Psyllid ID: psy2671

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570---
Protein Sequence
MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEcccccccccEEEccccccHHHHHHHHHHHHccccccEEEEEEccEEEEccccccccccccccccEEEEEEccEEEEEEEcccccccccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEcccccEEEEEEEEcccccccccccccccccEEEEEEEccEEEEEEccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEccccccccccEEEEEEccccccccccEEEEEEccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEcccccccccccccEEEEEEcccccEEEEEEccccEEEEccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEccccccccccccccccEEEEEEcccccEEEEEEccccEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEccccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEccccEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccccEEEEEEccccccccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEcccEEEEEEcccccEEEEEccccEEEEEEccccccEEEEEccccccEEEEEEccEccEEEEEEccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEcc
Coil and Loop (DISEMBL)
mevdddkitTKRILTRfksddgevagdlldlplnvntEHLSLIVNSLlqqdegtpylfYVNETEITKTLadvlpldtlnteEVVDIVYQKQAVfqvrpvtrctssmpghaEAVISVkfspngrslasgsgdttvrfwdvttqtplfkcegtpylfyVNETEITKTLadvlpldtlnteEVVDIVYQKQAVfqvrpvtrctssmpghaEAVISVkfspngrslasgsgdttvrfwdvttqtplfkceghkhwvlciawspdskqlvsgckngvihawdsstgkqigqpmrghKQWITAlswepfhlnhqcrrfassgkdgaiRIWDVILSQCVRVLTshtrsvtcirwggsgliysasqDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAtstggfkydpanpeessKHALAKYQaqcpegeklvsgsddftlflwnpekEKKSLARMTGHQQlincvefspdgriiaSASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSdsrllvsgsadsTLKVWNMKTKKieqdlpghgdevyavdwapdgekvasggkdkvLRLWQN
Flexible Loop (DISEMBL)
mevdddkittkriltrfksddgevaGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVIsvkfspngrslasgsgdttvrfWDVTTqtplfkcegtPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVIsvkfspngrslasgsgdttvrFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTShtrsvtcirwggsgliysasqDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKkieqdlpghgDEVYAVDwapdgekvasggkdkvLRLWQN
Low Complexity Region (SEG)
MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Disordered region (IsUnstruct)
************ILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF***********GDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF***********GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF******************************GSDDFTLFLWNP******LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP*******************
Disordered Region (DISOPRED)
********TTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Disordered Region (DISEMBL)
MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Disordered Region (DISPRO)
******KITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEVDDDKITTKRILTRFKSDDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	573	2.2.26 [Sep-21-2011]
Q5RFF8	485	Notchless protein homolog	yes	N/A	0.794	0.938	0.602	1e-167
Q58D20	486	Notchless protein homolog	yes	N/A	0.781	0.921	0.601	1e-167
Q9NVX2	485	Notchless protein homolog	yes	N/A	0.794	0.938	0.6	1e-167
Q8VEJ4	485	Notchless protein homolog	yes	N/A	0.781	0.923	0.599	1e-167
Q9FLX9	473	Notchless protein homolog	yes	N/A	0.738	0.894	0.562	1e-148
P25382	515	Ribosome assembly protein	yes	N/A	0.720	0.801	0.516	1e-125
O74855	502	Ribosome assembly protein	yes	N/A	0.732	0.836	0.475	1e-115
Q8YRI1	1526	Uncharacterized WD repeat	yes	N/A	0.776	0.291	0.313	2e-62
Q00808	1356	Vegetative incompatibilit	no	N/A	0.720	0.304	0.318	4e-59
Q8YTC2	1258	Uncharacterized WD repeat	no	N/A	0.701	0.319	0.323	1e-58

>sp|Q5RFF8|NLE1_PONAB Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3

 Score =  590 bits (1520), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/470 (60%), Positives = 348/470 (74%), Gaps = 15/470 (3%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
           V+F   G  L     D  V   D+T       C          P  F+V++ EI  +L  
Sbjct: 19  VQFQDEGGQLLGSPFDVPV---DITPDRLQLVCNALLAQEDPLPLAFFVHDAEIISSLGK 75

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
            L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76  TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
           TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STGKQ+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTL 195

Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
            GH +WIT LSWEP H N +CR  ASS KDG++RIWD    +C R+LT HT+SVTC+RWG
Sbjct: 196 AGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG 255

Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
           G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        +P
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNP 315

Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                + +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK L RMTGHQ LI
Sbjct: 316 QDLQGSLQELKERALSRYNLMRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALI 375

Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
           N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435

Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+ 
Sbjct: 436 STLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485

Pongo abelii (taxid: 9601)

>sp|Q58D20|NLE1_BOVIN Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=3

 Score =  589 bits (1519), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/477 (60%), Positives = 350/477 (73%), Gaps = 29/477 (6%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
           V+F   G  L     D  V   D+T       C          P  FYV++ EI  +L  
Sbjct: 20  VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEDPLPLAFYVHDAEIVSSLGR 76

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
            L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 77  TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 136

Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
           TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STGKQ+G+ +
Sbjct: 137 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRAL 196

Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
            GH +WITALSWEP H N +CR  ASS KDG++R+WD    +C R LT H +SVTC+RWG
Sbjct: 197 TGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG 256

Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
           G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R     TG F  +P
Sbjct: 257 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR-----TGAF--EP 309

Query: 409 ANP-----------EESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARM 456
           A             +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK LARM
Sbjct: 310 AEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARM 369

Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
           TGHQ LIN V FSPD R+IASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRL
Sbjct: 370 TGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 429

Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           LVSGS+DSTLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+ 
Sbjct: 430 LVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 486

Bos taurus (taxid: 9913)

>sp|Q9NVX2|NLE1_HUMAN Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=4

 Score =  589 bits (1518), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 282/470 (60%), Positives = 348/470 (74%), Gaps = 15/470 (3%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
           V+F   G  L     D  V   D+T       C          P  F+V++ EI  +L  
Sbjct: 19  VQFQDEGGQLLGSPFDVPV---DITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGK 75

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
            L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76  TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
           TTVRFWD++T+TP F C+GH+HWVL I+WSPD ++L SGCKNG I  WD STGKQ+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTL 195

Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
            GH +WIT LSWEP H N +CR  ASS KDG++RIWD    +C R+LT HT+SVTC+RWG
Sbjct: 196 AGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG 255

Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
           G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        +P
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNP 315

Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                + +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK L RMTGHQ LI
Sbjct: 316 QDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALI 375

Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
           N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435

Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+ 
Sbjct: 436 STLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485

Homo sapiens (taxid: 9606)

>sp|Q8VEJ4|NLE1_MOUSE Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=4

 Score =  587 bits (1513), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/477 (59%), Positives = 352/477 (73%), Gaps = 29/477 (6%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVNETEITKTLAD 168
           V+F   G  L     D  V   D+T       C       E  P  FYV++ EI  +L  
Sbjct: 19  VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEEPLPLAFYVHDAEIVSSLGK 75

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
            L   ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 76  TLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
           TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG +  WD STG Q+G+ +
Sbjct: 136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTL 195

Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
            GH +WIT LSWEP H+N +CR  ASS KDG++R+WD    +C R+LT HT+SVTC+RWG
Sbjct: 196 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 255

Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
           G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R     TG F  +P
Sbjct: 256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR-----TGAF--EP 308

Query: 409 ANP-----------EESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARM 456
           A             +E  + A ++Y     +G E+LVSGSDDFTLFLW+P ++KK LARM
Sbjct: 309 AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARM 368

Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
           TGHQ LIN V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRL
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRL 428

Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           LVSGS+DSTLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+ 
Sbjct: 429 LVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485

Mus musculus (taxid: 10090)

>sp|Q9FLX9|NLE1_ARATH Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1

 Score =  525 bits (1352), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 239/425 (56%), Positives = 317/425 (74%), Gaps = 2/425 (0%)

Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
           E  PY FYV++ E+   +   L  + ++ E+V+ IVYQ+QAVF++RPV RC+ ++ GHAE
Sbjct: 51  EMLPYSFYVSDEELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAE 110

Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
           AV+ V FSP+G+ LASGSGDTTVR WD+ T+TPLF C+GHK+WVL +AWSPD K LVSG 
Sbjct: 111 AVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGS 170

Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
           K+G I  W+   G+  G P+ GHK+WIT +SWEP HL+  CRRF +S KDG  RIWD+ L
Sbjct: 171 KSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITL 230

Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
            + +  L+ HT +VTC++WGG G+IY+ SQD TIK+W  + G + R L+GH HW+N+LAL
Sbjct: 231 KKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLAL 290

Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
           ST+Y++R  A    G +Y P   ++ +     K +   P  E+LVSGSDDFT+FLW P  
Sbjct: 291 STEYVLRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSP--ERLVSGSDDFTMFLWEPSV 348

Query: 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
            K+   R+TGHQQL+N V FSPDG+ IASASFDKS++LW+G  G+F+T  RGHV  VY V
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQV 408

Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
           +WS+DSRLL+SGS DSTLK+W ++TKK++QDLPGH DEV+AVDW+PDGEKV SGGKD+VL
Sbjct: 409 SWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468

Query: 569 RLWQN 573
           +LW+ 
Sbjct: 469 KLWKG 473

Arabidopsis thaliana (taxid: 3702)

>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3

 Score =  450 bits (1158), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/424 (51%), Positives = 290/424 (68%), Gaps = 11/424 (2%)

Query: 157 VNETEITKTLADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKF 215
           V   +IT  L   L     N TE+ + ++Y  +AVF+V+PVTR +S++ GH   ++   F
Sbjct: 92  VKTIDITDNLYSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAF 151

Query: 216 SPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
           +P+  S + +G+GD T R WD  TQTP+   +GH +WVLC++WSPD + + +G  +  I 
Sbjct: 152 APHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIR 211

Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR--RFASSGKDGAIRIWDVILSQCV 332
            WD  +G+ +G  +RGH +WIT+LSWEP HL       R ASS KDG I+IWD +   C 
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQ 271

Query: 333 RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA-SDGVMCRTLEGHAHWVNTLALSTD 391
             ++ HT SV+C++WGG GL+YS S DRT++VW   S G     L+ HAHWVN L+LSTD
Sbjct: 272 YTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTD 331

Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG----EKLVSGSDDFTLFLWNPE 447
           Y +R+ A    G K  P+ PEE+ K AL  Y+  C +     E +V+ SDD+T+FLWNP 
Sbjct: 332 YALRIGAFDHTGKK--PSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPL 389

Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
           K  K +ARMTGHQ+L+N V FSPDGR I SASFD SIKLWDGR GKFI+T RGHV +VY 
Sbjct: 390 KSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQ 449

Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
           VAWSSD RLLVS S D+TLKVW+++T+K+  DLPGH DEVY VDW+ DG++V SGGKDK+
Sbjct: 450 VAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKM 509

Query: 568 LRLW 571
           +RLW
Sbjct: 510 VRLW 513

Involved in processing and efficient intra-nuclear transport or pre-60S ribosomal subunits. Forms a complex with REA1 which is essential for ATP-dependent dissociation of a group of nonribosomal factors from the pre-60S particle.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1

 Score =  416 bits (1069), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/431 (47%), Positives = 284/431 (65%), Gaps = 11/431 (2%)

Query: 152 PYLFYVNETEITKTLAD-----VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGH 206
           PY F ++  + T  + D     V     + TE+ + ++Y  QAVF+VR VTRCT+SM GH
Sbjct: 74  PYNFALHHEDETIEIQDNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGH 133

Query: 207 AEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
              +IS +FSP+  S L +GSGD T R WD  TQTP+   +GH +WV C+AW+PD+  + 
Sbjct: 134 DGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIA 193

Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF--ASSGKDGAIRI 323
           +G  +  I  WD   G  IG  +R H + I AL W+P HL      +  AS  KD  +RI
Sbjct: 194 TGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRI 253

Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
           W+V L   +  L+ HT  +TC+RWGG   IYS+S D+TI++W A DG     L+GHA  V
Sbjct: 254 WNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARV 313

Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLF 442
           N L+LST++++R  A     FK  P +  +  + A  +Y+A   + GE+LVS SDD  L 
Sbjct: 314 NHLSLSTEHVLRSGAYDHTDFK--PKSFSDERRKAKERYEACLKQSGERLVSASDDLQLI 371

Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
           LW+P+K  K + +M GHQ+++N   FSPDGR IA+ASFD S++LWDG+ GKF+ TLRGHV
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHV 431

Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG 562
            AVY  AWS+DSRLLVS S D+TLKVW++++KK++ DLPGH D+V+AVDW+PDG++VASG
Sbjct: 432 AAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASG 491

Query: 563 GKDKVLRLWQN 573
           G DK +R+W +
Sbjct: 492 GADKAVRIWSH 502

Involved in processing and efficient intra-nuclear transport or pre-60S ribosomal subunits.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score =  241 bits (614), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 152/485 (31%), Positives = 243/485 (50%), Gaps = 40/485 (8%)

Query: 100  TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
            ++C     GH   V SV FS +G  LASGS D TVR WD+++   L+  +G         
Sbjct: 1022 SQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQG--------H 1073

Query: 160  TEITKTLA---DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
            T   +++    D   L +   +++V +               C  ++ G+   V  + FS
Sbjct: 1074 TSCVRSVVFSPDGAMLASGGDDQIVRLWDISSG--------NCLYTLQGYTSWVRFLVFS 1125

Query: 217  PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
            PNG +LA+GS D  VR WD++++  L+  +GH +WV  +A+SPD   L SG  +  +  W
Sbjct: 1126 PNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185

Query: 277  DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
            D S+ K +   ++GH  W+ ++ + P          AS   D  +R+W++  S+C+    
Sbjct: 1186 DISSSKCL-YILQGHTSWVNSVVFNP-----DGSTLASGSSDQTVRLWEINSSKCLCTFQ 1239

Query: 337  SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR 395
             HT  V  + +   G ++ S S D+T+++W  S      T +GH +WVN++A + D  M 
Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSML 1299

Query: 396  VEATSTGGFKYDPANPEESSKHALAKYQAQ---------CPEGEKLVSGSDDFTLFLWNP 446
               +     +      E SS   L  +Q            P+G  L SGSDD T+ LW+ 
Sbjct: 1300 ASGSGDQTVRL----WEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSI 1355

Query: 447  EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
                + L    GH   +  V FSPDG I+AS S D++++LW    GK + TL+GH   V 
Sbjct: 1356 SS-GECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVG 1414

Query: 507  MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
             + +S D  LL SGS D T+++WN+ + +    L GH + V +V ++ DG  +ASG  D+
Sbjct: 1415 SIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDE 1474

Query: 567  VLRLW 571
             ++LW
Sbjct: 1475 TIKLW 1479

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score =  229 bits (584), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 150/471 (31%), Positives = 226/471 (47%), Gaps = 58/471 (12%)

Query: 102  CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
            CT ++ GH  +V+SV FS +G+ +ASGS D T++ WD  + T     EG     +     
Sbjct: 833  CTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAF- 891

Query: 162  ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
                        + + E V      K           CT ++ GH   V SV FSP+G+ 
Sbjct: 892  ------------SPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR 939

Query: 222  LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG 281
            +ASGS D T++ WD  + T     EGH   VL +A+SPD +++ SG  +  I  WD+++G
Sbjct: 940  VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASG 999

Query: 282  KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
                Q + GH   + ++++ P       +R AS   D  I+IWD     C + L  H   
Sbjct: 1000 T-CTQTLEGHGGSVWSVAFSP-----DGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGW 1053

Query: 342  VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
            V  + +   G  + S S D TIK+W A  G   +TLEGH   V ++A S           
Sbjct: 1054 VQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFS----------- 1102

Query: 401  TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
                                      P+G+++ SGS D T+ +W+          + GH 
Sbjct: 1103 --------------------------PDGQRVASGSIDGTIKIWDA-ASGTCTQTLEGHG 1135

Query: 461  QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG 520
              ++ V FSPDG+ +AS S D +IK+WD   G    TL GH   V  VA+S D + + SG
Sbjct: 1136 GWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASG 1195

Query: 521  SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            S+D T+K+W+  +    Q L GHG  V +V ++PDG++VASG  D  +++W
Sbjct: 1196 SSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1

 Score =  228 bits (581), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 224/460 (48%), Gaps = 58/460 (12%)

Query: 113  VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPL 172
            ++S  FSP G+ LA+   D  VR W+V +   L  C G     + N         D   L
Sbjct: 645  ILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRG-----HSNWVRFVVFSPDGEIL 699

Query: 173  DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR 232
             +   +E V +   +  V        C  ++ GH   V SV F P+G +LAS SGD T++
Sbjct: 700  ASCGADENVKLWSVRDGV--------CIKTLTGHEHEVFSVAFHPDGETLASASGDKTIK 751

Query: 233  FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK 292
             WD+   T L    GH  WV C+A+SPD   L S   +  I  WD S GK + + ++ H 
Sbjct: 752  LWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCL-RTLKSHT 810

Query: 293  QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSG 351
             W+ +++   F  + Q    AS   D  I+IW+    +C++    HT SV  I +   S 
Sbjct: 811  GWVRSVA---FSADGQ--TLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSK 865

Query: 352  LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
            ++ S S DRTIK+W     +  +TL GH + V ++A S                      
Sbjct: 866  ILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFS---------------------- 903

Query: 412  EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD 471
                           P+G+ L   S D ++ LWN  +  + L    G+      V FSPD
Sbjct: 904  ---------------PDGQTLACVSLDQSVRLWNC-RTGQCLKAWYGNTDWALPVAFSPD 947

Query: 472  GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
             +I+AS S DK++KLWD + GK+I++L GH   +Y +A+S DS+ L S S DS++++WN+
Sbjct: 948  RQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNI 1007

Query: 532  KTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
             T +  Q L  H D VYAV + P G+ +A+G  D  ++LW
Sbjct: 1008 STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLW 1047

