68 | |
| d1lnsa3 | 405 | X-Prolyl dipeptidyl aminopeptidase PepX, middle do | 99.68 | |
| d1jjfa_ | 255 | Feruloyl esterase domain of the cellulosomal xylan | 99.67 | |
| d2b9va2 | 385 | Alpha-amino acid ester hydrolase {Acetobacter past | 99.67 | |
| d3b5ea1 | 209 | Uncharacterized protein Mll8374 {Mesorhizobium lot | 99.64 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.64 | |
| d2i3da1 | 218 | Hypothetical protein Atu1826 {Agrobacterium tumefa | 99.63 | |
| d3c8da2 | 246 | Enterochelin esterase, catalytic domain {Shigella | 99.62 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.62 | |
| d1k8qa_ | 377 | Gastric lipase {Dog (Canis familiaris) [TaxId: 961 | 99.61 | |
| d1r88a_ | 267 | Antigen pt51/mpb51 {Mycobacterium tuberculosis [Ta | 99.59 | |
| d1fj2a_ | 229 | Acyl protein thioesterase 1 {Human (Homo sapiens) | 99.59 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.57 | |
| d2r8ba1 | 203 | Uncharacterized protein Atu2452 {Agrobacterium tum | 99.57 | |
| d1q0ra_ | 297 | Aclacinomycin methylesterase RdmC {Streptomyces pu | 99.56 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.56 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.55 | |
| d1a8qa_ | 274 | Bromoperoxidase A1 {Streptomyces aureofaciens [Tax | 99.54 | |
| d1wb4a1 | 273 | Feruloyl esterase domain of the cellulosomal xylan | 99.53 | |
| d1dqza_ | 280 | Antigen 85c {Mycobacterium tuberculosis [TaxId: 17 | 99.53 | |
| d1azwa_ | 313 | Proline iminopeptidase {Xanthomonas campestris, pv | 99.52 | |
| d1imja_ | 208 | Ccg1/TafII250-interacting factor B (Cib) {Human (H | 99.49 | |
| d1c4xa_ | 281 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.49 | |
| d1uk8a_ | 271 | Meta-cleavage product hydrolase CumD {Pseudomonas | 99.49 | |
| d1tqha_ | 242 | Carboxylesterase Est {Bacillus stearothermophilus | 99.49 | |
| d1j1ia_ | 268 | Meta cleavage compound hydrolase CarC {Janthinobac | 99.48 | |
| d1a88a_ | 275 | Chloroperoxidase L {Streptomyces lividans [TaxId: | 99.48 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.48 | |
| d1mtza_ | 290 | Tricorn interacting factor F1 {Archaeon Thermoplas | 99.48 | |
| d1a8sa_ | 273 | Chloroperoxidase F {Pseudomonas fluorescens [TaxId | 99.46 | |
| d1va4a_ | 271 | Arylesterase {Pseudomonas fluorescens [TaxId: 294] | 99.46 | |
| d1uxoa_ | 186 | Hypothetical protein YdeN {Bacillus subtilis [TaxI | 99.46 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 99.44 | |
| d2rhwa1 | 283 | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas | 99.43 | |
| d1b6ga_ | 310 | Haloalkane dehalogenase {Xanthobacter autotrophicu | 99.43 | |
| d1zd3a2 | 322 | Mammalian epoxide hydrolase, C-terminal domain {Hu | 99.42 | |
| d1ehya_ | 293 | Bacterial epoxide hydrolase {Agrobacterium radioba | 99.41 | |
| d1auoa_ | 218 | Carboxylesterase {Pseudomonas fluorescens [TaxId: | 99.4 | |
| d1bn7a_ | 291 | Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1 | 99.39 | |
| d1xkla_ | 258 | Salicylic acid-binding protein 2 (SABP2) {Common t | 99.38 | |
| d1brta_ | 277 | Bromoperoxidase A2 {Streptomyces aureofaciens [Tax | 99.38 | |
| d1wm1a_ | 313 | Proline aminopeptidase {Serratia marcescens [TaxId | 99.35 | |
| d1hkha_ | 279 | Gamma-lactamase {Aureobacterium sp. [TaxId: 51671] | 99.35 | |
| d3c70a1 | 256 | Hydroxynitrile lyase {Rubber tree (Hevea brasilien | 99.33 | |
| d1pv1a_ | 299 | Hypothetical esterase YJL068C {Baker's yeast (Sacc | 99.31 | |
| d2d81a1 | 318 | Polyhydroxybutyrate depolymerase {Penicillium funi | 99.28 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.27 | |
| d1m33a_ | 256 | Biotin biosynthesis protein BioH {Escherichia coli | 99.27 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.17 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.16 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.16 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.12 | |
| d1r3da_ | 264 | Hypothetical protein VC1974 {Vibrio cholerae [TaxI | 99.11 | |
| d1mj5a_ | 298 | Haloalkane dehalogenase {Sphingomonas paucimobilis | 99.09 | |
| d1qlwa_ | 318 | A novel bacterial esterase {Alcaligenes sp. [TaxId | 99.02 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.99 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.96 | |
| d2b61a1 | 357 | Homoserine O-acetyltransferase {Haemophilus influe | 98.88 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.87 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.86 | |
| d1pjaa_ | 268 | Palmitoyl protein thioesterase 2 {Human (Homo sapi | 98.86 | |
| d1ukca_ | 517 | Esterase EstA {Aspergillus niger [TaxId: 5061]} | 98.83 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.78 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 98.78 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.78 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.77 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.76 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 98.75 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.75 | |
| d1llfa_ | 534 | Type-B carboxylesterase/lipase {Candida cylindrace | 98.74 | |
| d1qo7a_ | 394 | Bacterial epoxide hydrolase {Aspergillus niger [Ta | 98.72 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.72 | |
| d2h7ca1 | 532 | Mammalian carboxylesterase (liver carboxylesterase | 98.68 | |
| d1qe3a_ | 483 | Thermophilic para-nitrobenzyl esterase (PNB estera | 98.68 | |
| d1ispa_ | 179 | Lipase A {Bacillus subtilis [TaxId: 1423]} | 98.67 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 98.67 | |
| d1tcaa_ | 317 | Triacylglycerol lipase {Yeast (Candida antarctica) | 98.66 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 98.66 | |
| d2ha2a1 | 542 | Acetylcholinesterase {Mouse (Mus musculus) [TaxId: | 98.65 | |
| d2pl5a1 | 362 | Homoserine O-acetyltransferase {Leptospira interro | 98.64 | |
| d2vata1 | 376 | Acetyl-CoA:deacetylcephalosporin C acetyltransfera | 98.64 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.64 | |
| d1thga_ | 544 | Type-B carboxylesterase/lipase {Fungus (Geotrichum | 98.63 | |
| d1ea5a_ | 532 | Acetylcholinesterase {Pacific electric ray (Torped | 98.6 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.59 | |
| d1p0ia_ | 526 | Butyryl cholinesterase {Human (Homo sapiens) [TaxI | 98.57 | |
| d1dx4a_ | 571 | Acetylcholinesterase {Fruit fly (Drosophila melano | 98.55 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.5 | |
| d1cvla_ | 319 | Lipase {Chromobacterium viscosum [TaxId: 42739]} | 98.49 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.47 | |
| d1ex9a_ | 285 | Lipase {Pseudomonas aeruginosa [TaxId: 287]} | 98.46 | |
| d2bcea_ | 579 | Bile-salt activated lipase (cholesterol esterase) | 98.46 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 98.44 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 98.43 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 98.43 | |
| d1jmkc_ | 230 | Surfactin synthetase, SrfA {Bacillus subtilis [Tax | 98.42 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.4 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.39 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.37 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.26 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 98.23 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.2 | |
| d2h7xa1 | 283 | Picromycin polyketide synthase {Streptomyces venez | 98.18 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.17 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 98.16 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.15 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.14 | |
| d2dsta1 | 122 | Hypothetical protein TTHA1544 {Thermus thermophilu | 98.14 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 98.14 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.13 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 98.04 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 97.99 | |
| d1ei9a_ | 279 | Palmitoyl protein thioesterase 1 {Cow (Bos taurus) | 97.96 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 97.77 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 97.77 | |
| d1xkta_ | 286 | Fatty acid synthase {Human (Homo sapiens) [TaxId: | 97.73 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 97.7 | |
| d1rp1a2 | 337 | Pancreatic lipase, N-terminal domain {Dog (Canis f | 97.69 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 97.66 | |
| d1bu8a2 | 338 | Pancreatic lipase, N-terminal domain {Rat (Rattus | 97.54 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.48 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.47 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.29 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.29 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 97.23 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.23 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.21 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.08 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.07 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.93 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 96.89 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 96.87 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.76 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 96.68 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.61 | |
| d1mo2a_ | 255 | Erythromycin polyketide synthase {Saccharopolyspor | 96.48 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 96.36 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 96.3 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 96.24 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 96.13 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.11 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.05 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 96.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 95.87 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 95.59 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 95.2 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 95.12 | |
| g1wht.1 | 409 | Serine carboxypeptidase II {Wheat (Triticum vulgar | 94.07 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 93.67 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 93.45 | |
| d1ivya_ | 452 | Human 'protective protein', HPP {Human (Homo sapie | 92.91 | |
| d1ku0a_ | 388 | Lipase L1 {Bacillus stearothermophilus [TaxId: 142 | 92.91 | |
| g1gxs.1 | 425 | Hydroxynitrile lyase {Sorghum (Sorghum bicolor) [T | 87.86 | |
| d1wpxa1 | 421 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 87.42 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 83.96 | |
| d1ac5a_ | 483 | Serine carboxypeptidase II {Baker's yeast (Sacchar | 82.62 |
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=9.7e-59 Score=516.35 Aligned_cols=425 Identities=42% Similarity=0.770 Sum_probs=365.7
Q ss_pred CCCCCCCccCCceeccccCceecCCCcccCCCCChHHHHHHHHhhhhhHhHhcCCccHHHHHHHHHHhhhccccCCCCCC
Q psy2521 53 TGPYPKVRKDETVEDDYHGMKIKDPYRWLEYPHCAETQIFNFMQNNISNPYCQNHSDREAIKEQLLRMANYEKYSAPHFG 132 (783)
Q Consensus 53 ~~~~P~~~~~~~~~~~~hg~~~~Dpy~WLed~~~~ev~~~~~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 132 (783)
.++||.++|...+++++||+++.|||+||||.++|+|++||++||++|+++|+++|.|+.|
T Consensus 3 ~~~yP~~~~~~~~~~~~hG~~~~DpY~WLed~~~~~v~~wl~~eN~~t~~~l~~~~~~~~~------------------- 63 (430)
T d1qfma1 3 SFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLY------------------- 63 (430)
T ss_dssp CSCCCCCCCCTTCEEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHSSTHHHHH-------------------
T ss_pred CCCCCCCcCCCCeeeccCCCEEeeCchhhcCCCCHHHHHHHHHHHHHHHHHHcCChhHHHH-------------------
Confidence 5889988776556699999999999999999999999999999999999999999988888
Q ss_pred CCCCccCCCCcHHHHHHHHHhhcCCCccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEe
Q psy2521 133 VSNPYCQNHTDREAIKEQLLRMANYEKYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALK 212 (783)
Q Consensus 133 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~ 212 (783)
+++|+++.+.++.++|.++|++|||.++.+.+++..+|++...++++++|||+|++++++.+.+.
T Consensus 64 ---------------~~~~~~~~~~~~~~~p~~~g~~y~~~~~~~~~~~~~~~~~~~~~~~~evllD~n~la~~~~~~~~ 128 (430)
T d1qfma1 64 ---------------KERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALR 128 (430)
T ss_dssp ---------------HHHHHHHTCSCEECCCEEETTEEEEEEECSSCSSCEEEEESSSSSCCEEEECGGGGCSSSCEEEE
T ss_pred ---------------HHHHHhhhcCCceeeeEEeCCEEEEEEecCCCccceEEeccccCCCeeeecchhhhcccccceec
Confidence 66666777779999999999999999999988999999998878899999999999998889999
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
++++||||++|||+.+.+|+|+++|+++|++||+.+++++.++++++++|++|+++|||++.+......++..++..++.
T Consensus 129 ~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~ 208 (430)
T d1qfma1 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (430)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred ceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCCcc
Confidence 99999999999999999999999999999999999988888887789999999999999998776554455566778899
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCC-cEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQG-SDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~-~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
+||+|++|+++.+|++|+++++++.+..++..|+||+++++....+... +.+|++|+.. ....+....++..++.+..
T Consensus 209 ~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~ 287 (430)
T d1qfma1 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ-ESNGITGILKWVKLIDNFE 287 (430)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG-SSSSSCSSCCCEEEECSSS
T ss_pred eEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCC-cccccccccceeEeecccc
Confidence 9999999999999999999988777777889999999999887765443 7899999876 2333333445666777666
Q ss_pred ceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 372 HHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 372 ~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
..+.++.++|+.||+.+|.++++++|++++++.+...+|++++++.+..++.......+++|++.+++++.++|.++++.
T Consensus 288 ~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~ 367 (430)
T d1qfma1 288 GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLA 367 (430)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT
T ss_pred cceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECC
Confidence 66667888999999999999999999999998877778999999876666554444444899999999999999999996
Q ss_pred CCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEeeccCCC
Q psy2521 452 TGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRETIVPE 518 (783)
Q Consensus 452 ~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~~~~~~ 518 (783)
+|+. ..+.++ .+++.+++.+++++.++|.++|+++|+++|.+|+ ++++.+.++++++.+++
T Consensus 368 ~~~~-~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl-----~t~~~~~~~~k~~~v~G 429 (430)
T d1qfma1 368 TGAL-LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL-----TKEELEPRVFREVTVKG 429 (430)
T ss_dssp TCCE-EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET-----TSSSCCCEEEEECCCTT
T ss_pred CCcE-EEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEEC-----CCCCcceeeEeccCCCC
Confidence 6665 555544 8888888888888999999999999999999999 57755667888877765
|
| >d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Prolyl oligopeptidase, C-terminal domain domain: Prolyl oligopeptidase, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=3.9e-30 Score=266.68 Aligned_cols=260 Identities=52% Similarity=0.991 Sum_probs=216.6
Q ss_pred CCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 520 ~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
|+++|++|+|+|++.||++|+++|++|+++++++++|+||++|||++.+..+.+......++...|++++..+++++..+
T Consensus 1 ~~~~y~~e~v~~~s~DG~~i~~~l~~P~~~~~~~~~P~iv~~HGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T d1qfma2 1 DASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEY 80 (280)
T ss_dssp CGGGEEEEEEEEECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTT
T ss_pred CcccCEEEEEEEECCCCCEEEEEEEEcCCCCCCCCeEEEEEECCCCcccCCCCcchhhhhhhcccceeeecccccccccc
Confidence 34568899999999999999999999999888899999999999999998888887777777777899999999988888
Q ss_pred ChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
+..+.............++...++.+...+...+..+++++|+|.||+++..++...++++++++..+++.|+.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (280)
T d1qfma2 81 GETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYT 160 (280)
T ss_dssp HHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST
T ss_pred chhhhhcccccccccccchhhhhhhhhhhhcccccccccccccccccchhhhhhhcccchhhheeeeccccchhhhcccc
Confidence 88877777777777778888888988888888999999999999999999999999999999999999999998876555
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCC-CCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPP-NNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~-~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
....+..........+........+|+.++.... ....+||+||+||+.|++||+.|+.+|+++|+++....+..|+|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~pP~LiihG~~D~~Vp~~~s~~l~~aL~~~g~~~~~~~~~~ 240 (280)
T d1qfma2 161 IGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPL 240 (280)
T ss_dssp TGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCE
T ss_pred ccccceecccCCCcccccccccccccccccchhhhcccCCCceEEeecccCCCCCHHHHHHHHHHHHHhhhhhhcCCCcE
Confidence 4444444455555555566677777776655421 024678899999999999999999999999987744434458999
Q ss_pred EEEEeCCCCccCCccchhhhh
Q psy2521 759 LLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 759 ~l~~~~~~gHg~~~~~~~~~~ 779 (783)
+|++|+++||||..+..+.++
T Consensus 241 ~l~~~~~~gHgf~~~~~~~~~ 261 (280)
T d1qfma2 241 LIHVDTKAGHGAGKPTAKVIE 261 (280)
T ss_dssp EEEEESSCCSSTTCCHHHHHH
T ss_pred EEEEeCcCCCCCCCcHHHHHH
Confidence 999999999999877666554
|
| >d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme, C-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acylamino-acid-releasing enzyme, C-terminal donain domain: Acylamino-acid-releasing enzyme, C-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=99.97 E-value=1.7e-30 Score=267.41 Aligned_cols=233 Identities=21% Similarity=0.275 Sum_probs=194.6
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
..++.++|+|.||++|+++++.|++. .++.|+||++|||++.+....|.... ..|+++||+|+.+|+||.+++|..|
T Consensus 10 ~~~~~v~~~s~dG~~i~~~l~~p~~~--~~~~Pviv~~HGG~~~~~~~~~~~~~-~~la~~G~~v~~~d~r~~~~~g~~~ 86 (260)
T d2hu7a2 10 AGSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWDTFA-ASLAAAGFHVVMPNYRGSTGYGEEW 86 (260)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEETTS--CSSEEEEEEECSSSSCCCCSSCCHHH-HHHHHHTCEEEEECCTTCSSSCHHH
T ss_pred CceEEEEEECCCCCEEEEEEEeCCCC--CCCceEEEEECCCCccCCCccccHHH-HHHHhhccccccceeeecccccccc
Confidence 46888999999999999999999874 47889999999998887777787654 4455579999999999999999999
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY 683 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~ 683 (783)
............++|+.++++||++++ ++.+++|+|+|+||++++.++..+|+.|+++++.+|+.|+......+..
T Consensus 87 ~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~~~~~i~g~s~gg~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~~~-- 162 (260)
T d2hu7a2 87 RLKIIGDPCGGELEDVSAAARWARESG--LASELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDA-- 162 (260)
T ss_dssp HHTTTTCTTTHHHHHHHHHHHHHHHTT--CEEEEEEEEETHHHHHHHHHHHHSTTSSSEEEEESCCCCHHHHHHTCCH--
T ss_pred ccccccccchhhhhhhccccccccccc--ccceeeccccccccccccchhccCCcccccccccccchhhhhhhccccc--
Confidence 998887777888999999999999874 6789999999999999999999999999999999999998765443221
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEe
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 763 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~ 763 (783)
+...+.........+.+...+|+.+++. +.+| +||+||+.|++||+.++.+++++|++. |+++++.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~liihG~~D~~vp~~~~~~~~~~l~~~-------~~~~~~~~~ 230 (260)
T d2hu7a2 163 AFRNFIEQLTGGSREIMRSRSPINHVDR----IKEP-LALIHPQNDSRTPLKPLLRLMGELLAR-------GKTFEAHII 230 (260)
T ss_dssp HHHHHHHHHHCSCHHHHHHTCGGGCGGG----CCSC-EEEEEETTCSSSCSHHHHHHHHHHHHT-------TCCEEEEEE
T ss_pred ccccccccccccccccccccchhhcccc----cCCC-ceeeecccCceecHHHHHHHHHHHHHC-------CCCeEEEEE
Confidence 1111110000112355778999999876 6777 999999999999999999999999999 899999999
Q ss_pred CCCCccCCccch
Q psy2521 764 QDAGHGQGKALD 775 (783)
Q Consensus 764 ~~~gHg~~~~~~ 775 (783)
+++||++...++
T Consensus 231 ~g~~H~~~~~e~ 242 (260)
T d2hu7a2 231 PDAGHAINTMED 242 (260)
T ss_dssp TTCCSSCCBHHH
T ss_pred CcCCCCCCChHh
Confidence 999999976554
|
| >d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26, C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl peptidase IV/CD26, C-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.97 E-value=6.3e-30 Score=262.75 Aligned_cols=235 Identities=17% Similarity=0.181 Sum_probs=195.1
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcHH-HHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSIS-RCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
..|++.+...||+++.+.|+.|+++++.+++|+||++|||++... ...+... ...+++++||+|+.+|+||++++|..
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~lP~~~~~~kk~P~iv~~HGGp~~~~~~~~~~~~~~~~~~a~~g~~V~~~d~rg~~~~~~~ 81 (258)
T d2bgra2 2 PSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDK 81 (258)
T ss_dssp CEEEEEEEEETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHH
T ss_pred CceeEEEEEeCCcEEEEEEEECCCcCCCCCeeEEEEEcCCCCcccCCCccCcCHHHHHHhcCCcEEEeecccccCCcchH
Confidence 478899999999999999999999988889999999999855432 2223222 23456778999999999999999999
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAY 682 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~ 682 (783)
|.......++....+|+.+++++++++..+|+++|+++|+|+||.+++.++..+|++++++++..+......+.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~i~i~G~S~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 157 (258)
T d2bgra2 82 IMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS----V 157 (258)
T ss_dssp HHGGGTTCTTSHHHHHHHHHHHHHTTSSSEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH----H
T ss_pred HHHhhhhhhhhHHHHHHHHHHHHhhhhcccccccccccCcchhhcccccccccCCCcceEEEEeecccccccccc----c
Confidence 999888878788899999999999999999999999999999999999999999999999999998776654332 1
Q ss_pred cchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEE
Q psy2521 683 YSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRV 762 (783)
Q Consensus 683 ~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~ 762 (783)
.+....|.+......+.+..++|+.++.. +..+|+|++||+.|++||+.++.+++++|+++ |+++++.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~li~hG~~D~~Vp~~~s~~~~~~l~~~-------g~~~~~~~ 226 (258)
T d2bgra2 158 YTERYMGLPTPEDNLDHYRNSTVMSRAEN----FKQVEYLLIHGTADDNVHFQQSAQISKALVDV-------GVDFQAMW 226 (258)
T ss_dssp HHHHHHCCCSTTTTHHHHHHSCSGGGGGG----GGGSEEEEEEETTCSSSCTHHHHHHHHHHHHH-------TCCCEEEE
T ss_pred ccchhcccccchhhHHHhhcccccccccc----cccCChheeeecCCCcccHHHHHHHHHHHHHC-------CCCEEEEE
Confidence 12234455544444566788999888775 44345999999999999999999999999999 99999999
Q ss_pred eCCCCccCCccc
Q psy2521 763 EQDAGHGQGKAL 774 (783)
Q Consensus 763 ~~~~gHg~~~~~ 774 (783)
|++++|++....
T Consensus 227 ~~g~~H~~~~~~ 238 (258)
T d2bgra2 227 YTDEDHGIASST 238 (258)
T ss_dssp ETTCCTTCCSHH
T ss_pred ECCCCCCCCCCc
Confidence 999999986544
|
| >d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: DPP6 catalytic domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=9.9e-30 Score=261.33 Aligned_cols=223 Identities=18% Similarity=0.225 Sum_probs=177.5
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHH-HHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSIS-RCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
.||.+|+++++.|++++.++++|+||++|||++.. ....|... ...+|+++||+|+++|+||++++|.+|........
T Consensus 10 ~dg~~l~~~l~~P~~~~~~~k~Pviv~~HGGp~~~~~~~~~~~~~~~~~la~~G~~vv~~d~rGs~~~g~~~~~~~~~~~ 89 (258)
T d1xfda2 10 IDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRL 89 (258)
T ss_dssp ETTEEECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHHHTTTTCT
T ss_pred eCCeEEEEEEEECCCcCCCCceeEEEEEcCCccccCcCCCcCcchHHHHHhcCCcEEEEeccccccccchhHhhhhhccc
Confidence 49999999999999988888899999999986543 33444432 34567888999999999999999999998887777
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhhhcccccccccchhh
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFNKFTIAYYSESE 687 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~~~~~~~~~~~~~~~ 687 (783)
+....+|++++++||+++..+|++||+++|+|+||++++.++...++ .|++.+...|+..+..... ......
T Consensus 90 g~~~~~d~~~~i~~l~~~~~id~~ri~v~G~S~GG~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 165 (258)
T d1xfda2 90 GLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS----AFSERY 165 (258)
T ss_dssp TTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH----HHHHHH
T ss_pred hhHHHHHHHHhhhhhcccccccccceeccccCchHHHHHHHHhcCCcccceeeeeeeccccceeeecccc----cccccc
Confidence 77889999999999999999999999999999999999998877665 6788888888765533211 111123
Q ss_pred hCCCC-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC
Q psy2521 688 FGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDA 766 (783)
Q Consensus 688 ~g~p~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~ 766 (783)
++.+. +.+ .+...||..++.. ...+|+|++||+.|++||+.++.+++++|++. |.++++.+||++
T Consensus 166 ~~~~~~~~~---~~~~~s~~~~~~~----~~~~p~Li~hG~~D~~vp~~~s~~~~~~l~~~-------~~~~~~~~~p~~ 231 (258)
T d1xfda2 166 LGLHGLDNR---AYEMTKVAHRVSA----LEEQQFLIIHPTADEKIHFQHTAELITQLIRG-------KANYSLQIYPDE 231 (258)
T ss_dssp HCCCSSCCS---STTTTCTHHHHTS----CCSCEEEEEEETTCSSSCHHHHHHHHHHHHHT-------TCCCEEEEETTC
T ss_pred ccccccchH---Hhhccchhhhhhh----hhcccccccccCCCCCcCHHHHHHHHHHHHHC-------CCCEEEEEECCC
Confidence 34442 222 2345666666665 33445999999999999999999999999998 899999999999
Q ss_pred CccCCccc
Q psy2521 767 GHGQGKAL 774 (783)
Q Consensus 767 gHg~~~~~ 774 (783)
||++....
T Consensus 232 ~H~~~~~~ 239 (258)
T d1xfda2 232 SHYFTSSS 239 (258)
T ss_dssp CSSCCCHH
T ss_pred CCCCCCCc
Confidence 99986543
|
| >d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Acetyl xylan esterase TM0077 species: Thermotoga maritima [TaxId: 2336]
Probab=99.88 E-value=1.7e-22 Score=213.48 Aligned_cols=231 Identities=18% Similarity=0.160 Sum_probs=166.4
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
.+.+.++.++|++.||.+|+++++.|++. .++.|+||++||+.+....+.. ...|. ++||+|+++|+||.|..+
T Consensus 50 ~~~~~~~~v~~~s~dG~~l~~~l~~P~~~--~~~~P~Vv~~hG~~~~~~~~~~---~~~~a-~~G~~v~~~D~rG~G~s~ 123 (322)
T d1vlqa_ 50 LKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFPHD---WLFWP-SMGYICFVMDTRGQGSGW 123 (322)
T ss_dssp CSSEEEEEEEEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCCCGGG---GCHHH-HTTCEEEEECCTTCCCSS
T ss_pred CCCeEEEEEEEECCCCcEEEEEEEeccCC--CCCccEEEEecCCCCCcCcHHH---HHHHH-hCCCEEEEeeccccCCCC
Confidence 45678899999999999999999999874 5789999999997665543322 22444 579999999999977655
Q ss_pred hhHHhhcccc---------------------CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 601 EDWHNAGRLL---------------------KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 601 ~~~~~~g~~~---------------------~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
.......... .....+.|++++++++..+..+|++|++++|+|+||++++.++...| .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~a~~~~~~~~~~d~~ri~~~G~S~GG~~a~~~~~~~~-~ 202 (322)
T d1vlqa_ 124 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-K 202 (322)
T ss_dssp SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-S
T ss_pred CCccccccccccccccccchhhhchhhhhhhhhHHHHHHHHHHHHHHHhcCCcCchhccccccccchHHHHHHHhcCC-C
Confidence 4322111100 00123689999999999999999999999999999999999998876 4
Q ss_pred eeEEEEcCCcchhhhc-ccccccccch--hhh--CCC-CCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCC
Q psy2521 660 YGAALILVGALDMLRF-NKFTIAYYSE--SEF--GSP-NNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP 733 (783)
Q Consensus 660 f~a~i~~~~~~d~~~~-~~~~~~~~~~--~~~--g~p-~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~ 733 (783)
|+++++.+|..+.... ........+. ..+ ..+ ......+.+..+||..++.. +++| +|++||.+|.+||
T Consensus 203 ~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~----i~~P-~Lv~~G~~D~~vp 277 (322)
T d1vlqa_ 203 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAAR----AKIP-ALFSVGLMDNICP 277 (322)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTT----CCSC-EEEEEETTCSSSC
T ss_pred ccEEEEeCCccccHHHHHhhccccchhhHHhhhhcCcchhhhHHHHhhhhhHHHHHhc----CCCC-EEEEEeCCCCCcC
Confidence 6788888876543322 1111111111 011 122 23344556677899887776 6777 9999999999999
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
+.++.++++++ +.+.++++||++||++...
T Consensus 278 ~~~~~~~~~~~----------~~~~~l~~~p~~~H~~~~~ 307 (322)
T d1vlqa_ 278 PSTVFAAYNYY----------AGPKEIRIYPYNNHEGGGS 307 (322)
T ss_dssp HHHHHHHHHHC----------CSSEEEEEETTCCTTTTHH
T ss_pred HHHHHHHHHHC----------CCCeEEEEECCCCCCCccc
Confidence 99987766543 5578999999999987643
|
| >d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetyl xylan esterase-like domain: Cephalosporin C deacetylase species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=3.6e-22 Score=209.97 Aligned_cols=238 Identities=16% Similarity=0.065 Sum_probs=166.6
Q ss_pred CCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCC
Q psy2521 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGEL 599 (783)
Q Consensus 520 ~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 599 (783)
....+.+++++|++.||.+|+++++.|++ .++.|+||++||+.+.... |.... ..|+++||+|+++|+||.|+.
T Consensus 50 ~~~~~~~~~v~~~~~dg~~i~~~l~~P~~---~~~~P~vv~~HG~~~~~~~--~~~~~-~~la~~Gy~vi~~D~rG~G~s 123 (318)
T d1l7aa_ 50 PADGVKVYRLTYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASYDG--EIHEM-VNWALHGYATFGMLVRGQQRS 123 (318)
T ss_dssp SCSSEEEEEEEEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCSGG--GHHHH-HHHHHTTCEEEEECCTTTSSS
T ss_pred CCCCeEEEEEEEECCCCcEEEEEEEecCC---CCCceEEEEecCCCCCccc--hHHHH-HHHHHCCCEEEEEeeCCCCCC
Confidence 34567899999999999999999999987 5789999999998776543 33333 445567999999999998876
Q ss_pred ChhHHhhccccC--------------CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 600 GEDWHNAGRLLK--------------KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 600 G~~~~~~g~~~~--------------~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
+..+........ ....+.|...++++|..++.+++++|+++|+|+||.+++.++...++. +++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~v~~~~i~~~G~s~Gg~~~~~~~~~~~~~-~~~~~ 202 (318)
T d1l7aa_ 124 EDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIP-KAAVA 202 (318)
T ss_dssp CCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSCC-SEEEE
T ss_pred CCCcccchhhhhcchhhchhhhhhhhhHHHHHHHHHHHHHHHhcccccCcceEEEeeccccHHHHHHhhcCccc-ceEEE
Confidence 644322111110 112367899999999999999999999999999999999999998865 45555
Q ss_pred cCCcc-hhhhcccccccccc------hhhhCCCC-CHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHH
Q psy2521 666 LVGAL-DMLRFNKFTIAYYS------ESEFGSPN-NKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHS 737 (783)
Q Consensus 666 ~~~~~-d~~~~~~~~~~~~~------~~~~g~p~-~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~ 737 (783)
.+|.. ++...........+ ....+... ..+.+..+..+++...+++ ++.| +||+||.+|..||+.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~Lii~G~~D~~vp~~~~ 277 (318)
T d1l7aa_ 203 DYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADR----VKVP-VLMSIGLIDKVTPPSTV 277 (318)
T ss_dssp ESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGG----CCSC-EEEEEETTCSSSCHHHH
T ss_pred eccccccHHHHhhcccccccchhhhhhhcccccccccccccccccccccccccc----CCCC-EEEEEECCCCCcCHHHH
Confidence 55543 33322211111111 11112221 1222333444555555554 6677 99999999999999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 738 YKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 738 ~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
.+++++| +.+.++.+++++||.+.......+.
T Consensus 278 ~~~~~~l----------~~~~~l~~~~~~gH~~~~~~~~~~~ 309 (318)
T d1l7aa_ 278 FAAYNHL----------ETKKELKVYRYFGHEYIPAFQTEKL 309 (318)
T ss_dssp HHHHHHC----------CSSEEEEEETTCCSSCCHHHHHHHH
T ss_pred HHHHHHc----------CCCcEEEEECCCCCCCcHHHHHHHH
Confidence 8887765 3467899999999998765555443
|
| >d2jbwa1 c.69.1.41 (A:8-367) 2,6-dihydropseudooxynicotine hydrolase {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: 2,6-dihydropseudooxynicotine hydrolase-like domain: 2,6-dihydropseudooxynicotine hydrolase species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=99.83 E-value=5.3e-20 Score=197.32 Aligned_cols=220 Identities=18% Similarity=0.106 Sum_probs=154.4
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
....+++.++. ||..|+++++.|++ .++.|+||++||..+.... +. .+...|.++||+|+.+|+||.|+....
T Consensus 103 ~~~~e~v~ip~-dg~~l~g~l~~P~~---~~~~P~Vi~~hG~~~~~e~--~~-~~~~~l~~~G~~vl~~D~~G~G~s~~~ 175 (360)
T d2jbwa1 103 SPPAERHELVV-DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTKEE--SF-QMENLVLDRGMATATFDGPGQGEMFEY 175 (360)
T ss_dssp SSCEEEEEEEE-TTEEEEEEEECCSS---SCCEEEEEEECCSSCCTTT--TH-HHHHHHHHTTCEEEEECCTTSGGGTTT
T ss_pred CCCeEEeecCc-CCcccceEEEecCC---CCCceEEEEeCCCCccHHH--HH-HHHHHHHhcCCEEEEEccccccccCcc
Confidence 45678888885 89999999999976 5789999999997554332 22 334556667999999999996644311
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc--
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI-- 680 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~-- 680 (783)
.........++.++++||.....+|++||+|+|+|+||++++.++...|+ ++++|+..|+.|+........
T Consensus 176 ------~~~~~~~~~~~~~v~d~l~~~~~vd~~rI~l~G~S~GG~~Al~~A~~~pr-i~a~V~~~~~~~~~~~~~~~~~~ 248 (360)
T d2jbwa1 176 ------KRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAACEPR-LAACISWGGFSDLDYWDLETPLT 248 (360)
T ss_dssp ------CCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCSTTGGGSCHHH
T ss_pred ------ccccccHHHHHHHHHHHHHhcccccccceeehhhhcccHHHHHHhhcCCC-cceEEEEcccccHHHHhhhhhhh
Confidence 11112334566778999999989999999999999999999999998885 699999999888754322110
Q ss_pred cccchhhhCCCCCHHH-HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEE
Q psy2521 681 AYYSESEFGSPNNKTH-FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLL 759 (783)
Q Consensus 681 ~~~~~~~~g~p~~~~~-~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 759 (783)
...|....+.+...+. ......++....+.+ +++| +||+||++|. ||+.++.++++++... .+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-~Lii~G~~D~-vp~~~~~~l~~~~~~~---------~~~ 313 (360)
T d2jbwa1 249 KESWKYVSKVDTLEEARLHVHAALETRDVLSQ----IACP-TYILHGVHDE-VPLSFVDTVLELVPAE---------HLN 313 (360)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGG----CCSC-EEEEEETTSS-SCTHHHHHHHHHSCGG---------GEE
T ss_pred hHHHHHhccCCchHHHHHHHHhhcchhhhHhh----CCCC-EEEEEeCCCC-cCHHHHHHHHHhcCCC---------CeE
Confidence 1112222233332222 222333444333443 6777 9999999997 7999999998877543 567
Q ss_pred EEEeCCCCccCC
Q psy2521 760 LRVEQDAGHGQG 771 (783)
Q Consensus 760 l~~~~~~gHg~~ 771 (783)
+.++++++|...
T Consensus 314 l~~~~~g~H~~~ 325 (360)
T d2jbwa1 314 LVVEKDGDHCCH 325 (360)
T ss_dssp EEEETTCCGGGG
T ss_pred EEEECCCCcCCC
Confidence 889999999643
|
| >d2pbla1 c.69.1.2 (A:1-261) Uncharacterized protein TM1040_2492 {Silicibacter sp. tm1040 [TaxId: 292414]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Uncharacterized protein TM1040 2492 species: Silicibacter sp. tm1040 [TaxId: 292414]
Probab=99.81 E-value=7.4e-20 Score=186.53 Aligned_cols=209 Identities=11% Similarity=0.063 Sum_probs=146.0
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g 607 (783)
.+.|-..+.. .+-|+.|++ .+.|+|||+|||+....+......+...|+++||+|+.+|||.+++.. |
T Consensus 41 dv~Yg~~~~~--~lDiy~P~~----~~~P~vv~iHGG~w~~g~~~~~~~~a~~l~~~G~~Vv~~~YRl~p~~~--~---- 108 (261)
T d2pbla1 41 NLSYGEGDRH--KFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR--I---- 108 (261)
T ss_dssp EEESSSSTTC--EEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC--H----
T ss_pred CcCCCCCcCe--EEEEeccCC----CCCCeEEEECCCCCccCChhHhhhHHHHHhcCCceeeccccccccccc--C----
Confidence 4555333333 344667765 467999999999765544332222345566679999999999866532 2
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCC------CceeEEEEcCCcchhhhccccccc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRP------ELYGAALILVGALDMLRFNKFTIA 681 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p------~lf~a~i~~~~~~d~~~~~~~~~~ 681 (783)
....+|+.++++|+.++. ++||+|+|+|+||+|++.++...+ ..++++++..|+.|+.......
T Consensus 109 -----p~~~~d~~~a~~~~~~~~---~~rI~l~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 178 (261)
T d2pbla1 109 -----SEITQQISQAVTAAAKEI---DGPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS-- 178 (261)
T ss_dssp -----HHHHHHHHHHHHHHHHHS---CSCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST--
T ss_pred -----chhHHHHHHHHHHHHhcc---cCceEEEEcchHHHHHHHHhcCcccccchhhchhhhhccccccccchhhhhh--
Confidence 234689999999999874 589999999999999988876543 2578999999998876533211
Q ss_pred ccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEE
Q psy2521 682 YYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLR 761 (783)
Q Consensus 682 ~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~ 761 (783)
....++ .++ +.....||+.++.. .. ||+||+||++|..|+..|+.+|+++|+.. ..
T Consensus 179 --~~~~~~--~~~---~~~~~~SP~~~~~~----~~-~P~li~~G~~D~~~~~~qs~~~~~~l~~~------------~~ 234 (261)
T d2pbla1 179 --MNEKFK--MDA---DAAIAESPVEMQNR----YD-AKVTVWVGGAERPAFLDQAIWLVEAWDAD------------HV 234 (261)
T ss_dssp --THHHHC--CCH---HHHHHTCGGGCCCC----CS-CEEEEEEETTSCHHHHHHHHHHHHHHTCE------------EE
T ss_pred --hccccc--CCH---HHHHHhCchhhccc----CC-CeEEEEEecCCCchHHHHHHHHHHHhCCC------------ce
Confidence 111222 223 33468899999876 34 45999999999999999999999998644 56
Q ss_pred EeCCCCcc-----CCccchhhhhccC
Q psy2521 762 VEQDAGHG-----QGKALDIELKNPM 782 (783)
Q Consensus 762 ~~~~~gHg-----~~~~~~~~~~~~~ 782 (783)
++++++|. +..+.++..+.++
T Consensus 235 ~~~~~~HF~vi~~l~~~~~~l~~~i~ 260 (261)
T d2pbla1 235 IAFEKHHFNVIEPLADPESDLVAVIT 260 (261)
T ss_dssp EETTCCTTTTTGGGGCTTCHHHHHHH
T ss_pred EeCCCCchhHHHhhcCCCcHHHHHHh
Confidence 77999992 2355666555544
|
| >d1jkma_ c.69.1.2 (A:) Carboxylesterase {Bacillus subtilis, brefeldin A esterase [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Bacillus subtilis, brefeldin A esterase [TaxId: 1423]
Probab=99.80 E-value=3.1e-19 Score=191.11 Aligned_cols=233 Identities=15% Similarity=0.093 Sum_probs=153.9
Q ss_pred CCCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc--HHHHHHHHcCCEEEEEecCCCCC
Q psy2521 520 EPTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS--ISRCMFLRHFNGIYAIPNIRGGG 597 (783)
Q Consensus 520 ~~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~RG~g 597 (783)
+...+.+++.++++.||..|++.++.|++. +++.|+|||+|||.......... ......++++|++|+.+|||.+.
T Consensus 73 ~~~~v~~~~~~i~~~dg~~i~~~iy~P~~~--~~~~Pviv~~HGGG~~~gs~~~~~~~~~~~~la~~g~~VvsvdYRla~ 150 (358)
T d1jkma_ 73 DRDDVETSTETILGVDGNEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAW 150 (358)
T ss_dssp CCCCEEEEEEEEECTTSCEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSE
T ss_pred CCCCccEEEEEEeCCCCCEEEEEEEecCCC--CCCCCeEEEecCCeeeeccccccccchHHHHHHhhhheeeeeeecccc
Confidence 345678889999999999999999999874 57899999999994332222111 12345566689999999999964
Q ss_pred CCChhHHhhccccCCcChHHHHHHHHHHHHHcC-CCCCCcEEEEEeChhHHHHHHHHhc-----CCCceeEEEEcCCcch
Q psy2521 598 ELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKK-YTKPKYITIMGGSNGGLLVGACLNQ-----RPELYGAALILVGALD 671 (783)
Q Consensus 598 ~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~-----~p~lf~a~i~~~~~~d 671 (783)
+...+ ......++|+.++++||.++. ..|++||+|+|.|+||.|++.++.. .+..+.+.++.+|+++
T Consensus 151 ~~~pe-------~~~p~~l~D~~~a~~wl~~~~~~~~~~ri~i~G~SAGG~La~~~a~~~~~~~~~~~~~~~~~~~p~~~ 223 (358)
T d1jkma_ 151 TAEGH-------HPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYIS 223 (358)
T ss_dssp ETTEE-------CCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCC
T ss_pred ccccc-------CCCchhhHHHHHHHHHHHHhccccCCccceeecccCchHHHHHHHHHHhhcCCCccccccccccceec
Confidence 33211 122345899999999998752 2578999999999999999877643 2345788899999877
Q ss_pred hhhccc----ccccccchhhhCCCCCHHHHH-HHHhcC--------cccCCCCCC--CCCcCCcEEEEecCCCCCCCcHH
Q psy2521 672 MLRFNK----FTIAYYSESEFGSPNNKTHFH-NLLSYS--------PLHNIKVPP--NNTQYPATLVLTGDHDDRVPPLH 736 (783)
Q Consensus 672 ~~~~~~----~~~~~~~~~~~g~p~~~~~~~-~~~~~s--------p~~~v~~~~--~~~~~P~~Li~~g~~D~~V~~~~ 736 (783)
...... ++....+....+......... ....|. |+...-... ....+||+||++|++|.. ..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~a~~~~~~~lPp~li~~g~~D~l--~~e 301 (358)
T d1jkma_ 224 GGYAWDHERRLTELPSLVENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLPPFVVAVNELDPL--RDE 301 (358)
T ss_dssp CCTTSCHHHHHHHCTHHHHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCCCEEEEEETTCTT--HHH
T ss_pred cccCccchhhcccccchhcccccccchhhhhhHHhhcCCccCCccCccccccccchhhccCCCCEEEEECCCCCC--HHH
Confidence 543211 000000000011111111111 111221 111100000 002568899999999954 478
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 737 SYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 737 ~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
+.+|+++|+++ |+++++.+|++++|+|
T Consensus 302 ~~~~~~~L~~a-------Gv~v~~~~~~g~~Hgf 328 (358)
T d1jkma_ 302 GIAFARRLARA-------GVDVAARVNIGLVHGA 328 (358)
T ss_dssp HHHHHHHHHHT-------TCCEEEEEETTCCTTH
T ss_pred HHHHHHHHHHC-------CCcEEEEEECCCccch
Confidence 99999999999 9999999999999997
|
| >d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Heroin esterase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.79 E-value=5.3e-19 Score=186.21 Aligned_cols=224 Identities=17% Similarity=0.105 Sum_probs=144.4
Q ss_pred CCCCCCeEEEEEEECCCCc-EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCc-CcHHHHHHHHcCCEEEEEecCCCC
Q psy2521 519 FEPTLFQTKQVYFRSKDGT-RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 519 ~~~~~~~~~~~~~~s~dg~-~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
.....+..+++.+++.||. .|++.++.|++. +++.|+|||+|||........ +......++.+.||+|+.+|||+.
T Consensus 43 ~~~~~v~~~~~~~~~~~g~~~i~~~~~~P~~~--~~~~Pvvv~iHGGG~~~g~~~~~~~~~~~la~~~G~~V~~vdYrl~ 120 (317)
T d1lzla_ 43 LSFDGVSLRELSAPGLDGDPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA 120 (317)
T ss_dssp CCCTTEEEEEEEECCSTTCCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCT
T ss_pred CCCCCceEEEEEEecCCCCceEEEEEECCCCC--CCCCcEEEEecCcccccccccccchHHHhHHhhcCCcccccccccc
Confidence 3345667899999999986 699999999873 578999999999844333322 223333444556999999999986
Q ss_pred CCCChhHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCc
Q psy2521 597 GELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGA 669 (783)
Q Consensus 597 g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~ 669 (783)
.+.. ....++|+.+++.|+.++ ..+||+||+|+|+|+||++++.++.+.++ .....+...+.
T Consensus 121 pe~~-----------~~~~~~d~~~~~~~~~~~~~~~g~D~~rI~l~G~SaGg~la~~~~~~~~~~~~~~~~~~~~~~~~ 189 (317)
T d1lzla_ 121 PETT-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPE 189 (317)
T ss_dssp TTSC-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCC
T ss_pred cccc-----------ccccccccccchhHHHHHHHHhCCCHHHEEEEEeccccHHHHHHHhhhhhccccccccccccccc
Confidence 6533 122367999999998664 34799999999999999999988865332 12233333332
Q ss_pred chhhhcc----cccccccc---------hhhhCC----CCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCC
Q psy2521 670 LDMLRFN----KFTIAYYS---------ESEFGS----PNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV 732 (783)
Q Consensus 670 ~d~~~~~----~~~~~~~~---------~~~~g~----p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V 732 (783)
.+..... .+.....+ ...++. +.++.. ....+|...... ...||+||+||+.|.
T Consensus 190 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~pp~li~~g~~D~-- 260 (317)
T d1lzla_ 190 LDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDV---SIYAAPSRATDL----TGLPPTYLSTMELDP-- 260 (317)
T ss_dssp CCTTCCSHHHHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCC---CTTTCGGGCSCC----TTCCCEEEEEETTCT--
T ss_pred ccccccccccccccccchhhhhhhHHHHhhhccccccCCCCchh---ccccCchhhhhc----cCCCCeEEEECCCCC--
Confidence 2221100 00000000 000110 001000 001112211111 356779999999994
Q ss_pred CcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 733 PPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 733 ~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
...++.+|+++|+++ |+++++++|++++|+|.
T Consensus 261 l~~~~~~~~~~L~~~-------G~~v~~~~~~g~~H~f~ 292 (317)
T d1lzla_ 261 LRDEGIEYALRLLQA-------GVSVELHSFPGTFHGSA 292 (317)
T ss_dssp THHHHHHHHHHHHHT-------TCCEEEEEETTCCTTGG
T ss_pred CHHHHHHHHHHHHHC-------CCCEEEEEECcCccCCc
Confidence 567999999999999 99999999999999985
|
| >d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Dienelactone hydrolase domain: Dienelactone hydrolase species: Pseudomonas sp., B13 [TaxId: 306]
Probab=99.79 E-value=4.9e-19 Score=177.73 Aligned_cols=195 Identities=17% Similarity=0.194 Sum_probs=139.0
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
.|+|+|++.||.++.+++..|++ ++.|+||++|+++|.... ...+...|+++||+|+++|+.|+++++..+..
T Consensus 3 ~e~v~~~~~dg~~~~a~~~~P~~----~~~P~vl~~h~~~G~~~~---~~~~a~~lA~~Gy~vl~pd~~~~~~~~~~~~~ 75 (233)
T d1dina_ 3 TEGISIQSYDGHTFGALVGSPAK----APAPVIVIAQEIFGVNAF---MRETVSWLVDQGYAAVCPDLYARQAPGTALDP 75 (233)
T ss_dssp CTTCCEECTTSCEECEEEECCSS----SSEEEEEEECCTTBSCHH---HHHHHHHHHHTTCEEEEECGGGGTSTTCBCCT
T ss_pred ceEEEEEcCCCCEEEEEEECCCC----CCceEEEEeCCCCCCCHH---HHHHHHHHHhcCCcceeeeeccCCCcCcccCh
Confidence 45678999999999999999975 689999999988775432 23345667778999999999876665432110
Q ss_pred -------h----ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh
Q psy2521 606 -------A----GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674 (783)
Q Consensus 606 -------~----g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~ 674 (783)
. ...........|+.+++++|...+. +.+||+++|+|+||.++..++.. +. +.++++..|..-.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~d~~aa~~~l~~~~~-~~~~i~~~G~s~Gg~~a~~~a~~-~~-~~~~~~~~~~~~~-- 150 (233)
T d1dina_ 76 QDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPY-SNGKVGLVGYCLGGALAFLVAAK-GY-VDRAVGYYGVGLE-- 150 (233)
T ss_dssp TSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTT-EEEEEEEEEETHHHHHHHHHHHH-TC-SSEEEEESCSCGG--
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhCCC-CCCceEEEEecccccceeecccc-cc-cceeccccccccc--
Confidence 0 0011123457899999999988775 45899999999999999998876 43 3555554432100
Q ss_pred cccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCC
Q psy2521 675 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQ 754 (783)
Q Consensus 675 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 754 (783)
++...+.. ++.| +|++||++|++||+.+..++.+.++ .
T Consensus 151 -----------------------------~~~~~~~~----i~~P-vl~~~G~~D~~vp~e~~~~~~~~~~-~------- 188 (233)
T d1dina_ 151 -----------------------------KQLNKVPE----VKHP-ALFHMGGQDHFVPAPSRQLITEGFG-A------- 188 (233)
T ss_dssp -----------------------------GGGGGGGG----CCSC-EEEEEETTCTTSCHHHHHHHHHHHT-T-------
T ss_pred -----------------------------cchhhhhc----cCCc-ceeeecccccCCCHHHHHHHHHHHh-c-------
Confidence 00011111 3445 9999999999999988777766554 4
Q ss_pred CCcEEEEEeCCCCccCCccc
Q psy2521 755 KNPLLLRVEQDAGHGQGKAL 774 (783)
Q Consensus 755 ~~~~~l~~~~~~gHg~~~~~ 774 (783)
+.++++.+|++++|||..+.
T Consensus 189 ~~~~~~~~y~ga~HgF~~~~ 208 (233)
T d1dina_ 189 NPLLQVHWYEEAGHSFARTS 208 (233)
T ss_dssp CTTEEEEEETTCCTTTTCTT
T ss_pred CCCEEEEEECCCCcCCCCCC
Confidence 67899999999999996543
|
| >d1jjia_ c.69.1.2 (A:) Carboxylesterase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.78 E-value=1.1e-18 Score=183.05 Aligned_cols=212 Identities=16% Similarity=0.121 Sum_probs=149.8
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHHHHHHHcCCEEEEEecCCCCCCCCh
Q psy2521 523 LFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISRCMFLRHFNGIYAIPNIRGGGELGE 601 (783)
Q Consensus 523 ~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 601 (783)
...++.+++++.+| .|++.++.|++ +.|+|||+|||....... .+......++++.|++|+.+|||++.++.
T Consensus 53 ~~~~~~~~i~~~~g-~i~~~iy~P~~-----~~P~il~iHGGg~~~g~~~~~~~~~~~l~~~~g~~Vv~v~Yrlap~~~- 125 (311)
T d1jjia_ 53 VERVEDRTIKGRNG-DIRVRVYQQKP-----DSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK- 125 (311)
T ss_dssp CSEEEEEEEEETTE-EEEEEEEESSS-----SEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-
T ss_pred cceEEEEEEeCCCC-cEEEEEEcCCC-----CceEEEEEcCCCCccCChhhhhhhhhhhhhcCCcEEEEeccccccccc-
Confidence 34678889998888 79999999863 469999999985443333 23333344556569999999999976643
Q ss_pred hHHhhccccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC----CCceeEEEEcCCcchhhh
Q psy2521 602 DWHNAGRLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR----PELYGAALILVGALDMLR 674 (783)
Q Consensus 602 ~~~~~g~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~----p~lf~a~i~~~~~~d~~~ 674 (783)
-...++|+.++++|+.++ ..+|++||+|+|.|+||+|++.++... .....+.++..|.+|+..
T Consensus 126 ----------~p~~~~d~~~a~~~~~~~~~~~~~d~~ri~v~G~SaGG~la~~~~~~~~~~~~~~~~~~~l~~p~~~~~~ 195 (311)
T d1jjia_ 126 ----------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVA 195 (311)
T ss_dssp ----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSS
T ss_pred ----------cchhhhhhhhhhhHHHHhHHHhCcChhHEEEEeeecCCcceeechhhhhhccccccceeeeecceeeecc
Confidence 122468999999999775 358999999999999999988775332 336788899999888653
Q ss_pred cccccccccchhhhCC--C-CCHHHHH-------------HHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHH
Q psy2521 675 FNKFTIAYYSESEFGS--P-NNKTHFH-------------NLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSY 738 (783)
Q Consensus 675 ~~~~~~~~~~~~~~g~--p-~~~~~~~-------------~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~ 738 (783)
... ....++. + ....... .....||+..... ..||+||+||+.|.. ..++.
T Consensus 196 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-----~~pP~li~~g~~D~l--~d~~~ 262 (311)
T d1jjia_ 196 PTP------SLLEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIFADLE-----NLPPALIITAEYDPL--RDEGE 262 (311)
T ss_dssp CCH------HHHHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCT-----TCCCEEEEEEEECTT--HHHHH
T ss_pred Ccc------cccccccccccccHHHhhhhhhhcccccccccccccchhhcccc-----cCCCEEEEEcCCCCC--hHHHH
Confidence 211 1111111 0 0111000 0012467665433 567899999999965 46899
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 739 KFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 739 ~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.|+++|+++ |+++++++|++++|+|.
T Consensus 263 ~~~~~L~~~-------Gv~v~~~~~~g~~H~F~ 288 (311)
T d1jjia_ 263 VFGQMLRRA-------GVEASIVRYRGVLHGFI 288 (311)
T ss_dssp HHHHHHHHT-------TCCEEEEEEEEEETTGG
T ss_pred HHHHHHHHC-------CCCEEEEEECCCCCccc
Confidence 999999999 99999999999999974
|
| >d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Myristoyl-ACP-specific thioesterase species: Vibrio harveyi [TaxId: 669]
Probab=99.77 E-value=1.2e-18 Score=182.07 Aligned_cols=221 Identities=14% Similarity=0.123 Sum_probs=145.0
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCCh-hHH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGE-DWH 604 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~-~~~ 604 (783)
+....+++.||..++++.+.|++. ...+.|+||++||..+... .|. .+..+|.++||.|+.+|+||+++... .+.
T Consensus 4 ~~~h~~~~~dg~~l~~w~~~p~~~-~~~~~~~Vvi~HG~~~~~~--~~~-~~a~~L~~~G~~Vi~~D~rGh~G~S~g~~~ 79 (302)
T d1thta_ 4 TIAHVLRVNNGQELHVWETPPKEN-VPFKNNTILIASGFARRMD--HFA-GLAEYLSTNGFHVFRYDSLHHVGLSSGSID 79 (302)
T ss_dssp CEEEEEEETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGGGG--GGH-HHHHHHHTTTCCEEEECCCBCC--------
T ss_pred eeeeEEEcCCCCEEEEEEecCcCC-CCCCCCEEEEeCCCcchHH--HHH-HHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 455667889999999999999874 3457899999999655432 343 45577777899999999999533321 111
Q ss_pred hhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccc
Q psy2521 605 NAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYS 684 (783)
Q Consensus 605 ~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~ 684 (783)
+ .......+|+.++++||.+++ +++|+|+|+||||.+++.++... .++++|+.+|+.++..+.........
T Consensus 80 ~----~~~~~~~~dl~~vi~~l~~~~---~~~i~lvG~SmGG~ial~~A~~~--~v~~li~~~g~~~~~~~~~~~~~~~~ 150 (302)
T d1thta_ 80 E----FTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISDL--ELSFLITAVGVVNLRDTLEKALGFDY 150 (302)
T ss_dssp C----CCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTTS--CCSEEEEESCCSCHHHHHHHHHSSCG
T ss_pred C----CCHHHHHHHHHHHHHhhhccC---CceeEEEEEchHHHHHHHHhccc--ccceeEeecccccHHHHHHHHHhhcc
Confidence 1 111134678999999998763 56899999999999998887643 36889999998877543211000000
Q ss_pred ----hhhh-------CCCCCHHHHH--HHHhc-----CcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHh
Q psy2521 685 ----ESEF-------GSPNNKTHFH--NLLSY-----SPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQE 746 (783)
Q Consensus 685 ----~~~~-------g~p~~~~~~~--~~~~~-----sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~ 746 (783)
.... +.......+. .+... ++...++. +..| +|++||++|+.|++.++.++++.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----i~~P-vLii~G~~D~~V~~~~~~~l~~~i~s 225 (302)
T d1thta_ 151 LSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVAN----TSVP-LIAFTANNDDWVKQEEVYDMLAHIRT 225 (302)
T ss_dssp GGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTT----CCSC-EEEEEETTCTTSCHHHHHHHHTTCTT
T ss_pred chhhhhhccccccccccchhhHHHHHHHHHhHHHHHHHHHHHHhh----cCCC-EEEEEeCCCCccCHHHHHHHHHhCCC
Confidence 0000 0000011110 00000 12233343 6677 99999999999999999988887653
Q ss_pred hhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 747 KIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 747 ~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
...++.+++++||.++..
T Consensus 226 ---------~~~kl~~~~g~~H~l~e~ 243 (302)
T d1thta_ 226 ---------GHCKLYSLLGSSHDLGEN 243 (302)
T ss_dssp ---------CCEEEEEETTCCSCTTSS
T ss_pred ---------CCceEEEecCCCcccccC
Confidence 357899999999998754
|
| >d1mpxa2 c.69.1.21 (A:24-404) Alpha-amino acid ester hydrolase {Xanthomonas citri [TaxId: 346]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Xanthomonas citri [TaxId: 346]
Probab=99.77 E-value=3.5e-18 Score=184.29 Aligned_cols=152 Identities=13% Similarity=0.145 Sum_probs=118.4
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecC--CCCCc---cCCcCc---HHHHHHHHcCCEEEEEec
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYG--GYGVS---VLPTFS---ISRCMFLRHFNGIYAIPN 592 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hG--g~~~~---~~~~~~---~~~~~~l~~~G~~v~~~~ 592 (783)
...|..++++++.+||++|.+.|++|++ .++.|+||..|+ +.+.. ..+... .....+|+++||+|+++|
T Consensus 19 ~~~~~~~~v~i~~rDG~~L~~~v~~P~~---~~~~P~il~~~pYg~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~d 95 (381)
T d1mpxa2 19 SNDYIKREVMIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 95 (381)
T ss_dssp TCSEEEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred ccCceEEEEEEECCCCCEEEEEEEEeCC---CCCccEEEEEccCCCCCcccccccccccccchhHHHHHHhCCCEEEEEe
Confidence 3467888999999999999999999987 578999999875 21111 111110 112345666899999999
Q ss_pred CCCCCCCChhHHhhcc-----ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 593 IRGGGELGEDWHNAGR-----LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 593 ~RG~g~~G~~~~~~g~-----~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
.||.|..+..|...+. .....+...|+.++++||.++..++.+||+++|+|+||++++++|.+.|..++|+|+.+
T Consensus 96 ~RG~g~S~G~~~~~~~~~~~~~~~~~~~~~D~~~~i~w~~~~~~~~~~~vg~~G~SygG~~~~~~a~~~~~~l~a~v~~~ 175 (381)
T d1mpxa2 96 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPHPALKVAVPES 175 (381)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCCTTEEEEEEES
T ss_pred cCccCCCCCceeccchhhhhcccchhHHHHHHHHHHHHHhhcCCcCccceeeecccHHHHHHHHHHhccccccceeeeec
Confidence 9998777665543221 22345678999999999999988888999999999999999999999999999999999
Q ss_pred Ccchhhhc
Q psy2521 668 GALDMLRF 675 (783)
Q Consensus 668 ~~~d~~~~ 675 (783)
|+.|....
T Consensus 176 ~~~d~~~~ 183 (381)
T d1mpxa2 176 PMIDGWMG 183 (381)
T ss_dssp CCCCTTTT
T ss_pred cccccccc
Confidence 99997654
|
| >d2fuka1 c.69.1.36 (A:3-220) XC6422 protein {Xanthomonas campestris [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: XC6422 protein species: Xanthomonas campestris [TaxId: 339]
Probab=99.76 E-value=8.9e-18 Score=165.17 Aligned_cols=191 Identities=17% Similarity=0.117 Sum_probs=135.7
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEec--CCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGY--GGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~h--Gg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
++.+++.+.+| ++.+.+..|+.. ...+.+++|+.| +++|.++...+...+...|+++||.|+.+|+||.|+....
T Consensus 8 ~~~l~i~gp~G-~l~~~~~~p~~~-~~~~~~~~vl~Hph~~~GG~~~~~~~~~la~~l~~~G~~vlrfd~RG~G~S~g~- 84 (218)
T d2fuka1 8 SAALTLDGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS- 84 (218)
T ss_dssp CEEEEEEETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC-
T ss_pred ceEEEEeCCCc-cEEEEEEcCCCC-CCCCCcEEEEECCCCCCCcCCCChHHHHHHHHHHHcCCeEEEeecCCCccCCCc-
Confidence 46678888898 688988888653 233456666666 4455555443334455667788999999999995544322
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccccccc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYY 683 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~ 683 (783)
........+|+.++++|+.++. +.++++++|+|+||.+++.++.+.+ ..++|+.+|..++..+
T Consensus 85 -----~~~~~~~~~D~~a~~~~~~~~~--~~~~v~l~G~S~Gg~va~~~a~~~~--~~~lil~ap~~~~~~~-------- 147 (218)
T d2fuka1 85 -----FDHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAALE--PQVLISIAPPAGRWDF-------- 147 (218)
T ss_dssp -----CCTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHHC--CSEEEEESCCBTTBCC--------
T ss_pred -----cCcCcchHHHHHHHHHHHhhcc--cCceEEEEEEcccchhhhhhhcccc--cceEEEeCCcccchhh--------
Confidence 2233456889999999998873 4579999999999999988876632 3678888876542110
Q ss_pred chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEe
Q psy2521 684 SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVE 763 (783)
Q Consensus 684 ~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~ 763 (783)
++ .+ ..+| +|++||++|+.||+.++.++++++. .+.++.++
T Consensus 148 --------------------~~-~~-------~~~P-~Lvi~G~~D~~vp~~~~~~l~~~~~----------~~~~l~~i 188 (218)
T d2fuka1 148 --------------------SD-VQ-------PPAQ-WLVIQGDADEIVDPQAVYDWLETLE----------QQPTLVRM 188 (218)
T ss_dssp --------------------TT-CC-------CCSS-EEEEEETTCSSSCHHHHHHHHTTCS----------SCCEEEEE
T ss_pred --------------------hc-cc-------cccc-eeeEecCCCcCcCHHHHHHHHHHcc----------CCceEEEe
Confidence 00 01 2445 9999999999999999888766543 34678999
Q ss_pred CCCCccCCccch
Q psy2521 764 QDAGHGQGKALD 775 (783)
Q Consensus 764 ~~~gHg~~~~~~ 775 (783)
++++|.|.....
T Consensus 189 ~ga~H~f~~~~~ 200 (218)
T d2fuka1 189 PDTSHFFHRKLI 200 (218)
T ss_dssp TTCCTTCTTCHH
T ss_pred CCCCCCCCCCHH
Confidence 999999976444
|
| >d1jfra_ c.69.1.16 (A:) Lipase {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Lipase domain: Lipase species: Streptomyces exfoliatus [TaxId: 1905]
Probab=99.75 E-value=5.1e-18 Score=173.07 Aligned_cols=192 Identities=15% Similarity=0.024 Sum_probs=138.8
Q ss_pred CeEEEEEEECCCCc-EEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 524 FQTKQVYFRSKDGT-RVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 524 ~~~~~~~~~s~dg~-~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
+.+..+++....+. ...+.|++|++. .+++.|+||++||+.+.... +. .+...|+++||+|+.+|+||.++....