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	573
328710969	472	PREDICTED: notchless protein homolog 1-l	0.762	0.925	0.667	1e-177
321458341	487	hypothetical protein DAPPUDRAFT_300951 [	0.739	0.870	0.667	1e-174
357616007	475	notchless [Danaus plexippus]	0.739	0.892	0.676	1e-173
322796007	482	hypothetical protein SINV_09056 [Solenop	0.813	0.966	0.628	1e-170
156552151	475	PREDICTED: notchless protein homolog 1 [	0.724	0.873	0.686	1e-170
383854187	484	PREDICTED: notchless protein homolog 1-l	0.813	0.962	0.625	1e-169
332019821	481	Notchless protein-like protein 1 [Acromy	0.764	0.910	0.654	1e-169
242010592	471	conserved hypothetical protein [Pediculu	0.794	0.966	0.613	1e-168
281427382	470	notchless [Tribolium castaneum] gi|27000	0.722	0.880	0.658	1e-167
417411092	484	Putative notchless-like wd40 repeat-cont	0.794	0.940	0.604	1e-167

>gi|328710969|ref|XP_001945555.2| PREDICTED: notchless protein homolog 1-like [Acyrthosiphon pisum]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 297/445 (66%), Positives = 357/445 (80%), Gaps = 8/445 (1%)

Query: 131 DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT-LNTEEVVDIVYQKQA 189
           + TV    +   + L + E  PY F+V++ EIT  L + L      +TE VVDI+YQ+QA
Sbjct: 30  NVTVNHLQLICNSLLKQDETVPYAFFVDDKEITNNLDECLDAKKKFSTELVVDIIYQEQA 89

Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK 249
           VF+VRP+TRCTSS+PGHAEAVISV+FSP+ R LASGSGDTTVRFWD+  QTPL  CEGHK
Sbjct: 90  VFKVRPITRCTSSLPGHAEAVISVQFSPDSRKLASGSGDTTVRFWDLDMQTPLHTCEGHK 149

Query: 250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQC 309
           +WVLCIAWSP+SK LVSGCKNG+I +W+  TGK++G PM GHKQWITAL W P+HL+ +C
Sbjct: 150 NWVLCIAWSPNSKYLVSGCKNGMIMSWNVETGKRVGPPMTGHKQWITALCWAPYHLSPEC 209

Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD 369
           R FASS KDG IRIWD+IL QC R LTSHTRS+TC++WGG+GL+YS+SQDRTIKVWRA D
Sbjct: 210 RIFASSSKDGDIRIWDIILGQCQRSLTSHTRSITCLKWGGTGLLYSSSQDRTIKVWRADD 269

Query: 370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF---KYDPANPEESSKHALAKYQAQC 426
           G++CRTLEGHAHWVNTLALSTDY+++       G    K D    E   ++ +A      
Sbjct: 270 GILCRTLEGHAHWVNTLALSTDYVIKTAMVPQPGSNSDKNDNVLAEAKKRYDVAVANG-- 327

Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
             GE+L+SGSDDFTLFLW PE  K S+ARMTGHQQLINCV+FSPD R++ASASFDKSIKL
Sbjct: 328 --GERLISGSDDFTLFLWAPESSKNSVARMTGHQQLINCVQFSPDTRLVASASFDKSIKL 385

Query: 487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
           WDG+ G+F+ T+RGHVQAVYM+ WS+DSRLLVSGSADSTLKVW++K KK++ DLPGH DE
Sbjct: 386 WDGKTGQFLGTMRGHVQAVYMIRWSADSRLLVSGSADSTLKVWDVKAKKLQGDLPGHADE 445

Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
           V+AVDW+PDG KVASGGKDKVLRLW
Sbjct: 446 VFAVDWSPDGHKVASGGKDKVLRLW 470

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321458341|gb|EFX69411.1| hypothetical protein DAPPUDRAFT_300951 [Daphnia pulex]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 285/427 (66%), Positives = 347/427 (81%), Gaps = 3/427 (0%)

Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
           E TPY F+V + E+T  LA  L    L++E+V++I+YQ QAVFQVR VTRCTSS+PGH+E
Sbjct: 60  EATPYTFFVQDVEVTSNLAAALKNAVLDSEKVLEIIYQPQAVFQVRAVTRCTSSLPGHSE 119

Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
           AVISV FSP+G+ LASGSGDTTVRFWD+ T++PLF C+GH+HWVLC AW+P+ + L S C
Sbjct: 120 AVISVSFSPDGKQLASGSGDTTVRFWDLNTESPLFTCKGHRHWVLCTAWAPNGQTLASAC 179

Query: 269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
           K+G I  WD++TG Q G+P+ GHKQW+T L WEPFHLN QCR+ ASS KDG +RIWDV+L
Sbjct: 180 KSGEIWLWDAATGTQKGKPLVGHKQWVTWLVWEPFHLNPQCRKLASSSKDGDVRIWDVVL 239

Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
             C+  L  H + V+CIRWGG+GLIYSASQDRT+KVWR+ DG++CRTL+GHAHWVNTLAL
Sbjct: 240 GTCLINLAGHQQGVSCIRWGGTGLIYSASQDRTVKVWRSEDGILCRTLQGHAHWVNTLAL 299

Query: 389 STDYLMRVEATSTGGF--KYDPANPEESSKHALAKYQ-AQCPEGEKLVSGSDDFTLFLWN 445
           STDY++R  A     F        PEE+ K AL +Y   Q    E+LVSGSDDFTLFLWN
Sbjct: 300 STDYVLRTGAFEPAEFGRTQKTLTPEEAQKKALDRYNLVQQVGPERLVSGSDDFTLFLWN 359

Query: 446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV 505
           PE +KK LARMTGHQQL+N V+FSPD R+IASASFDKSIK+WDGR G FITTLRGHVQAV
Sbjct: 360 PETDKKHLARMTGHQQLVNDVKFSPDSRLIASASFDKSIKIWDGRTGNFITTLRGHVQAV 419

Query: 506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD 565
           Y ++WS+DSRLLVSGSADSTLKVWN+KTKK+  DLPGHGDEV+AVDW+PD ++V SGG+D
Sbjct: 420 YQISWSADSRLLVSGSADSTLKVWNLKTKKLHLDLPGHGDEVFAVDWSPDSQRVVSGGRD 479

Query: 566 KVLRLWQ 572
           KVL++W+
Sbjct: 480 KVLKIWR 486

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357616007|gb|EHJ69951.1| notchless [Danaus plexippus]

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/436 (67%), Positives = 350/436 (80%), Gaps = 12/436 (2%)

Query: 145 LFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP 204
           L K E  P+LF+V + EIT TL D L +  LNTEEVV+I+YQ+QAVF+VRPVTRCTSS+P
Sbjct: 45  LLKEEDKPFLFFVKDVEITSTLQDALDVSKLNTEEVVEIIYQQQAVFKVRPVTRCTSSIP 104

Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
           GHAEAVIS  FSP+G+ LASGSGDTTVRFWD+ TQTP   C+GH +WVLCI+WSPD  +L
Sbjct: 105 GHAEAVISTSFSPSGKHLASGSGDTTVRFWDLNTQTPHHVCKGHSNWVLCISWSPDGTKL 164

Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
            S CK G I  WD  TG+QIG+ + GHKQW+TAL+WEP+  N +CR+ ASS KD  +RIW
Sbjct: 165 ASACKQGRIMIWDPLTGQQIGKTLLGHKQWVTALAWEPYIRNTECRKLASSSKDTDVRIW 224

Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
           D +   CV  LT HT++VTC++WGG+GLIY++SQDRTIKVWR+ DG++CRTLEGHAHWVN
Sbjct: 225 DTVTGNCVLNLTGHTKAVTCVKWGGTGLIYTSSQDRTIKVWRSEDGILCRTLEGHAHWVN 284

Query: 385 TLALSTDYLMRVEATSTGGF-----KYDPANPEES-SKHALAKYQAQCPEG-EKLVSGSD 437
           TLALSTDY++R     TG F     K+D  + +    K A  +Y   C +  E+LVSGSD
Sbjct: 285 TLALSTDYVLR-----TGPFHPILDKFDHTDDKIILQKRAKERYDLTCSKDEERLVSGSD 339

Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
           DFTLFLW P+KEK+ LARMTGHQQLIN V+FSPD RIIASASFDKS+KLW+   GKFITT
Sbjct: 340 DFTLFLWMPQKEKRPLARMTGHQQLINDVKFSPDARIIASASFDKSVKLWESTTGKFITT 399

Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE 557
           LRGHVQAVYMVAWS+DSRLL+S SADSTLKVWNMKTKK+E DLPGH DEVYAVDW+PDG 
Sbjct: 400 LRGHVQAVYMVAWSADSRLLLSSSADSTLKVWNMKTKKLELDLPGHADEVYAVDWSPDGS 459

Query: 558 KVASGGKDKVLRLWQN 573
            VASGGKDKVL+LWQ+
Sbjct: 460 YVASGGKDKVLKLWQH 475

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322796007|gb|EFZ18631.1| hypothetical protein SINV_09056 [Solenopsis invicta]

 Score =  604 bits (1558), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 300/477 (62%), Positives = 352/477 (73%), Gaps = 11/477 (2%)

Query: 103 TSSMPGHAEA--VISVKFSPNGRSLASG----SGDTTVRFWDVTTQTPLFKCEGTPYLFY 156
           T + P +AE   V+S   S  G  L  G      D TV          L + E  P  FY
Sbjct: 11  TDAAPANAEVKRVLSRFKSDTGEVLPGGLLDLPVDVTVDKLQAICNALLQQEEPLPLAFY 70

Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
           VN  E+T  L   +  D   +E+VV+IVYQ QAVF+VR VTRCT S+ GH EAVISV FS
Sbjct: 71  VNNVEVTDVLEKYINKDFSISEDVVEIVYQPQAVFKVRAVTRCTGSLEGHKEAVISVAFS 130

Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW 276
           P+G+ LASGSGDTTVR WD+ TQTP + CEGH+HWVLCI+WSP   +L S CKNG+I+ W
Sbjct: 131 PDGKHLASGSGDTTVRLWDIYTQTPHYTCEGHRHWVLCISWSPCGTKLASACKNGLIYLW 190

Query: 277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT 336
           +  TG+QIG+ M GH+ W+T+L WEP+H N +C   AS+ KD  IRIWD   +Q  RVL+
Sbjct: 191 NPDTGRQIGKAMTGHRMWVTSLCWEPYHKNPECLHLASASKDCDIRIWDTKRAQTCRVLS 250

Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
            HTRSVTCI+WGGSGLIYSASQDRTIKVWRA DGV+CRTLEGHAHWVNTLAL+ DY +R 
Sbjct: 251 GHTRSVTCIKWGGSGLIYSASQDRTIKVWRAEDGVLCRTLEGHAHWVNTLALNVDYALR- 309

Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
               TG F+      +  S    A+ Q +    E+LVSGSDDFTLFLW PEK+KK +ARM
Sbjct: 310 ----TGPFQLGSTENKTDSPLEYARKQYESVGEERLVSGSDDFTLFLWKPEKQKKPIARM 365

Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
           TGHQQLIN V+FSPDGR+IASASFDKSIKLWD  IG +IT+LRGHVQAVY +AWS+DSRL
Sbjct: 366 TGHQQLINDVKFSPDGRVIASASFDKSIKLWDSNIGTYITSLRGHVQAVYSIAWSADSRL 425

Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           LVSGSADSTLKVW+MKTKK+ QDLPGH DEVYAVDW+PDG +V SGGKDKVLRLWQN
Sbjct: 426 LVSGSADSTLKVWSMKTKKLSQDLPGHADEVYAVDWSPDGLRVVSGGKDKVLRLWQN 482

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156552151|ref|XP_001605717.1| PREDICTED: notchless protein homolog 1 [Nasonia vitripennis]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 291/424 (68%), Positives = 339/424 (79%), Gaps = 9/424 (2%)

Query: 152 PYLFYVNETEITKTLADVLPLDTLNT-EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
           P  F++N+ +IT++L +   +   NT E+VV+IVYQ QA+FQVR VTRCT ++ GH EAV
Sbjct: 59  PLAFFINDVQITESLEE--NIKEFNTSEDVVEIVYQPQAIFQVRAVTRCTGTLEGHKEAV 116

Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN 270
           +SV FSPNG++LASGSGDTTVR WDV TQTP F C GHKHWVLC+AWSP   ++ S CKN
Sbjct: 117 VSVAFSPNGQTLASGSGDTTVRLWDVYTQTPTFTCTGHKHWVLCLAWSPCGTKVASACKN 176

Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ 330
           G I  WD  TGKQ+G+ M GHK W+T+LSWEP+H N +CRR  S+ KD  +RIWD  L Q
Sbjct: 177 GRIILWDPETGKQLGKDMVGHKMWVTSLSWEPYHQNPECRRLISASKDSDLRIWDTKLGQ 236

Query: 331 CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390
            + VL  HT+SVTC++WGG GLIYSASQDRTIKVWRA DGV+CRTLEGH HWVNTLAL+ 
Sbjct: 237 TLLVLAGHTKSVTCVKWGGRGLIYSASQDRTIKVWRAEDGVLCRTLEGHGHWVNTLALNV 296

Query: 391 DYLMRVEATSTGGFKYDP-ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE 449
           DY++RV     G F   P  N EE +  A A  + +    EKLVSGSDDFTLFLW PEKE
Sbjct: 297 DYVLRV-----GPFCIVPDKNKEEITPQAYALKEYENVGEEKLVSGSDDFTLFLWKPEKE 351

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
           KK LARMTGHQQLIN V+FSPDGR+IASASFDKS+KLWD   GK+IT+LRGHVQAVY VA
Sbjct: 352 KKPLARMTGHQQLINDVKFSPDGRLIASASFDKSVKLWDSNTGKYITSLRGHVQAVYSVA 411

Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
           WS+DSRLLVSGSADSTLKVW+MKTK++ QDLPGHGDEVYAVDWAPDG +VASGGKDKVLR
Sbjct: 412 WSADSRLLVSGSADSTLKVWSMKTKQLSQDLPGHGDEVYAVDWAPDGIRVASGGKDKVLR 471

Query: 570 LWQN 573
           LWQN
Sbjct: 472 LWQN 475

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854187|ref|XP_003702603.1| PREDICTED: notchless protein homolog 1-like [Megachile rotundata]

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 297/475 (62%), Positives = 353/475 (74%), Gaps = 9/475 (1%)

Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGD----TTVRFWDVTTQTPLFKCEGTPYLFYVN 158
           TS+ P   + V++   S  G  L+ G  D     TV          L   E  P+ FY+N
Sbjct: 15  TSTEPTENKRVLARFKSDQGEVLSGGLLDLPTNITVDKLQAICNALLQHEEPIPFTFYIN 74

Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
           + EI  +L + +  +   +E+VV+I+YQ QA+F+VR VTRC+ S+ GH EAVISV FSP+
Sbjct: 75  DIEIVDSLENNINENFSISEDVVEIIYQPQAIFKVRAVTRCSGSLEGHKEAVISVAFSPD 134

Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
           G  LASGSGDTTVRFWD+ TQTP + CEGHKHWVLCI+WSP   +L S CKNG I  WD 
Sbjct: 135 GTGLASGSGDTTVRFWDIYTQTPYYTCEGHKHWVLCISWSPCGTKLASACKNGTILLWDP 194

Query: 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH 338
            TGKQIG+ M GHK W+T+LSWEPFH N +C+   S+ KDG +RIWD I +Q VR L+ H
Sbjct: 195 KTGKQIGKAMLGHKMWVTSLSWEPFHRNPKCQYLVSASKDGDLRIWDTIRAQTVRSLSGH 254

Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
           T+SVTC++WGG+GLIYSASQDRTIK+WRA DG++CRTL+GHAHWVNTLAL+ DY++R   
Sbjct: 255 TKSVTCVKWGGNGLIYSASQDRTIKIWRAEDGILCRTLQGHAHWVNTLALNVDYVLR--- 311

Query: 399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
             TG F    +  +       AK Q Q    E LVSGSDDFTLFLW PEKEKK +ARMTG
Sbjct: 312 --TGPFHLGKSQDQNEDVIEYAKKQYQSIGEEILVSGSDDFTLFLWKPEKEKKPIARMTG 369

Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
           HQQLIN V+FSP+GRIIASASFDKSIKLW+   GK+IT+LRGHVQAVY VAWS+DSRLLV
Sbjct: 370 HQQLINDVKFSPNGRIIASASFDKSIKLWEANTGKYITSLRGHVQAVYSVAWSADSRLLV 429

Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           SGSADSTLKVW MKTKK+ QDLPGH DEVYAVDW+PDG  VASGGKDKVLRLWQN
Sbjct: 430 SGSADSTLKVWCMKTKKLCQDLPGHADEVYAVDWSPDGLCVASGGKDKVLRLWQN 484

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332019821|gb|EGI60282.1| Notchless protein-like protein 1 [Acromyrmex echinatior]

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/443 (65%), Positives = 340/443 (76%), Gaps = 5/443 (1%)

Query: 131 DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAV 190
           D TV          L + E  P  FYVN  E+T  L   +  D   +E+VV+I+YQ QAV
Sbjct: 44  DITVDKLQAICNALLQQEEPLPLAFYVNNVEVTDVLEKYVGKDFSISEDVVEIIYQPQAV 103

Query: 191 FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH 250
           F+VR VTRCT S+ GH EAVISV FSP+G+ LASGSGDTTVR WD+ TQTP + CEGH+H
Sbjct: 104 FKVRAVTRCTGSLEGHKEAVISVAFSPDGKHLASGSGDTTVRLWDIYTQTPHYTCEGHRH 163

Query: 251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR 310
           WVLCIAWS    +L S CKNG+I+ WD +TGKQIG+PM GH+ W+T+L WEP+H N +C 
Sbjct: 164 WVLCIAWSSCGTKLASACKNGLIYLWDPNTGKQIGKPMTGHRMWVTSLCWEPYHKNPECM 223

Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG 370
             ASS KD  +RIWD   +Q  RVL+ HT+SVTC++WGGSGLIYSASQDRTIKVWRA DG
Sbjct: 224 YLASSSKDCDVRIWDTKRAQTCRVLSGHTKSVTCVKWGGSGLIYSASQDRTIKVWRAEDG 283

Query: 371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE 430
           V+CRTLEGHAHWVNTLAL+ DY++R     TG F+      +  S    AK Q +    E
Sbjct: 284 VLCRTLEGHAHWVNTLALNVDYVLR-----TGPFQLGLTANKTDSPLEYAKKQYETVGEE 338

Query: 431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR 490
           KLVSGSDDFTLFLW PEKEKK +ARMTGHQQLIN V+FSPDGR+IASASFDKSIKLW+  
Sbjct: 339 KLVSGSDDFTLFLWKPEKEKKPIARMTGHQQLINDVKFSPDGRLIASASFDKSIKLWESN 398

Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV 550
            G +I +LRGHVQAVY +AWS+DSRLLVSGSADSTLKVW++KTKK+ QDLPGH DEVYAV
Sbjct: 399 TGTYIASLRGHVQAVYSIAWSADSRLLVSGSADSTLKVWSIKTKKLSQDLPGHADEVYAV 458

Query: 551 DWAPDGEKVASGGKDKVLRLWQN 573
           DW+PDG +VASGGKDKVLRLWQN
Sbjct: 459 DWSPDGLRVASGGKDKVLRLWQN 481

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010592|ref|XP_002426049.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510059|gb|EEB13311.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  599 bits (1544), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 295/481 (61%), Positives = 357/481 (74%), Gaps = 26/481 (5%)

Query: 106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVN 158
           M  + E  I  +F      +  G  D  V   +VT Q     C       E T YLF+VN
Sbjct: 1   MDENNEKRILTRFKSESGDVIEGLLDLPV---NVTVQNLQRMCNALLKEDENTSYLFFVN 57

Query: 159 ETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN 218
           + EIT TL   +  D  N+E V++I+YQ+QAVF+V+PV+RCTSS+PGHAE+VISV F PN
Sbjct: 58  DQEITDTLEKAIKKDVDNSENVIEIIYQQQAVFKVKPVSRCTSSLPGHAESVISVSFGPN 117

Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS 278
            R+LASGSGDTTVR WD+ TQTP +   GHK+WVLC++W+ D K+L SG KNG+I  WD 
Sbjct: 118 SRNLASGSGDTTVRLWDLNTQTPHYTLTGHKNWVLCLSWTSDGKKLASGDKNGIILIWDP 177

Query: 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH 338
             GKQ+G+PM GH+ WIT+LSWEP+  N  CR  AS+ KDG +RIWD +L Q ++VL+SH
Sbjct: 178 INGKQLGKPMTGHRGWITSLSWEPYLRNSDCRHLASASKDGTLRIWDTVLGQTLKVLSSH 237

Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
           T+SVTC++WGG GLIYSASQD+TIKVWR SDGV+CRTLEGHAHWVNTLALST+Y+++   
Sbjct: 238 TKSVTCVKWGGVGLIYSASQDKTIKVWRCSDGVLCRTLEGHAHWVNTLALSTEYVLK--- 294

Query: 399 TSTGGFKYDPANPEESSKH---------ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE 449
             TG F  DP   E    +         AL KY     +GE+LVSGSDDFTLFLW PE E
Sbjct: 295 --TGPF--DPMQAENIDLNADKKYLQEIALLKYNKVNVDGERLVSGSDDFTLFLWKPETE 350

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
           KK LAR+TGHQQLIN V+FSPDGR+IASASFDKSIKLWD + GKF+  LRGHVQAVY++A
Sbjct: 351 KKPLARLTGHQQLINDVKFSPDGRVIASASFDKSIKLWDAKNGKFLGVLRGHVQAVYVIA 410

Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
           WS+DSR LVSGSADSTLKVWN+K K++E +LPGH DEVYAVDWAPDG  VASGGKDK+LR
Sbjct: 411 WSADSRYLVSGSADSTLKVWNIKEKRLEIELPGHADEVYAVDWAPDGCVVASGGKDKLLR 470

Query: 570 L 570
           L
Sbjct: 471 L 471

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|281427382|ref|NP_001163997.1| notchless [Tribolium castaneum] gi|270001244|gb|EEZ97691.1| notchless [Tribolium castaneum]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/425 (65%), Positives = 341/425 (80%), Gaps = 11/425 (2%)

Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVIS 212
           Y+FY N+TEIT +L   L L  LNTE V+DI+YQ+QAVF+VRPVTRCTSSMPGHAEAVIS
Sbjct: 53  YIFYANDTEITHSLEKTLNLSDLNTETVIDILYQQQAVFRVRPVTRCTSSMPGHAEAVIS 112

Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
           V FSP+GR LASGSGDTTVRFWDV TQTP   C+GH +WVLCIAW+P+ ++L S CK+G 
Sbjct: 113 VSFSPDGRHLASGSGDTTVRFWDVDTQTPFKTCKGHTNWVLCIAWAPNGRKLASACKDGK 172

Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
           +  W+   G QIG+ + GHK W+TALSWEP+H N +CR  AS+ KD  +RIWD +L  C 
Sbjct: 173 VVVWNPENGAQIGKTLIGHKSWVTALSWEPYHQNAECRFLASASKDCDVRIWDTVLCSCT 232

Query: 333 RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           RV++ H +SVT ++WGG GL+Y+ASQDRT+KVWRA DGV+CRTLEGH HWVNTLAL+TDY
Sbjct: 233 RVISGHLKSVTVVKWGGLGLLYTASQDRTVKVWRAKDGVLCRTLEGHGHWVNTLALNTDY 292

Query: 393 LMRVEATSTGGFKYDPANPE--ESSKHALAKY-QAQCPEG-EKLVSGSDDFTLFLWNPEK 448
           ++++ A       +DP      +S    L +Y +   P G E+LVSGSDDFTLFLW P K
Sbjct: 293 ILKLGA-------FDPVKDTQIQSQDFVLRRYNEIVNPIGDERLVSGSDDFTLFLWAPSK 345

Query: 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
           +KK L R+TGHQQL+N V+FSPDGRI ASASFDKSIKLW+ + GKFI TLRGHVQAVY++
Sbjct: 346 DKKPLNRLTGHQQLVNDVKFSPDGRIFASASFDKSIKLWEAKSGKFICTLRGHVQAVYVI 405

Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
           ++S+DSRLLVSGSADSTLK+WN++ KK+E DLPGHGDEVYA+DWA DG KVASGGKDKVL
Sbjct: 406 SFSADSRLLVSGSADSTLKLWNLREKKLEIDLPGHGDEVYALDWASDGSKVASGGKDKVL 465

Query: 569 RLWQN 573
           +LWQN
Sbjct: 466 KLWQN 470

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|417411092|gb|JAA51996.1| Putative notchless-like wd40 repeat-containing protein, partial [Desmodus rotundus]

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 284/470 (60%), Positives = 351/470 (74%), Gaps = 15/470 (3%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
           V+F   G  L     D  V   D+T       C          P  FYV++ EI  +L  
Sbjct: 18  VQFQDEGGQLLGSPFDVPV---DITPDKLQLICNALLAQEDPLPLAFYVHDAEIISSLGR 74

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
            L L  + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct: 75  TLELQVVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 134

Query: 229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
           TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STGKQ+G+ +
Sbjct: 135 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRTL 194

Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
            GH +WIT LSWEP H+N +CR  ASS KDG++R+WD  L +C R+LT HT+SVTC+RWG
Sbjct: 195 TGHSKWITGLSWEPLHINPECRYVASSSKDGSVRVWDTTLGRCERILTGHTQSVTCLRWG 254

Query: 349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
           G GL+YSASQDRT+KVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        +P
Sbjct: 255 GDGLLYSASQDRTLKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNP 314

Query: 409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                + +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct: 315 QDVQGSLQELKERALSRYSLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 374

Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
           N V FSPD R++ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct: 375 NQVLFSPDSRVVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 434

Query: 524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           STLKVW+ K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+ 
Sbjct: 435 STLKVWDTKAQKLNTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 484

Source: Desmodus rotundus

Species: Desmodus rotundus

Genus: Desmodus

Family: Phyllostomidae

Order: Chiroptera

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	573
UNIPROTKB|I3LTI2	485	NLE1 "Uncharacterized protein"	0.792	0.936	0.609	3.3e-157
RGD|1308301	487	Nle1 "notchless homolog 1 (Dro	0.792	0.932	0.605	1.1e-156
UNIPROTKB|Q9NVX2	485	NLE1 "Notchless protein homolo	0.792	0.936	0.601	1.1e-156
UNIPROTKB|Q58D20	486	NLE1 "Notchless protein homolo	0.792	0.934	0.603	1.4e-156
UNIPROTKB|F1PUU2	436	NLE1 "Uncharacterized protein"	0.734	0.965	0.645	1.4e-156
MGI|MGI:2429770	485	Nle1 "notchless homolog 1 (Dro	0.792	0.936	0.603	1.8e-156
UNIPROTKB|F1NII4	498	NLE1 "Uncharacterized protein"	0.739	0.851	0.622	1.4e-151
FB|FBgn0021874	488	Nle "Notchless" [Drosophila me	0.736	0.864	0.601	8.1e-147
WB|WBGene00021074	473	W07E6.2 [Caenorhabditis elegan	0.794	0.961	0.561	2.1e-141
TAIR|locus:2176897	473	AT5G52820 "AT5G52820" [Arabido	0.734	0.890	0.574	2.1e-139

UNIPROTKB|I3LTI2 NLE1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
 Identities = 286/469 (60%), Positives = 348/469 (74%)

Query:   116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
             V+F   G  L     D  V   D+T       C          P  FYV++ EI  +L  
Sbjct:    19 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLGK 75

Query:   169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
              L    + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct:    76 TLESQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query:   229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
             TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STGKQ+G+ +
Sbjct:   136 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRAL 195

Query:   289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
              GH +WITALSWEP H N +CR  ASS KDG++R+WD    +C R+LT HT+SVTC+RWG
Sbjct:   196 AGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 255

Query:   349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
             G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        + 
Sbjct:   256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA 315

Query:   409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                  + +E  + AL++Y      G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct:   316 QDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375

Query:   464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
             N V FSPD RIIASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct:   376 NQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435

Query:   524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct:   436 STLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0001826 "inner cell mass cell differentiation" evidence=IEA

RGD|1308301 Nle1 "notchless homolog 1 (Drosophila)" [Rattus norvegicus (taxid:10116)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 284/469 (60%), Positives = 351/469 (74%)

Query:   116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVNETEITKTLAD 168
             V+F   G  L     D  V   D+T       C       E  P  FYV++ EI  +L  
Sbjct:    21 VQFQDEGGQLLGSPFDVPV---DITPDQLQLVCNALLAQDEPLPLAFYVHDAEIVSSLGK 77

Query:   169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
              L   ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct:    78 TLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 137

Query:   229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
             TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STG Q+G+ +
Sbjct:   138 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTL 197

Query:   289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
              GH +WIT LSWEP H+N +CR  ASS KDG++R+WD    +C R+LT HT+SVTC+RWG
Sbjct:   198 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 257

Query:   349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV----EATSTGGF 404
             G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R      A +T   
Sbjct:   258 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA 317

Query:   405 KYDPANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
             +    + +E  + A ++Y     +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct:   318 QDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 377

Query:   464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
             N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct:   378 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 437

Query:   524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct:   438 STLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 486

GO:0001826 "inner cell mass cell differentiation" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0007219 "Notch signaling pathway" evidence=IEA;ISO

UNIPROTKB|Q9NVX2 NLE1 "Notchless protein homolog 1" [Homo sapiens (taxid:9606)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 282/469 (60%), Positives = 348/469 (74%)

Query:   116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
             V+F   G  L     D  V   D+T       C          P  F+V++ EI  +L  
Sbjct:    19 VQFQDEGGQLLGSPFDVPV---DITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGK 75

Query:   169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
              L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct:    76 TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query:   229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
             TTVRFWD++T+TP F C+GH+HWVL I+WSPD ++L SGCKNG I  WD STGKQ+G+ +
Sbjct:   136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTL 195

Query:   289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
              GH +WIT LSWEP H N +CR  ASS KDG++RIWD    +C R+LT HT+SVTC+RWG
Sbjct:   196 AGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWG 255

Query:   349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
             G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        +P
Sbjct:   256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNP 315

Query:   409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                  + +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK L RMTGHQ LI
Sbjct:   316 QDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALI 375

Query:   464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
             N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct:   376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435

Query:   524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct:   436 STLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484

GO:0001826 "inner cell mass cell differentiation" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|Q58D20 NLE1 "Notchless protein homolog 1" [Bos taurus (taxid:9913)]

 Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
 Identities = 283/469 (60%), Positives = 347/469 (73%)

Query:   116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT-------PYLFYVNETEITKTLAD 168
             V+F   G  L     D  V   D+T       C          P  FYV++ EI  +L  
Sbjct:    20 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEDPLPLAFYVHDAEIVSSLGR 76

Query:   169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
              L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct:    77 TLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 136

Query:   229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
             TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG I  WD STGKQ+G+ +
Sbjct:   137 TTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRAL 196

Query:   289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
              GH +WITALSWEP H N +CR  ASS KDG++R+WD    +C R LT H +SVTC+RWG
Sbjct:   197 TGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG 256

Query:   349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP 408
             G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R  A        + 
Sbjct:   257 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA 316

Query:   409 ----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
                  + +E  + AL++Y     +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct:   317 QDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 376

Query:   464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
             N V FSPD R+IASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct:   377 NQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 436

Query:   524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct:   437 STLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 485

GO:0005730 "nucleolus" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0001826 "inner cell mass cell differentiation" evidence=IEA

UNIPROTKB|F1PUU2 NLE1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
 Identities = 275/426 (64%), Positives = 335/426 (78%)

Query:   152 PYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVI 211
             P  FYV++ EIT +L   L    + TE+V+DI+YQ QA+F+VR VTRCTSS+ GH+EAVI
Sbjct:    10 PLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVI 69

Query:   212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG 271
             SV FSP G+ LASGSGDTTVRFWD++T+TP F C+GH+HWVL I+WSPD K L SGCKNG
Sbjct:    70 SVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNG 129

Query:   272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
              I  WD STGKQ+G+ + GH +WIT LSWEP H N +CR  ASS KDG++R+WD    +C
Sbjct:   130 QILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRC 189

Query:   332 VRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
              R+LT HT+SVTC+RWGG GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTD
Sbjct:   190 ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 249

Query:   392 YLMRVEATSTGGFKYDP----ANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNP 446
             Y +R  A        +      + +E    AL +Y     +G E+LVSGSDDFTLF+W+P
Sbjct:   250 YALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSP 309

Query:   447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
              ++KK LARMTGHQ LIN V FSPD RIIASASFDKSIKLWDGR GK++ +LRGHV AVY
Sbjct:   310 AEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVY 369

Query:   507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
              +AWS+DSRLLVSGS+DSTLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK
Sbjct:   370 QIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDK 429

Query:   567 VLRLWQ 572
              LR+W+
Sbjct:   430 CLRIWR 435

GO:0007219 "Notch signaling pathway" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0001826 "inner cell mass cell differentiation" evidence=IEA

MGI|MGI:2429770 Nle1 "notchless homolog 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
 Identities = 283/469 (60%), Positives = 351/469 (74%)

Query:   116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------EGTPYLFYVNETEITKTLAD 168
             V+F   G  L     D  V   D+T       C       E  P  FYV++ EI  +L  
Sbjct:    19 VQFQDEGGQLLGSPFDVPV---DITPDKLQLVCNALLAQEEPLPLAFYVHDAEIVSSLGK 75

Query:   169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
              L   ++ TE++VDI+YQ QAVF+VR VTRCTSS+ GH+EAVISV FSP G+ LASGSGD
Sbjct:    76 TLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGD 135

Query:   229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM 288
             TTVRFWD++T+TP F C+GH+HWVL I+WSPD K+L SGCKNG +  WD STG Q+G+ +
Sbjct:   136 TTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTL 195

Query:   289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG 348
              GH +WIT LSWEP H+N +CR  ASS KDG++R+WD    +C R+LT HT+SVTC+RWG
Sbjct:   196 TGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWG 255

Query:   349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV----EATSTGGF 404
             G GL+YSASQDRTIKVWRA DGV+CRTL+GH HWVNT+ALSTDY +R      A +T   
Sbjct:   256 GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA 315

Query:   405 KYDPANPEESSKHALAKYQAQCPEG-EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI 463
             +    + +E  + A ++Y     +G E+LVSGSDDFTLFLW+P ++KK LARMTGHQ LI
Sbjct:   316 QDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALI 375

Query:   464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD 523
             N V FSPD RI+ASASFDKSIKLWDGR GK++ +LRGHV AVY +AWS+DSRLLVSGS+D
Sbjct:   376 NQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSD 435

Query:   524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             STLKVW++K +K+  DLPGH DEVYAVDW+PDG++VASGGKDK LR+W+
Sbjct:   436 STLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWR 484

GO:0001826 "inner cell mass cell differentiation" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IDA

UNIPROTKB|F1NII4 NLE1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
 Identities = 267/429 (62%), Positives = 332/429 (77%)

Query:   149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
             E  P  F+ ++ EI  +L   L    + TE+V+DI+YQ QAVF+VR VTRCTSS+ GH E
Sbjct:    69 EPVPLAFFFHDAEIVVSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTE 128

Query:   209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
             AVISV FSP G+ LASGSGDTTVRFWD++T+TP F  +GH+HWVL IAWSPD K+L SGC
Sbjct:   129 AVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGC 188

Query:   269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
             KN  I  WD +TG QIG+ + GH +WIT L WEP H+N +CR  AS+ KDG+IRIWD ++
Sbjct:   189 KNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLM 248

Query:   329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
              +C ++LT HT+SVTC++WGG GL+YS+SQDRTIKVWR+ DG++CRTL+GHAHWVNT+AL
Sbjct:   249 GRCDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMAL 308

Query:   389 STDYLMRVEATSTGGFKYDPANPE----ESSKHALAKYQAQCPEG-EKLVSGSDDFTLFL 443
             STDY++R  A        +P +      E    A  +Y     +G E+LVSGSDDFTLFL
Sbjct:   309 STDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFL 368