T Consensus 21 ~~~~~~~~~~~~~~g~~~~~ly~P~~~-~~g~~P~Vv~~HG~~g~~~~--~~-~~a~~lA~~Gy~V~~~d~~~~~~~~~~ 96 (260)
T d1jfra_ 21 YATSQTSVSSLVASGFGGGTIYYPTST-ADGTFGAVVISPGFTAYQSS--IA-WLGPRLASQGFVVFTIDTNTTLDQPDS 96 (260)
T ss_dssp SCEEEEEECTTTCSSSCCEEEEEESCC-TTCCEEEEEEECCTTCCGGG--TT-THHHHHHTTTCEEEEECCSSTTCCHHH
T ss_pred cceeEEEeccCCcCcccCEEEEEcCCC-CCCCccEEEEECCCCCCHHH--HH-HHHHHHHhCCCEEEEEeeCCCcCCchh
Confidence 44555555433221 234678899863 46789999999998766543 22 345678889999999999986544321
Q ss_pred HHhhccccCCcChHHHHHHHHHHHHHc----CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQAAAEYMINK----KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKF 678 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a~~~~l~~~----~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~ 678 (783)
...|+.+++++|++. +.+|++||+++|+|+||.+++.++...|+ ++|+|+.+|....
T Consensus 97 ------------~~~d~~~~~~~l~~~~~~~~~vD~~rI~v~G~S~GG~~al~aa~~~~~-~~A~v~~~~~~~~------ 157 (260)
T d1jfra_ 97 ------------RGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNTD------ 157 (260)
T ss_dssp ------------HHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCSC------
T ss_pred ------------hHHHHHHHHHHHHhhhhhhccccccceEEEeccccchHHHHHHhhhcc-chhheeeeccccc------
Confidence 146888899999874 56899999999999999999999998774 5788877764311
Q ss_pred cccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcE
Q psy2521 679 TIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPL 758 (783)
Q Consensus 679 ~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 758 (783)
..... +++| +|++||+.|..||+.+..+.+.++... +.+.
T Consensus 158 ----------------------------~~~~~----~~~P-~l~i~G~~D~~vp~~~~~~~~~~~~~~-------~~~~ 197 (260)
T d1jfra_ 158 ----------------------------KTWPE----LRTP-TLVVGADGDTVAPVATHSKPFYESLPG-------SLDK 197 (260)
T ss_dssp ----------------------------CCCTT----CCSC-EEEEEETTCSSSCTTTTHHHHHHHSCT-------TSCE
T ss_pred ----------------------------ccccc----cccc-eeEEecCCCCCCCHHHHHHHHHHhccc-------CCCE
Confidence 11122 4555 999999999999998765555554444 6788
Q ss_pred EEEEeCCCCccCCccchhhh
Q psy2521 759 LLRVEQDAGHGQGKALDIEL 778 (783)
Q Consensus 759 ~l~~~~~~gHg~~~~~~~~~ 778 (783)
.+.++++++|++..+.+..+
T Consensus 198 ~~~~i~ga~H~~~~~~~~~~ 217 (260)
T d1jfra_ 198 AYLELRGASHFTPNTSDTTI 217 (260)
T ss_dssp EEEEETTCCTTGGGSCCHHH
T ss_pred EEEEECCCccCCCCCChHHH
Confidence 99999999999876655443
|
| >d1u4na_ c.69.1.2 (A:) Carboxylesterase {Alicyclobacillus acidocaldarius [TaxId: 405212]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Carboxylesterase species: Alicyclobacillus acidocaldarius [TaxId: 405212]
Probab=99.75 E-value=4.3e-18 Score=178.34 Aligned_cols=216 Identities=15% Similarity=0.110 Sum_probs=142.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 525 QTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 525 ~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
.++.++++. +|.+|.+.++.|++. +++.|+|||+|||...... ..+......+..+.|+.|+.+|||...+..
T Consensus 45 ~~~~~~~~~-~g~~i~~~~y~P~~~--~~~~Pvvv~iHGGg~~~g~~~~~~~~~~~~a~~~~~~v~~v~Yrl~p~~~--- 118 (308)
T d1u4na_ 45 EVREFDMDL-PGRTLKVRMYRPEGV--EPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK--- 118 (308)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC---
T ss_pred cEEEEEEec-CCceEEEEEEecccc--CCCCCEEEEEecCeeeeeccccccchhhhhhhcccccccccccccccccc---
Confidence 567777775 899999999999874 4689999999998433322 233333344555545678889999865533
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhcCCC----ceeEEEEcCCcchhhhcc
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKK---YTKPKYITIMGGSNGGLLVGACLNQRPE----LYGAALILVGALDMLRFN 676 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~----lf~a~i~~~~~~d~~~~~ 676 (783)
.....+|+.++++||.++. .+|++||+|+|+|+||++++.++....+ ...+.....+..+.....
T Consensus 119 --------~p~~~~D~~~~~~~l~~~~~~~~~d~~ri~~~G~SaGG~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (308)
T d1u4na_ 119 --------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH 190 (308)
T ss_dssp --------TTHHHHHHHHHHHHHHTTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHHTCCCCCCEEEESCCCCCCTTS
T ss_pred --------cccccchhhhhhhHHHHhHHhcCCCcceEEEeeccccchhHHHHHHhhhhccCCCccccccccccccccccc
Confidence 1234689999999998753 5899999999999999999888765433 234455555554432211
Q ss_pred cccccccchhhhCCC--CCHH-HHHHH------------HhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHH
Q psy2521 677 KFTIAYYSESEFGSP--NNKT-HFHNL------------LSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFI 741 (783)
Q Consensus 677 ~~~~~~~~~~~~g~p--~~~~-~~~~~------------~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~ 741 (783)
.. ....+.... .... ..... ...|+...... ...||+||+||+.|..+ .++..|+
T Consensus 191 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~d~----~~~Pp~li~~g~~D~l~--~~~~~~~ 260 (308)
T d1u4na_ 191 PP----ASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDL----SGLPPAYIATAQYDPLR--DVGKLYA 260 (308)
T ss_dssp CC----HHHHHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCC----TTCCCEEEEEEEECTTH--HHHHHHH
T ss_pred cc----chhhhccccccccchhhhhhhhcccCccccccchhhhhhhchhh----cCCCCeeEEecCcCCch--HHHHHHH
Confidence 10 000011110 0000 00000 11233322222 46788999999999654 6899999
Q ss_pred HHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 742 ATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 742 ~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++|+++ |+++++.+|++++|+|.
T Consensus 261 ~~L~~~-------G~~v~~~~~~g~~Hgf~ 283 (308)
T d1u4na_ 261 EALNKA-------GVKVEIENFEDLIHGFA 283 (308)
T ss_dssp HHHHHT-------TCCEEEEEEEEEETTGG
T ss_pred HHHHHC-------CCCEEEEEECCCCEeCc
Confidence 999999 99999999999999974
|
| >d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein TT1662 domain: Hypothetical protein TT1662 species: Thermus thermophilus [TaxId: 274]
Probab=99.74 E-value=4.7e-18 Score=170.48 Aligned_cols=214 Identities=15% Similarity=0.064 Sum_probs=136.1
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
+.+|++++ .| +++....|. ++.|+||++||..+.... |. .+...|+++||+|+++|+||.|+....+
T Consensus 3 ~~~~~~~l---~g--~~~~~~~p~-----~~~~~vl~lHG~~~~~~~--~~-~~~~~la~~G~~V~~~D~~g~g~s~~~~ 69 (238)
T d1ufoa_ 3 VRTERLTL---AG--LSVLARIPE-----APKALLLALHGLQGSKEH--IL-ALLPGYAERGFLLLAFDAPRHGEREGPP 69 (238)
T ss_dssp EEEEEEEE---TT--EEEEEEEES-----SCCEEEEEECCTTCCHHH--HH-HTSTTTGGGTEEEEECCCTTSTTSSCCC
T ss_pred EEEEEEEE---CC--EEEEecCCC-----CCCeEEEEeCCCCCCHHH--HH-HHHHHHHHCCCEEEEecCCCCCCCcccc
Confidence 34566655 34 555555554 457999999998766532 22 2234456679999999999976543221
Q ss_pred HhhccccCCcCh---H-HHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc
Q psy2521 604 HNAGRLLKKQNC---F-DDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT 679 (783)
Q Consensus 604 ~~~g~~~~~~~~---~-~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~ 679 (783)
............ . .++.++..++...+.+++++++++|+|+||++++.++.++|+++.+ ++..+..+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~G~S~Gg~~a~~~~~~~p~~~~~-~~~~~~~~~~~~---- 144 (238)
T d1ufoa_ 70 PSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGV-LAFIGSGFPMKL---- 144 (238)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEETHHHHHHHHHHHTTCCCSCE-EEESCCSSCCCC----
T ss_pred cccccchhhhhhhhhHHhHHHHHHHHhhhccccCCceEEEEEecccHHHHHHHHhcCcchhhe-eeeeeecccccc----
Confidence 111000000111 1 2222233333334557788999999999999999999999976554 444443332211
Q ss_pred ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCC--c
Q psy2521 680 IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKN--P 757 (783)
Q Consensus 680 ~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~--~ 757 (783)
.+...+..+. ...+...++..+... ..+.| +||+||++|..|+++++.+++++|++. +. .
T Consensus 145 ------~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~P-~li~~G~~D~~v~~~~~~~~~~~l~~~-------~~~~~ 206 (238)
T d1ufoa_ 145 ------PQGQVVEDPG-VLALYQAPPATRGEA---YGGVP-LLHLHGSRDHIVPLARMEKTLEALRPH-------YPEGR 206 (238)
T ss_dssp ------CTTCCCCCHH-HHHHHHSCGGGCGGG---GTTCC-EEEEEETTCTTTTHHHHHHHHHHHGGG-------CTTCC
T ss_pred ------cccccccccc-ccchhhhhhhhhhhh---hcCCC-eEEEEcCCCCccCHHHHHHHHHHHHhc-------CCCce
Confidence 1222223333 334456677666544 14556 999999999999999999999999988 54 4
Q ss_pred EEEEEeCCCCccCCcc
Q psy2521 758 LLLRVEQDAGHGQGKA 773 (783)
Q Consensus 758 ~~l~~~~~~gHg~~~~ 773 (783)
+.+.+++|+||.+...
T Consensus 207 ~~~~~~~g~gH~~~~~ 222 (238)
T d1ufoa_ 207 LARFVEEGAGHTLTPL 222 (238)
T ss_dssp EEEEEETTCCSSCCHH
T ss_pred EEEEEECCCCCccCHH
Confidence 7889999999998643
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=3.8e-15 Score=151.58 Aligned_cols=261 Identities=14% Similarity=0.105 Sum_probs=177.2
Q ss_pred eEEEEEEc-CCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc
Q psy2521 169 NYFYFHNK-GLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD 247 (783)
Q Consensus 169 ~~yy~~~~-~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~ 247 (783)
+..|+.+. +++....||+.+..+...++|++... .+..++|||||++|||.....+. ..+++++..++..
T Consensus 5 ~iay~~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~-------~~~sP~wSPDGk~IAf~~~~~~~--~~~~~~~~~~~~~ 75 (269)
T d2hqsa1 5 RIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-------PLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAV 75 (269)
T ss_dssp EEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESS-------CEEEEEECTTSSEEEEEECTTSS--CEEEEEETTTCCE
T ss_pred eEEEEEEeCCCCceEEEEEEcCCCCCcEEEecCCC-------ceeeeEECCCCCEEEEEEeeccC--cceeeeecccCce
Confidence 45565554 44545679999876667777775332 15679999999999999877655 6799999999887
Q ss_pred ccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecC
Q psy2521 248 YPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDC 327 (783)
Q Consensus 248 ~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpD 327 (783)
...+........+.|||||+.|++..... ....+........ ....+ .........+.++++
T Consensus 76 ~~~~~~~~~~~~~~~spdg~~i~~~~~~~-------------~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~ 137 (269)
T d2hqsa1 76 RQVASFPRHNGAPAFSPDGSKLAFALSKT-------------GSLNLYVMDLASG--QIRQV---TDGRSNNTEPTWFPD 137 (269)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTT-------------SSCEEEEEETTTC--CEEEC---CCCSSCEEEEEECTT
T ss_pred eEEeeeecccccceecCCCCeeeEeeecC-------------Cccceeecccccc--cceee---eeccccccccccccc
Confidence 66554444446789999999999988422 1123333332221 11111 111223356789999
Q ss_pred CcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc-eeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 328 GRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 328 Gk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
++.+++..... ....|++.+++++. ...+...... ....|+|+|+.+++.++++ ....++..+..++.
T Consensus 138 ~~~~~~~~~~~-g~~~i~~~~~~~~~---------~~~~~~~~~~~~~~~~spdg~~~~~~~~~~-~~~~i~~~~~~~~~ 206 (269)
T d2hqsa1 138 SQNLAFTSDQA-GRPQVYKVNINGGA---------PQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG 206 (269)
T ss_dssp SSEEEEEECTT-SSCEEEEEETTSSC---------CEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCC
T ss_pred cccceeccccc-CCceEeeeeccccc---------ceeeecccccccccccccccceeEEEeecC-CceeeeEeeccccc
Confidence 99998887653 45789999998742 1222222222 2236999999999988765 44578888877654
Q ss_pred CCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccc
Q psy2521 407 EKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRR 473 (783)
Q Consensus 407 ~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~ 473 (783)
..++... .......++++|++|+|....++..+|+++++ +|+..+.|+...|.+..+.++|
T Consensus 207 ----~~~~~~~-~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~-dg~~~~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 207 ----VQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAWSP 267 (269)
T ss_dssp ----EEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEET-TSCCEEECCCSSSEEEEEEECC
T ss_pred ----ceEeecC-ccccceEECCCCCEEEEEEcCCCCcEEEEEEC-CCCCEEEEeCCCCcEEeEEeCC
Confidence 3444443 33445667888899999999999999999999 5666677877778887777776
|
| >d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85a species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.73 E-value=1.8e-17 Score=171.80 Aligned_cols=230 Identities=12% Similarity=0.061 Sum_probs=159.5
Q ss_pred CeEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH--HHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 524 FQTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 524 ~~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
+.++.+++.| ..|..|++.++.| .++.|+|+++||+.+......|.. ....++++.|+++++++..+.+.++
T Consensus 7 ~~v~~~~~~s~~~~r~~~~~v~~p-----~~~~Pvl~llhG~~~~~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 81 (288)
T d1sfra_ 7 LPVEYLQVPSPSMGRDIKVQFQSG-----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (288)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECC-----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred CEEEEEEEECCCCCcEEEEEEeCC-----CCCceEEEEcCCCCCCCcchhhhhhccHHHHHHhCCCEEEEeccCCCCCCc
Confidence 3456677765 4788899888765 368999999999765443333322 2467888889999999998876555
Q ss_pred hhHHhhc-cccCCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc
Q psy2521 601 EDWHNAG-RLLKKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK 677 (783)
Q Consensus 601 ~~~~~~g-~~~~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~ 677 (783)
..+.... ....+...+++++ +.+.+|.++..+|++|++|+|+|+||++++.++.++||+|+++++.+|.+++.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~S~GG~~A~~~a~~~pd~f~av~~~Sg~~~~~~~~~ 161 (288)
T d1sfra_ 82 DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMG 161 (288)
T ss_dssp BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTH
T ss_pred cccCcccccccccchhHHHHHHHHhHHHHHHhcCCCCCceEEEEEccHHHHHHHHHHhccccccEEEEecCccccccccc
Confidence 4333221 1122223344443 467888888789999999999999999999999999999999999999988654321
Q ss_pred cccccc---------chhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc--------------
Q psy2521 678 FTIAYY---------SESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP-------------- 734 (783)
Q Consensus 678 ~~~~~~---------~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~-------------- 734 (783)
...... ....+|.+... .+..++|+.++... ..+.+++++.+|..|..++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~~--~~~~~~~~~~~G~~d~~~~~~~~~~~~~~e~~~~ 235 (288)
T d1sfra_ 162 PTLIGLAMGDAGGYKASDMWGPKEDP----AWQRNDPLLNVGKL--IANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVR 235 (288)
T ss_dssp HHHHHHHHHHTTSCCHHHHHCSTTST----HHHHSCTTTTHHHH--HHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHH
T ss_pred chhhhhhhhhcccccHhhhcCCcchh----hhHhcCHHHHHHHh--hhcCCeEEEEeCCCCCCCccccccccchhHHHHH
Confidence 111000 01123433332 34578888876431 01233499999999988874
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCC-CccCC
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDA-GHGQG 771 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~-gHg~~ 771 (783)
.+++++.++|++. |.++.+..++++ +|.+.
T Consensus 236 ~~~~~l~~~l~~~-------g~~~~~~~~~~~G~H~w~ 266 (288)
T d1sfra_ 236 TSNIKFQDAYNAG-------GGHNGVFDFPDSGTHSWE 266 (288)
T ss_dssp HHHHHHHHHHHHT-------TCCSEEEECCSCCCSSHH
T ss_pred HHHHHHHHHHHHC-------CCCeEEEEECCCCccChh
Confidence 5678899999998 888888888875 59763
|
| >d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: IroE-like domain: Enterobactin and salmochelin hydrolase IroE species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=7.3e-17 Score=164.83 Aligned_cols=210 Identities=11% Similarity=0.046 Sum_probs=146.4
Q ss_pred CeEEEEEEECCCC-cEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 524 FQTKQVYFRSKDG-TRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 524 ~~~~~~~~~s~dg-~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
+..+++.+.+.|| .++.++|+.|.+..+++++|+|+++||+........ ....++.+.+|++++++++|+...++..
T Consensus 11 ~~~~~~~~~s~dg~~~~~~~v~~P~~~~~~~~yPvi~~lhG~~~~~~~~~--~~~~~~~~~~~~~vV~v~~~~~~~~~~~ 88 (265)
T d2gzsa1 11 YHFSATSFDSVDGTRHYRVWTAVPNTTAPASGYPILYMLDGNAVMDRLDD--ELLKQLSEKTPPVIVAVGYQTNLPFDLN 88 (265)
T ss_dssp EEEEEEEEECTTSSCEEEEEEEEESSCCCTTCEEEEEESSHHHHHHHCCH--HHHHHHTTSCCCEEEEEEESSSSSCCHH
T ss_pred ceeEEEEEEcCCCCEEEEEEEEcCCCCCCCCCceEEEEecCcchhhhHHH--HHHHHHHhcCCCeEEEecCCCCCcCccc
Confidence 4688899999998 579999999999988899999999999743332111 1123445667999999999998877643
Q ss_pred HHhhcc--------c----------cCCcChHHHHHH--HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeE
Q psy2521 603 WHNAGR--------L----------LKKQNCFDDFQA--AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGA 662 (783)
Q Consensus 603 ~~~~g~--------~----------~~~~~~~~D~~a--~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a 662 (783)
....-. . ..+...+.++.. .+.++.++..+|+++++|+|+|+||++++.++.+ ++.|.+
T Consensus 89 ~r~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~G~S~GG~~a~~~~~~-~~~f~~ 167 (265)
T d2gzsa1 89 SRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRS 167 (265)
T ss_dssp HHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSE
T ss_pred ccccccccccCcccccccccchhccccchHHHHHHHHHHHHHHHHHhcCCCcCceEEEeccHHHHHHHHHHHc-CcccCE
Confidence 221100 0 001112333332 4556666667899999999999999999998876 667888
Q ss_pred EEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCC--------CCCCCc
Q psy2521 663 ALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDH--------DDRVPP 734 (783)
Q Consensus 663 ~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~--------D~~V~~ 734 (783)
+++.+|...+.. . ..+...+++..... ...| +++.+|.. |.+|++
T Consensus 168 ~~a~s~~~~~~~-------------------~---~~~~~~~~~~~~~~----~~~~-~~~~~g~~~~~~~~~~d~~~~~ 220 (265)
T d2gzsa1 168 YYSASPSLGRGY-------------------D---ALLSRVTAVEPLQF----CTKH-LAIMEGSATQGDNRETHAVGVL 220 (265)
T ss_dssp EEEESGGGSTTH-------------------H---HHHHHHHTSCTTTT----TTCE-EEEEECCC-----------CHH
T ss_pred EEEECCcccccc-------------------h---hhhhcccccccccc----CCCc-EEEEcCCcccccccccccchhH
Confidence 888887653211 1 11223334433332 2333 88888866 788899
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.++.+++++|+++ |.++++.+||+++|+.
T Consensus 221 ~~~~~l~~~L~~~-------g~~~~~~~~pG~~Hg~ 249 (265)
T d2gzsa1 221 SKIHTTLTILKDK-------GVNAVFWDFPNLGHGP 249 (265)
T ss_dssp HHHHHHHHHHHHT-------TCCEEEEECTTCCHHH
T ss_pred HHHHHHHHHHHHC-------CCCEEEEEcCCCCcch
Confidence 9999999999999 9999999999999984
|
| >d1ju3a2 c.69.1.21 (A:5-351) Bacterial cocaine esterase N-terminal domain {Rhodococcus sp. mb1 [TaxId: 51612]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Bacterial cocaine esterase N-terminal domain species: Rhodococcus sp. mb1 [TaxId: 51612]
Probab=99.70 E-value=5.4e-17 Score=172.90 Aligned_cols=138 Identities=14% Similarity=0.107 Sum_probs=110.4
Q ss_pred EEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCC--CCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhH
Q psy2521 526 TKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG--YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDW 603 (783)
Q Consensus 526 ~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg--~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 603 (783)
.+.+.++.+||++|.+.+++|++ .++.|+||+.||. ........+...... ++++||+|+++|.||.|+.+..|
T Consensus 5 ~~~v~ipmrDGv~L~~~vy~P~~---~~~~P~il~~~pyg~~~~~~~~~~~~~~~~-~a~~GY~vv~~d~RG~g~S~G~~ 80 (347)
T d1ju3a2 5 ASNVMVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLE-FVRDGYAVVIQDTRGLFASEGEF 80 (347)
T ss_dssp EEEEEEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCCHHHHTTSCCTHH-HHHTTCEEEEEECTTSTTCCSCC
T ss_pred EeCeEEECCCCCEEEEEEEEcCC---CCCEEEEEEEcCCCCccccCcCcccHHHHH-HHHCCCEEEEEeeCCccccCCcc
Confidence 45699999999999999999986 5789999999863 222222223322334 44579999999999988877554
Q ss_pred HhhccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh
Q psy2521 604 HNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674 (783)
Q Consensus 604 ~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~ 674 (783)
. ...+...|..++++|+.++.+.| .||+++|.|+||+++.++|.+.|..++|+++.++..|+.+
T Consensus 81 ~------~~~~~~~d~~d~i~w~~~q~~~~-grVg~~G~SygG~~~~~~A~~~~~~l~aiv~~~~~~d~~~ 144 (347)
T d1ju3a2 81 V------PHVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYR 144 (347)
T ss_dssp C------TTTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCC
T ss_pred c------cccchhhhHHHHHHHHHhhccCC-cceEeeeccccccchhhhhhcccccceeeeeccccchhhh
Confidence 2 33445679999999999999987 6999999999999999999999999999999999998753
|
| >d1vkha_ c.69.1.32 (A:) Putative serine hydrolase Ydr428c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Putative serine hydrolase Ydr428c domain: Putative serine hydrolase Ydr428c species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.70 E-value=2.5e-17 Score=167.88 Aligned_cols=195 Identities=12% Similarity=0.046 Sum_probs=126.7
Q ss_pred CCCccEEEEecCCCCCcc---CCcCcH---HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSV---LPTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEY 625 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~---~~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~ 625 (783)
.++.|+|||+|||..... ...|.. .+..++.++||.|+.+|||++++.. ....++|+.++++|
T Consensus 28 ~~~~~~vv~iHGGg~~~~~~~~~~~~~~~~~l~~~~~~~g~~v~~~dYrl~p~~~-----------~~~~~~d~~~~~~~ 96 (263)
T d1vkha_ 28 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEIT-----------NPRNLYDAVSNITR 96 (263)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTSC-----------TTHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCCccCCCCCcchHHHHHHHHHHHHHhCCeEEEEeccccCcchh-----------hhHHHHhhhhhhhc
Confidence 467799999999843221 122221 2334555679999999999876543 12347899999999
Q ss_pred HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-----------------ceeEEEEcCCcchhhhcccccccccch--h
Q psy2521 626 MINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-----------------LYGAALILVGALDMLRFNKFTIAYYSE--S 686 (783)
Q Consensus 626 l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-----------------lf~a~i~~~~~~d~~~~~~~~~~~~~~--~ 686 (783)
|.++ .++.+|+|+|+|+||.+++.++...++ ...+.+...++.++...........+. .
T Consensus 97 l~~~--~~~~~i~l~G~S~Gg~lal~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (263)
T d1vkha_ 97 LVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTRL 174 (263)
T ss_dssp HHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHHH
T ss_pred cccc--ccccceeeeccCcHHHHHHHHHHhccCccccccccccccccccccccccccccccccchhhhhhccccchhhhc
Confidence 9987 467899999999999999988876543 346666666766665432111000010 1
Q ss_pred hhCC-CCCH-HHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeC
Q psy2521 687 EFGS-PNNK-THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQ 764 (783)
Q Consensus 687 ~~g~-p~~~-~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~ 764 (783)
.++. +... ....... ......+.. ... |+|++||++|++||+.++.+|+++|++. |.++++.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~-P~lii~G~~D~~vp~~~s~~l~~~L~~~-------g~~~~~~~~~ 241 (263)
T d1vkha_ 175 AFPDGIQMYEEEPSRVM-PYVKKALSR----FSI-DMHLVHSYSDELLTLRQTNCLISCLQDY-------QLSFKLYLDD 241 (263)
T ss_dssp HCTTCGGGCCCCHHHHH-HHHHHHHHH----HTC-EEEEEEETTCSSCCTHHHHHHHHHHHHT-------TCCEEEEEEC
T ss_pred ccccccccccccccccC-ccccccccc----cCC-CeeeeecCCCcccCHHHHHHHHHHHHHC-------CCCEEEEEEC
Confidence 1111 1000 0000000 000111111 233 4999999999999999999999999999 9999999999
Q ss_pred CCCccCCc
Q psy2521 765 DAGHGQGK 772 (783)
Q Consensus 765 ~~gHg~~~ 772 (783)
+++|...-
T Consensus 242 ~~~H~~~~ 249 (263)
T d1vkha_ 242 LGLHNDVY 249 (263)
T ss_dssp CCSGGGGG
T ss_pred CCCchhhh
Confidence 99997643
|
| >d2h1ia1 c.69.1.14 (A:1-202) Carboxylesterase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Bacillus cereus [TaxId: 1396]
Probab=99.68 E-value=1.4e-16 Score=155.49 Aligned_cols=186 Identities=10% Similarity=0.054 Sum_probs=128.1
Q ss_pred EEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh-cccc----CCcChHH
Q psy2521 543 IIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA-GRLL----KKQNCFD 617 (783)
Q Consensus 543 ~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~-g~~~----~~~~~~~ 617 (783)
++.|.. +++.|+||++||..+... .|. .+...+.+ ++.|+.++.......+..|... .... ......+
T Consensus 5 i~~~~~---~~~~P~vi~lHG~g~~~~--~~~-~~~~~l~~-~~~vv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (202)
T d2h1ia1 5 VFQKGK---DTSKPVLLLLHGTGGNEL--DLL-PLAEIVDS-EASVLSVRGNVLENGMPRFFRRLAEGIFDEEDLIFRTK 77 (202)
T ss_dssp EEECCS---CTTSCEEEEECCTTCCTT--TTH-HHHHHHHT-TSCEEEECCSEEETTEEESSCEEETTEECHHHHHHHHH
T ss_pred cCCCCC---CCCCCEEEEECCCCCCHH--HHH-HHHHHhcc-CCceeeecccccCCCCccccccCCCCCCchHHHHHHHH
Confidence 455543 467899999999654332 233 34456665 8888887654322222222111 0000 0112345
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHH
Q psy2521 618 DFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHF 697 (783)
Q Consensus 618 D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~ 697 (783)
++...++++.++..+|++||+++|+|+||.+++.++.++|+.++++++..|.+...
T Consensus 78 ~~~~~i~~~~~~~~~d~~~i~~~G~S~Gg~~a~~la~~~~~~~~~~~~~~~~~~~~------------------------ 133 (202)
T d2h1ia1 78 ELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRR------------------------ 133 (202)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCS------------------------
T ss_pred HHHHHHHHHHHhccccccceeeecccccchHHHHHHHhccccccceeeecCCCCcc------------------------
Confidence 67777778888888999999999999999999999999999999999988764210
Q ss_pred HHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhh
Q psy2521 698 HNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIE 777 (783)
Q Consensus 698 ~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~ 777 (783)
+...... ... +++++||++|++||+.++.+++++|++. |.++++..|++ ||++....-..
T Consensus 134 -------~~~~~~~----~~~-~~~i~~G~~D~~vp~~~~~~~~~~l~~~-------g~~~~~~~~~g-gH~~~~~~~~~ 193 (202)
T d2h1ia1 134 -------GMQLANL----AGK-SVFIAAGTNDPICSSAESEELKVLLENA-------NANVTMHWENR-GHQLTMGEVEK 193 (202)
T ss_dssp -------SCCCCCC----TTC-EEEEEEESSCSSSCHHHHHHHHHHHHTT-------TCEEEEEEESS-TTSCCHHHHHH
T ss_pred -------ccccccc----ccc-hhhcccccCCCccCHHHHHHHHHHHHHC-------CCCEEEEEECC-CCcCCHHHHHH
Confidence 0001111 233 3999999999999999999999999998 88999999986 89987544444
Q ss_pred hh
Q psy2521 778 LK 779 (783)
Q Consensus 778 ~~ 779 (783)
+.
T Consensus 194 ~~ 195 (202)
T d2h1ia1 194 AK 195 (202)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase PepX, middle domain {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: X-Prolyl dipeptidyl aminopeptidase PepX, middle domain species: Lactococcus lactis [TaxId: 1358]
Probab=99.68 E-value=8.9e-16 Score=166.62 Aligned_cols=230 Identities=13% Similarity=0.086 Sum_probs=161.7
Q ss_pred CCCCCCCCeEEEEEEECC-----CCc--EEEEEEEEecCcCCCCCccEEEEecCCCC-----------------------
Q psy2521 517 PEFEPTLFQTKQVYFRSK-----DGT--RVPMYIIHRVGALRNRRNPVIIYGYGGYG----------------------- 566 (783)
Q Consensus 517 ~~~~~~~~~~~~~~~~s~-----dg~--~v~~~~~~p~~~~~~~~~P~ll~~hGg~~----------------------- 566 (783)
|.|+.+....|.+++.+. ||+ ++.+.|++|++ .++.|+|+..+--+.
T Consensus 14 ~~~~~~~~~re~v~v~~~~dt~rDG~~d~l~~di~rP~~---~~k~Pvil~~sPY~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (405)
T d1lnsa3 14 ATFDSSLLEREVLWVESPVDSEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTS 90 (405)
T ss_dssp SCSCGGGCEEEEEEEECSCCTTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCS
T ss_pred ceecCCCceEeEEEEeCCCCCCCCCCEeEEEEEEEccCC---CCCceEEEEeCCcCCCCccccccccccccccccccccc
Confidence 457777788888998776 899 69999999987 468999995433110
Q ss_pred ---------------------------CccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHH
Q psy2521 567 ---------------------------VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDF 619 (783)
Q Consensus 567 ---------------------------~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~ 619 (783)
......+......+++++||+|+..|.||.|+.+..|... ...+.+|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GYavv~~D~RG~g~S~G~~~~~-----~~~e~~D~ 165 (405)
T d1lnsa3 91 HEIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQTSG-----DYQQIYSM 165 (405)
T ss_dssp EECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCCCTT-----SHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccchHHHHhCCCEEEEECCCCCCCCCCccccC-----ChhhhhhH
Confidence 0001112222345666789999999999988877666432 23457899
Q ss_pred HHHHHHHHHcCCC--------------CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccccc-----c
Q psy2521 620 QAAAEYMINKKYT--------------KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFT-----I 680 (783)
Q Consensus 620 ~a~~~~l~~~~~~--------------d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~-----~ 680 (783)
.++++||.++... ...||+++|.||||++..++|.+.|..++|+|+.+|+.|+.+..... .
T Consensus 166 ~~~IeWl~~~~~~~~~~~~~~~~~q~WsnGkVGm~G~SY~G~~q~~aA~~~pp~LkAivp~~~~~d~y~~~~~~G~~~~~ 245 (405)
T d1lnsa3 166 TAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSP 245 (405)
T ss_dssp HHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCC
T ss_pred HHHHHHHHhcccccccccccccccccccCCeeEEEecCHHHHHHHHHHhcCCccceEEEecCccccHHHHhhcCCccccc
Confidence 9999999764322 22589999999999999999999998899999999999986432100 0
Q ss_pred cccch------------------------------------hhhC-CCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEE
Q psy2521 681 AYYSE------------------------------------SEFG-SPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLV 723 (783)
Q Consensus 681 ~~~~~------------------------------------~~~g-~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li 723 (783)
...|. .+.. .+... +.+.+.||..++++ ++.| +|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---~~w~~~s~~~~~~~----I~vP-~L~ 317 (405)
T d1lnsa3 246 GGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYN---QFWHDRNYLINTDK----VKAD-VLI 317 (405)
T ss_dssp TTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCC---HHHHTTBGGGGGGG----CCSE-EEE
T ss_pred cchhhhhhhhhhccccccccccchhhhchhhhhhccchhhhhhhhccccch---hhhhhcChhhhhhc----CCCC-EEE
Confidence 00000 0000 11111 33567788877776 7887 999
Q ss_pred EecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 724 LTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 724 ~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
++|..|..|++.++.+++++|++ +.+..|.+-+ .+|+..
T Consensus 318 i~Gw~D~~v~~~~~~~~y~al~~--------~~~~~Lilgp-w~H~~~ 356 (405)
T d1lnsa3 318 VHGLQDWNVTPEQAYNFWKALPE--------GHAKHAFLHR-GAHIYM 356 (405)
T ss_dssp EEETTCCSSCTHHHHHHHHHSCT--------TCCEEEEEES-CSSCCC
T ss_pred EEeccCCCCCHHHHHHHHHHHHh--------CCCcEEEEeC-CCCCCC
Confidence 99999999999999999998863 4466777766 589753
|
| >d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal xylanase z {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase z species: Clostridium thermocellum [TaxId: 1515]
Probab=99.67 E-value=3.7e-16 Score=158.57 Aligned_cols=204 Identities=15% Similarity=0.050 Sum_probs=132.6
Q ss_pred CeEEEEEEEC-CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCc----CcHHHHHHHHcCC----EEEEEecCC
Q psy2521 524 FQTKQVYFRS-KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPT----FSISRCMFLRHFN----GIYAIPNIR 594 (783)
Q Consensus 524 ~~~~~~~~~s-~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~----~~~~~~~~l~~~G----~~v~~~~~R 594 (783)
..++++.+.| .+|+++++.|+.|+++.+++++|+|+++||+.+...... +...........+ +.+...+..
T Consensus 20 g~~~~~~~~S~~~g~~~~~~v~lP~~y~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (255)
T d1jjfa_ 20 GQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN 99 (255)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC
T ss_pred eEEEEEEEEecCCCCEEEEEEEeCCCCCCCCCCcEEEEEecCCCChHHhhhhhHHHHHHHHHHHhhccCCcceeeecccc
Confidence 4677887776 579999999999999988899999999999876543321 1111112222122 333333333
Q ss_pred CCCCCChhHHhhccccCCcChHHHHHHHHHHHHH--cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchh
Q psy2521 595 GGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN--KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDM 672 (783)
Q Consensus 595 G~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~--~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~ 672 (783)
........+.. ... -..+.+.+.++.+ ...+|++++++.|+|+||+++..++.++|++|+++++.+|..+.
T Consensus 100 ~~~~~~~~~~~----~~~---~~~~~~li~~i~~~~~~~~d~~~i~i~G~S~GG~~a~~~a~~~Pd~F~~v~~~sg~~~~ 172 (255)
T d1jjfa_ 100 AAGPGIADGYE----NFT---KDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNT 172 (255)
T ss_dssp CCCTTCSCHHH----HHH---HHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTS
T ss_pred ccccccccccc----chH---HHHHHHHHHHHHHhhccccccceeEeeeccchhHHHHHHHHhCCCcccEEEEEccCcCC
Confidence 22111111111 000 1122233444444 34589999999999999999999999999999999999887654
Q ss_pred hhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCC
Q psy2521 673 LRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLP 752 (783)
Q Consensus 673 ~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 752 (783)
..... .+ +..... .. ...|+++|.||+.|..++ ...+++++|+++
T Consensus 173 ~~~~~---------~~--~~~~~~------------~~-----~~~~~~~i~~G~~D~~~~--~~~~~~~~L~~~----- 217 (255)
T d1jjfa_ 173 YPNER---------LF--PDGGKA------------AR-----EKLKLLFIACGTNDSLIG--FGQRVHEYCVAN----- 217 (255)
T ss_dssp CCHHH---------HC--TTTTHH------------HH-----HHCSEEEEEEETTCTTHH--HHHHHHHHHHHT-----
T ss_pred ccccc---------cc--ccHHHH------------hh-----ccCCcceEEeCCCCCCch--HHHHHHHHHHHC-----
Confidence 22110 00 111000 00 123359999999999876 467899999998
Q ss_pred CCCCcEEEEEeCCCCccCC
Q psy2521 753 YQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 753 ~~~~~~~l~~~~~~gHg~~ 771 (783)
|.++++.+++++||.+.
T Consensus 218 --g~~~~~~~~~~ggH~~~ 234 (255)
T d1jjfa_ 218 --NINHVYWLIQGGGHDFN 234 (255)
T ss_dssp --TCCCEEEEETTCCSSHH
T ss_pred --CCCEEEEEECCCCcCHH
Confidence 99999999999999864
|
| >d2b9va2 c.69.1.21 (A:50-434) Alpha-amino acid ester hydrolase {Acetobacter pasteurianus [TaxId: 438]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PepX catalytic domain-like domain: Alpha-amino acid ester hydrolase species: Acetobacter pasteurianus [TaxId: 438]
Probab=99.67 E-value=3.3e-16 Score=169.09 Aligned_cols=152 Identities=14% Similarity=0.073 Sum_probs=119.0
Q ss_pred CCCCeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCC----CCCccCCcCc-----HHHHHHHHcCCEEEEEe
Q psy2521 521 PTLFQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG----YGVSVLPTFS-----ISRCMFLRHFNGIYAIP 591 (783)
Q Consensus 521 ~~~~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg----~~~~~~~~~~-----~~~~~~l~~~G~~v~~~ 591 (783)
...+..+.|.++.+||++|.+.|+.|++ .++.|+||..|+- ........+. .....+++++||+|+.+
T Consensus 23 ~~~~~~~~v~ipmrDG~~L~~~v~~P~~---~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Gy~vv~~ 99 (385)
T d2b9va2 23 QRDYIKREVMVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 99 (385)
T ss_dssp CCSEEEEEEEEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred CCCCeEeEEEEECCCCCEEEEEEEEcCC---CCceeEEEEEccCCCCCccccCCcccccccccchHHHHHHhCCcEEEEE
Confidence 4557889999999999999999999986 5789999986531 1111111111 11234566689999999
Q ss_pred cCCCCCCCChhHHhhcc-----ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 592 NIRGGGELGEDWHNAGR-----LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 592 ~~RG~g~~G~~~~~~g~-----~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
|+||.|+.+..|...+. ........+|+.++++||.++...+.+||+++|+|+||++++.++.+.|..++|+++.
T Consensus 100 d~RG~g~S~G~~~~~~~~~~~~~~~~~~e~~D~~~~i~w~~~q~~~~~g~vg~~G~SygG~~~~~~a~~~~~~l~a~~~~ 179 (385)
T d2b9va2 100 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPHPALKVAAPE 179 (385)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred cCCcccCCCCceeeccccccccccchhhHHHHHHHHHHHHHhccCccccceeeccccHHHHHHHHHHhccCCcceEEEEe
Confidence 99998888877755432 2344567899999999999998778899999999999999999999999999999999
Q ss_pred CCcchhhhc
Q psy2521 667 VGALDMLRF 675 (783)
Q Consensus 667 ~~~~d~~~~ 675 (783)
.+..|+.+.
T Consensus 180 ~~~~d~~~~ 188 (385)
T d2b9va2 180 SPMVDGWMG 188 (385)
T ss_dssp EECCCTTTB
T ss_pred ccccccccc
Confidence 998887653
|
| >d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Mll8374 species: Mesorhizobium loti [TaxId: 381]
Probab=99.64 E-value=3.8e-16 Score=153.51 Aligned_cols=181 Identities=15% Similarity=0.099 Sum_probs=124.2
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc-cc-C---CcChHHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR-LL-K---KQNCFDDFQAAAEYM 626 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~-~~-~---~~~~~~D~~a~~~~l 626 (783)
.++.|+||++||..+.... |. .....|.. ++.++.++.+.....+..|..... .. . ......++.+.++.+
T Consensus 20 ~~~~p~vv~lHG~g~~~~~--~~-~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 95 (209)
T d3b5ea1 20 KESRECLFLLHGSGVDETT--LV-PLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEA 95 (209)
T ss_dssp SSCCCEEEEECCTTBCTTT--TH-HHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCHHH--HH-HHHHHhcc-CcEEEeeccCcCcccCccccccCCccccchhhHHHHHHHHHHHHHHH
Confidence 3568999999997665432 33 34455654 788888776532222222321100 00 0 011245566677777
Q ss_pred HHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcc
Q psy2521 627 INKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPL 706 (783)
Q Consensus 627 ~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~ 706 (783)
.++..+|++||+|+|+|+||.+++.++.++|++|+++++.+|..... ..+.
T Consensus 96 ~~~~~id~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~~v~~~g~~~~~-----------------------------~~~~ 146 (209)
T d3b5ea1 96 AKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD-----------------------------HVPA 146 (209)
T ss_dssp HHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS-----------------------------SCCC
T ss_pred HHHhCcccCCEEEEeeCChHHHHHHHHHhCCCcceEEEEeCCccccc-----------------------------cccc
Confidence 77777899999999999999999999999999999999988743210 0011
Q ss_pred cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhcc
Q psy2521 707 HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKNP 781 (783)
Q Consensus 707 ~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~~ 781 (783)
.+. ...| ++++||..|+.|+ ..+.++++.|++. |.++++++|++ ||++....-+.+.++
T Consensus 147 ~~~------~~~p-~~~~~G~~D~~~~-~~~~~~~~~l~~~-------G~~v~~~~~~g-gH~i~~~~~~~~~~w 205 (209)
T d3b5ea1 147 TDL------AGIR-TLIIAGAADETYG-PFVPALVTLLSRH-------GAEVDARIIPS-GHDIGDPDAAIVRQW 205 (209)
T ss_dssp CCC------TTCE-EEEEEETTCTTTG-GGHHHHHHHHHHT-------TCEEEEEEESC-CSCCCHHHHHHHHHH
T ss_pred ccc------ccch-heeeeccCCCccC-HHHHHHHHHHHHC-------CCCeEEEEECC-CCCCCHHHHHHHHHH
Confidence 121 2334 9999999999987 5678899999998 89999999987 899976555555443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.64 E-value=5.1e-14 Score=155.79 Aligned_cols=299 Identities=12% Similarity=0.083 Sum_probs=176.8
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC----CCceEEEEEEECCCCccccccccccccCe
Q psy2521 184 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS----GSDWNTLHIKDVDTGKDYPEVLKNVKFPS 259 (783)
Q Consensus 184 l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~----G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~ 259 (783)
+++.+..++..++|++..++...+ -.+..++|||||++|||..+.. .+...+++++|+++|+..+++........
T Consensus 38 ~~~~~~~t~~~~~~~~~~~~~~~~-~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~ 116 (470)
T d2bgra1 38 ILVFNAEYGNSSVFLENSTFDEFG-HSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQW 116 (470)
T ss_dssp EEEEETTTCCEEEEECTTTTTTSS-SCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEE
T ss_pred EEEEECCCCCEEEEEchhhhhhcc-CccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccc
Confidence 666677678888999987775432 2467899999999999987532 12346899999999987766654444468
Q ss_pred eEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCcee-------EEecCCC-------CeeEEEEEEe
Q psy2521 260 ISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP-------VVEFPNG-------RSLGLHSEVT 325 (783)
Q Consensus 260 ~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~-------v~~~~~~-------~~~~~~~~~S 325 (783)
+.|||||+.|+|.+. ..+|++.+.++...... ++....+ ......+.||
T Consensus 117 ~~~SPDG~~ia~~~~-----------------~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wS 179 (470)
T d2bgra1 117 VTWSPVGHKLAYVWN-----------------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWS 179 (470)
T ss_dssp EEECSSTTCEEEEET-----------------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEEC
T ss_pred cccccCcceeeEeec-----------------ccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEEC
Confidence 999999999999872 24666655544321111 1111000 0011346789
Q ss_pred cCCcEEEEEEecCCC--------------------------------CcEEEEEECCCCCCCcccC--------------
Q psy2521 326 DCGRYLLVSTSNNTQ--------------------------------GSDLHYFDLHSLPDGKISG-------------- 359 (783)
Q Consensus 326 pDGk~l~~~~~~~~~--------------------------------~~~l~~~dl~~g~~~~l~~-------------- 359 (783)
|||++|++....... ...++++++.++.......
T Consensus 180 PDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
T d2bgra1 180 PNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGD 259 (470)
T ss_dssp TTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSC
T ss_pred CCCCccceeEecCCcCceEEEEeeccCCCCCCeeeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCC
Confidence 999999886532110 0235666654432111000
Q ss_pred ---------------------CCC--ceeeec--C------------------------ccceeEEEEeeCCEE-EEEEC
Q psy2521 360 ---------------------KFP--LKTVIP--G------------------------MDHHHEIIANNGPEL-IVKTT 389 (783)
Q Consensus 360 ---------------------~~~--~~~l~~--~------------------------~~~~~~~~s~dg~~l-~~~t~ 389 (783)
... ...+.. . .......++++++.. ++.+.
T Consensus 260 ~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~ 339 (470)
T d2bgra1 260 HYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN 339 (470)
T ss_dssp EEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC
T ss_pred ceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEec
Confidence 000 000000 0 000111344555544 44555
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC----eeEEEEEECCCCceeeeecCC---
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV----RSVMDLHDLNTGKRLHSFPLD--- 462 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g----~~~l~~~dl~~G~~~~~l~~~--- 462 (783)
+++ ..+||.++.++.. . ..++.++..+.. +...+++.++|.....+ ..+||.+++..+...+.|+..
T Consensus 340 ~dg-~~~ly~~~~~g~~---~-~~lt~g~~~v~~-~~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~ 413 (470)
T d2bgra1 340 EEG-YRHICYFQIDKKD---C-TFITKGTWEVIG-IEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNP 413 (470)
T ss_dssp TTS-CEEEEEEETTCSC---C-EESCCSSSCEEE-EEEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTST
T ss_pred cCc-CceeEEEeccCCc---e-eeeccCCeeEEE-EEEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccC
Confidence 544 4469999987765 2 344455455554 44455588888776443 347999999555555556532
Q ss_pred -CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEee
Q psy2521 463 -LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 513 (783)
Q Consensus 463 -~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~ 513 (783)
.+.+..++.+||++.++.+++++.+|.. ..++. .+|+ .+.+|..
T Consensus 414 ~~~~~~s~~fSpdgky~~~~~s~~~~P~~-~l~~~-----~~g~-~v~~le~ 458 (470)
T d2bgra1 414 ERCQYYSVSFSKEAKYYQLRCSGPGLPLY-TLHSS-----VNDK-GLRVLED 458 (470)
T ss_dssp TTBCBEEEEECTTSSEEEEEECSBSSCEE-EEEET-----TTTE-EEEEEEC
T ss_pred CCCCEEEEEECCCCCEEEEEecCCCCCeE-EEEEC-----CCCC-EEEEEec
Confidence 3445577788999999999999999974 55666 3552 4455543
|
| >d2i3da1 c.69.1.36 (A:2-219) Hypothetical protein Atu1826 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Atu1826-like domain: Hypothetical protein Atu1826 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.63 E-value=9.4e-15 Score=144.26 Aligned_cols=195 Identities=16% Similarity=0.155 Sum_probs=141.5
Q ss_pred EEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCC--CCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 528 QVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGG--YGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 528 ~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg--~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
++++.+.+| ++.+++..++ .+..|++|+.||. +|.++...........+.++||.++.+|+||-|...
T Consensus 2 ev~i~g~~G-~Le~~~~~~~----~~~~~~~l~~Hp~p~~GG~~~~~~~~~~a~~l~~~G~~~lrfn~RG~g~S~----- 71 (218)
T d2i3da1 2 EVIFNGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQ----- 71 (218)
T ss_dssp EEEEEETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCC-----
T ss_pred cEEEeCCCc-cEEEEEeCCC----CCCCCEEEEECCCcCcCCcCCcHHHHHHHHHHHhcCeeEEEEecCccCCCc-----
Confidence 477889999 7999865433 3456899999985 455555444444556677789999999999955433
Q ss_pred hccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccch
Q psy2521 606 AGRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSE 685 (783)
Q Consensus 606 ~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~ 685 (783)
|.........+|..++++|+..++..+ .++.+.|+|+||.+++.++.+.+.. .++++..|......+
T Consensus 72 -G~~~~~~~e~~d~~aa~~~~~~~~~~~-~~~~~~g~S~G~~~a~~~a~~~~~~-~~~~~~~~~~~~~~~---------- 138 (218)
T d2i3da1 72 -GEFDHGAGELSDAASALDWVQSLHPDS-KSCWVAGYSFGAWIGMQLLMRRPEI-EGFMSIAPQPNTYDF---------- 138 (218)
T ss_dssp -SCCCSSHHHHHHHHHHHHHHHHHCTTC-CCEEEEEETHHHHHHHHHHHHCTTE-EEEEEESCCTTTSCC----------
T ss_pred -cccccchhHHHHHHHHHhhhhcccccc-cceeEEeeehHHHHHHHHHHhhccc-cceeeccccccccch----------
Confidence 334455567899999999999876544 4789999999999999999887654 555555554322110
Q ss_pred hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 686 SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 686 ~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
..+.. ...| +|+++|..|..++..+..+++++++.. + +..+++.++++
T Consensus 139 ---------------------~~~~~----~~~p-~l~i~g~~D~~~~~~~~~~l~~~~~~~----~--~~~~~~~vi~g 186 (218)
T d2i3da1 139 ---------------------SFLAP----CPSS-GLIINGDADKVAPEKDVNGLVEKLKTQ----K--GILITHRTLPG 186 (218)
T ss_dssp ---------------------TTCTT----CCSC-EEEEEETTCSSSCHHHHHHHHHHHTTS----T--TCCEEEEEETT
T ss_pred ---------------------hhccc----cCCC-ceeeecccceecChHHHHHHHHHHhhc----c--CCCccEEEeCC
Confidence 11111 2344 999999999999999999999998864 1 55688999999
Q ss_pred CCccCCccchhh
Q psy2521 766 AGHGQGKALDIE 777 (783)
Q Consensus 766 ~gHg~~~~~~~~ 777 (783)
++|.|.......
T Consensus 187 AdHfF~g~~~~l 198 (218)
T d2i3da1 187 ANHFFNGKVDEL 198 (218)
T ss_dssp CCTTCTTCHHHH
T ss_pred CCCCCcCCHHHH
Confidence 999997544443
|
| >d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Enterochelin esterase, catalytic domain species: Shigella flexneri 2a str. 2457T [TaxId: 198215]
Probab=99.62 E-value=2.3e-16 Score=159.31 Aligned_cols=206 Identities=14% Similarity=0.104 Sum_probs=131.3
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEE----EEEecCCCCCCC
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGI----YAIPNIRGGGEL 599 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~----v~~~~~RG~g~~ 599 (783)
.++++++.|. .|.+++++++.|++.+ ++++|+||+.||+....... .......+++ .|.. ++.++.. .
T Consensus 14 ~~~~~~~~S~~lg~~~~~~v~~P~~~~-~~~~Pvvv~lhG~~~~~~~~-~~~~l~~l~~-~~~~~~~i~v~~~~~----~ 86 (246)
T d3c8da2 14 PAKEIIWKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSMP-VWPVLTSLTH-RQQLPPAVYVLIDAI----D 86 (246)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEC------CCCCEEEESSHHHHHHTSC-CHHHHHHHHH-TTSSCSCEEEEECCC----S
T ss_pred CcEEEEEECCCCCCEEEEEEEECCCCC-CCCCCEEEEeCCcchhccCc-HHHHHHHHHH-hCCCCceEEeecccc----c
Confidence 5677778774 5889999999999875 46799999999975433322 2223344454 4533 3333221 1
Q ss_pred ChhHHhhccccCCcChHHHHH-H-HHHHHHHc--CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhc
Q psy2521 600 GEDWHNAGRLLKKQNCFDDFQ-A-AAEYMINK--KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRF 675 (783)
Q Consensus 600 G~~~~~~g~~~~~~~~~~D~~-a-~~~~l~~~--~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~ 675 (783)
+ .+.... ......+.+++ . .+.++.+. ..+|+++++|+|+|+||++++.++.++|++|+++++.+|..++...
T Consensus 87 ~-~~~~~~--~~~~~~~~~~~~~el~~~v~~~~~~~~d~~~~~i~G~S~GG~~al~~~~~~P~~F~a~~~~sg~~~~~~~ 163 (246)
T d3c8da2 87 T-THRAHE--LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHR 163 (246)
T ss_dssp H-HHHHHH--SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCT
T ss_pred c-cccccc--cCccHHHHHHHHHHhhhHHHHhcccccCccceEEEecCchhHHHhhhhccCCchhcEEEcCCcccccccC
Confidence 1 111111 11112233332 2 22233222 3478999999999999999999999999999999999998865432
Q ss_pred ccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCC
Q psy2521 676 NKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQK 755 (783)
Q Consensus 676 ~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 755 (783)
. ...... ....++..+... ...| +++.+|..|+++ +.++.+|+++|++. |
T Consensus 164 ~-------------~~~~~~----~~~~~~~~~~~~----~~~~-~~l~~G~~D~~~-~~~~~~l~~~L~~~-------g 213 (246)
T d3c8da2 164 G-------------GQQEGV----LLEKLKAGEVSA----EGLR-IVLEAGIREPMI-MRANQALYAQLHPI-------K 213 (246)
T ss_dssp T-------------SSSCCH----HHHHHHTTSSCC----CSCE-EEEEEESSCHHH-HHHHHHHHHHTGGG-------T
T ss_pred C-------------ccchHH----HHHHhhhhhhhc----cCCC-eEEEecCCCcch-hHHHHHHHHHHHHC-------C
Confidence 1 111111 122234444443 2344 999999999877 57889999999999 9
Q ss_pred CcEEEEEeCCCCccCC
Q psy2521 756 NPLLLRVEQDAGHGQG 771 (783)
Q Consensus 756 ~~~~l~~~~~~gHg~~ 771 (783)
.++.+.++++ ||.+.
T Consensus 214 ~~~~~~~~~G-gH~~~ 228 (246)
T d3c8da2 214 ESIFWRQVDG-GHDAL 228 (246)
T ss_dssp TSEEEEEESC-CSCHH
T ss_pred CCEEEEEeCC-CCChH
Confidence 9999999997 89764
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=7.3e-14 Score=154.05 Aligned_cols=322 Identities=10% Similarity=0.043 Sum_probs=189.9
Q ss_pred cEEeCCeEEEEEEcCCC----CeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEE
Q psy2521 163 PQRQENNYFYFHNKGLQ----NHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~ 238 (783)
.++||.++++..+.... ....+|+.+...+..+.|..+..- ...+..+.|||||++|||+.+ ..||
T Consensus 68 ~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~----~~~l~~~~wSPDG~~iafv~~------~nl~ 137 (465)
T d1xfda1 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS----NAKLQYAGWGPKGQQLIFIFE------NNIY 137 (465)
T ss_dssp ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC----SCCCSBCCBCSSTTCEEEEET------TEEE
T ss_pred ECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCC----ccccceeeeccCCceEEEEec------ceEE
Confidence 45788887776543211 123566666555555554332211 122567899999999999874 3699
Q ss_pred EEECCCCcccccccccc-------------------ccCeeEEeeCCCEEEEEEeecCCCCC------CCC---cc----
Q psy2521 239 IKDVDTGKDYPEVLKNV-------------------KFPSISWTHDHKGFFYNQYCDINGTA------DGT---ET---- 286 (783)
Q Consensus 239 v~Dl~tg~~~~~~~~~~-------------------~~~~~~WspDg~~l~y~~~~~~~~~~------~g~---~~---- 286 (783)
+++..+++..+++..+. ...++.|||||++|+|.+.++..... .+. ..
T Consensus 138 ~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~ 217 (465)
T d1xfda1 138 YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYH 217 (465)
T ss_dssp EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEE
T ss_pred EEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeee
Confidence 99998887665543221 01467799999999999987653210 000 00
Q ss_pred -----cccCCceEEEEEcCCCCCCceeEEecCC----CCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 287 -----TAHMGQKIYYHVLGTEQDKDIPVVEFPN----GRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 287 -----~~~~~~~v~~~~lgt~~~~d~~v~~~~~----~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
..+...+|++.++.++... .+...+. ...+...+.|+||++.++...++......++++|..+|..
T Consensus 218 Yp~~G~~np~~~l~v~d~~~~~~~--~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~--- 292 (465)
T d1xfda1 218 YPKAGSENPSISLHVIGLNGPTHD--LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC--- 292 (465)
T ss_dssp CCBTTSCCCEEEEEEEESSSSCCC--EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE---
T ss_pred ccccCCCCCceeEEEEecCCCcEE--EEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcE---
Confidence 0011135777777654322 1111111 1224557899999998888888765558899999988532
Q ss_pred cCCCCceeeecCcc-------ceeEEEEeeCCEEEEEE--CCCCCCceEEEEcCCCCC---CCCcEEeecCCCCceEEEE
Q psy2521 358 SGKFPLKTVIPGMD-------HHHEIIANNGPELIVKT--TKNAPKGKVVTINLNNPC---EKNWKTLIPEDENRTLDVV 425 (783)
Q Consensus 358 ~~~~~~~~l~~~~~-------~~~~~~s~dg~~l~~~t--~~~~~~~~L~~~d~~~~~---~~~~~~li~~~~~~~l~~~ 425 (783)
+.+..... .....|++||+.++|+. .++ ....++.+.+.... .......++.++..+.+..
T Consensus 293 ------~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~-g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~ 365 (465)
T d1xfda1 293 ------TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG-GRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKIL 365 (465)
T ss_dssp ------EEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS-SSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEE
T ss_pred ------EEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeec-ccCceEEEEeccccccCCCceeEEeccCCceEEEEE
Confidence 22222111 12236999999887753 333 33457766543211 0011233455656666544
Q ss_pred EEe-eCCEEEEEEecCC--eeEEEEEECCCCceeeeecCC---CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCC
Q psy2521 426 AAV-ANNKLIVHYIQNV--RSVMDLHDLNTGKRLHSFPLD---LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPEN 499 (783)
Q Consensus 426 ~~~-~g~~l~~~~~~~g--~~~l~~~dl~~G~~~~~l~~~---~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~ 499 (783)
.+. +++.|+|....+. ..+||.+++..+...+.++.. .+....++.+++++.++..++++..|. +..++.
T Consensus 366 ~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~-~~~~~~--- 441 (465)
T d1xfda1 366 AYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPM-VTVHNT--- 441 (465)
T ss_dssp EEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCC-EEEEET---
T ss_pred EEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCe-EEEEEC---
Confidence 443 3468888887654 467999999544343445422 333446667899999999999998887 556665
Q ss_pred cCCCCCCceEEEee
Q psy2521 500 ITDQDDFKPTIFRE 513 (783)
Q Consensus 500 ~~~tg~~~~~~~~~ 513 (783)
.+++ ....|..
T Consensus 442 --~~~~-~~~~Le~ 452 (465)
T d1xfda1 442 --TDKK-KMFDLET 452 (465)
T ss_dssp --TTCC-EEEEEEC
T ss_pred --CCCC-EEEEEcC
Confidence 3553 4445543
|
| >d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Gastric lipase domain: Gastric lipase species: Dog (Canis familiaris) [TaxId: 9615]
Probab=99.61 E-value=1.2e-15 Score=162.79 Aligned_cols=142 Identities=15% Similarity=0.096 Sum_probs=97.1
Q ss_pred CCCeEEEEEEECCCCcEEEEEEEE--ecCcCCCCCccEEEEecCCCCCccCCcCc---HHHHHHHHcCCEEEEEecCCCC
Q psy2521 522 TLFQTKQVYFRSKDGTRVPMYIIH--RVGALRNRRNPVIIYGYGGYGVSVLPTFS---ISRCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 522 ~~~~~~~~~~~s~dg~~v~~~~~~--p~~~~~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG~ 596 (783)
..|..|+.++++.||..+..+.+. +.+....++.|+||++||.++.+..+... ......|+++||.|+++|.||.
T Consensus 23 ~~y~~e~h~v~t~DG~~l~~~ri~~~~~~~~~~~~~~~vlllHG~~~~~~~~~~~~~~~sla~~L~~~Gy~V~~~D~rG~ 102 (377)
T d1k8qa_ 23 WGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TTCCCEEEEEECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred cCCCceEEEEEcCCCCEEEEEEecCCCCCCccCCCCCeEEEECCCccchhHHhhcCccchHHHHHHHCCCEEEEEcCCCC
Confidence 467889999999999988887553 22334467789999999987776543221 2244566668999999999995
Q ss_pred CCCChhH-HhhccccC-----CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEE
Q psy2521 597 GELGEDW-HNAGRLLK-----KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALI 665 (783)
Q Consensus 597 g~~G~~~-~~~g~~~~-----~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~ 665 (783)
|.....- ........ ......|+.++++++.+. ...+++.++|||+||.+++.++.++|+....++.
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~i~~i~~~--~g~~~v~lvGhS~GG~ia~~~a~~~p~~~~~l~~ 175 (377)
T d1k8qa_ 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKT 175 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEE
T ss_pred CCCCCCCCCCCcchhhccCCHHHHhhhhHHHHHHHHHHH--cCCCCEEEEEecchHHHHHHHHHhhhhhhhhcee
Confidence 5432100 00000000 012356888999998775 2336899999999999999999999986554443
|
| >d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen pt51/mpb51 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.59 E-value=5e-15 Score=151.21 Aligned_cols=220 Identities=12% Similarity=0.091 Sum_probs=145.8
Q ss_pred EEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc--HHHHHHHHcCCEEEEEecCCCCCCCChh
Q psy2521 526 TKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS--ISRCMFLRHFNGIYAIPNIRGGGELGED 602 (783)
Q Consensus 526 ~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 602 (783)
+|+++++|. .|..||+.+..+ ..|+|++.||..+......|. ....+.+++.|++|+++|--. +.+..+
T Consensus 4 ~e~~~v~s~~~~r~~~~~v~~~-------~~pvlylLhG~~g~~~~~~w~~~~~~~~~~~~~~~iVV~p~g~~-~~~y~~ 75 (267)
T d1r88a_ 4 YENLMVPSPSMGRDIPVAFLAG-------GPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGA-YSMYTN 75 (267)
T ss_dssp CEEEEEEETTTTEEEEEEEECC-------SSSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCT-TSTTSB
T ss_pred eEEEEEecccCCceeeEEEECC-------CCCEEEEcCCCCCCCCcchhhhccHHHHHHhhCCeEEEEECCCC-CcCCcc
Confidence 567788775 677899887643 349999999954432222222 124566777899999998532 233444
Q ss_pred HHhhccccCCcChHHHHHH--HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccc
Q psy2521 603 WHNAGRLLKKQNCFDDFQA--AAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTI 680 (783)
Q Consensus 603 ~~~~g~~~~~~~~~~D~~a--~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~ 680 (783)
|... +...+++++. .+.+|.++..+|++|++|.|.||||++++.++.++||+|+++++.+|.+++........
T Consensus 76 ~~~~-----~~~~~~tfl~~eL~~~i~~~~~~d~~r~~i~G~SmGG~~Al~la~~~Pd~F~av~~~SG~~~~~~~~~~~~ 150 (267)
T d1r88a_ 76 WEQD-----GSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGA 150 (267)
T ss_dssp CSSC-----TTCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHH
T ss_pred cccc-----ccccHHHHHHHHHHHHHHHhcCCCCCceEEEEEcchHHHHHHHHHhCcccccEEEEeCCccCCCCccchhh
Confidence 4322 2233666665 57788777778999999999999999999999999999999999999887643211000
Q ss_pred ---------cccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCc-----------HHHHHH
Q psy2521 681 ---------AYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPP-----------LHSYKF 740 (783)
Q Consensus 681 ---------~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~-----------~~~~~~ 740 (783)
+......||.+.. ..+.+.+|+.+++..+ ...+.+++.+|..|..+.+ .++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~g~~~~----~~~~~~~p~~~~~~~~--~~~~~~~~~~G~~d~~~~~~~~~~~~~~~~~~~~~~ 224 (267)
T d1r88a_ 151 IAAGMQQFGGVDTNGMWGAPQL----GRWKWHDPWVHASLLA--QNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMF 224 (267)
T ss_dssp HHHHHHHHHCCCTHHHHCCGGG----STTGGGCTTTTHHHHH--HTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHH
T ss_pred hhhHHhhhcCCcHhhccCCcch----HhHHhcCHHHHHHhcc--ccCceEEEEecCCCcccccchhhhhHHHhhhhHHHH
Confidence 0011122343322 1234677877664310 1223499999999977754 345677
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 741 IATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 741 ~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
.++|++. ++.++.+.+.++.||.+
T Consensus 225 ~~~l~~~------~g~~~~~~~~~~G~H~W 248 (267)
T d1r88a_ 225 YNQYRSV------GGHNGHFDFPASGDNGW 248 (267)
T ss_dssp HHHHHHT------TCCSEEEECCSSCCSSH
T ss_pred HHHHHHc------CCCcEEEEEcCCCeECh
Confidence 8888876 26788888888899975
|
| >d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Acyl protein thioesterase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=2.9e-15 Score=149.29 Aligned_cols=190 Identities=15% Similarity=0.122 Sum_probs=120.2
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCC------CCCCChhHHhhcccc-CCcChHHHHHH---H
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRG------GGELGEDWHNAGRLL-KKQNCFDDFQA---A 622 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG------~g~~G~~~~~~g~~~-~~~~~~~D~~a---~ 622 (783)
+..++||++||..+... .|.. ....+...|+.+++++-.. ++..+..|....... .......++.. .