Query:   444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
             W P ++KK L RMTGHQ LIN V FSPD RIIASASFDKSIKLW+GR GK++T+LRGHV 
Sbjct:   369 WRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428

Query:   504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
             AVY +AWS+DSRLLVSGS+DSTLKVW+ +TKK+  DLPGH DEV+A DW+PDG++VASGG
Sbjct:   429 AVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGG 488

Query:   564 KDKVLRLWQ 572
             KDK LR+W+
Sbjct:   489 KDKCLRIWR 497

GO:0001826 "inner cell mass cell differentiation" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0007219 "Notch signaling pathway" evidence=IEA

FB|FBgn0021874 Nle "Notchless" [Drosophila melanogaster (taxid:7227)]

 Score = 1434 (509.9 bits), Expect = 8.1e-147, P = 8.1e-147
 Identities = 257/427 (60%), Positives = 328/427 (76%)

Query:   149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
             E TPYLF+V E EI K+L D L L +++TE V+DIVYQ QAVF+VRPVTRCTSSMPGHAE
Sbjct:    61 EATPYLFFVGEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAE 120

Query:   209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
             AV+S+ FSP+G  LASGSGDTTVR WD+ T+TP F C GHK WVLC++W+PD K+L SGC
Sbjct:   121 AVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGC 180

Query:   269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
             K G I  WD  TG+Q G+P+ GHK+ I  L+WEP+H + +CR+ AS+  DG  RIWDV L
Sbjct:   181 KAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL 240

Query:   329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
              QC+  +  HT +VT +RWGG+GLIY++S+DRT+K+WRA+DG++CRT  GHAHWVN +AL
Sbjct:   241 GQCLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIAL 300

Query:   389 STDYLMRV---EATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLW 444
             STDY++R             +   + EE  + AL +YQA CP E E LVS SDD TL+LW
Sbjct:   301 STDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLW 360

Query:   445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
                 + K + RMTGHQ ++N V++SPD ++IASASFDKS++LW    G+++ T RGHVQA
Sbjct:   361 R-NNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQA 419

Query:   505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK 564
             VY VAWS+DSRL+VSGS DSTLKVW+++TKK+ Q+LPGH DEV+ VDWAPDG +VASGGK
Sbjct:   420 VYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGK 479

Query:   565 DKVLRLW 571
             DKV++LW
Sbjct:   480 DKVIKLW 486

GO:0007219 "Notch signaling pathway" evidence=ISS;TAS

GO:0005112 "Notch binding" evidence=TAS

WB|WBGene00021074 W07E6.2 [Caenorhabditis elegans (taxid:6239)]

 Score = 1383 (491.9 bits), Expect = 2.1e-141, P = 2.1e-141
 Identities = 264/470 (56%), Positives = 331/470 (70%)

Query:   114 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE---GT-----PYLFYVNE-TEITK 164
             ISV F     +   GSG   V   D++T      C    G+     P  F+  E  EI  
Sbjct:     7 ISVSFVSEDENELGGSG-ILVPV-DISTNELQILCNQLLGSSDDPVPISFFTTEGAEIVD 64

Query:   165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
             ++     L+ ++ E  + +VYQ QAVF+VRPVTRC++S+PGH E VIS +FSP+GR LAS
Sbjct:    65 SIRK--SLEEIDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLAS 122

Query:   225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
             GSGD T+R WD+  + PL  C+ HK WVLCIAWSPD+ ++ S CKNG I  W++ TG+QI
Sbjct:   123 GSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQI 182

Query:   285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
             G+ ++ HKQWIT+L+W+P H +  CR  AS GKDG I IWD +    VR L+ HT SVTC
Sbjct:   183 GKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTC 242

Query:   345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF 404
             +RWGG GLIYS SQDRT+K+WRA DGVMCR + GHAHW+NTLAL+TDY +R         
Sbjct:   243 LRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKR 302

Query:   405 KYDPANPEESSKHALAKYQA--QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL 462
                P   EE  K A  +Y+A  +   GE+LVSGSDDFTLF+WNP++ K+S+ RMTGH QL
Sbjct:   303 CIKPDTVEECQKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQL 362

Query:   463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
             +N V FSPD R IASASFDKS+KLW GR GK++ +LRGHV  VY VAWS+DSRLLVSGSA
Sbjct:   363 VNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSA 422

Query:   523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             DSTLKV+ +KTK +  DLPGHGDEV+ VDW+P+G KV SGGKDKVL+LW+
Sbjct:   423 DSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLWR 472

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

TAIR|locus:2176897 AT5G52820 "AT5G52820" [Arabidopsis thaliana (taxid:3702)]

 Score = 1364 (485.2 bits), Expect = 2.1e-139, P = 2.1e-139
 Identities = 244/425 (57%), Positives = 321/425 (75%)

Query:   149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
             E  PY FYV++ E+   +   L  + ++ E+V+ IVYQ+QAVF++RPV RC+ ++ GHAE
Sbjct:    51 EMLPYSFYVSDEELLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAE 110

Query:   209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
             AV+ V FSP+G+ LASGSGDTTVR WD+ T+TPLF C+GHK+WVL +AWSPD K LVSG 
Sbjct:   111 AVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGS 170

Query:   269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
             K+G I  W+   G+  G P+ GHK+WIT +SWEP HL+  CRRF +S KDG  RIWD+ L
Sbjct:   171 KSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITL 230

Query:   329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
              + +  L+ HT +VTC++WGG G+IY+ SQD TIK+W  + G + R L+GH HW+N+LAL
Sbjct:   231 KKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLAL 290

Query:   389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKY-QAQCPEGEKLVSGSDDFTLFLWNPE 447
             ST+Y++R  A    G +Y P N EE  K AL +Y + +    E+LVSGSDDFT+FLW P 
Sbjct:   291 STEYVLRTGAFDHTGRQYPP-N-EEKQK-ALERYNKTKGDSPERLVSGSDDFTMFLWEPS 347

Query:   448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM 507
               K+   R+TGHQQL+N V FSPDG+ IASASFDKS++LW+G  G+F+T  RGHV  VY 
Sbjct:   348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQ 407

Query:   508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV 567
             V+WS+DSRLL+SGS DSTLK+W ++TKK++QDLPGH DEV+AVDW+PDGEKV SGGKD+V
Sbjct:   408 VSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRV 467

Query:   568 LRLWQ 572
             L+LW+
Sbjct:   468 LKLWK 472

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

GO:0051604 "protein maturation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FLX9	NLE1_ARATH	No assigned EC number	0.5623	0.7382	0.8942	yes	N/A
Q5RFF8	NLE1_PONAB	No assigned EC number	0.6021	0.7940	0.9381	yes	N/A
Q9NVX2	NLE1_HUMAN	No assigned EC number	0.6	0.7940	0.9381	yes	N/A
Q8VEJ4	NLE1_MOUSE	No assigned EC number	0.5995	0.7818	0.9237	yes	N/A
O74855	NLE1_SCHPO	No assigned EC number	0.4756	0.7329	0.8366	yes	N/A
Q58D20	NLE1_BOVIN	No assigned EC number	0.6016	0.7818	0.9218	yes	N/A
P25382	NLE1_YEAST	No assigned EC number	0.5165	0.7207	0.8019	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	573
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	9e-80
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-78
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-58
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-53
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-53
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-50
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-35
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-26
pfam08154	64	pfam08154, NLE, NLE (NUC135) domain	1e-13
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	6e-09
smart00320	40	smart00320, WD40, WD40 repeats	6e-09
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	9e-09
smart00320	40	smart00320, WD40, WD40 repeats	1e-08
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	2e-08
smart00320	40	smart00320, WD40, WD40 repeats	3e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-08
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	4e-08
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	8e-08
smart00320	40	smart00320, WD40, WD40 repeats	2e-07
smart00320	40	smart00320, WD40, WD40 repeats	2e-07
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	8e-07
smart00320	40	smart00320, WD40, WD40 repeats	9e-07
smart00320	40	smart00320, WD40, WD40 repeats	2e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-06
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	3e-06
PTZ00421	493	PTZ00421, PTZ00421, coronin; Provisional	4e-06
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	5e-06
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	1e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	2e-04
smart00320	40	smart00320, WD40, WD40 repeats	3e-04
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	4e-04
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	0.002
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	0.002

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  252 bits (645), Expect = 9e-80
 Identities = 114/333 (34%), Positives = 170/333 (51%), Gaps = 45/333 (13%)

Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
              ++ GH   V  V FSP+G+ LA+GSGD T++ WD+ T   L   +GH   V  +A S
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
            D   L SG  +  I  WD  TG+ +   + GH  +++++++     +   R  +SS +D
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECVRT-LTGHTSYVSSVAF-----SPDGRILSSSSRD 114

Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE 377
             I++WDV   +C+  L  HT  V  + +   G  + S+SQD TIK+W    G    TL 
Sbjct: 115 KTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLT 174

Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437
           GH   VN++A S                                     P+GEKL+S S 
Sbjct: 175 GHTGEVNSVAFS-------------------------------------PDGEKLLSSSS 197

Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
           D T+ LW+     K L  + GH+  +N V FSPDG ++AS S D +I++WD R G+ + T
Sbjct: 198 DGTIKLWDL-STGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQT 256

Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
           L GH  +V  +AWS D + L SGSAD T+++W+
Sbjct: 257 LSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  248 bits (635), Expect = 2e-78
 Identities = 119/328 (36%), Positives = 170/328 (51%), Gaps = 45/328 (13%)

Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
           +GH   V C+A+SPD K L +G  +G I  WD  TG+ +   ++GH   +  ++      
Sbjct: 6   KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRT-LKGHTGPVRDVAASADG- 63

Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV 364
                  AS   D  IR+WD+   +CVR LT HT  V+ + +   G ++ S+S+D+TIKV
Sbjct: 64  ----TYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV 119

Query: 365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA 424
           W    G    TL GH  WVN++A S D          G F                    
Sbjct: 120 WDVETGKCLTTLRGHTDWVNSVAFSPD----------GTF-------------------- 149

Query: 425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
                  + S S D T+ LW+    K  +A +TGH   +N V FSPDG  + S+S D +I
Sbjct: 150 -------VASSSQDGTIKLWDLRTGK-CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTI 201

Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
           KLWD   GK + TLRGH   V  VA+S D  LL SGS D T++VW+++T +  Q L GH 
Sbjct: 202 KLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHT 261

Query: 545 DEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           + V ++ W+PDG+++ASG  D  +R+W 
Sbjct: 262 NSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  196 bits (499), Expect = 3e-58
 Identities = 88/242 (36%), Positives = 122/242 (50%), Gaps = 39/242 (16%)

Query: 331 CVRVLTSHTRSVTCIRW-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
             R L  HT  VTC+ +     L+ + S D TIKVW    G + RTL+GH   V  +A  
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVA-- 58

Query: 390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE 449
                                                 +G  L SGS D T+ LW+ E  
Sbjct: 59  -----------------------------------ASADGTYLASGSSDKTIRLWDLETG 83

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
           +  +  +TGH   ++ V FSPDGRI++S+S DK+IK+WD   GK +TTLRGH   V  VA
Sbjct: 84  EC-VRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVA 142

Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
           +S D   + S S D T+K+W+++T K    L GH  EV +V ++PDGEK+ S   D  ++
Sbjct: 143 FSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIK 202

Query: 570 LW 571
           LW
Sbjct: 203 LW 204

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  188 bits (478), Expect = 2e-53
 Identities = 138/472 (29%), Positives = 224/472 (47%), Gaps = 73/472 (15%)

Query: 103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI 162
           +  + GH +++ S+ FSP+G  L SGS D T++ WD+     L K     +   V+  ++
Sbjct: 58  SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVS--KL 115

Query: 163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL 222
             +  D   +   ++     +      ++ +    +   ++ GH+E+V S+ FSP+G+ L
Sbjct: 116 ALSSPDGNSILLASSSLDGTVK-----LWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLL 170

Query: 223 ASGSG-DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSST 280
           ASGS  D T++ WD+ T  PL    GH   V  +A+SPD    + SG  +G I  WD ST
Sbjct: 171 ASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLST 230

Query: 281 GKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-ILSQCVRVLTSH 338
           GK +   + GH    +++ S +           AS   DG IR+WD+   S  +R L+ H
Sbjct: 231 GKLLRSTLSGHSDSVVSSFSPDG-------SLLASGSSDGTIRLWDLRSSSSLLRTLSGH 283

Query: 339 TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDG--VMCRTLEGHAHWVNTLALSTDYLMR 395
           + SV  + +   G L+ S S D T+++W    G  +   TL+GH   V++L+ S      
Sbjct: 284 SSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFS------ 337

Query: 396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG-SDDFTLFLWNPEKEKKSLA 454
                                          P+G  LVSG SDD T+ LW+    K    
Sbjct: 338 -------------------------------PDGSLLVSGGSDDGTIRLWDLRTGKPLK- 365

Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
                   +  V FSPDGR+++S S D +++LWD   G  +  L GH   V  + +S D 
Sbjct: 366 -TLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDG 424

Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
           + L SGS+D+T+++W++KT             + +V ++PDG+ +AS   D 
Sbjct: 425 KSLASGSSDNTIRLWDLKTS------------LKSVSFSPDGKVLASKSSDL 464

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  186 bits (473), Expect = 8e-53
 Identities = 119/383 (31%), Positives = 187/383 (48%), Gaps = 54/383 (14%)

Query: 200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAW 257
           +  + GH +++ S+ FSP+G  L SGS D T++ WD+     L K     H   V  +A 
Sbjct: 58  SLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLAL 117

Query: 258 -SPDSKQLVSGCK--NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
            SPD   ++      +G +  WD ST  ++ + + GH + +T+L++ P          + 
Sbjct: 118 SSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLL----ASG 173

Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVM 372
           S  DG I++WD+   + +  L  HT  V+ + +   G  LI S S D TI++W  S G +
Sbjct: 174 SSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKL 233

Query: 373 CR-TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
            R TL GH+  V +                                         P+G  
Sbjct: 234 LRSTLSGHSDSVVSSF--------------------------------------SPDGSL 255

Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
           L SGS D T+ LW+       L  ++GH   +  V FSPDG+++AS S D +++LWD   
Sbjct: 256 LASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLET 315

Query: 492 GKFI--TTLRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY 548
           GK +   TL+GH   V  +++S D S L+  GS D T+++W+++T K  + L GH   V 
Sbjct: 316 GKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVL 374

Query: 549 AVDWAPDGEKVASGGKDKVLRLW 571
           +V ++PDG  V+SG  D  +RLW
Sbjct: 375 SVSFSPDGRVVSSGSTDGTVRLW 397

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  175 bits (446), Expect = 1e-50
 Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 24/262 (9%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-TPYLFYVNETEITKTL 166
           GH   V  V  S +G  LASGS D T+R WD+ T   +    G T Y+  V         
Sbjct: 49  GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSV--------- 99

Query: 167 ADVLPLDTLNTEEVVDIVYQKQA-VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
               P   +    +      K   V+ V    +C +++ GH + V SV FSP+G  +AS 
Sbjct: 100 -AFSPDGRI----LSSSSRDKTIKVWDVET-GKCLTTLRGHTDWVNSVAFSPDGTFVASS 153

Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
           S D T++ WD+ T   +    GH   V  +A+SPD ++L+S   +G I  WD STGK +G
Sbjct: 154 SQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLG 213

Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
             +RGH+  + ++++ P          AS  +DG IR+WD+   +CV+ L+ HT SVT +
Sbjct: 214 T-LRGHENGVNSVAFSPDGYL-----LASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSL 267

Query: 346 RWGGSG-LIYSASQDRTIKVWR 366
            W   G  + S S D TI++W 
Sbjct: 268 AWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  139 bits (349), Expect = 1e-35
 Identities = 114/397 (28%), Positives = 186/397 (46%), Gaps = 73/397 (18%)

Query: 93  VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTPLFKCEG- 150
           ++ +    +   ++ GH+E+V S+ FSP+G+ LASGS  D T++ WD+ T  PL    G 
Sbjct: 138 LWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGH 197

Query: 151 TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV 210
           T  +  +  +     L      D                ++ +       S++ GH+++V
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIR------------LWDLSTGKLLRSTLSGHSDSV 245

Query: 211 ISVKFSPNGRSLASGSGDTTVRFWDV-TTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
           +S  FSP+G  LASGS D T+R WD+ ++ + L    GH   VL +A+SPD K L SG  
Sbjct: 246 VSS-FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSS 304

Query: 270 NGVIHAWDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
           +G +  WD  TGK +    ++GH+  +++LS+ P          +    DG IR+WD+  
Sbjct: 305 DGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSP----DGSLLVSGGSDDGTIRLWDLRT 360

Query: 329 SQCVRVLTSHTRSVTCIRWGGSGLIYS-ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
            + ++ L  H+ +V  + +   G + S  S D T+++W  S G + R L+GH   V +L 
Sbjct: 361 GKPLKTLEGHS-NVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLD 419

Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
            S                                     P+G+ L SGS D T+ LW+ +
Sbjct: 420 FS-------------------------------------PDGKSLASGSSDNTIRLWDLK 442

Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI 484
              KS++             FSPDG+++AS S D S+
Sbjct: 443 TSLKSVS-------------FSPDGKVLASKSSDLSV 466

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  108 bits (272), Expect = 3e-26
 Identities = 61/177 (34%), Positives = 90/177 (50%), Gaps = 13/177 (7%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
           +C +++ GH + V SV FSP+G  +AS S D T++ WD+ T   +    G  +   VN  
Sbjct: 126 KCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG--HTGEVNSV 183

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
             +     +L   +  T ++ D+              +C  ++ GH   V SV FSP+G 
Sbjct: 184 AFSPDGEKLLSSSSDGTIKLWDL-----------STGKCLGTLRGHENGVNSVAFSPDGY 232

Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
            LASGS D T+R WD+ T   +    GH + V  +AWSPD K+L SG  +G I  WD
Sbjct: 233 LLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|219730 pfam08154, NLE, NLE (NUC135) domain