T Consensus 19 ~~~~~VI~lHG~G~~~~--~~~~-~~~~l~~~~~~~v~p~Ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~i~~~~~~ 95 (229)
T d1fj2a_ 19 KATAAVIFLHGLGDTGH--GWAE-AFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAEN 95 (229)
T ss_dssp CCSEEEEEECCSSSCHH--HHHH-HHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBCHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCHH--HHHH-HHHHhcCCCCEEEeCCCCCCccccCCCcccccccccccccccchhhhHHHHHHHHH
Confidence 45679999999544332 1222 2222334689999876421 222344554421111 11122222322 2
Q ss_pred HHHHHH---cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHH
Q psy2521 623 AEYMIN---KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHN 699 (783)
Q Consensus 623 ~~~l~~---~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 699 (783)
++.+++ +..++++||+|+|+|+||.+++.++.++|+.|+++|+.+|.+-.... + +
T Consensus 96 l~~li~~~~~~~i~~~ri~l~GfS~Gg~~a~~~~~~~~~~~~gvi~~sg~lp~~~~--------~------~-------- 153 (229)
T d1fj2a_ 96 IKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRAS--------F------P-------- 153 (229)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGG--------S------C--------
T ss_pred HHHHhhhhhhcCCCccceeeeecccchHHHHHHHHhhccccCcccccccccccccc--------c------c--------
Confidence 222222 23489999999999999999999999999999999998875421110 0 0
Q ss_pred HHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhh
Q psy2521 700 LLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELK 779 (783)
Q Consensus 700 ~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~ 779 (783)
.++..... .+.| +|++||+.|++||+.++.+.++.|++.. .+..+++++|++.||.+...+-..+.
T Consensus 154 ---~~~~~~~~-----~~~P-vli~hG~~D~~vp~~~~~~~~~~L~~~~-----~~~~v~~~~~~g~gH~i~~~~~~~~~ 219 (229)
T d1fj2a_ 154 ---QGPIGGAN-----RDIS-ILQCHGDCDPLVPLMFGSLTVEKLKTLV-----NPANVTFKTYEGMMHSSCQQEMMDVK 219 (229)
T ss_dssp ---SSCCCSTT-----TTCC-EEEEEETTCSSSCHHHHHHHHHHHHHHS-----CGGGEEEEEETTCCSSCCHHHHHHHH
T ss_pred ---cccccccc-----ccCc-eeEEEcCCCCeeCHHHHHHHHHHHHhcC-----CCCceEEEEeCCCCCccCHHHHHHHH
Confidence 01111111 2344 9999999999999999999999999851 15689999999999998766555444
Q ss_pred cc
Q psy2521 780 NP 781 (783)
Q Consensus 780 ~~ 781 (783)
++
T Consensus 220 ~w 221 (229)
T d1fj2a_ 220 QF 221 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.57 E-value=7.6e-13 Score=134.15 Aligned_cols=240 Identities=15% Similarity=0.136 Sum_probs=160.4
Q ss_pred cEEEEEEecCC-CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEc
Q psy2521 221 KHFAYCLSKSG-SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVL 299 (783)
Q Consensus 221 ~~la~~~~~~G-~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~l 299 (783)
++|||.+..+| ...++|||+|.+++.....+.......+++|||||++|+|++.. .....++....
T Consensus 4 ~~iay~~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~-------------~~~~~~~~~~~ 70 (269)
T d2hqsa1 4 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFE-------------SGRSALVIQTL 70 (269)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECT-------------TSSCEEEEEET
T ss_pred CeEEEEEEeCCCCceEEEEEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEee-------------ccCcceeeeec
Confidence 78999998865 44578999999988777665443333589999999999999832 23346787777
Q ss_pred CCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc-ceeEEEE
Q psy2521 300 GTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD-HHHEIIA 378 (783)
Q Consensus 300 gt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~-~~~~~~s 378 (783)
.+... ..+..... ....+.|||||++|++..... ....+........ .......... .....++
T Consensus 71 ~~~~~--~~~~~~~~---~~~~~~~spdg~~i~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 135 (269)
T d2hqsa1 71 ANGAV--RQVASFPR---HNGAPAFSPDGSKLAFALSKT-GSLNLYVMDLASG---------QIRQVTDGRSNNTEPTWF 135 (269)
T ss_dssp TTCCE--EEEECCSS---CEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTC---------CEEECCCCSSCEEEEEEC
T ss_pred ccCce--eEEeeeec---ccccceecCCCCeeeEeeecC-Cccceeecccccc---------cceeeeeccccccccccc
Confidence 65432 23333222 335688999999999887543 3355555554431 0111122222 2233588
Q ss_pred eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeee
Q psy2521 379 NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHS 458 (783)
Q Consensus 379 ~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~ 458 (783)
++++.+++.+.+.+ ...|+..+++++. ...+.... .......++.+++.+++....++...+++++...+.. +.
T Consensus 136 ~~~~~~~~~~~~~g-~~~i~~~~~~~~~---~~~~~~~~-~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~ 209 (269)
T d2hqsa1 136 PDSQNLAFTSDQAG-RPQVYKVNINGGA---PQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QV 209 (269)
T ss_dssp TTSSEEEEEECTTS-SCEEEEEETTSSC---CEECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EE
T ss_pred cccccceecccccC-CceEeeeeccccc---ceeeeccc-ccccccccccccceeEEEeecCCceeeeEeecccccc-eE
Confidence 88999988887754 4579999988765 34444333 4555566777778899999999999999999854443 33
Q ss_pred ecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 459 FPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 459 l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+. ..+....+.++||++.++|... ......+|++++
T Consensus 210 ~~-~~~~~~~p~~SPDG~~i~f~s~-~~~~~~l~~~~~ 245 (269)
T d2hqsa1 210 LS-STFLDETPSLAPNGTMVIYSSS-QGMGSVLNLVST 245 (269)
T ss_dssp CC-CSSSCEEEEECTTSSEEEEEEE-ETTEEEEEEEET
T ss_pred ee-cCccccceEECCCCCEEEEEEc-CCCCcEEEEEEC
Confidence 33 3333446778999999987643 345568999999
|
| >d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Uncharacterized protein Atu2452 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.57 E-value=3.6e-15 Score=145.50 Aligned_cols=178 Identities=15% Similarity=0.094 Sum_probs=117.9
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCC-CCChhHHhhccccCCcChHHHHHHHHHHHHH--
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGG-ELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN-- 628 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~-- 628 (783)
.+..|+||++||+.+... .|.. ....+.. ++.++.++.+..+ +++..+.. ...+.....|+..+++.+..
T Consensus 14 ~~~~P~vi~lHG~G~~~~--~~~~-~~~~l~~-~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l 86 (203)
T d2r8ba1 14 VAGAPLFVLLHGTGGDEN--QFFD-FGARLLP-QATILSPVGDVSEHGAARFFRR---TGEGVYDMVDLERATGKMADFI 86 (203)
T ss_dssp CTTSCEEEEECCTTCCHH--HHHH-HHHHHST-TSEEEEECCSEEETTEEESSCB---CGGGCBCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHH--HHHH-HHHHhcc-CCeEEEeccccccccccccccc---cCccccchhHHHHHHHHHHHHH
Confidence 456899999999755432 2222 3344543 6777777554311 11111111 12222334444444443322
Q ss_pred -c--CCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCc
Q psy2521 629 -K--KYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSP 705 (783)
Q Consensus 629 -~--~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp 705 (783)
. ..+++++|+++|+|+||.++..++..+|+.+.++++..|......
T Consensus 87 ~~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~~~~~~~~------------------------------- 135 (203)
T d2r8ba1 87 KANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP------------------------------- 135 (203)
T ss_dssp HHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-------------------------------
T ss_pred HHhhhcCCCceEEEEEecCHHHHHHHHHHhhhhcccceeeecccccccc-------------------------------
Confidence 1 236889999999999999999999999999999999888652100
Q ss_pred ccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhc
Q psy2521 706 LHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKN 780 (783)
Q Consensus 706 ~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~ 780 (783)
..+.. ..-++++++||++|++||+.++.+++++|++. |.++++++|++ ||++....-..+.+
T Consensus 136 ~~~~~-----~~~~~~~i~hG~~D~~vp~~~~~~~~~~L~~~-------g~~v~~~~~~g-gH~~~~~~~~~~~~ 197 (203)
T d2r8ba1 136 KISPA-----KPTRRVLITAGERDPICPVQLTKALEESLKAQ-------GGTVETVWHPG-GHEIRSGEIDAVRG 197 (203)
T ss_dssp CCCCC-----CTTCEEEEEEETTCTTSCHHHHHHHHHHHHHH-------SSEEEEEEESS-CSSCCHHHHHHHHH
T ss_pred ccccc-----cccchhhccccCCCCcccHHHHHHHHHHHHHC-------CCCEEEEEECC-CCcCCHHHHHHHHH
Confidence 00001 12234999999999999999999999999999 99999999986 89987655444443
|
| >d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Aclacinomycin methylesterase RdmC domain: Aclacinomycin methylesterase RdmC species: Streptomyces purpurascens [TaxId: 1924]
Probab=99.56 E-value=3.2e-14 Score=146.46 Aligned_cols=217 Identities=13% Similarity=0.109 Sum_probs=133.0
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.+|.+|.+...- +...|+||++||....+.. |...+...|.++||.|+++|.||.|...... .....
T Consensus 7 ~g~~~i~y~~~G------~~~~p~vvl~HG~~~~~~~--~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~ 73 (297)
T d1q0ra_ 7 SGDVELWSDDFG------DPADPALLLVMGGNLSALG--WPDEFARRLADGGLHVIRYDHRDTGRSTTRD-----FAAHP 73 (297)
T ss_dssp ETTEEEEEEEES------CTTSCEEEEECCTTCCGGG--SCHHHHHHHHTTTCEEEEECCTTSTTSCCCC-----TTTSC
T ss_pred ECCEEEEEEEec------CCCCCEEEEECCCCcChhH--HHHHHHHHHHhCCCEEEEEeCCCCccccccc-----ccccc
Confidence 366777665542 2346899999998665533 4444445555579999999999955432111 11112
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc--------------ccc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN--------------KFT 679 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~--------------~~~ 679 (783)
..++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..+........ ...
T Consensus 74 ~~~~~~~~d~~~ll~~--l~~~~~~lvGhS~Gg~~a~~~a~~~P~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (297)
T d1q0ra_ 74 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 151 (297)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cccchhhhhhcccccc--ccccceeeccccccchhhhhhhcccccceeeeEEEccccccccchhhhHHHhhhhhhhhhhh
Confidence 3577777766666654 345689999999999999999999999999999876643221100 000
Q ss_pred c-cccch------------------------hhh---CCCCCHHHHHHHHh----cCc-------------------ccC
Q psy2521 680 I-AYYSE------------------------SEF---GSPNNKTHFHNLLS----YSP-------------------LHN 708 (783)
Q Consensus 680 ~-~~~~~------------------------~~~---g~p~~~~~~~~~~~----~sp-------------------~~~ 708 (783)
. ...+. ... ..+.....+..+.. ... ...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (297)
T d1q0ra_ 152 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 231 (297)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred hhhHHHHHHHHHhccccchhhHHHHHHHHHHhhhccccccchHHHHHHHHHHhhhhccccchhhhhhhhhhhccccchhh
Confidence 0 00000 000 11222222111110 000 001
Q ss_pred CCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchhhhhcc
Q psy2521 709 IKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDIELKNP 781 (783)
Q Consensus 709 v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~~~~~~ 781 (783)
++ .+.+| +|+++|.+|..+++.++.++.+.+.. .++.+++++||.+.......+.+.
T Consensus 232 l~----~i~~P-vlvi~G~~D~~~~~~~~~~~~~~~p~-----------~~~~~i~~~gH~~~~e~p~~~~~~ 288 (297)
T d1q0ra_ 232 LR----EVTVP-TLVIQAEHDPIAPAPHGKHLAGLIPT-----------ARLAEIPGMGHALPSSVHGPLAEV 288 (297)
T ss_dssp GG----GCCSC-EEEEEETTCSSSCTTHHHHHHHTSTT-----------EEEEEETTCCSSCCGGGHHHHHHH
T ss_pred hh----ccCCc-eEEEEeCCCCCCCHHHHHHHHHhCCC-----------CEEEEECCCCCcchhhCHHHHHHH
Confidence 11 25677 99999999999999988777665532 478899999999876666665543
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.56 E-value=5.7e-14 Score=143.23 Aligned_cols=249 Identities=13% Similarity=0.130 Sum_probs=150.5
Q ss_pred eEEECCC--CcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 213 LYAFSDN--GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 213 ~~~~SPD--G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
++.+||| |++|||+.. | +||++|+++|+..+++........++|||||++|+|++.... ...
T Consensus 3 ~~~~sPdi~G~~v~f~~~--~----dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~----------~~~ 66 (281)
T d1k32a2 3 NLLLNPDIHGDRIIFVCC--D----DLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGS----------SLN 66 (281)
T ss_dssp CCCEEEEEETTEEEEEET--T----EEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEEST----------TCC
T ss_pred CcccCCCCCCCEEEEEeC--C----cEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCC----------CCC
Confidence 3567999 999999864 2 599999999998877765444478999999999999985432 122
Q ss_pred CceEEEEEcCCCCCCceeEEecCC---CC-eeEEEEEEecCCcEEEEEEecCCCC--cEEEEEECCCCCCCcccCCCCce
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPN---GR-SLGLHSEVTDCGRYLLVSTSNNTQG--SDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~---~~-~~~~~~~~SpDGk~l~~~~~~~~~~--~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
..+||..++.++... .|...+. .. .....+.|||||+.|++........ ..++.++..++. ..
T Consensus 67 ~~~i~~~~~~~g~~~--~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 135 (281)
T d1k32a2 67 TADLYFYNGENGEIK--RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGIN---------FV 135 (281)
T ss_dssp EEEEEEEETTTTEEE--ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTE---------EE
T ss_pred ceEEEEEEecCCceE--EeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCce---------eE
Confidence 346888887765322 2211110 01 1224678999999999876543322 556677766521 11
Q ss_pred eeecCccceeEEEEeeCCEEEEEECCCCCC--------ceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEE
Q psy2521 365 TVIPGMDHHHEIIANNGPELIVKTTKNAPK--------GKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVH 436 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~--------~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~ 436 (783)
... .......+.+++..+++........ ............ ...++... .... ..... ++.+++.
T Consensus 136 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~-~~~~~-~~~~~~~ 207 (281)
T d1k32a2 136 PLN--LGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGA---FKKIVDMS-THVS-SPVIV-GHRIYFI 207 (281)
T ss_dssp ECC--SCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTE---EEEEECCS-SCCE-EEEEE-TTEEEEE
T ss_pred Eec--CCccceeeecCCCeEEEeeccccceeeeeccCCcceeeeeccccc---eeeccCCc-cccc-eeeee-cccccee
Confidence 111 1112235777887777765433211 111111111111 12222222 2222 22333 3788888
Q ss_pred EecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEE
Q psy2521 437 YIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIF 511 (783)
Q Consensus 437 ~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~ 511 (783)
...++..+|+++|+ +|+..+.|+.. ...+. ++++|++.|+|... ..+|.+|+ +++ +.+.+
T Consensus 208 ~~~~~~~~l~~~d~-~g~~~~~lt~~~~~~~~--~~SpDG~~I~f~~~-----~~l~~~d~-----~~g--~~~~i 268 (281)
T d1k32a2 208 TDIDGFGQIYSTDL-DGKDLRKHTSFTDYYPR--HLNTDGRRILFSKG-----GSIYIFNP-----DTE--KIEKI 268 (281)
T ss_dssp ECTTSSCEEEEEET-TSCSCEECCCCCSSCEE--EEEESSSCEEEEET-----TEEEEECT-----TTC--CEEEC
T ss_pred cccccccceEEEeC-CCCceEEeecCCCcccc--cCcCCCCEEEEEeC-----CEEEEEEC-----CCC--CEEEe
Confidence 88889999999999 45555777754 33332 35688988887543 47999999 567 55554
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.5e-13 Score=149.64 Aligned_cols=285 Identities=13% Similarity=0.085 Sum_probs=172.4
Q ss_pred EEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC----CceEEEEEEECCCCcccccccc---ccc
Q psy2521 184 LYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG----SDWNTLHIKDVDTGKDYPEVLK---NVK 256 (783)
Q Consensus 184 l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G----~d~~~i~v~Dl~tg~~~~~~~~---~~~ 256 (783)
|+..+..++.+++|++...+..- ....+.|||||++|+|..+... +-...++++|+++|+..++... ...
T Consensus 39 i~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~ 115 (465)
T d1xfda1 39 VRLWNVETNTSTVLIEGKKIESL---RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAK 115 (465)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTT---TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCC
T ss_pred EEEEECCCCCEEEEEcCcccccc---ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccc
Confidence 56666656788899998776532 2456889999999999876432 1224799999999986654322 223
Q ss_pred cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCC---------------eeEEE
Q psy2521 257 FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGR---------------SLGLH 321 (783)
Q Consensus 257 ~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~---------------~~~~~ 321 (783)
...+.|||||+.|+|++. ..||+..+.++.. .+++.....+. ....+
T Consensus 116 l~~~~wSPDG~~iafv~~-----------------~nl~~~~~~~~~~-~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a 177 (465)
T d1xfda1 116 LQYAGWGPKGQQLIFIFE-----------------NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (465)
T ss_dssp CSBCCBCSSTTCEEEEET-----------------TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred cceeeeccCCceEEEEec-----------------ceEEEEecCCCce-EEEecccCcceeeccccchhhhhhhccccce
Confidence 346899999999999982 2466665544321 11222111110 11246
Q ss_pred EEEecCCcEEEEEEecCCC------------------------------CcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 322 SEVTDCGRYLLVSTSNNTQ------------------------------GSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 322 ~~~SpDGk~l~~~~~~~~~------------------------------~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
+.|||||++|+|...+.+. ...|+++|++++..... ..+.. ... ..
T Consensus 178 ~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~--~~~~~-~~~-~~ 253 (465)
T d1xfda1 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE--MMPPD-DPR-MR 253 (465)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE--CCCCC-CGG-GS
T ss_pred EEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEE--EeccC-cCc-cc
Confidence 7799999999997532110 02577888866311100 00000 000 01
Q ss_pred cee---EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCce-----EEEEEEeeCCEEEEE--EecCC
Q psy2521 372 HHH---EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRT-----LDVVAAVANNKLIVH--YIQNV 441 (783)
Q Consensus 372 ~~~---~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~-----l~~~~~~~g~~l~~~--~~~~g 441 (783)
..+ ..|+++++.+++..++......|+.+|..++. .+.++.+..+.. ....+..+|+.+++. ..++|
T Consensus 254 ~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~---~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g 330 (465)
T d1xfda1 254 EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG 330 (465)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred cceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCc---EEEEEEEcCCceEeccCCceeEccCCCeeEEEEeeeecc
Confidence 111 14888887666677888878889999998876 555655443221 123456666665543 45677
Q ss_pred eeEEEEEECC------CCceeeeecCCCeEEEee-eccccccEEEEEEecCCCCce--EEEEeCC
Q psy2521 442 RSVMDLHDLN------TGKRLHSFPLDLGQITHI-SGRRKYNEVFYGFTSFLQPGT--IYHCNIP 497 (783)
Q Consensus 442 ~~~l~~~dl~------~G~~~~~l~~~~g~v~~~-s~~~d~~~l~~~~ss~~~P~~--vy~~d~~ 497 (783)
..+++.+.+. +|+.++.|+.....|..+ .++.+++.+||..+ ...|.. +|++++.
T Consensus 331 ~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~-~~~p~~~hly~v~l~ 394 (465)
T d1xfda1 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLST-EDLPRRRQLYSANTV 394 (465)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEES-SSCTTCCEEEEECSS
T ss_pred cCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEe-CCCCCceEEEEEECC
Confidence 7778777531 355556777655555443 45677788888654 445654 8888883
|
| >d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A1 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.54 E-value=1.6e-13 Score=139.02 Aligned_cols=119 Identities=13% Similarity=0.077 Sum_probs=79.7
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
+++++||.++..... |..|+||++||..+.+.. |......++. +||.|+++|+||.|... .
T Consensus 2 ~~~t~dG~~l~y~~~--------G~g~~ivlvHG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~G~G~S~--------~ 62 (274)
T d1a8qa_ 2 ICTTRDGVEIFYKDW--------GQGRPVVFIHGWPLNGDA--WQDQLKAVVD-AGYRGIAHDRRGHGHST--------P 62 (274)
T ss_dssp EEECTTSCEEEEEEE--------CSSSEEEEECCTTCCGGG--GHHHHHHHHH-TTCEEEEECCTTSTTSC--------C
T ss_pred eEECcCCCEEEEEEE--------CCCCeEEEECCCCCCHHH--HHHHHHHHHH-CCCEEEEEeCCCCcccc--------c
Confidence 578999998876543 234678899998766543 4444434444 69999999999955432 1
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHH-hcCCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACL-NQRPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~-~~~p~lf~a~i~~~~~ 669 (783)
......+.++...+..+++. ...+++.++|||+||.+++..+ ...|+++++++...+.
T Consensus 63 ~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~~~~~~~a~~~p~~v~~~~~~~~~ 121 (274)
T d1a8qa_ 63 VWDGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAI 121 (274)
T ss_dssp CSSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccccccchhhHHHHHHHHHH--hhhhhhcccccccccchHHHHHHHhhhccceeEEEEecc
Confidence 12233455555544444443 2346899999999999888755 4568989888877653
|
| >d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the cellulosomal xylanase y {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase domain: Feruloyl esterase domain of the cellulosomal xylanase y species: Clostridium thermocellum [TaxId: 1515]
Probab=99.53 E-value=3.8e-15 Score=152.34 Aligned_cols=222 Identities=12% Similarity=-0.008 Sum_probs=135.7
Q ss_pred CeEEEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCC-cCcHHH-------HHHHHcCCEEEEEecCCC
Q psy2521 524 FQTKQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLP-TFSISR-------CMFLRHFNGIYAIPNIRG 595 (783)
Q Consensus 524 ~~~~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~-------~~~l~~~G~~v~~~~~RG 595 (783)
-+++++++++.+|++ ++.++.|+++++++++|+|+++||+.+..... .+.... .......+++++.++.++
T Consensus 25 g~v~~~~~~~~~~~r-~~~vylP~~y~~~k~yPvl~~lhG~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 103 (273)
T d1wb4a1 25 GRIVKETYTGINGTK-SLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 103 (273)
T ss_dssp CEEEEEEEEETTEEE-EEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHHTSSCCEEEEECCSCS
T ss_pred CeEEEEEEecCCCeE-EEEEEeCCCCCCCCCceEEEEEeCCCCCcchhhhhccchhHHHHhhhhhhccCCceeeccccCC
Confidence 478999999999864 99999999998888999999999987654332 122111 111112368999999998
Q ss_pred CCCCChhHHhhccccCCcCh-HHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhh
Q psy2521 596 GGELGEDWHNAGRLLKKQNC-FDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLR 674 (783)
Q Consensus 596 ~g~~G~~~~~~g~~~~~~~~-~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~ 674 (783)
+...+..+............ ..++...+..+..+..+|++|++|+|+|+||++++.++.++||+|+++++.+|..+...
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~i~G~S~GG~~a~~~a~~~pd~f~a~~~~sg~~~~~~ 183 (273)
T d1wb4a1 104 GNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGN 183 (273)
T ss_dssp TTCCTTTHHHHHHHTHHHHHHHHSCCSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCBSS
T ss_pred CCCccccchhcccccccchhhhhhhhhhhhhhhhcccCCccceEEEeeCCcchhhhhhhhcCCCcceEEEEeCcccccCC
Confidence 77777666554322111110 11111122222333447999999999999999999999999999999999999775433
Q ss_pred cccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhC---CC
Q psy2521 675 FNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIG---SL 751 (783)
Q Consensus 675 ~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~---~~ 751 (783)
..... . ......... ..... ..+.+++.+|..|. .......+.+.+..... ..
T Consensus 184 ~~~~~--------~-----~~~~~~~~~----~~~~~-----~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (273)
T d1wb4a1 184 SPQDK--------A-----NSIAEAINR----SGLSK-----REYFVFAATGSEDI--AYANMNPQIEAMKALPHFDYTS 239 (273)
T ss_dssp SHHHH--------H-----HHHHHHHHH----HTCCT-----TSCEEEEEEETTCT--THHHHHHHHHHHHTSTTCCBBS
T ss_pred Ccccc--------c-----ccchhhhhh----hhhcc-----cceEEEEecCCCCc--ccccchhHHHHHHHHHHHHHHH
Confidence 21100 0 000000000 01111 11226777777664 44555555555543211 11
Q ss_pred CCCCCcEEEEEeCCCCccC
Q psy2521 752 PYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 752 ~~~~~~~~l~~~~~~gHg~ 770 (783)
...+..+.+.+++++||..
T Consensus 240 ~~~~~~~~~~~~~~ggH~w 258 (273)
T d1wb4a1 240 DFSKGNFYFLVAPGATHWW 258 (273)
T ss_dssp CTTTCCEEEEEETTCCSSH
T ss_pred HhcCCCEEEEEECCCccCH
Confidence 2336678888899999964
|
| >d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Mycobacterial antigens domain: Antigen 85c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.53 E-value=4.7e-14 Score=144.92 Aligned_cols=226 Identities=13% Similarity=0.055 Sum_probs=147.8
Q ss_pred CeEEEEEEECC-CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH--HHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 524 FQTKQVYFRSK-DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI--SRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 524 ~~~~~~~~~s~-dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
+.++.++++|. -|..|++.+. .++.|+|++.||..+......|.. ...+++++.|++|++++-..++ +.
T Consensus 4 ~~v~~~~~~s~~~~r~i~~~~~-------~~~~p~lyllhG~~g~~d~~~W~~~~~~~~~~~~~~~ivV~P~~~~~~-~~ 75 (280)
T d1dqza_ 4 LPVEYLQVPSASMGRDIKVQFQ-------GGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSS-FY 75 (280)
T ss_dssp SCEEEEEEEETTTTEEEEEEEE-------CCSSSEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTC-TT
T ss_pred cEEEEEEEecccCCCcceEEee-------CCCCCEEEECCCCCCCCccchhhhcchHHHHHHhCCcEEEEECCCCCC-cC
Confidence 35677777664 6788998873 246799999999655433223332 2456777889999999954333 44
Q ss_pred hhHHhhcccc--CCcChHHHHH--HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc
Q psy2521 601 EDWHNAGRLL--KKQNCFDDFQ--AAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN 676 (783)
Q Consensus 601 ~~~~~~g~~~--~~~~~~~D~~--a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~ 676 (783)
..|+...... .+...+++++ +.+.+|.++..+|++|++|.|+||||++++.++.++|++|+++++.+|.++.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~~~~~d~~r~~i~G~SmGG~~Al~lA~~~Pd~F~av~s~SG~~~~~~~~ 155 (280)
T d1dqza_ 76 TDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESW 155 (280)
T ss_dssp SBCSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTT
T ss_pred ccccCCcccccCCcchhHHHHHHHHHHHHHHHhcCCCCCceEEEEechHHHHHHHHHHhCcCceeEEEEecCccCcccCc
Confidence 4555433222 2233455543 45677777767899999999999999999999999999999999999998764321
Q ss_pred ccc---------ccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCC--------------
Q psy2521 677 KFT---------IAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVP-------------- 733 (783)
Q Consensus 677 ~~~---------~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~-------------- 733 (783)
... .+......||.+..+ ....++|+.+++..+ .+-+++++.+|..|....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~e~~~ 229 (280)
T d1dqza_ 156 WPTLIGLAMNDSGGYNANSMWGPSSDP----AWKRNDPMVQIPRLV--ANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLT 229 (280)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHCSTTSH----HHHHTCTTTTHHHHH--HHTCEEEEECCCSCCCTTCCCSHHHHHHHHHH
T ss_pred chhhhhhhHhhccCCCHhhccCCcchh----hhhhcCHHHHHHHhh--hcCCeEEEEeCCCCCccccccccccchhhHHH
Confidence 100 001112234544443 245778887765410 122348999999887654
Q ss_pred cHHHHHHHHHHHhhhCCCCCCCCc-EEEEEeCCCCccC
Q psy2521 734 PLHSYKFIATLQEKIGSLPYQKNP-LLLRVEQDAGHGQ 770 (783)
Q Consensus 734 ~~~~~~~~~~L~~~~~~~~~~~~~-~~l~~~~~~gHg~ 770 (783)
...+.++.++|.++ +.+ +.+.+.++.||..
T Consensus 230 ~~~~~~~~~~l~~~-------g~~~~~~~~~~~GgH~W 260 (280)
T d1dqza_ 230 LRTNQTFRDTYAAD-------GGRNGVFNFPPNGTHSW 260 (280)
T ss_dssp HHHHHHHHHHHHHT-------TCCSEEEECCSCCCSSH
T ss_pred HHHHHHHHHHHHHc-------CCCeEEEEEcCCCccCc
Confidence 24567788888877 544 4544455678975
|
| >d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline iminopeptidase species: Xanthomonas campestris, pv. citri [TaxId: 339]
Probab=99.52 E-value=9.1e-14 Score=144.84 Aligned_cols=125 Identities=15% Similarity=0.048 Sum_probs=89.7
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
++-++.+.||.+|....+-. .+.|.||++||+++....+... ...+ ..||.|+++|.|| +|.+-.
T Consensus 12 ~~~~i~~~dg~~i~y~~~G~------~~g~pvvllHG~~g~~~~~~~~---~~~l-~~~~~Vi~~D~rG---~G~S~~-- 76 (313)
T d1azwa_ 12 QQGSLKVDDRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDKMR---RFHD-PAKYRIVLFDQRG---SGRSTP-- 76 (313)
T ss_dssp EEEEEECSSSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGGGG---GGSC-TTTEEEEEECCTT---STTSBS--
T ss_pred CCCEEEeCCCcEEEEEEecC------CCCCEEEEECCCCCCccchHHH---hHHh-hcCCEEEEEeccc---cCCCCc--
Confidence 56667788999888776532 2346788899998776554332 1223 4599999999999 443311
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
........++|+.+.+..++++ ...+++.|+|||+||.++..++.++|+++++++...+.
T Consensus 77 -~~~~~~~~~~~~~~dl~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv~~~~~ 136 (313)
T d1azwa_ 77 -HADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp -TTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred -cccccchhHHHHHHHHHHHHHh--hccccceeEEecCCcHHHHHHHHHhhhceeeeeEeccc
Confidence 1123334577777777777765 33468999999999999999999999999999887664
|
| >d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Ccg1/TafII250-interacting factor B (Cib) domain: Ccg1/TafII250-interacting factor B (Cib) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=5.9e-15 Score=144.63 Aligned_cols=182 Identities=12% Similarity=0.028 Sum_probs=114.3
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
++-++. .+|.+|.+....|.. ....|+||++||..+....+.... ....|+++||.|+++|+|| +|++-...
T Consensus 7 ~e~~i~-v~G~~i~y~~~~~~~---~~~~~~vvllHG~~~~~~~w~~~~-~~~~la~~gy~via~D~~G---~G~S~~~~ 78 (208)
T d1imja_ 7 REGTIQ-VQGQALFFREALPGS---GQARFSVLLLHGIRFSSETWQNLG-TLHRLAQAGYRAVAIDLPG---LGHSKEAA 78 (208)
T ss_dssp CCCCEE-ETTEEECEEEEECSS---SCCSCEEEECCCTTCCHHHHHHHT-HHHHHHHTTCEEEEECCTT---SGGGTTSC
T ss_pred eEEEEE-ECCEEEEEEEecCCC---CCCCCeEEEECCCCCChhHHhhhH-HHHHHHHcCCeEEEeeccc---ccCCCCCC
Confidence 333343 489999887777653 346788999999876654322211 2344566799999999999 44332221
Q ss_pred ccccCCc-ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcccccccccch
Q psy2521 607 GRLLKKQ-NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNKFTIAYYSE 685 (783)
Q Consensus 607 g~~~~~~-~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~ 685 (783)
....... ...+++.+.++.+ +.+++.|+|+|+||.+++.++.++|+.++++|+..|+.-
T Consensus 79 ~~~~~~~~~~~~~l~~~~~~l------~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lV~~~p~~~-------------- 138 (208)
T d1imja_ 79 APAPIGELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICT-------------- 138 (208)
T ss_dssp CSSCTTSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCG--------------
T ss_pred cccccchhhhhhhhhhccccc------ccccccccccCcHHHHHHHHHHHhhhhcceeeecCcccc--------------
Confidence 1111111 1123333344433 235789999999999999999999999999999887431
Q ss_pred hhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCC
Q psy2521 686 SEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQD 765 (783)
Q Consensus 686 ~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~ 765 (783)
.++ ..+.+ .+ +++| +|+++|++|..+|.. . +.++.. ....+.++++
T Consensus 139 ~~~----~~~~~---------~~-------i~~P-~Lii~G~~D~~~~~~--~---~~~~~~--------~~~~~~~i~~ 184 (208)
T d1imja_ 139 DKI----NAANY---------AS-------VKTP-ALIVYGDQDPMGQTS--F---EHLKQL--------PNHRVLIMKG 184 (208)
T ss_dssp GGS----CHHHH---------HT-------CCSC-EEEEEETTCHHHHHH--H---HHHTTS--------SSEEEEEETT
T ss_pred ccc----ccccc---------cc-------cccc-cccccCCcCcCCcHH--H---HHHHhC--------CCCeEEEECC
Confidence 000 11111 23 4455 999999999876643 1 223322 2367889999
Q ss_pred CCccC
Q psy2521 766 AGHGQ 770 (783)
Q Consensus 766 ~gHg~ 770 (783)
+||..
T Consensus 185 ~gH~~ 189 (208)
T d1imja_ 185 AGHPC 189 (208)
T ss_dssp CCTTH
T ss_pred CCCch
Confidence 99974
|
| >d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Rhodococcus sp., strain rha1 [TaxId: 1831]
Probab=99.49 E-value=3.3e-14 Score=145.24 Aligned_cols=122 Identities=12% Similarity=0.053 Sum_probs=76.3
Q ss_pred CCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 535 DGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 535 dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
++.+++....- +...|+||++||..+.... ..|... ...|++ ||.|+++|.||.|... ..........
T Consensus 12 ~~~~~h~~~~G------~~~~p~ivllHG~~~~~~~~~~~~~~-~~~L~~-~~~vi~~D~~G~G~S~---~~~~~~~~~~ 80 (281)
T d1c4xa_ 12 GTLASHALVAG------DPQSPAVVLLHGAGPGAHAASNWRPI-IPDLAE-NFFVVAPDLIGFGQSE---YPETYPGHIM 80 (281)
T ss_dssp TTSCEEEEEES------CTTSCEEEEECCCSTTCCHHHHHGGG-HHHHHT-TSEEEEECCTTSTTSC---CCSSCCSSHH
T ss_pred CCEEEEEEEEe------cCCCCEEEEECCCCCCCcHHHHHHHH-HHHHhC-CCEEEEEeCCCCcccc---ccccccccch
Confidence 55666665532 2346899999997554332 223332 355664 9999999999944322 1111111111
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..+++.+..+..++++- ..+++.++|||+||.++..++.++|++++++|+..+.
T Consensus 81 ~~~~~~~~~i~~~i~~~--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvli~~~ 134 (281)
T d1c4xa_ 81 SWVGMRVEQILGLMNHF--GIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 134 (281)
T ss_dssp HHHHHHHHHHHHHHHHH--TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred hhHHHhhhhcccccccc--ccccceeccccccccccccccccccccccceEEeccc
Confidence 22334444333333331 2358999999999999999999999999999987764
|
| >d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta-cleavage product hydrolase CumD species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.49 E-value=1.3e-13 Score=139.62 Aligned_cols=205 Identities=16% Similarity=0.075 Sum_probs=122.8
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
..||.++.+... |..|.||++||..+.... ..|.. ....|+ .||.|+++|+||.|.... ...
T Consensus 9 ~~~G~~~~Y~~~--------G~G~pvvllHG~~~~~~~~~~~~~-~~~~l~-~~~~vi~~Dl~G~G~S~~-------~~~ 71 (271)
T d1uk8a_ 9 LAAGVLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRL-TIPALS-KFYRVIAPDMVGFGFTDR-------PEN 71 (271)
T ss_dssp EETTEEEEEEEE--------CCSSEEEEECCCSTTCCHHHHHTT-THHHHT-TTSEEEEECCTTSTTSCC-------CTT
T ss_pred EECCEEEEEEEE--------eeCCeEEEECCCCCCccHHHHHHH-HHHHHh-CCCEEEEEeCCCCCCccc-------ccc
Confidence 458888875432 234678899997654322 12322 234565 499999999999554321 112
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-------cccccccc
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-------KFTIAYYS 684 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-------~~~~~~~~ 684 (783)
....++++...+..+++. .+.+++.++|||+||.+++.++.++|+.+.++|+..+........ .......+
T Consensus 72 ~~~~~~~~~~~~~~~~~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (271)
T d1uk8a_ 72 YNYSKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIEN 149 (271)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHH
T ss_pred ccccccccchhhhhhhhh--hcCCCceEeeccccceeehHHHHhhhccchheeecccCCCcccchhhhhhhhhccchhHH
Confidence 233467777777777765 344689999999999999999999999999999876643211000 00000000
Q ss_pred ----hhhhCCC---CCHH-------------HHHHHHhcC-------------cccCCCCCCCCCcCCcEEEEecCCCCC
Q psy2521 685 ----ESEFGSP---NNKT-------------HFHNLLSYS-------------PLHNIKVPPNNTQYPATLVLTGDHDDR 731 (783)
Q Consensus 685 ----~~~~g~p---~~~~-------------~~~~~~~~s-------------p~~~v~~~~~~~~~P~~Li~~g~~D~~ 731 (783)
...+... .... ..+.+.... ....++. ++.| +|+++|++|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~ 224 (271)
T d1uk8a_ 150 MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKT----LPNE-TLIIHGREDQV 224 (271)
T ss_dssp HHHHHHHHCSCGGGCCHHHHHHHHHHHTSTTHHHHHHTTSCSSTHHHHHHHCCCHHHHTT----CCSC-EEEEEETTCSS
T ss_pred HHHHHHHHhhhcccchhHHHHHHHhhhhchhHHHHHHhhcchhhhhhhhhccccHHHHHh----hccc-eeEEecCCCCC
Confidence 0000000 0000 000011111 1111222 5677 99999999999
Q ss_pred CCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 732 VPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 732 V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+++..+..+.+.+.. .++.+++++||...-
T Consensus 225 ~~~~~~~~~~~~~~~-----------~~~~~~~~~gH~~~~ 254 (271)
T d1uk8a_ 225 VPLSSSLRLGELIDR-----------AQLHVFGRCGHWTQI 254 (271)
T ss_dssp SCHHHHHHHHHHCTT-----------EEEEEESSCCSCHHH
T ss_pred cCHHHHHHHHHhCCC-----------CEEEEECCCCCchHH
Confidence 999888777665532 478899999997543
|
| >d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/lipase domain: Carboxylesterase Est species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.49 E-value=4.5e-14 Score=139.03 Aligned_cols=193 Identities=15% Similarity=0.105 Sum_probs=111.5
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
..+.||++||..+.... |.. ....|+++||.|+++|+||.|... ..... ........|....+.++... +
T Consensus 10 ~~~~vvliHG~~~~~~~--~~~-l~~~L~~~G~~v~~~D~~G~G~s~---~~~~~-~~~~~~~~~~~~~~~~~~~~---~ 79 (242)
T d1tqha_ 10 GERAVLLLHGFTGNSAD--VRM-LGRFLESKGYTCHAPIYKGHGVPP---EELVH-TGPDDWWQDVMNGYEFLKNK---G 79 (242)
T ss_dssp SSCEEEEECCTTCCTHH--HHH-HHHHHHHTTCEEEECCCTTSSSCH---HHHTT-CCHHHHHHHHHHHHHHHHHH---T
T ss_pred CCCeEEEECCCCCCHHH--HHH-HHHHHHHCCCEEEEEeCCCCcccc---ccccc-cchhHHHHHHHHHHhhhhhc---c
Confidence 34678889998765532 433 445666679999999999965433 22111 11122334555555555443 3
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc--cc-cccccchh--------------hhCCC--CCH
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN--KF-TIAYYSES--------------EFGSP--NNK 694 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~--~~-~~~~~~~~--------------~~g~p--~~~ 694 (783)
.+++.++|+|+||.++..++.++|.....+++........... .. .....+.. .+... ...
T Consensus 80 ~~~~~l~G~S~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (242)
T d1tqha_ 80 YEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTL 159 (242)
T ss_dssp CCCEEEEEETHHHHHHHHHHTTSCCSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCTTH
T ss_pred cCceEEEEcchHHHHhhhhcccCcccccccccccccccchhHHHHHHHHHHHHHhhhccchhhhHHHHHhhhhhhccchh
Confidence 4689999999999999999999998755444333222111000 00 00000000 01111 111
Q ss_pred HHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 695 THFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 695 ~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
.... .........+.. +..| +|+++|.+|..|++..+.++++.++ +..+++.+++++||...
T Consensus 160 ~~~~-~~~~~~~~~~~~----~~~p-~lii~g~~D~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~gH~~~ 221 (242)
T d1tqha_ 160 KALQ-ELIADVRDHLDL----IYAP-TFVVQARHDEMINPDSANIIYNEIE---------SPVKQIKWYEQSGHVIT 221 (242)
T ss_dssp HHHH-HHHHHHHHTGGG----CCSC-EEEEEETTCSSSCTTHHHHHHHHCC---------CSSEEEEEETTCCSSGG
T ss_pred hccc-ccccccccccce----eccc-cceeecccCCccCHHHHHHHHHHcC---------CCCcEEEEECCCCCcCc
Confidence 1000 000111122222 4555 9999999999999999998887764 23578999999999864
|
| >d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: Meta cleavage compound hydrolase CarC species: Janthinobacterium sp. J3 [TaxId: 213804]
Probab=99.48 E-value=1.1e-13 Score=139.75 Aligned_cols=204 Identities=17% Similarity=0.135 Sum_probs=121.0
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccC-CcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVL-PTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
.||.++.... . |..|.||++||..+.... ..|... ...|+ +||.|+++|.||.|... ....
T Consensus 9 ~dg~~l~y~~---~-----G~g~~vvllHG~~~~~~~~~~~~~~-~~~l~-~~~~v~~~D~~G~G~S~--------~~~~ 70 (268)
T d1j1ia_ 9 AGGVETRYLE---A-----GKGQPVILIHGGGAGAESEGNWRNV-IPILA-RHYRVIAMDMLGFGKTA--------KPDI 70 (268)
T ss_dssp ETTEEEEEEE---E-----CCSSEEEEECCCSTTCCHHHHHTTT-HHHHT-TTSEEEEECCTTSTTSC--------CCSS
T ss_pred ECCEEEEEEE---E-----cCCCeEEEECCCCCCccHHHHHHHH-HHHHh-cCCEEEEEccccccccc--------CCcc
Confidence 4899887542 2 234678899998654422 223333 35566 49999999999955322 1222
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhcc-------cccccc---
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFN-------KFTIAY--- 682 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~-------~~~~~~--- 682 (783)
...++++...+..+++.-.. .+++.++|+|+||.+++.++.++|++++++|+..|..-..... ......
T Consensus 71 ~~~~~~~~~~~~~~i~~l~~-~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (268)
T d1j1ia_ 71 EYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGM 149 (268)
T ss_dssp CCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHH
T ss_pred ccccccccccchhhHHHhhh-cccceeeeccccccccchhhccChHhhheeeecCCCccccccchhhhhhhhhhhhhhhh
Confidence 34456666666655554222 2478999999999999999999999999998876632211100 000000
Q ss_pred -cchhhh---CCCCCHHH--------------------HHHHHhcCcc----cCCCCCCCCCcCCcEEEEecCCCCCCCc
Q psy2521 683 -YSESEF---GSPNNKTH--------------------FHNLLSYSPL----HNIKVPPNNTQYPATLVLTGDHDDRVPP 734 (783)
Q Consensus 683 -~~~~~~---g~p~~~~~--------------------~~~~~~~sp~----~~v~~~~~~~~~P~~Li~~g~~D~~V~~ 734 (783)
...... +.....+. ...+....-. ..++. +..| +|+++|++|..+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~l~i~G~~D~~~~~ 224 (268)
T d1j1ia_ 150 VHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK----VQVP-TLVVQGKDDKVVPV 224 (268)
T ss_dssp HHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTT----CCSC-EEEEEETTCSSSCH
T ss_pred HHHHHHHhhhhhhhhhhhhHHHHHhhhhhhhhhhhhhhhhhhhccccccchhhhHhh----CCCC-EEEEEeCCCCCCCH
Confidence 000000 00011000 0011111111 11222 5677 99999999999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCc
Q psy2521 735 LHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGK 772 (783)
Q Consensus 735 ~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~ 772 (783)
+.+.++.+.+.. .++.+++++||...-
T Consensus 225 ~~~~~~~~~~~~-----------~~~~~~~~~gH~~~~ 251 (268)
T d1j1ia_ 225 ETAYKFLDLIDD-----------SWGYIIPHCGHWAMI 251 (268)
T ss_dssp HHHHHHHHHCTT-----------EEEEEESSCCSCHHH
T ss_pred HHHHHHHHhCCC-----------CEEEEECCCCCchHH
Confidence 888777665532 478999999998643
|
| >d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase L species: Streptomyces lividans [TaxId: 1916]
Probab=99.48 E-value=1.1e-13 Score=140.18 Aligned_cols=121 Identities=14% Similarity=0.118 Sum_probs=82.4
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++++.||.+|.+..+-|+ ..|+||++||.++.... |......++. +||.|+++|+||.|....
T Consensus 2 ~i~~~dG~~l~y~~~G~~------~~~~vv~lHG~~~~~~~--~~~~~~~l~~-~g~~vi~~D~~G~G~s~~-------- 64 (275)
T d1a88a_ 2 TVTTSDGTNIFYKDWGPR------DGLPVVFHHGWPLSADD--WDNQMLFFLS-HGYRVIAHDRRGHGRSDQ-------- 64 (275)
T ss_dssp EEECTTSCEEEEEEESCT------TSCEEEEECCTTCCGGG--GHHHHHHHHH-TTCEEEEECCTTSTTSCC--------
T ss_pred EEEecCCCEEEEEEecCC------CCCeEEEECCCCCCHHH--HHHHHHHHHh-CCCEEEEEeccccccccc--------
Confidence 578899999988776543 34678999998776543 5444444444 699999999999553321
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeCh-hHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSN-GGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~-GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
......++++.+.+..+++. .+.+++.++|+|+ ||.++..++.++|++++.+|...+.
T Consensus 65 ~~~~~~~~~~~~~~~~~l~~--l~~~~~~~vg~s~~G~~~~~~~a~~~p~~v~~lvl~~~~ 123 (275)
T d1a88a_ 65 PSTGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp CSSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred cccccccccccccccccccc--ccccccccccccccccchhhcccccCcchhhhhhhhccc
Confidence 11223455555555555543 2346788999997 5566666778899999998887653
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.48 E-value=4.1e-12 Score=133.42 Aligned_cols=182 Identities=10% Similarity=0.029 Sum_probs=120.3
Q ss_pred cEE-eCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEE
Q psy2521 163 PQR-QENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKD 241 (783)
Q Consensus 163 p~~-~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~D 241 (783)
.+| +|.++.+..+ ..+|+.+..++....+.. ...+..++|||||++|+++....| ..|+++|
T Consensus 10 fSP~dG~~~a~~~~------g~v~v~d~~~~~~~~~~~--------~~~v~~~~~spDg~~l~~~~~~~g---~~v~v~d 72 (360)
T d1k32a3 10 FSPLDGDLIAFVSR------GQAFIQDVSGTYVLKVPE--------PLRIRYVRRGGDTKVAFIHGTREG---DFLGIYD 72 (360)
T ss_dssp EEECGGGCEEEEET------TEEEEECTTSSBEEECSC--------CSCEEEEEECSSSEEEEEEEETTE---EEEEEEE
T ss_pred ccCCCCCEEEEEEC------CeEEEEECCCCcEEEccC--------CCCEEEEEECCCCCEEEEEEcCCC---CEEEEEE
Confidence 467 8888887642 256777764444333211 123778999999999999887544 4699999
Q ss_pred CCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEE
Q psy2521 242 VDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLH 321 (783)
Q Consensus 242 l~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~ 321 (783)
+++|+.............++|||||+.|++... ...++.+++.+... ..+...... ....
T Consensus 73 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~--~~~~ 132 (360)
T d1k32a3 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND----------------RFEIMTVDLETGKP--TVIERSREA--MITD 132 (360)
T ss_dssp TTTCCEEECCCCCCSEEEEEECTTSSEEEEEET----------------TSEEEEEETTTCCE--EEEEECSSS--CCCC
T ss_pred CCCCcEEEeeCCCceEEeeeecccccccceecc----------------ccccccccccccce--eeeeecccc--cccc
Confidence 999987655443333457899999999998872 23688888876532 233333221 2346
Q ss_pred EEEecCCcEEEEEEecCCC------CcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECC
Q psy2521 322 SEVTDCGRYLLVSTSNNTQ------GSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTK 390 (783)
Q Consensus 322 ~~~SpDGk~l~~~~~~~~~------~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~ 390 (783)
+.|||||++|++....... ...++++++.++. ...+........ ..|+|||+.|++.+++
T Consensus 133 ~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~---------~~~~~~~~~~~~~~~~spdg~~l~~~s~~ 199 (360)
T d1k32a3 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---------IFAATTENSHDYAPAFDADSKNLYYLSYR 199 (360)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---------EEECSCSSSBEEEEEECTTSCEEEEEESC
T ss_pred hhhccceeeeeeeccccccceeeccccceeeeccccCc---------eeeecccccccccccccCCCCEEEEEeCC
Confidence 8999999999987654321 2568899998731 122222222222 2699999999998765
|
| >d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Tricorn interacting factor F1 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.48 E-value=2.5e-14 Score=145.86 Aligned_cols=123 Identities=16% Similarity=0.089 Sum_probs=82.9
Q ss_pred ECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccC
Q psy2521 532 RSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLK 611 (783)
Q Consensus 532 ~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~ 611 (783)
...||.+|.....-. ....|+||++||+++.+.. |......++. +||.|+++|+||.|... .. ..
T Consensus 7 ~~~~g~~i~y~~~g~-----~~~~~~iv~lHG~~g~~~~--~~~~~~~~~~-~~~~vi~~D~~G~G~S~---~~----~~ 71 (290)
T d1mtza_ 7 AKVNGIYIYYKLCKA-----PEEKAKLMTMHGGPGMSHD--YLLSLRDMTK-EGITVLFYDQFGCGRSE---EP----DQ 71 (290)
T ss_dssp EEETTEEEEEEEECC-----SSCSEEEEEECCTTTCCSG--GGGGGGGGGG-GTEEEEEECCTTSTTSC---CC----CG
T ss_pred EEECCEEEEEEEcCC-----CCCCCeEEEECCCCCchHH--HHHHHHHHHH-CCCEEEEEeCCCCcccc---cc----cc
Confidence 345899997665432 2345889999999876653 3333334454 59999999999954322 11 11
Q ss_pred CcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 612 KQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
....++++...+..++++- ...+++.++|||+||.++..++.++|+.++++|...++.
T Consensus 72 ~~~~~~~~~~~l~~ll~~l-~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (290)
T d1mtza_ 72 SKFTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLS 129 (290)
T ss_dssp GGCSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCS
T ss_pred ccccccchhhhhhhhhccc-ccccccceecccccchhhhhhhhcChhhheeeeeccccc
Confidence 2233445544444444321 123589999999999999999999999999999887754
|
| >d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Chloroperoxidase F species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.46 E-value=3.1e-13 Score=136.58 Aligned_cols=119 Identities=17% Similarity=0.139 Sum_probs=78.8
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
+|++.||.+|.+... |..|.||++||.++.... |.... ..|.++||.|+++|.||.|....
T Consensus 2 ~f~~~dG~~i~y~~~--------G~g~pvvllHG~~~~~~~--~~~~~-~~l~~~~~~vi~~D~~G~G~S~~-------- 62 (273)
T d1a8sa_ 2 TFTTRDGTQIYYKDW--------GSGQPIVFSHGWPLNADS--WESQM-IFLAAQGYRVIAHDRRGHGRSSQ-------- 62 (273)
T ss_dssp EEECTTSCEEEEEEE--------SCSSEEEEECCTTCCGGG--GHHHH-HHHHHTTCEEEEECCTTSTTSCC--------
T ss_pred EEEeeCCcEEEEEEE--------CCCCeEEEECCCCCCHHH--HHHHH-HHHHhCCCEEEEEechhcCcccc--------
Confidence 578899998866532 234678899998776543 54444 44444699999999999554321
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH-HHhcCCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGA-CLNQRPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~-~~~~~p~lf~a~i~~~~~ 669 (783)
.....+++++...+..+++. .+.++..++|+|+||.+++. ++..+|++...++...+.
T Consensus 63 ~~~~~~~~~~~~~~~~~l~~--l~~~~~~lvg~s~gG~~~~~~~a~~~p~~v~~~~l~~~~ 121 (273)
T d1a8sa_ 63 PWSGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp CSSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccccccccchHHHHHHHHHh--cCccceeeeeeccCCccchhhhhhhhhhccceeEEEecc
Confidence 11223556666665555554 34457899999998865554 556679988888776553
|
| >d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Arylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.46 E-value=1.9e-13 Score=137.68 Aligned_cols=120 Identities=18% Similarity=0.145 Sum_probs=82.3
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
+|.+.||++|.+... |..|+||++||.++.... |... ...|.++||.|+++|+||.|... .
T Consensus 2 ~f~~~dG~~l~y~~~--------G~g~~vv~lHG~~~~~~~--~~~~-~~~l~~~g~~vi~~D~~G~G~S~--------~ 62 (271)
T d1va4a_ 2 TFVAKDGTQIYFKDW--------GSGKPVLFSHGWLLDADM--WEYQ-MEYLSSRGYRTIAFDRRGFGRSD--------Q 62 (271)
T ss_dssp EEECTTSCEEEEEEE--------SSSSEEEEECCTTCCGGG--GHHH-HHHHHTTTCEEEEECCTTSTTSC--------C
T ss_pred EEEeECCeEEEEEEE--------cCCCeEEEECCCCCCHHH--HHHH-HHHHHhCCCEEEEEecccccccc--------c
Confidence 477889999975432 234678899998765543 4443 34565579999999999955332 1
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHH-HHHhcCCCceeEEEEcCCcc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVG-ACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~-~~~~~~p~lf~a~i~~~~~~ 670 (783)
......++++...+..+.+. .+.+++.++|||+||.+++ .++.++|+++..++...+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~vg~s~gG~~~~~~~a~~~p~~v~~~v~~~~~~ 122 (271)
T d1va4a_ 63 PWTGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVT 122 (271)
T ss_dssp CSSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred cccccccccccccceeeeee--cCCCcceeeccccccccccccccccccceeeEEEeecccc
Confidence 22234566666666666554 3456899999999887665 45677899999988876643
|
| >d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: YdeN-like domain: Hypothetical protein YdeN species: Bacillus subtilis [TaxId: 1423]
Probab=99.46 E-value=3e-13 Score=129.43 Aligned_cols=162 Identities=14% Similarity=0.005 Sum_probs=104.1
Q ss_pred EEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy2521 557 VIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKY 636 (783)
Q Consensus 557 ~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~r 636 (783)
.||++||..+.... .|...+...|+++||.|+++|++|.+.. ..+|.+..++.+.+ ....+
T Consensus 3 ~V~~vHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~p~~~~~---------------~~~~~~~~l~~~~~---~~~~~ 63 (186)
T d1uxoa_ 3 QVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQP---------------RLEDWLDTLSLYQH---TLHEN 63 (186)
T ss_dssp EEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTSC---------------CHHHHHHHHHTTGG---GCCTT
T ss_pred EEEEECCCCCCcch-hHHHHHHHHHHhCCCEEEEeccCCCCcc---------------hHHHHHHHHHHHHh---ccCCC
Confidence 58889997554332 2333455667778999999999985431 24555555554443 34578
Q ss_pred EEEEEeChhHHHHHHHHhcCCCce--eEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCC
Q psy2521 637 ITIMGGSNGGLLVGACLNQRPELY--GAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPN 714 (783)
Q Consensus 637 i~i~G~S~GG~l~~~~~~~~p~lf--~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~ 714 (783)
+.|+|||+||++++.++.++|+.. .++++.+|+........ .....+..+....... .
T Consensus 64 ~~lvGhS~Gg~~a~~~a~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---------~------ 123 (186)
T d1uxoa_ 64 TYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ-----MLDEFTQGSFDHQKII---------E------ 123 (186)
T ss_dssp EEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG-----GGGGGTCSCCCHHHHH---------H------
T ss_pred cEEEEechhhHHHHHHHHhCCccceeeEEeecccccccchhhh-----hhhhhhcccccccccc---------c------
Confidence 999999999999999999998743 34444444433221110 0001111222211110 1
Q ss_pred CCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCC
Q psy2521 715 NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQG 771 (783)
Q Consensus 715 ~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~ 771 (783)
...| +|++||++|++||+.++.++++.+. .++++++++||...
T Consensus 124 -~~~p-~lvi~g~~D~~vp~~~~~~l~~~~~------------~~~~~~~~~gH~~~ 166 (186)
T d1uxoa_ 124 -SAKH-RAVIASKDDQIVPFSFSKDLAQQID------------AALYEVQHGGHFLE 166 (186)
T ss_dssp -HEEE-EEEEEETTCSSSCHHHHHHHHHHTT------------CEEEEETTCTTSCG
T ss_pred -CCCC-EEEEecCCCCCCCHHHHHHHHHHcC------------CEEEEeCCCCCcCc
Confidence 2333 9999999999999999999887763 25888999999654
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.44 E-value=4.2e-11 Score=121.39 Aligned_cols=246 Identities=10% Similarity=0.050 Sum_probs=146.5
Q ss_pred EEe--CCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCc-eEEEEEE
Q psy2521 164 QRQ--ENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSD-WNTLHIK 240 (783)
Q Consensus 164 ~~~--G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d-~~~i~v~ 240 (783)
+|+ |+++.|++.. .||+.+..+++.+.|.+.. .....++|||||++|||....++.+ ..+||++
T Consensus 7 sPdi~G~~v~f~~~~------dl~~~d~~~g~~~~Lt~~~-------~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~ 73 (281)
T d1k32a2 7 NPDIHGDRIIFVCCD------DLWEHDLKSGSTRKIVSNL-------GVINNARFFPDGRKIAIRVMRGSSLNTADLYFY 73 (281)
T ss_dssp EEEEETTEEEEEETT------EEEEEETTTCCEEEEECSS-------SEEEEEEECTTSSEEEEEEEESTTCCEEEEEEE
T ss_pred CCCCCCCEEEEEeCC------cEEEEECCCCCEEEEecCC-------CcccCEEECCCCCEEEEEEeeCCCCCceEEEEE
Confidence 455 9999998632 4999988777877776532 2357799999999999998776654 3579999
Q ss_pred ECCCCcccccccccc-------ccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecC
Q psy2521 241 DVDTGKDYPEVLKNV-------KFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFP 313 (783)
Q Consensus 241 Dl~tg~~~~~~~~~~-------~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~ 313 (783)
++.+|+..+++.... ....+.|+|||+.|+|+..... ......++..+..+.. ... ..
T Consensus 74 ~~~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----------~~~~~~~~~~~~~~~~----~~~-~~ 138 (281)
T d1k32a2 74 NGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQP----------FSSMTCLYRVENDGIN----FVP-LN 138 (281)
T ss_dssp ETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSS----------STTCCEEEEEEGGGTE----EEE-CC
T ss_pred EecCCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCC----------CccceeeeeecCCCce----eEE-ec
Confidence 999998766543221 1246789999999999874321 1223345555554321 111 11
Q ss_pred CCCeeEEEEEEecCCcEEEEEEecCCCC--------cEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEE
Q psy2521 314 NGRSLGLHSEVTDCGRYLLVSTSNNTQG--------SDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELI 385 (783)
Q Consensus 314 ~~~~~~~~~~~SpDGk~l~~~~~~~~~~--------~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~ 385 (783)
... ....+++||+.+++........ ....+.....+ ............. .....++.++
T Consensus 139 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~ 205 (281)
T d1k32a2 139 LGP---ATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSG---------AFKKIVDMSTHVS-SPVIVGHRIY 205 (281)
T ss_dssp SCS---CSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETT---------EEEEEECCSSCCE-EEEEETTEEE
T ss_pred CCc---cceeeecCCCeEEEeeccccceeeeeccCCcceeeeecccc---------ceeeccCCccccc-eeeeeccccc
Confidence 111 2345677887777665432210 11111111110 0111222222222 2334466788
Q ss_pred EEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC
Q psy2521 386 VKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL 461 (783)
Q Consensus 386 ~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~ 461 (783)
+..+..+ ..+||.+|+++.. .+.|+..... .... ++++|+.|++.. + .+|+++|+++|+. +.|+.
T Consensus 206 ~~~~~~~-~~~l~~~d~~g~~---~~~lt~~~~~-~~~~-~SpDG~~I~f~~--~--~~l~~~d~~~g~~-~~i~~ 270 (281)
T d1k32a2 206 FITDIDG-FGQIYSTDLDGKD---LRKHTSFTDY-YPRH-LNTDGRRILFSK--G--GSIYIFNPDTEKI-EKIEI 270 (281)
T ss_dssp EEECTTS-SCEEEEEETTSCS---CEECCCCCSS-CEEE-EEESSSCEEEEE--T--TEEEEECTTTCCE-EECCC
T ss_pred eeccccc-ccceEEEeCCCCc---eEEeecCCCc-cccc-CcCCCCEEEEEe--C--CEEEEEECCCCCE-EEecc
Confidence 7776644 5679999998876 4555554422 2323 456778888754 2 3699999976664 66654
|
| >d2rhwa1 c.69.1.10 (A:4-286) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Burkholderia xenovorans [TaxId: 36873]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carbon-carbon bond hydrolase domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) species: Burkholderia xenovorans [TaxId: 36873]
Probab=99.43 E-value=2.9e-13 Score=138.15 Aligned_cols=194 Identities=12% Similarity=0.036 Sum_probs=112.2
Q ss_pred CccEEEEecCCCCCccCCc-CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPT-FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
..|+||++||.......+. +...+..++. .||.|+++|.||.|.... .........+..+.+..++++ .
T Consensus 29 ~G~~ivllHG~~~~~~~~~~~~~~l~~~~~-~g~~v~~~D~~G~G~S~~-------~~~~~~~~~~~~~~i~~li~~--l 98 (283)
T d2rhwa1 29 NGETVIMLHGGGPGAGGWSNYYRNVGPFVD-AGYRVILKDSPGFNKSDA-------VVMDEQRGLVNARAVKGLMDA--L 98 (283)
T ss_dssp CSSEEEEECCCSTTCCHHHHHTTTHHHHHH-TTCEEEEECCTTSTTSCC-------CCCSSCHHHHHHHHHHHHHHH--H
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHHHH-CCCEEEEEeCCCCccccc-------ccccccccchhhhhccccccc--c
Confidence 3478999999766544321 2222345555 599999999999553321 111122233333444444443 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcchhhhccc---c-----------ccc-ccc---hhhhC-CC--
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGALDMLRFNK---F-----------TIA-YYS---ESEFG-SP-- 691 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~d~~~~~~---~-----------~~~-~~~---~~~~g-~p-- 691 (783)
+.+++.++|||+||.+++.++.++|+.++++|+..|..-...... . ... ..+ ...+. .+
T Consensus 99 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (283)
T d2rhwa1 99 DIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSL 178 (283)
T ss_dssp TCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGG
T ss_pred cccccccccccchHHHHHHHHHHhhhhcceEEEeCCCcCCcchhhhhhHHHHHHHHHHhhhhhhhhHHHHHHHhhccccc
Confidence 335899999999999999999999999999998876321110000 0 000 000 00111 10
Q ss_pred CCHHH----HHHHH-------------------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhh
Q psy2521 692 NNKTH----FHNLL-------------------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKI 748 (783)
Q Consensus 692 ~~~~~----~~~~~-------------------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 748 (783)
...+. +..+. .++....++. +++| +|+++|..|..+++.++.++++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----i~~P-~lii~G~~D~~~~~~~~~~~~~~~~--- 250 (283)
T d2rhwa1 179 ITEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGE----IKAK-TFITWGRDDRFVPLDHGLKLLWNID--- 250 (283)
T ss_dssp CCHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGG----CCSC-EEEEEETTCSSSCTHHHHHHHHHSS---
T ss_pred CcHHHHHHHHHHhhhhhhhhhhhhhhhhhhhccccchHHHHhh----CCCC-EEEEEeCCCCCcCHHHHHHHHHhCC---
Confidence 11111 00000 0011112222 5677 9999999999999999888877653
Q ss_pred CCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 749 GSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 749 ~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
..++.+++++||.....
T Consensus 251 --------~~~~~~i~~~gH~~~~e 267 (283)
T d2rhwa1 251 --------DARLHVFSKCGHWAQWE 267 (283)
T ss_dssp --------SEEEEEESSCCSCHHHH
T ss_pred --------CCEEEEECCCCCchHHh
Confidence 24788999999976433
|
| >d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.43 E-value=3.9e-13 Score=139.45 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=86.1
Q ss_pred CCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCC
Q psy2521 533 SKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKK 612 (783)
Q Consensus 533 s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~ 612 (783)
+.||.++++.-.-++ ...|+||++||.++.+.. |......+.. +||.|+++|.||.|... .. ....
T Consensus 30 ~~~g~~~~y~~~G~~-----~~~p~llllHG~~~~~~~--~~~~~~~l~~-~~~~vi~~Dl~G~G~S~---~~---~~~~ 95 (310)
T d1b6ga_ 30 GYPGLRAHYLDEGNS-----DAEDVFLCLHGEPTWSYL--YRKMIPVFAE-SGARVIAPDFFGFGKSD---KP---VDEE 95 (310)
T ss_dssp TCTTCEEEEEEEECT-----TCSCEEEECCCTTCCGGG--GTTTHHHHHH-TTCEEEEECCTTSTTSC---EE---SCGG
T ss_pred CCCCEEEEEEEecCC-----CCCCEEEEECCCCCchHH--HHHHHHHhhc-cCceEEEeeecCccccc---cc---cccc
Confidence 458999876543322 346899999998776654 3333434444 69999999999944332 11 1122
Q ss_pred cChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 613 QNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 613 ~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
...++++.+.+..+++. .+.+++.++|||+||.++..++.++|++++++|+..+.
T Consensus 96 ~~~~~~~~~~l~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~P~~V~~lvl~~~~ 150 (310)
T d1b6ga_ 96 DYTFEFHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAC 150 (310)
T ss_dssp GCCHHHHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred cccccccccchhhhhhh--ccccccccccceecccccccchhhhccccceEEEEcCc
Confidence 34577777777777765 23358999999999999999999999999999987653
|
| >d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Mammalian epoxide hydrolase, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=5.1e-13 Score=138.80 Aligned_cols=121 Identities=17% Similarity=0.093 Sum_probs=86.4
Q ss_pred EEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc
Q psy2521 529 VYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR 608 (783)
Q Consensus 529 ~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~ 608 (783)
.+++..||.+|++... |..|+||++||.++.+.. |.... ..|.++||.|+++|.||.|. +...
T Consensus 14 ~~v~~~~g~~i~y~~~--------G~gp~vlllHG~~~~~~~--~~~~~-~~L~~~g~~vi~~D~~G~G~---S~~~--- 76 (322)
T d1zd3a2 14 GYVTVKPRVRLHFVEL--------GSGPAVCLCHGFPESWYS--WRYQI-PALAQAGYRVLAMDMKGYGE---SSAP--- 76 (322)
T ss_dssp EEEEEETTEEEEEEEE--------CCSSEEEEECCTTCCGGG--GTTHH-HHHHHTTCEEEEEECTTSTT---SCCC---
T ss_pred eEEEECCCCEEEEEEE--------cCCCeEEEECCCCCCHHH--HHHHH-HHHHHCCCEEEEeccccccc---cccc---
Confidence 3456678988876542 234899999998776554 44433 44555699999999999443 2111
Q ss_pred ccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 609 LLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 609 ~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.......++++...+..|+++ .+.+++.++|||+||.++..++.++|+++.++|...+
T Consensus 77 ~~~~~~~~~~~~~~i~~l~~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 134 (322)
T d1zd3a2 77 PEIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNT 134 (322)
T ss_dssp SCGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESC
T ss_pred cccccccccccchhhhhhhhc--ccccccccccccchHHHHHHHHHhCCccccceEEEcc
Confidence 111223567777777777665 3456899999999999999999999999999887653
|
| >d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium radiobacter [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Agrobacterium radiobacter [TaxId: 358]
Probab=99.41 E-value=2.1e-12 Score=131.80 Aligned_cols=121 Identities=11% Similarity=0.037 Sum_probs=82.6
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccc
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRL 609 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~ 609 (783)
++.. +|.+|++... |..|+||++||.++.+.. |.. ....|++ ||.|+++|+||.|... .... .
T Consensus 12 ~~~~-~~~~l~y~~~--------G~gp~vv~lHG~~~~~~~--~~~-~~~~l~~-~~~vi~~D~~G~G~s~---~~~~-~ 74 (293)
T d1ehya_ 12 EVQL-PDVKIHYVRE--------GAGPTLLLLHGWPGFWWE--WSK-VIGPLAE-HYDVIVPDLRGFGDSE---KPDL-N 74 (293)
T ss_dssp EEEC-SSCEEEEEEE--------ECSSEEEEECCSSCCGGG--GHH-HHHHHHT-TSEEEEECCTTSTTSC---CCCT-T
T ss_pred EEEE-CCEEEEEEEE--------CCCCeEEEECCCCCCHHH--HHH-HHHHHhc-CCEEEEecCCcccCCc---cccc-c
Confidence 4443 6778865432 235889999998765543 443 3456665 9999999999954322 1110 1
Q ss_pred cCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 610 LKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 610 ~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
......++++...+..+++. ...+++.|+|||+||.+++.++.++|+++.++|...|.
T Consensus 75 ~~~~~~~~~~a~~~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 132 (293)
T d1ehya_ 75 DLSKYSLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPI 132 (293)
T ss_dssp CGGGGCHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCS
T ss_pred ccccccchhhhhHHHhhhhh--cCccccccccccccccchhcccccCccccceeeeeecc
Confidence 11223456666666666554 33468999999999999999999999999999988774
|
| >d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Carboxylesterase/thioesterase 1 domain: Carboxylesterase species: Pseudomonas fluorescens [TaxId: 294]
Probab=99.40 E-value=1.7e-12 Score=127.80 Aligned_cols=183 Identities=15% Similarity=0.157 Sum_probs=113.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcC--CEEEEEecCC------CCCCCChhHHhhcccc-CCcChHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIR------GGGELGEDWHNAGRLL-KKQNCFDDFQAAA 623 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~R------G~g~~G~~~~~~g~~~-~~~~~~~D~~a~~ 623 (783)
.+.|+||++||..+... .|... ...+.+. ++.+++++-. +++..+..|+...... ......+++.+..
T Consensus 12 ~~~~~Vi~lHG~G~~~~--~~~~~-~~~l~~~~~~~~~i~p~ap~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 88 (218)
T d1auoa_ 12 PADACVIWLHGLGADRY--DFMPV-AEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSA 88 (218)
T ss_dssp CCSEEEEEECCTTCCTT--TTHHH-HHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEECHHHHHHHH
T ss_pred CCCeEEEEEcCCCCChh--hHHHH-HHHHHHhCCCcEEEccCCCccccccCCCcccCcccccccccccccchHHHHHHHH
Confidence 35689999999533332 34332 2334332 4666665421 1222234565432221 1222333343332
Q ss_pred ---HHHHH---cCCCCCCcEEEEEeChhHHHHHHHH-hcCCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHH
Q psy2521 624 ---EYMIN---KKYTKPKYITIMGGSNGGLLVGACL-NQRPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTH 696 (783)
Q Consensus 624 ---~~l~~---~~~~d~~ri~i~G~S~GG~l~~~~~-~~~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~ 696 (783)
..+++ +..+|++|++++|+|+||.+++.++ .+.+..|+++++..|....... .......
T Consensus 89 ~~v~~li~~~~~~~i~~~ri~l~GfSqGg~~a~~~~l~~~~~~~~~~v~~~g~~~~~~~--------------~~~~~~~ 154 (218)
T d1auoa_ 89 KMVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGD--------------ELELSAS 154 (218)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTCCT--------------TCCCCHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEeeeCcchHHHHHHHHhcccccceeeeeccccCccccc--------------ccccchh
Confidence 22322 2347999999999999999998775 5557789999998875422110 0000000
Q ss_pred HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCccchh
Q psy2521 697 FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKALDI 776 (783)
Q Consensus 697 ~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~~~~ 776 (783)
+ .+.| +|++||+.|..||+.++.++++.|++. |.+++++.|+ .||.+....-.
T Consensus 155 -----------~-------~~~p-vl~~hG~~D~vvp~~~~~~~~~~L~~~-------g~~~~~~~~~-~gH~i~~~~~~ 207 (218)
T d1auoa_ 155 -----------Q-------QRIP-ALCLHGQYDDVVQNAMGRSAFEHLKSR-------GVTVTWQEYP-MGHEVLPQEIH 207 (218)
T ss_dssp -----------H-------HTCC-EEEEEETTCSSSCHHHHHHHHHHHHTT-------TCCEEEEEES-CSSSCCHHHHH
T ss_pred -----------c-------cCCC-EEEEecCCCCccCHHHHHHHHHHHHHC-------CCCEEEEEEC-CCCccCHHHHH
Confidence 0 1334 999999999999999999999999998 8899999997 68988655444
Q ss_pred hhh
Q psy2521 777 ELK 779 (783)
Q Consensus 777 ~~~ 779 (783)
.+.
T Consensus 208 ~i~ 210 (218)
T d1auoa_ 208 DIG 210 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp. [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Rhodococcus sp. [TaxId: 1831]
Probab=99.39 E-value=1.1e-12 Score=134.07 Aligned_cols=115 Identities=14% Similarity=0.058 Sum_probs=82.5
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.+|.+...-++ ..|+||++||.++.... |... ...|+ .||.|+++|+||.|... .....
T Consensus 14 ~~g~~i~y~~~G~~------~~p~lvllHG~~~~~~~--~~~~-~~~L~-~~~~vi~~d~~G~G~S~--------~~~~~ 75 (291)
T d1bn7a_ 14 VLGERMHYVDVGPR------DGTPVLFLHGNPTSSYL--WRNI-IPHVA-PSHRCIAPDLIGMGKSD--------KPDLD 75 (291)
T ss_dssp ETTEEEEEEEESCS------SSSCEEEECCTTCCGGG--GTTT-HHHHT-TTSCEEEECCTTSTTSC--------CCSCC
T ss_pred ECCEEEEEEEeCCC------CCCeEEEECCCCCCHHH--HHHH-HHHHh-cCCEEEEEeCCCCcccc--------ccccc
Confidence 48988887654322 34679999998776644 4433 34566 49999999999954332 11223
Q ss_pred ChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 614 NCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 614 ~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
..++++...+..++++ .+-+++.++|||+||.++..++.++|+.+++++...+
T Consensus 76 ~~~~~~~~~l~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~~~~li~~~~ 128 (291)
T d1bn7a_ 76 YFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 128 (291)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred cchhHHHHHHhhhhhh--hccccccccccccccchhHHHHHhCCcceeeeeeecc
Confidence 4567777777766665 3446899999999999999999999999999887543
|
| >d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Salicylic acid-binding protein 2 (SABP2) species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=99.38 E-value=2e-12 Score=128.24 Aligned_cols=103 Identities=13% Similarity=0.138 Sum_probs=72.5
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPK 635 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 635 (783)
|.||++||.++.+.. |... ...|+++||.|+++|+||.|... .. ......+.+....+..++..... ..
T Consensus 3 ~~vvllHG~~~~~~~--w~~~-~~~L~~~g~~vi~~Dl~G~G~S~---~~----~~~~~~~~~~~~~~~~~~~~~~~-~~ 71 (258)
T d1xkla_ 3 KHFVLVHGACHGGWS--WYKL-KPLLEAAGHKVTALDLAASGTDL---RK----IEELRTLYDYTLPLMELMESLSA-DE 71 (258)
T ss_dssp CEEEEECCTTCCGGG--GTTH-HHHHHHTTCEEEECCCTTSTTCC---CC----GGGCCSHHHHHHHHHHHHHTSCS-SS
T ss_pred CcEEEECCCCCCHHH--HHHH-HHHHHhCCCEEEEecCCCCCCCC---CC----CCCCcchHHHHHHHhhhhhcccc-cc
Confidence 578889998776644 4443 35566679999999999955432 11 11223455655555555544322 35
Q ss_pred cEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 636 YITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 636 ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
++.++|||+||.+++.++.++|+.+..+|...+.
T Consensus 72 ~~~lvghS~Gg~va~~~a~~~p~~~~~lil~~~~ 105 (258)
T d1xkla_ 72 KVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAF 105 (258)
T ss_dssp CEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred cccccccchhHHHHHHHhhhhccccceEEEeccc
Confidence 7899999999999999999999999999887764
|
| >d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces aureofaciens [TaxId: 1894]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Bromoperoxidase A2 species: Streptomyces aureofaciens [TaxId: 1894]
Probab=99.38 E-value=2.8e-12 Score=129.62 Aligned_cols=104 Identities=12% Similarity=0.022 Sum_probs=69.8
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
|..|+||++||.++.... |......++ ++||.|+++|+||.|... .......++++.+.+..+++. .
T Consensus 21 G~G~~ivllHG~~~~~~~--~~~~~~~l~-~~g~~vi~~D~~G~G~S~--------~~~~~~~~~~~~~dl~~~l~~--l 87 (277)
T d1brta_ 21 GTGQPVVLIHGFPLSGHS--WERQSAALL-DAGYRVITYDRRGFGQSS--------QPTTGYDYDTFAADLNTVLET--L 87 (277)
T ss_dssp CSSSEEEEECCTTCCGGG--GHHHHHHHH-HTTCEEEEECCTTSTTSC--------CCSSCCSHHHHHHHHHHHHHH--H
T ss_pred ccCCeEEEECCCCCCHHH--HHHHHHHHH-hCCCEEEEEeCCCCCccc--------ccccccchhhhhhhhhhhhhc--c
Confidence 345789999998776543 444443444 469999999999954332 111223466666555555544 2
Q ss_pred CCCcEEEEEeChhH-HHHHHHHhcCCCceeEEEEcCCc
Q psy2521 633 KPKYITIMGGSNGG-LLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 633 d~~ri~i~G~S~GG-~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
..+++.++|||+|| .++..++..+|+.++++|...++
T Consensus 88 ~~~~~~lvGhS~G~~~~~~~~a~~~p~~v~~lvl~~~~ 125 (277)
T d1brta_ 88 DLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASL 125 (277)
T ss_dssp TCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CcccccccccccchhhhhHHHHHhhhcccceEEEecCC
Confidence 33589999999996 55555677789999999887654
|
| >d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Proline iminopeptidase-like domain: Proline aminopeptidase species: Serratia marcescens [TaxId: 615]
Probab=99.35 E-value=1e-11 Score=127.03 Aligned_cols=126 Identities=17% Similarity=0.134 Sum_probs=87.9
Q ss_pred EEEEEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhh
Q psy2521 527 KQVYFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNA 606 (783)
Q Consensus 527 ~~~~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 606 (783)
+.-++++.||.+|.+...-++ ..|.||++||+++.+..+.. . ...++ .||.|+++|.||.|... ..
T Consensus 12 ~~~~v~~~dG~~i~y~~~G~~------~g~pvvllHG~~~~~~~w~~--~-~~~l~-~~~~vi~~D~rG~G~S~---~~- 77 (313)
T d1wm1a_ 12 DSGWLDTGDGHRIYWELSGNP------NGKPAVFIHGGPGGGISPHH--R-QLFDP-ERYKVLLFDQRGCGRSR---PH- 77 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECT------TSEEEEEECCTTTCCCCGGG--G-GGSCT-TTEEEEEECCTTSTTCB---ST-
T ss_pred cCCEEEeCCCcEEEEEEecCC------CCCeEEEECCCCCcccchHH--H-HHHhh-cCCEEEEEeCCCccccc---cc-
Confidence 345577889999987765432 24678889999887765432 2 24455 59999999999954321 11
Q ss_pred ccccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 607 GRLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 607 g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
.......+.++.+.+..++.+ ....++.++|+|+||.++..++..+|+.+..++...+..
T Consensus 78 --~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~vg~s~g~~~~~~~a~~~~~~v~~~v~~~~~~ 137 (313)
T d1wm1a_ 78 --ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFT 137 (313)
T ss_dssp --TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred --ccccccchhhHHHHHHhhhhc--cCCCcceeEeeecCCchhhHHHHHHhhhheeeeeccccc
Confidence 222234455666655555554 345689999999999999999999999998888776543
|
| >d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId: 51671]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloperoxidase domain: Gamma-lactamase species: Aureobacterium sp. [TaxId: 51671]
Probab=99.35 E-value=2.3e-12 Score=130.67 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=71.0
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
|..|.||++||.++.+.. |......++. +||.|+++|.||.|... .......++++...+..+++. .
T Consensus 21 G~g~~illlHG~~~~~~~--~~~~~~~l~~-~~~~vi~~D~~G~G~S~--------~~~~~~~~~~~~~di~~~i~~--l 87 (279)
T d1hkha_ 21 GSGQPVVLIHGYPLDGHS--WERQTRELLA-QGYRVITYDRRGFGGSS--------KVNTGYDYDTFAADLHTVLET--L 87 (279)
T ss_dssp SSSEEEEEECCTTCCGGG--GHHHHHHHHH-TTEEEEEECCTTSTTSC--------CCSSCCSHHHHHHHHHHHHHH--H
T ss_pred ccCCeEEEECCCCCCHHH--HHHHHHHHHH-CCCEEEEEechhhCCcc--------ccccccchhhhhhhhhhhhhh--c
Confidence 345789999998776543 5544445555 69999999999955432 112234566666665555554 2
Q ss_pred CCCcEEEEEeChhH-HHHHHHHhcCCCceeEEEEcCCc
Q psy2521 633 KPKYITIMGGSNGG-LLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 633 d~~ri~i~G~S~GG-~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
+.+++.++|||+|| .++..++..+|+++.++++..+.
T Consensus 88 ~~~~~~lvGhS~Gg~~~a~~~a~~~p~~v~~lvli~~~ 125 (279)
T d1hkha_ 88 DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASL 125 (279)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred CcCccccccccccccchhhhhccccccccceeEEeecc
Confidence 34589999999996 55556677789999998887653
|
| >d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree (Hevea brasiliensis) [TaxId: 3981]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hydroxynitrile lyase-like domain: Hydroxynitrile lyase species: Rubber tree (Hevea brasiliensis) [TaxId: 3981]
Probab=99.33 E-value=2.3e-12 Score=128.06 Aligned_cols=101 Identities=12% Similarity=0.133 Sum_probs=71.5
Q ss_pred EEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCCCcE
Q psy2521 558 IIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKPKYI 637 (783)
Q Consensus 558 ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri 637 (783)
.|++||..+.+.. |... ...|.++||.|+++|+||.|... .. ......++++.+.+..++.+. ...+++
T Consensus 5 ~vliHG~~~~~~~--w~~~-~~~L~~~g~~Via~Dl~G~G~S~---~~----~~~~~~~~~~~~~l~~~~~~~-~~~~~~ 73 (256)
T d3c70a1 5 FVLIHTICHGAWI--WHKL-KPLLEALGHKVTALDLAASGVDP---RQ----IEEIGSFDEYSEPLLTFLEAL-PPGEKV 73 (256)
T ss_dssp EEEECCTTCCGGG--GTTH-HHHHHHTTCEEEEECCTTSTTCS---CC----GGGCCSHHHHTHHHHHHHHHS-CTTCCE
T ss_pred EEEeCCCCCCHHH--HHHH-HHHHHhCCCEEEEEcCCCCCCCC---CC----CCCCCCHHHHHHHhhhhhhhh-ccccce
Confidence 4778998766543 4443 45566679999999999955432 11 112335667777666554432 234689
Q ss_pred EEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 638 TIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 638 ~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
.++|||+||.+++.++.++|++++++|...+.
T Consensus 74 ~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 105 (256)
T d3c70a1 74 ILVGESCGGLNIAIAADKYCEKIAAAVFHNSV 105 (256)
T ss_dssp EEEEETTHHHHHHHHHHHHGGGEEEEEEESCC
T ss_pred eecccchHHHHHHHHhhcCchhhhhhheeccc
Confidence 99999999999999999999999999887654
|
| >d1pv1a_ c.69.1.34 (A:) Hypothetical esterase YJL068C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical esterase YJL068C domain: Hypothetical esterase YJL068C species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.31 E-value=5.2e-12 Score=129.75 Aligned_cols=231 Identities=12% Similarity=0.068 Sum_probs=138.8
Q ss_pred eEEEEEEECC-CCcEEEEEEEEecCcC-----CCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCC--
Q psy2521 525 QTKQVYFRSK-DGTRVPMYIIHRVGAL-----RNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGG-- 596 (783)
Q Consensus 525 ~~~~~~~~s~-dg~~v~~~~~~p~~~~-----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-- 596 (783)
...++++.|. -|..+++.++.|++.. .++++|+|++.||..+....+.-......++.+.|.+++.++.-..
T Consensus 13 ~~~~~s~~S~~l~~~~~~~VyLP~~y~~~~~~~~~~yPVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~vv~~~~~p~~~ 92 (299)
T d1pv1a_ 13 RLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGD 92 (299)
T ss_dssp EEEEEEEECSSSSSEEEEEEEECTTTTSCCCSSCTTBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEECCSSCCST
T ss_pred EEEEEEEECcccCCceEEEEEeCCcccccCcccCCCCCEEEEcCCCCCCHHHHHHhhhHHHHHHHcCCceecCCCccccc
Confidence 5778888885 5789999999999762 3567999999999766543221111234566667999998874210
Q ss_pred ---C--------CCChhHHhhccc--cCCcChHHHHHH--HHHHHHHcC-------CCCCCcEEEEEeChhHHHHHHHHh
Q psy2521 597 ---G--------ELGEDWHNAGRL--LKKQNCFDDFQA--AAEYMINKK-------YTKPKYITIMGGSNGGLLVGACLN 654 (783)
Q Consensus 597 ---g--------~~G~~~~~~g~~--~~~~~~~~D~~a--~~~~l~~~~-------~~d~~ri~i~G~S~GG~l~~~~~~ 654 (783)
+ +.+..|+..... ..+...+.|++. .+.++.+.- ..++++.+|.|+||||+.++.++.
T Consensus 93 ~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~i~~EL~p~i~~~~~~~~~r~~~~~~~~~I~G~SmGG~gAl~~al 172 (299)
T d1pv1a_ 93 EVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYL 172 (299)
T ss_dssp TSCCCTTCCSSSSSSCCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEETHHHHHHHHHHH
T ss_pred ccCCcccccccccCCCccccccccCCcccccchHHHHHHHHHHHHHHhCCcccccccccccceEEEeecccHHHHHHHHH
Confidence 0 011222221100 011223455442 333443321 234468999999999999988875
Q ss_pred c--CCCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCC
Q psy2521 655 Q--RPELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRV 732 (783)
Q Consensus 655 ~--~p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V 732 (783)
+ +|++|+++++.+|+.+....... .......+|.... ....++|+..++..+ ....|++++.+|..|...
T Consensus 173 ~~~~p~~f~~~~s~s~~~~~~~~~~~--~~~~~~~~g~~~~-----~~~~~~~~~l~~~~~-~~~~~~i~~~~G~~D~~~ 244 (299)
T d1pv1a_ 173 KGYSGKRYKSCSAFAPIVNPSNVPWG--QKAFKGYLGEEKA-----QWEAYDPCLLIKNIR-HVGDDRILIHVGDSDPFL 244 (299)
T ss_dssp HTGGGTCCSEEEEESCCCCSTTSHHH--HHHHHHHSCC---------CGGGCHHHHGGGSC-CCTTCCEEEECCTTCTTT
T ss_pred HhcCCCceEEEeeccCcCCcccccch--hhhhhhhcccchh-----hhhhcCHHHHHHHhh-ccCCcceeEecCCCCcch
Confidence 4 59999999999998875432110 0011122333211 123444443332210 135567999999999877
Q ss_pred CcH-HHHHHHHHHHhhhCCCCCCC--CcEEEEEeCCCCccC
Q psy2521 733 PPL-HSYKFIATLQEKIGSLPYQK--NPLLLRVEQDAGHGQ 770 (783)
Q Consensus 733 ~~~-~~~~~~~~L~~~~~~~~~~~--~~~~l~~~~~~gHg~ 770 (783)
... ....|.+.+++. + .+++++..++.||..
T Consensus 245 ~~~~~~~~f~~~~~~~-------g~~~~~~~~~~~G~~Hsw 278 (299)
T d1pv1a_ 245 EEHLKPELLLEAVKAT-------SWQDYVEIKKVHGFDHSY 278 (299)
T ss_dssp TTTCCTHHHHHHHTTS-------TTTTSEEEECCTTCCSSH
T ss_pred hhhhcHHHHHHHHHhc-------CCCcceEEEecCCCCcCH
Confidence 654 356788888776 4 357888888888974
|
| >d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase {Penicillium funiculosum [TaxId: 28572]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: PHB depolymerase-like domain: Polyhydroxybutyrate depolymerase species: Penicillium funiculosum [TaxId: 28572]
Probab=99.28 E-value=2.2e-12 Score=133.00 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=84.9
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc-CCcchhhhcccccccccchhhh-CCCC--CHHHHHHHHhcCcc
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL-VGALDMLRFNKFTIAYYSESEF-GSPN--NKTHFHNLLSYSPL 706 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~-~~~~d~~~~~~~~~~~~~~~~~-g~p~--~~~~~~~~~~~sp~ 706 (783)
.+||+||+|+|+|+||+|+..++..+|++|+++++. +|......... ......+ +.+. .+.........+.+
T Consensus 7 ~iDp~rI~V~G~SsGG~mA~~la~a~sd~f~aga~vvAg~p~~ca~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (318)
T d2d81a1 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQ----YYTSCMYNGYPSITTPTANMKSWSGNQI 82 (318)
T ss_dssp CEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSS----CGGGGSTTCCCCCHHHHHHHHHHBTTTB
T ss_pred CCCccceEEEEECHHHHHHHHHHHhcccceeeeEEEeccCchhhhccc----chHHHhhcCCCCCcChhHHHHHHhhcCC
Confidence 479999999999999999999999999999754332 22211111100 0000111 1121 12222233333333
Q ss_pred cCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccCCcc
Q psy2521 707 HNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQGKA 773 (783)
Q Consensus 707 ~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~~~~ 773 (783)
..+.. ...||+||+||.+|++|++.++.+++++|++. . .+..+.++.++++||+|..+
T Consensus 83 ~~~~~----~~~~pvll~hG~~D~~Vpp~~s~~l~~~l~~~----~-~~~~v~yv~~~gagH~fpT~ 140 (318)
T d2d81a1 83 ASVAN----LGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNF----D-NSANVSYVTTTGAVHTFPTD 140 (318)
T ss_dssp CCGGG----GGGCEEEEEEETTCCSSCHHHHHHHHHHHTTT----S-CGGGEEEEEETTCCSSEEES
T ss_pred cchhc----cCCCCEEEEecCCCCCcCHHHHHHHHHHHHcC----c-CCCceEEEEeCCCCCCCCCC
Confidence 33333 34456999999999999999999999999876 1 14568999999999999654
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.27 E-value=7e-09 Score=105.08 Aligned_cols=239 Identities=11% Similarity=0.089 Sum_probs=148.1
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++++||||++|+.+...+ ..|+++|+++++.+...........+.|++|++.++.....
T Consensus 34 p~~va~spdG~~l~v~~~~~----~~i~v~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 94 (301)
T d1l0qa2 34 PMGAVISPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMA--------------- 94 (301)
T ss_dssp EEEEEECTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT---------------
T ss_pred ceEEEEeCCCCEEEEEECCC----CEEEEEECCCCceeeeeeccccccccccccccccccccccc---------------
Confidence 45689999999997665433 36999999999876533222233578999999988876622
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...+.++++.+.. ......... ......++|||+++++.... ...+.+++..++. ....+...
T Consensus 95 ~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~dg~~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~ 157 (301)
T d1l0qa2 95 SSTLSVIDTTSNT--VAGTVKTGK---SPLGLALSPDGKKLYVTNNG---DKTVSVINTVTKA---------VINTVSVG 157 (301)
T ss_dssp TTEEEEEETTTTE--EEEEEECSS---SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---------EEEEEECC
T ss_pred cceeeecccccce--eeeeccccc---cceEEEeecCCCeeeeeecc---ccceeeeeccccc---------eeeecccC
Confidence 2356666765432 122222222 23567899999999876543 2577888887731 11122222
Q ss_pred ccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 371 DHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 371 ~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
.... ..++++++.+++.... ...+...+..... ....+... ..........+++.+++.........|++||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D 230 (301)
T d1l0qa2 158 RSPKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS---VIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (301)
T ss_dssp SSEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---EEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred CCceEEEeeccccceeeeccc---cccccccccccee---eeeccccc-CCcceeeccccccccccccccceeeeeeeee
Confidence 2212 2588898888875543 2235455544332 22333332 2333334445556777766666567899999
Q ss_pred CCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 450 LNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 450 l~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+.+++.+..++.. ..+.++..+||++.++++.+.- .+|..+|+
T Consensus 231 ~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~---~~i~v~D~ 273 (301)
T d1l0qa2 231 TGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFC---NTVSVIDT 273 (301)
T ss_dssp TTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTT---TEEEEEET
T ss_pred cCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCC---CeEEEEEC
Confidence 9888877777654 2345777889998887764332 47999999
|
| >d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Biotin biosynthesis protein BioH domain: Biotin biosynthesis protein BioH species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=4.6e-12 Score=127.00 Aligned_cols=95 Identities=17% Similarity=0.075 Sum_probs=66.3
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.|+||++||..+.+.. |... ...|+ .||.|+++|+||.|... ......+.|+.+.+. ... .
T Consensus 11 ~~~lvllHG~~~~~~~--~~~~-~~~L~-~~~~vi~~D~~G~G~S~---------~~~~~~~~d~~~~~~---~~~---~ 71 (256)
T d1m33a_ 11 NVHLVLLHGWGLNAEV--WRCI-DEELS-SHFTLHLVDLPGFGRSR---------GFGALSLADMAEAVL---QQA---P 71 (256)
T ss_dssp SSEEEEECCTTCCGGG--GGGT-HHHHH-TTSEEEEECCTTSTTCC---------SCCCCCHHHHHHHHH---TTS---C
T ss_pred CCeEEEECCCCCCHHH--HHHH-HHHHh-CCCEEEEEeCCCCCCcc---------ccccccccccccccc---ccc---c
Confidence 3678889998665543 4433 35566 49999999999954321 122334555544333 322 3
Q ss_pred CcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++.++|||+||.+++.++.++|+.+++++...+
T Consensus 72 ~~~~l~GhS~Gg~ia~~~a~~~p~~~~~l~~~~~ 105 (256)
T d1m33a_ 72 DKAIWLGWSLGGLVASQIALTHPERVRALVTVAS 105 (256)
T ss_dssp SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred cceeeeecccchHHHHHHHHhCCcccceeeeeec
Confidence 5899999999999999999999999998877654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.17 E-value=3.1e-10 Score=118.63 Aligned_cols=182 Identities=12% Similarity=0.067 Sum_probs=118.1
Q ss_pred EEECC-CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 214 YAFSD-NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 214 ~~~SP-DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
..||| ||+++|+... .+|+++|+++|..++.. .......++|||||+.|+++..++ ..
T Consensus 8 ~~fSP~dG~~~a~~~~------g~v~v~d~~~~~~~~~~-~~~~v~~~~~spDg~~l~~~~~~~--------------g~ 66 (360)
T d1k32a3 8 EDFSPLDGDLIAFVSR------GQAFIQDVSGTYVLKVP-EPLRIRYVRRGGDTKVAFIHGTRE--------------GD 66 (360)
T ss_dssp EEEEECGGGCEEEEET------TEEEEECTTSSBEEECS-CCSCEEEEEECSSSEEEEEEEETT--------------EE
T ss_pred ccccCCCCCEEEEEEC------CeEEEEECCCCcEEEcc-CCCCEEEEEECCCCCEEEEEEcCC--------------CC
Confidence 56999 9999999753 36999999999877654 333446899999999999988432 23
Q ss_pred eEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccc
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH 372 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~ 372 (783)
.|+++++.++... .+.. .......+.|||||++|+..... ..++++++.++. ...+......
T Consensus 67 ~v~v~d~~~~~~~--~~~~---~~~~v~~~~~spdg~~l~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~~ 128 (360)
T d1k32a3 67 FLGIYDYRTGKAE--KFEE---NLGNVFAMGVDRNGKFAVVANDR----FEIMTVDLETGK---------PTVIERSREA 128 (360)
T ss_dssp EEEEEETTTCCEE--ECCC---CCCSEEEEEECTTSSEEEEEETT----SEEEEEETTTCC---------EEEEEECSSS
T ss_pred EEEEEECCCCcEE--EeeC---CCceEEeeeecccccccceeccc----cccccccccccc---------eeeeeecccc
Confidence 5888888765321 2211 22234678999999999876433 589999998741 1222222222
Q ss_pred ee--EEEEeeCCEEEEEECCC------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEe
Q psy2521 373 HH--EIIANNGPELIVKTTKN------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 373 ~~--~~~s~dg~~l~~~t~~~------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~ 438 (783)
.. ..|+|||++|++..... .....+..+++.++. ...+..+. .......+.++|+.|++...
T Consensus 129 ~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~---~~~~~~~~-~~~~~~~~spdg~~l~~~s~ 198 (360)
T d1k32a3 129 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAATTEN-SHDYAPAFDADSKNLYYLSY 198 (360)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECSCSS-SBEEEEEECTTSCEEEEEES
T ss_pred cccchhhccceeeeeeeccccccceeeccccceeeeccccCc---eeeecccc-cccccccccCCCCEEEEEeC
Confidence 21 25999999998876432 234467788887654 23333333 44444556666667766554
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.16 E-value=2.1e-09 Score=117.77 Aligned_cols=275 Identities=12% Similarity=0.011 Sum_probs=148.1
Q ss_pred cEEeCCeEEEEEEcCC----CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEE
Q psy2521 163 PQRQENNYFYFHNKGL----QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLH 238 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~----~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~ 238 (783)
.++||.++.|..+... .....+|+.+..+++...+.... -.+..++|||||++|||..+ .+||
T Consensus 69 ~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~-------~~~~~~~~SPDG~~ia~~~~------~~l~ 135 (470)
T d2bgra1 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIP-------NNTQWVTWSPVGHKLAYVWN------NDIY 135 (470)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-------TTEEEEEECSSTTCEEEEET------TEEE
T ss_pred ECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCC-------ccccccccccCcceeeEeec------ccce
Confidence 4579999888765321 22345666665444322221111 12567999999999999754 3699
Q ss_pred EEECCCCccccccccc-------------------cccCeeEEeeCCCEEEEEEeecCCCCC---------CC-Ccc---
Q psy2521 239 IKDVDTGKDYPEVLKN-------------------VKFPSISWTHDHKGFFYNQYCDINGTA---------DG-TET--- 286 (783)
Q Consensus 239 v~Dl~tg~~~~~~~~~-------------------~~~~~~~WspDg~~l~y~~~~~~~~~~---------~g-~~~--- 286 (783)
++++.+|+....+... .....+.|||||+.|+|.+.++..... .. ...
T Consensus 136 ~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~ 215 (470)
T d2bgra1 136 VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVR 215 (470)
T ss_dssp EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEE
T ss_pred EEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCeeee
Confidence 9999999765443211 012457899999999999877542110 00 000
Q ss_pred -------cccCCceEEEEEcCCCCCCceeE--Eec-----CCCCeeEEEEEEecCCcEEEEEEec---------------
Q psy2521 287 -------TAHMGQKIYYHVLGTEQDKDIPV--VEF-----PNGRSLGLHSEVTDCGRYLLVSTSN--------------- 337 (783)
Q Consensus 287 -------~~~~~~~v~~~~lgt~~~~d~~v--~~~-----~~~~~~~~~~~~SpDGk~l~~~~~~--------------- 337 (783)
.......++.+++.+........ ... .....+...+.|+++++.+++...+
T Consensus 216 ~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~ 295 (470)
T d2bgra1 216 VPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDES 295 (470)
T ss_dssp EECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETT
T ss_pred eccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCC
Confidence 00111234444443322111000 000 0011122344455555443333222
Q ss_pred --------------------------------------------CCCCcEEEEEECCCCCCCcccCCCCceeeecCccce
Q psy2521 338 --------------------------------------------NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHH 373 (783)
Q Consensus 338 --------------------------------------------~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~ 373 (783)
......||+++++++. ...+..+....
T Consensus 296 tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~---------~~~lt~g~~~v 366 (470)
T d2bgra1 296 SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD---------CTFITKGTWEV 366 (470)
T ss_dssp TTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSC---------CEESCCSSSCE
T ss_pred CCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccCCc---------eeeeccCCeeE
Confidence 2222445555554421 22233332222
Q ss_pred eEEEEeeCCEEEEEECCC--CC-CceEEEEcCCCCCCCCcEEeecCC---CCceEEEEEEeeCCEEEEEEecCCeeEEEE
Q psy2521 374 HEIIANNGPELIVKTTKN--AP-KGKVVTINLNNPCEKNWKTLIPED---ENRTLDVVAAVANNKLIVHYIQNVRSVMDL 447 (783)
Q Consensus 374 ~~~~s~dg~~l~~~t~~~--~~-~~~L~~~d~~~~~~~~~~~li~~~---~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~ 447 (783)
...++++++.+||.++.. .+ ...||+++++++.. .+.|..+. ...+.....+++|++++..+.....+.+.+
T Consensus 367 ~~~~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~--~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l 444 (470)
T d2bgra1 367 IGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTK--VTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTL 444 (470)
T ss_dssp EEEEEECSSEEEEEESCGGGCTTCBEEEEEETTCTTC--EEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEE
T ss_pred EEEEEECCCEEEEEEecCCCCcceEEEEEEECCCCCc--eeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEE
Confidence 235778899999988753 22 34699999987541 23332221 123344445677788888888777777888
Q ss_pred EECCCCceeeeecC
Q psy2521 448 HDLNTGKRLHSFPL 461 (783)
Q Consensus 448 ~dl~~G~~~~~l~~ 461 (783)
++..+|+.++.|+.
T Consensus 445 ~~~~~g~~v~~le~ 458 (470)
T d2bgra1 445 HSSVNDKGLRVLED 458 (470)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEec
Confidence 88888988777653
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.16 E-value=5.4e-08 Score=102.21 Aligned_cols=297 Identities=11% Similarity=0.023 Sum_probs=151.7
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-----CCc
Q psy2521 159 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-----GSD 233 (783)
Q Consensus 159 ~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-----G~d 233 (783)
...+|+++|.++|............+|+.+...++..--++.. . ...+.|||||++|++..... +..
T Consensus 24 ~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~------~--~~~~a~SpDG~~l~va~~~~~~~~~~~~ 95 (373)
T d2madh_ 24 NDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG------F--LPNPVAAHSGSEFALASTSFSRIAKGKR 95 (373)
T ss_pred cccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCC------C--CccEEEcCCCCEEEEEeecCCccccccc
Confidence 3456889999988764433334467888776554433223211 1 12589999999999986543 233
Q ss_pred eEEEEEEECCCCcccccccc--------ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC
Q psy2521 234 WNTLHIKDVDTGKDYPEVLK--------NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK 305 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~~~--------~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~ 305 (783)
...|+++|+.+++.+..... ......+.|+||++.+++..... ...+..++..+..
T Consensus 96 ~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--------------~~~~~~~~~~~~~-- 159 (373)
T d2madh_ 96 TDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA--------------GPAVGLVVQGGSS-- 159 (373)
T ss_pred ceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcC--------------CCceEEeeccCCe--
Confidence 45799999999986543211 11124678999999988776432 1233444443321
Q ss_pred ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec--CccceeEEEEeeCCE
Q psy2521 306 DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP--GMDHHHEIIANNGPE 383 (783)
Q Consensus 306 d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~--~~~~~~~~~s~dg~~ 383 (783)
.+ .....+ ..+.++|||+.+++.... ...+.+++..++..... ...... +.........++++.
T Consensus 160 --~~-~~~~~~---~~~~~s~~g~~~~v~~~~---dg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 225 (373)
T d2madh_ 160 --DD-QLLSSP---TCYHIHPGAPSTFYLLCA---QGGLAKTDHAGGAAGAG-----LVGAMLTAAQNLLTQPAQANKSG 225 (373)
T ss_pred --EE-EEeccc---eeEEEecCCCcEEEEEcC---CCeEEEEEcCCceeeEE-----EeeeccccCccceeeeEEECCCc
Confidence 11 111111 356789999988765433 25677888776321100 000000 000000112222222
Q ss_pred EEEEECCCCCCceEEEEcCCCCCCCC---------cEEeecCCCCceEEEEEEeeCCEEEEEEecC-------CeeEEEE
Q psy2521 384 LIVKTTKNAPKGKVVTINLNNPCEKN---------WKTLIPEDENRTLDVVAAVANNKLIVHYIQN-------VRSVMDL 447 (783)
Q Consensus 384 l~~~t~~~~~~~~L~~~d~~~~~~~~---------~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~-------g~~~l~~ 447 (783)
.++... ...+++.++..+..... ....+...+..........++..+++..... ....+.+
T Consensus 226 ~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~ 302 (373)
T d2madh_ 226 RIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred eEEEec---CCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEE
Confidence 221111 11234444433321000 0000000001111112223333444332211 2256889
Q ss_pred EECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy2521 448 HDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 504 (783)
Q Consensus 448 ~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg 504 (783)
+|+.+|+.+..+..+. .+..+..++|++.++|...+. -.+++.||+ ++|
T Consensus 303 ~d~~t~~~~~~~~~~~-~~~~~a~spDG~~~l~vt~~~--d~~v~v~D~-----~tg 351 (373)
T d2madh_ 303 VTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAG--TEVLHIYDA-----GAG 351 (373)
T ss_pred EECCCCcEEEEecCCC-CeeEEEECCCCCEEEEEEeCC--CCeEEEEEC-----CCC
Confidence 9998898878777652 345677789998776554443 358999999 577
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.12 E-value=2.3e-08 Score=104.09 Aligned_cols=292 Identities=16% Similarity=0.138 Sum_probs=159.7
Q ss_pred ccCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecC-----CCc
Q psy2521 159 KYSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKS-----GSD 233 (783)
Q Consensus 159 ~~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~-----G~d 233 (783)
...+|+++|.++|..-.........+|+.+...++..--++. +. ...++|||||++|+++.... |..
T Consensus 5 ~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~------g~--~~~~a~SpDg~~l~v~~~~~~~~~~g~~ 76 (355)
T d2bbkh_ 5 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------GF--LPNPVVADDGSFIAHASTVFSRIARGER 76 (355)
T ss_dssp BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------CS--SCEEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred EeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEEC------CC--CCceEEcCCCCEEEEEeCCCccccccCC
Confidence 346789999999876544445566788887654432222221 11 12579999999998765421 233
Q ss_pred eEEEEEEECCCCccccccc--------cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCC
Q psy2521 234 WNTLHIKDVDTGKDYPEVL--------KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDK 305 (783)
Q Consensus 234 ~~~i~v~Dl~tg~~~~~~~--------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~ 305 (783)
...|++||+++++.+.... .......++|+|||+.+++..... ...++.+++.+...
T Consensus 77 d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--------------~~~~~~~~~~~~~~- 141 (355)
T d2bbkh_ 77 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP--------------APAVGVVDLEGKAF- 141 (355)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS--------------SCEEEEEETTTTEE-
T ss_pred CCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCC--------------CceeeeeecCCCcE-
Confidence 4579999999998654221 011224689999999998776321 22455555544321
Q ss_pred ceeEEecCCCCe-----eEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEee
Q psy2521 306 DIPVVEFPNGRS-----LGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANN 380 (783)
Q Consensus 306 d~~v~~~~~~~~-----~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~d 380 (783)
......+.... -...+.+++||+.+++..... ..+.+.+...... .....+ ....++.+
T Consensus 142 -~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~---~~~~~~~~~~~~~-------~~~~~~-----~~~~~~~~ 205 (355)
T d2bbkh_ 142 -KRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTE---GTPEITHTEVFHP-------EDEFLI-----NHPAYSQK 205 (355)
T ss_dssp -EEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSS---SCCEEEECCCCSC-------TTSCBC-----SCCEEETT
T ss_pred -eeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCC---CeEEEEecccccc-------eeccee-----eeccccCC
Confidence 11111111000 012457899999987764432 3444555544110 000000 01124455
Q ss_pred CCEEEEEECCCCCCceEEEEcCCCCCCCCcEE------------eecCCCCceEEEEEEeeCCEEEEEEecC-------C
Q psy2521 381 GPELIVKTTKNAPKGKVVTINLNNPCEKNWKT------------LIPEDENRTLDVVAAVANNKLIVHYIQN-------V 441 (783)
Q Consensus 381 g~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~------------li~~~~~~~l~~~~~~~g~~l~~~~~~~-------g 441 (783)
+..+++.+. ..+++.+++.++....+.. ..+.. .. ......++..+++..... +
T Consensus 206 ~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~--~~~~~~d~~~~~~~~~~~~~~~~~~~ 278 (355)
T d2bbkh_ 206 AGRLVWPTY----TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG-WQ--QVAYHRALDRIYLLVDQRDEWRHKTA 278 (355)
T ss_dssp TTEEEEEBT----TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS-SS--CEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCeEEEecC----CCeEEEEecCCCcEEEEeccCCcccceEeeeeeccc-eE--EEEEeCCCCeEEEEeccCCceeecCC
Confidence 555555432 2346666665443100000 01111 11 112334445666655433 2
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 504 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg 504 (783)
...|.+||+.+++.+..+..+ ..+..+.++||++.++|...+.. .+|+.+|+ +++
T Consensus 279 ~~~v~v~d~~t~~~~~~~~~~-~~~~~~a~spDG~~~l~v~~~~d--~~i~v~D~-----~tg 333 (355)
T d2bbkh_ 279 SRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGD--KTLYIHDA-----ESG 333 (355)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTT--TEEEEEET-----TTC
T ss_pred CCeEEEEeCCCCcEEEEecCC-CCEEEEEEcCCCCeEEEEEECCC--CEEEEEEC-----CCC
Confidence 368999999889887777653 34556778899887666554433 68999999 577
|
| >d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Hypothetical protein VC1974 domain: Hypothetical protein VC1974 species: Vibrio cholerae [TaxId: 666]
Probab=99.11 E-value=4.2e-10 Score=111.34 Aligned_cols=103 Identities=17% Similarity=0.106 Sum_probs=67.6
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
+...|+||++||..+.+.. |.. ....|.+.||.|+++|+||.|....... ....+...+...+.....
T Consensus 13 ~~~~P~ivllHG~~~~~~~--~~~-~~~~L~~~g~~vi~~Dl~G~G~s~~~~~---------~~~~~~~~~~~~~~~~~~ 80 (264)
T d1r3da_ 13 TARTPLVVLVHGLLGSGAD--WQP-VLSHLARTQCAALTLDLPGHGTNPERHC---------DNFAEAVEMIEQTVQAHV 80 (264)
T ss_dssp BTTBCEEEEECCTTCCGGG--GHH-HHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCCHHH--HHH-HHHHHHhCCCEEEEEecccccccccccc---------cccchhhhhhhhcccccc
Confidence 4567999999998776543 444 3455665799999999999654321110 011122222223333333
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
...+++.++|||+||.++..++.++|+....++..
T Consensus 81 ~~~~~~~lvGhS~Gg~ia~~~a~~~~~~~~~~~~~ 115 (264)
T d1r3da_ 81 TSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGA 115 (264)
T ss_dssp CTTSEEEEEEETHHHHHHHHHHHHTTTTTSEEEEE
T ss_pred cccCceeeeeecchHHHHHHHHHhCchhccccccc
Confidence 45578999999999999999999999977766654
|
| >d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Haloalkane dehalogenase domain: Haloalkane dehalogenase species: Sphingomonas paucimobilis, UT26, LinB [TaxId: 13689]
Probab=99.09 E-value=3.1e-10 Score=114.90 Aligned_cols=118 Identities=10% Similarity=0.005 Sum_probs=77.4
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQ 613 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~ 613 (783)
.||.+|.+... |+.|+||++||.++.+.. |... ...|++ +|.|+++|.||.|.... ... .....
T Consensus 15 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~--~~~~-~~~L~~-~~~vi~~Dl~G~G~S~~---~~~-~~~~~ 78 (298)
T d1mj5a_ 15 IKGRRMAYIDE--------GTGDPILFQHGNPTSSYL--WRNI-MPHCAG-LGRLIACDLIGMGDSDK---LDP-SGPER 78 (298)
T ss_dssp ETTEEEEEEEE--------SCSSEEEEECCTTCCGGG--GTTT-GGGGTT-SSEEEEECCTTSTTSCC---CSS-CSTTS
T ss_pred ECCEEEEEEEE--------cCCCcEEEECCCCCCHHH--HHHH-HHHHhc-CCEEEEEeCCCCCCCCC---Ccc-ccccc
Confidence 48888875532 345789999998776644 3332 245664 89999999999543321 111 11112
Q ss_pred ChHHHHHHHHHH-HHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCc
Q psy2521 614 NCFDDFQAAAEY-MINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGA 669 (783)
Q Consensus 614 ~~~~D~~a~~~~-l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~ 669 (783)
....+..+.+.. +.+. ...+++.++|||+||.++..++.++|+.+.+++...+.
T Consensus 79 ~~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~l~~~~~~ 133 (298)
T d1mj5a_ 79 YAYAEHRDYLDALWEAL--DLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAI 133 (298)
T ss_dssp SCHHHHHHHHHHHHHHT--TCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEEC
T ss_pred cccchhhhhhccccccc--cccccCeEEEecccchhHHHHHHHHHhhhheeeccccc
Confidence 223444444443 3343 23458999999999999999999999999988876543
|
| >d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: A novel bacterial esterase domain: A novel bacterial esterase species: Alcaligenes sp. [TaxId: 512]
Probab=99.02 E-value=1.7e-11 Score=126.77 Aligned_cols=217 Identities=13% Similarity=0.013 Sum_probs=109.1
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH----HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI----SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQN 614 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~----~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~ 614 (783)
+.+.+..|.+ .++.| ||++||++..+..+.... .+..++.++||.|+++|+||.|..+...........
T Consensus 46 ~~v~~~~p~~---~~~~P-vvllHG~~~~~~~w~~~~~~~~~~~~~~~~~Gy~V~~~D~~G~G~S~~~~~~~~~~~~--- 118 (318)
T d1qlwa_ 46 MYVRYQIPQR---AKRYP-ITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKL--- 118 (318)
T ss_dssp EEEEEEEETT---CCSSC-EEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHT---
T ss_pred EEEEEECCCC---CCCCc-EEEECCCCCCcCccccCcccchhHHHHHHhCCCEEEEecCCCCCCCCCccccCCHHHH---
Confidence 3444455654 34566 566899988765543321 234555557999999999998877754322211111
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCCcchhhhcccccc-ccc----chhhh
Q psy2521 615 CFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVGALDMLRFNKFTI-AYY----SESEF 688 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~~~d~~~~~~~~~-~~~----~~~~~ 688 (783)
...+..++..-.....++++.|+|+||.++..++...+. ....++...++.+......... ... .....
T Consensus 119 -----~~~~~~~l~~~~~~~~~~~~~g~s~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (318)
T d1qlwa_ 119 -----GKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL 193 (318)
T ss_dssp -----TSSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHhhcccccccccccchhHHHHHHhhhcCccccceeeEeccccccccchhhhhhhHHHHHHHHhhh
Confidence 111111111112234567788999999887776654432 1111111111111110000000 000 00000
Q ss_pred CC-------CCCHHHHHHH-------H---------hcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcH-----HHHHH
Q psy2521 689 GS-------PNNKTHFHNL-------L---------SYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPL-----HSYKF 740 (783)
Q Consensus 689 g~-------p~~~~~~~~~-------~---------~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~-----~~~~~ 740 (783)
+. ......+..- + ..+|...... ++.| +|+++|++|.+||++ ++..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~P-~Lii~G~~D~~~p~~~~~~~~~~~~ 268 (318)
T d1qlwa_ 194 DGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGECPKPEDVKPL----TSIP-VLVVFGDHIEEFPRWAPRLKACHAF 268 (318)
T ss_dssp TSEEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCCCCGGGCGGG----TTSC-EEEEECSSCTTCTTTHHHHHHHHHH
T ss_pred ccccchhhhcccchhhhhhhhhhhHHHHHHhhhcccccchhhhhhh----ccCC-EEEEecCcCcccChhhhHHHHHHHH
Confidence 00 0000000000 0 0122222222 5667 999999999999964 45567
Q ss_pred HHHHHhhhCCCCCCCCcEEEEEeC-----CCCccCCccc-hhhhh
Q psy2521 741 IATLQEKIGSLPYQKNPLLLRVEQ-----DAGHGQGKAL-DIELK 779 (783)
Q Consensus 741 ~~~L~~~~~~~~~~~~~~~l~~~~-----~~gHg~~~~~-~~~~~ 779 (783)
++.|+++ |.++++..+| |+||..-... +..+.
T Consensus 269 ~~~l~~~-------g~~~~~~~lp~~gi~G~gH~~~~e~~~~~va 306 (318)
T d1qlwa_ 269 IDALNAA-------GGKGQLMSLPALGVHGNSHMMMQDRNNLQVA 306 (318)
T ss_dssp HHHHHHT-------TCCEEEEEGGGGTCCCCCTTGGGSTTHHHHH
T ss_pred HHHHHHh-------CCCcEEEEecccccCCCcCccccCcCHHHHH
Confidence 7888888 8889999876 5669864433 34443
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.99 E-value=8.1e-08 Score=98.83 Aligned_cols=237 Identities=10% Similarity=0.012 Sum_probs=141.0
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMG 291 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~ 291 (783)
.+++||||++|||.. | ..++++|+++++....-.. ......++|+|||+.|+-... .
T Consensus 22 ~~a~~~~g~~l~~~~---~---~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~----------------d 79 (311)
T d1nr0a1 22 VLGNTPAGDKIQYCN---G---TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV----------------H 79 (311)
T ss_dssp CCEECTTSSEEEEEE---T---TEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET----------------T
T ss_pred EEEEcCCCCEEEEEe---C---CEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEecccc----------------C
Confidence 467899999999974 2 2489999998865542211 223368899999998875552 2
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcc
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMD 371 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~ 371 (783)
..|.+|++.+........+..... ....+.|+|||++|+..... ....+.+++++++.. ...+.....
T Consensus 80 g~i~iwd~~~~~~~~~~~~~~~~~--~v~~v~~s~d~~~l~~~~~~--~~~~~~v~~~~~~~~--------~~~l~~h~~ 147 (311)
T d1nr0a1 80 GNVRIWDTTQTTHILKTTIPVFSG--PVKDISWDSESKRIAAVGEG--RERFGHVFLFDTGTS--------NGNLTGQAR 147 (311)
T ss_dssp SEEEEEESSSTTCCEEEEEECSSS--CEEEEEECTTSCEEEEEECC--SSCSEEEEETTTCCB--------CBCCCCCSS
T ss_pred ceEeeeeeeccccccccccccccC--cccccccccccccccccccc--ccccccccccccccc--------ccccccccc
Confidence 368888887654332233333222 34678999999998866432 123466777766311 111211111
Q ss_pred ceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEEC
Q psy2521 372 HHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 372 ~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl 450 (783)
.-.. .|+|+++.+++....+ +.|..+|+.+.. ........ ...+..+.+..++.+++....++ .+.+||+
T Consensus 148 ~v~~v~~~~~~~~~l~sgs~d---~~i~i~d~~~~~---~~~~~~~~-~~~i~~v~~~p~~~~l~~~~~d~--~v~~~d~ 218 (311)
T d1nr0a1 148 AMNSVDFKPSRPFRIISGSDD---NTVAIFEGPPFK---FKSTFGEH-TKFVHSVRYNPDGSLFASTGGDG--TIVLYNG 218 (311)
T ss_dssp CEEEEEECSSSSCEEEEEETT---SCEEEEETTTBE---EEEEECCC-SSCEEEEEECTTSSEEEEEETTS--CEEEEET
T ss_pred ccccccccccceeeecccccc---cccccccccccc---cccccccc-cccccccccCccccccccccccc--ccccccc
Confidence 1122 4889988766544332 357788887644 22233222 23344444443355555555554 5888998
Q ss_pred CCCceeeeecCC-------CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 451 NTGKRLHSFPLD-------LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 451 ~~G~~~~~l~~~-------~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++....+... .+.|..+.+++++..++. .+ . -..++.||+
T Consensus 219 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~t-gs-~--Dg~v~iwd~ 267 (311)
T d1nr0a1 219 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS-AS-A--DKTIKIWNV 267 (311)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE-EE-T--TSEEEEEET
T ss_pred ccccccccccccccccccccccccccccCCCCCEEEE-Ee-C--CCeEEEEEC
Confidence 777765554322 345777888888876553 22 2 247999998
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.96 E-value=1.4e-07 Score=97.07 Aligned_cols=209 Identities=11% Similarity=0.070 Sum_probs=122.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|||||++||-+... .+|++||+.+++.... ++. ......++|+||++.|+....+
T Consensus 60 ~v~~~~~sp~g~~latg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~----------- 123 (311)
T d1nr0a1 60 QTTVAKTSPSGYYCASGDVH-----GNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEG----------- 123 (311)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECC-----------
T ss_pred CEEEEEEeCCCCeEeccccC-----ceEeeeeeeccccccccccccccCcccccccccccccccccccc-----------
Confidence 47889999999999865432 4699999998764321 121 1223578999999988766622
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
....+.++++.+......+ .. .......+.|+|||++++++... ...|.++|+.++. ....
T Consensus 124 ---~~~~~~v~~~~~~~~~~~l--~~--h~~~v~~v~~~~~~~~~l~sgs~---d~~i~i~d~~~~~---------~~~~ 184 (311)
T d1nr0a1 124 ---RERFGHVFLFDTGTSNGNL--TG--QARAMNSVDFKPSRPFRIISGSD---DNTVAIFEGPPFK---------FKST 184 (311)
T ss_dssp ---SSCSEEEEETTTCCBCBCC--CC--CSSCEEEEEECSSSSCEEEEEET---TSCEEEEETTTBE---------EEEE
T ss_pred ---ccccccccccccccccccc--cc--cccccccccccccceeeeccccc---ccccccccccccc---------cccc
Confidence 1223445566554322211 11 12234678899999987665433 2578899988731 1112
Q ss_pred ecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC------CCceEEEEEEeeCCEEEEEEe
Q psy2521 367 IPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED------ENRTLDVVAAVANNKLIVHYI 438 (783)
Q Consensus 367 ~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~------~~~~l~~~~~~~g~~l~~~~~ 438 (783)
........ . .|+|+++.|+..+.. +.+..+|+..+.. ...+... ....+..+.+..++.++++..
T Consensus 185 ~~~~~~~i~~v~~~p~~~~l~~~~~d----~~v~~~d~~~~~~---~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs 257 (311)
T d1nr0a1 185 FGEHTKFVHSVRYNPDGSLFASTGGD----GTIVLYNGVDGTK---TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 257 (311)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCE---EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred cccccccccccccCcccccccccccc----ccccccccccccc---cccccccccccccccccccccccCCCCCEEEEEe
Confidence 22222222 2 588998877765543 3477778765431 1111111 012233444433345555666
Q ss_pred cCCeeEEEEEECCCCceeeeecCC
Q psy2521 439 QNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 439 ~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
.|+ .|++||+.+|+.++.+...
T Consensus 258 ~Dg--~v~iwd~~t~~~~~~l~~~ 279 (311)
T d1nr0a1 258 ADK--TIKIWNVATLKVEKTIPVG 279 (311)
T ss_dssp TTS--EEEEEETTTTEEEEEEECC
T ss_pred CCC--eEEEEECCCCcEEEEEECC
Confidence 665 6999999899887777654
|
| >d2b61a1 c.69.1.40 (A:2-358) Homoserine O-acetyltransferase {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Haemophilus influenzae [TaxId: 727]
Probab=98.88 E-value=1.3e-08 Score=105.88 Aligned_cols=114 Identities=16% Similarity=0.188 Sum_probs=74.7
Q ss_pred CCccEEEEecCCCCCccC------CcCcHHH---HHHHHcCCEEEEEecCCCCCC--CChhHHhh--cc---ccCCcChH
Q psy2521 553 RRNPVIIYGYGGYGVSVL------PTFSISR---CMFLRHFNGIYAIPNIRGGGE--LGEDWHNA--GR---LLKKQNCF 616 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~------~~~~~~~---~~~l~~~G~~v~~~~~RG~g~--~G~~~~~~--g~---~~~~~~~~ 616 (783)
.+.++||+.|+-.|.+.. ++|-..+ ...++-.-|-|+++|+-|++. -|..-... |. ...-.-++
T Consensus 37 ~~~NaVlv~h~~tg~~~~~~~~~~~gWW~~liG~g~alDt~kyfVI~~n~lG~~~gSs~p~s~~p~tg~~~g~~FP~iti 116 (357)
T d2b61a1 37 EKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVV 116 (357)
T ss_dssp TCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCH
T ss_pred CCCCEEEEcCCCCccccccccCCCCCcHHHhcCCCCccCCCceEEEEecccCCccccCCcCCCCCCCCCCCCcccccchh
Confidence 456899999986554322 1221110 123444469999999998652 12111000 00 11224578
Q ss_pred HHHHHHHHHHHHcCCCCCCcE-EEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 617 DDFQAAAEYMINKKYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 617 ~D~~a~~~~l~~~~~~d~~ri-~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.|.+.+-.-|+++ ..-+|| +++|+||||+.++..+.++||....+|+.++
T Consensus 117 ~D~v~aq~~Ll~~--LGI~~l~~viG~SmGGmqAl~wa~~~Pd~v~~~i~i~~ 167 (357)
T d2b61a1 117 QDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCS 167 (357)
T ss_dssp HHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESC
T ss_pred HHHHHHHHHHHHH--hCcceEEEEecccHHHHHHHHHHHhhhHHHhhhccccc
Confidence 9999998888876 233577 8889999999999999999999998887765
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.87 E-value=1.2e-07 Score=99.78 Aligned_cols=298 Identities=8% Similarity=-0.034 Sum_probs=146.0
Q ss_pred cCCcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEec-----CCCce
Q psy2521 160 YSAPQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSK-----SGSDW 234 (783)
Q Consensus 160 ~~~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~-----~G~d~ 234 (783)
...|..+|.+.|............+|..+..+++..-.+.. +. ...+.|||||+.|++.... .|+..
T Consensus 24 ~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~------~~--~~~~a~spDg~~i~~~~~~~~~~~~g~~d 95 (368)
T d1mdah_ 24 DHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLG------AF--LSLAVAGHSGSDFALASTSFARSAKGKRT 95 (368)
T ss_dssp CCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE------CT--TCEEEECTTSSCEEEEEEEETTTTSSSEE
T ss_pred ccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeC------CC--CCcceECCCCCEEEEEcccCccccccccC
Confidence 34677788877665543334456788887644443222221 11 1358899999999987653 34555
Q ss_pred EEEEEEECCCCccccccc--------cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCc
Q psy2521 235 NTLHIKDVDTGKDYPEVL--------KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKD 306 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~--------~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d 306 (783)
..|+++|+.+++.+.... .......++|||||++|++.... +..++++++.+...