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 12 RILTRFKSDDG--EVAGDLLDLPLNVNTEHLSLIVNSLLQQDEGTPYLFYVNETEITKTL 69
          ++  +F +++G  EV G    +P N+  + LS ++N LL+ +E  P+ F +N  E+  +L
Sbjct: 1  QVQVQFVTEEGDYEVPGTPFLVPTNLTRDGLSELLNQLLENEEPVPFDFLINGEELRTSL 60

Query: 70 ADVL 73
           + L
Sbjct: 61 DEYL 64

This domain is located N terminal to WD40 repeats. It is found in the microtubule-associated yeast protein YTM1. Length = 64

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
            K L  + GH   +  V FSPDG ++AS S D ++++WD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 51.5 bits (124), Expect = 6e-09
 Identities = 18/39 (46%), Positives = 24/39 (61%)

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
            + L  + GH   +  V FSPDG+ +AS S D +IKLWD
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 50.8 bits (122), Expect = 9e-09
 Identities = 20/39 (51%), Positives = 26/39 (66%)

Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
           GK + TL+GH   V  VA+S D  LL SGS D T++VW+
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 18/39 (46%), Positives = 26/39 (66%)

Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
           G+ + TL+GH   V  VA+S D + L SGS D T+K+W+
Sbjct: 2   GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 57.0 bits (137), Expect = 2e-08
 Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 40/180 (22%)

Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRAS 368
           + ASS  +G +++WDV  SQ V  +  H + V  I +  +   L+ S S D ++K+W  +
Sbjct: 547 QVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN 606

Query: 369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE 428
            GV   T++                                     +K  +   Q     
Sbjct: 607 QGVSIGTIK-------------------------------------TKANICCVQFPSES 629

Query: 429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
           G  L  GS D  ++ ++    K  L  M GH + ++ V F  D   + S+S D ++KLWD
Sbjct: 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWD 688

Length = 793

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 16/40 (40%), Positives = 21/40 (52%)

Query: 238 TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
           +   L   +GH   V  +A+SPD K L SG  +G I  WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
             L   +GH   V  +A+SPD   L SG  +G +  WD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
           +   ++ GH   V SV FSP+G  LASGS D TVR WD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
           +   ++ GH   V SV FSP+G  LASGS D TVR WD
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 54.5 bits (131), Expect = 8e-08
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 430 EKLVSGSDDFTLFLWN-PEKEKKS-----LARMTGHQQLINCVEFSPDGR-IIASASFDK 482
           +KL + S+D T+  W  PE+         +  + GH + +  V F P    ++ASA  D 
Sbjct: 89  QKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148

Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
            + +WD   GK +  ++ H   +  + W+ D  LL + S D  L + + +   I
Sbjct: 149 VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTI 202

Length = 493

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
               ++ GH   V SV FSP+G+ LASGS D T++ WD
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
               ++ GH   V SV FSP+G+ LASGS D T++ WD
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            K+ + L GH   V +V ++PDG  +ASG  D  +R+W
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 45.4 bits (108), Expect = 9e-07
 Identities = 14/39 (35%), Positives = 25/39 (64%)

Query: 533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           + ++ + L GH   V +V ++PDG+ +ASG  D  ++LW
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 330 QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
           + ++ L  HT  VT + +   G  + S S D TIK+W
Sbjct: 3   ELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.5 bits (103), Expect = 3e-06
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 330 QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
           + +R L  HT  VT + +   G L+ S S D T++VW
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 49.5 bits (118), Expect = 3e-06
 Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 14/143 (9%)

Query: 247 GHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWD-------SSTGKQIGQPMRGHKQWITAL 298
           G +  ++ +A++P D ++L +  ++G I  W         +    I   ++GH + +  +
Sbjct: 73  GQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVH-LQGHTKKVGIV 131

Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS 357
           S+ P  +N      AS+G D  + +WDV   + V V+  H+  +T + W   G L+ + S
Sbjct: 132 SFHPSAMN----VLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTS 187

Query: 358 QDRTIKVWRASDGVMCRTLEGHA 380
           +D+ + +    DG +  ++E HA
Sbjct: 188 KDKKLNIIDPRDGTIVSSVEAHA 210

Length = 493

>gnl|CDD|173611 PTZ00421, PTZ00421, coronin; Provisional

 Score = 49.1 bits (117), Expect = 4e-06
 Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 466 VEFSP-DGRIIASASFDKSIKLWD-------GRIGKFITTLRGHVQAVYMVAW-SSDSRL 516
           V F+P D + + +AS D +I  W          I   I  L+GH + V +V++  S   +
Sbjct: 81  VAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNV 140

Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
           L S  AD  + VW+++  K  + +  H D++ +++W  DG  + +  KDK L +
Sbjct: 141 LASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNI 194

Length = 493

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 49.3 bits (117), Expect = 5e-06
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGR 490
           L SGSDD ++ LW+   +  S+  +      I CV+F  + GR +A  S D  +  +D R
Sbjct: 591 LASGSDDGSVKLWSIN-QGVSIGTIKTKAN-ICCVQFPSESGRSLAFGSADHKVYYYDLR 648

Query: 491 IGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM 531
             K  + T+ GH + V  V +  DS  LVS S D+TLK+W++
Sbjct: 649 NPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDL 689

Length = 793

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 12/104 (11%)

Query: 231 VRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWD----SSTGKQIG 285
           +R  +   + P+ K +GH   +L + ++P  S+ L SG ++  I  W+      + K+I 
Sbjct: 56  IRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIK 115

Query: 286 QP---MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
            P   ++GHK+ I+ + W P +    C    SSG D  + IWD+
Sbjct: 116 DPQCILKGHKKKISIIDWNPMNYYIMC----SSGFDSFVNIWDI 155

Length = 568

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
           ++GH   +T++++     +      AS   DG +R+WD
Sbjct: 7   LKGHTGPVTSVAF-----SPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 43.9 bits (103), Expect = 2e-04
 Identities = 19/58 (32%), Positives = 39/58 (67%), Gaps = 1/58 (1%)

Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNM 531
           +AS++F+  +++WD    + +T ++ H + V+ + +SS D  LL SGS D ++K+W++
Sbjct: 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI 605

Length = 793

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
           ++GH   +T++++     +   +  AS   DG I++WD
Sbjct: 8   LKGHTGPVTSVAF-----SPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 42.8 bits (100), Expect = 4e-04
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 453 LARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS 511
           +  M  H++ +  +++S  D  ++AS S D S+KLW    G  I T++     +  V + 
Sbjct: 568 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFP 626

Query: 512 SDS-RLLVSGSADSTLKVWNMKTKKIEQ-DLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
           S+S R L  GSAD  +  ++++  K+    + GH   V  V +  D   + S   D  L+
Sbjct: 627 SESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLK 685

Query: 570 LW 571
           LW
Sbjct: 686 LW 687

Length = 793

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 19/201 (9%)

Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSST 280
           +AS + +  V+ WDV     + + + H+  V  I +S  D   L SG  +G +  W  + 
Sbjct: 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 607

Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV---ILSQCVRVLTS 337
           G  IG      K  I  + +     +   R  A    D  +  +D+    L  C   +  
Sbjct: 608 GVSIGTIKT--KANICCVQFP----SESGRSLAFGSADHKVYYYDLRNPKLPLC--TMIG 659

Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM------CRTLEGHAHWVNTLALS-T 390
           H+++V+ +R+  S  + S+S D T+K+W  S  +         +  GH +  N + LS +
Sbjct: 660 HSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVS 719

Query: 391 DYLMRVEATSTGGFKYDPANP 411
           D  +   + +   F Y  A P
Sbjct: 720 DGYIATGSETNEVFVYHKAFP 740

Length = 793

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 8/67 (11%)

Query: 430 EKLVSGSDDFTLFLW-------NPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFD 481
           E L SGS+D T+ +W       + ++ K     + GH++ I+ ++++P +  I+ S+ FD
Sbjct: 88  EILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD 147

Query: 482 KSIKLWD 488
             + +WD
Sbjct: 148 SFVNIWD 154

Length = 568

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	573
KOG0271|consensus	480		100.0
KOG0313|consensus	423		100.0
KOG0271|consensus	480		100.0
KOG0318|consensus	603		100.0
KOG0319|consensus	775		100.0
KOG0272|consensus	459		100.0
KOG0319|consensus	775		100.0
KOG0286|consensus	343		100.0
KOG0286|consensus	343		100.0
KOG0279|consensus	315		100.0
KOG0291|consensus	893		100.0
KOG0272|consensus	459		100.0
KOG0273|consensus	524		100.0
KOG0273|consensus	524		100.0
KOG0295|consensus	406		100.0
KOG0306|consensus	888		100.0
KOG0296|consensus	399		100.0
KOG0295|consensus	406		100.0
KOG0315|consensus	311		100.0
KOG0645|consensus	312		100.0
KOG0291|consensus	893		100.0
KOG0296|consensus	399		100.0
KOG0318|consensus	603		100.0
KOG0285|consensus	460		100.0
KOG0265|consensus	338		100.0
KOG0276|consensus	794		100.0
KOG0315|consensus	311		100.0
KOG0306|consensus	888		100.0
KOG0285|consensus	460		100.0
KOG0263|consensus	707		100.0
KOG0284|consensus	464		100.0
KOG0263|consensus	707		100.0
KOG0265|consensus	338		100.0
KOG0281|consensus	499		100.0
KOG0266|consensus	456		100.0
KOG0266|consensus	456		100.0
KOG1063|consensus	764		100.0
KOG0316|consensus	307		100.0
KOG0281|consensus	499		100.0
KOG0279|consensus	315		100.0
KOG0284|consensus	464		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0293|consensus	519		100.0
KOG0293|consensus	519		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0282|consensus	503		100.0
KOG2106|consensus	626		100.0
KOG0276|consensus	794		100.0
KOG0292|consensus	1202		100.0
KOG1408|consensus	1080		100.0
KOG0282|consensus	503		100.0
KOG1063|consensus	764		100.0
KOG0278|consensus	334		100.0
KOG0277|consensus	311		100.0
KOG0645|consensus	312		100.0
KOG0292|consensus	1202		100.0
KOG1539|consensus	910		100.0
KOG0643|consensus	327		100.0
KOG0277|consensus	311		100.0
KOG0274|consensus	537		100.0
KOG0278|consensus	334		100.0
KOG0300|consensus	481		100.0
KOG0275|consensus	508		100.0
KOG0275|consensus	508		100.0
KOG0300|consensus	481		100.0
KOG0288|consensus	459		100.0
KOG0274|consensus	537		100.0
KOG0643|consensus	327		100.0
KOG0640|consensus	430		100.0
KOG0301|consensus	745		100.0
KOG0316|consensus	307		100.0
KOG1446|consensus	311		100.0
KOG1407|consensus	313		100.0
KOG1407|consensus	313		99.98
KOG0299|consensus	479		99.98
KOG0973|consensus	942		99.98
KOG0305|consensus	484		99.97
KOG0310|consensus	487		99.97
KOG0301|consensus	745		99.97
KOG0772|consensus	641		99.97
KOG0641|consensus	350		99.97
KOG0268|consensus	433		99.97
KOG1539|consensus	910		99.97
KOG0305|consensus	484		99.97
KOG0283|consensus	712		99.97
KOG0313|consensus	423		99.97
KOG0310|consensus	487		99.97
KOG0308|consensus	735		99.97
KOG0283|consensus	712		99.97
KOG0299|consensus	479		99.97
KOG0289|consensus	506		99.97
KOG2048|consensus	691		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0772|consensus	641		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0647|consensus	347		99.96
KOG1408|consensus	1080		99.96
KOG2096|consensus	420		99.96
KOG2048|consensus	691		99.96
KOG0640|consensus	430		99.96
KOG0268|consensus	433		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG0308|consensus	735		99.96
KOG0647|consensus	347		99.96
PTZ00420	568	coronin; Provisional	99.96
KOG1445|consensus	1012		99.96
KOG0641|consensus	350		99.96
KOG1036|consensus	323		99.96
KOG0289|consensus	506		99.96
KOG2106|consensus	626		99.96
KOG1446|consensus	311		99.96
KOG0294|consensus	362		99.96
KOG4283|consensus	397		99.96
KOG0646|consensus	476		99.95
KOG1332|consensus	299		99.95
KOG1332|consensus	299		99.95
KOG1036|consensus	323		99.95
KOG0650|consensus	733		99.95
KOG0264|consensus	422		99.95
KOG2096|consensus	420		99.95
KOG0294|consensus	362		99.95
KOG0264|consensus	422		99.94
KOG0973|consensus	942		99.94
KOG2445|consensus	361		99.94
KOG0288|consensus	459		99.94
KOG0639|consensus	705		99.94
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.94
KOG0650|consensus	733		99.94
KOG4283|consensus	397		99.93
KOG0267|consensus	825		99.93
KOG0269|consensus	839		99.93
COG2319	466	FOG: WD40 repeat [General function prediction only	99.93
KOG1274|consensus	933		99.93
KOG2445|consensus	361		99.93
KOG2055|consensus	514		99.93
KOG1009|consensus	434		99.93
KOG0267|consensus	825		99.92
KOG4328|consensus	498		99.92
KOG0639|consensus	705		99.92
KOG1273|consensus	405		99.92
KOG2055|consensus	514		99.92
KOG0646|consensus	476		99.92
KOG1273|consensus	405		99.91
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.91
KOG1274|consensus	933		99.91
KOG0321|consensus	720		99.9
KOG4378|consensus	673		99.9
KOG0321|consensus	720		99.9
KOG0269|consensus	839		99.89
COG2319	466	FOG: WD40 repeat [General function prediction only	99.89
KOG0270|consensus	463		99.88
KOG0302|consensus	440		99.88
KOG0302|consensus	440		99.88
KOG0270|consensus	463		99.87
KOG0322|consensus	323		99.87
KOG1009|consensus	434		99.87
KOG0644|consensus	1113		99.87
KOG2919|consensus	406		99.86
KOG1034|consensus	385		99.86
KOG1034|consensus	385		99.86
KOG4378|consensus	673		99.85
KOG1445|consensus	1012		99.85
KOG2919|consensus	406		99.85
KOG1538|consensus	1081		99.85
KOG1538|consensus	1081		99.85
KOG0307|consensus	1049		99.85
KOG0642|consensus	577		99.85
KOG1963|consensus	792		99.84
KOG0644|consensus	1113		99.84
KOG0322|consensus	323		99.84
KOG0642|consensus	577		99.83
KOG0307|consensus	1049		99.83
KOG4227|consensus	609		99.82
KOG4328|consensus	498		99.82
KOG4227|consensus	609		99.82
KOG1007|consensus	370		99.81
KOG1007|consensus	370		99.81
KOG1188|consensus	376		99.81
KOG1188|consensus	376		99.79
KOG1334|consensus	559		99.79
KOG1310|consensus	758		99.79
KOG0303|consensus	472		99.79
KOG0649|consensus	325		99.78
KOG1517|consensus	1387		99.78
KOG1517|consensus	1387		99.78
KOG1334|consensus	559		99.77
KOG0771|consensus	398		99.77
KOG1524|consensus	737		99.77
KOG1587|consensus	555		99.77
KOG0303|consensus	472		99.74
KOG1963|consensus	792		99.73
KOG0290|consensus	364		99.73
KOG1587|consensus	555		99.73
PRK11028	330	6-phosphogluconolactonase; Provisional	99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.71
PRK11028	330	6-phosphogluconolactonase; Provisional	99.71
KOG0290|consensus	364		99.71
KOG1523|consensus	361		99.7
KOG0649|consensus	325		99.69
KOG2110|consensus	391		99.69
KOG1524|consensus	737		99.69
KOG0771|consensus	398		99.69
KOG4497|consensus	447		99.69
KOG1240|consensus	1431		99.68
KOG2111|consensus	346		99.67
KOG2394|consensus	636		99.67
PRK01742	429	tolB translocation protein TolB; Provisional	99.67
KOG1240|consensus	1431		99.65
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.65
KOG2110|consensus	391		99.63
KOG1310|consensus	758		99.62
PF08154	65	NLE: NLE (NUC135) domain; InterPro: IPR012972 This	99.6
KOG2394|consensus	636		99.59
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.59
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.58
KOG3881|consensus	412		99.58
KOG4497|consensus	447		99.57
KOG1523|consensus	361		99.54
PRK03629	429	tolB translocation protein TolB; Provisional	99.53
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.53
KOG1272|consensus	545		99.52
KOG2315|consensus	566		99.52
PRK02889	427	tolB translocation protein TolB; Provisional	99.51
KOG1272|consensus	545		99.51
KOG0974|consensus	967		99.5
PRK04922	433	tolB translocation protein TolB; Provisional	99.49
KOG1354|consensus	433		99.47
PRK03629	429	tolB translocation protein TolB; Provisional	99.47
KOG0974|consensus	967		99.47
KOG3881|consensus	412		99.47
KOG2111|consensus	346		99.46
PRK05137	435	tolB translocation protein TolB; Provisional	99.45
KOG2321|consensus	703		99.45
KOG2315|consensus	566		99.45
KOG2139|consensus	445		99.43
PRK04922	433	tolB translocation protein TolB; Provisional	99.42
KOG2139|consensus	445		99.41
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.39
KOG1409|consensus	404		99.38
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.37
KOG1912|consensus	1062		99.37
KOG2314|consensus	698		99.37
PRK02889	427	tolB translocation protein TolB; Provisional	99.36
KOG2321|consensus	703		99.36
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.34
KOG4547|consensus	541		99.34
KOG2041|consensus	1189		99.34
PRK05137	435	tolB translocation protein TolB; Provisional	99.31
KOG4547|consensus	541		99.28
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.27
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.25
KOG0280|consensus	339		99.24
KOG2314|consensus	698		99.24
KOG1354|consensus	433		99.23
KOG1064|consensus	2439		99.23
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.22
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.22
PRK04792	448	tolB translocation protein TolB; Provisional	99.21
PRK00178	430	tolB translocation protein TolB; Provisional	99.21
KOG0309|consensus	1081		99.16
PRK01029	428	tolB translocation protein TolB; Provisional	99.14
PRK04792	448	tolB translocation protein TolB; Provisional	99.12
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.12
KOG4190|consensus	1034		99.11
KOG4190|consensus	1034		99.1
PRK00178	430	tolB translocation protein TolB; Provisional	99.09
KOG1912|consensus	1062		99.09
KOG1409|consensus	404		99.09
KOG1064|consensus	2439		99.08
KOG0280|consensus	339		99.07
COG4946	668	Uncharacterized protein related to the periplasmic	99.06
PRK01029	428	tolB translocation protein TolB; Provisional	99.05
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.04
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.04
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.03
KOG4532|consensus	344		99.01
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.01
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.97
KOG2041|consensus	1189		98.93
KOG3914|consensus	390		98.93
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.93
KOG0309|consensus	1081		98.92
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.89
COG4946	668	Uncharacterized protein related to the periplasmic	98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.87
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.86
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.85
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.84
KOG3914|consensus	390		98.84
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.83
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.78
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.76
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.72
KOG4532|consensus	344		98.71
KOG4714|consensus	319		98.64
KOG2695|consensus	425		98.62
KOG4714|consensus	319		98.6
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.59
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.57
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.53
KOG0882|consensus	558		98.53
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	98.53
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.49
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.49
PRK04043	419	tolB translocation protein TolB; Provisional	98.47
KOG2695|consensus	425		98.45
PRK04043	419	tolB translocation protein TolB; Provisional	98.44
KOG0882|consensus	558		98.32
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.3
KOG1275|consensus	1118		98.27
KOG1920|consensus	1265		98.25
KOG1832|consensus	1516		98.23
KOG1645|consensus	463		98.17
KOG1275|consensus	1118		98.1
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.08
KOG1832|consensus	1516		98.08
KOG3617|consensus	1416		98.07
KOG2066|consensus	846		98.04
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.0
KOG1920|consensus	1265		97.98
KOG2066|consensus	846		97.93
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	97.91
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	97.9
KOG3617|consensus	1416		97.83
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.83
PRK02888	635	nitrous-oxide reductase; Validated	97.83
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.81
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.8
KOG2114|consensus	933		97.76
KOG2114|consensus	933		97.73
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.69
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.69
KOG3621|consensus	726		97.64
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.57
KOG4649|consensus	354		97.54
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.51
KOG4640|consensus	665		97.51
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.47
KOG3621|consensus	726		97.45
KOG4649|consensus	354		97.44
PRK02888	635	nitrous-oxide reductase; Validated	97.44
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	97.41
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.41
KOG4640|consensus	665		97.36
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.35
KOG1645|consensus	463		97.32
PRK13616	591	lipoprotein LpqB; Provisional	97.3
KOG2444|consensus	238		97.25
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.2
KOG2444|consensus	238		97.17
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.14
KOG2395|consensus	644		97.07
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.06
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	96.97
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.93
KOG1008|consensus	783		96.79
KOG2395|consensus	644		96.75
KOG2079|consensus	1206		96.61
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.51
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.49
KOG1008|consensus	783		96.49
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	96.47
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	96.42
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	96.39
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.34
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	96.34
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.16
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.16
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.16
PRK13616	591	lipoprotein LpqB; Provisional	96.04
PHA02713	557	hypothetical protein; Provisional	95.97
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.92
KOG4441|consensus	571		95.82
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	95.79
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	95.78
COG3391	381	Uncharacterized conserved protein [Function unknow	95.77
KOG2079|consensus	1206		95.68
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	95.67
KOG4441|consensus	571		95.66
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.58
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	95.41
KOG1897|consensus	1096		95.35
PHA02713	557	hypothetical protein; Provisional	95.12
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	95.1
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	94.92
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	94.8
KOG4460|consensus	741		94.62
KOG1916|consensus	1283		94.51
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	93.86
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	93.78
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.6
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.5
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	93.36
KOG4499|consensus	310		93.33
COG3391	381	Uncharacterized conserved protein [Function unknow	92.89
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	92.78
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	92.39
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	92.37
KOG1897|consensus	1096		92.35
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	92.18
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	91.55
KOG4499|consensus	310		91.47
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	91.34
PLN00033	398	photosystem II stability/assembly factor; Provisio	91.27
PHA03098	534	kelch-like protein; Provisional	90.9
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	90.89
PHA02790	480	Kelch-like protein; Provisional	90.86
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	90.64
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	90.63
PHA03098	534	kelch-like protein; Provisional	89.88
KOG2247|consensus	615		89.55
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	89.54
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	88.25
KOG2377|consensus	657		88.19
KOG1916|consensus	1283		88.02
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	87.49
COG5167	776	VID27 Protein involved in vacuole import and degra	87.34
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	87.1
PRK13684	334	Ycf48-like protein; Provisional	87.07
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	86.91
KOG3630|consensus	1405		86.81
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	86.61
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	86.6
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	85.88
KOG3616|consensus	1636		85.43
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	84.66
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	84.21
KOG2377|consensus	657		84.07
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	83.96
COG5167	776	VID27 Protein involved in vacuole import and degra	83.93
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	83.39
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	83.13
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	82.93
PLN00033	398	photosystem II stability/assembly factor; Provisio	82.4
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	82.4
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	82.37
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	82.29
PRK10115	686	protease 2; Provisional	81.84
KOG2247|consensus	615		81.03
KOG3630|consensus	1405		81.01
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	80.68