T Consensus 96 ~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~---------------~~~v~~~d~~~~~~-- 158 (368)
T d1mdah_ 96 DYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---------------SSAAAGLSVPGASD-- 158 (368)
T ss_dssp EEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS---------------SSCEEEEEETTTEE--
T ss_pred CeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCC---------------CCeEEEEECCCCcE--
Confidence 679999999998654221 11223578999999999987632 23577777766421
Q ss_pred eeEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeC
Q psy2521 307 IPVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNG 381 (783)
Q Consensus 307 ~~v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg 381 (783)
......+..... ...+..++||+.+++...... ...+. +.... ... ........... ... ..+.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~~~~--~~~~~-~~~~~-~~~--~~~~~~~~~~~-~~g-~~~~~~~ 230 (368)
T d1mdah_ 159 DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAP--AAAGI-VGAQC-TGA--QNCSSQAAQAN-YPG-MLVWAVA 230 (368)
T ss_dssp EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSC--CCCEE-CCCCS-CTT--SCBCSCCEEET-TTT-EEEECBS
T ss_pred eEEeeccCcceEccCCCceEEEEcCCCCEEEEEecCCc--eeeee-eeccc-ccc--cccceeecccc-cCc-EEEEecC
Confidence 112222221100 012445677776655433221 11121 11110 000 00000000000 000 1122222
Q ss_pred CEEEEEECCCCCCceEEEEcCCCCCCCC-c-EEeecCCCCceEEEEEEeeCCEEEEEEecCC------eeEEEEEECCCC
Q psy2521 382 PELIVKTTKNAPKGKVVTINLNNPCEKN-W-KTLIPEDENRTLDVVAAVANNKLIVHYIQNV------RSVMDLHDLNTG 453 (783)
Q Consensus 382 ~~l~~~t~~~~~~~~L~~~d~~~~~~~~-~-~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g------~~~l~~~dl~~G 453 (783)
..++...-... .+..++........ . ....+.. ... .....+++.+++....+. ..+|+++|+.+|
T Consensus 231 ~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g-~~~--~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~ 304 (368)
T d1mdah_ 231 SSILQGDIPAA---GATMKAAIDGNESGRKADNFRSAG-FQM--VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp SCCEEEECCSS---CCEEECCCCSSCTHHHHTTEEECS-SSC--EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred CCEEEEeecCC---ceEEEeecccccceeeeeeecCCC-cee--EEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC
Confidence 22222211110 11111111110000 0 0001111 111 123334466666554432 367999999889
Q ss_pred ceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCC
Q psy2521 454 KRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQD 504 (783)
Q Consensus 454 ~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg 504 (783)
+.+..+..+ +.+.++.+++|++.++|...+.. .+++.||. ++|
T Consensus 305 ~~~~~~~~~-~~~~~~a~spDG~~~ly~s~~~~--~~v~v~D~-----~tg 347 (368)
T d1mdah_ 305 QTSGPISNG-HDSDAIIAAQDGASDNYANSAGT--EVLDIYDA-----ASD 347 (368)
T ss_dssp CEEECCEEE-EEECEEEECCSSSCEEEEEETTT--TEEEEEES-----SSC
T ss_pred cEeEEecCC-CceeEEEECCCCCEEEEEEeCCC--CeEEEEEC-----CCC
Confidence 877666543 44556778899876555444433 57999999 566
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=2.7e-07 Score=94.56 Aligned_cols=268 Identities=11% Similarity=-0.012 Sum_probs=129.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc----cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE----VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~----~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
+..++|||||++|+.+...+ ..|++++++++..... ........+++|+|||+.|+.....
T Consensus 39 v~~la~spDG~~L~v~~~~d----~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~----------- 103 (333)
T d1ri6a_ 39 VQPMVVSPDKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN----------- 103 (333)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT-----------
T ss_pred EeEEEEeCCCCEEEEEECCC----CeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccC-----------
Confidence 46789999999996554322 3577888766542211 1112223579999999998877632
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
...+..+......... ............++.+||||++++..... ...+++++.... .............
T Consensus 104 ----~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~v~~s~d~~~~~~~~~~---~~~i~~~~~~~~-~~~~~~~~~~~~~ 173 (333)
T d1ri6a_ 104 ----AGNVSVTRLEDGLPVG--VVDVVEGLDGCHSANISPDNRTLWVPALK---QDRICLFTVSDD-GHLVAQDPAEVTT 173 (333)
T ss_dssp ----TTEEEEEEEETTEEEE--EEEEECCCTTBCCCEECTTSSEEEEEEGG---GTEEEEEEECTT-SCEEEEEEEEEEC
T ss_pred ----CCceeeecccccccee--cccccCCCccceEEEeeecceeeeccccc---cceeeEEEeccC-Ccceeeeceeeee
Confidence 2245444443322111 11111111122467899999998766433 256777776552 1110000000001
Q ss_pred ecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec--CC---CCceEEEEEEeeCCEEEEEEecCC
Q psy2521 367 IPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP--ED---ENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 367 ~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~--~~---~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
..+.....-.+++++..++..... .....++.++...........+.. .. ...........+++.+++.....+
T Consensus 174 ~~g~~p~~i~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~ 252 (333)
T d1ri6a_ 174 VEGAGPRHMVFHPNEQYAYCVNEL-NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS 252 (333)
T ss_dssp STTCCEEEEEECTTSSEEEEEETT-TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT
T ss_pred ecCCCccEEEEeccceeEEeeccc-cCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCC
Confidence 111111122578888777665433 223334444433322111112211 11 011222233445456666665555
Q ss_pred eeEEEEEECCCCceeeeec-CC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeCCCCcCCCCCCceEEEee
Q psy2521 442 RSVMDLHDLNTGKRLHSFP-LD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIPENITDQDDFKPTIFRE 513 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~-~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~~~~~~tg~~~~~~~~~ 513 (783)
...++..+. ++....... .+ .+...++.++||++.++++ .+...--.+|++|. ++| +.+.+..
T Consensus 253 ~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va-~~~~~~v~v~~id~-----~tG--~l~~~~~ 317 (333)
T d1ri6a_ 253 LITVFSVSE-DGSVLSKEGFQPTETQPRGFNVDHSGKYLIAA-GQKSHHISVYEIVG-----EQG--LLHEKGR 317 (333)
T ss_dssp EEEEEEECT-TSCCEEEEEEEECSSSCCCEEECTTSSEEEEE-CTTTCEEEEEEEET-----TTT--EEEEEEE
T ss_pred eEEEEEEcC-CCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEE-ECCCCeEEEEEEEC-----CCC--cEEEEEe
Confidence 555555554 333222111 11 1223356678999887654 23322235777787 577 5544433
|
| >d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=1e-08 Score=101.66 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=68.4
Q ss_pred cEEEEecCCCCCccCCcCcHHHHHHHHc--CCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 556 PVIIYGYGGYGVSVLPTFSISRCMFLRH--FNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 556 P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
|.||++||.++.+.. |.... ..|.+ .||.|+++|.|| +|.+-.. ....++++...+..++++. .
T Consensus 3 ~PvvllHG~~~~~~~--~~~~~-~~l~~~~~~~~v~~~d~~G---~g~S~~~------~~~~~~~~~~~l~~~l~~l--~ 68 (268)
T d1pjaa_ 3 KPVIVVHGLFDSSYS--FRHLL-EYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA--P 68 (268)
T ss_dssp CCEEEECCTTCCGGG--GHHHH-HHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC--T
T ss_pred CCEEEECCCCCCHHH--HHHHH-HHHHhhCCCeEEEEeCCCC---CCCCCCc------cccCHHHHHHHHHHHHhcc--C
Confidence 335678998776643 44333 33433 389999999999 4433211 1234666776666666553 3
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEcCC
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPE-LYGAALILVG 668 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~~~ 668 (783)
+++.++|||+||.++..++.++|+ ..+.+|+..+
T Consensus 69 -~~~~lvGhS~GG~ia~~~a~~~p~~~v~~lvl~~~ 103 (268)
T d1pjaa_ 69 -QGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSS 103 (268)
T ss_dssp -TCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESC
T ss_pred -CeEEEEccccHHHHHHHHHHHCCccccceEEEECC
Confidence 699999999999999999999999 4888777655
|
| >d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Esterase EstA species: Aspergillus niger [TaxId: 5061]
Probab=98.83 E-value=9.3e-09 Score=114.22 Aligned_cols=224 Identities=16% Similarity=0.099 Sum_probs=126.5
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChh-HHhhccccCCcChH
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGED-WHNAGRLLKKQNCF 616 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~-~~~~g~~~~~~~~~ 616 (783)
+..-|+.|+....+.+.|++||+|||.-.. ....+......+....+++|+.+|||-|- +|-= .........+...+
T Consensus 81 L~LnI~~P~~~~~~~~~PV~v~ihGG~~~~G~~~~~~~~~~~~~~~~~vVvVt~nYRlg~-~GFl~~~~~~~~~~~N~Gl 159 (517)
T d1ukca_ 81 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGA-LGFLASEKVRQNGDLNAGL 159 (517)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHH-HHHCCCHHHHHSSCTTHHH
T ss_pred CEEEEEeCCCCCCCCCceEEEEEcCCccccCCCccccchhhhhhhccccceEEEEecccc-eeecCccccccccccchhH
Confidence 455567787655567889999999983222 22234433323334457899999999632 2200 00000011223458
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc----CCCceeEEEEcCCcchhhhccccc--ccccchhh
Q psy2521 617 DDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ----RPELYGAALILVGALDMLRFNKFT--IAYYSESE 687 (783)
Q Consensus 617 ~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~----~p~lf~a~i~~~~~~d~~~~~~~~--~~~~~~~~ 687 (783)
.|.+.|++|++++ -..||++|.|+|+|+||..+...+.. ...||..+|+.+|........... ........
T Consensus 160 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s~~~~~~gLF~raI~qSg~~~~~~~~~~~~~~~~~~a~~ 239 (517)
T d1ukca_ 160 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQFERFVND 239 (517)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCcccccccccccchhhHHHHHhccccccccccceeeecccccccccchhhHHHHHHHHHhh
Confidence 8999999999875 23699999999999999999877654 123999999999865322111000 00011233
Q ss_pred hCCCCCHHHHHHHHhcCccc------CCCCCCC-CCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEE
Q psy2521 688 FGSPNNKTHFHNLLSYSPLH------NIKVPPN-NTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLL 760 (783)
Q Consensus 688 ~g~p~~~~~~~~~~~~sp~~------~v~~~~~-~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l 760 (783)
.|.....+..+.|+..+... ....+.. ....| .....-..|..+-+.+..++++.=+.. .+|+++
T Consensus 240 lg~~~~~~~l~cLr~~~~~~L~~a~~~~~~~~~~~~~~~-~~~~~pv~Dg~~lp~~p~~~~~~g~~~-------~vplli 311 (517)
T d1ukca_ 240 TGCSSARDSLECLREQDIATIQKGNTGSPFPGGSSSPLP-DWYFLPVTDGSLVPDELYNAFDAGNFI-------KVPVLV 311 (517)
T ss_dssp TTCTTCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCC-SCCSCCCCCSSSSCSCHHHHHHHTCSC-------CCCEEE
T ss_pred hcccchhhhHhhhccCCHHHHHHhhhccccccccccccc-cccccceecccccccChHHHhhcCCcc-------ccceEE
Confidence 46554444556666554321 0000000 00111 111122456666666665554432222 678999
Q ss_pred EEeCCCCccCC
Q psy2521 761 RVEQDAGHGQG 771 (783)
Q Consensus 761 ~~~~~~gHg~~ 771 (783)
=.-.++|..|.
T Consensus 312 G~t~~Eg~~f~ 322 (517)
T d1ukca_ 312 GDDTDEGSNFA 322 (517)
T ss_dssp EEETBGGGGTS
T ss_pred eeccCchhhhh
Confidence 88888887764
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.78 E-value=2.6e-07 Score=94.92 Aligned_cols=117 Identities=13% Similarity=0.082 Sum_probs=73.2
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-cc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
++++|++|++|+..... .+|.|+|+++++.+... +. .....+++|+|||+.+|.+.. .
T Consensus 1 g~a~~~~~~~l~~~~~~-----~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~---------------~ 60 (346)
T d1jmxb_ 1 GPALKAGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---------------H 60 (346)
T ss_dssp CCCCCTTCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---------------T
T ss_pred CccCCCCCcEEEEEcCC-----CEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEEC---------------C
Confidence 36799999999886543 46999999999876422 22 223358999999998876652 2
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCC-e---eEEEEEEecCCcEEEEEEecCC--------CCcEEEEEECCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGR-S---LGLHSEVTDCGRYLLVSTSNNT--------QGSDLHYFDLHS 351 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~-~---~~~~~~~SpDGk~l~~~~~~~~--------~~~~l~~~dl~~ 351 (783)
...|+.+++.+... +..+...... . ...++.+||||+++++...... ....+.+++..+
T Consensus 61 ~~~v~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~ 131 (346)
T d1jmxb_ 61 YGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 131 (346)
T ss_dssp TTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred CCcEEEEeCccCee--eeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccc
Confidence 34688888876521 1111111111 0 1135789999999977653211 124566676655
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.78 E-value=6.8e-07 Score=93.94 Aligned_cols=244 Identities=11% Similarity=0.084 Sum_probs=131.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
+...+|||||++||++.. ...|++||+++++.... ++. ......++|+||++.|+-...
T Consensus 10 It~~~~s~dg~~la~~~~-----~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~------------- 71 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT------------- 71 (371)
T ss_dssp CCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-------------
T ss_pred eEEEEECCCCCEEEEEeC-----CCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEEC-------------
Confidence 567899999999998642 24699999988864322 222 122358899999998775542
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
...|+++++.+......+.+.... .-...+.|+|||++++..... ..-.+|.++.... . .......
T Consensus 72 ---D~~i~vWd~~~~~~~~~~~~~~~~--~~v~~i~~~p~~~~l~~~s~d--~~i~i~~~~~~~~---~----~~~~~~~ 137 (371)
T d1k8kc_ 72 ---DRNAYVWTLKGRTWKPTLVILRIN--RAARCVRWAPNEKKFAVGSGS--RVISICYFEQEND---W----WVCKHIK 137 (371)
T ss_dssp ---TSCEEEEEEETTEEEEEEECCCCS--SCEEEEEECTTSSEEEEEETT--SSEEEEEEETTTT---E----EEEEEEC
T ss_pred ---CCeEEEEeeccccccccccccccc--ccccccccccccccceeeccc--Ccceeeeeecccc---c----ccccccc
Confidence 225777777654333223222222 234678999999998876433 2234444443321 0 0001111
Q ss_pred cCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCC------Cc-------EEeec-CCCCceEEEE-EEeeC
Q psy2521 368 PGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEK------NW-------KTLIP-EDENRTLDVV-AAVAN 430 (783)
Q Consensus 368 ~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~------~~-------~~li~-~~~~~~l~~~-~~~~g 430 (783)
....... . .|+|+|+.|+..+.. +.+..+++...... .+ +.+.. ......+..+ +.+++
T Consensus 138 ~~~~~~v~~v~~~p~~~~l~s~s~D----~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 213 (371)
T d1k8kc_ 138 KPIRSTVLSLDWHPNSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 213 (371)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred cccccccccccccccccceeccccC----cEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccc
Confidence 1222222 2 488998877654432 23555554332100 00 01111 1111223333 33443
Q ss_pred CEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 431 NKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 431 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+. ++....++ .|.+||+.+++.+..+......+..+.+++++..+. + +...-..++.++.
T Consensus 214 ~~-l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la-~--g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 214 SR-VAWVSHDS--TVCLADADKKMAVATLASETLPLLAVTFITESSLVA-A--GHDCFPVLFTYDS 273 (371)
T ss_dssp SE-EEEEETTT--EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEE-E--ETTSSCEEEEEET
T ss_pred cc-ccccccCC--cceEEeeecccceeeeecccccceeeeecCCCCEEE-E--EcCCceEEEEeeC
Confidence 44 44445553 688999988887777765544566677777764433 2 3333345777776
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.78 E-value=1.7e-06 Score=90.39 Aligned_cols=171 Identities=11% Similarity=0.012 Sum_probs=102.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
....++||||+++++......+...++|++|.++|+.+.. +.......++|||||+.|++....... ......
T Consensus 23 ~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~-~~~~~~~~~a~SpDG~~l~va~~~~~~------~~~~~~ 95 (373)
T d2madh_ 23 TNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH-VNGGFLPNPVAAHSGSEFALASTSFSR------IAKGKR 95 (373)
T ss_pred ccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEE-EeCCCCccEEEcCCCCEEEEEeecCCc------cccccc
Confidence 4567899999999876554444446899999999997753 332333579999999999998754321 001123
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|.++++.+.+.. .....+..... ...+.+++||+++++..... .+.+.+++...+. ...
T Consensus 96 ~~~v~v~D~~t~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--~~~~~~~~~~~~~---------~~~ 162 (373)
T d2madh_ 96 TDYVEVFDPVTFLPI--ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA--GPAVGLVVQGGSS---------DDQ 162 (373)
T ss_pred ceEEEEEECCCCcEE--EEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcC--CCceEEeeccCCe---------EEE
Confidence 456788887765421 11122221111 12467999999988765442 2456666665520 111
Q ss_pred eecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 366 VIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 366 l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
... ......++++|+.+++.... ...+..++.....
T Consensus 163 ~~~--~~~~~~~s~~g~~~~v~~~~---dg~~~~~~~~~~~ 198 (373)
T d2madh_ 163 LLS--SPTCYHIHPGAPSTFYLLCA---QGGLAKTDHAGGA 198 (373)
T ss_pred Eec--cceeEEEecCCCcEEEEEcC---CCeEEEEEcCCce
Confidence 111 11122588999887765543 3457778876544
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.77 E-value=5.1e-07 Score=97.03 Aligned_cols=131 Identities=12% Similarity=0.037 Sum_probs=82.9
Q ss_pred CeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEE
Q psy2521 193 STEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYN 272 (783)
Q Consensus 193 ~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~ 272 (783)
.++++++++..... +.+++|.+.+.+.... +..+|.|+|++|++.+.....+....+++|||||+.||..
T Consensus 10 s~~~~~~~~~~p~~-------~~~~~d~~~~~~V~~~---~dg~v~vwD~~t~~~~~~l~~g~~~~~vafSPDGk~l~~~ 79 (426)
T d1hzua2 10 SWKVLVKPEDRPKK-------QLNDLDLPNLFSVTLR---DAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVI 79 (426)
T ss_dssp HCEESSCGGGSCSS-------CCSCCCGGGEEEEEET---TTTEEEEEETTTCSEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred hheeeCCcccCCCc-------ccccCCCCeEEEEEEc---CCCEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEE
Confidence 35777777665422 4577887777665443 2257999999999876533222334689999999988654
Q ss_pred EeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCC-CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 273 QYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNG-RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 273 ~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~-~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
. . ...|.++++.+.......-...... .....++.+||||++|++.... ...+.++|..+
T Consensus 80 ~-~---------------d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~---~~~v~i~d~~~ 140 (426)
T d1hzua2 80 G-R---------------DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYW---PPQFAIMDGET 140 (426)
T ss_dssp E-T---------------TSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE---SSEEEEEETTT
T ss_pred e-C---------------CCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecC---CCeEEEEcCCc
Confidence 4 1 2368888988765332221121111 1233466788999999866533 26788888877
Q ss_pred C
Q psy2521 352 L 352 (783)
Q Consensus 352 g 352 (783)
+
T Consensus 141 ~ 141 (426)
T d1hzua2 141 L 141 (426)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.76 E-value=1.8e-06 Score=86.63 Aligned_cols=208 Identities=14% Similarity=0.082 Sum_probs=125.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
...+.+++||++++.....+ ..++++|..+++...............|+|||+.+++....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~--------------- 136 (301)
T d1l0qa2 76 PQGVAVSPDGKQVYVTNMAS----STLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--------------- 136 (301)
T ss_dssp EEEEEECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT---------------
T ss_pred cccccccccccccccccccc----ceeeecccccceeeeeccccccceEEEeecCCCeeeeeecc---------------
Confidence 45788999999988765432 46889999988765433222223578899999998877722
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec-C
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP-G 369 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~-~ 369 (783)
...+..++..+.. .......... ...+.++||++++++.... ...+.+.+..... ...... .
T Consensus 137 ~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------~~~~~~~~ 199 (301)
T d1l0qa2 137 DKTVSVINTVTKA--VINTVSVGRS---PKGIAVTPDGTKVYVANFD---SMSISVIDTVTNS---------VIDTVKVE 199 (301)
T ss_dssp TTEEEEEETTTTE--EEEEEECCSS---EEEEEECTTSSEEEEEETT---TTEEEEEETTTTE---------EEEEEECS
T ss_pred ccceeeeeccccc--eeeecccCCC---ceEEEeeccccceeeeccc---cccccccccccee---------eeeccccc
Confidence 2245566655432 1222222222 2457899999998776432 2456666665520 111111 1
Q ss_pred ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 370 MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 370 ~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
.......++++|+.+++.... .....|..+|+.+++ ....++.. .....-...++|++|++....+ ..|.+||
T Consensus 200 ~~~~~~~~~~~g~~~~v~~~~-~~~~~v~v~D~~t~~---~~~~~~~~-~~~~~va~spdg~~l~va~~~~--~~i~v~D 272 (301)
T d1l0qa2 200 AAPSGIAVNPEGTKAYVTNVD-KYFNTVSMIDTGTNK---ITARIPVG-PDPAGIAVTPDGKKVYVALSFC--NTVSVID 272 (301)
T ss_dssp SEEEEEEECTTSSEEEEEEEC-SSCCEEEEEETTTTE---EEEEEECC-SSEEEEEECTTSSEEEEEETTT--TEEEEEE
T ss_pred CCcceeecccccccccccccc-ceeeeeeeeecCCCe---EEEEEcCC-CCEEEEEEeCCCCEEEEEECCC--CeEEEEE
Confidence 111122588999988875433 334569999987754 23334433 2333333445556777766555 3799999
Q ss_pred CCCCceeeeecC
Q psy2521 450 LNTGKRLHSFPL 461 (783)
Q Consensus 450 l~~G~~~~~l~~ 461 (783)
+++|+.+..++.
T Consensus 273 ~~t~~~~~~~~v 284 (301)
T d1l0qa2 273 TATNTITATMAV 284 (301)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCeEEEEEeC
Confidence 999988777764
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=1.6e-06 Score=89.58 Aligned_cols=234 Identities=9% Similarity=0.041 Sum_probs=136.4
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc--c--c-c-ccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE--V--L-K-NVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~--~--~-~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
.+..++|||||++||-.. + ..|+|||++++..... . . . ......++|+|||+.|+....
T Consensus 53 ~V~~v~fs~~g~~latg~-----d-g~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~--------- 117 (337)
T d1gxra_ 53 VVCAVTISNPTRHVYTGG-----K-GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE--------- 117 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-----B-SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---------
T ss_pred cEEEEEECCCCCEEEEEE-----C-CEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeec---------
Confidence 367789999999998542 2 3599999987653221 1 1 1 112357899999998876552
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
...|.++++...... ................++||+..++.... ...+.++++.++. .
T Consensus 118 -------dg~i~iwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d~~i~~~~~~~~~---------~ 175 (337)
T d1gxra_ 118 -------ASTLSIWDLAAPTPR--IKAELTSSAPACYALAISPDSKVCFSCCS----DGNIAVWDLHNQT---------L 175 (337)
T ss_dssp -------SSEEEEEECCCC--E--EEEEEECSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE---------E
T ss_pred -------ccccccccccccccc--ccccccccccccccccccccccccccccc----ccccccccccccc---------c
Confidence 236888887654332 22221111223456789999999875432 2578889987731 1
Q ss_pred eeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 364 KTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 364 ~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
........... . .|++++..++..+. .+.+..+|+.++. ........ .. +..+.+...+.+++....++
T Consensus 176 ~~~~~~~~~~v~~l~~s~~~~~~~~~~~----d~~v~i~d~~~~~---~~~~~~~~-~~-i~~l~~~~~~~~l~~~~~d~ 246 (337)
T d1gxra_ 176 VRQFQGHTDGASCIDISNDGTKLWTGGL----DNTVRSWDLREGR---QLQQHDFT-SQ-IFSLGYCPTGEWLAVGMESS 246 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTTE---EEEEEECS-SC-EEEEEECTTSSEEEEEETTS
T ss_pred cccccccccccccccccccccccccccc----cccccccccccce---eecccccc-cc-eEEEEEcccccccceecccc
Confidence 11222222222 2 47888888776543 3468888887654 11222222 23 33344333345555555554
Q ss_pred eeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+.+||+.+++.. ......+.+..+.++++++.++ +.+. -..+..||+
T Consensus 247 --~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~-s~s~---Dg~i~iwd~ 294 (337)
T d1gxra_ 247 --NVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFV-STGK---DNLLNAWRT 294 (337)
T ss_dssp --CEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEE-EEET---TSEEEEEET
T ss_pred --ccccccccccccc-cccccccccceEEECCCCCEEE-EEeC---CCeEEEEEC
Confidence 5888999766653 3333345677778888887554 3222 257889998
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.75 E-value=8.8e-07 Score=89.40 Aligned_cols=236 Identities=14% Similarity=0.102 Sum_probs=131.9
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.-.+..++|||||++||-+. .+ ..|++||+++|+.+..... ......++|+|||+ ++....
T Consensus 12 ~~~V~~l~~s~dg~~l~s~s-~D----g~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~----------- 74 (299)
T d1nr0a2 12 NKAITALSSSADGKTLFSAD-AE----GHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSW----------- 74 (299)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TT----SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEET-----------
T ss_pred CCCcEEEEECCCCCEEEEEc-CC----CeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccc-----------
Confidence 34578899999999987543 22 4599999999886543221 12235789999997 333331
Q ss_pred ccccCCceEEEEEcCCCCCCc-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKD-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d-~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
...+.++++....... ..+..... .....+.++|||+.++.... ..+.+++... ..
T Consensus 75 -----d~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~g~~~~~~~~-----~~i~~~~~~~-----------~~ 131 (299)
T d1nr0a2 75 -----DDHLKVVPAGGSGVDSSKAVANKLS--SQPLGLAVSADGDIAVAACY-----KHIAIYSHGK-----------LT 131 (299)
T ss_dssp -----TTEEEEECSSSSSSCTTSCCEEECS--SCEEEEEECTTSSCEEEEES-----SEEEEEETTE-----------EE
T ss_pred -----eeeEEEeccCCcccccccccccccc--cccccccccccccccccccc-----cccccccccc-----------cc
Confidence 1246666655432111 11111111 12356789999998765422 3567776543 11
Q ss_pred eeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeE
Q psy2521 365 TVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSV 444 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~ 444 (783)
..........-.++|+++.|+..+. ++.|..+|+.+...... ....+. . .+..+.+..++.+++....++ .
T Consensus 132 ~~~~~~~~~~~~~s~~~~~l~~g~~----dg~i~~~d~~~~~~~~~-~~~~~~-~-~i~~~~~~~~~~~l~~~~~d~--~ 202 (299)
T d1nr0a2 132 EVPISYNSSCVALSNDKQFVAVGGQ----DSKVHVYKLSGASVSEV-KTIVHP-A-EITSVAFSNNGAFLVATDQSR--K 202 (299)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEET----TSEEEEEEEETTEEEEE-EEEECS-S-CEEEEEECTTSSEEEEEETTS--C
T ss_pred ccccccccccccccccccccccccc----ccccccccccccccccc-cccccc-c-ccccccccccccccccccccc--c
Confidence 1222222222258899887776543 34688888766441111 122222 2 333444433345555555554 5
Q ss_pred EEEEECCCCceeeeec---CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 445 MDLHDLNTGKRLHSFP---LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 445 l~~~dl~~G~~~~~l~---~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
|++||+.++.....+. .....+..+.+++++..++.. +.. ..++.||+
T Consensus 203 i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sg--s~d--g~i~iwd~ 253 (299)
T d1nr0a2 203 VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATG--SLD--NSVIVWNM 253 (299)
T ss_dssp EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEE--ETT--SCEEEEET
T ss_pred cccccccccccccccccccccccccccccccccccceEEE--cCC--CEEEEEEC
Confidence 8899986665543322 224457777888888765532 222 46889998
|
| >d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida cylindracea, cholesterol esterase [TaxId: 44322]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Candida cylindracea, cholesterol esterase [TaxId: 44322]
Probab=98.74 E-value=4.7e-09 Score=117.17 Aligned_cols=128 Identities=19% Similarity=0.196 Sum_probs=87.6
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcHHH---HHHHHcCCEEEEEecCCCCCCCChhHHhh---ccccC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSISR---CMFLRHFNGIYAIPNIRGGGELGEDWHNA---GRLLK 611 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~---~~~l~~~G~~v~~~~~RG~g~~G~~~~~~---g~~~~ 611 (783)
+.+-|+.|+....+.+.|+|||+|||..... ...|.... ..++..++++|+.+|||-|- +| |... .....
T Consensus 98 L~LnI~~P~~~~~~~~~PVlv~ihGG~f~~g~~~~~~~~~~~~~~~~~~~~vIvVt~nYRLg~-~G--Fl~~~~~~~~~~ 174 (534)
T d1llfa_ 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVAS-WG--FLAGDDIKAEGS 174 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSHHHHHHTC
T ss_pred CEEEEEECCCCCCCCCCeEEEEECCCccccCCCCCCCchhccchhhhccCCeEEEEeecCCCc-cc--ccCCcccccccc
Confidence 5566677877666788999999999853322 22233321 22344569999999999642 22 1110 01113
Q ss_pred CcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc-----CC---CceeEEEEcCCc
Q psy2521 612 KQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ-----RP---ELYGAALILVGA 669 (783)
Q Consensus 612 ~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~-----~p---~lf~a~i~~~~~ 669 (783)
+...+.|.+.|++|++++ -..||+||.|+|+|+||..+.+.+.. .| .||..+|+.+|.
T Consensus 175 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~~~~~~~sp~s~gLF~raI~qSGs 243 (534)
T d1llfa_ 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred cccchhHHHHHHHHHHhhhhhhccCCcceeeeeecchHHHHHHHHhccccccccchhhhhhhhhhccCc
Confidence 334688999999999875 22699999999999999999877641 12 289999999984
|
| >d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Epoxide hydrolase domain: Bacterial epoxide hydrolase species: Aspergillus niger [TaxId: 5061]
Probab=98.72 E-value=3.9e-08 Score=105.02 Aligned_cols=119 Identities=16% Similarity=0.070 Sum_probs=84.1
Q ss_pred CCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCC------EEEEEecCCCCCCCChhHHhhc
Q psy2521 534 KDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFN------GIYAIPNIRGGGELGEDWHNAG 607 (783)
Q Consensus 534 ~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G------~~v~~~~~RG~g~~G~~~~~~g 607 (783)
-||.+|+...+... .+..|.||++||.++.+.. |...+ ..|++.| |.|+++|+|| ||.+-.
T Consensus 89 i~G~~iHf~h~~~~----~~~~~pLlLlHG~P~s~~~--w~~vi-~~La~~g~~~~~~f~VIaPDLpG---~G~S~~--- 155 (394)
T d1qo7a_ 89 IEGLTIHFAALFSE----REDAVPIALLHGWPGSFVE--FYPIL-QLFREEYTPETLPFHLVVPSLPG---YTFSSG--- 155 (394)
T ss_dssp ETTEEEEEEEECCS----CTTCEEEEEECCSSCCGGG--GHHHH-HHHHHHCCTTTCCEEEEEECCTT---STTSCC---
T ss_pred ECCEEEEEEEEecc----CCCCCEEEEeccccccHHH--HHHHH-HhhccccCCcccceeeecccccc---cCCCCC---
Confidence 48998887655433 3456889999999998865 54444 4455557 9999999999 553211
Q ss_pred cccCCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
........+.++...+..|++.- ..++..+.|+|+||.++..++..+|+...+++...
T Consensus 156 P~~~~~y~~~~~a~~~~~l~~~l--g~~~~~~vg~~~Gg~v~~~~a~~~p~~~~~~~l~~ 213 (394)
T d1qo7a_ 156 PPLDKDFGLMDNARVVDQLMKDL--GFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNL 213 (394)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHT--TCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCccCHHHHHHHHHHHHhhc--cCcceEEEEecCchhHHHHHHHHhhccccceeEee
Confidence 11222345667777777776652 23578899999999999999999999877776654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.72 E-value=1.6e-06 Score=88.45 Aligned_cols=247 Identities=13% Similarity=0.040 Sum_probs=127.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-c-----cccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-L-----KNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
...+++||||++|+.+...+ ..|+++|+++|+.+... . .......++|+||++.++..........
T Consensus 36 ~~~i~~spDg~~l~v~~~~~----~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~---- 107 (337)
T d1pbyb_ 36 PMVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL---- 107 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS----
T ss_pred ccEEEECCCCCEEEEEECCC----CeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCccee----
Confidence 45689999999886654322 46999999999865321 1 1122357899999999988764332100
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCce
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
.........+...+..+.. .......... ...+.+||||++++... .++.++|..++... .
T Consensus 108 ~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~---~~~~~~s~dg~~l~~~~------~~~~~~d~~~~~~~--------~ 168 (337)
T d1pbyb_ 108 THFEVQPTRVALYDAETLS--RRKAFEAPRQ---ITMLAWARDGSKLYGLG------RDLHVMDPEAGTLV--------E 168 (337)
T ss_dssp SCEEECCCEEEEEETTTTE--EEEEEECCSS---CCCEEECTTSSCEEEES------SSEEEEETTTTEEE--------E
T ss_pred eeccccccceeeccccCCe--EEEeccccCC---ceEEEEcCCCCEEEEEc------CCcceeeeecCcEE--------E
Confidence 0001123456666665442 2222222222 24678999999997642 23556676653100 0
Q ss_pred eeecCccceeEEEEeeCCEEE-------------EEECCC-------CCCceEEEEcCCCCCCCCcEEeecCCCCceEEE
Q psy2521 365 TVIPGMDHHHEIIANNGPELI-------------VKTTKN-------APKGKVVTINLNNPCEKNWKTLIPEDENRTLDV 424 (783)
Q Consensus 365 ~l~~~~~~~~~~~s~dg~~l~-------------~~t~~~-------~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~ 424 (783)
.+..........+++++..++ ...... .....+..+++..+.. ......+.. ......
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~ 246 (337)
T d1pbyb_ 169 DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM-AMREVRIMD-VFYFST 246 (337)
T ss_dssp EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE-EEEEEEECS-SCEEEE
T ss_pred EeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcE-EEEEecCCC-cceEEE
Confidence 000000000001112211111 111110 1123466666655431 011222222 222222
Q ss_pred EEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 425 VAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 425 ~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
....++..++ ... ..|.+||+.+++.+..+..+ +.+.++..++|++.+++.. .-.++..||.
T Consensus 247 ~~~~~~~~~~-~~~----~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dG~~l~v~~----~~~~i~v~D~ 308 (337)
T d1pbyb_ 247 AVNPAKTRAF-GAY----NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGG----ALGDLAAYDA 308 (337)
T ss_dssp EECTTSSEEE-EEE----SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEES----BSSEEEEEET
T ss_pred EecccceEEE-Ecc----ccEEEEECCCCcEEEEEcCC-CCEEEEEECCCCCEEEEEe----CCCcEEEEEC
Confidence 2333323333 222 46899999989887777665 2344567789998887642 2357999999
|
| >d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Mammalian carboxylesterase (liver carboxylesterase I) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.68 E-value=9.5e-09 Score=114.63 Aligned_cols=128 Identities=21% Similarity=0.211 Sum_probs=89.4
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCc-cCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc-cccCCcChH
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVS-VLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG-RLLKKQNCF 616 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g-~~~~~~~~~ 616 (783)
+..-|+.|++...+.+.|++|++|||.... ....+... .+++..+.+|+.+|||-|- +| |...+ ....+...+
T Consensus 97 L~LnI~~P~~~~~~~~lPV~v~ihGG~~~~gs~~~~~~~--~~~~~~~vIvVt~nYRLg~-~G--Fl~~~~~~~~gN~Gl 171 (532)
T d2h7ca1 97 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGI-WG--FFSTGDEHSRGNWGH 171 (532)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHH-HH--HCCCSSTTCCCCHHH
T ss_pred CEEEEEECCCCCCCCCcEEEEEEeCCcccccccccCCch--hhhhcCceEEEEEeeccCC-Cc--ccccccccccccccc
Confidence 455567787665677899999999984332 22233332 3445579999999999642 22 11111 112233468
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcch
Q psy2521 617 DDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGALD 671 (783)
Q Consensus 617 ~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~d 671 (783)
.|.+.|++|++++ -.-||++|.|+|+|+||..+...+.. ...||..+|+.+|...
T Consensus 172 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG~~~ 231 (532)
T d2h7ca1 172 LDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVAL 231 (532)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCcceeeeeccccccchHHHHHhhhhccCcchhhhhhccccc
Confidence 9999999999874 23699999999999999999888764 2349999999998654
|
| >d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB esterase) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Thermophilic para-nitrobenzyl esterase (PNB esterase) species: Bacillus subtilis [TaxId: 1423]
Probab=98.68 E-value=8e-09 Score=113.76 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=87.3
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCC---CccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcc-ccCCcC
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYG---VSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGR-LLKKQN 614 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~---~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~-~~~~~~ 614 (783)
+.+-|+.|+. ..++.|++||+|||.. ......+... .++.+.+++|+.+|||-|- +|--...... ...+..
T Consensus 82 L~lni~~P~~--~~~~lPV~v~ihGG~~~~g~~~~~~~~~~--~~~~~~~vVvV~~nYRlg~-~GFl~~~~~~~~~~gN~ 156 (483)
T d1qe3a_ 82 LYVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGS--KLAAQGEVIVVTLNYRLGP-FGFLHLSSFDEAYSDNL 156 (483)
T ss_dssp CEEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCH--HHHHHHTCEEEEECCCCHH-HHSCCCTTTCTTSCSCH
T ss_pred CEEEEEECCC--CCCCCceEEEEeecccccCCccccccccc--cccccCceEEEeecccccc-hhhcccccccccccccc
Confidence 5566667764 3578999999999843 3333333332 3445557999999999642 2210001111 122344
Q ss_pred hHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 615 CFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 615 ~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
.+.|.++|++|+.+. -..||++|.|+|+|+||..+..++... ..||..+|+.+|..
T Consensus 157 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 217 (483)
T d1qe3a_ 157 GLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGAS 217 (483)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCC
T ss_pred ccHHHHHHHHHHHHHHHHcCCCcccceeeccccccchhhhhhcccccCCcceeeccccCCc
Confidence 589999999999775 235999999999999999998887642 24999999999854
|
| >d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase A species: Bacillus subtilis [TaxId: 1423]
Probab=98.67 E-value=2.8e-08 Score=93.53 Aligned_cols=153 Identities=16% Similarity=-0.013 Sum_probs=94.2
Q ss_pred ccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCCC
Q psy2521 555 NPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTKP 634 (783)
Q Consensus 555 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d~ 634 (783)
.| ||++||..+.... |.. +...|.++||.++.++.+|.+.....- ....+++...++.++++ ...
T Consensus 3 ~P-Vv~vHG~~~~~~~--~~~-l~~~l~~~g~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~i~~~~~~--~~~ 67 (179)
T d1ispa_ 3 NP-VVMVHGIGGASFN--FAG-IKSYLVSQGWSRDKLYAVDFWDKTGTN---------YNNGPVLSRFVQKVLDE--TGA 67 (179)
T ss_dssp CC-EEEECCTTCCGGG--GHH-HHHHHHHTTCCGGGEEECCCSCTTCCH---------HHHHHHHHHHHHHHHHH--HCC
T ss_pred CC-EEEECCCCCCHHH--HHH-HHHHHHHcCCeEEEEecCCcccccccc---------chhhhhHHHHHHHHHHh--cCC
Confidence 35 5668998665433 433 446666789999888888844332111 11234566666666554 234
Q ss_pred CcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcchhhhcccccccccchhhhCCCCCHHHHHHHHhcCcccCCCCC
Q psy2521 635 KYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALDMLRFNKFTIAYYSESEFGSPNNKTHFHNLLSYSPLHNIKVP 712 (783)
Q Consensus 635 ~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~sp~~~v~~~ 712 (783)
+++.|+||||||.++..++.++ |+..+.+|+..+....... . .+.....+
T Consensus 68 ~~v~lvGHSmGG~va~~~~~~~~~~~~V~~~V~l~~p~~g~~~------~----------------------~l~~~~~~ 119 (179)
T d1ispa_ 68 KKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------K----------------------ALPGTDPN 119 (179)
T ss_dssp SCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------B----------------------CCCCSCTT
T ss_pred ceEEEEeecCcCHHHHHHHHHcCCchhhCEEEEECCCCCCchh------h----------------------hcCCcccc
Confidence 6899999999999999988765 6678888876653221110 0 00011111
Q ss_pred CCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCccC
Q psy2521 713 PNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHGQ 770 (783)
Q Consensus 713 ~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg~ 770 (783)
...| ++.++|..|..|++..+. +. +. .....++.||..
T Consensus 120 ---~~~~-~~~i~~~~D~~v~~~~~~-----l~---------~~--~~~~~~~~~H~~ 157 (179)
T d1ispa_ 120 ---QKIL-YTSIYSSADMIVMNYLSR-----LD---------GA--RNVQIHGVGHIG 157 (179)
T ss_dssp ---CCCE-EEEEEETTCSSSCHHHHC-----CB---------TS--EEEEESSCCTGG
T ss_pred ---cCce-EEEEEecCCcccCchhhc-----CC---------Cc--eEEEECCCCchh
Confidence 2344 899999999999986541 21 11 335568899964
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.67 E-value=5.9e-06 Score=85.09 Aligned_cols=233 Identities=12% Similarity=0.004 Sum_probs=135.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-ccc--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVL--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|||||++|+.+.. + ..|++||+....... ... .........|+||+..++....
T Consensus 99 ~I~~v~~s~dg~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------------ 161 (337)
T d1gxra_ 99 YIRSCKLLPDGCTLIVGGE-A----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS------------ 161 (337)
T ss_dssp BEEEEEECTTSSEEEEEES-S----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET------------
T ss_pred cEEEEEEcCCCCEEEEeec-c----ccccccccccccccccccccccccccccccccccccccccccc------------
Confidence 4788999999999876543 2 469999987654221 111 1112246789999987765542
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
...+..+++.+.. ........ ......+.++++++.++....+ ..+.++|+.++. . .. .
T Consensus 162 ----d~~i~~~~~~~~~--~~~~~~~~--~~~v~~l~~s~~~~~~~~~~~d----~~v~i~d~~~~~--~------~~-~ 220 (337)
T d1gxra_ 162 ----DGNIAVWDLHNQT--LVRQFQGH--TDGASCIDISNDGTKLWTGGLD----NTVRSWDLREGR--Q------LQ-Q 220 (337)
T ss_dssp ----TSCEEEEETTTTE--EEEEECCC--SSCEEEEEECTTSSEEEEEETT----SEEEEEETTTTE--E------EE-E
T ss_pred ----ccccccccccccc--cccccccc--cccccccccccccccccccccc----ccccccccccce--e------ec-c
Confidence 2257777776542 11222211 2234578899999998875432 578999998731 0 11 1
Q ss_pred ecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEE
Q psy2521 367 IPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVM 445 (783)
Q Consensus 367 ~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l 445 (783)
......-.. .|+|+++.|+..+.. +.+..+|+.++. ......+ ...+..+.+..++.++++...++ .|
T Consensus 221 ~~~~~~i~~l~~~~~~~~l~~~~~d----~~i~i~d~~~~~---~~~~~~~--~~~i~~v~~s~~g~~l~s~s~Dg--~i 289 (337)
T d1gxra_ 221 HDFTSQIFSLGYCPTGEWLAVGMES----SNVEVLHVNKPD---KYQLHLH--ESCVLSLKFAYCGKWFVSTGKDN--LL 289 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETT----SCEEEEETTSSC---EEEECCC--SSCEEEEEECTTSSEEEEEETTS--EE
T ss_pred cccccceEEEEEcccccccceeccc----cccccccccccc---ccccccc--ccccceEEECCCCCEEEEEeCCC--eE
Confidence 111111122 478888887765442 457888887654 2222222 23344444443355666666664 58
Q ss_pred EEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 446 DLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 446 ~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+||+.+|+.+..+.. .+.|..+.+++++..++ +. +.. ..+..||+
T Consensus 290 ~iwd~~~~~~~~~~~~-~~~v~~~~~s~d~~~l~-t~-s~D--~~I~vWdl 335 (337)
T d1gxra_ 290 NAWRTPYGASIFQSKE-SSSVLSCDISVDDKYIV-TG-SGD--KKATVYEV 335 (337)
T ss_dssp EEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEE-EE-ETT--SCEEEEEE
T ss_pred EEEECCCCCEEEEccC-CCCEEEEEEeCCCCEEE-EE-eCC--CeEEEEEE
Confidence 8999988887655543 35566777788876554 22 222 35666664
|
| >d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Triacylglycerol lipase species: Yeast (Candida antarctica), form b [TaxId: 34362]
Probab=98.66 E-value=1.3e-07 Score=96.54 Aligned_cols=103 Identities=12% Similarity=-0.021 Sum_probs=72.2
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
..+.| ||++||.........|. .+..+|.++||.|+.+|++|.| .. ..+...+++.+.++++.+.
T Consensus 29 ~~~~P-VvlvHG~~~~~~~~~~~-~~~~~L~~~Gy~v~~~d~~g~g---~~--------d~~~sae~la~~i~~v~~~-- 93 (317)
T d1tcaa_ 29 SVSKP-ILLVPGTGTTGPQSFDS-NWIPLSTQLGYTPCWISPPPFM---LN--------DTQVNTEYMVNAITALYAG-- 93 (317)
T ss_dssp SCSSE-EEEECCTTCCHHHHHTT-THHHHHHTTTCEEEEECCTTTT---CS--------CHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCc-EEEECCCCCCCcchhHH-HHHHHHHhCCCeEEEecCCCCC---CC--------chHhHHHHHHHHHHHHHHh--
Confidence 34456 56789965443322232 3456777789999999999843 21 1123356788888988776
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCC---ceeEEEEcCCc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPE---LYGAALILVGA 669 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~---lf~a~i~~~~~ 669 (783)
+..+||.|+|||+||+++.+++.++|+ ....+|...|-
T Consensus 94 ~g~~kV~lVGhS~GG~~a~~~l~~~p~~~~~V~~~v~i~~~ 134 (317)
T d1tcaa_ 94 SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred ccCCceEEEEeCchHHHHHHHHHHCCCcchheeEEEEeCCC
Confidence 334689999999999999999999885 46777777664
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.66 E-value=6e-06 Score=83.95 Aligned_cols=242 Identities=8% Similarity=0.016 Sum_probs=128.1
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCC------C-
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDIN------G- 279 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~------~- 279 (783)
.-.+..++|||||++||-+.. ...|+|||+.+++.+... ........++|+||++.|+....+..- .
T Consensus 55 ~~~I~~l~~s~~~~~l~sgs~-----Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~ 129 (340)
T d1tbga_ 55 LAKIYAMHWGTDSRLLVSASQ-----DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTR 129 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSS
T ss_pred CCCEEEEEECCCCCEEEEEEC-----CCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeeccccccc
Confidence 344788999999999885542 246999999999865422 122223588999999988876633210 0
Q ss_pred CCCCCccc--c--cCCceE------------------EEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 280 TADGTETT--A--HMGQKI------------------YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 280 ~~~g~~~~--~--~~~~~v------------------~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
........ . ...... ........ ......... ........+.+++..++...
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 203 (340)
T d1tbga_ 130 EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG---QQTTTFTGH-TGDVMSLSLAPDTRLFVSGA-- 203 (340)
T ss_dssp CSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTT---EEEEEEECC-SSCEEEEEECTTSSEEEEEE--
T ss_pred ccccccceecccccccccccccccccccccccccccccccccccc---ccccccccc-ceeEeeeccccccceeEEee--
Confidence 00000000 0 000000 00000000 000000000 01123345566666655322
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP 415 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~ 415 (783)
....+.++|+.++. ....+.+..... . .|+|+|+.|+..+. .+.|..+++.... ....+..
T Consensus 204 --~d~~v~i~d~~~~~---------~~~~~~~h~~~i~~v~~~p~~~~l~s~s~----d~~i~~~~~~~~~--~~~~~~~ 266 (340)
T d1tbga_ 204 --CDASAKLWDVREGM---------CRQTFTGHESDINAICFFPNGNAFATGSD----DATCRLFDLRADQ--ELMTYSH 266 (340)
T ss_dssp --TTTEEEEEETTTTE---------EEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE--EEEEECC
T ss_pred --cCceEEEEECCCCc---------EEEEEeCCCCCeEEEEECCCCCEEEEEeC----CCeEEEEeecccc--ccccccc
Confidence 22578888987731 111122222222 2 48899887776443 2357778876543 1122212
Q ss_pred CCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 416 EDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 416 ~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
......+..+.+..++.++++...++ .|++||+.+++.+..+....+.|..+.+++++..++
T Consensus 267 ~~~~~~i~~~~~s~~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~ 328 (340)
T d1tbga_ 267 DNIICGITSVSFSKSGRLLLAGYDDF--NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp TTCCSCEEEEEECSSSCEEEEEETTS--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCC--EEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEE
Confidence 22223344454444456666666664 588999988988887876666787888888876554
|
| >d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.65 E-value=9e-09 Score=115.10 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=86.6
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCC---CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcCh
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~---~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~ 615 (783)
+.+-|+.|+. ....+.|++||+|||. |....+.+... .+.++.+++|+.+|||-|- +|--.........+...
T Consensus 97 L~LnI~~P~~-~~~~~lPV~v~ihGG~~~~gs~~~~~~~~~--~~~~~~~vvvVt~nYRlg~-~Gfl~~~~~~~~~gN~G 172 (542)
T d2ha2a1 97 LYLNVWTPYP-RPASPTPVLIWIYGGGFYSGAASLDVYDGR--FLAQVEGAVLVSMNYRVGT-FGFLALPGSREAPGNVG 172 (542)
T ss_dssp CEEEEEEESS-CCSSCEEEEEEECCSTTTCCCTTSGGGCTH--HHHHHHCCEEEEECCCCHH-HHHCCCTTCSSCCSCHH
T ss_pred CEEEEEecCC-CCCCCCcEEEEEEECccccccCcccccCch--hhhhhccceeEeeeeeccc-eeeecccccccCCCcCC
Confidence 3445556664 2356789999999983 33444444443 2334469999999999532 22000011111233446
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 616 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 616 ~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
+.|++.|++|+.++ ---||++|.|+|+|+||..+..++... ..+|..+|+.+|..
T Consensus 173 l~Dq~~AL~WV~~nI~~FGGDP~~VTi~G~SAGa~sv~~ll~sp~~~~LF~~aI~~SG~~ 232 (542)
T d2ha2a1 173 LLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (542)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred cccHHHHHHHHHHHHHHhhcCccccccccccccccchhhhhhhhhhhHHhhhheeecccc
Confidence 89999999999874 235999999999999999999887652 14999999998854
|
| >d2pl5a1 c.69.1.40 (A:5-366) Homoserine O-acetyltransferase {Leptospira interrogans [TaxId: 173]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Homoserine O-acetyltransferase species: Leptospira interrogans [TaxId: 173]
Probab=98.64 E-value=4.3e-07 Score=94.32 Aligned_cols=134 Identities=15% Similarity=0.138 Sum_probs=81.4
Q ss_pred ECCCCcEEE-EEEEEec-CcCCCCCccEEEEecCCCCCccC----------CcCcHH---HHHHHHcCCEEEEEecCCCC
Q psy2521 532 RSKDGTRVP-MYIIHRV-GALRNRRNPVIIYGYGGYGVSVL----------PTFSIS---RCMFLRHFNGIYAIPNIRGG 596 (783)
Q Consensus 532 ~s~dg~~v~-~~~~~p~-~~~~~~~~P~ll~~hGg~~~~~~----------~~~~~~---~~~~l~~~G~~v~~~~~RG~ 596 (783)
+-..|..++ +.|.+.- +.....+.++||+.|+-.|.+.. +.|-.. -...++-.-|-|+++|.-|+
T Consensus 17 ~le~G~~l~~~~l~Y~t~G~ln~~~~NaVlv~h~~tG~~~~~g~~~~~~~~~gww~~liG~g~~lDt~~yfVI~~n~lG~ 96 (362)
T d2pl5a1 17 ILNNGSVLSPVVIAYETYGTLSSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGG 96 (362)
T ss_dssp ECTTSCEESSEEEEEEEEECCCTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTC
T ss_pred ecCCCCCcCCceEEEEeeeccCCCCCCEEEECCCCCcchhccccCCccCCCcchHHHhcCCCCccCccccEEEeeccccC
Confidence 334566554 4444431 11113456899999986555322 222111 01223444599999999986
Q ss_pred CCCChhHHhhcc--------ccCCcChHHHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhcCCCceeEEEEcC
Q psy2521 597 GELGEDWHNAGR--------LLKKQNCFDDFQAAAEYMINKKYTKPKYIT-IMGGSNGGLLVGACLNQRPELYGAALILV 667 (783)
Q Consensus 597 g~~G~~~~~~g~--------~~~~~~~~~D~~a~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~lf~a~i~~~ 667 (783)
+ +|..-..... ...-.-++.|++++-.-|.+.-.+ +|+. |+|+||||+.++..+.++|+....+|+.+
T Consensus 97 ~-~~ss~~~s~~p~~~~~yg~~fP~~t~~D~v~~~~~ll~~LGI--~~l~~viG~SmGGmqAl~wA~~yPd~v~~~v~ia 173 (362)
T d2pl5a1 97 C-KGSSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVESLGI--EKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMA 173 (362)
T ss_dssp S-SSSSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHHTTC--SSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEES
T ss_pred c-ccccCccccccccccccCcCCccchhHHHHHHHHHHHHHhCc--CeeEEEeehhHHHHHHHHHHHhCchHhhhhcccc
Confidence 5 3321111000 012235688988888777765333 3554 88999999999999999999999998887
Q ss_pred C
Q psy2521 668 G 668 (783)
Q Consensus 668 ~ 668 (783)
+
T Consensus 174 ~ 174 (362)
T d2pl5a1 174 S 174 (362)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >d2vata1 c.69.1.40 (A:7-382) Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG {Acremonium chrysogenum [TaxId: 5044]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: O-acetyltransferase domain: Acetyl-CoA:deacetylcephalosporin C acetyltransferase CefG species: Acremonium chrysogenum [TaxId: 5044]
Probab=98.64 E-value=1.9e-07 Score=97.62 Aligned_cols=135 Identities=12% Similarity=0.084 Sum_probs=87.1
Q ss_pred EECCCCcEEE-EEEEEec-CcCCCCCccEEEEecCCCCCccCCcCcHHH---HHHHHcCCEEEEEecCCCCCCCChhHHh
Q psy2521 531 FRSKDGTRVP-MYIIHRV-GALRNRRNPVIIYGYGGYGVSVLPTFSISR---CMFLRHFNGIYAIPNIRGGGELGEDWHN 605 (783)
Q Consensus 531 ~~s~dg~~v~-~~~~~p~-~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~---~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 605 (783)
|+...|..++ +.|.+.- +.....+.++||+.|+-.+.+...+|-..+ ...++-.-|-|+++|+-|++ +|..-..
T Consensus 18 F~le~G~~l~~~~laY~t~G~ln~~~~NaVlv~h~ltg~~~~~~WW~~liG~g~alDt~kyfVI~~n~lG~~-~gst~p~ 96 (376)
T d2vata1 18 FTLESGVILRDVPVAYKSWGRMNVSRDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSP-FGSAGPC 96 (376)
T ss_dssp EECTTSCEEEEEEEEEEEESCCCTTSCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCS-SSSSSTT
T ss_pred EEeCCCCCcCCceEEEEeecccCCCCCCEEEEcCCCcCCccccccHHHhCCCCCccCccceEEEEeccCCCC-cCCCCCC
Confidence 4556677774 5554432 211235678999999977766544432111 13344457999999999865 3321111
Q ss_pred hc------c----ccCCcChHHHHHHHHHHHHHcCCCCCCcE-EEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 606 AG------R----LLKKQNCFDDFQAAAEYMINKKYTKPKYI-TIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 606 ~g------~----~~~~~~~~~D~~a~~~~l~~~~~~d~~ri-~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
.. . ...-.-++.|.+.+-.-|++.- .-+|+ +|+|+||||+.++..+.++|++...+|+.++
T Consensus 97 s~~p~~~~~~~yg~~FP~~ti~D~v~aq~~ll~~L--GI~~l~aViG~SmGGmqal~wa~~~Pd~v~~li~Ia~ 168 (376)
T d2vata1 97 SPDPDAEGQRPYGAKFPRTTIRDDVRIHRQVLDRL--GVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIAT 168 (376)
T ss_dssp SBCTTTC--CBCGGGCCCCCHHHHHHHHHHHHHHH--TCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESC
T ss_pred CCCcccccCCcccccCCcchhHHHHHHHHHHHHHh--CcceEEEeecccHHHHHHHHHHHhchHHHhhhccccc
Confidence 00 0 1122356889999877776652 23466 7999999999999999999999988887765
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.64 E-value=3.6e-06 Score=90.12 Aligned_cols=115 Identities=10% Similarity=0.038 Sum_probs=66.7
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc---cc--ccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK---NV--KFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~---~~--~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
+.+++|||||++|+.+ +.+ ..++++|++|++.... .+. +. ...++.|||||++++.....+
T Consensus 64 ~~~vafSPDGk~l~~~-~~d----~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~-------- 130 (426)
T d1hzua2 64 VHISRMSASGRYLLVI-GRD----ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP-------- 130 (426)
T ss_dssp EEEEEECTTSCEEEEE-ETT----SEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEES--------
T ss_pred eeEEEECCCCCEEEEE-eCC----CCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCC--------
Confidence 6789999999998644 433 3699999999975321 111 11 113567789999988766432
Q ss_pred cccccCCceEEEEEcCCCCCCce----------eEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCC
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDI----------PVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHS 351 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~----------~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~ 351 (783)
..+.+++..+...... ..+. ++ . ....+..|+|++.+++.... ...+.+++...
T Consensus 131 -------~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~-~-~~~~i~~s~d~~~~~~~~~~---~~~i~~~~~~~ 194 (426)
T d1hzua2 131 -------PQFAIMDGETLEPKQIVSTRGMTVDTQTYH-PE-P-RVAAIIASHEHPEFIVNVKE---TGKVLLVNYKD 194 (426)
T ss_dssp -------SEEEEEETTTCCEEEEEECCEECSSSCCEE-SC-C-CEEEEEECSSSSEEEEEETT---TTEEEEEECSS
T ss_pred -------CeEEEEcCCccceeEEeeccCCCccceeec-CC-C-ceeEEEECCCCCEEEEecCC---CCeEEEEEecc
Confidence 2455555544321100 0111 11 1 12456778899888765432 35677777655
|
| >d1thga_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Fungal lipases domain: Type-B carboxylesterase/lipase species: Fungus (Geotrichum candidum), ATCC 34614 [TaxId: 27317]
Probab=98.63 E-value=3e-08 Score=110.74 Aligned_cols=127 Identities=18% Similarity=0.245 Sum_probs=87.0
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCCCCcc-CCcCcH--HHH-HHHHcCCEEEEEecCCCCCCCC----hhHHhhcccc
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGYGVSV-LPTFSI--SRC-MFLRHFNGIYAIPNIRGGGELG----EDWHNAGRLL 610 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~--~~~-~~l~~~G~~v~~~~~RG~g~~G----~~~~~~g~~~ 610 (783)
+..-|+.|++...+.+.|++||+|||.-... ...+.. ... .+.+..+++|+.+|||-|- +| .+... ..
T Consensus 106 L~LnI~~P~~~~~~~~lPV~V~ihGG~f~~G~~~~~~~~~~~~~~~~~~~~vIvVt~nYRlg~-~Gfl~~~~~~~---~~ 181 (544)
T d1thga_ 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAITA---EG 181 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHH---HT
T ss_pred CEEEEEECCCCCCCCCCCEEEEeccCCCccCCCccCCcchhhhhhhhccCCeEEEeccccccc-ccccCCchhhc---cc
Confidence 4556667877666778999999999843321 122222 122 3334568999999999532 22 11111 11
Q ss_pred CCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--------CCceeEEEEcCCc
Q psy2521 611 KKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--------PELYGAALILVGA 669 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~lf~a~i~~~~~ 669 (783)
.+...+.|.+.|++|+.++ -.-||++|.|+|+|+||..+..++... ..||+.+|+.+|.
T Consensus 182 ~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SaGa~~v~~~l~sp~~~~~~~s~gLF~raI~qSG~ 251 (544)
T d1thga_ 182 NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGG 251 (544)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCC
T ss_pred cccHHHHHhhhhhhhhhhhhcccccCCCceEeeeeccchHHHHHHHhCcCCCcccchhhhhccccccccc
Confidence 2344688999999999875 236999999999999999998887531 1499999999984
|
| >d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray (Torpedo californica) [TaxId: 7787]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Pacific electric ray (Torpedo californica) [TaxId: 7787]
Probab=98.60 E-value=1.3e-08 Score=113.53 Aligned_cols=127 Identities=21% Similarity=0.261 Sum_probs=86.5
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCC---CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcCh
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~---~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~ 615 (783)
+..-|+.|+. ...+.|++||+|||. |....+.+... .++++.+.+|+.+|||-|- +|--.........+...
T Consensus 92 L~LnI~~P~~--~~~~lPV~v~ihGG~~~~g~~~~~~~~~~--~~~~~~~vvvVt~nYRlg~-~GFl~~~~~~~~~gN~G 166 (532)
T d1ea5a_ 92 LYLNIWVPSP--RPKSTTVMVWIYGGGFYSGSSTLDVYNGK--YLAYTEEVVLVSLSYRVGA-FGFLALHGSQEAPGNVG 166 (532)
T ss_dssp CEEEEEECSS--CCSSEEEEEEECCSTTTCCCTTCGGGCTH--HHHHHHTCEEEECCCCCHH-HHHCCCTTCSSSCSCHH
T ss_pred CEEEEEeCCC--CCCCCcEEEEEEcCCcccccCCccccCcc--hhhcccCccEEEEeecccc-ccccccccccCCCCccc
Confidence 3444556764 245789999999983 33344444443 3344569999999999632 22100111111233446
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcc
Q psy2521 616 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGAL 670 (783)
Q Consensus 616 ~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~ 670 (783)
+.|.+.|++|+.++ ---||++|.|+|+|+||..+..++... ..+|..+|+.+|..
T Consensus 167 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lF~~aI~~Sg~~ 226 (532)
T d1ea5a_ 167 LLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 226 (532)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred chhHHHHHHHHHHHHHhhcCCccceEeeeecccccchhhhccCccchhhhhhheeecccc
Confidence 89999999999875 236999999999999999998887641 24999999988754
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.59 E-value=5.2e-07 Score=93.50 Aligned_cols=127 Identities=11% Similarity=-0.001 Sum_probs=78.4
Q ss_pred EECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceE
Q psy2521 215 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294 (783)
Q Consensus 215 ~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v 294 (783)
++||||+++++.....+.-..++|++|+++|+.+.. +......+++|||||+.||......... ....+...|
T Consensus 8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~-~~~g~~~~~a~SpDg~~l~v~~~~~~~~------~~g~~d~~v 80 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGM-IDGGFLPNPVVADDGSFIAHASTVFSRI------ARGERTDYV 80 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEE-EEECSSCEEEECTTSSCEEEEEEEEEET------TEEEEEEEE
T ss_pred eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEE-EECCCCCceEEcCCCCEEEEEeCCCccc------cccCCCCEE
Confidence 579999999655444445557899999999987653 3222335789999999998876332100 001123467
Q ss_pred EEEEcCCCCCCceeEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 295 YYHVLGTEQDKDIPVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 295 ~~~~lgt~~~~d~~v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
+++++.+...... + ..+..... -..+.+||||+++++.... ....+++++..++
T Consensus 81 ~v~D~~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--~~~~~~~~~~~~~ 139 (355)
T d2bbkh_ 81 EVFDPVTLLPTAD-I-ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PAPAVGVVDLEGK 139 (355)
T ss_dssp EEECTTTCCEEEE-E-EETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SSCEEEEEETTTT
T ss_pred EEEECCCCCEEEE-E-ecCCcceeecCCCCceEEEecCCCeeEEecCC--CCceeeeeecCCC
Confidence 7888776532221 1 11111111 1246899999999876432 3367888888774
|
| >d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Butyryl cholinesterase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=2.7e-08 Score=110.67 Aligned_cols=127 Identities=23% Similarity=0.243 Sum_probs=85.1
Q ss_pred EEEEEEEecCcCCCCCccEEEEecCCC---CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcCh
Q psy2521 539 VPMYIIHRVGALRNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNC 615 (783)
Q Consensus 539 v~~~~~~p~~~~~~~~~P~ll~~hGg~---~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~ 615 (783)
+..-|+.|.. ..++.|++||+|||. |....+.+... .+.++.+++|+.+|||-|- +|---........+...
T Consensus 90 L~lnI~~P~~--~~~~~PV~v~ihGG~~~~gs~~~~~~~~~--~~~~~~~vVvVt~nYRlg~-~Gfl~~~~~~~~~gN~G 164 (526)
T d1p0ia_ 90 LYLNVWIPAP--KPKNATVLIWIYGGGFQTGTSSLHVYDGK--FLARVERVIVVSMNYRVGA-LGFLALPGNPEAPGNMG 164 (526)
T ss_dssp CEEEEEEESS--CCSSEEEEEEECCSTTTSCCTTCGGGCTH--HHHHHHCCEEEEECCCCHH-HHHCCCTTCTTSCSCHH
T ss_pred CEEEEEeCCC--CCCCCceEEEEECCCcccccCcccccCcc--ccccccceeEEeccccccc-ccccCCCCccccccccc
Confidence 4455566764 246789999999984 33333344443 2334469999999999641 11000001112233446
Q ss_pred HHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcc
Q psy2521 616 FDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGAL 670 (783)
Q Consensus 616 ~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~ 670 (783)
+.|.+.|++|++++ ---||+||.|+|+|+||..+..++.. ...+|..+|+.++-.