>KOG0271|consensus

Probab=100.00  E-value=1.7e-97  Score=660.89  Aligned_cols=468  Identities=63%  Similarity=1.107  Sum_probs=425.6

Q ss_pred             cccccccEEEEEEC---CCCCcccCeEEecCCCCHHHHHHHHHHhhcC-CCCccEEEEeccccccchhhccCCCCCCCcc
Q psy2671           6 DKITTKRILTRFKS---DDGEVAGDLLDLPLNVNTEHLSLIVNSLLQQ-DEGTPYLFYVNETEITKTLADVLPLDTLNTE   81 (573)
Q Consensus         6 ~~~~~~~~~~~~~~---~~~~~~~~~~~vp~~~~~~~l~~~~~~l~~~-~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~   81 (573)
                      +.++...|...|..   ++|+..+.++.||..+.+.+|.+++|.||.+ ++++||.||+++.+|..+|++.+.....++|
T Consensus         7 ~~~~~~~i~~~l~~~~~d~g~~~g~~~~vp~~is~~qL~~l~n~ll~~s~dp~pysf~v~~~ei~~~l~~tL~~~~v~te   86 (480)
T KOG0271|consen    7 DPAELVTIPLLLVSVATDTGENEGSALLVPGDISTLQLELLCNQLLGNSDDPVPYSFFVTEIEILDSLETTLEKQNVSTE   86 (480)
T ss_pred             cccccccchhhcccccCCcccccCCceeccccCCHHHHHHHHHHHhhcccCCcceEEEecchHHHHHHHHHHhhcccchh
Confidence            33445677777765   7788999999999999999999999999987 8899999999999999999999998899999


Q ss_pred             eEEEEEeeeceeeeeeecccccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccc
Q psy2671          82 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE  161 (573)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~  161 (573)
                      +++.+.|++|++|.++|+.+|..+++                                                      
T Consensus        87 ~~l~lvyqpqavfrvrpvtrCssS~~------------------------------------------------------  112 (480)
T KOG0271|consen   87 DVLTLVYQPQAVFRVRPVTRCSSSIA------------------------------------------------------  112 (480)
T ss_pred             heeeEEeccchhhcccccceeccccC------------------------------------------------------
Confidence            99999999999988888777765554                                                      


Q ss_pred             cccccccccCCCCCCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee
Q psy2671         162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP  241 (573)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~  241 (573)
                                                                 ||.++|.|++|+|+|+.||+|++|.++|+||+.+.++
T Consensus       113 -------------------------------------------GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp  149 (480)
T KOG0271|consen  113 -------------------------------------------GHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETP  149 (480)
T ss_pred             -------------------------------------------CCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCc
Confidence                                                       4555555555666666666666677777777777888


Q ss_pred             eEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         242 LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       242 ~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                      .+++++|..+|.|++|+|||+.||+|+.||+|++||+.+|.++...+++|+.+|++++|.|.++.+.+++|++++.||+|
T Consensus       150 ~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~v  229 (480)
T KOG0271|consen  150 LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSV  229 (480)
T ss_pred             ceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       322 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      +|||+..+.++..+.+|+.+|+|++|.+++.|++||.|++|++|+..+|.++++++||.+||+.++.+.++.++..+..-
T Consensus       230 rIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~  309 (480)
T KOG0271|consen  230 RIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDH  309 (480)
T ss_pred             EEEEccCceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999988877665


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                      ......  ...+....++.+|.+.++ .++.|++|++|+++.+|++...++++.++.+|+..|+.+.||||+++||++|.
T Consensus       310 t~~~~~--~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSF  387 (480)
T KOG0271|consen  310 TGRKPK--SFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASF  387 (480)
T ss_pred             ccccCC--ChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeec
Confidence            444333  223556667777877654 46899999999999999999888899999999999999999999999999999


Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEE
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA  560 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~  560 (573)
                      |..|++||.++|+.+.+|+||...|+.++||.|.++|++||.|.++++|++++.++...|+||.++|++++|+|||+.++
T Consensus       388 DkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~  467 (480)
T KOG0271|consen  388 DKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVA  467 (480)
T ss_pred             ccceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeCCCcEEEcc
Q psy2671         561 SGGKDKVLRLWQ  572 (573)
Q Consensus       561 s~~~d~~i~iw~  572 (573)
                      +||.|+.+++|.
T Consensus       468 sggkdkv~~lw~  479 (480)
T KOG0271|consen  468 SGGKDKVLRLWR  479 (480)
T ss_pred             cCCCceEEEeec
Confidence            999999999996

>KOG0313|consensus

Probab=100.00  E-value=1.5e-62  Score=437.73  Aligned_cols=395  Identities=30%  Similarity=0.524  Sum_probs=320.7

Q ss_pred             ccccEEEEEECCCCC--cccCeEEecCCCCHHHHHHHHHHhhcCC----CCccEEEEeccccccchhhccCCCCCCCcce
Q psy2671           9 TTKRILTRFKSDDGE--VAGDLLDLPLNVNTEHLSLIVNSLLQQD----EGTPYLFYVNETEITKTLADVLPLDTLNTEE   82 (573)
Q Consensus         9 ~~~~~~~~~~~~~~~--~~~~~~~vp~~~~~~~l~~~~~~l~~~~----~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~   82 (573)
                      .++||+|||.++++.  ++++||.||.+.+|++|++++|+||+.+    +++||||+|.+++||++|++++...+++.|+
T Consensus         4 ~~~qvqvrF~Tk~e~~aVpD~p~~iP~~~~r~gLs~ivN~ll~se~~~~K~~pFDFLi~gelLRtsL~e~l~~kgiSsE~   83 (423)
T KOG0313|consen    4 NSGQVQVRFFTKNEDYAVPDVPFAIPTSVERYGLSNIVNKLLKSENGFWKPVPFDFLIKGELLRTSLDEHLEEKGISSEE   83 (423)
T ss_pred             CcceEEEEEEecccccCCCCcceeccCcceEccHHHHHHHHHhccCCcCCCCcceEEEcceeeeccHHHHHHHcCcChhh
Confidence            358999999998875  7899999999999999999999999887    7899999999999999999999999999999


Q ss_pred             EEEEEeeeceeeeeeecccccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeeccccc
Q psy2671          83 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEI  162 (573)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~  162 (573)
                      +++|||......    +.. ...+ -|+|||++|...  +++|+||+|||++||||....                    
T Consensus        84 ~leIEYv~~~~a----P~p-l~~~-~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk--------------------  135 (423)
T KOG0313|consen   84 ILEIEYVEAITA----PKP-LQCF-LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK--------------------  135 (423)
T ss_pred             eeEEEEEEecCC----CCc-cccc-cchhhhhhhccc--CceEEEeecCCeeEEEecCCc--------------------
Confidence            999999764321    111 1111 399999999987  789999999999999998642                    


Q ss_pred             ccccccccCCCCCCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-C--CCeEEEEeCCCeEEEEECCCC
Q psy2671         163 TKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-N--GRSLASGSGDTTVRFWDVTTQ  239 (573)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~--g~~las~s~d~~i~iwd~~~~  239 (573)
                                                          +..+..||+++|.++++.- +  ...++++|.|+++++|.++.+
T Consensus       136 ------------------------------------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~  179 (423)
T KOG0313|consen  136 ------------------------------------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG  179 (423)
T ss_pred             ------------------------------------eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence                                                2244569999999888743 3  336999999999999998876


Q ss_pred             ee----eEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE
Q psy2671         240 TP----LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS  315 (573)
Q Consensus       240 ~~----~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~  315 (573)
                      ..    +..++||++.|.+|+..++|.++++|++|.+|++|+.++...  ..+..-..       .+   ....++    
T Consensus       180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~--~~~E~~s~-------~r---rk~~~~----  243 (423)
T KOG0313|consen  180 ENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEE--DELESSSN-------RR---RKKQKR----  243 (423)
T ss_pred             hhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCcc--ccccccch-------hh---hhhhhh----
Confidence            43    345679999999999999999999999999999999432211  00000000       00   000000    


Q ss_pred             eCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeE
Q psy2671         316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR  395 (573)
Q Consensus       316 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  395 (573)
                        ++     ...++.++..+.+|..+|.++.|++...++++|+|++|+.||+.++....++.                  
T Consensus       244 --~~-----~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~------------------  298 (423)
T KOG0313|consen  244 --EK-----EGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLT------------------  298 (423)
T ss_pred             --hh-----cccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeee------------------
Confidence              00     11234567789999999999999998899999999999999998765432221                  


Q ss_pred             EEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE
Q psy2671         396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII  475 (573)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l  475 (573)
                                                                                     .++.++|+.++|..++|
T Consensus       299 ---------------------------------------------------------------~~ksl~~i~~~~~~~Ll  315 (423)
T KOG0313|consen  299 ---------------------------------------------------------------TNKSLNCISYSPLSKLL  315 (423)
T ss_pred             ---------------------------------------------------------------cCcceeEeeccccccee
Confidence                                                                           13458899999999999


Q ss_pred             EEeeCCCcEEEEeCCCCe---EEEeecCCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCccc-ccccccCcCCCEEEE
Q psy2671         476 ASASFDKSIKLWDGRIGK---FITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKK-IEQDLPGHGDEVYAV  550 (573)
Q Consensus       476 as~s~dg~i~lwd~~~~~---~~~~~~~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~-~~~~l~~h~~~v~~~  550 (573)
                      |+|+.|..+++||++++.   ...+|.+|...|.++.|+|... +|++++.|+++++||+++.+ .++.+.+|.++|.++
T Consensus       316 ~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~v  395 (423)
T KOG0313|consen  316 ASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSV  395 (423)
T ss_pred             eecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEE
Confidence            999999999999999863   3467889999999999999665 58899999999999999887 789999999999999


Q ss_pred             EEccCCCEEEEeeCCCcEEEcc
Q psy2671         551 DWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       551 ~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+. +..|+|||.|++|+|++
T Consensus       396 dW~~-~~~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  396 DWNE-GGLIVSGGADNKLRIFK  416 (423)
T ss_pred             eccC-CceEEeccCcceEEEec
Confidence            9995 57899999999999985

>KOG0271|consensus

Probab=100.00  E-value=1.6e-60  Score=424.71  Aligned_cols=319  Identities=36%  Similarity=0.685  Sum_probs=289.1

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      +|.|++|+|+|..|||||+|.|||+||+.+++|++.                                            
T Consensus       117 ~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t--------------------------------------------  152 (480)
T KOG0271|consen  117 AVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFT--------------------------------------------  152 (480)
T ss_pred             cEEEEEecCCCceEEecCCCceEEeeccCCCCccee--------------------------------------------
Confidence            589999999999999999999999999999988754                                            


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCCCcEEEEEEcC-----CCCeEE
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSP-----DSKQLV  265 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~~~V~~v~~s~-----dg~~l~  265 (573)
                                 ..||...|.|++|+|||+.||+|+.||+|++||.++++++ ..+.||+.+|++++|-|     ..++||
T Consensus       153 -----------~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~la  221 (480)
T KOG0271|consen  153 -----------CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLA  221 (480)
T ss_pred             -----------ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCcccee
Confidence                       3489999999999999999999999999999999998776 46899999999999965     678999


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEE
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI  345 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  345 (573)
                      +++.||.++|||+..+.++ ..+.||+..|++++|..      ..++.+++.|++|++|+...+.+.+.+.+|...|+.+
T Consensus       222 s~skDg~vrIWd~~~~~~~-~~lsgHT~~VTCvrwGG------~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~l  294 (480)
T KOG0271|consen  222 SSSKDGSVRIWDTKLGTCV-RTLSGHTASVTCVRWGG------EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHL  294 (480)
T ss_pred             cccCCCCEEEEEccCceEE-EEeccCccceEEEEEcC------CceEEecCCCceEEEEEccchhHHHhhcccchheeee
Confidence            9999999999999988776 46789999999999964      2579999999999999999999999999999999998


Q ss_pred             EEC-------------CC------------------------cEEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEE
Q psy2671         346 RWG-------------GS------------------------GLIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLA  387 (573)
Q Consensus       346 ~~~-------------~~------------------------~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~  387 (573)
                      +.+             +.                        ..+++|++|.++.+|+.... +.+..+.||...|+.+.
T Consensus       295 alsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~  374 (480)
T KOG0271|consen  295 ALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVS  374 (480)
T ss_pred             eccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEE
Confidence            876             11                        14899999999999987544 46667889999998888


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEE
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE  467 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~  467 (573)
                      ++                                     |++.++|+++.|+.|++|+.++++ .+..+.||-.+|+.++
T Consensus       375 fS-------------------------------------Pd~r~IASaSFDkSVkLW~g~tGk-~lasfRGHv~~VYqva  416 (480)
T KOG0271|consen  375 FS-------------------------------------PDGRYIASASFDKSVKLWDGRTGK-FLASFRGHVAAVYQVA  416 (480)
T ss_pred             EC-------------------------------------CCccEEEEeecccceeeeeCCCcc-hhhhhhhccceeEEEE
Confidence            77                                     568999999999999999988765 5788999999999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      |+.|.++|++||.|.++++||+++.+....|.||...|+++.|+|||+.+++|+.|..+++|.
T Consensus       417 wsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  417 WSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             eccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence            999999999999999999999999999999999999999999999999999999999999994