T Consensus 165 l~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~~~sp~~~~lf~~aI~~Sg~~ 224 (526)
T d1p0ia_ 165 LFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 224 (526)
T ss_dssp HHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred ccchhhhhhhHHHHHHHhhcCchheeehhhccccceeeccccCCcchhhhhhhhcccccc
Confidence 89999999999774 23699999999999999999877753 224999999988754
|
| >d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Acetylcholinesterase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.55 E-value=5.6e-08 Score=109.18 Aligned_cols=116 Identities=22% Similarity=0.282 Sum_probs=82.2
Q ss_pred CCCCccEEEEecCCC---CCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHH--------hhccccCCcChHHHH
Q psy2521 551 RNRRNPVIIYGYGGY---GVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWH--------NAGRLLKKQNCFDDF 619 (783)
Q Consensus 551 ~~~~~P~ll~~hGg~---~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~--------~~g~~~~~~~~~~D~ 619 (783)
..++.|++||+|||. |....+.|.... +.++.+.+|+.+|||-|- +| |. .......+...+.|.
T Consensus 135 ~~~~lPV~V~ihGG~f~~Gs~~~~~~~~~~--l~~~~~vVvVtinYRlg~-fG--Fl~~~~~~~~~~~~~~~gN~Gl~Dq 209 (571)
T d1dx4a_ 135 TTNGLPILIWIYGGGFMTGSATLDIYNADI--MAAVGNVIVASFQYRVGA-FG--FLHLAPEMPSEFAEEAPGNVGLWDQ 209 (571)
T ss_dssp CCSSEEEEEEECCSTTTCCCTTCGGGCCHH--HHHHHTCEEEEECCCCTH-HH--HCCCGGGSCGGGTTSSCSCHHHHHH
T ss_pred CCCCCeEEEEEeCCCccCCCCcccccchhh--hhhcCCeeEEeecceecc-cc--ccccccccccccccCCCCcccchHH
Confidence 357899999999983 444445565543 333446999999999642 22 11 001122334568999
Q ss_pred HHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhcC--CCceeEEEEcCCcch
Q psy2521 620 QAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQR--PELYGAALILVGALD 671 (783)
Q Consensus 620 ~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~lf~a~i~~~~~~d 671 (783)
+.|++|+.++ ---||+||.|+|+|+||..+...+... ..+|+.+|+.+|...
T Consensus 210 ~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~ll~sp~~~~lf~~aI~~Sg~~~ 266 (571)
T d1dx4a_ 210 ALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTMN 266 (571)
T ss_dssp HHHHHHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCTT
T ss_pred HHHHHHHHHhhhhhccCCCceEeccccCccceeeeeeccccccccccccceeccccc
Confidence 9999999875 235999999999999999998887642 249999999988654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.50 E-value=3e-06 Score=91.18 Aligned_cols=197 Identities=13% Similarity=0.059 Sum_probs=108.3
Q ss_pred EEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCC
Q psy2521 235 NTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPN 314 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~ 314 (783)
.+|.|+|++|++.+.....+....+++|||||++||.... ...+.++++.+.... .+.+.+.
T Consensus 42 g~v~v~D~~t~~v~~~~~~g~~~~~v~fSpDG~~l~~~s~----------------dg~v~~~d~~t~~~~--~~~~i~~ 103 (432)
T d1qksa2 42 GQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGR----------------DGKVNMIDLWMKEPT--TVAEIKI 103 (432)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET----------------TSEEEEEETTSSSCC--EEEEEEC
T ss_pred CEEEEEECCCCcEEEEEeCCCCeeEEEECCCCCEEEEEcC----------------CCCEEEEEeeCCCce--EEEEEec
Confidence 3599999999998764333333468999999999975541 236888888775433 2222111
Q ss_pred --CC-eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC----CCceeeecCccceeE-EEEeeCCEEEE
Q psy2521 315 --GR-SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK----FPLKTVIPGMDHHHE-IIANNGPELIV 386 (783)
Q Consensus 315 --~~-~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~----~~~~~l~~~~~~~~~-~~s~dg~~l~~ 386 (783)
++ ....++.+||||++|+..... ...+.++|.+++........ ..... ......... .+++||..+++
T Consensus 104 ~~~~~~~~~s~~~SpDG~~l~vs~~~---~~~v~i~d~~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~s~dg~~~~v 179 (432)
T d1qksa2 104 GSEARSIETSKMEGWEDKYAIAGAYW---PPQYVIMDGETLEPKKIQSTRGMTYDEQE-YHPEPRVAAILASHYRPEFIV 179 (432)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEE---TTEEEEEETTTCCEEEEEECCEECTTTCC-EESCCCEEEEEECSSSSEEEE
T ss_pred CCCCCCeEEecccCCCCCEEEEEcCC---CCeEEEEeCccccceeeeccCCcccccee-ccCCCceeEEEECCCCCEEEE
Confidence 11 223355678999999876543 36899999987421100000 00000 001111111 47888888776
Q ss_pred EECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeec
Q psy2521 387 KTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP 460 (783)
Q Consensus 387 ~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~ 460 (783)
.... ...+..++......... .-++.+ .........++|+++++..... ..+.+++..+++.+..+.
T Consensus 180 s~~~---~~~i~~~d~~~~~~~~~-~~i~~g-~~~~~~~~spdg~~~~va~~~~--~~v~v~d~~~~~~~~~~~ 246 (432)
T d1qksa2 180 NVKE---TGKILLVDYTDLNNLKT-TEISAE-RFLHDGGLDGSHRYFITAANAR--NKLVVIDTKEGKLVAIED 246 (432)
T ss_dssp EETT---TTEEEEEETTCSSEEEE-EEEECC-SSEEEEEECTTSCEEEEEEGGG--TEEEEEETTTTEEEEEEE
T ss_pred EEcc---CCeEEEEEccCCCcceE-EEEccc-CccccceECCCCCEEEEecccc--ceEEEeecccceEEEEec
Confidence 5443 34688888766441111 122332 2222233444444555554433 468888887666554443
|
| >d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId: 42739]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Chromobacterium viscosum [TaxId: 42739]
Probab=98.49 E-value=1.7e-07 Score=96.76 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=73.2
Q ss_pred CCCccEEEEecCCCCCccCC----cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVLP----TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMI 627 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~----~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~ 627 (783)
..++|+| ++||.++..... .|.. +...|+++||.|+++|+||.|... ......+++.+.++.++
T Consensus 6 ~~k~Pvv-lvHG~~g~~~~~~~~~~~~~-~~~~L~~~G~~V~~~~~~g~g~s~----------~~~~~~~~l~~~i~~~~ 73 (319)
T d1cvla_ 6 ATRYPVI-LVHGLAGTDKFANVVDYWYG-IQSDLQSHGAKVYVANLSGFQSDD----------GPNGRGEQLLAYVKQVL 73 (319)
T ss_dssp CCSSCEE-EECCTTBSSEETTTEESSTT-HHHHHHHTTCCEEECCCBCSSCTT----------STTSHHHHHHHHHHHHH
T ss_pred CCCCCEE-EECCCCCCcchhhhhhhHHH-HHHHHHHCCCEEEEecCCCCCCCC----------CCcccHHHHHHHHHHHH
Confidence 3467865 579977654321 2433 445667789999999999844211 11123456767666666
Q ss_pred HcCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 628 NKKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 628 ~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+. .+.++|.|+|||+||+++..++.++|++++.+|..++
T Consensus 74 ~~--~~~~~v~lvGhS~GG~~~~~~~~~~p~~v~~vv~i~~ 112 (319)
T d1cvla_ 74 AA--TGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGT 112 (319)
T ss_dssp HH--HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred HH--hCCCCEEEEeccccHHHHHHHHHHCccccceEEEECC
Confidence 54 3457999999999999999999999999999988765
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.47 E-value=8.1e-06 Score=83.75 Aligned_cols=212 Identities=8% Similarity=0.086 Sum_probs=117.7
Q ss_pred EEEeeEEECC--CCcEEEEEEecCCCceEEEEEEECCCCccccccc---------cccccCeeEEeeCCCEEEEEEeecC
Q psy2521 209 TALKLYAFSD--NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL---------KNVKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 209 ~~l~~~~~SP--DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~---------~~~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
..+..++||| ||++||-+ +. ..+|++||+..++...... .......++|+|||+.|+....+.
T Consensus 64 ~~v~~v~fsP~~~g~~lasg-s~----Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~- 137 (325)
T d1pgua1 64 SVVTTVKFSPIKGSQYLCSG-DE----SGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR- 137 (325)
T ss_dssp SCEEEEEECSSTTCCEEEEE-ET----TSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS-
T ss_pred CCEEEEEEeeCCCCCEEEEE-eC----CCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccc-
Confidence 3477899998 66777643 22 2469999987765432110 111224789999999998876321
Q ss_pred CCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcc
Q psy2521 278 NGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKI 357 (783)
Q Consensus 278 ~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l 357 (783)
...+..+.+.+.. .+............+.|+|+++++++.... ...+.++|+..+.
T Consensus 138 -------------~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~---d~~v~~~d~~~~~---- 193 (325)
T d1pgua1 138 -------------DNFGVFISWDSGN----SLGEVSGHSQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFK---- 193 (325)
T ss_dssp -------------SCSEEEEETTTCC----EEEECCSCSSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBE----
T ss_pred -------------cceEEEEeecccc----cceeeeecccccccccccccccceEEEeec---ccccccccccccc----
Confidence 2234455554432 222222222344678999999987776543 2577888876521
Q ss_pred cCCCCceeee--cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC--ceEEEEEEeeCC
Q psy2521 358 SGKFPLKTVI--PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN--RTLDVVAAVANN 431 (783)
Q Consensus 358 ~~~~~~~~l~--~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~--~~l~~~~~~~g~ 431 (783)
. ..... ...... .. .|+||+..+++....+ +.|..+|+.++. ....+-.+... ...-...+.+ +
T Consensus 194 ---~-~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d---~~i~iwd~~~~~--~~~~l~~~~~~v~~~~~s~~~~d-g 263 (325)
T d1pgua1 194 ---F-SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD---RKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWLD-S 263 (325)
T ss_dssp ---E-EEEECSSSCTTCCEEEEEECSTTCCEEEEEETT---CCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEESS-S
T ss_pred ---c-ceecccccCCCCccEEeeeccccceeccccccc---cceeeeeecccc--ccccccccccccccceeeeeccC-C
Confidence 0 01111 111111 22 4889866666554432 358888887654 12233222211 1122233355 4
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeeecCC
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD 462 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 462 (783)
.++++...|+ .|.+||+.+|+.++.+...
T Consensus 264 ~~l~s~s~D~--~i~iwd~~~~~~~~~~~~~ 292 (325)
T d1pgua1 264 QKFATVGADA--TIRVWDVTTSKCVQKWTLD 292 (325)
T ss_dssp SEEEEEETTS--EEEEEETTTTEEEEEEECC
T ss_pred CEEEEEeCCC--eEEEEECCCCCEEEEEEec
Confidence 4555566665 5889999888877776543
|
| >d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.46 E-value=2e-07 Score=94.37 Aligned_cols=100 Identities=16% Similarity=0.209 Sum_probs=71.4
Q ss_pred CCCccEEEEecCCCCCccC--C-cCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHH
Q psy2521 552 NRRNPVIIYGYGGYGVSVL--P-TFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMIN 628 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~--~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~ 628 (783)
..++| ||++||-.+.... . .|.. +...|.++||.|+++|++| +|..+..+ +++.+.++.+.+
T Consensus 5 ~~~~P-vvlvHG~~g~~~~~~~~yw~~-i~~~L~~~G~~v~~~~~~~---~~~~~~~a----------~~l~~~i~~~~~ 69 (285)
T d1ex9a_ 5 QTKYP-IVLAHGMLGFDNILGVDYWFG-IPSALRRDGAQVYVTEVSQ---LDTSEVRG----------EQLLQQVEEIVA 69 (285)
T ss_dssp CCSSC-EEEECCTTCCSEETTEESSTT-HHHHHHHTTCCEEEECCCS---SSCHHHHH----------HHHHHHHHHHHH
T ss_pred CCCCC-EEEECCCCCCccccchhhHHH-HHHHHHhCCCEEEEeCCCC---CCCcHHHH----------HHHHHHHHHHHH
Confidence 35678 6888996655422 2 2443 4456677899999999998 56555543 344555555544
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 629 KKYTKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 629 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
. ...+|+.++||||||+++..++.++|+.++.++....
T Consensus 70 ~--~g~~~v~ligHS~GG~~~r~~~~~~p~~v~~lv~i~t 107 (285)
T d1ex9a_ 70 L--SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107 (285)
T ss_dssp H--HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred H--cCCCeEEEEEECccHHHHHHHHHHCCccceeEEEECC
Confidence 3 2346899999999999999999999999999887644
|
| >d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol esterase) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Acetylcholinesterase-like domain: Bile-salt activated lipase (cholesterol esterase) species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.46 E-value=4.6e-08 Score=110.06 Aligned_cols=127 Identities=25% Similarity=0.237 Sum_probs=83.3
Q ss_pred EEEEEEEecCcC-CCCCccEEEEecCCC---CCccCCc------CcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhc-
Q psy2521 539 VPMYIIHRVGAL-RNRRNPVIIYGYGGY---GVSVLPT------FSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAG- 607 (783)
Q Consensus 539 v~~~~~~p~~~~-~~~~~P~ll~~hGg~---~~~~~~~------~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g- 607 (783)
+..-|+.|+... ...+.|++||+|||. |...... |... .+....+++|+.+|||-|- +| |...+
T Consensus 81 L~LNI~~P~~~~~~~~~lPV~V~iHGG~f~~Gs~~~~~~~~~~~~dg~--~la~~~~vIvVt~nYRlg~-~G--Fl~~~~ 155 (579)
T d2bcea_ 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGE--EIATRGNVIVVTFNYRVGP-LG--FLSTGD 155 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCH--HHHHHHTCEEEEECCCCHH-HH--HCCCSS
T ss_pred CEEEEEECCCCCCCCCCCcEEEEECCCcccCCCCCCcccCCccccchh--hhhccCCEEEEeecccccc-cc--cccccc
Confidence 455666776532 245789999999983 2222222 2222 2333346999999999632 22 11111
Q ss_pred cccCCcChHHHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhc--CCCceeEEEEcCCcc
Q psy2521 608 RLLKKQNCFDDFQAAAEYMINK---KYTKPKYITIMGGSNGGLLVGACLNQ--RPELYGAALILVGAL 670 (783)
Q Consensus 608 ~~~~~~~~~~D~~a~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~--~p~lf~a~i~~~~~~ 670 (783)
....+...+.|.+.|++|+.++ ---||++|.|+|+|+||..+...+.. ...||+.+|+.+|..
T Consensus 156 ~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDP~~VTl~G~SAGa~sv~~~l~sp~~~gLF~raI~~SGs~ 223 (579)
T d2bcea_ 156 SNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGVG 223 (579)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCCT
T ss_pred cCCCccchhhHHHHHHHHHhhhhhhhccCcCceEeeecccccchhhhhhhhhcccCccccceeccCCc
Confidence 1122334589999999999875 23699999999999999999887754 235999999999753
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.44 E-value=0.00011 Score=72.86 Aligned_cols=236 Identities=10% Similarity=0.032 Sum_probs=131.3
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
-.+..++|||||++||-+. .+ .+|+|||+.+++.+.... .......+.|+|++..++......
T Consensus 18 ~~I~~l~~sp~~~~l~s~s-~D----g~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~----------- 81 (317)
T d1vyhc1 18 SPVTRVIFHPVFSVMVSAS-ED----ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM----------- 81 (317)
T ss_dssp SCEEEEEECSSSSEEEEEE-SS----SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS-----------
T ss_pred CCeEEEEEcCCCCEEEEEe-CC----CeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccc-----------
Confidence 3578899999999887543 22 469999999998654221 122235789999999887666221
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
.+..++..... ....+. ..........++|+++.++.... ...+.++|+.++. ....+.
T Consensus 82 -----~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----d~~~~~~~~~~~~--------~~~~~~ 140 (317)
T d1vyhc1 82 -----TIKLWDFQGFE--CIRTMH--GHDHNVSSVSIMPNGDHIVSASR----DKTIKMWEVQTGY--------CVKTFT 140 (317)
T ss_dssp -----CCCEEETTSSC--EEECCC--CCSSCEEEEEECSSSSEEEEEET----TSEEEEEETTTCC--------EEEEEE
T ss_pred -----ccccccccccc--cccccc--cccccceeeeccCCCceEEeecc----CcceeEeecccce--------eeeEEc
Confidence 12223332211 111111 11223456789999999875432 2578888987731 112222
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEE---------------------E
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDV---------------------V 425 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~---------------------~ 425 (783)
........ .+++++..|+..+.. +.+..+++.... ....+... ...+.. .
T Consensus 141 ~~~~~~~~~~~~~~~~~l~~~~~d----~~v~~~~~~~~~---~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 212 (317)
T d1vyhc1 141 GHREWVRMVRPNQDGTLIASCSND----QTVRVWVVATKE---CKAELREH-RHVVECISWAPESSYSSISEATGSETKK 212 (317)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTCC---EEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC---
T ss_pred cCCCcceeeecccCCCEEEEEeCC----CeEEEEeeccce---eeEEEecC-CCCceEEEEeeccccceeeccccceeee
Confidence 21122222 477888776654432 335666655432 11111111 011111 1
Q ss_pred EEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 426 AAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 426 ~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.... +.+++....++ .|.+|++.+++.+..+......+..+..++++..++... . -..+..+|+
T Consensus 213 ~~~~-~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~---dg~i~iwd~ 276 (317)
T d1vyhc1 213 SGKP-GPFLLSGSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA-D---DKTLRVWDY 276 (317)
T ss_dssp -----CCEEEEEETTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEE-T---TTEEEEECC
T ss_pred eccC-CceeEeccCCC--EEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEE-C---CCeEEEEEC
Confidence 1122 34455555554 688899988888777766555677777888876655332 2 247899998
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.43 E-value=2.2e-05 Score=81.68 Aligned_cols=236 Identities=11% Similarity=0.097 Sum_probs=124.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-------------------cccccCeeEEeeCCCEEE
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-------------------KNVKFPSISWTHDHKGFF 270 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-------------------~~~~~~~~~WspDg~~l~ 270 (783)
.+..++|||||++||-+. + ..|+|||+.+|+.+.... .......++|+|||+.|+
T Consensus 64 ~V~~l~fs~dg~~lasg~-----d-~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 137 (388)
T d1erja_ 64 VVCCVKFSNDGEYLATGC-----N-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137 (388)
T ss_dssp CCCEEEECTTSSEEEEEC-----B-SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cEEEEEECCCCCEEEEEe-----C-CeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence 467899999999988542 2 359999999887532110 011124689999999887
Q ss_pred EEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECC
Q psy2521 271 YNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLH 350 (783)
Q Consensus 271 y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~ 350 (783)
-... ...|..++..+.. ....... .......+.+++++..++.... ...+.++|..
T Consensus 138 s~~~----------------dg~v~i~~~~~~~--~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~----~~~i~~~d~~ 193 (388)
T d1erja_ 138 TGAE----------------DRLIRIWDIENRK--IVMILQG--HEQDIYSLDYFPSGDKLVSGSG----DRTVRIWDLR 193 (388)
T ss_dssp EEET----------------TSCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTSSEEEEEET----TSEEEEEETT
T ss_pred eccc----------------ccccccccccccc--ccccccc--cccccccccccccccccccccc----ceeeeeeecc
Confidence 6552 1247777765432 1122222 2223457889999999876542 2578899987
Q ss_pred CCCCCcccCCCCceeeecCccceeE-EEE-eeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC-----CCceEE
Q psy2521 351 SLPDGKISGKFPLKTVIPGMDHHHE-IIA-NNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED-----ENRTLD 423 (783)
Q Consensus 351 ~g~~~~l~~~~~~~~l~~~~~~~~~-~~s-~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~-----~~~~l~ 423 (783)
+.. ............. .+. +++..|+..+. .+.|..++..++.. ...+.... ....+.
T Consensus 194 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----d~~i~i~~~~~~~~--~~~~~~~~~~~~~h~~~v~ 258 (388)
T d1erja_ 194 TGQ---------CSLTLSIEDGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGFL--VERLDSENESGTGHKDSVY 258 (388)
T ss_dssp TTE---------EEEEEECSSCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCCE--EEEEC------CCCSSCEE
T ss_pred ccc---------cccccccccccccccccCCCCCeEEEEcC----CCeEEEeecccCcc--ceeeccccccccCCCCCEE
Confidence 721 1111111111122 233 35555554332 23477778765431 12221111 012233
Q ss_pred EEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC------------CCeEEEeeeccccccEEEEEEecCCCCceE
Q psy2521 424 VVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL------------DLGQITHISGRRKYNEVFYGFTSFLQPGTI 491 (783)
Q Consensus 424 ~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~------------~~g~v~~~s~~~d~~~l~~~~ss~~~P~~v 491 (783)
.+.+..++.++++...++ .|.+||+.+++....... ....+..+.+++++..++.. +. -..+
T Consensus 259 ~l~~s~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg-~~---dg~i 332 (388)
T d1erja_ 259 SVVFTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG-SK---DRGV 332 (388)
T ss_dssp EEEECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEE-ET---TSEE
T ss_pred EEEECCCCCEEEEEECCC--cEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEE-eC---CCEE
Confidence 444433355556666664 678888865543222111 12345566677777655432 22 2478
Q ss_pred EEEeC
Q psy2521 492 YHCNI 496 (783)
Q Consensus 492 y~~d~ 496 (783)
+.||+
T Consensus 333 ~vwd~ 337 (388)
T d1erja_ 333 LFWDK 337 (388)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99998
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=98.43 E-value=1.7e-05 Score=82.89 Aligned_cols=211 Identities=14% Similarity=0.112 Sum_probs=115.5
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCCCcc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK--NVKFPSISWTHDHKGFFYNQYCDINGTADGTET 286 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~ 286 (783)
.+..++|||||++|+-+.. + ..|+|||+.++..... ... ......+.|+||++.|+....+
T Consensus 53 ~V~~l~fsp~~~~l~s~s~-D----~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d----------- 116 (371)
T d1k8kc_ 53 QVTGVDWAPDSNRIVTCGT-D----RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS----------- 116 (371)
T ss_dssp CEEEEEEETTTTEEEEEET-T----SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----------
T ss_pred CEEEEEECCCCCEEEEEEC-C----CeEEEEeecccccccccccccccccccccccccccccceeeccc-----------
Confidence 4788999999999875532 2 4699999987764321 111 1223578999999988876621
Q ss_pred cccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCC------
Q psy2521 287 TAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGK------ 360 (783)
Q Consensus 287 ~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~------ 360 (783)
..+.++.+......................+.|+|||++|+....+ ..+.++++..+........
T Consensus 117 -----~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D----~~v~v~~~~~~~~~~~~~~~~~~~~ 187 (371)
T d1k8kc_ 117 -----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD----FKCRIFSAYIKEVEERPAPTPWGSK 187 (371)
T ss_dssp -----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT----SCEEEEECCCTTTSCCCCCBTTBSC
T ss_pred -----CcceeeeeecccccccccccccccccccccccccccccceeccccC----cEEEEEeeccCcccccccccccccc
Confidence 1234444433322222222222122234678999999998754322 4677777754211110000
Q ss_pred CCc-eeee--cCccce-eE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEE
Q psy2521 361 FPL-KTVI--PGMDHH-HE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIV 435 (783)
Q Consensus 361 ~~~-~~l~--~~~~~~-~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~ 435 (783)
.+. ..+. ...... .. .|+|+|+.|+..+. ++.|..+|+..+. ....+..+. ..+..+.+..++.+++
T Consensus 188 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~----d~~i~iwd~~~~~--~~~~~~~~~--~~v~s~~fs~d~~~la 259 (371)
T d1k8kc_ 188 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH----DSTVCLADADKKM--AVATLASET--LPLLAVTFITESSLVA 259 (371)
T ss_dssp CCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET----TTEEEEEEGGGTT--EEEEEECSS--CCEEEEEEEETTEEEE
T ss_pred ccceeeeeeccCccCcEEEEEeeccccccccccc----CCcceEEeeeccc--ceeeeeccc--ccceeeeecCCCCEEE
Confidence 000 0111 111111 22 48999998876654 2468888987654 234444433 2334444444467666
Q ss_pred EEecCCeeEEEEEECCCCc
Q psy2521 436 HYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~ 454 (783)
.. .++...++.++...++
T Consensus 260 ~g-~d~~~~~~~~~~~~~~ 277 (371)
T d1k8kc_ 260 AG-HDCFPVLFTYDSAAGK 277 (371)
T ss_dssp EE-TTSSCEEEEEETTTTE
T ss_pred EE-cCCceEEEEeeCCCce
Confidence 54 4566678888764333
|
| >d1jmkc_ c.69.1.22 (C:) Surfactin synthetase, SrfA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Surfactin synthetase, SrfA species: Bacillus subtilis [TaxId: 1423]
Probab=98.42 E-value=1.1e-07 Score=92.59 Aligned_cols=81 Identities=11% Similarity=0.043 Sum_probs=58.7
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYT 632 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~ 632 (783)
++.|+||++||+.+.... |.. +...|. +|.+..+|++|.++ ..+|+++.+..+.
T Consensus 15 ~~~~~l~~lhg~~g~~~~--~~~-la~~L~--~~~v~~~~~~g~~~----------------~a~~~~~~i~~~~----- 68 (230)
T d1jmkc_ 15 DQEQIIFAFPPVLGYGLM--YQN-LSSRLP--SYKLCAFDFIEEED----------------RLDRYADLIQKLQ----- 68 (230)
T ss_dssp TCSEEEEEECCTTCCGGG--GHH-HHHHCT--TEEEEEECCCCSTT----------------HHHHHHHHHHHHC-----
T ss_pred CCCCeEEEEcCCCCCHHH--HHH-HHHHCC--CCEEeccCcCCHHH----------------HHHHHHHHHHHhC-----
Confidence 567899999999887744 443 445553 79999999998432 2456666555432
Q ss_pred CCCcEEEEEeChhHHHHHHHHhcCCCc
Q psy2521 633 KPKYITIMGGSNGGLLVGACLNQRPEL 659 (783)
Q Consensus 633 d~~ri~i~G~S~GG~l~~~~~~~~p~l 659 (783)
...++.|+|||+||.++..++.+.|+.
T Consensus 69 ~~~~~~lvGhS~GG~vA~~~A~~~~~~ 95 (230)
T d1jmkc_ 69 PEGPLTLFGYSAGCSLAFEAAKKLEGQ 95 (230)
T ss_dssp CSSCEEEEEETHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEeeccChHHHHHHHHhhhhh
Confidence 235799999999999999998876653
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.40 E-value=6.2e-05 Score=76.91 Aligned_cols=253 Identities=12% Similarity=0.060 Sum_probs=139.2
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+.++.|.+||+ |.| ++..+ ..|+.+|.++++...... ......++++++||+ ||.+....
T Consensus 40 ~~lEG~~~D~~G~-Ly~-~D~~~---g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~-l~va~~~~----------- 102 (319)
T d2dg1a1 40 LQLEGLNFDRQGQ-LFL-LDVFE---GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGD----------- 102 (319)
T ss_dssp CCEEEEEECTTSC-EEE-EETTT---CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTT-----------
T ss_pred cCcEeCEECCCCC-EEE-EECCC---CEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCC-EEEEecCC-----------
Confidence 3467899999998 544 45433 368889998876443221 122235789999995 55554211
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCC---CcEEEEEECCCCCCCcccCCCCce
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQ---GSDLHYFDLHSLPDGKISGKFPLK 364 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~---~~~l~~~dl~~g~~~~l~~~~~~~ 364 (783)
......++..+..+.. -..+............+.+++||+ |.+....... ...++.++.+++ ...
T Consensus 103 ~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~nd~~~d~~G~-l~vtd~~~~~~~~~g~v~~~~~dg~---------~~~ 170 (319)
T d2dg1a1 103 FKSTGGIFAATENGDN--LQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR---------TVT 170 (319)
T ss_dssp SSSCCEEEEECTTSCS--CEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSC---------CEE
T ss_pred CccceeEEEEcCCCce--eeeeccCCCcccCCcceeEEeccc-eeecccccccccCcceeEEEecccc---------eeE
Confidence 1112345554443332 122222211111234678999998 4444332211 256888887662 122
Q ss_pred eeecCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCc---EE-eecCCCCceEEEEEEeeCCEEEEEEec
Q psy2521 365 TVIPGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNW---KT-LIPEDENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 365 ~l~~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~---~~-li~~~~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
.+..+...... .|++||++||+... ...+|++++++....... .. .........-.++.+..++.|++....
T Consensus 171 ~~~~~~~~pnGia~s~dg~~lyvad~---~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~ 247 (319)
T d2dg1a1 171 PIIQNISVANGIALSTDEKVLWVTET---TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG 247 (319)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEG---GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET
T ss_pred EEeeccceeeeeeeccccceEEEecc---cCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcC
Confidence 33332222222 59999999988643 345799998764321100 11 111111122345666555677776654
Q ss_pred CCeeEEEEEECCCCceeeeecCCC---e---EEEeeeccccccEEEEEEecCCCC--ceEEEEeC
Q psy2521 440 NVRSVMDLHDLNTGKRLHSFPLDL---G---QITHISGRRKYNEVFYGFTSFLQP--GTIYHCNI 496 (783)
Q Consensus 440 ~g~~~l~~~dl~~G~~~~~l~~~~---g---~v~~~s~~~d~~~l~~~~ss~~~P--~~vy~~d~ 496 (783)
+ ..|.+++. +|+.+.+|.+|. + .+..+...++.+.++++..+...+ ..+|+++.
T Consensus 248 ~--g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~g~l~~~~~ 309 (319)
T d2dg1a1 248 Q--GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 309 (319)
T ss_dssp T--TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred C--CEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCCCCcCCceeEEEEeC
Confidence 4 47999998 799888888772 1 122333445666777766554433 45787776
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.39 E-value=3.6e-05 Score=82.41 Aligned_cols=161 Identities=12% Similarity=0.076 Sum_probs=94.3
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc-cccc----CeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK-NVKF----PSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~-~~~~----~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
...+++|||||++|+.+ +.+ ..++++|+.+++.... .+. .... .++.|||||++|+.+...+
T Consensus 63 ~~~~v~fSpDG~~l~~~-s~d----g~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~------- 130 (432)
T d1qksa2 63 AVHISRLSASGRYLFVI-GRD----GKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP------- 130 (432)
T ss_dssp CEEEEEECTTSCEEEEE-ETT----SEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET-------
T ss_pred CeeEEEECCCCCEEEEE-cCC----CCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCC-------
Confidence 36788999999999654 433 3699999999874321 111 1111 2345678999988776432
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEec-----------CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEF-----------PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~-----------~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
..+.+++..+.... .++.. ++ + ....+..||||+.+++.... ...++++|..++
T Consensus 131 --------~~v~i~d~~t~~~~--~~~~~~~~~~~~~~~~~~-~-~~~~v~~s~dg~~~~vs~~~---~~~i~~~d~~~~ 195 (432)
T d1qksa2 131 --------PQYVIMDGETLEPK--KIQSTRGMTYDEQEYHPE-P-RVAAILASHYRPEFIVNVKE---TGKILLVDYTDL 195 (432)
T ss_dssp --------TEEEEEETTTCCEE--EEEECCEECTTTCCEESC-C-CEEEEEECSSSSEEEEEETT---TTEEEEEETTCS
T ss_pred --------CeEEEEeCccccce--eeeccCCccccceeccCC-C-ceeEEEECCCCCEEEEEEcc---CCeEEEEEccCC
Confidence 35667776654321 11111 11 1 23457789999998776543 368999998773
Q ss_pred CCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCC
Q psy2521 353 PDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPC 406 (783)
Q Consensus 353 ~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~ 406 (783)
. ......+-.+.....-.++|||++++..++. ...+..++.++..
T Consensus 196 ~------~~~~~~i~~g~~~~~~~~spdg~~~~va~~~---~~~v~v~d~~~~~ 240 (432)
T d1qksa2 196 N------NLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKLVVIDTKEGK 240 (432)
T ss_dssp S------EEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEEEEEETTTTE
T ss_pred C------cceEEEEcccCccccceECCCCCEEEEeccc---cceEEEeecccce
Confidence 1 0111111111111112599999988876654 2357777776543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.37 E-value=3.2e-05 Score=78.44 Aligned_cols=250 Identities=11% Similarity=0.069 Sum_probs=131.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+.+++++|||+. |..+..+ .+|+.+|.++......... ....+++|+|||+ +|.+....
T Consensus 30 ~e~iAv~pdG~l--~vt~~~~---~~I~~i~p~g~~~~~~~~~-~~~~gla~~~dG~-l~v~~~~~-------------- 88 (302)
T d2p4oa1 30 LENLASAPDGTI--FVTNHEV---GEIVSITPDGNQQIHATVE-GKVSGLAFTSNGD-LVATGWNA-------------- 88 (302)
T ss_dssp EEEEEECTTSCE--EEEETTT---TEEEEECTTCCEEEEEECS-SEEEEEEECTTSC-EEEEEECT--------------
T ss_pred cCCEEECCCCCE--EEEeCCC---CEEEEEeCCCCEEEEEcCC-CCcceEEEcCCCC-eEEEecCC--------------
Confidence 678999999984 3344433 3689898765433222222 2336899999997 66555322
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCC-ceeee-c
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFP-LKTVI-P 368 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~-~~~l~-~ 368 (783)
..++.+.+.........+...+.. .+..++.+.+||+.++-. . ....+|.++..++.. .+....+ ..... .
T Consensus 89 -~~~~~~~~~~~~~~~~~~~~~~~~-~~~n~i~~~~~g~~~v~~--~--~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~ 161 (302)
T d2p4oa1 89 -DSIPVVSLVKSDGTVETLLTLPDA-IFLNGITPLSDTQYLTAD--S--YRGAIWLIDVVQPSG-SIWLEHPMLARSNSE 161 (302)
T ss_dssp -TSCEEEEEECTTSCEEEEEECTTC-SCEEEEEESSSSEEEEEE--T--TTTEEEEEETTTTEE-EEEEECGGGSCSSTT
T ss_pred -ceEEEEEecccccceeeccccCCc-cccceeEEccCCCEEeec--c--ccccceeeeccCCcc-eeEecCCccceeecc
Confidence 123444443333333344444433 244577889999765422 1 236888888776310 0000000 00000 0
Q ss_pred CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 369 GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 369 ~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
.......-++.+++.+|+.... +.+|++++.+.........+..+. ....++.+..++.|++....+ .+|.++
T Consensus 162 ~~~~~~ngi~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~--~~pdgia~d~dG~l~va~~~~--~~V~~i 234 (302)
T d2p4oa1 162 SVFPAANGLKRFGNFLYVSNTE---KMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIY--NSVVRI 234 (302)
T ss_dssp CCSCSEEEEEEETTEEEEEETT---TTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTT--CCEEEE
T ss_pred CcccccccccccCCceeeecCC---CCeEEeccccccccccccccccCC--CCCcceEECCCCCEEEEEcCC--CcEEEE
Confidence 0000111356678888886543 457999998764321112222222 123345555546777766554 469999
Q ss_pred ECCCCceeeee--cCC-CeE-EEeeec-cccccEEEEEEec--------CCCCceEEEEeC
Q psy2521 449 DLNTGKRLHSF--PLD-LGQ-ITHISG-RRKYNEVFYGFTS--------FLQPGTIYHCNI 496 (783)
Q Consensus 449 dl~~G~~~~~l--~~~-~g~-v~~~s~-~~d~~~l~~~~ss--------~~~P~~vy~~d~ 496 (783)
++ +|+..... ..+ .+. ...|.. ++|++.||++-+. -..|..++++|+
T Consensus 235 ~p-~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~g~~~~~~~~~~~~~~~~~~~ 294 (302)
T d2p4oa1 235 AP-DRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGGMFLPPPTGVVPANVVRLEV 294 (302)
T ss_dssp CT-TCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTTSSSCCTTCCCCEEEEEEEC
T ss_pred CC-CCCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCCCccCCCcCCcCCCeEEEEeC
Confidence 98 67653333 233 221 113433 4677888876542 345677777776
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.26 E-value=0.00028 Score=71.01 Aligned_cols=242 Identities=10% Similarity=0.065 Sum_probs=137.3
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
++.|.++...|.|+ |..+ ..|+.+|.++|+........ ..+.+++.+||+ |++.. . .
T Consensus 22 gp~wd~~~~~l~wv-Di~~---~~I~r~d~~~g~~~~~~~~~-~~~~i~~~~dg~-l~va~--~---------------~ 78 (295)
T d2ghsa1 22 GPTFDPASGTAWWF-NILE---RELHELHLASGRKTVHALPF-MGSALAKISDSK-QLIAS--D---------------D 78 (295)
T ss_dssp EEEEETTTTEEEEE-EGGG---TEEEEEETTTTEEEEEECSS-CEEEEEEEETTE-EEEEE--T---------------T
T ss_pred CCeEECCCCEEEEE-ECCC---CEEEEEECCCCeEEEEECCC-CcEEEEEecCCC-EEEEE--e---------------C
Confidence 58899987778665 4333 46999999999765333322 235788888874 55554 1 2
Q ss_pred eEEEEEcCCCCCCceeEEecCC-CC-eeEEEEEEecCCcEEEEEEecCCCC--cEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPN-GR-SLGLHSEVTDCGRYLLVSTSNNTQG--SDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~-~~-~~~~~~~~SpDGk~l~~~~~~~~~~--~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
.+++.+..++.. ..+..... .+ .......+.|+|+..+-........ ..+|.++ .|. ...+..
T Consensus 79 gl~~~d~~tg~~--~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~--~g~---------~~~~~~ 145 (295)
T d2ghsa1 79 GLFLRDTATGVL--TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK---------VTKLFA 145 (295)
T ss_dssp EEEEEETTTCCE--EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE---------EEEEEE
T ss_pred ccEEeeccccee--eEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeec--CCc---------EEEEee
Confidence 477777765432 22322211 11 1245678899998654333322122 3444443 321 222332
Q ss_pred Ccccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCC--C-CCcEEee-cCCCCceEEEEEEeeCCEEEEEEecCCee
Q psy2521 369 GMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPC--E-KNWKTLI-PEDENRTLDVVAAVANNKLIVHYIQNVRS 443 (783)
Q Consensus 369 ~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~--~-~~~~~li-~~~~~~~l~~~~~~~g~~l~~~~~~~g~~ 443 (783)
+..... ..|+++++.+|+.... ..+|++++++... . ......+ .........++.+..++.|++..-.. .
T Consensus 146 ~~~~~Ng~~~s~d~~~l~~~dt~---~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~--g 220 (295)
T d2ghsa1 146 DISIPNSICFSPDGTTGYFVDTK---VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE--G 220 (295)
T ss_dssp EESSEEEEEECTTSCEEEEEETT---TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT--T
T ss_pred ccCCcceeeecCCCceEEEeecc---cceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCC--C
Confidence 222211 2589999999986543 4568888875321 1 1112222 12223345566665556777665544 4
Q ss_pred EEEEEECCCCceeeeecCCCeEEEeeec-cccccEEEEEEecCCC----------CceEEEEeC
Q psy2521 444 VMDLHDLNTGKRLHSFPLDLGQITHISG-RRKYNEVFYGFTSFLQ----------PGTIYHCNI 496 (783)
Q Consensus 444 ~l~~~dl~~G~~~~~l~~~~g~v~~~s~-~~d~~~l~~~~ss~~~----------P~~vy~~d~ 496 (783)
.|.++|+ +|+.+..|.+|.-.++.... -++.++||++-.+... -+.+|++++
T Consensus 221 ~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~~~~~~~~~~~~p~~G~l~~~~~ 283 (295)
T d2ghsa1 221 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTFELGI 283 (295)
T ss_dssp EEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSS
T ss_pred ceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEEECCcCCChhHhccCCCCceEEEEcC
Confidence 7999998 79998999988333333322 3677889987654332 256887766
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.23 E-value=0.00016 Score=74.84 Aligned_cols=244 Identities=14% Similarity=0.101 Sum_probs=129.1
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..+..++|||||++|+.+.. + ..|+++|..+++.+..... ......+.|++++..++....
T Consensus 122 ~~V~~l~~s~~~~~l~s~~~-d----g~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~------------- 183 (388)
T d1erja_ 122 LYIRSVCFSPDGKFLATGAE-D----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG------------- 183 (388)
T ss_dssp CBEEEEEECTTSSEEEEEET-T----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-------------
T ss_pred CCEEEEEECCCCCcceeccc-c----ccccccccccccccccccccccccccccccccccccccccc-------------
Confidence 34778999999999886543 2 3599999998876543321 122357889999988876652
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEE-ecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEV-TDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV 366 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~-SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l 366 (783)
...+..+++.+.. ......... ......+ ++|+++|+.... ...|+++++.++. .+.........
T Consensus 184 ---~~~i~~~d~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~----d~~i~i~~~~~~~--~~~~~~~~~~~ 249 (388)
T d1erja_ 184 ---DRTVRIWDLRTGQ--CSLTLSIED---GVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGF--LVERLDSENES 249 (388)
T ss_dssp ---TSEEEEEETTTTE--EEEEEECSS---CEEEEEECSTTCCEEEEEET----TSCEEEEETTTCC--EEEEEC-----
T ss_pred ---ceeeeeeeccccc--ccccccccc---ccccccccCCCCCeEEEEcC----CCeEEEeecccCc--cceeecccccc
Confidence 2256777765432 112222211 1233344 457887765432 2578899987741 10000000000
Q ss_pred ecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCC----------cEEeecCCCCceEEEEEEeeCCEEE
Q psy2521 367 IPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKN----------WKTLIPEDENRTLDVVAAVANNKLI 434 (783)
Q Consensus 367 ~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~----------~~~li~~~~~~~l~~~~~~~g~~l~ 434 (783)
..+..... . .|+++|+.|+..+.. +.|..+|+....... ......+. .. +..+.+..++.++
T Consensus 250 ~~~h~~~v~~l~~s~~~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-v~~~~~s~~~~~l 323 (388)
T d1erja_ 250 GTGHKDSVYSVVFTRDGQSVVSGSLD----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK-DF-VLSVATTQNDEYI 323 (388)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETT----SEEEEEEC---------------CEEEEEECCS-SC-EEEEEECGGGCEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEECC----CcEEEEeccCCccccccccccccceeeeccccc-ce-EEEEEECCCCCEE
Confidence 11111122 2 488998877654432 357777775432100 00111111 22 2333333335556
Q ss_pred EEEecCCeeEEEEEECCCCceeeeecCCCeEEEeee------ccccccEEEEEEecCCCCceEEEEeC
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHIS------GRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s------~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++...++ .|++||+.+|+.+..+....+.|..+. ++|++.. +++.+.- .+|..||+
T Consensus 324 ~sg~~dg--~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~-l~s~s~D---g~I~iW~~ 385 (388)
T d1erja_ 324 LSGSKDR--GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV-FATGSGD---CKARIWKY 385 (388)
T ss_dssp EEEETTS--EEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE-EEEEETT---SEEEEEEE
T ss_pred EEEeCCC--EEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCE-EEEEeCC---CEEEEEee
Confidence 6666664 689999999998888876544454432 3455543 3343322 46777776
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.20 E-value=3e-05 Score=79.29 Aligned_cols=242 Identities=12% Similarity=0.032 Sum_probs=124.1
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccc-cccc---ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYP-EVLK---NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~-~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
..++|+|+|++|||+.. . ...|+.+|....+... .... ......++|+|++...++.+..
T Consensus 21 t~l~~~~~~~~la~~~~---~-~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs------------ 84 (325)
T d1pgua1 21 THLSYDPTTNAIAYPCG---K-SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD------------ 84 (325)
T ss_dssp CCCEEETTTTEEEEEET---T-EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE------------
T ss_pred EEEEECCCCCEEEEEeC---C-CEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEe------------
Confidence 45789999999999753 2 2345556544333211 1111 1123578999965433333311
Q ss_pred ccCCceEEEEEcCCCCCCcee------EEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCC
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIP------VVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKF 361 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~------v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~ 361 (783)
....|.+|++........+ .+..... -...+.|++||++|+...... ...+.+++.+++. .
T Consensus 85 --~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~--~v~~v~~s~~~~~l~~~~~~~--~~~~~~~~~~~~~--~----- 151 (325)
T d1pgua1 85 --ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG--PISDISWDFEGRRLCVVGEGR--DNFGVFISWDSGN--S----- 151 (325)
T ss_dssp --TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS--CEEEEEECTTSSEEEEEECCS--SCSEEEEETTTCC--E-----
T ss_pred --CCCCEEEeeecCCcceeeeecccccccccccC--cEEEEEECCCCCccceeeccc--cceEEEEeecccc--c-----
Confidence 1224666665433211111 1111111 235789999999998765432 2446666666531 1
Q ss_pred CceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeec-CCCCceEEEEEE-eeCCEEEEEE
Q psy2521 362 PLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIP-EDENRTLDVVAA-VANNKLIVHY 437 (783)
Q Consensus 362 ~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~-~~~~~~l~~~~~-~~g~~l~~~~ 437 (783)
.. .+.+..... . .|+++++.+++....+ ..+..+++...+. ...+.. +.....+..+.+ ++++.+++..
T Consensus 152 -~~-~~~~h~~~v~~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~~~--~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~ 224 (325)
T d1pgua1 152 -LG-EVSGHSQRINACHLKQSRPMRSMTVGDD---GSVVFYQGPPFKF--SASDRTHHKQGSFVRDVEFSPDSGEFVITV 224 (325)
T ss_dssp -EE-ECCSCSSCEEEEEECSSSSCEEEEEETT---TEEEEEETTTBEE--EEEECSSSCTTCCEEEEEECSTTCCEEEEE
T ss_pred -ce-eeeecccccccccccccccceEEEeecc---ccccccccccccc--ceecccccCCCCccEEeeeccccceecccc
Confidence 11 122222222 2 4888888766654432 3577777654331 112211 121233444443 3335677777
Q ss_pred ecCCeeEEEEEECCCCceeeeecCCC----eEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 438 IQNVRSVMDLHDLNTGKRLHSFPLDL----GQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 438 ~~~g~~~l~~~dl~~G~~~~~l~~~~----g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++ .|.+||+.+++.+..+..+. +.+..+.+ +++..+ ++.+. -..+..||+
T Consensus 225 ~~d~--~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~-~dg~~l-~s~s~---D~~i~iwd~ 280 (325)
T d1pgua1 225 GSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSW-LDSQKF-ATVGA---DATIRVWDV 280 (325)
T ss_dssp ETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEE-SSSSEE-EEEET---TSEEEEEET
T ss_pred cccc--ceeeeeeccccccccccccccccccceeeeec-cCCCEE-EEEeC---CCeEEEEEC
Confidence 6665 58889998888777776432 22222222 344444 33332 247888998
|
| >d2h7xa1 c.69.1.22 (A:9-291) Picromycin polyketide synthase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Picromycin polyketide synthase species: Streptomyces venezuelae [TaxId: 54571]
Probab=98.18 E-value=2.6e-07 Score=93.61 Aligned_cols=189 Identities=11% Similarity=-0.000 Sum_probs=98.4
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKK 630 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~ 630 (783)
.+..|.|+++||.........|.. +...|.. ++.|+.++++|.+. .-... ......+++++.+. ++.+...
T Consensus 57 ~~~~~~l~c~~~~~~~g~~~~y~~-la~~L~~-~~~V~al~~pG~~~---~~~~~--~~~~~~s~~~~a~~~~~~i~~~- 128 (283)
T d2h7xa1 57 AEGRAVLVGCTGTAANGGPHEFLR-LSTSFQE-ERDFLAVPLPGYGT---GTGTG--TALLPADLDTALDAQARAILRA- 128 (283)
T ss_dssp -CCCCEEEEECCCCTTCSTTTTHH-HHHTTTT-TCCEEEECCTTCCB---C---C--BCCEESSHHHHHHHHHHHHHHH-
T ss_pred CCCCceEEEeCCCCCCCCHHHHHH-HHHhcCC-CceEEEEeCCCCCC---CCCCc--cccccCCHHHHHHHHHHHHHHh-
Confidence 456789999998543333233443 4456664 78999999999332 11111 11112345555543 3444432
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhcC----CCceeEEEEcCCcchhhh--ccccc--ccccchhhhCCCCCHHH------
Q psy2521 631 YTKPKYITIMGGSNGGLLVGACLNQR----PELYGAALILVGALDMLR--FNKFT--IAYYSESEFGSPNNKTH------ 696 (783)
Q Consensus 631 ~~d~~ri~i~G~S~GG~l~~~~~~~~----p~lf~a~i~~~~~~d~~~--~~~~~--~~~~~~~~~g~p~~~~~------ 696 (783)
.....+.|+|||+||.++..++.+. ++...+++...+..-... ..... ...........+.....
T Consensus 129 -~~~~P~vL~GhS~GG~vA~e~A~~l~~~~g~~v~~LvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~ 207 (283)
T d2h7xa1 129 -AGDAPVVLLGHSGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGR 207 (283)
T ss_dssp -HTTSCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTCCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHH
T ss_pred -cCCCceEEEEeccchHHHHHHHHhhHHHcCCCceEEEEecCCccccccchhhhhhhhHHHhhcccccccccHHHHHHHH
Confidence 2234789999999999999888764 344566665443211100 00000 00000000011112111
Q ss_pred -HHHHHhcCcccCCCCCCCCCcCCcEEEEecCCCCCCCcHHHHHHHHHHHhhhCCCCCCCCcEEEEEeCCCCcc
Q psy2521 697 -FHNLLSYSPLHNIKVPPNNTQYPATLVLTGDHDDRVPPLHSYKFIATLQEKIGSLPYQKNPLLLRVEQDAGHG 769 (783)
Q Consensus 697 -~~~~~~~sp~~~v~~~~~~~~~P~~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~l~~~~~~gHg 769 (783)
++.+..+.| . .+.+| +|+++|+.|..+++.....+. +. -...+.+..+++ ||.
T Consensus 208 ~~~~~~~~~~----~----~~~~P-vl~i~g~~d~~~~~~~~~~w~----~~------~~~~~~~~~v~G-~H~ 261 (283)
T d2h7xa1 208 YARFLAGPRP----G----RSSAP-VLLVRASEPLGDWQEERGDWR----AH------WDLPHTVADVPG-DHF 261 (283)
T ss_dssp HHHHHHSCCC----C----CCCSC-EEEEEESSCSSCCCGGGCCCS----CC------CSSCSEEEEESS-CTT
T ss_pred HHHHHhhccc----c----ccCCC-eEEEEeCCCCCCCHHHHHHHH----Hh------CCCCcEEEEEcC-CCc
Confidence 111222211 1 26777 999999999999887654332 21 133457777776 786
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.17 E-value=9.3e-05 Score=74.99 Aligned_cols=61 Identities=11% Similarity=-0.035 Sum_probs=42.5
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-------ccccCeeEEeeCCCEEEEEEee
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-------NVKFPSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-------~~~~~~~~WspDg~~l~y~~~~ 275 (783)
..+++|||||++|..+...+ ..|+++|+.+++.+..... .....+++|+|||+.+|....+
T Consensus 42 p~~l~~spDG~~l~v~~~~~----~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~ 109 (346)
T d1jmxb_ 42 PGTAMMAPDNRTAYVLNNHY----GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNP 109 (346)
T ss_dssp SCEEEECTTSSEEEEEETTT----TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred cceEEECCCCCEEEEEECCC----CcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecC
Confidence 45789999999887654332 4699999999976532110 0123578999999998877643
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=98.16 E-value=0.0026 Score=58.00 Aligned_cols=289 Identities=14% Similarity=0.111 Sum_probs=158.9
Q ss_pred HHHHHHHHhhcCCCccCCcEE-eCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEE
Q psy2521 145 EAIKEQLLRMANYEKYSAPQR-QENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHF 223 (783)
Q Consensus 145 ~~~~~r~~~~~~~~~~~~p~~-~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~l 223 (783)
.||..-++++...+.+++--+ +++.+.|+....+. --+|... |.+.+.|.-.-.+ ....+-+.=.+|
T Consensus 2 seivk~lE~lv~ip~Y~v~Gkl~~d~ll~~~~seG~--vni~~l~---g~~~vkLtkePI~-------~~~~Pk~~ldfi 69 (313)
T d2hu7a1 2 SRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEGS--VNAYLYD---GGETVKLNREPIN-------SVLDPHYGVGRV 69 (313)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEETTE--EEEEEES---SSSCEECCSSCCS-------EECEECTTBSEE
T ss_pred hhHHHHHHHHhcccceeEEEEecCCcEEEEEeccce--EEEEEEe---CCEEEEEeccccc-------CcCCCccCcceE
Confidence 455666666654455555443 36666665544333 3344332 2333333322111 123444555678
Q ss_pred EEEEec-CCCceEEEEEEECC-CCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcC
Q psy2521 224 AYCLSK-SGSDWNTLHIKDVD-TGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLG 300 (783)
Q Consensus 224 a~~~~~-~G~d~~~i~v~Dl~-tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lg 300 (783)
.|..+. .|.|...||+.++. -|+..+.. ....+..+.+. |++.++|+.... ....+|..+=|
T Consensus 70 ~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~spk~vRI~S~~y--ddk~vvF~Gase-------------d~~~LYviegG 134 (313)
T d2hu7a1 70 ILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVD--TGEAVVFTGATE-------------DRVALYALDGG 134 (313)
T ss_dssp EEEEECSTTSCCEEEEEEETTSTTCEEECTTSCSBEEEEEEE--CSSCEEEEEECS-------------SCEEEEEEETT
T ss_pred EEEeehhcCcceeeEEEEccCCCCeeeEecCCceEEEEEeee--cCceEEEecccC-------------CceEEEEEeCC
Confidence 888775 68888899999997 25444333 23354344444 899999998432 22345555422
Q ss_pred CCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--EEE
Q psy2521 301 TEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--IIA 378 (783)
Q Consensus 301 t~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~~s 378 (783)
.-..+...|. | ++.-.=.|++|+-..--+.....+++.|+.+|. .+++...++... +..
T Consensus 135 ----klrkL~~vPp---F--sFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~----------lri~tpkeGS~~~ay~~ 195 (313)
T d2hu7a1 135 ----GLRELARLPG---F--GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG----------LRVFDSGEGSFSSASIS 195 (313)
T ss_dssp ----EEEEEEEESS---C--EEEEEEETTEEEEEEEEETTEEEEEEEETTTEE----------EEEECCSSEEEEEEEEC
T ss_pred ----ceeeeccCCC---c--ceEEeccCCeEEEEeeecCCcceEEEEecccCC----------EEEecCCCCcccceeEc
Confidence 1122333332 2 222233477776443322233558889996641 223444444433 455
Q ss_pred eeCCEEEEEECC-CCCCceEEEEcCCCCCCCCcEEe-ecCCC-----CceEEEEEEeeCCEEEEEEecCCeeEEEEEECC
Q psy2521 379 NNGPELIVKTTK-NAPKGKVVTINLNNPCEKNWKTL-IPEDE-----NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLN 451 (783)
Q Consensus 379 ~dg~~l~~~t~~-~~~~~~L~~~d~~~~~~~~~~~l-i~~~~-----~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~ 451 (783)
++ .++ .++. +.....++.+|+..+. ...+ +|+.+ ...+.++....++.|++...++|.+.|++
T Consensus 196 ~g-nKV--~sdyEt~gEsywit~D~~s~~---yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~---- 265 (313)
T d2hu7a1 196 PG-MKV--TAGLETAREARLVTVDPRDGS---VEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI---- 265 (313)
T ss_dssp TT-SCE--EEEEEESSCEEEEEECTTTCC---EEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE----
T ss_pred cC-cee--eeccCCCCceEEEEEecccCc---eeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheee----
Confidence 54 344 2322 2233445577887654 3332 34432 23344444444588989999999999875
Q ss_pred CCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEE
Q psy2521 452 TGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHC 494 (783)
Q Consensus 452 ~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~ 494 (783)
+|+. +..|.|.+++... =++.++++.+|..+|..+..+
T Consensus 266 nGk~---in~p~G~~~gat~--i~~~iyfshsSL~tP~kI~~~ 303 (313)
T d2hu7a1 266 DGER---VEAPQGNHGRVVL--WRGKLVTSHTSLSTPPRIVSL 303 (313)
T ss_dssp TTEE---ECCCSSEEEEEEE--ETTEEEEEEEETTEEEEEEEE
T ss_pred cceE---ecCCCCcccceEE--ECCEEEEeecccCCCceeEEc
Confidence 7875 5566677655432 246899999999999998765
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.15 E-value=0.0001 Score=74.41 Aligned_cols=259 Identities=11% Similarity=0.062 Sum_probs=123.0
Q ss_pred cEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEEC
Q psy2521 163 PQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDV 242 (783)
Q Consensus 163 p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl 242 (783)
.+++|.++|..-.. .+.-.+|.....+...++..... . ......++|||||++|+.....+ ..+.+++.
T Consensus 44 ~spDG~~L~v~~~~--d~~i~~~~i~~~~~~~~~~~~~~-~----~~~p~~l~~spDg~~l~v~~~~~----~~v~~~~~ 112 (333)
T d1ri6a_ 44 VSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESA-L----PGSLTHISTDHQGQFVFVGSYNA----GNVSVTRL 112 (333)
T ss_dssp ECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEE-C----SSCCSEEEECTTSSEEEEEETTT----TEEEEEEE
T ss_pred EeCCCCEEEEEECC--CCeEEEEEEeCCCCcEEEeeecc-c----CCCceEEEEcCCCCEEeecccCC----Cceeeecc
Confidence 45788888765422 22345565543333322221111 1 11234689999999987664322 34566665
Q ss_pred CCCccccc---cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeE---EecCCCC
Q psy2521 243 DTGKDYPE---VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPV---VEFPNGR 316 (783)
Q Consensus 243 ~tg~~~~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v---~~~~~~~ 316 (783)
+.+..... ........++.++||++.++..... ...+..+++.+........ ......
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~---------------~~~i~~~~~~~~~~~~~~~~~~~~~~~g- 176 (333)
T d1ri6a_ 113 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK---------------QDRICLFTVSDDGHLVAQDPAEVTTVEG- 176 (333)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG---------------GTEEEEEEECTTSCEEEEEEEEEECSTT-
T ss_pred ccccceecccccCCCccceEEEeeecceeeeccccc---------------cceeeEEEeccCCcceeeeceeeeeecC-
Confidence 54432211 1112223578899999988877632 2246666655432211111 111111
Q ss_pred eeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee---cCcccee-EEEEeeCCEEEEEECCCC
Q psy2521 317 SLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDHHH-EIIANNGPELIVKTTKNA 392 (783)
Q Consensus 317 ~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~~~~~~~-~~~s~dg~~l~~~t~~~~ 392 (783)
..-..+.+++++++++...... ....+.+.... ...+........+. ....... ..+++|++.++..... .
T Consensus 177 ~~p~~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~-~ 251 (333)
T d1ri6a_ 177 AGPRHMVFHPNEQYAYCVNELN---SSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-A 251 (333)
T ss_dssp CCEEEEEECTTSSEEEEEETTT---TEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-T
T ss_pred CCccEEEEeccceeEEeecccc---CceEEEeeccc-ccceeeeeeeeeeecCCCccccceeEEEecccCceeeeccc-C
Confidence 1224678999999887654332 34444444331 11100000000000 0111111 2588999887765433 3
Q ss_pred CCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCce
Q psy2521 393 PKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKR 455 (783)
Q Consensus 393 ~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~ 455 (783)
....++.++.++.. .......+.. .......+.++|++|++....++.-.|+.+|.++|+.
T Consensus 252 ~~~~~~~~~~~~~~-~~~~~~~~~~-~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 252 SLITVFSVSEDGSV-LSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp TEEEEEEECTTSCC-EEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred CeEEEEEEcCCCCE-EEEEEEeCCC-CCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 33345555544332 1112222222 2222223455666777665555544566668777864
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.14 E-value=0.00021 Score=72.61 Aligned_cols=247 Identities=11% Similarity=0.123 Sum_probs=133.6
Q ss_pred eeEEECCCCcEEEEEEecCCC----ceEEEEEEECCCCcccccccc-----ccccCeeEEeeCCCEEEEEEeecCCCCCC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGS----DWNTLHIKDVDTGKDYPEVLK-----NVKFPSISWTHDHKGFFYNQYCDINGTAD 282 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~----d~~~i~v~Dl~tg~~~~~~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 282 (783)
.+++|.|||+... ++..+. ...+|+.+|.++++....... .....++.+.+||+.+|....
T Consensus 21 EGpa~d~dG~ly~--~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~-------- 90 (314)
T d1pjxa_ 21 EGPVFDKNGDFYI--VAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------- 90 (314)
T ss_dssp EEEEECTTSCEEE--EETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET--------
T ss_pred eEeEEeCCCCEEE--EECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEEC--------
Confidence 4688999998433 232221 123699999998874322111 111247899999987766541
Q ss_pred CCcccccCCceEEEEEcCCCCCCceeEEecCCCCee--EEEEEEecCCcEEEEEEecCC------------CCcEEEEEE
Q psy2521 283 GTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSL--GLHSEVTDCGRYLLVSTSNNT------------QGSDLHYFD 348 (783)
Q Consensus 283 g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~--~~~~~~SpDGk~l~~~~~~~~------------~~~~l~~~d 348 (783)
...+++.+..+.. ..++....+...+ -..+.+.+||+.. ++..... ....||.++
T Consensus 91 --------~~~i~~~~~~g~~--~~~~~~~~~g~~~~~pndl~~d~~G~ly-vtd~~~~~~~~~~~~~~~~~~G~v~~~~ 159 (314)
T d1pjxa_ 91 --------RLGLLVVQTDGTF--EEIAKKDSEGRRMQGCNDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp --------TTEEEEEETTSCE--EECCSBCTTSCBCBCCCEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred --------CCeEEEEeCCCcE--EEEEeccccccccCCCcEEEECCCCCEE-EecCccCcccccccceeccCCceEEEEe
Confidence 1246666654321 1111111111111 1346788999643 4432111 114688887
Q ss_pred CCCCCCCcccCCCCceeeecCccceeE-EEEeeCC----EEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC---CCCc
Q psy2521 349 LHSLPDGKISGKFPLKTVIPGMDHHHE-IIANNGP----ELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE---DENR 420 (783)
Q Consensus 349 l~~g~~~~l~~~~~~~~l~~~~~~~~~-~~s~dg~----~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~---~~~~ 420 (783)
.++. ...+..+...... .|+++++ .||+.. ..+.+|++++++.......++++.. ....
T Consensus 160 ~dg~----------~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d---~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T d1pjxa_ 160 TDGQ----------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAE---TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp TTSC----------EEEEEEEESSEEEEEEEECTTSCEEEEEEEE---TTTTEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred ecCc----------eeEeeCCcceeeeeEECCCCCcceeEEEEEe---ecccceEEeeccCccccceeeEEEEccccccc
Confidence 6551 2222222221112 4888765 566543 2356799988764321112222221 1122
Q ss_pred eEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 421 TLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 421 ~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
...++.+..++.|++..... .+|+++|++.|+.+..+..|....+++...++++++|++-+. -.+|+++++.
T Consensus 227 ~pdGiavD~~GnlyVa~~~~--g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~---~g~i~~~~~~ 298 (314)
T d1pjxa_ 227 GADGMDFDEDNNLLVANWGS--SHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQ 298 (314)
T ss_dssp EEEEEEEBTTCCEEEEEETT--TEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECS
T ss_pred cceeeEEecCCcEEEEEcCC--CEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECC---CCcEEEEECC
Confidence 34556666556787765433 579999996566556677663334455566788888886543 2589999984
|
| >d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: TTHA1544-like domain: Hypothetical protein TTHA1544 species: Thermus thermophilus [TaxId: 274]
Probab=98.14 E-value=1.8e-06 Score=74.68 Aligned_cols=98 Identities=7% Similarity=-0.053 Sum_probs=66.2
Q ss_pred EECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhcccc
Q psy2521 531 FRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLL 610 (783)
Q Consensus 531 ~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~ 610 (783)
|..-+|.++..... +..|.||++||.+.. |. ..|. .+|.|+++|.||.|...
T Consensus 5 ~~~~~G~~l~y~~~--------G~G~pvlllHG~~~~-----w~----~~L~-~~yrvi~~DlpG~G~S~---------- 56 (122)
T d2dsta1 5 YLHLYGLNLVFDRV--------GKGPPVLLVAEEASR-----WP----EALP-EGYAFYLLDLPGYGRTE---------- 56 (122)
T ss_dssp EEEETTEEEEEEEE--------CCSSEEEEESSSGGG-----CC----SCCC-TTSEEEEECCTTSTTCC----------
T ss_pred EEEECCEEEEEEEE--------cCCCcEEEEeccccc-----cc----cccc-CCeEEEEEeccccCCCC----------
Confidence 33457877766653 456889999985322 21 2355 59999999999944321
Q ss_pred CCcChHHHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhcCCC
Q psy2521 611 KKQNCFDDFQAAAEYMINKKYTKPKYITIMGGSNGGLLVGACLNQRPE 658 (783)
Q Consensus 611 ~~~~~~~D~~a~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~ 658 (783)
......+++.+.+..+++. .+-++..|+|+|+||.++..++...+.
T Consensus 57 ~p~~s~~~~a~~i~~ll~~--L~i~~~~viG~S~Gg~ia~~laa~~~~ 102 (122)
T d2dsta1 57 GPRMAPEELAHFVAGFAVM--MNLGAPWVLLRGLGLALGPHLEALGLR 102 (122)
T ss_dssp CCCCCHHHHHHHHHHHHHH--TTCCSCEEEECGGGGGGHHHHHHTTCC
T ss_pred CcccccchhHHHHHHHHHH--hCCCCcEEEEeCccHHHHHHHHhhccc
Confidence 1124456666666666655 234578999999999999999887654
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.14 E-value=0.00053 Score=72.85 Aligned_cols=259 Identities=11% Similarity=0.114 Sum_probs=151.4
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEE-EeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCC---------
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEV-FLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSG--------- 231 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~-llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G--------- 231 (783)
.++++|.++.|.-..+|.+...|++++..+++..- .+. + ...+++.|++|++.|.|+.....
T Consensus 131 ~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~-------~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~ 202 (430)
T d1qfma1 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-R-------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (430)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-E-------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred EecCCCCEEEEEeccccCchheeEEeccCcceecccccc-c-------ccccceEEcCCCCEEEEEEeccccCccccccc
Confidence 35678889999888888889999998875554211 111 1 11256899999999999874321
Q ss_pred --CceEEEEEEECCCCccccccc-c---c-cccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC
Q psy2521 232 --SDWNTLHIKDVDTGKDYPEVL-K---N-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD 304 (783)
Q Consensus 232 --~d~~~i~v~Dl~tg~~~~~~~-~---~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~ 304 (783)
.....++...+-++......+ + . ..+..+..+.|++.++...... ......+|..++.....
T Consensus 203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~-----------~~~~~~~~~~d~~~~~~ 271 (430)
T d1qfma1 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREG-----------CDPVNRLWYCDLQQESN 271 (430)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECS-----------SSSCCEEEEEEGGGSSS
T ss_pred ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeecc-----------CCccEEEEEeeCCCccc
Confidence 113478888887764322111 1 1 1123455688999888766332 12234677777654432
Q ss_pred C------ceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeE--E
Q psy2521 305 K------DIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHE--I 376 (783)
Q Consensus 305 ~------d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~--~ 376 (783)
. ...+....... + .. ...+|..+++..+.......|..++++.. ....|..++...+.... .
T Consensus 272 ~~~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~------~~~~w~~vi~~~~~~~~~~~ 341 (430)
T d1qfma1 272 GITGILKWVKLIDNFEGE-Y--DY-VTNEGTVFTFKTNRHSPNYRLINIDFTDP------EESKWKVLVPEHEKDVLEWV 341 (430)
T ss_dssp SSCSSCCCEEEECSSSSC-E--EE-EEEETTEEEEEECTTCTTCEEEEEETTBC------CGGGCEEEECCCSSCEEEEE
T ss_pred ccccccceeEeecccccc-e--EE-EecCCceeecccCcccccceeEEecCCCC------ccccceEEecccCcceeeeE
Confidence 1 11233222211 1 12 23355555556565444588999999772 12346667765443332 3
Q ss_pred EEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE-eeCCEEEEEEec-CCeeEEEEEECCCCc
Q psy2521 377 IANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA-VANNKLIVHYIQ-NVRSVMDLHDLNTGK 454 (783)
Q Consensus 377 ~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~-~~g~~l~~~~~~-~g~~~l~~~dl~~G~ 454 (783)
++..+++|++....+ ...+|..++++++. +..+.+.... .+..+.. .+++.+++.+.. -.++.++.+|+.+|+
T Consensus 342 ~~~~~~~lvl~~~~~-~~~~l~v~~~~~~~---~~~~~~~~~~-sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~ 416 (430)
T d1qfma1 342 ACVRSNFLVLCYLHD-VKNTLQLHDLATGA---LLKIFPLEVG-SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (430)
T ss_dssp EEETTTEEEEEEEET-TEEEEEEEETTTCC---EEEEECCCSS-EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEECCEEEEEEEcC-CEeEEEEEECCCCc---EEEecCCCCc-eEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence 555567777655443 45679999988765 6666665533 3333332 233467766553 345789999998875
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.13 E-value=5.9e-06 Score=86.37 Aligned_cols=127 Identities=9% Similarity=-0.075 Sum_probs=78.6
Q ss_pred EEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 214 YAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 214 ~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
.+++|||++..+..........+||++|.++++.+.....+. ...++|||||+.|++....... .....+...
T Consensus 25 ~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~-~~~~a~spDg~~i~~~~~~~~~------~~~g~~d~~ 97 (368)
T d1mdah_ 25 HGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LSLAVAGHSGSDFALASTSFAR------SAKGKRTDY 97 (368)
T ss_dssp CCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TCEEEECTTSSCEEEEEEEETT------TTSSSEEEE
T ss_pred cccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCC-CCcceECCCCCEEEEEcccCcc------ccccccCCe
Confidence 467899998665554333333789999999998776433332 3579999999999987632210 000123345
Q ss_pred EEEEEcCCCCCCceeEEecCCCCee-----EEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSL-----GLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~-----~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
|.+++..+..... ....+..... -..+.||||||+|++.... ...++++|+.++
T Consensus 98 v~v~D~~t~~~~~--~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~---~~~v~~~d~~~~ 156 (368)
T d1mdah_ 98 VEVFDPVTFLPIA--DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---SSAAAGLSVPGA 156 (368)
T ss_dssp EEEECTTTCCEEE--EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS---SSCEEEEEETTT
T ss_pred EEEEECCCCcEee--eecCCccceecccCCccceEECCCCCEEEEEeCC---CCeEEEEECCCC
Confidence 7888877653221 1122211111 1257899999999876432 367899999884
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.04 E-value=0.00014 Score=72.44 Aligned_cols=194 Identities=9% Similarity=0.068 Sum_probs=108.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+..+.+||||+.++...+ ..+.+++....... . .......++|+||++.|+....
T Consensus 102 ~~~~~~s~~g~~~~~~~~------~~i~~~~~~~~~~~--~-~~~~~~~~~~s~~~~~l~~g~~---------------- 156 (299)
T d1nr0a2 102 PLGLAVSADGDIAVAACY------KHIAIYSHGKLTEV--P-ISYNSSCVALSNDKQFVAVGGQ---------------- 156 (299)
T ss_dssp EEEEEECTTSSCEEEEES------SEEEEEETTEEEEE--E-CSSCEEEEEECTTSCEEEEEET----------------
T ss_pred cccccccccccccccccc------cccccccccccccc--c-cccccccccccccccccccccc----------------
Confidence 556889999998876543 25778875432211 1 1112257899999998876552
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
...|..+++.+........... ......+.++|++++|+.... ...|+++|+.++. .+. .... ....
T Consensus 157 dg~i~~~d~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~----d~~i~~~~~~~~~--~~~---~~~~-~~~h 223 (299)
T d1nr0a2 157 DSKVHVYKLSGASVSEVKTIVH---PAEITSVAFSNNGAFLVATDQ----SRKVIPYSVANNF--ELA---HTNS-WTFH 223 (299)
T ss_dssp TSEEEEEEEETTEEEEEEEEEC---SSCEEEEEECTTSSEEEEEET----TSCEEEEEGGGTT--EES---CCCC-CCCC
T ss_pred cccccccccccccccccccccc---ccccccccccccccccccccc----ccccccccccccc--ccc---cccc-cccc
Confidence 2357777775542211111111 223467899999999876433 2578999987631 110 0111 1111
Q ss_pred ccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEE
Q psy2521 371 DHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLH 448 (783)
Q Consensus 371 ~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~ 448 (783)
.... . .|+|+|+.|+..+.. +.|..+|+..+..... ..........+....+.+++. +++...|+ .|.+|
T Consensus 224 ~~~v~~l~~s~~~~~l~sgs~d----g~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-l~s~s~D~--~i~iW 295 (299)
T d1nr0a2 224 TAKVACVSWSPDNVRLATGSLD----NSVIVWNMNKPSDHPI-IIKGAHAMSSVNSVIWLNETT-IVSAGQDS--NIKFW 295 (299)
T ss_dssp SSCEEEEEECTTSSEEEEEETT----SCEEEEETTCTTSCCE-EETTSSTTSCEEEEEEEETTE-EEEEETTS--CEEEE
T ss_pred ccccccccccccccceEEEcCC----CEEEEEECCCCCcceE-EEecCCCCCcEEEEEECCCCE-EEEEeCCC--EEEEE
Confidence 2222 2 489999887765432 3588888876542111 122222234455555566455 44555664 58888
Q ss_pred EC
Q psy2521 449 DL 450 (783)
Q Consensus 449 dl 450 (783)
|+
T Consensus 296 dl 297 (299)
T d1nr0a2 296 NV 297 (299)
T ss_dssp EC
T ss_pred ec
Confidence 86
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.99 E-value=0.00097 Score=65.58 Aligned_cols=231 Identities=11% Similarity=0.113 Sum_probs=124.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTA 288 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~ 288 (783)
.+..+.++|+|++++..... ..+.+++....+...... .........|+|+++.++....
T Consensus 61 ~V~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 121 (317)
T d1vyhc1 61 SVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR-------------- 121 (317)
T ss_dssp CEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET--------------
T ss_pred cEEEEeeecccccccccccc-----cccccccccccccccccccccccceeeeccCCCceEEeecc--------------
Confidence 47789999999999877643 245667766655432211 1222256889999998876552
Q ss_pred cCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc-ccC-CCCceee
Q psy2521 289 HMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK-ISG-KFPLKTV 366 (783)
Q Consensus 289 ~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~-l~~-~~~~~~l 366 (783)
...+.++++.+.. ....+.... .....+.++||+++|+..... ..+.++++.++.... +.. ......+
T Consensus 122 --d~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d----~~v~~~~~~~~~~~~~~~~~~~~i~~~ 191 (317)
T d1vyhc1 122 --DKTIKMWEVQTGY--CVKTFTGHR--EWVRMVRPNQDGTLIASCSND----QTVRVWVVATKECKAELREHRHVVECI 191 (317)
T ss_dssp --TSEEEEEETTTCC--EEEEEECCS--SCEEEEEECTTSSEEEEEETT----SCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred --CcceeEeecccce--eeeEEccCC--CcceeeecccCCCEEEEEeCC----CeEEEEeeccceeeEEEecCCCCceEE
Confidence 2356777776543 222333222 234678899999988754332 467778876631000 000 0000000
Q ss_pred e----------cCccce-eEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEE
Q psy2521 367 I----------PGMDHH-HEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIV 435 (783)
Q Consensus 367 ~----------~~~~~~-~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~ 435 (783)
. ...... .......+..++. ... ...|..+++.++. ....+..+. . .+..+.+..++.+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---d~~i~~~~~~~~~--~~~~~~~~~-~-~v~~~~~~~~~~~l~ 263 (317)
T d1vyhc1 192 SWAPESSYSSISEATGSETKKSGKPGPFLLS-GSR---DKTIKMWDVSTGM--CLMTLVGHD-N-WVRGVLFHSGGKFIL 263 (317)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEE-EET---TSEEEEEETTTTE--EEEEEECCS-S-CEEEEEECSSSSCEE
T ss_pred EEeeccccceeeccccceeeeeccCCceeEe-ccC---CCEEEEEECCCCc--EEEEEeCCC-C-CEEEEEECCCCCEEE
Confidence 0 000000 0012223333332 222 2457777876654 123333332 3 333444433355566
Q ss_pred EEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEE
Q psy2521 436 HYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVF 479 (783)
Q Consensus 436 ~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~ 479 (783)
+...++ .|.+||+.+++.+..+....+.|..+.++++++.++
T Consensus 264 s~~~dg--~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~ 305 (317)
T d1vyhc1 264 SCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV 305 (317)
T ss_dssp EEETTT--EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE
T ss_pred EEECCC--eEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 666664 689999988888777776556677888888876555
|
| >d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterases domain: Palmitoyl protein thioesterase 1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=97.96 E-value=2.7e-05 Score=77.00 Aligned_cols=107 Identities=11% Similarity=-0.049 Sum_probs=61.4
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcC--CEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHc
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHF--NGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINK 629 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~ 629 (783)
..+.| ||++||-.+....+.-...+..++.+. |+.|..+++..+. ......+. .....+.++.+...+++
T Consensus 3 ~~P~P-VVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~l~~g~~~---~~~~~~~~----~~~~~~~~e~v~~~I~~ 74 (279)
T d1ei9a_ 3 PAPLP-LVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTL---REDVENSF----FLNVNSQVTTVCQILAK 74 (279)
T ss_dssp TSSCC-EEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCCSSSH---HHHHHHHH----HSCHHHHHHHHHHHHHS
T ss_pred CCCCc-EEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEEEEcCCCc---ccccccch----hhhHHHHHHHHHHHHHh
Confidence 34566 557899655543332233445566544 8888888865421 11111111 11234555544444443
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhcCCC-ceeEEEEc
Q psy2521 630 KYTKPKYITIMGGSNGGLLVGACLNQRPE-LYGAALIL 666 (783)
Q Consensus 630 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-lf~a~i~~ 666 (783)
-..-.+++-++|||+||+++-+++.+.++ .....|+.
T Consensus 75 ~~~~~~~v~lVGhSqGGLiaR~~i~~~~~~~V~~lITL 112 (279)
T d1ei9a_ 75 DPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISV 112 (279)
T ss_dssp CGGGTTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEE
T ss_pred ccccccceeEEEEccccHHHHHHHHHcCCCCcceEEEE
Confidence 22334689999999999999999988775 24455554
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.77 E-value=0.0087 Score=59.49 Aligned_cols=235 Identities=10% Similarity=0.059 Sum_probs=122.2
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccccc----------------------ccCeeEEeeCC
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNV----------------------KFPSISWTHDH 266 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~----------------------~~~~~~WspDg 266 (783)
.......++|+++.++..... ..|+++|+.++.......... ...-..+.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (355)
T d1nexb2 97 VRCLDIVEYKNIKYIVTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 171 (355)
T ss_dssp EEEEEEEEETTEEEEEEEETT-----SEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEET
T ss_pred ccccccccccccceeeeecCC-----CcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccccccccccc
Confidence 334556788999988876542 468999988765332111000 00122345566
Q ss_pred CEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEE
Q psy2521 267 KGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHY 346 (783)
Q Consensus 267 ~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~ 346 (783)
+.++.... ...+..+++.+.. ........ ........++|++++++....+ ..|.+
T Consensus 172 ~~~~~~~~----------------d~~i~~~d~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d----~~i~i 227 (355)
T d1nexb2 172 NIVVSGSY----------------DNTLIVWDVAQMK--CLYILSGH--TDRIYSTIYDHERKRCISASMD----TTIRI 227 (355)
T ss_dssp TEEEEEET----------------TSCEEEEETTTTE--EEEEECCC--SSCEEEEEEETTTTEEEEEETT----SCEEE
T ss_pred ceeeeecc----------------cceeeeeeccccc--ceeeeecc--ccccccccccccceeeeccccc----ceEEe
Confidence 65554441 2356777775432 22222222 2234578899999998865433 56889
Q ss_pred EECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEE
Q psy2521 347 FDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVA 426 (783)
Q Consensus 347 ~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~ 426 (783)
+|+.++. ......+.......+..+++.|+.. .. ++.|..+|+.+.. +.+..+. ..+.....
T Consensus 228 ~d~~~~~---------~~~~~~~h~~~v~~~~~~~~~l~~~-~~---dg~i~iwd~~~~~----~~~~~~~-~~~~~~~~ 289 (355)
T d1nexb2 228 WDLENGE---------LMYTLQGHTALVGLLRLSDKFLVSA-AA---DGSIRGWDANDYS----RKFSYHH-TNLSAITT 289 (355)
T ss_dssp EETTTCC---------EEEEECCCSSCCCEEEECSSEEEEE-CT---TSEEEEEETTTCC----EEEEEEC-TTCCCCCE
T ss_pred eeccccc---------cccccccccccccccccccceeeee-ec---ccccccccccccc----eeccccc-CCceEEEE
Confidence 9988741 1112222233333455566665543 32 3468888987654 2333232 22222222
Q ss_pred EeeCCEEEEEEecCCeeEEEEEECCCCceeeee-cCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 427 AVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSF-PLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 427 ~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l-~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+..++.+++... ++ .|.+||+++|+.++.. ..+.+.|..+..+++ .++++.+. ..-..++.+|.
T Consensus 290 ~~~~~~~l~~g~-d~--~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~--~~~~~~s~-dg~~~l~~~df 354 (355)
T d1nexb2 290 FYVSDNILVSGS-EN--QFNIYNLRSGKLVHANILKDADQIWSVNFKGK--TLVAAVEK-DGQSFLEILDF 354 (355)
T ss_dssp EEECSSEEEEEE-TT--EEEEEETTTCCBCCSCTTTTCSEEEEEEEETT--EEEEEEES-SSCEEEEEEEC
T ss_pred EcCCCCEEEEEe-CC--EEEEEECCCCCEEEEEecCCCCCEEEEEEcCC--eEEEEEEC-CCcEEEEEEeC
Confidence 233366666654 43 6999999889876543 333556666666543 45444332 22223455553
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.77 E-value=0.00035 Score=70.17 Aligned_cols=128 Identities=11% Similarity=0.023 Sum_probs=75.5
Q ss_pred EEEEEEECCCCcccccc-c--cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEe
Q psy2521 235 NTLHIKDVDTGKDYPEV-L--KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVE 311 (783)
Q Consensus 235 ~~i~v~Dl~tg~~~~~~-~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~ 311 (783)
.+|+|+|+++++.+... . .+....+++|||||+.+|.+.. ....|+.+++.+.... ....
T Consensus 11 ~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~---------------~~~~v~v~D~~t~~~~--~~~~ 73 (337)
T d1pbyb_ 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---------------KSESLVKIDLVTGETL--GRID 73 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---------------TTTEEEEEETTTCCEE--EEEE
T ss_pred CEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEEC---------------CCCeEEEEECCCCcEE--EEEe
Confidence 46999999999865422 1 1223468999999998876651 2347888888775321 1122
Q ss_pred cCCCCe---eEEEEEEecCCcEEEEEEecCC--------CCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEee
Q psy2521 312 FPNGRS---LGLHSEVTDCGRYLLVSTSNNT--------QGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANN 380 (783)
Q Consensus 312 ~~~~~~---~~~~~~~SpDGk~l~~~~~~~~--------~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~d 380 (783)
...... ....+.+||||++++....... ....+.++|..++. ....+..........+++|
T Consensus 74 ~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------~~~~~~~~~~~~~~~~s~d 145 (337)
T d1pbyb_ 74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--------RRKAFEAPRQITMLAWARD 145 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--------EEEEEECCSSCCCEEECTT
T ss_pred cCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCe--------EEEeccccCCceEEEEcCC
Confidence 111111 1236789999999987654311 12577888887731 0111111111112258999
Q ss_pred CCEEEEE
Q psy2521 381 GPELIVK 387 (783)
Q Consensus 381 g~~l~~~ 387 (783)
|+.++..
T Consensus 146 g~~l~~~ 152 (337)
T d1pbyb_ 146 GSKLYGL 152 (337)
T ss_dssp SSCEEEE
T ss_pred CCEEEEE
Confidence 9988864
|
| >d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Fatty acid synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.73 E-value=1.2e-05 Score=79.37 Aligned_cols=91 Identities=10% Similarity=-0.023 Sum_probs=55.6
Q ss_pred CccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCCCC
Q psy2521 554 RNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKYTK 633 (783)
Q Consensus 554 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~~d 633 (783)
+.| ||++||+++.+.. |. .+....++.|+.+|.+|-|... +.....+|..+++..+ ..
T Consensus 25 ~~P-l~l~Hg~~gs~~~--~~----~l~~~L~~~v~~~d~~g~~~~~----------~~~~~a~~~~~~~~~~-----~~ 82 (286)
T d1xkta_ 25 ERP-LFLVHPIEGSTTV--FH----SLASRLSIPTYGLQCTRAAPLD----------SIHSLAAYYIDCIRQV-----QP 82 (286)
T ss_dssp SCC-EEEECCTTCCCGG--GH----HHHHTCSSCEEEECCCTTSCCS----------CHHHHHHHHHHHHHHH-----CC
T ss_pred CCe-EEEECCCCccHHH--HH----HHHHHcCCeEEEEeCCCCCCCC----------CHHHHHHHHHHHHHHh-----cC
Confidence 345 7799999888654 32 3444457889999999844321 1111123333333322 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhcCCCceeEEEEc
Q psy2521 634 PKYITIMGGSNGGLLVGACLNQRPELYGAALIL 666 (783)
Q Consensus 634 ~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~ 666 (783)
-+++.++|||+||.++..++.++|+....++..
T Consensus 83 ~~~~~lvGhS~Gg~vA~~~A~~~p~~~~~v~~l 115 (286)
T d1xkta_ 83 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTH 115 (286)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHC------C
T ss_pred CCceEEeecCCccHHHHHHHHHHHHcCCCceeE
Confidence 358899999999999999999999876665443
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.70 E-value=0.0013 Score=65.28 Aligned_cols=246 Identities=12% Similarity=0.038 Sum_probs=121.3
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc---c-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV---L-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~---~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
.+..++|||||++||-+.. + .+|+|||++++...... . .......++|+|++..++++...
T Consensus 13 ~I~~l~fsp~~~~L~s~s~-D----g~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~---------- 77 (342)
T d1yfqa_ 13 YISDIKIIPSKSLLLITSW-D----GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---------- 77 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET-T----SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET----------
T ss_pred CEEEEEEeCCCCEEEEEEC-C----CeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccc----------
Confidence 4889999999999987643 2 47999998776532211 1 12223578999998777766632
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...|+++++...... ....... ........+.+++..++.... ...+.++|+..+.... ....
T Consensus 78 -----d~~v~~w~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~wd~~~~~~~~-----~~~~ 140 (342)
T d1yfqa_ 78 -----QGEILKVDLIGSPSF--QALTNNE-ANLGICRICKYGDDKLIAASW----DGLIEVIDPRNYGDGV-----IAVK 140 (342)
T ss_dssp -----TSCEEEECSSSSSSE--EECBSCC-CCSCEEEEEEETTTEEEEEET----TSEEEEECHHHHTTBC-----EEEE
T ss_pred -----ccceeeeeccccccc--ccccccc-ccccccccccccccccccccc----ccccceeeccccccce-----eeec
Confidence 235777777654322 1111111 111233445666666654432 2467777765421000 0000
Q ss_pred eecC----ccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCC
Q psy2521 366 VIPG----MDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNV 441 (783)
Q Consensus 366 l~~~----~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g 441 (783)
.... .......+.+++..++..+.. ..+..+++...........................++..++....++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 216 (342)
T d1yfqa_ 141 NLNSNNTKVKNKIFTMDTNSSRLIVGMNN----SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp ESCSSSSSSCCCEEEEEECSSEEEEEEST----TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred ccccccccceeeeeeeeccCCceeeecCC----CcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCC
Confidence 0000 011111356667766665543 45777777654322111222222122222223333345566666666
Q ss_pred eeEEEEEECCCCce-----eeee------c---CCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 442 RSVMDLHDLNTGKR-----LHSF------P---LDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 442 ~~~l~~~dl~~G~~-----~~~l------~---~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.-.++.++.. ... ...+ . ...+.+..+.++|+++.++ +.+. -+.|..||+
T Consensus 217 ~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~la-sg~~---Dg~v~vWD~ 280 (342)
T d1yfqa_ 217 RVAVEFFDDQ-GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGS---DGIISCWNL 280 (342)
T ss_dssp EEEEEECCTT-CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEET---TSCEEEEET
T ss_pred eEEEEEecCC-cceeeccccceeeeeeeccCCCcccccceeEEecCCccEEE-EECC---CCEEEEEEC
Confidence 4444433321 110 0000 0 0123456677788876554 3332 247999999
|
| >d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Dog (Canis familiaris) [TaxId: 9615]
Probab=97.69 E-value=2.5e-05 Score=79.28 Aligned_cols=112 Identities=9% Similarity=-0.027 Sum_probs=75.9
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
+...|+++++||.-+............++|.+..+.|+++|.+.+... .+..+.. +-...-..+...+++|..+..
T Consensus 67 ~~~~pt~iiiHGw~~~~~~~~~~~~~~a~l~~~d~NVI~VDW~~~a~~--~Y~~a~~--n~~~Vg~~ia~~i~~l~~~~g 142 (337)
T d1rp1a2 67 QTDKKTRFIIHGFIDKGEENWLLDMCKNMFKVEEVNCICVDWKKGSQT--SYTQAAN--NVRVVGAQVAQMLSMLSANYS 142 (337)
T ss_dssp CTTSEEEEEECCCCCTTCTTHHHHHHHHHTTTCCEEEEEEECHHHHSS--CHHHHHH--HHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeCCCcCCCCcchHHHHHHHHHhcCCceEEEEeeccccCc--chHHHHH--HHHHHHHHHHHHHHHHHHhcC
Confidence 467899999999866655444444456777766799999999864322 2222211 111222455556777777666
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCC
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVG 668 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~ 668 (783)
+++++|.|+|||.||.+++.+..+. .....++..-|
T Consensus 143 ~~~~~vhlIGhSLGAhvAG~aG~~~-~~l~rItgLDP 178 (337)
T d1rp1a2 143 YSPSQVQLIGHSLGAHVAGEAGSRT-PGLGRITGLDP 178 (337)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTS-TTCCEEEEESC
T ss_pred CChhheEEEeecHHHhhhHHHHHhh-ccccceeccCC
Confidence 8999999999999999999887654 44566666555
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.66 E-value=0.015 Score=57.61 Aligned_cols=238 Identities=10% Similarity=0.100 Sum_probs=121.7
Q ss_pred EECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc-cccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 215 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL-KNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 215 ~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
++++||++||-+.. + ..|+|||+.+++.+..-. .......++|+||+ .|+-... ...
T Consensus 18 c~~~~~~~l~tgs~-D----g~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~----------------D~~ 75 (355)
T d1nexb2 18 CLQFEDNYVITGAD-D----KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST----------------DRT 75 (355)
T ss_dssp EEEEETTEEEEEET-T----TEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEET----------------TCC
T ss_pred EEEECCCEEEEEeC-C----CeEEEEECCCCcEEEEEECCCCCEEEEEEcCCC-EEEEEec----------------ccc
Confidence 46778998875432 2 469999999998654221 12223578999875 4443331 235
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccC---CCCc-------
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISG---KFPL------- 363 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~---~~~~------- 363 (783)
|..+++..... .................+++++++++..... ..|.++|+.++....... ....
T Consensus 76 i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (355)
T d1nexb2 76 VRVWDIKKGCC--THVFEGHNSTVRCLDIVEYKNIKYIVTGSRD----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 149 (355)
T ss_dssp EEEEETTTTEE--EEEECCCSSCEEEEEEEEETTEEEEEEEETT----SEEEEEECCC-----------CCCEEESCTTT
T ss_pred ccccccccccc--ccccccccccccccccccccccceeeeecCC----CcEEEEEccCCceeccccccceeccceecccc
Confidence 67777654321 1122222222233456678899888765432 578888876631100000 0000
Q ss_pred ----eeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEec
Q psy2521 364 ----KTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQ 439 (783)
Q Consensus 364 ----~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~ 439 (783)
.............+.++++.++.... ...+..+|+.+.. .................... +..++....
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----d~~i~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 221 (355)
T d1nexb2 150 NPYFVGVLRGHMASVRTVSGHGNIVVSGSY----DNTLIVWDVAQMK---CLYILSGHTDRIYSTIYDHE-RKRCISASM 221 (355)
T ss_dssp CTTEEEEEECCSSCEEEEEEETTEEEEEET----TSCEEEEETTTTE---EEEEECCCSSCEEEEEEETT-TTEEEEEET
T ss_pred ccceeeeeeeccccccccccccceeeeecc----cceeeeeeccccc---ceeeeecccccccccccccc-ceeeecccc
Confidence 00000111112235567776655433 2357778876543 12222222233333334444 444455555
Q ss_pred CCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 440 NVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 440 ~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
++ .|.+|++.+++.+..+....+.+..+..+ ++.+ ++.+. -..+..+|+
T Consensus 222 d~--~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l-~~~~~---dg~i~iwd~ 270 (355)
T d1nexb2 222 DT--TIRIWDLENGELMYTLQGHTALVGLLRLS--DKFL-VSAAA---DGSIRGWDA 270 (355)
T ss_dssp TS--CEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEE-EEECT---TSEEEEEET
T ss_pred cc--eEEeeeccccccccccccccccccccccc--ccee-eeeec---ccccccccc
Confidence 54 58889998888777776544444444443 2333 33322 357889998
|
| >d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Pancreatic lipase, N-terminal domain domain: Pancreatic lipase, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.54 E-value=5.9e-05 Score=76.23 Aligned_cols=115 Identities=11% Similarity=-0.029 Sum_probs=78.3
Q ss_pred CCCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHHHHHHcCC
Q psy2521 552 NRRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAEYMINKKY 631 (783)
Q Consensus 552 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~~l~~~~~ 631 (783)
+...|+++++||.-+............++|.+..+.|+++|...+... .+..+... -...=..+...+++|.....
T Consensus 67 ~~~~pt~iiiHG~~~~~~~~~~~~~~~a~l~~~d~NVi~VDW~~~a~~--~Y~~a~~n--~~~Vg~~ia~~i~~l~~~~g 142 (338)
T d1bu8a2 67 QLDRKTRFIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRT--EYTQASYN--TRVVGAEIAFLVQVLSTEMG 142 (338)
T ss_dssp CTTSEEEEEECCSCCTTCTTHHHHHHHHHHTTCCEEEEEEECHHHHSS--CHHHHHHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCceEEEeCcccCCCCcccHHHHHHHHHhcCCceEEEEechhhccc--chHHHHHh--HHHHHHHHHHHHHHHHHhcC
Confidence 567899999999766555444444456778766799999999864332 23332221 11112233446666666656
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcCCCceeEEEEcCCcc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQRPELYGAALILVGAL 670 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~p~lf~a~i~~~~~~ 670 (783)
+++++|.++|||.|+.+++.+..+-+.....++..-|.-
T Consensus 143 ~~~~~vhlIGhSLGAhiaG~ag~~l~~kigrItgLDPA~ 181 (338)
T d1bu8a2 143 YSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (338)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcceeEEEeccHHHHHHHHHHHhhccccccccccccCc
Confidence 899999999999999999999887766667777665543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.48 E-value=0.015 Score=59.59 Aligned_cols=165 Identities=8% Similarity=0.006 Sum_probs=81.7
Q ss_pred eeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccc-ccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 212 KLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEV-LKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 212 ~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
+.+++||||++|.. ... | ....+.+|-+++...... ..+.....+..++|++.+|.......
T Consensus 43 s~la~s~d~~~ly~-~~~-~--~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~------------- 105 (365)
T d1jofa_ 43 SWMTFDHERKNIYG-AAM-K--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQP------------- 105 (365)
T ss_dssp SEEEECTTSSEEEE-EEB-T--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSST-------------
T ss_pred CEEEEcCCCCEEEE-EeC-C--cEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCC-------------
Confidence 46889999998754 432 2 245666665555332211 11112246778899998877663211
Q ss_pred CceEEEEEc------------CCCCCC-c-eeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCc
Q psy2521 291 GQKIYYHVL------------GTEQDK-D-IPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGK 356 (783)
Q Consensus 291 ~~~v~~~~l------------gt~~~~-d-~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~ 356 (783)
...++...+ .....- . ....+....+ ...++.+||||++++... .+ ...|++++... ...
T Consensus 106 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~-h~h~v~~sPdG~~l~v~d-~g--~d~v~~~~~~~--~g~ 179 (365)
T d1jofa_ 106 PYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT-GIHGMVFDPTETYLYSAD-LT--ANKLWTHRKLA--SGE 179 (365)
T ss_dssp TCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTC-CEEEEEECTTSSEEEEEE-TT--TTEEEEEEECT--TSC
T ss_pred CCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCC-cceEEEECCCCCEEEEee-CC--CCEEEEEEccC--CCc
Confidence 112222221 111000 0 0011111212 346789999999998653 32 35788877544 111
Q ss_pred ccCCCCceeeec---CccceeEEEEeeCCEEEEEECCCCCCceEEEEcCCCC
Q psy2521 357 ISGKFPLKTVIP---GMDHHHEIIANNGPELIVKTTKNAPKGKVVTINLNNP 405 (783)
Q Consensus 357 l~~~~~~~~l~~---~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~ 405 (783)
+. ....... +.....-.++|||+.+|+....+ ..|..++.+..
T Consensus 180 ~~---~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~---~~V~v~~~~~~ 225 (365)
T d1jofa_ 180 VE---LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG---NRICEYVIDPA 225 (365)
T ss_dssp EE---EEEEEECSSTTCCEEEEEECTTSSEEEEEETTT---TEEEEEEECTT
T ss_pred ee---eccceeecCCCCceEEEEECCCCceEEEeccCC---CEEEEEEecCC
Confidence 11 0111111 11111225899999888765432 34666665543
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.47 E-value=0.024 Score=55.23 Aligned_cols=217 Identities=10% Similarity=0.023 Sum_probs=119.7
Q ss_pred EEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCC--CCceeEEec-
Q psy2521 236 TLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQ--DKDIPVVEF- 312 (783)
Q Consensus 236 ~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~--~~d~~v~~~- 312 (783)
.|+.+++++.........-....++.|.+.++.||++.. ....|++..+.... .....+...
T Consensus 11 ~I~~~~l~~~~~~~~~~~~~~~~~id~d~~~~~lYw~D~---------------~~~~I~~~~l~~~~~~~~~~~~~~~~ 75 (266)
T d1ijqa1 11 EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL---------------SQRMICSTQLDRAHGVSSYDTVISRD 75 (266)
T ss_dssp SEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET---------------TTTEEEEEEC--------CEEEECSS
T ss_pred eEEEEECCCCcceeeeCCCCceEEEEEEeCCCEEEEEEC---------------CCCEEEEEEecCCCCCcceEEEEeCC
Confidence 488899988765433221112246788888899988752 12367777765321 111222221
Q ss_pred CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-ccceeE-EEEeeCCEEEEEECC
Q psy2521 313 PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDHHHE-IIANNGPELIVKTTK 390 (783)
Q Consensus 313 ~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~~~~-~~s~dg~~l~~~t~~ 390 (783)
...+ .++++.+-++.|.+... ....|.++++++.. ...+... ...-.. .+.|..+.+|+.. .
T Consensus 76 ~~~p---~glAvD~~~~~lY~~d~---~~~~I~v~~~~g~~---------~~~~~~~~~~~P~~l~vd~~~g~ly~~~-~ 139 (266)
T d1ijqa1 76 IQAP---DGLAVDWIHSNIYWTDS---VLGTVSVADTKGVK---------RKTLFRENGSKPRAIVVDPVHGFMYWTD-W 139 (266)
T ss_dssp CSCC---CEEEEETTTTEEEEEET---TTTEEEEEETTSSS---------EEEEEECTTCCEEEEEEETTTTEEEEEE-C
T ss_pred CCCc---ceEEEeeccceEEEEec---CCCEEEeEecCCce---------EEEEEcCCCCCcceEEEEcccCeEEEec-c
Confidence 1222 35677778888877542 33689999998721 1222222 111112 4677777788753 3
Q ss_pred CCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEECCCCceeeeec-CC--CeEE
Q psy2521 391 NAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFP-LD--LGQI 466 (783)
Q Consensus 391 ~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~-~~--~g~v 466 (783)
+...+|+++++++.. .+.++.+. -....++.+. .++.||+.... ...|...++ +|...+.+. .. ....
T Consensus 140 -~~~~~I~r~~~dGs~---~~~l~~~~-~~~p~gl~iD~~~~~lYw~d~~--~~~I~~~~~-dG~~~~~~~~~~~~~~~p 211 (266)
T d1ijqa1 140 -GTPAKIKKGGLNGVD---IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDV-NGGNRKTILEDEKRLAHP 211 (266)
T ss_dssp -SSSCEEEEEETTSCC---EEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEET-TSCSCEEEEECTTTTSSE
T ss_pred -CCCcceeEeccCCCc---eecccccc-cceeeEEEeeccccEEEEecCC--cCEEEEEEC-CCCCEEEEEeCCCccccc
Confidence 234689999998765 45566544 2233445544 34788887544 357999999 665433332 11 1111
Q ss_pred EeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 467 THISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 467 ~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+++ .+++.+|++- . ....+++++.
T Consensus 212 ~~la--v~~~~ly~td--~-~~~~I~~~~~ 236 (266)
T d1ijqa1 212 FSLA--VFEDKVFWTD--I-INEAIFSANR 236 (266)
T ss_dssp EEEE--EETTEEEEEE--T-TTTEEEEEET
T ss_pred EEEE--EECCEEEEEE--C-CCCeEEEEEC
Confidence 1333 2346677542 2 3468999987
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.29 E-value=0.014 Score=57.99 Aligned_cols=191 Identities=10% Similarity=0.040 Sum_probs=104.0
Q ss_pred EEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEE
Q psy2521 183 ILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISW 262 (783)
Q Consensus 183 ~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~W 262 (783)
.|++.+..+++.+.+.++..- .......+..+.|+|+..+-.... ......-.++.+..|+.......-....+++|
T Consensus 79 gl~~~d~~tg~~~~l~~~~~~--~~~~~~nd~~vd~~G~iw~~~~~~-~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~ 155 (295)
T d2ghsa1 79 GLFLRDTATGVLTLHAELESD--LPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVAKGKVTKLFADISIPNSICF 155 (295)
T ss_dssp EEEEEETTTCCEEEEECSSTT--CTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEETTEEEEEEEEESSEEEEEE
T ss_pred ccEEeecccceeeEEeeeecC--CCcccceeeEECCCCCEEEEeccc-cccccceeEeeecCCcEEEEeeccCCcceeee
Confidence 467776666777777775422 123567888999999854433322 11111223333345654332211111258999
Q ss_pred eeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCC----CceeEEecCCCCeeEEEEEEecCCcEEEEEEecC
Q psy2521 263 THDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQD----KDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNN 338 (783)
Q Consensus 263 spDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~----~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~ 338 (783)
++|++.++++.. ....||++++..... +.......+.....-.++....+|... +....
T Consensus 156 s~d~~~l~~~dt---------------~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlW-va~~~- 218 (295)
T d2ghsa1 156 SPDGTTGYFVDT---------------KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW-NARWG- 218 (295)
T ss_dssp CTTSCEEEEEET---------------TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE-EEEET-
T ss_pred cCCCceEEEeec---------------ccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEE-eeeeC-
Confidence 999999988872 245788888753321 122223333323344577888888633 33222
Q ss_pred CCCcEEEEEECCCCCCCcccCCCCceeeecCccc-eeEEE-EeeCCEEEEEECCCCC----------CceEEEEcCCC
Q psy2521 339 TQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDH-HHEII-ANNGPELIVKTTKNAP----------KGKVVTINLNN 404 (783)
Q Consensus 339 ~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~-~~~~~-s~dg~~l~~~t~~~~~----------~~~L~~~d~~~ 404 (783)
...|..+|.++. . ...+.-+... .-..| .+|.++||+.|.+.+. .+.|+++++..
T Consensus 219 --~g~V~~~dp~G~---~------~~~i~lP~~~~T~~~FGG~d~~~LyvTta~~~~~~~~~~~~p~~G~l~~~~~~~ 285 (295)
T d2ghsa1 219 --EGAVDRYDTDGN---H------IARYEVPGKQTTCPAFIGPDASRLLVTSAREHLDDDAITANPQHGLTFELGIEV 285 (295)
T ss_dssp --TTEEEEECTTCC---E------EEEEECSCSBEEEEEEESTTSCEEEEEEBCTTCCHHHHHHCTTTTCEEECSSCC
T ss_pred --CCceEEecCCCc---E------eeEecCCCCceEEEEEeCCCCCEEEEEECCcCCChhHhccCCCCceEEEEcCCC
Confidence 257888887651 1 1111111111 11234 4788999998765321 35788887654
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.29 E-value=0.09 Score=50.77 Aligned_cols=227 Identities=7% Similarity=0.031 Sum_probs=126.5
Q ss_pred CcEEEEEEecCCCceEEEEEEECCCCccccc------cccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCce
Q psy2521 220 GKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE------VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQK 293 (783)
Q Consensus 220 G~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~------~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~ 293 (783)
|.+|.|+.. ..|+.+++++...... ........++++.+-++.||++.. ....
T Consensus 1 ~~fLl~s~~------~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~---------------~~~~ 59 (263)
T d1npea_ 1 GTHLLFAQT------GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI---------------SEPS 59 (263)
T ss_dssp CEEEEEEEE------EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET---------------TTTE
T ss_pred CCEEEEeCC------CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEEC---------------CCCe
Confidence 567888764 5788889876543211 111111235677777888887652 2347
Q ss_pred EEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecC-ccc
Q psy2521 294 IYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPG-MDH 372 (783)
Q Consensus 294 v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~-~~~ 372 (783)
|++..+.+...+ +++......+ .++++..-++.|.+... ....|.++++++.. ...+... ...
T Consensus 60 I~~~~l~g~~~~-~v~~~~~~~p---~~iAvD~~~~~lY~~d~---~~~~I~~~~~dg~~---------~~~l~~~~l~~ 123 (263)
T d1npea_ 60 IGRASLHGGEPT-TIIRQDLGSP---EGIALDHLGRTIFWTDS---QLDRIEVAKMDGTQ---------RRVLFDTGLVN 123 (263)
T ss_dssp EEEEESSSCCCE-EEECTTCCCE---EEEEEETTTTEEEEEET---TTTEEEEEETTSCS---------CEEEECSSCSS
T ss_pred EEEEEcccCCcE-EEEEeccccc---cEEEEeccCCeEEEecc---CCCEEEEEecCCce---------EEEEecccccC
Confidence 888888754322 2222221222 45677767888876542 23689999988721 1223222 121
Q ss_pred eeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEe-eCCEEEEEEecCCeeEEEEEEC
Q psy2521 373 HHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAV-ANNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 373 ~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~-~g~~l~~~~~~~g~~~l~~~dl 450 (783)
-.. .+.|..+.+|+.. .+....+|+++++++.. .+.++.+. -....++.+. .++.||+... +...|...++
T Consensus 124 p~~l~vdp~~g~ly~t~-~~~~~~~I~r~~~dG~~---~~~i~~~~-~~~P~glaiD~~~~~lYw~d~--~~~~I~~~~~ 196 (263)
T d1npea_ 124 PRGIVTDPVRGNLYWTD-WNRDNPKIETSHMDGTN---RRILAQDN-LGLPNGLTFDAFSSQLCWVDA--GTHRAECLNP 196 (263)
T ss_dssp EEEEEEETTTTEEEEEE-CCSSSCEEEEEETTSCC---CEEEECTT-CSCEEEEEEETTTTEEEEEET--TTTEEEEEET
T ss_pred CcEEEEecccCcEEEee-cCCCCcEEEEecCCCCC---ceeeeeec-ccccceEEEeecCcEEEEEeC--CCCEEEEEEC
Confidence 122 4778778888754 34445679999998765 34555443 2222344443 3478888754 3457999999
Q ss_pred CCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 451 NTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 451 ~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+|...+.+......-.+++. +++.+|++=.. -.+++++|.
T Consensus 197 -~g~~~~~v~~~~~~P~~lav--~~~~lYwtd~~---~~~I~~~~~ 236 (263)
T d1npea_ 197 -AQPGRRKVLEGLQYPFAVTS--YGKNLYYTDWK---TNSVIAMDL 236 (263)
T ss_dssp -TEEEEEEEEECCCSEEEEEE--ETTEEEEEETT---TTEEEEEET
T ss_pred -CCCCeEEEECCCCCcEEEEE--ECCEEEEEECC---CCEEEEEEC
Confidence 67654444221111112322 34566654322 347888887
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.23 E-value=0.087 Score=51.39 Aligned_cols=152 Identities=10% Similarity=0.100 Sum_probs=86.8
Q ss_pred EEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEEEeeCCEEEEEECCCCCCceEEEEc
Q psy2521 322 SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEIIANNGPELIVKTTKNAPKGKVVTIN 401 (783)
Q Consensus 322 ~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~t~~~~~~~~L~~~d 401 (783)
..+++|+++|+....+ ..|.++|+..+. ..............++++++.|+..+. .+.|..++
T Consensus 181 ~~~~~~~~~l~s~~~d----g~i~~~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~l~s~s~----d~~i~iwd 243 (342)
T d2ovrb2 181 YSLQFDGIHVVSGSLD----TSIRVWDVETGN---------CIHTLTGHQSLTSGMELKDNILVSGNA----DSTVKIWD 243 (342)
T ss_dssp EEEEECSSEEEEEETT----SCEEEEETTTCC---------EEEEECCCCSCEEEEEEETTEEEEEET----TSCEEEEE
T ss_pred ccccCCCCEEEEEeCC----CeEEEeecccce---------eeeEecccccceeEEecCCCEEEEEcC----CCEEEEEe
Confidence 4567899988754332 578999988731 111222223333457778887665443 24588888
Q ss_pred CCCCCCCCcEEeecCCC-CceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCC-----CeEEEeeeccccc
Q psy2521 402 LNNPCEKNWKTLIPEDE-NRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-----LGQITHISGRRKY 475 (783)
Q Consensus 402 ~~~~~~~~~~~li~~~~-~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-----~g~v~~~s~~~d~ 475 (783)
+..... ...+..... ...+..+. .+ +.++++...+| .|.+||+.+|+.++.+... .+.|..+.+++++
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~-~~-~~~~~s~s~Dg--~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~ 317 (342)
T d2ovrb2 244 IKTGQC--LQTLQGPNKHQSAVTCLQ-FN-KNFVITSSDDG--TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 317 (342)
T ss_dssp TTTCCE--EEEECSTTSCSSCEEEEE-EC-SSEEEEEETTS--EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred cccccc--cccccccceeeeceeecc-cC-CCeeEEEcCCC--EEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCC
Confidence 766441 222322221 12222222 34 34555666664 6999999899987776431 3467778888876
Q ss_pred cEEEEEEecCCCCceEEEEeC
Q psy2521 476 NEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 476 ~~l~~~~ss~~~P~~vy~~d~ 496 (783)
..++....+-+.-..++.+|+
T Consensus 318 ~~la~g~~dGt~~~~l~~~Df 338 (342)
T d2ovrb2 318 LVCAVGSRNGTEETKLLVLDF 338 (342)
T ss_dssp EEEEEECSSSSSCCEEEEEEC
T ss_pred CEEEEEeCCCCCeeEEEEEeC
Confidence 444433333334456888887
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.23 E-value=0.02 Score=59.72 Aligned_cols=119 Identities=12% Similarity=0.009 Sum_probs=62.8
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccc-ccccCeeEEeeCCCEEEEEEeecCCCC--CCCCc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLK-NVKFPSISWTHDHKGFFYNQYCDINGT--ADGTE 285 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~--~~g~~ 285 (783)
.++....+||||+| |..+... .+|-++|+++++.... .+. .....++.++|||+++|.....+.... .++..
T Consensus 73 ~~s~t~gtpDGr~l-fV~d~~~---~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~ 148 (441)
T d1qnia2 73 HISMTDGRYDGKYL-FINDKAN---TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD 148 (441)
T ss_dssp EEEEETTEEEEEEE-EEEETTT---TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred CcceecccCCCCEE-EEEcCCC---CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccc
Confidence 34555568999987 4444433 4689999999986542 232 222357899999998876653322100 01111
Q ss_pred ccccC-CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 286 TTAHM-GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 286 ~~~~~-~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.+... ...+-..+..+.....++.. ...+ ..+.++|||+|+++....
T Consensus 149 ~~~~~~~~~~~~iD~~t~~v~~qI~v--~~~p---~~v~~spdGk~a~vt~~n 196 (441)
T d1qnia2 149 FSLDNSYTMFTAIDAETMDVAWQVIV--DGNL---DNTDADYTGKYATSTCYN 196 (441)
T ss_dssp CCGGGEEEEEEEEETTTCSEEEEEEE--SSCC---CCEEECSSSSEEEEEESC
T ss_pred cccccccceEEeecCccceeeEEEec--CCCc---cceEECCCCCEEEEEecC
Confidence 00111 11122233333211111111 1222 357899999999887643
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.21 E-value=0.053 Score=54.01 Aligned_cols=250 Identities=13% Similarity=0.074 Sum_probs=121.9
Q ss_pred CeEEEEEEcCC---CCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCC
Q psy2521 168 NNYFYFHNKGL---QNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDT 244 (783)
Q Consensus 168 ~~~yy~~~~~~---~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~t 244 (783)
+.+|+...... .....|++.+..++..+++..+..-...+ .-.++.++|||++|... +.. ..|.++|.++
T Consensus 29 G~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g--~P~Gl~~~~dg~~l~va-d~~----~~i~~~~~~g 101 (314)
T d1pjxa_ 29 GDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGG--IPAGCQCDRDANQLFVA-DMR----LGLLVVQTDG 101 (314)
T ss_dssp SCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEEC--CEEEEEECSSSSEEEEE-ETT----TEEEEEETTS
T ss_pred CCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCC--cceeEEEeCCCCEEEEE-ECC----CeEEEEeCCC
Confidence 35666543321 11235787776556666655543221111 13578999999977554 321 2488899887
Q ss_pred Ccccccc--ccccc---cCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeE
Q psy2521 245 GKDYPEV--LKNVK---FPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLG 319 (783)
Q Consensus 245 g~~~~~~--~~~~~---~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~ 319 (783)
+...... ..+.. ...+++.+|| .||++.....................||+.+.+. +...+...-. .-
T Consensus 102 ~~~~~~~~~~~g~~~~~pndl~~d~~G-~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg---~~~~~~~~~~---~p 174 (314)
T d1pjxa_ 102 TFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG---QMIQVDTAFQ---FP 174 (314)
T ss_dssp CEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS---CEEEEEEEES---SE
T ss_pred cEEEEEeccccccccCCCcEEEECCCC-CEEEecCccCcccccccceeccCCceEEEEeecC---ceeEeeCCcc---ee
Confidence 6532211 11111 2457888888 5777652211000000000112234677775432 1222222111 12
Q ss_pred EEEEEecCCc----EEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee---cCccceeE---EEEeeCCEEEEEEC
Q psy2521 320 LHSEVTDCGR----YLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI---PGMDHHHE---IIANNGPELIVKTT 389 (783)
Q Consensus 320 ~~~~~SpDGk----~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~---~~~~~~~~---~~s~dg~~l~~~t~ 389 (783)
.++.|+||+. +|++.. ....+||.+|+.. ...+. ...+. ........ .++.+|. ||+...
T Consensus 175 NGi~~~~d~d~~~~~lyv~d---~~~~~i~~~d~~~--~g~~~----~~~~~~~~~~~~~~~pdGiavD~~Gn-lyVa~~ 244 (314)
T d1pjxa_ 175 NGIAVRHMNDGRPYQLIVAE---TPTKKLWSYDIKG--PAKIE----NKKVWGHIPGTHEGGADGMDFDEDNN-LLVANW 244 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEE---TTTTEEEEEEEEE--TTEEE----EEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEE
T ss_pred eeeEECCCCCcceeEEEEEe---ecccceEEeeccC--ccccc----eeeEEEEccccccccceeeEEecCCc-EEEEEc
Confidence 4678998764 444432 2347899888754 11111 11111 11111111 3666664 666432
Q ss_pred CCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEee-CCEEEEEEecCCeeEEEEEEC
Q psy2521 390 KNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVA-NNKLIVHYIQNVRSVMDLHDL 450 (783)
Q Consensus 390 ~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~-g~~l~~~~~~~g~~~l~~~dl 450 (783)
. ..+|++++.+++. ....++-. ......+.+.. ++.||++...+ .+|+++++
T Consensus 245 ~---~g~I~~~dp~~g~---~~~~i~~p-~~~~t~~afg~d~~~lyVt~~~~--g~i~~~~~ 297 (314)
T d1pjxa_ 245 G---SSHIEVFGPDGGQ---PKMRIRCP-FEKPSNLHFKPQTKTIFVTEHEN--NAVWKFEW 297 (314)
T ss_dssp T---TTEEEEECTTCBS---CSEEEECS-SSCEEEEEECTTSSEEEEEETTT--TEEEEEEC
T ss_pred C---CCEEEEEeCCCCE---EEEEEECC-CCCEEEEEEeCCCCEEEEEECCC--CcEEEEEC
Confidence 2 3579999987654 22223221 12223344433 34688876655 47787776
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.08 E-value=0.01 Score=60.93 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=63.6
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECC-CCccccc-----cccccccCeeEEeeCCCEEEEEEeecCCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVD-TGKDYPE-----VLKNVKFPSISWTHDHKGFFYNQYCDINGTADGT 284 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~-tg~~~~~-----~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~ 284 (783)
..++.+||||++|+.. +. |.+ .|++++.. +|..... ...+....+++|+|||+.+|.+..
T Consensus 147 ~h~v~~sPdG~~l~v~-d~-g~d--~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e---------- 212 (365)
T d1jofa_ 147 IHGMVFDPTETYLYSA-DL-TAN--KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME---------- 212 (365)
T ss_dssp EEEEEECTTSSEEEEE-ET-TTT--EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET----------
T ss_pred ceEEEECCCCCEEEEe-eC-CCC--EEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEecc----------
Confidence 4578999999998654 43 443 46666543 3332211 111222346899999997766551
Q ss_pred cccccCCceEEEEEcCCCCCCceeEEe-c--------------CCCCeeEEEEEEecCCcEEEEEEecCCCC---cEEEE
Q psy2521 285 ETTAHMGQKIYYHVLGTEQDKDIPVVE-F--------------PNGRSLGLHSEVTDCGRYLLVSTSNNTQG---SDLHY 346 (783)
Q Consensus 285 ~~~~~~~~~v~~~~lgt~~~~d~~v~~-~--------------~~~~~~~~~~~~SpDGk~l~~~~~~~~~~---~~l~~ 346 (783)
...+|..+++.+.......... . .........+.+||||++|+.. +++.+. ..|..
T Consensus 213 -----~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvs-nr~~~~~~~~~i~~ 286 (365)
T d1jofa_ 213 -----AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS-SRANKFELQGYIAG 286 (365)
T ss_dssp -----TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE-EEESSTTSCCEEEE
T ss_pred -----CCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEE-cccCCCccceEEEE
Confidence 1235666666543222111000 0 0011123467899999998765 332222 34555
Q ss_pred EECCC
Q psy2521 347 FDLHS 351 (783)
Q Consensus 347 ~dl~~ 351 (783)
+++..
T Consensus 287 ~~~~~ 291 (365)
T d1jofa_ 287 FKLRD 291 (365)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 55543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.07 E-value=0.008 Score=62.90 Aligned_cols=105 Identities=12% Similarity=0.013 Sum_probs=61.8
Q ss_pred CcEEeCCeEEEEEEcCCCCeeEEEEEeCCCCCeEEEeC-CCCcCCCCcEEEeeEEECCCCcEEEEEEecC--------C-
Q psy2521 162 APQRQENNYFYFHNKGLQNHSILYVQRNLTGSTEVFLD-PNKLSKDGTTALKLYAFSDNGKHFAYCLSKS--------G- 231 (783)
Q Consensus 162 ~p~~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD-~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~--------G- 231 (783)
..++||.|+|..-+. ...+-+.+..+.+....+. |+.- ...+.++||||+++....... |
T Consensus 78 ~gtpDGr~lfV~d~~----~~rVavIDl~t~k~~~ii~iP~g~------gphgi~~spdg~t~YV~~~~~~~v~~~~dg~ 147 (441)
T d1qnia2 78 DGRYDGKYLFINDKA----NTRVARIRLDIMKTDKITHIPNVQ------AIHGLRLQKVPKTNYVFCNAEFVIPQPNDGT 147 (441)
T ss_dssp TTEEEEEEEEEEETT----TTEEEEEETTTTEEEEEEECTTCC------CEEEEEECCSSBCCEEEEEECSCEESSCSSS
T ss_pred cccCCCCEEEEEcCC----CCEEEEEECCCCcEeeEEecCCCC------CccceEEeccCCEEEEEeccCCcccccCccc
Confidence 346788777665432 2445565554544443333 4432 266789999999543322110 1
Q ss_pred -----CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeec
Q psy2521 232 -----SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCD 276 (783)
Q Consensus 232 -----~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~ 276 (783)
.....+.++|.++.+......-+.....+.|+|||+++|.+..+.
T Consensus 148 ~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~ns 197 (441)
T d1qnia2 148 DFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNS 197 (441)
T ss_dssp CCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCT
T ss_pred ccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCC
Confidence 112345678988877653322233446899999999999887654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.93 E-value=0.083 Score=52.61 Aligned_cols=203 Identities=12% Similarity=0.115 Sum_probs=104.2
Q ss_pred eEEEEEEcCCCCeeEEEEEeCCCCCeEEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCC---ceEEEEEEECCCC
Q psy2521 169 NYFYFHNKGLQNHSILYVQRNLTGSTEVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGS---DWNTLHIKDVDTG 245 (783)
Q Consensus 169 ~~yy~~~~~~~~~~~l~~~~~~~g~~~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~---d~~~i~v~Dl~tg 245 (783)
++|.....+......++..+..++....+++... ......+..+.|||+ |.+ .+..+. ....++.++.+++
T Consensus 94 ~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~nd~~~d~~G~-l~v-td~~~~~~~~~g~v~~~~~dg~ 167 (319)
T d2dg1a1 94 RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS----TAYCIDDMVFDSKGG-FYF-TDFRGYSTNPLGGVYYVSPDFR 167 (319)
T ss_dssp CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS----SCCCEEEEEECTTSC-EEE-EECCCBTTBCCEEEEEECTTSC
T ss_pred CEEEEecCCCccceeEEEEcCCCceeeeeccCCC----cccCCcceeEEeccc-eee-cccccccccCcceeEEEecccc
Confidence 4555443322233445555443334343333211 123467889999998 333 333222 2356888888776
Q ss_pred ccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCcee----EEecCCCCeeEEE
Q psy2521 246 KDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIP----VVEFPNGRSLGLH 321 (783)
Q Consensus 246 ~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~----v~~~~~~~~~~~~ 321 (783)
........-....+++|+||++.||++.. ..++|+++++......... +.........-.+
T Consensus 168 ~~~~~~~~~~~pnGia~s~dg~~lyvad~---------------~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdG 232 (319)
T d2dg1a1 168 TVTPIIQNISVANGIALSTDEKVLWVTET---------------TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDS 232 (319)
T ss_dssp CEEEEEEEESSEEEEEECTTSSEEEEEEG---------------GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEE
T ss_pred eeEEEeeccceeeeeeeccccceEEEecc---------------cCCceEEEEEcCCCceeccccceeeeccCCccceee
Confidence 54322111111247999999999988862 2347888887654322111 1111111111246
Q ss_pred EEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceee-ecCc------cceeEEEEeeCCEEEEEECCC--C
Q psy2521 322 SEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTV-IPGM------DHHHEIIANNGPELIVKTTKN--A 392 (783)
Q Consensus 322 ~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l-~~~~------~~~~~~~s~dg~~l~~~t~~~--~ 392 (783)
+++.+||+ |.+... ....|++++.++ . . ...+ +... ......+.++++.+++.+... .
T Consensus 233 l~vD~~G~-l~Va~~---~~g~V~~~~p~G-~--~------l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~ 299 (319)
T d2dg1a1 233 CCIDSDDN-LYVAMY---GQGRVLVFNKRG-Y--P------IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMG 299 (319)
T ss_dssp EEEBTTCC-EEEEEE---TTTEEEEECTTS-C--E------EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGT
T ss_pred eeEcCCCC-EEEEEc---CCCEEEEECCCC-c--E------EEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcCCCCcC
Confidence 78889997 333332 236888888654 1 1 1111 1111 111124667777777766432 3
Q ss_pred CCceEEEEcCCCC
Q psy2521 393 PKGKVVTINLNNP 405 (783)
Q Consensus 393 ~~~~L~~~d~~~~ 405 (783)
..+.||+++....
T Consensus 300 ~~g~l~~~~~~~~ 312 (319)
T d2dg1a1 300 GGSMLYTVNGFAK 312 (319)
T ss_dssp CCEEEEEEECSSC
T ss_pred CceeEEEEeCCCc
Confidence 3567999887543
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=96.89 E-value=0.1 Score=50.95 Aligned_cols=196 Identities=11% Similarity=0.119 Sum_probs=104.2
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
..++|+||++.|+-... ...|.+|++.+.. .+..+.... .....+.|+|||++++.....
T Consensus 59 ~~l~~s~~~~~l~sgs~----------------Dg~v~iWd~~~~~--~~~~~~~~~--~~v~~v~~~~~~~~l~~~~~d 118 (340)
T d1tbga_ 59 YAMHWGTDSRLLVSASQ----------------DGKLIIWDSYTTN--KVHAIPLRS--SWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp EEEEECTTSSEEEEEET----------------TTEEEEEETTTTE--EEEEEECSC--SCEEEEEECTTSSEEEEEETT
T ss_pred EEEEECCCCCEEEEEEC----------------CCceeeeecccce--eEEEEeccc--ccEEeeEeeccceeeeeeccc
Confidence 57899999997765542 2368888887642 222333322 245688999999998865433
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee-EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecC
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH-EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPE 416 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~ 416 (783)
..+.+++...... .........+..... ......+..+...... ............ .......
T Consensus 119 ----~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~ 182 (340)
T d1tbga_ 119 ----NICSIYNLKTREG-----NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGD----TTCALWDIETGQ---QTTTFTG 182 (340)
T ss_dssp ----CCEEEEESSSSCS-----CCCEEEEECCCSSCEEEEEEEETTEEEEEETT----TEEEEEETTTTE---EEEEEEC
T ss_pred ----ceeeccccccccc-----ccccceeccccccccccccccccccccccccc----cccccccccccc---ccccccc
Confidence 4566666554210 011111111111111 1233333444433221 123333332221 1111122
Q ss_pred CCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 417 DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 417 ~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
....+. .........+++....++ .|.+||+.+++.+..+....+.|..+.+++++..++.. +. -..+..+|+
T Consensus 183 ~~~~~~-~~~~~~~~~~~~~~~~d~--~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~-s~---d~~i~~~~~ 255 (340)
T d1tbga_ 183 HTGDVM-SLSLAPDTRLFVSGACDA--SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG-SD---DATCRLFDL 255 (340)
T ss_dssp CSSCEE-EEEECTTSSEEEEEETTT--EEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE-ET---TSCEEEEET
T ss_pred cceeEe-eeccccccceeEEeecCc--eEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEE-eC---CCeEEEEee
Confidence 212222 233333356666666664 68889998888877777666667778888887765533 22 246888888
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.87 E-value=0.0058 Score=63.24 Aligned_cols=117 Identities=12% Similarity=0.060 Sum_probs=70.4
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc-----ccc--ccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-----VLK--NVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-----~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
+..++||||| +|| +.+ ....|++||+.+++.+.. +.. ......++|+|||+.|+-...|..
T Consensus 187 ~~~v~~s~dg-~la-sgs----~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t------ 254 (393)
T d1sq9a_ 187 ATSVDISERG-LIA-TGF----NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS------ 254 (393)
T ss_dssp CCEEEECTTS-EEE-EEC----TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT------
T ss_pred EEEEEECCCC-EEE-EEe----CCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCC------
Confidence 3457899999 444 322 235799999999875421 111 112357899999998877664321
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEec-----------CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEF-----------PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~-----------~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...+.++++.+.... ..+.. ..+......+.|||||++|+-.. ....|.++|+++|
T Consensus 255 -------~~~i~lwd~~~g~~~--~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s----~D~~v~vWd~~~g 321 (393)
T d1sq9a_ 255 -------FGCITLYETEFGERI--GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG----WDGKLRFWDVKTK 321 (393)
T ss_dssp -------EEEEEEEETTTCCEE--EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE----TTSEEEEEETTTT
T ss_pred -------cceeeecccccceee--eeeccccccccceeeeecccCceeeeccCCCCCeeEEEC----CCCEEEEEECCCC
Confidence 124556666554211 11110 01223456889999999886332 2368999999885
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.76 E-value=0.26 Score=47.28 Aligned_cols=202 Identities=10% Similarity=0.058 Sum_probs=120.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCccccc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTETTAH 289 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~ 289 (783)
+.++.+.+..++|.|+ +..+ ..|+..+++++........+ ....+++...-++.||++..
T Consensus 38 ~~~ld~D~~~~~iyws-d~~~---~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~--------------- 98 (263)
T d1npea_ 38 IIGLAFDCVDKVVYWT-DISE---PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS--------------- 98 (263)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET---------------
T ss_pred EEEEEEEeCCCEEEEE-ECCC---CeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEecc---------------
Confidence 4456777888888664 3322 36999999877643322121 12235555445778888762
Q ss_pred CCceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeec
Q psy2521 290 MGQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIP 368 (783)
Q Consensus 290 ~~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~ 368 (783)
...+|.+.++..... ..+... ... -.++.+.|.+.+|+++... .....|+.+++++.. ...++.