>KOG0318|consensus

Probab=100.00  E-value=2.3e-49  Score=367.33  Aligned_cols=461  Identities=24%  Similarity=0.417  Sum_probs=340.2

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCe-------eeeeccccc------ccccccccC
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY-------LFYVNETEI------TKTLADVLP  171 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~-------~~~~~~~~~------~~~~~~~~~  171 (573)
                      .+.+|...++..+|||.|.|+|||...|+|||||......+.+.+-.+.       .+......+      .+.+...+.
T Consensus        54 iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~  133 (603)
T KOG0318|consen   54 IYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFL  133 (603)
T ss_pred             eeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEE
Confidence            4567999999999999999999999999999999876544333221100       000000000      111221111


Q ss_pred             CCC------C--CccceEEEEEeceeeEEEee-------------ccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCe
Q psy2671         172 LDT------L--NTEEVVDIVYQKQAVFQVRP-------------VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT  230 (573)
Q Consensus       172 ~~~------~--~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~  230 (573)
                      .+.      +  +...+....+++...|++..             ..+-..++..|...|.|++|+|||.++|+++.||.
T Consensus       134 ~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgk  213 (603)
T KOG0318|consen  134 WDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGK  213 (603)
T ss_pred             ecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCcc
Confidence            111      0  11112223333333333322             12234566789999999999999999999999999


Q ss_pred             EEEEECCCCeeeEEec---CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc--ccEEEEEeccccc
Q psy2671         231 VRFWDVTTQTPLFKCE---GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK--QWITALSWEPFHL  305 (573)
Q Consensus       231 i~iwd~~~~~~~~~~~---~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~~~~~~  305 (573)
                      |.+||-.+++.+..+.   +|++.|.+++|+||+++++|++.|.++++||+.+.+.+.....+.+  +..-++-|.    
T Consensus       214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq----  289 (603)
T KOG0318|consen  214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ----  289 (603)
T ss_pred             EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe----
Confidence            9999999999998887   8999999999999999999999999999999999877655444433  333344453    


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEec-cCCccee
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL-EGHAHWV  383 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~-~~~~~~v  383 (573)
                         ...|++.+-+|+|.+++.......+++.+|...|+++..++++ .|++|+.||.|.-|+...|...+.. ++|...|
T Consensus       290 ---kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI  366 (603)
T KOG0318|consen  290 ---KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQI  366 (603)
T ss_pred             ---CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceE
Confidence               3579999999999999999888999999999999999999887 7999999999999999988766544 7888888


Q ss_pred             eEEEecc-Cce--------eEEEEcCCCcee--------eCCCCchhh--------------------------hhhhhh
Q psy2671         384 NTLALST-DYL--------MRVEATSTGGFK--------YDPANPEES--------------------------SKHALA  420 (573)
Q Consensus       384 ~~~~~s~-~~~--------~~~~~~~~~~~~--------~~~~~~~~~--------------------------~~~~~~  420 (573)
                      ..++.+. +..        ++......+++.        .+|......                          ......
T Consensus       367 ~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~  446 (603)
T KOG0318|consen  367 KGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYES  446 (603)
T ss_pred             EEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeecccccc
Confidence            8887765 222        222221111110        011100000                          000001


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCc-cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-ee
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-TL  498 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~~  498 (573)
                      ...+.+|++..++.|++|+.+++|.+.... ........|..+|++|+||||+.+||+|...+.+.+||..+.+... ..
T Consensus       447 s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w  526 (603)
T KOG0318|consen  447 SAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRW  526 (603)
T ss_pred             ceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceeccee
Confidence            123457999999999999999999988644 3445667899999999999999999999999999999998876532 23


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      -.|...|.+++|||+..++||||.|..|.||+++... .+....+|...|+.+.|-.+ ..|+|.|.|..||+|+.
T Consensus       527 ~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wlde-~tvvSsG~Da~iK~W~v  601 (603)
T KOG0318|consen  527 AFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWLDE-STVVSSGQDANIKVWNV  601 (603)
T ss_pred             eeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEecC-ceEEeccCcceeEEecc
Confidence            3599999999999999999999999999999997643 35556789989999999865 68999999999999973

>KOG0319|consensus

Probab=100.00  E-value=6.8e-49  Score=378.35  Aligned_cols=456  Identities=24%  Similarity=0.406  Sum_probs=353.5

Q ss_pred             ccccccCCC-ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeec-ccccccccccccCCCCCCc
Q psy2671         100 TRCTSSMPG-HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVN-ETEITKTLADVLPLDTLNT  177 (573)
Q Consensus       100 ~~~~~~~~g-H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  177 (573)
                      .++++.+.. |+.||.-++|+|.+..+||||.|+.|+|||+..+.+.+.+.|++...+.. +.+-...  ..+ ....++
T Consensus        94 gk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~--~lL-~sg~~D  170 (775)
T KOG0319|consen   94 GKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNR--WLL-ASGATD  170 (775)
T ss_pred             chHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccch--hhe-eecCCC
Confidence            466677777 99999999999999999999999999999999999999888876443321 1000000  000 011111


Q ss_pred             cceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEE
Q psy2671         178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW  257 (573)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~  257 (573)
                      ..+.        ++.+.....|.+.+.+|...|++++|++|+..++++|.|..+.|||+.+.+....+.-. ..+.++.+
T Consensus       171 ~~v~--------vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~y-e~~E~vv~  241 (775)
T KOG0319|consen  171 GTVR--------VWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLY-ESLESVVR  241 (775)
T ss_pred             ceEE--------EEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechh-hheeeEEE
Confidence            1111        12222234478889999999999999999999999999999999999776655444322 34677777


Q ss_pred             cCC-----CCeEEEEeeCCeEEEEECCCCceeccc------------------------------------------ccC
Q psy2671         258 SPD-----SKQLVSGCKNGVIHAWDSSTGKQIGQP------------------------------------------MRG  290 (573)
Q Consensus       258 s~d-----g~~l~sgs~dg~i~vwd~~~~~~~~~~------------------------------------------~~~  290 (573)
                      -++     |.++++++.+|.+++||.++++.....                                          +.|
T Consensus       242 l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG  321 (775)
T KOG0319|consen  242 LREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVG  321 (775)
T ss_pred             echhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcC
Confidence            776     679999999999999999877643211                                          112


Q ss_pred             CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCC
Q psy2671         291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD  369 (573)
Q Consensus       291 h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~  369 (573)
                      ..+.|..++|    ..+..+.++.+++.+.+|+|+..+..+. .+.+|+..|.++....+| .++|||.|.++++|.+++
T Consensus       322 ~ndEI~Dm~~----lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~  396 (775)
T KOG0319|consen  322 YNDEILDMKF----LGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNN  396 (775)
T ss_pred             Cchhheeeee----cCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecC
Confidence            2233334433    2234578999999999999998877765 889999999999954555 899999999999998854


Q ss_pred             Ce----eeEeccCCcceeeEEEeccCce-eEEEEcCCCcee-eCCCC--chhh--------hhhhhh---heeeeCCCCc
Q psy2671         370 GV----MCRTLEGHAHWVNTLALSTDYL-MRVEATSTGGFK-YDPAN--PEES--------SKHALA---KYQAQCPEGE  430 (573)
Q Consensus       370 ~~----~~~~~~~~~~~v~~~~~s~~~~-~~~~~~~~~~~~-~~~~~--~~~~--------~~~~~~---~~~~~~~~~~  430 (573)
                      +.    ++....||.+.|..++.+..+. +.+....+..++ |....  +...        ...+..   ...+.+|+.+
T Consensus       397 ~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk  476 (775)
T KOG0319|consen  397 NCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK  476 (775)
T ss_pred             CcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCc
Confidence            43    3345679999999999876543 444445555544 33222  1100        111111   1234579999


Q ss_pred             EEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW  510 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~  510 (573)
                      ++|+||+|++.++|+++ .......+.||...|.||.|+|..+++|++|.|++|+||.+.++.++++|.||...|..+.|
T Consensus       477 LiAT~SqDktaKiW~le-~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F  555 (775)
T KOG0319|consen  477 LIATGSQDKTAKIWDLE-QLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASF  555 (775)
T ss_pred             eEEecccccceeeeccc-CceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeee
Confidence            99999999999999998 45567889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      -.+|+.|+|++.||.+|+|++++++++.++.+|+++|+++.-+|++.+++|||.||.|.+|.+
T Consensus       556 ~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD  618 (775)
T KOG0319|consen  556 IRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKD  618 (775)
T ss_pred             eeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeec
Confidence            999999999999999999999999999999999999999999999999999999999999963

>KOG0272|consensus

Probab=100.00  E-value=2.1e-50  Score=364.91  Aligned_cols=286  Identities=30%  Similarity=0.546  Sum_probs=254.0

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      +-.|-+.+|..+.||+|+..|||||.+|.++||+..+...+                                       
T Consensus       170 SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~---------------------------------------  210 (459)
T KOG0272|consen  170 SQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLL---------------------------------------  210 (459)
T ss_pred             hhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCccee---------------------------------------
Confidence            33478899999999999999999999999999998765322                                       


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                      .++.||.+.|.++.|+|.  +..+|||+.||++++|++.+..++..+.||...|..++|+|+|+
T Consensus       211 ----------------~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~  274 (459)
T KOG0272|consen  211 ----------------QTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGK  274 (459)
T ss_pred             ----------------EEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCc
Confidence                            346799999999999997  66899999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +|+|+|.|.+-++||++++..+. ...||...|.+++|.|     +|..++|||.|..-||||+++++++..        
T Consensus       275 ~L~TasfD~tWRlWD~~tk~ElL-~QEGHs~~v~~iaf~~-----DGSL~~tGGlD~~~RvWDlRtgr~im~--------  340 (459)
T KOG0272|consen  275 FLGTASFDSTWRLWDLETKSELL-LQEGHSKGVFSIAFQP-----DGSLAATGGLDSLGRVWDLRTGRCIMF--------  340 (459)
T ss_pred             eeeecccccchhhcccccchhhH-hhcccccccceeEecC-----CCceeeccCccchhheeecccCcEEEE--------
Confidence            99999999999999999987653 4679999999988865     556666666666666666655544433        


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                                                                                                      
T Consensus       341 --------------------------------------------------------------------------------  340 (459)
T KOG0272|consen  341 --------------------------------------------------------------------------------  340 (459)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                       +.+|.++|.+|+|+|+|..|||||.|++++|||++..+.+.++.+|.
T Consensus       341 ---------------------------------L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~  387 (459)
T KOG0272|consen  341 ---------------------------------LAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHS  387 (459)
T ss_pred             ---------------------------------ecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccccc
Confidence                                             33456678899999999999999999999999999999999999999


Q ss_pred             ceEEEEEECC-CCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .-|+.|.|+| .|.+|+|+|.|++++||...+..+++.|.||.++|.+++.++|+++++|+|.|+++|+|.
T Consensus       388 nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  388 NLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             chhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            9999999999 788999999999999999999999999999999999999999999999999999999996

>KOG0319|consensus

Probab=100.00  E-value=6.1e-48  Score=371.82  Aligned_cols=409  Identities=24%  Similarity=0.455  Sum_probs=327.8

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      +.-.+.+++++.+||+++|++++..+.+|+|.+.+++.+                                         
T Consensus        59 ~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~i-----------------------------------------   97 (775)
T KOG0319|consen   59 NEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLI-----------------------------------------   97 (775)
T ss_pred             ccchhhhheeeecCCccEEEEeeccceEEEEEcccchHh-----------------------------------------
Confidence            346778999999999999999999999999999887543                                         


Q ss_pred             ceeeEEEeeccccccCCCC-CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe--
Q psy2671         187 KQAVFQVRPVTRCTSSMPG-HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ--  263 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~g-h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~--  263 (573)
                                    ..+.. |+.||.-++|+|.|..+|+|+.|+.+++||+..+...+.++||.+.|.++.|.|+-.+  
T Consensus        98 --------------rswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~l  163 (775)
T KOG0319|consen   98 --------------RSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWL  163 (775)
T ss_pred             --------------HhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhh
Confidence                          22333 9999999999999999999999999999999999999999999999999999997664  


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc--------------------------------------
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL--------------------------------------  305 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~--------------------------------------  305 (573)
                      |++|..|+++++||.++.......+..|...|+++.+.+...                                      
T Consensus       164 L~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~  243 (775)
T KOG0319|consen  164 LASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLR  243 (775)
T ss_pred             eeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEec
Confidence            899999999999999876654456778888888888766421                                      


Q ss_pred             ---CCCCCEEEEEeCCCcEEEEECCCCeEE-------------------------------------------EEecCCC
Q psy2671         306 ---NHQCRRFASSGKDGAIRIWDVILSQCV-------------------------------------------RVLTSHT  339 (573)
Q Consensus       306 ---~~~~~~l~s~~~dg~v~iwd~~~~~~~-------------------------------------------~~~~~h~  339 (573)
                         ...+.++.++|.+|.+++||...+++.                                           +.+.|..
T Consensus       244 ~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~n  323 (775)
T KOG0319|consen  244 EELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYN  323 (775)
T ss_pred             hhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCc
Confidence               011346777777788888876443211                                           1122345


Q ss_pred             ccEEEEEECC--CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc-eeeCCCCchhhhh
Q psy2671         340 RSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG-FKYDPANPEESSK  416 (573)
Q Consensus       340 ~~v~~~~~~~--~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~  416 (573)
                      ..|..++|-+  +..++.+++...+|+|+..+.. +..+.||...|.++.....+.+.+....+.. +.|...+... ..
T Consensus       324 dEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~-c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~-~~  401 (775)
T KOG0319|consen  324 DEILDMKFLGPEESHLAVATNSPELRLYTLPTSY-CQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS-KS  401 (775)
T ss_pred             hhheeeeecCCccceEEEEeCCCceEEEecCCCc-eEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcc-hh
Confidence            5677777754  3579999999999999876554 4488999999999996666645555555444 4454422111 11


Q ss_pred             hhhh----------heeeeCCCCcEEEEEeCCCeEEEEcCCCCcc--ce------eeeccccccEEEEEECCCCCEEEEe
Q psy2671         417 HALA----------KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK--SL------ARMTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       417 ~~~~----------~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~--~~------~~~~~h~~~v~~v~~sp~g~~las~  478 (573)
                      ...+          ...........++++|.|+++++|++...+.  ..      .....|.+.|+||+++|+.++||+|
T Consensus       402 ~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~  481 (775)
T KOG0319|consen  402 LCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATG  481 (775)
T ss_pred             hhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEec
Confidence            1111          0111123346899999999999999876221  11      1345799999999999999999999


Q ss_pred             eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE
Q psy2671         479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK  558 (573)
Q Consensus       479 s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~  558 (573)
                      |.|++.+||++.......+|.||...|+++.|+|..+.+||+|.|++||||.+.++.+++++.||...|..+.|-.+|++
T Consensus       482 SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~q  561 (775)
T KOG0319|consen  482 SQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQ  561 (775)
T ss_pred             ccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCcEEEcc
Q psy2671         559 VASGGKDKVLRLWQ  572 (573)
Q Consensus       559 l~s~~~d~~i~iw~  572 (573)
                      |+|++.||.+++|+
T Consensus       562 liS~~adGliKlWn  575 (775)
T KOG0319|consen  562 LISAGADGLIKLWN  575 (775)
T ss_pred             EEeccCCCcEEEEe
Confidence            99999999999997

>KOG0286|consensus

Probab=100.00  E-value=8.8e-45  Score=313.49  Aligned_cols=293  Identities=29%  Similarity=0.486  Sum_probs=265.9

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.+.|.++.|++|.++|+++|.||.+.|||.-+....+.+.-...+|..+||+|.|+++|+|+.|+...||++.+
T Consensus        49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~  128 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLST  128 (343)
T ss_pred             EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccc
Confidence            56889999999999999999999999999999999988888888888899999999999999999999999999998763


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      ..                                  .+|.++        ..+.+.+|++-+.|..|.+++.|+|+|.|.
T Consensus       129 ~d----------------------------------~~g~~~--------v~r~l~gHtgylScC~f~dD~~ilT~SGD~  166 (343)
T KOG0286|consen  129 RD----------------------------------AEGNVR--------VSRELAGHTGYLSCCRFLDDNHILTGSGDM  166 (343)
T ss_pred             cc----------------------------------ccccce--------eeeeecCccceeEEEEEcCCCceEecCCCc
Confidence            21                                  112221        245678999999999999999999999999


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      +..+||+++|+.+..+.||...|.++.++|.                                    +++.+++|+-|++
T Consensus       167 TCalWDie~g~~~~~f~GH~gDV~slsl~p~------------------------------------~~ntFvSg~cD~~  210 (343)
T KOG0286|consen  167 TCALWDIETGQQTQVFHGHTGDVMSLSLSPS------------------------------------DGNTFVSGGCDKS  210 (343)
T ss_pred             eEEEEEcccceEEEEecCCcccEEEEecCCC------------------------------------CCCeEEecccccc
Confidence            9999999999999999999999999887742                                    4789999999999


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC--CcceEEEEEECCCCCEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG--HVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~--h~~~v~~v~~s~dg~~la  518 (573)
                      .++||++.+ .....+.+|...|++|+|.|+|.-+++|+.|+++++||++..+.+..+..  -..+|++++||..|++|.
T Consensus       211 aklWD~R~~-~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLf  289 (343)
T KOG0286|consen  211 AKLWDVRSG-QCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLF  289 (343)
T ss_pred             eeeeeccCc-ceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEE
Confidence            999999886 56788999999999999999999999999999999999999888877753  345799999999999999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|..|.++.+||.-.++.+..|.||.++|.++..+|||.-++|||.|.++|||.
T Consensus       290 agy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  290 AGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             eeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            999999999999999999999999999999999999999999999999999995