T Consensus 99 ~~~~I~~~~~dg~~~--~~l~~~~l~~---p~~l~vdp~~g~ly~t~~~-~~~~~I~r~~~dG~~---------~~~i~~ 163 (263)
T d1npea_ 99 QLDRIEVAKMDGTQR--RVLFDTGLVN---PRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTN---------RRILAQ 163 (263)
T ss_dssp TTTEEEEEETTSCSC--EEEECSSCSS---EEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCC---------CEEEEC
T ss_pred CCCEEEEEecCCceE--EEEecccccC---CcEEEEecccCcEEEeecC-CCCcEEEEecCCCCC---------ceeeee
Confidence 234788888765432 223322 222 2577889999998877543 234579999998721 122332
Q ss_pred C-ccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 369 G-MDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 369 ~-~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
. ...-.. .+++.+++||+... ....|.++++++.. .+.++... .... ++.+.+ ++||++.... ..|+
T Consensus 164 ~~~~~P~glaiD~~~~~lYw~d~---~~~~I~~~~~~g~~---~~~v~~~~-~~P~-~lav~~-~~lYwtd~~~--~~I~ 232 (263)
T d1npea_ 164 DNLGLPNGLTFDAFSSQLCWVDA---GTHRAECLNPAQPG---RRKVLEGL-QYPF-AVTSYG-KNLYYTDWKT--NSVI 232 (263)
T ss_dssp TTCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTEEE---EEEEEECC-CSEE-EEEEET-TEEEEEETTT--TEEE
T ss_pred ecccccceEEEeecCcEEEEEeC---CCCEEEEEECCCCC---eEEEECCC-CCcE-EEEEEC-CEEEEEECCC--CEEE
Confidence 2 111112 36777889998643 24579999998755 34455432 3332 455554 8888876544 4799
Q ss_pred EEECCCCceee
Q psy2521 447 LHDLNTGKRLH 457 (783)
Q Consensus 447 ~~dl~~G~~~~ 457 (783)
++|..+|+..+
T Consensus 233 ~~~~~~g~~~~ 243 (263)
T d1npea_ 233 AMDLAISKEMD 243 (263)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCccce
Confidence 99997787643
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.27 Score=46.28 Aligned_cols=226 Identities=11% Similarity=0.097 Sum_probs=111.6
Q ss_pred EECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceE
Q psy2521 215 AFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKI 294 (783)
Q Consensus 215 ~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v 294 (783)
++++||++||-+.. + ..|+|||+.+++.+.. +.+....-.+.++|++.|+-... ...+
T Consensus 20 c~~~d~~~l~sgs~-D----g~i~vWd~~~~~~~~~-l~~H~~~V~~v~~~~~~l~s~s~----------------D~~i 77 (293)
T d1p22a2 20 CLQYDDQKIVSGLR-D----NTIKIWDKNTLECKRI-LTGHTGSVLCLQYDERVIITGSS----------------DSTV 77 (293)
T ss_dssp EEECCSSEEEEEES-S----SCEEEEESSSCCEEEE-ECCCSSCEEEEECCSSEEEEEET----------------TSCE
T ss_pred EEEEcCCEEEEEeC-C----CeEEEEECCCCcEEEE-EecCCCCEeeeecccceeecccc----------------cccc
Confidence 57889998875433 2 4699999999986542 22211122344558876654441 2257
Q ss_pred EEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee
Q psy2521 295 YYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH 374 (783)
Q Consensus 295 ~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~ 374 (783)
.++++.+.... ....... . ......+....++..... ..+.+++..... ...............
T Consensus 78 ~~~~~~~~~~~--~~~~~~~-~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------~~~~~~~~~~~~~~v 141 (293)
T d1p22a2 78 RVWDVNTGEML--NTLIHHC-E---AVLHLRFNNGMMVTCSKD----RSIAVWDMASPT------DITLRRVLVGHRAAV 141 (293)
T ss_dssp EEEESSSCCEE--EEECCCC-S---CEEEEECCTTEEEEEETT----SCEEEEECSSSS------CCEEEEEECCCSSCE
T ss_pred ccccccccccc--ccccccc-c---ccccccccccceeecccc----cceeEeeccccc------ccccccccccccccc
Confidence 77777654321 1111111 1 123345555555543322 456666766521 001111112222222
Q ss_pred EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCc
Q psy2521 375 EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGK 454 (783)
Q Consensus 375 ~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~ 454 (783)
.........+...+. ...+..+|+.+.. ....+... ...+..+.. ++.. ++....++ .|.+||+.+++
T Consensus 142 ~~~~~~~~~~~~~s~----d~~i~~~d~~~~~---~~~~~~~~-~~~v~~~~~-~~~~-l~~~~~dg--~i~i~d~~~~~ 209 (293)
T d1p22a2 142 NVVDFDDKYIVSASG----DRTIKVWNTSTCE---FVRTLNGH-KRGIACLQY-RDRL-VVSGSSDN--TIRLWDIECGA 209 (293)
T ss_dssp EEEEEETTEEEEEET----TSEEEEEETTTCC---EEEEEECC-SSCEEEEEE-ETTE-EEEEETTS--CEEEEETTTCC
T ss_pred ccceecccccccccC----CCceeeecCCCCc---EEEEEccc-ccccccccC-CCCe-EEEecCCC--EEEEEecccce
Confidence 234445555554433 2457778887654 22222222 222333333 3344 44555554 58889998777
Q ss_pred eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 455 RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 455 ~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
.+.........+..++ .+...++ +.+. -..+..+|+
T Consensus 210 ~~~~~~~~~~~v~~~~--~~~~~l~-sg~~---dg~i~iwd~ 245 (293)
T d1p22a2 210 CLRVLEGHEELVRCIR--FDNKRIV-SGAY---DGKIKVWDL 245 (293)
T ss_dssp EEEEECCCSSCEEEEE--CCSSEEE-EEET---TSCEEEEEH
T ss_pred eeeeecccceeeeecc--ccceEEE-EEcC---CCEEEEEEC
Confidence 7666654433443433 3333333 3222 246778886
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.61 E-value=0.34 Score=46.68 Aligned_cols=206 Identities=13% Similarity=0.204 Sum_probs=122.3
Q ss_pred eEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCc
Q psy2521 213 LYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQ 292 (783)
Q Consensus 213 ~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~ 292 (783)
+.-..|..+-||.-. | ..|.++|+++++.+....-....-.-.|- +.+.|.++. ..
T Consensus 67 sAIMhP~~~IiALra---g---~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lVT-----------------~t 122 (327)
T d1utca2 67 SAIMNPASKVIALKA---G---KTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVT-----------------DN 122 (327)
T ss_dssp EEEECSSSSEEEEEE---T---TEEEEEETTTTEEEEEEECSSCCCEEEES-SSSEEEEEC-----------------SS
T ss_pred hhhcCCCCcEEEEec---C---CeEEEEehhHhhhhceEEcCCCcEEEEec-CCCEEEEEc-----------------CC
Confidence 456779999888765 3 47999999999876533222222355784 667888887 23
Q ss_pred eEEEEEcCCCCCCceeEEecCCC--CeeEEEEEEecCCcEEEEEEecCCCC---cEEEEEECCCCCCCcccCCCCceeee
Q psy2521 293 KIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSEVTDCGRYLLVSTSNNTQG---SDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 293 ~v~~~~lgt~~~~d~~v~~~~~~--~~~~~~~~~SpDGk~l~~~~~~~~~~---~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
.||-|++... .+.+.+|+.... ..-..+...++|+||+++..-...+. ..+-++..+.+ ..+.+
T Consensus 123 aVYHW~~~g~-s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~----------~sQ~i 191 (327)
T d1utca2 123 AVYHWSMEGE-SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------VSQPI 191 (327)
T ss_dssp EEEEEESSSS-CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT----------EEEEE
T ss_pred ceEEEcccCC-CCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC----------cCccc
Confidence 7999999543 456778876431 12356889999999998865432221 44555555542 33455
Q ss_pred cCccceeEEEEeeC----CEEEEEECCCCCCceEEEEcCCCCCC--C----CcEEe-ecCC--CCceEEEEEEeeCCEEE
Q psy2521 368 PGMDHHHEIIANNG----PELIVKTTKNAPKGKVVTINLNNPCE--K----NWKTL-IPED--ENRTLDVVAAVANNKLI 434 (783)
Q Consensus 368 ~~~~~~~~~~s~dg----~~l~~~t~~~~~~~~L~~~d~~~~~~--~----~~~~l-i~~~--~~~~l~~~~~~~g~~l~ 434 (783)
.+..+....+--+| ..|+...+++....+|..+++..+.. . +..++ +|+. .+-.+ .+.....-.++
T Consensus 192 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPv-amqvs~kygii 270 (327)
T d1utca2 192 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVV 270 (327)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEE-EEEEETTTTEE
T ss_pred cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEE-EEEeeccCCEE
Confidence 55555444343333 24655666666668999999876321 1 11222 2332 12222 23333323455
Q ss_pred EEEecCCeeEEEEEECCCCcee
Q psy2521 435 VHYIQNVRSVMDLHDLNTGKRL 456 (783)
Q Consensus 435 ~~~~~~g~~~l~~~dl~~G~~~ 456 (783)
+.-.+.| -|++||+++|..+
T Consensus 271 yviTK~G--~i~lyDleTgt~i 290 (327)
T d1utca2 271 FLITKYG--YIHLYDLETGTCI 290 (327)
T ss_dssp EEEETTS--EEEEEETTTCCEE
T ss_pred EEEecCc--EEEEEEcccccEE
Confidence 5555554 6889999988753
|
| >d1mo2a_ c.69.1.22 (A:) Erythromycin polyketide synthase {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases domain: Erythromycin polyketide synthase species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.48 E-value=0.0044 Score=60.32 Aligned_cols=100 Identities=18% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCccEEEEecCCCCCccCCcCcHHHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHH-HHHHHHcCC
Q psy2521 553 RRNPVIIYGYGGYGVSVLPTFSISRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAA-AEYMINKKY 631 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~-~~~l~~~~~ 631 (783)
...|.|+++||.++......|.. +...|.. .+.|+.++.+|.+. + .....+++++.+. ++.+.+.
T Consensus 40 ~~~~~l~c~~~~~~gg~~~~y~~-La~~L~~-~~~V~al~~pG~~~-~---------e~~~~s~~~~a~~~~~~i~~~-- 105 (255)
T d1mo2a_ 40 PGEVTVICCAGTAAISGPHEFTR-LAGALRG-IAPVRAVPQPGYEE-G---------EPLPSSMAAVAAVQADAVIRT-- 105 (255)
T ss_dssp SCSSEEEEECCCSSSCSGGGGHH-HHHHHTT-TCCEEEECCTTSST-T---------CCEESSHHHHHHHHHHHHHHT--
T ss_pred CCCCeEEEECCCCCCCCHHHHHH-HHHhcCC-CceEEEEeCCCcCC-C---------CCCCCCHHHHHHHHHHHHHHh--
Confidence 45689999998543332233443 4455653 68899999998331 1 1112345665554 3444443
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhcC---CCceeEEEEc
Q psy2521 632 TKPKYITIMGGSNGGLLVGACLNQR---PELYGAALIL 666 (783)
Q Consensus 632 ~d~~ri~i~G~S~GG~l~~~~~~~~---p~lf~a~i~~ 666 (783)
.....+.|+|||+||.++..++.+. .+....++..
T Consensus 106 ~~~~P~~L~GhS~Gg~vA~e~A~~l~~~g~~v~~lvll 143 (255)
T d1mo2a_ 106 QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLI 143 (255)
T ss_dssp TSSSCEEEEECSTTHHHHHHHHHHHHHHTCCCSEEEEE
T ss_pred CCCCCEEEEEeCCcHHHHHHHHHhhHhcCCCccEEEEE
Confidence 2235689999999999999888653 2334444443
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.36 E-value=0.0035 Score=64.94 Aligned_cols=105 Identities=12% Similarity=0.176 Sum_probs=64.8
Q ss_pred cEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccc--------------cccccCeeEEeeCCCEEEEEE
Q psy2521 208 TTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVL--------------KNVKFPSISWTHDHKGFFYNQ 273 (783)
Q Consensus 208 ~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~--------------~~~~~~~~~WspDg~~l~y~~ 273 (783)
.-.+..++|||||++|+-..+.+. ...|++||+++|+.+.... .......++|+|||+.|+-..
T Consensus 231 ~~~V~~l~~spdg~~l~sgs~D~t--~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s 308 (393)
T d1sq9a_ 231 SNSIRSVKFSPQGSLLAIAHDSNS--FGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308 (393)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETT--EEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred cceEEEcccccccceeeeecCCCC--cceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEEC
Confidence 345888999999999987765321 2579999999987543110 111235789999999776444
Q ss_pred eecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCe--eEEEEEEecCCcEEE
Q psy2521 274 YCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRS--LGLHSEVTDCGRYLL 332 (783)
Q Consensus 274 ~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~--~~~~~~~SpDGk~l~ 332 (783)
....|.+|++.+++ -+.++..-.+.. ....+.++|+|+.++
T Consensus 309 ----------------~D~~v~vWd~~~g~--~~~~l~gH~~~v~~~~~~~~~~~~~~~~~ 351 (393)
T d1sq9a_ 309 ----------------WDGKLRFWDVKTKE--RITTLNMHCDDIEIEEDILAVDEHGDSLA 351 (393)
T ss_dssp ----------------TTSEEEEEETTTTE--EEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred ----------------CCCEEEEEECCCCC--EEEEECCcCCcccCCccEEEECCCCCEEE
Confidence 23478899987653 222333211110 012356889998764
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.30 E-value=0.14 Score=49.02 Aligned_cols=239 Identities=10% Similarity=0.047 Sum_probs=115.0
Q ss_pred EEeCCCCcCCCCcEEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEee
Q psy2521 196 VFLDPNKLSKDGTTALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYC 275 (783)
Q Consensus 196 ~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~ 275 (783)
.+.|.++....+.-.+..+.+++++..+..+ .+ .+++++++.+.+... ......+++|+..++...
T Consensus 34 ~~Wd~~~~~~~h~~~V~~~~~~~~~~~~s~s--~D----~~v~~w~~~~~~~~~------~~~~~~~~~~~~~~~~~~-- 99 (287)
T d1pgua2 34 MEWSSSSMHQDHSNLIVSLDNSKAQEYSSIS--WD----DTLKVNGITKHEFGS------QPKVASANNDGFTAVLTN-- 99 (287)
T ss_dssp EETTTTEEECCCCSCEEEEECCSTTCCEEEE--TT----TEEEETTEEEEECSS------CEEEEEECSSSEEEEEET--
T ss_pred EEEECCCCCCCCCCCEEEEEecCCCeEEEEe--ec----ccccccccccccccc------ceeeeeeccCCceEEEee--
Confidence 3445444333333446677888877644322 11 357776654432110 112456777765444322
Q ss_pred cCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCC
Q psy2521 276 DINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDG 355 (783)
Q Consensus 276 ~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~ 355 (783)
...+..+...+.. ....+... . ....++++++.+++.... .+.+.++++.+..
T Consensus 100 ---------------~~~~~~~~~~~~~--~~~~~~~~--~---~~~~~~~~~~~~~v~~~~---~~~v~~~~~~~~~-- 152 (287)
T d1pgua2 100 ---------------DDDLLILQSFTGD--IIKSVRLN--S---PGSAVSLSQNYVAVGLEE---GNTIQVFKLSDLE-- 152 (287)
T ss_dssp ---------------TSEEEEEETTTCC--EEEEEECS--S---CEEEEEECSSEEEEEETT---TSCEEEEETTEEE--
T ss_pred ---------------cccceeeecccee--eeeecccc--c---eeeeeeccCcceeeeccc---cceeeeeeccccc--
Confidence 1235555554432 11222211 1 124578899988876543 2467777775510
Q ss_pred cccCCCCceeeecCcccee-E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEE------
Q psy2521 356 KISGKFPLKTVIPGMDHHH-E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAA------ 427 (783)
Q Consensus 356 ~l~~~~~~~~l~~~~~~~~-~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~------ 427 (783)
. ...+........ . .|+|+|+.|+..+.. +.|..+|+.++.. ........ ...+..+.+
T Consensus 153 -----~-~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~~~--~~~~~~~h-~~~v~~~~~~p~~~~ 219 (287)
T d1pgua2 153 -----V-SFDLKTPLRAKPSYISISPSETYIAAGDVM----GKILLYDLQSREV--KTSRWAFR-TSKINAISWKPAEKG 219 (287)
T ss_dssp -----E-EEECSSCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTTEE--EECCSCCC-SSCEEEEEECCCC--
T ss_pred -----e-eeeeeeccCCceeEEEeccCcccccccccc----ccccceeeccccc--cccccccc-ccccceeeecccccc
Confidence 0 011111112212 2 489999887765432 3578888765431 00111111 112222221
Q ss_pred ----eeCCEEEEEEecCCeeEEEEEECCCCc-eeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEe
Q psy2521 428 ----VANNKLIVHYIQNVRSVMDLHDLNTGK-RLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCN 495 (783)
Q Consensus 428 ----~~g~~l~~~~~~~g~~~l~~~dl~~G~-~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d 495 (783)
..++.++++...|+ .|++||+.++. .+..+....+.|..+.+.+++ . +++.++. ..+..+|
T Consensus 220 ~~~~~~~~~~l~sgs~D~--~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~-l~s~g~D---~~v~iW~ 285 (287)
T d1pgua2 220 ANEEEIEEDLVATGSLDT--NIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-T-LVSSGAD---ACIKRWN 285 (287)
T ss_dssp ----CCSCCEEEEEETTS--CEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-E-EEEEETT---SCEEEEE
T ss_pred cccccCCCCeeEeecCCC--eEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-E-EEEEECC---CeEEEEE
Confidence 12244566666664 68889986543 333333334557777777664 3 4444332 3455554
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.24 E-value=0.26 Score=47.01 Aligned_cols=111 Identities=15% Similarity=0.095 Sum_probs=67.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
.....+++||..++...+ ..+.+++..+++.+...... ....+.+|+++.++....+
T Consensus 83 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~--------------- 139 (287)
T d1pgua2 83 PKVASANNDGFTAVLTND------DDLLILQSFTGDIIKSVRLN--SPGSAVSLSQNYVAVGLEE--------------- 139 (287)
T ss_dssp EEEEEECSSSEEEEEETT------SEEEEEETTTCCEEEEEECS--SCEEEEEECSSEEEEEETT---------------
T ss_pred eeeeeeccCCceEEEeec------ccceeeeccceeeeeecccc--ceeeeeeccCcceeeeccc---------------
Confidence 445778999987765422 24788898888765432222 2456788999888877622
Q ss_pred CceEEEEEcCCCCCCceeEEec-CCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCC
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEF-PNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSL 352 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~-~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g 352 (783)
...+..+++.... ..... .........+.|||||++|+..... ..|.++|+.++
T Consensus 140 ~~~v~~~~~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~d----g~i~i~d~~~~ 194 (287)
T d1pgua2 140 GNTIQVFKLSDLE----VSFDLKTPLRAKPSYISISPSETYIAAGDVM----GKILLYDLQSR 194 (287)
T ss_dssp TSCEEEEETTEEE----EEEECSSCCSSCEEEEEECTTSSEEEEEETT----SCEEEEETTTT
T ss_pred cceeeeeeccccc----eeeeeeeccCCceeEEEeccCcccccccccc----ccccceeeccc
Confidence 1235556653221 11111 1111224578899999998865432 57889998773
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.13 E-value=0.62 Score=44.54 Aligned_cols=206 Identities=8% Similarity=0.053 Sum_probs=117.3
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcc----ccccccc-cccCeeEEeeCCCEEEEEEeecCCCCCCCCc
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKD----YPEVLKN-VKFPSISWTHDHKGFFYNQYCDINGTADGTE 285 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~----~~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~ 285 (783)
..++.+.+..++|.|+ +... ..|+..++.+... ......+ ....+++.-+-++.||++..
T Consensus 32 ~~~id~d~~~~~lYw~-D~~~---~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~----------- 96 (266)
T d1ijqa1 32 VVALDTEVASNRIYWS-DLSQ---RMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDS----------- 96 (266)
T ss_dssp EEEEEEETTTTEEEEE-ETTT---TEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEET-----------
T ss_pred eEEEEEEeCCCEEEEE-ECCC---CEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEec-----------
Confidence 3467788889988665 3322 3577777654221 1111111 12245666566888988751
Q ss_pred ccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 286 TTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 286 ~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...+|.+.+++... ...++......| .++.+.|...+|.+.... ....|+.+++++. ....
T Consensus 97 ----~~~~I~v~~~~g~~-~~~~~~~~~~~P---~~l~vd~~~g~ly~~~~~--~~~~I~r~~~dGs---------~~~~ 157 (266)
T d1ijqa1 97 ----VLGTVSVADTKGVK-RKTLFRENGSKP---RAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGV---------DIYS 157 (266)
T ss_dssp ----TTTEEEEEETTSSS-EEEEEECTTCCE---EEEEEETTTTEEEEEECS--SSCEEEEEETTSC---------CEEE
T ss_pred ----CCCEEEeEecCCce-EEEEEcCCCCCc---ceEEEEcccCeEEEeccC--CCcceeEeccCCC---------ceec
Confidence 23478888887543 222333322323 567889988888876432 3368999999872 1223
Q ss_pred eecCc-cceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCC-ceEEEEEEeeCCEEEEEEecCCe
Q psy2521 366 VIPGM-DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDEN-RTLDVVAAVANNKLIVHYIQNVR 442 (783)
Q Consensus 366 l~~~~-~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~-~~l~~~~~~~g~~l~~~~~~~g~ 442 (783)
++... ..... .+++.+++||+.-. ....|.++++++.. .+.++..... ....++.+.+ ++||++....
T Consensus 158 l~~~~~~~p~gl~iD~~~~~lYw~d~---~~~~I~~~~~dG~~---~~~~~~~~~~~~~p~~lav~~-~~ly~td~~~-- 228 (266)
T d1ijqa1 158 LVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN-- 228 (266)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETTT--
T ss_pred ccccccceeeEEEeeccccEEEEecC---CcCEEEEEECCCCC---EEEEEeCCCcccccEEEEEEC-CEEEEEECCC--
Confidence 33221 11111 47777899998643 34679999998765 2444433211 1122455554 8999876544
Q ss_pred eEEEEEECCCCceeeee
Q psy2521 443 SVMDLHDLNTGKRLHSF 459 (783)
Q Consensus 443 ~~l~~~dl~~G~~~~~l 459 (783)
..|++.+..+|+..+.+
T Consensus 229 ~~I~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 229 EAIFSANRLTGSDVNLL 245 (266)
T ss_dssp TEEEEEETTTCCCCEEE
T ss_pred CeEEEEECCCCcceEEE
Confidence 57888888777654333
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.11 E-value=0.26 Score=48.18 Aligned_cols=191 Identities=10% Similarity=0.041 Sum_probs=93.7
Q ss_pred CeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 258 PSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 258 ~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
.+++++|||+ ||++.. ...+|++++-+. +...+...+. ...++++++||+.++. ...
T Consensus 31 e~iAv~pdG~-l~vt~~---------------~~~~I~~i~p~g---~~~~~~~~~~---~~~gla~~~dG~l~v~-~~~ 87 (302)
T d2p4oa1 31 ENLASAPDGT-IFVTNH---------------EVGEIVSITPDG---NQQIHATVEG---KVSGLAFTSNGDLVAT-GWN 87 (302)
T ss_dssp EEEEECTTSC-EEEEET---------------TTTEEEEECTTC---CEEEEEECSS---EEEEEEECTTSCEEEE-EEC
T ss_pred CCEEECCCCC-EEEEeC---------------CCCEEEEEeCCC---CEEEEEcCCC---CcceEEEcCCCCeEEE-ecC
Confidence 4789999996 766652 234788876443 2233333332 3467899999995443 322
Q ss_pred CCCCcEEEEEECCCCCCCcccCCCCceeeecCcccee--E-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEee
Q psy2521 338 NTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHH--E-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLI 414 (783)
Q Consensus 338 ~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~--~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li 414 (783)
. ..++.++..... . ....+........ . .+.++| .+|+... .+.++++++..++. ..+.
T Consensus 88 ~---~~~~~~~~~~~~-~------~~~~~~~~~~~~~~n~i~~~~~g-~~~v~~~---~~~~i~~~~~~~~~----~~~~ 149 (302)
T d2p4oa1 88 A---DSIPVVSLVKSD-G------TVETLLTLPDAIFLNGITPLSDT-QYLTADS---YRGAIWLIDVVQPS----GSIW 149 (302)
T ss_dssp T---TSCEEEEEECTT-S------CEEEEEECTTCSCEEEEEESSSS-EEEEEET---TTTEEEEEETTTTE----EEEE
T ss_pred C---ceEEEEEecccc-c------ceeeccccCCccccceeEEccCC-CEEeecc---ccccceeeeccCCc----ceeE
Confidence 2 345555544311 0 1112221111111 1 355665 5555432 34578888876643 1111
Q ss_pred cC----------CCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceeeeecC--CCeEEEeeeccccccEEEEEE
Q psy2521 415 PE----------DENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLHSFPL--DLGQITHISGRRKYNEVFYGF 482 (783)
Q Consensus 415 ~~----------~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~--~~g~v~~~s~~~d~~~l~~~~ 482 (783)
.. ........+.. +++.+++..... .+|++++............ ..+...++..+++++ +|+.-
T Consensus 150 ~~~~~~~~~~~~~~~~~~ngi~~-~~~~l~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~-l~va~ 225 (302)
T d2p4oa1 150 LEHPMLARSNSESVFPAANGLKR-FGNFLYVSNTEK--MLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN-LYGAT 225 (302)
T ss_dssp EECGGGSCSSTTCCSCSEEEEEE-ETTEEEEEETTT--TEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-EEEEC
T ss_pred ecCCccceeeccCcccccccccc-cCCceeeecCCC--CeEEeccccccccccccccccCCCCCcceEECCCCC-EEEEE
Confidence 11 10111233443 447777766654 5788888743222111100 011122344556664 55543
Q ss_pred ecCCCCceEEEEeC
Q psy2521 483 TSFLQPGTIYHCNI 496 (783)
Q Consensus 483 ss~~~P~~vy~~d~ 496 (783)
.. -.+|++++.
T Consensus 226 ~~---~~~V~~i~p 236 (302)
T d2p4oa1 226 HI---YNSVVRIAP 236 (302)
T ss_dssp BT---TCCEEEECT
T ss_pred cC---CCcEEEECC
Confidence 33 247899987
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.05 E-value=0.69 Score=44.35 Aligned_cols=223 Identities=9% Similarity=0.040 Sum_probs=109.0
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccc--cc---c--ccccCeeEEeeCCCEEEEEEeecCCCCCCC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE--VL---K--NVKFPSISWTHDHKGFFYNQYCDINGTADG 283 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~--~~---~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~g 283 (783)
-.+++++|||+ +|..+.. + ..|+++|.++ +.+.. +. . ......+++.++....++...
T Consensus 25 P~gvavd~dg~--i~VaD~~-n--~rI~v~d~~G-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--------- 89 (279)
T d1q7fa_ 25 PSGVAVNAQND--IIVADTN-N--HRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTER--------- 89 (279)
T ss_dssp EEEEEECTTCC--EEEEEGG-G--TEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEEC---------
T ss_pred ccEEEEcCCCC--EEEEECC-C--CEEEEEeCCC-CEEEEecccCCCcccccccccccccccccccceecc---------
Confidence 46789999998 4555542 2 5688999764 32211 00 0 011123455545444444441
Q ss_pred CcccccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCc
Q psy2521 284 TETTAHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPL 363 (783)
Q Consensus 284 ~~~~~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~ 363 (783)
.....|.+.+... .....+.... .....+++..++|+.++... ....+++++.++. . .
T Consensus 90 -----~~~~~i~~~~~~g---~~~~~~~~~~-~~~p~~~avd~~G~i~v~~~----~~~~~~~~~~~g~---~------~ 147 (279)
T d1q7fa_ 90 -----SPTHQIQIYNQYG---QFVRKFGATI-LQHPRGVTVDNKGRIIVVEC----KVMRVIIFDQNGN---V------L 147 (279)
T ss_dssp -----GGGCEEEEECTTS---CEEEEECTTT-CSCEEEEEECTTSCEEEEET----TTTEEEEECTTSC---E------E
T ss_pred -----CCccccccccccc---cceeecCCCc-ccccceeccccCCcEEEEee----ccceeeEeccCCc---e------e
Confidence 1123555554321 1122222211 11235677888898655321 2357788776551 0 1
Q ss_pred eeee--cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC
Q psy2521 364 KTVI--PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN 440 (783)
Q Consensus 364 ~~l~--~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~ 440 (783)
...- ........ .++++| .+|+.... +..|+.++.++.. +..+-.........++.+..++.|++....+
T Consensus 148 ~~~g~~~~~~~~~~i~~d~~g-~i~v~d~~---~~~V~~~d~~G~~---~~~~g~~g~~~~P~giavD~~G~i~Vad~~~ 220 (279)
T d1q7fa_ 148 HKFGCSKHLEFPNGVVVNDKQ-EIFISDNR---AHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHN 220 (279)
T ss_dssp EEEECTTTCSSEEEEEECSSS-EEEEEEGG---GTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred ecccccccccccceeeeccce-eEEeeecc---ccceeeeecCCce---eeeecccccccCCcccccccCCeEEEEECCC
Confidence 1110 11111111 244544 56665433 4568888876532 2333222222223455554446677764332
Q ss_pred CeeEEEEEECCCCceeeeecCC--CeEEEeeeccccccEEEE
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLD--LGQITHISGRRKYNEVFY 480 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~--~g~v~~~s~~~d~~~l~~ 480 (783)
..+|.+++. +|+.++.+..+ .+...++...+++ .+++
T Consensus 221 -~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG-~l~V 259 (279)
T d1q7fa_ 221 -NFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG-SVVL 259 (279)
T ss_dssp -SCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT-EEEE
T ss_pred -CcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCC-cEEE
Confidence 346889987 79876666433 2233455556665 3544
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=96.00 E-value=0.53 Score=42.59 Aligned_cols=204 Identities=10% Similarity=0.013 Sum_probs=112.8
Q ss_pred CCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEEEE
Q psy2521 219 NGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYYHV 298 (783)
Q Consensus 219 DG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~~~ 298 (783)
|+..|.|.....|. ..++++ .+|+.+.++.+.+. ....=-+.=..+.|.+--.. ....+.+|..+
T Consensus 24 ~~d~ll~~~~seG~--vni~~l--~g~~~vkLtkePI~-~~~~Pk~~ldfi~f~RDV~k----------GkE~Hai~~~N 88 (313)
T d2hu7a1 24 DGDKLLVVGFSEGS--VNAYLY--DGGETVKLNREPIN-SVLDPHYGVGRVILVRDVSK----------GAEQHALFKVN 88 (313)
T ss_dssp TTTEEEEEEEETTE--EEEEEE--SSSSCEECCSSCCS-EECEECTTBSEEEEEEECST----------TSCCEEEEEEE
T ss_pred cCCcEEEEEeccce--EEEEEE--eCCEEEEEeccccc-CcCCCccCcceEEEEeehhc----------CcceeeEEEEc
Confidence 45545555544454 456655 57777666655542 11111122257888883221 23457888888
Q ss_pred cCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCccceeEEE-
Q psy2521 299 LGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGMDHHHEII- 377 (783)
Q Consensus 299 lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~~~~~~~~- 377 (783)
+..+..+..+ +.+. +... ....-|++.++|.... .+...+|+++-.+ .+.+.. -..+.++
T Consensus 89 lk~~GEE~~i--~spk-~vRI--~S~~yddk~vvF~Gas-ed~~~LYviegGk-----------lrkL~~--vPpFsFVt 149 (313)
T d2hu7a1 89 TSRPGEEQRL--EAVK-PMRI--LSGVDTGEAVVFTGAT-EDRVALYALDGGG-----------LRELAR--LPGFGFVS 149 (313)
T ss_dssp TTSTTCEEEC--TTSC-SBEE--EEEEECSSCEEEEEEC-SSCEEEEEEETTE-----------EEEEEE--ESSCEEEE
T ss_pred cCCCCeeeEe--cCCc-eEEE--EEeeecCceEEEeccc-CCceEEEEEeCCc-----------eeeecc--CCCcceEE
Confidence 8755443222 1121 2222 3455689999998765 3447778776433 223321 1112222
Q ss_pred EeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEECCCCceee
Q psy2521 378 ANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHDLNTGKRLH 457 (783)
Q Consensus 378 s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~dl~~G~~~~ 457 (783)
+-.|+.+.=+.--.+....++..|+.++. . +++++.++.+ .......|++++.-+..-+.+....+|+++++. .
T Consensus 150 DI~~d~I~G~g~~~g~~~sfF~adl~SG~---l-ri~tpkeGS~-~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~y-e 223 (313)
T d2hu7a1 150 DIRGDLIAGLGFFGGGRVSLFTSNLSSGG---L-RVFDSGEGSF-SSASISPGMKVTAGLETAREARLVTVDPRDGSV-E 223 (313)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTEE---E-EEECCSSEEE-EEEEECTTSCEEEEEEESSCEEEEEECTTTCCE-E
T ss_pred eccCCeEEEEeeecCCcceEEEEecccCC---E-EEecCCCCcc-cceeEccCceeeeccCCCCceEEEEEecccCce-e
Confidence 23466554333323334458889997666 3 4555553444 444555558887666677778777889987775 6
Q ss_pred eecCC
Q psy2521 458 SFPLD 462 (783)
Q Consensus 458 ~l~~~ 462 (783)
.+.+|
T Consensus 224 rve~P 228 (313)
T d2hu7a1 224 DLELP 228 (313)
T ss_dssp ECCCS
T ss_pred eeecC
Confidence 67776
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.87 E-value=0.81 Score=43.68 Aligned_cols=236 Identities=12% Similarity=0.099 Sum_probs=110.1
Q ss_pred EEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccc--cccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 210 ALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKN--VKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 210 ~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.+..++|+|++..++++.+..| .|+++++.++......... .......+.+++..++....
T Consensus 58 ~V~~v~f~~~~~~~l~sg~~d~----~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 120 (342)
T d1yfqa_ 58 PLLCCNFIDNTDLQIYVGTVQG----EILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW------------- 120 (342)
T ss_dssp CEEEEEEEESSSEEEEEEETTS----CEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEET-------------
T ss_pred CEEEEEEeCCCCCEEEEccccc----ceeeeeccccccccccccccccccccccccccccccccccc-------------
Confidence 3778899998776666655444 5899999887654322211 11123445566665554442
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCC--CeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCcee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNG--RSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKT 365 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~--~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~ 365 (783)
...+..+++.+.......+...... ........+++++..++..... ..+.++++..+... ....
T Consensus 121 ---~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~~~~------~~~~ 187 (342)
T d1yfqa_ 121 ---DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNN----SQVQWFRLPLCEDD------NGTI 187 (342)
T ss_dssp ---TSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEEST----TEEEEEESSCCTTC------CCEE
T ss_pred ---ccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeecCC----CcEEEEecccCccc------ceee
Confidence 1245555554332222222221110 0011234567788877765432 57888888763110 0111
Q ss_pred eecCcccee-E-EE-EeeCCEEEEEECCCCCCceEEEEcCCCCCC----CCcEEeec------CC-CCceEEEEEEeeCC
Q psy2521 366 VIPGMDHHH-E-II-ANNGPELIVKTTKNAPKGKVVTINLNNPCE----KNWKTLIP------ED-ENRTLDVVAAVANN 431 (783)
Q Consensus 366 l~~~~~~~~-~-~~-s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~----~~~~~li~------~~-~~~~l~~~~~~~g~ 431 (783)
......... . .+ ..++..+...+.. +.+...+.+.... ........ .. ....+..+.+..++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~s~d----g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~ 263 (342)
T d1yfqa_ 188 EESGLKYQIRDVALLPKEQEGYACSSID----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH 263 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETT----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT
T ss_pred eecccccceeeeEeecCCCCEEEeecCC----CeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCc
Confidence 111111111 1 12 2233333332221 2333333322110 00011110 00 01122333333335
Q ss_pred EEEEEEecCCeeEEEEEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEe
Q psy2521 432 KLIVHYIQNVRSVMDLHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFT 483 (783)
Q Consensus 432 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~s 483 (783)
.++++...|| .|++||+.+++.+..+... ...+..+ +++++.+++..+
T Consensus 264 ~~lasg~~Dg--~v~vWD~~~~~~l~~~~~~~~~~~~~~--s~~~~~l~~a~s 312 (342)
T d1yfqa_ 264 KFLYTAGSDG--IISCWNLQTRKKIKNFAKFNEDSVVKI--ACSDNILCLATS 312 (342)
T ss_dssp CCEEEEETTS--CEEEEETTTTEEEEECCCCSSSEEEEE--EECSSEEEEEEE
T ss_pred cEEEEECCCC--EEEEEECCCCcEEEEecCCCCCEEEEE--EeCCCEEEEEEc
Confidence 6667777775 6899999888877766543 3344344 456666665544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.59 E-value=0.99 Score=42.62 Aligned_cols=236 Identities=9% Similarity=0.051 Sum_probs=109.9
Q ss_pred EEEeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCcccccccc-ccccCeeEEeeCCCEEEEEEeecCCCCCCCCccc
Q psy2521 209 TALKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLK-NVKFPSISWTHDHKGFFYNQYCDINGTADGTETT 287 (783)
Q Consensus 209 ~~l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~ 287 (783)
.+-.++++++||+.. .++... ...+..++..+......... .....++++++||+ ||++..
T Consensus 14 ~~P~~vavd~dG~i~--v~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~-i~v~d~------------- 75 (260)
T d1rwia_ 14 LSPSGVAVDSAGNVY--VTSEGM--YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF------------- 75 (260)
T ss_dssp CCEEEEEECTTCCEE--EEECSS--SCEEEEEC----CEEECCCCSCCSCCCEEECTTCC-EEEEET-------------
T ss_pred CCCCEEEEcCCCCEE--EEEcCC--CCEEEEEcCCCceEEEeccCCccCceEEEEcCCCC-EEEeee-------------
Confidence 345678999999843 233211 13455555443322222222 12235788988885 554431
Q ss_pred ccCCceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeee
Q psy2521 288 AHMGQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVI 367 (783)
Q Consensus 288 ~~~~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~ 367 (783)
....+.+..-++ . ..+..... -..-.+++++++|+..+ . .. ....++.++..+. .. .....
T Consensus 76 --~~~~i~~~~~~~---~-~~~~~~~~-~~~p~~iavd~~g~i~v-~-d~--~~~~~~~~~~~~~-~~-------~~~~~ 136 (260)
T d1rwia_ 76 --NNRVVTLAAGSN---N-QTVLPFDG-LNYPEGLAVDTQGAVYV-A-DR--GNNRVVKLAAGSK-TQ-------TVLPF 136 (260)
T ss_dssp --TTEEEEECTTCS---C-CEECCCCS-CCSEEEEEECTTCCEEE-E-EG--GGTEEEEECTTCS-SC-------EECCC
T ss_pred --eeceeeeeeecc---c-eeeeeeee-eeecccccccccceeEe-e-cc--ccccccccccccc-ee-------eeeee
Confidence 122333322221 1 12221111 11235788899998543 2 22 2356777776552 10 11111
Q ss_pred cCccceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEE
Q psy2521 368 PGMDHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMD 446 (783)
Q Consensus 368 ~~~~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~ 446 (783)
.+...... .++++|+ +|+... .+.+|++++.++.. ...+....-....++.+..++.|++....+ .+|+
T Consensus 137 ~~~~~p~~i~~~~~g~-~~v~~~---~~~~i~~~d~~~~~----~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~--~~i~ 206 (260)
T d1rwia_ 137 TGLNDPDGVAVDNSGN-VYVTDT---DNNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHNT--NQVV 206 (260)
T ss_dssp CSCCSCCEEEECTTCC-EEEEEG---GGTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETTT--TEEE
T ss_pred cccCCcceeeecCCCC-Eeeecc---ccccccccccccce----eeeeeccccCCCccceeeeeeeeeeeecCC--CEEE
Confidence 11111112 3667765 665433 34579999987644 233332222223445554446787766544 4688
Q ss_pred EEECCCCceeeeecCC-CeEEEeeeccccccEEEEEEecCCCCceEEEEeC
Q psy2521 447 LHDLNTGKRLHSFPLD-LGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNI 496 (783)
Q Consensus 447 ~~dl~~G~~~~~l~~~-~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~ 496 (783)
+++. ++.....+... .....++..++++ .++++-. . -.+|.+++.
T Consensus 207 ~~~~-~~~~~~~~~~~~~~~P~~i~~d~~g-~l~vad~--~-~~rI~~i~~ 252 (260)
T d1rwia_ 207 KLLA-GSTTSTVLPFTGLNTPLAVAVDSDR-TVYVADR--G-NDRVVKLTS 252 (260)
T ss_dssp EECT-TCSCCEECCCCSCCCEEEEEECTTC-CEEEEEG--G-GTEEEEECC
T ss_pred EEeC-CCCeEEEEccCCCCCeEEEEEeCCC-CEEEEEC--C-CCEEEEEeC
Confidence 8887 45443333222 1223345555554 3554421 1 135666654
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.20 E-value=0.93 Score=43.38 Aligned_cols=189 Identities=13% Similarity=0.060 Sum_probs=102.3
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccCCceEEE
Q psy2521 217 SDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHMGQKIYY 296 (783)
Q Consensus 217 SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~~~~v~~ 296 (783)
.+.++.++.... ...|+++|+..++.+.. ..........+++|++.|+.... ...|++
T Consensus 144 ~~~~~~~~~~~~-----d~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~----------------dg~i~~ 201 (342)
T d2ovrb2 144 QYDGRRVVSGAY-----DFMVKVWDPETETCLHT-LQGHTNRVYSLQFDGIHVVSGSL----------------DTSIRV 201 (342)
T ss_dssp EECSSCEEEEET-----TSCEEEEEGGGTEEEEE-ECCCSSCEEEEEECSSEEEEEET----------------TSCEEE
T ss_pred ccccceeeeecC-----CCeEEEeecccceeeEE-EcCcccccccccCCCCEEEEEeC----------------CCeEEE
Confidence 344455554432 14588999877765432 22222346677889988775552 235777
Q ss_pred EEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc--ccee
Q psy2521 297 HVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM--DHHH 374 (783)
Q Consensus 297 ~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~--~~~~ 374 (783)
+++.+.. .+.......... ..+++++++|+.... ...|+++|+.... ....+.... ....
T Consensus 202 ~d~~~~~----~~~~~~~~~~~v--~~~~~~~~~l~s~s~----d~~i~iwd~~~~~--------~~~~~~~~~~~~~~~ 263 (342)
T d2ovrb2 202 WDVETGN----CIHTLTGHQSLT--SGMELKDNILVSGNA----DSTVKIWDIKTGQ--------CLQTLQGPNKHQSAV 263 (342)
T ss_dssp EETTTCC----EEEEECCCCSCE--EEEEEETTEEEEEET----TSCEEEEETTTCC--------EEEEECSTTSCSSCE
T ss_pred eecccce----eeeEecccccce--eEEecCCCEEEEEcC----CCEEEEEeccccc--------ccccccccceeeece
Confidence 8876542 222222222222 345566777764432 2578999987731 111121111 1122
Q ss_pred EEEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCC---CCceEEEEEEeeCCEEEEEEecCCe--eEEEEEE
Q psy2521 375 EIIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPED---ENRTLDVVAAVANNKLIVHYIQNVR--SVMDLHD 449 (783)
Q Consensus 375 ~~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~---~~~~l~~~~~~~g~~l~~~~~~~g~--~~l~~~d 449 (783)
..++.+++.++..+. .+.|..+|+.+++. .+.+.... ....+..+.+..++.+++....+|. .+|++||
T Consensus 264 ~~~~~~~~~~~s~s~----Dg~i~iwd~~tg~~--i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~D 337 (342)
T d2ovrb2 264 TCLQFNKNFVITSSD----DGTVKLWDLKTGEF--IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337 (342)
T ss_dssp EEEEECSSEEEEEET----TSEEEEEETTTCCE--EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred eecccCCCeeEEEcC----CCEEEEEECCCCCE--EEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEe
Confidence 246667776654433 34688899887651 33333211 1234555555554667777777774 6789999
Q ss_pred CC
Q psy2521 450 LN 451 (783)
Q Consensus 450 l~ 451 (783)
++
T Consensus 338 f~ 339 (342)
T d2ovrb2 338 FD 339 (342)
T ss_dssp CC
T ss_pred CC
Confidence 83
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.12 E-value=1.4 Score=41.51 Aligned_cols=193 Identities=11% Similarity=0.081 Sum_probs=92.8
Q ss_pred EeeEEECCCCcEEEEEEecCCCceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecCCCCCCCCcccccC
Q psy2521 211 LKLYAFSDNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDINGTADGTETTAHM 290 (783)
Q Consensus 211 l~~~~~SPDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~g~~~~~~~ 290 (783)
..++++++||+. |..+..+ ..+++.+..++..+..........++++.++|+ ||+....
T Consensus 59 p~gvav~~~g~i--~v~d~~~---~~i~~~~~~~~~~~~~~~~~~~p~~iavd~~g~-i~v~d~~--------------- 117 (260)
T d1rwia_ 59 PQGLAVDGAGTV--YVTDFNN---RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG--------------- 117 (260)
T ss_dssp CCCEEECTTCCE--EEEETTT---EEEEECTTCSCCEECCCCSCCSEEEEEECTTCC-EEEEEGG---------------
T ss_pred ceEEEEcCCCCE--EEeeeee---ceeeeeeeccceeeeeeeeeeecccccccccce-eEeeccc---------------
Confidence 346789999983 4455433 446555544443322111111225788888886 5544311
Q ss_pred CceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEecCCCCcEEEEEECCCCCCCcccCCCCceeeecCc
Q psy2521 291 GQKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSNNTQGSDLHYFDLHSLPDGKISGKFPLKTVIPGM 370 (783)
Q Consensus 291 ~~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~~~~~~~l~~~dl~~g~~~~l~~~~~~~~l~~~~ 370 (783)
..+++....++... .++.... -..-.++.++++|+. ++... ....|+.++.++. .. ........
T Consensus 118 ~~~~~~~~~~~~~~---~~~~~~~-~~~p~~i~~~~~g~~-~v~~~---~~~~i~~~d~~~~--~~------~~~~~~~~ 181 (260)
T d1rwia_ 118 NNRVVKLAAGSKTQ---TVLPFTG-LNDPDGVAVDNSGNV-YVTDT---DNNRVVKLEAESN--NQ------VVLPFTDI 181 (260)
T ss_dssp GTEEEEECTTCSSC---EECCCCS-CCSCCEEEECTTCCE-EEEEG---GGTEEEEECTTTC--CE------EECCCSSC
T ss_pred ccccccccccccee---eeeeecc-cCCcceeeecCCCCE-eeecc---ccccccccccccc--ee------eeeecccc
Confidence 22455554433211 1111111 011135778899983 33322 2368899987762 00 01011111
Q ss_pred cceeE-EEEeeCCEEEEEECCCCCCceEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecCCeeEEEEEE
Q psy2521 371 DHHHE-IIANNGPELIVKTTKNAPKGKVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQNVRSVMDLHD 449 (783)
Q Consensus 371 ~~~~~-~~s~dg~~l~~~t~~~~~~~~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~g~~~l~~~d 449 (783)
..-.. .++++| .||+.. . .+.+|++++.++.. ..++....-..-.++.+..++.|+++...+ .+|.+++
T Consensus 182 ~~p~gi~~d~~g-~l~vsd-~--~~~~i~~~~~~~~~----~~~~~~~~~~~P~~i~~d~~g~l~vad~~~--~rI~~i~ 251 (260)
T d1rwia_ 182 TAPWGIAVDEAG-TVYVTE-H--NTNQVVKLLAGSTT----STVLPFTGLNTPLAVAVDSDRTVYVADRGN--DRVVKLT 251 (260)
T ss_dssp CSEEEEEECTTC-CEEEEE-T--TTTEEEEECTTCSC----CEECCCCSCCCEEEEEECTTCCEEEEEGGG--TEEEEEC
T ss_pred CCCccceeeeee-eeeeee-c--CCCEEEEEeCCCCe----EEEEccCCCCCeEEEEEeCCCCEEEEECCC--CEEEEEe
Confidence 11122 366665 466543 2 24579999876543 334433322222344544445666654332 4666665
Q ss_pred C
Q psy2521 450 L 450 (783)
Q Consensus 450 l 450 (783)
.
T Consensus 252 ~ 252 (260)
T d1rwia_ 252 S 252 (260)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=93.67 E-value=0.61 Score=47.32 Aligned_cols=103 Identities=13% Similarity=-0.009 Sum_probs=57.0
Q ss_pred EeCCeEEEEEEcCCCCeeEEEEEeCCCCCe-EEEeCCCCcCCCCcEEEeeEEECCCCcEEEEEE--ec------CC----
Q psy2521 165 RQENNYFYFHNKGLQNHSILYVQRNLTGST-EVFLDPNKLSKDGTTALKLYAFSDNGKHFAYCL--SK------SG---- 231 (783)
Q Consensus 165 ~~G~~~yy~~~~~~~~~~~l~~~~~~~g~~-~~llD~n~~~~~g~~~l~~~~~SPDG~~la~~~--~~------~G---- 231 (783)
.||.|+|..- +....+-|.+...-+. +++--||.-. .-+++++++++...... .. .|
T Consensus 97 yDGrylFVND----kan~RVAvIdl~~fkt~kIi~iPn~~~------~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~ 166 (459)
T d1fwxa2 97 YDGRFLFMND----KANTRVARVRCDVMKCDAILEIPNAKG------IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNME 166 (459)
T ss_dssp EEEEEEEEEE----TTTTEEEEEETTTTEEEEEEECSSCCS------EEEEEECCSSBCSEEEEEECSCEESSCSSSSTT
T ss_pred cceeEEEEEc----CCCceEEEEECcceeeeEEEecCCCCC------CceeecccCCCeEEEEccCccccccCCCCcccc
Confidence 4555555543 2235666665433222 3444466432 34566666665432221 10 11
Q ss_pred ---CceEEEEEEECCCCccccccccccccCeeEEeeCCCEEEEEEeecC
Q psy2521 232 ---SDWNTLHIKDVDTGKDYPEVLKNVKFPSISWTHDHKGFFYNQYCDI 277 (783)
Q Consensus 232 ---~d~~~i~v~Dl~tg~~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~ 277 (783)
.....+.++|.++.+......-........++|||+++|+++++..
T Consensus 167 d~~~y~~~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE 215 (459)
T d1fwxa2 167 DVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSE 215 (459)
T ss_dssp CGG-EEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTT
T ss_pred chhhcceEEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEecccc
Confidence 1234577899999876543322223468899999999999986654
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=93.45 E-value=4.5 Score=40.73 Aligned_cols=111 Identities=11% Similarity=0.001 Sum_probs=55.7
Q ss_pred CCCcEEEEEEecCCCceEEEEEEECCCCccccc-ccccc-ccCeeEEeeCCCEEEEEEeecCCC--CCCCCcc-c-ccCC
Q psy2521 218 DNGKHFAYCLSKSGSDWNTLHIKDVDTGKDYPE-VLKNV-KFPSISWTHDHKGFFYNQYCDING--TADGTET-T-AHMG 291 (783)
Q Consensus 218 PDG~~la~~~~~~G~d~~~i~v~Dl~tg~~~~~-~~~~~-~~~~~~WspDg~~l~y~~~~~~~~--~~~g~~~-~-~~~~ 291 (783)
+|||||... +.. + .+|-++|+++-+..+. ++.+. ...++.-++++++.|.....+... ..+|... + ....
T Consensus 97 yDGrylFVN-Dka-n--~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~ 172 (459)
T d1fwxa2 97 YDGRFLFMN-DKA-N--TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 172 (459)
T ss_dssp EEEEEEEEE-ETT-T--TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EE
T ss_pred cceeEEEEE-cCC-C--ceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcc
Confidence 589987654 322 2 4699999998875432 23322 223455666777666554322110 0011100 1 1122
Q ss_pred ceEEEEEcCCCCCCceeEEecCCCCeeEEEEEEecCCcEEEEEEec
Q psy2521 292 QKIYYHVLGTEQDKDIPVVEFPNGRSLGLHSEVTDCGRYLLVSTSN 337 (783)
Q Consensus 292 ~~v~~~~lgt~~~~d~~v~~~~~~~~~~~~~~~SpDGk~l~~~~~~ 337 (783)
..+...+..+......+... .++ ....+|+||||+++++..
T Consensus 173 ~~~t~ID~~tm~V~~QV~V~--g~l---d~~~~s~dGK~af~TsyN 213 (459)
T d1fwxa2 173 NVFTAVDADKWEVAWQVLVS--GNL---DNCDADYEGKWAFSTSYN 213 (459)
T ss_dssp EEEEEEETTTTEEEEEEEES--SCC---CCEEECSSSSEEEEEESC
T ss_pred eEEEEEecCCceEEEEeeeC--CCh---hccccCCCCCEEEEEecc
Confidence 23445555543222112221 111 357899999999988743
|
| >d1ivya_ c.69.1.5 (A:) Human 'protective protein', HPP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Human 'protective protein', HPP species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.91 E-value=0.16 Score=53.14 Aligned_cols=139 Identities=12% Similarity=0.084 Sum_probs=80.1
Q ss_pred EEECCCCcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCc----------------HHHHHHHHcCCEEEEEecC
Q psy2521 530 YFRSKDGTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFS----------------ISRCMFLRHFNGIYAIPNI 593 (783)
Q Consensus 530 ~~~s~dg~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~----------------~~~~~~l~~~G~~v~~~~~ 593 (783)
.+...++..+..+.+..+. + ....|++|++-||||.+...... ..-..|... ..++.+|.
T Consensus 25 yl~~~~~~~lffw~~~s~~-~-~~~~Pl~~wlnGGPG~SS~~g~~~e~GP~~v~~~~~~~~~N~~SW~~~--anllfIDq 100 (452)
T d1ivya_ 25 YLKSSGSKHLHYWFVESQK-D-PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWNLI--ANVLYLES 100 (452)
T ss_dssp EEECSTTEEEEEEEECCSS-C-GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGGGS--SEEEEECC
T ss_pred eeecCCCceEEEEEEEcCC-C-CCCCCEEEEECCCCcHHHHHHHHHccCCcEEcCCCCeeccCCcchhcc--cCEEEEec
Confidence 3455667788877775443 2 24679999999999876422110 001234432 44667786
Q ss_pred CCCCCCChhHHhhccccCCcChHHHHHHHH-HHHHHcCCCCCCcEEEEEeChhHHHHHHHHhc---CCC-ceeEEEEcCC
Q psy2521 594 RGGGELGEDWHNAGRLLKKQNCFDDFQAAA-EYMINKKYTKPKYITIMGGSNGGLLVGACLNQ---RPE-LYGAALILVG 668 (783)
Q Consensus 594 RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~-~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~---~p~-lf~a~i~~~~ 668 (783)
.=|.+|...-. .....+-...-.|+..++ +++....-....++.|.|.||||.-+-.++.. .+. -+++++...|
T Consensus 101 PvGtGfS~~~~-~~~~~~~~~~a~d~~~~l~~f~~~fp~~~~~~~yi~GESYgG~y~P~ia~~i~~~~~i~l~Gi~igng 179 (452)
T d1ivya_ 101 PAGVGFSYSDD-KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNG 179 (452)
T ss_dssp STTSTTCEESS-CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESC
T ss_pred CCCcccccCCC-CCCCCCcHHHHHHHHHHHHHHHHhchhhcCCceEEeeccccchhhHHHHHHHHhcCcccccceEcCCC
Confidence 54444542110 000111112345555554 44444332334589999999999987766542 333 4799999999
Q ss_pred cchhh
Q psy2521 669 ALDML 673 (783)
Q Consensus 669 ~~d~~ 673 (783)
++|..
T Consensus 180 ~~d~~ 184 (452)
T d1ivya_ 180 LSSYE 184 (452)
T ss_dssp CSBHH
T ss_pred ccCch
Confidence 88754
|
| >d1ku0a_ c.69.1.18 (A:) Lipase L1 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Bacterial lipase domain: Lipase L1 species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.91 E-value=0.064 Score=54.69 Aligned_cols=90 Identities=14% Similarity=0.090 Sum_probs=51.6
Q ss_pred CCccEEEEecCCCCCc-----cCCcCcH---HHHHHHHcCCEEEEEecCCCCCCCChhHHhhccccCCcChHHHHHHHHH
Q psy2521 553 RRNPVIIYGYGGYGVS-----VLPTFSI---SRCMFLRHFNGIYAIPNIRGGGELGEDWHNAGRLLKKQNCFDDFQAAAE 624 (783)
Q Consensus 553 ~~~P~ll~~hGg~~~~-----~~~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~g~~~~~~~~~~D~~a~~~ 624 (783)
.++| ||++||-+|.. ....|.. .+...|.+.|+.|+++.+-. ++..|.++.. +.+-++
T Consensus 6 ~~yP-IVLvHGl~Gf~~~~l~~~~YW~G~~~~I~~~L~~~G~~V~~~~V~p---~~S~~~RA~e----------L~~~I~ 71 (388)
T d1ku0a_ 6 NDAP-IVLLHGFTGWGREEMLGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWDRACE----------AYAQLV 71 (388)
T ss_dssp CCCC-EEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEECCCCS---SBCHHHHHHH----------HHHHHH
T ss_pred CCCC-EEEeCCcccCCccccCcccccCCchhhhHHHHHhCCCEEEEeccCC---ccCHHHHHHH----------HHHHHh
Confidence 4577 45579954442 1233432 24566777899999999865 5545544311 111111
Q ss_pred ---------HHHHcC--------------CCCCCcEEEEEeChhHHHHHHHHhcC
Q psy2521 625 ---------YMINKK--------------YTKPKYITIMGGSNGGLLVGACLNQR 656 (783)
Q Consensus 625 ---------~l~~~~--------------~~d~~ri~i~G~S~GG~l~~~~~~~~ 656 (783)
+..+.+ +-..+||-|+||||||+-+=.++...
T Consensus 72 ~~~~d~G~~hs~~~~~~~~~r~y~g~~~~~~~~~kVnLIgHS~GGld~Ryl~~~l 126 (388)
T d1ku0a_ 72 GGTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRVHIIAHSQGGQTARMLVSLL 126 (388)
T ss_dssp CEEEECCHHHHHHHTSCSEEEEECCSCGGGGGTCCEEEEEETTHHHHHHHHHHHH
T ss_pred hhhhhhhHhHHhhhcccccCccCcccccccccCCceeEeecccccHHHHHHHHHh
Confidence 111101 11235899999999999987776543
|
| >d1wpxa1 c.69.1.5 (A:1-421) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.42 E-value=0.78 Score=47.10 Aligned_cols=133 Identities=16% Similarity=0.145 Sum_probs=74.0
Q ss_pred CcEEEEEEEEecCcCCCCCccEEEEecCCCCCccCCcCcH---------------HHHHHHHcCCEEEEEecCCCCCCCC
Q psy2521 536 GTRVPMYIIHRVGALRNRRNPVIIYGYGGYGVSVLPTFSI---------------SRCMFLRHFNGIYAIPNIRGGGELG 600 (783)
Q Consensus 536 g~~v~~~~~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~---------------~~~~~l~~~G~~v~~~~~RG~g~~G 600 (783)
+..+..+++...+ + ..+.|+||++-||||.+...++.. .-..|... ..++.+|..=|.+|.
T Consensus 27 ~~~lfyw~~~s~~-~-~~~~Pl~~WlnGGPG~SS~~g~~~e~GP~~i~~~~~~~~N~~sW~~~--anllfiD~PvGtGfS 102 (421)
T d1wpxa1 27 DKHFFFWTFESRN-D-PAKDPVILWLNGGPGCSSLTGLFFELGPSSIGPDLKPIGNPYSWNSN--ATVIFLDQPVNVGFS 102 (421)
T ss_dssp CCEEEEEEECCSS-C-TTTSCEEEEECCTTTBCTHHHHHHTTSSEEECTTSCEEECTTCGGGS--SEEEEECCSTTSTTC
T ss_pred CceEEEEEEEeCC-C-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEECCCCccccCCcccccc--cCEEEEecCCCCCce
Confidence 4567776654433 2 356799999999998764321110 01123322 346777755444455
Q ss_pred hhHHhhccccCCcChHHHHHHHHHHHHHc-C-CC-CCCcEEEEEeChhHHHHHHHHhc---C---CCceeEEEEcCCcch
Q psy2521 601 EDWHNAGRLLKKQNCFDDFQAAAEYMINK-K-YT-KPKYITIMGGSNGGLLVGACLNQ---R---PELYGAALILVGALD 671 (783)
Q Consensus 601 ~~~~~~g~~~~~~~~~~D~~a~~~~l~~~-~-~~-d~~ri~i~G~S~GG~l~~~~~~~---~---p~lf~a~i~~~~~~d 671 (783)
..-.. ...+....-+|+.++++...+. . +. ....+.|.|.|+||.-+-.++.+ + +--+++++...|++|
T Consensus 103 y~~~~--~~~~~~~~a~d~~~fl~~f~~~fp~~~~k~~~~yi~GESYgG~yvP~la~~i~~~~~~~inlkGi~iGng~~d 180 (421)
T d1wpxa1 103 YSGSS--GVSNTVAAGKDVYNFLELFFDQFPEYVNKGQDFHIAGESYAGHYIPVFASEILSHKDRNFNLTSVLIGNGLTD 180 (421)
T ss_dssp BCSSC--CCCSHHHHHHHHHHHHHHHHHHCTHHHHTCCCEEEEEETTHHHHHHHHHHHHHHCSSCSSCCCEEEEESCCCC
T ss_pred ecCCc--cccchHHHHHHHHHHHHHHHHhChhhhccCCCcEEeeecccccccHHHHHHHHHccCCCcceeeeEecCCccc
Confidence 21111 1111122345665555443333 1 11 12479999999999977666522 1 224789999999888
Q ss_pred hhh
Q psy2521 672 MLR 674 (783)
Q Consensus 672 ~~~ 674 (783)
...
T Consensus 181 p~~ 183 (421)
T d1wpxa1 181 PLT 183 (421)
T ss_dssp HHH
T ss_pred chh
Confidence 653
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=83.96 E-value=20 Score=34.66 Aligned_cols=113 Identities=7% Similarity=-0.029 Sum_probs=61.6
Q ss_pred EeeCCEEEEEECCCCCCc--eEEEEcCCCCCCCCcEEeecCCCCceEEEEEEeeCCEEEEEEecC---------------
Q psy2521 378 ANNGPELIVKTTKNAPKG--KVVTINLNNPCEKNWKTLIPEDENRTLDVVAAVANNKLIVHYIQN--------------- 440 (783)
Q Consensus 378 s~dg~~l~~~t~~~~~~~--~L~~~d~~~~~~~~~~~li~~~~~~~l~~~~~~~g~~l~~~~~~~--------------- 440 (783)
..||...+++.|....+. .++.++.++.. -.|..-+....-.....+...+++.++++....
T Consensus 107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~-l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~ 185 (340)
T d1v04a_ 107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS-LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGL 185 (340)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTE-EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTC
T ss_pred cCCCcEEEEEEeccCCCceeEEEEEeCCCCe-EEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcC
Confidence 346666666666543333 45555543322 223333444334445667777768888874211
Q ss_pred CeeEEEEEECCCCceeeeecCCCeEEEeeeccccccEEEEEEecCCCCceEEEEeCC
Q psy2521 441 VRSVMDLHDLNTGKRLHSFPLDLGQITHISGRRKYNEVFYGFTSFLQPGTIYHCNIP 497 (783)
Q Consensus 441 g~~~l~~~dl~~G~~~~~l~~~~g~v~~~s~~~d~~~l~~~~ss~~~P~~vy~~d~~ 497 (783)
....++.++. ++. +.+........++..++|++.++++.+.- .++++|++.
T Consensus 186 ~~g~v~~~~~--~~~-~~~~~~l~~pNGI~~s~d~~~lyVa~t~~---~~i~~y~~~ 236 (340)
T d1v04a_ 186 AWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLA---HKIHVYEKH 236 (340)
T ss_dssp CCEEEEEECS--SCE-EEEEEEESSEEEEEECTTSSEEEEEEGGG---TEEEEEEEC
T ss_pred CceeEEEEcC--Cce-EEEcCCCCccceeEECCCCCEEEEEeCCC---CeEEEEEeC
Confidence 2245666654 232 22222112234666788999898877553 478888883
|
| >d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: alpha/beta-Hydrolases superfamily: alpha/beta-Hydrolases family: Serine carboxypeptidase-like domain: Serine carboxypeptidase II species: Baker's yeast (Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]
Probab=82.62 E-value=0.99 Score=47.23 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=24.0
Q ss_pred cEEEEecCCCCCCCcHHHHHHHHHHH
Q psy2521 720 ATLVLTGDHDDRVPPLHSYKFIATLQ 745 (783)
Q Consensus 720 ~~Li~~g~~D~~V~~~~~~~~~~~L~ 745 (783)
.|||.+|+.|-.|++...+.+..+|+
T Consensus 374 rVLIy~Gd~D~icn~~Gte~~i~~L~ 399 (483)
T d1ac5a_ 374 EIVLFNGDKDLICNNKGVLDTIDNLK 399 (483)
T ss_dssp EEEEEEETTCSTTCHHHHHHHHHHCE
T ss_pred EEEEEECChhhcCCCHHHHHHHHhCC
Confidence 39999999999999999999999885
|