>KOG0286|consensus

Probab=100.00  E-value=3.2e-44  Score=310.01  Aligned_cols=289  Identities=26%  Similarity=0.468  Sum_probs=252.3

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      .++|+||.+.|.++.|++|+++|+|+|.||.+.|||.-+.+..+-                                   
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ha-----------------------------------   92 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHA-----------------------------------   92 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeE-----------------------------------
Confidence            368999999999999999999999999999999999877654321                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC------eeeEEecCCCCcEEEEE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ------TPLFKCEGHKHWVLCIA  256 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~------~~~~~~~~h~~~V~~v~  256 (573)
                                          ++-....|..++|+|.|+++|+|+.|+...||++.+.      .....+.+|++.+.|+.
T Consensus        93 --------------------ipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~  152 (343)
T KOG0286|consen   93 --------------------IPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCR  152 (343)
T ss_pred             --------------------EecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEE
Confidence                                1223568999999999999999999999999999865      23456889999999999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  336 (573)
                      |-+|+ +|+|+|.|.+..+||+++|+++ +.+.||..-|.++...|.    +++.|++|+-|+..++||++.+.+++.+.
T Consensus       153 f~dD~-~ilT~SGD~TCalWDie~g~~~-~~f~GH~gDV~slsl~p~----~~ntFvSg~cD~~aklWD~R~~~c~qtF~  226 (343)
T KOG0286|consen  153 FLDDN-HILTGSGDMTCALWDIETGQQT-QVFHGHTGDVMSLSLSPS----DGNTFVSGGCDKSAKLWDVRSGQCVQTFE  226 (343)
T ss_pred             EcCCC-ceEecCCCceEEEEEcccceEE-EEecCCcccEEEEecCCC----CCCeEEecccccceeeeeccCcceeEeec
Confidence            98755 7999999999999999999876 567899999999998774    67899999999999999999999999999


Q ss_pred             CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       337 ~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      +|...|++++|.|+| .+++||.|++.|+||++....+..                                        
T Consensus       227 ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~----------------------------------------  266 (343)
T KOG0286|consen  227 GHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAV----------------------------------------  266 (343)
T ss_pred             ccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEee----------------------------------------
Confidence            999999999999888 588899999999999875433221                                        


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                                                  |..+          .-...|++|+||..|++|.+|..|.++.+||.-.++.+
T Consensus       267 ----------------------------ys~~----------~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~v  308 (343)
T KOG0286|consen  267 ----------------------------YSHD----------SIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERV  308 (343)
T ss_pred             ----------------------------eccC----------cccCCceeEEEcccccEEEeeecCCceeEeeccccceE
Confidence                                        1100          11245899999999999999999999999999999999


Q ss_pred             EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       496 ~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ..|.||..+|+++..+|||.-|+|||.|.++|||.
T Consensus       309 g~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  309 GVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             EEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            99999999999999999999999999999999994

>KOG0279|consensus

Probab=100.00  E-value=1e-43  Score=305.14  Aligned_cols=293  Identities=26%  Similarity=0.505  Sum_probs=234.4

Q ss_pred             ccCCCccccEEEEEEcCC-CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~-~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      .+|+||+++|++++..+. ...+++++.|.++.+|++......                                     
T Consensus         9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~-------------------------------------   51 (315)
T KOG0279|consen    9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK-------------------------------------   51 (315)
T ss_pred             eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccc-------------------------------------
Confidence            468899999999999887 468899999999999998643110                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                   .+.....+.||...|..+..++||++.++++.|+++++||+.++++...+.||...|++++|+||.+
T Consensus        52 -------------~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~  118 (315)
T KOG0279|consen   52 -------------YGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNR  118 (315)
T ss_pred             -------------cCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCc
Confidence                         0112245779999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +|+||+.|.+|++|++..+......-.++++||++++|.|..   ....++++|+|++|++||+                
T Consensus       119 qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~---~~p~Ivs~s~DktvKvWnl----------------  179 (315)
T KOG0279|consen  119 QIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE---SNPIIVSASWDKTVKVWNL----------------  179 (315)
T ss_pred             eeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCC---CCcEEEEccCCceEEEEcc----------------
Confidence            999999999999999876544322223348899999988842   1234444444444444443                


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                                               ++.+                                                   
T Consensus       180 -------------------------~~~~---------------------------------------------------  183 (315)
T KOG0279|consen  180 -------------------------RNCQ---------------------------------------------------  183 (315)
T ss_pred             -------------------------CCcc---------------------------------------------------
Confidence                                     2211                                                   


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                   ....+.||+..++.+++||||.+.++|+.||.+.+||++.++.+..+. |.
T Consensus       184 -----------------------------l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~  233 (315)
T KOG0279|consen  184 -----------------------------LRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AF  233 (315)
T ss_pred             -----------------------------hhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CC
Confidence                                         122345678889999999999999999999999999999999988875 66


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc----Cc-----CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP----GH-----GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~----~h-----~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..|.+++|+|+.-+|+.+. +..|+|||+.+++++..+.    +.     .-...+++||+||+.|++|-.|+.|++|.
T Consensus       234 ~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~q  311 (315)
T KOG0279|consen  234 DIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQ  311 (315)
T ss_pred             CeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEE
Confidence            8999999999987776654 5569999999988765543    22     22356889999999999999999999996

>KOG0291|consensus

Probab=100.00  E-value=1.4e-41  Score=328.27  Aligned_cols=373  Identities=24%  Similarity=0.414  Sum_probs=310.3

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      .-+.+.||.+.|.++.|+.|.++|++||.|.++|||++...+-+.                                   
T Consensus       137 l~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~-----------------------------------  181 (893)
T KOG0291|consen  137 LHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLF-----------------------------------  181 (893)
T ss_pred             EeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccc-----------------------------------
Confidence            446778999999999999999999999999999999987543211                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-----------------------
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-----------------------  238 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-----------------------  238 (573)
                                        ...+.||.+.|-++-|..+...+.+.+.||.+.+|....                       
T Consensus       182 ------------------~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~  243 (893)
T KOG0291|consen  182 ------------------TYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDED  243 (893)
T ss_pred             ------------------eEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCccccccccccccccccccccc
Confidence                              134679999999999999999999999999999997651                       


Q ss_pred             Cee-----------eEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCC
Q psy2671         239 QTP-----------LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH  307 (573)
Q Consensus       239 ~~~-----------~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  307 (573)
                      ++.           .+-+......|+|.+|++....|++|-..|...++++..-..+.. +.-....|..+.|+     .
T Consensus       244 ~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~-LSis~~~I~t~~~N-----~  317 (893)
T KOG0291|consen  244 GEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHS-LSISDQKILTVSFN-----S  317 (893)
T ss_pred             chhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEE-eecccceeeEEEec-----c
Confidence            111           111122236799999999999999999999999999987655432 22233456666654     3


Q ss_pred             CCCEEEEEeC-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeE
Q psy2671         308 QCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNT  385 (573)
Q Consensus       308 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~  385 (573)
                      .|+.++.|+. -|.+-+|+..+...+...++|...+++++++++| .+++|+.||.|++||...|.+..++..|+..|..
T Consensus       318 tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~  397 (893)
T KOG0291|consen  318 TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTA  397 (893)
T ss_pred             cCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEE
Confidence            6778887754 4899999999999999999999999999999998 6999999999999999999999999999999998


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEE
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLIN  464 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~  464 (573)
                      +.++.                                     .|..+++.+-||+|+.||+...+. .+++. ...-...
T Consensus       398 v~f~~-------------------------------------~g~~llssSLDGtVRAwDlkRYrN-fRTft~P~p~Qfs  439 (893)
T KOG0291|consen  398 VQFTA-------------------------------------RGNVLLSSSLDGTVRAWDLKRYRN-FRTFTSPEPIQFS  439 (893)
T ss_pred             EEEEe-------------------------------------cCCEEEEeecCCeEEeeeecccce-eeeecCCCceeee
Confidence            88763                                     478899999999999999876544 23332 2334578


Q ss_pred             EEEECCCCCEEEEeeCCC-cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-ccccccC
Q psy2671         465 CVEFSPDGRIIASASFDK-SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IEQDLPG  542 (573)
Q Consensus       465 ~v~~sp~g~~las~s~dg-~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~~~l~~  542 (573)
                      ||+..|.|.++..|+.|. .|.+|+.++|+++..+.||.++|.+++|+|++..||++|.|++||+||+-... .+..++ 
T Consensus       440 cvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-  518 (893)
T KOG0291|consen  440 CVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE-  518 (893)
T ss_pred             EEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe-
Confidence            999999999999998886 59999999999999999999999999999999999999999999999996543 233443 


Q ss_pred             cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       543 h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +...++.++|+|||+.|+++.-||.|-+|+
T Consensus       519 i~sdvl~vsfrPdG~elaVaTldgqItf~d  548 (893)
T KOG0291|consen  519 IRSDVLAVSFRPDGKELAVATLDGQITFFD  548 (893)
T ss_pred             eccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence            567899999999999999999999999997

>KOG0272|consensus

Probab=100.00  E-value=2e-44  Score=326.14  Aligned_cols=248  Identities=31%  Similarity=0.591  Sum_probs=211.7

Q ss_pred             cccccCCCccccEEEEEEcCC--CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCcc
Q psy2671         101 RCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE  178 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~--~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (573)
                      ....+|.||++.|.++.|+|.  +..||||+.||+|++|++++.+++                                 
T Consensus       208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l---------------------------------  254 (459)
T KOG0272|consen  208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL---------------------------------  254 (459)
T ss_pred             ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch---------------------------------
Confidence            345678999999999999997  568999999999999999876554                                 


Q ss_pred             ceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671         179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s  258 (573)
                                            ..+.||...|..++|+|+|++|+|+|.|.+-++||+.++..+...+||...|.+++|.
T Consensus       255 ----------------------~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~  312 (459)
T KOG0272|consen  255 ----------------------QDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQ  312 (459)
T ss_pred             ----------------------hhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEec
Confidence                                  3467899999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH  338 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h  338 (573)
                      |||..++||+.|..-+|||+++|+++. .+.||...|.++.|.|     +|-.+||||.|++++|||++           
T Consensus       313 ~DGSL~~tGGlD~~~RvWDlRtgr~im-~L~gH~k~I~~V~fsP-----NGy~lATgs~Dnt~kVWDLR-----------  375 (459)
T KOG0272|consen  313 PDGSLAATGGLDSLGRVWDLRTGRCIM-FLAGHIKEILSVAFSP-----NGYHLATGSSDNTCKVWDLR-----------  375 (459)
T ss_pred             CCCceeeccCccchhheeecccCcEEE-EecccccceeeEeECC-----CceEEeecCCCCcEEEeeec-----------
Confidence            999999999999999999999999873 4566766666666554     22334444444444444432           


Q ss_pred             CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       339 ~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                                                                                                      
T Consensus       376 --------------------------------------------------------------------------------  375 (459)
T KOG0272|consen  376 --------------------------------------------------------------------------------  375 (459)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                                   .. ..+..+.+|...|+.|.|+| .|.+|+|+|+|++++||..+++.++++
T Consensus       376 -----------------------------~r-~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ks  425 (459)
T KOG0272|consen  376 -----------------------------MR-SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKS  425 (459)
T ss_pred             -----------------------------cc-ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchh
Confidence                                         21 12445667888899999999 789999999999999999999999999


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      +.||.+.|.+++.++|+++++|++.|+++|+|.
T Consensus       426 LaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  426 LAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             hcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            999999999999999999999999999999995

>KOG0273|consensus

Probab=100.00  E-value=4.2e-42  Score=315.17  Aligned_cols=348  Identities=26%  Similarity=0.470  Sum_probs=286.4

Q ss_pred             cCCCccccEEEEEEcCCCC-eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~-~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .++ |+.+|.+.+|+|-.. .+|+|+.|.+.|+|++....-....              ...+..               
T Consensus       174 vl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~--------------q~~lrh---------------  223 (524)
T KOG0273|consen  174 VLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGST--------------QLVLRH---------------  223 (524)
T ss_pred             ecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccch--------------hhhhhh---------------
Confidence            344 999999999999876 9999999999999998641100000              000000               


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                 ....|.... ..+..|++++|+-+|..||+|+.||.++||+. ++..+..+..|+++|.++.|+.+|.|
T Consensus       224 -----------~~~~~~~s~-~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~y  290 (524)
T KOG0273|consen  224 -----------CIREGGKSV-PSNKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTY  290 (524)
T ss_pred             -----------hhhhhcccC-CccCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCE
Confidence                       000011111 12467999999999999999999999999995 45667788899999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      |++++.|+++.+||..+|... +.+.-|...-..+.|..      ...|++++.||.|+++.+...+++.++.+|.+.|.
T Consensus       291 ilS~~vD~ttilwd~~~g~~~-q~f~~~s~~~lDVdW~~------~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~  363 (524)
T KOG0273|consen  291 ILSGGVDGTTILWDAHTGTVK-QQFEFHSAPALDVDWQS------NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVN  363 (524)
T ss_pred             EEeccCCccEEEEeccCceEE-EeeeeccCCccceEEec------CceEeecCCCceEEEEEecCCCcceeeecccCceE
Confidence            999999999999999888654 33445555545566643      34799999999999999999999999999999999


Q ss_pred             EEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         344 CIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       344 ~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ++.|.+.+ .|+++|.|+++++|.+..+.....+.+|...|..+.++|.....                           
T Consensus       364 alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~---------------------------  416 (524)
T KOG0273|consen  364 ALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVT---------------------------  416 (524)
T ss_pred             EEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCcc---------------------------
Confidence            99999887 68999999999999999999999999999999998888764211                           


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                       .....+..+++++.|++|++||...+. ++..+..|+.+|++|+|||+|+++|+|+.||.|.+|+.++++.++...+. 
T Consensus       417 -~n~~~~~~l~sas~dstV~lwdv~~gv-~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-  493 (524)
T KOG0273|consen  417 -SNPNMNLMLASASFDSTVKLWDVESGV-PIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-  493 (524)
T ss_pred             -CCCcCCceEEEeecCCeEEEEEccCCc-eeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCC-
Confidence             011346789999999999999988754 57778899999999999999999999999999999999999999988765 


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +.|+.++|+.+|.+|..+-.|+.+++-|++
T Consensus       494 ~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  494 GGIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            569999999999999999999999998875

>KOG0273|consensus

Probab=100.00  E-value=6.7e-42  Score=313.85  Aligned_cols=322  Identities=30%  Similarity=0.541  Sum_probs=284.2

Q ss_pred             CCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCe----e---eEEe---cC----CCCcEEEEEEcCCCCeEEEEe
Q psy2671         204 PGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQT----P---LFKC---EG----HKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~----~---~~~~---~~----h~~~V~~v~~s~dg~~l~sgs  268 (573)
                      .+|..+|.+++|+|-.. .+++|+.|.+.++|++....    .   +..+   .+    .+..|++++|+.+|..||+|+
T Consensus       175 l~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~  254 (524)
T KOG0273|consen  175 LRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGS  254 (524)
T ss_pred             ccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEee
Confidence            34999999999999766 89999999999999987411    0   0000   11    235799999999999999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~  348 (573)
                      .||.+++|+...+. + ..+.-|+++|.++.|+.     .+.++++++.|+++.+||..++.....+..|..+-..+.|-
T Consensus       255 ~~G~~riw~~~G~l-~-~tl~~HkgPI~slKWnk-----~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~  327 (524)
T KOG0273|consen  255 EDGEARIWNKDGNL-I-STLGQHKGPIFSLKWNK-----KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ  327 (524)
T ss_pred             cCcEEEEEecCchh-h-hhhhccCCceEEEEEcC-----CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe
Confidence            99999999986543 2 46778999999999975     67899999999999999999999999999999888889999


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      .+..+++++.|+.|+++.+....+.+++.||...|+.+.+.                                     |.
T Consensus       328 ~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n-------------------------------------~t  370 (524)
T KOG0273|consen  328 SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWN-------------------------------------PT  370 (524)
T ss_pred             cCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEEC-------------------------------------CC
Confidence            99999999999999999999999999999999999888765                                     56


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC---------CEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG---------RIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g---------~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      +.+|+++++|++++||..... .....+.+|.+.|..+.|+|.|         ..+++++.|++|++||+..+.++.+|.
T Consensus       371 g~LLaS~SdD~TlkiWs~~~~-~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~  449 (524)
T KOG0273|consen  371 GSLLASCSDDGTLKIWSMGQS-NSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM  449 (524)
T ss_pred             CceEEEecCCCeeEeeecCCC-cchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec
Confidence            899999999999999996543 4567788999999999999975         379999999999999999999999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .|..+|++++|||+|+++|+|+.||.|.+|+++++++++.+.+. +.|..+.|+.+|..|..+-.|+.+++-
T Consensus       450 kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvl  520 (524)
T KOG0273|consen  450 KHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVL  520 (524)
T ss_pred             cCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEE
Confidence            99999999999999999999999999999999999999988764 569999999999999999999987763

>KOG0295|consensus

Probab=100.00  E-value=7e-43  Score=310.42  Aligned_cols=305  Identities=30%  Similarity=0.559  Sum_probs=268.9

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...+.||..+|+.+-|+|+...+++++.|+++++||.++|+.                                     
T Consensus       100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~-------------------------------------  142 (406)
T KOG0295|consen  100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGEL-------------------------------------  142 (406)
T ss_pred             chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhh-------------------------------------
Confidence            3456789999999999999999999999999999999998754                                     


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-CeeeEEecCCCCcEEEEEEcCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h~~~V~~v~~s~d  260 (573)
                                        ...+.||++.|.+++|+..|++||+++.|-.+++||..+ .+++..+.+|...|.+++|-|-
T Consensus       143 ------------------e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~  204 (406)
T KOG0295|consen  143 ------------------ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPL  204 (406)
T ss_pred             ------------------hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEec
Confidence                              245789999999999999999999999999999999876 4566777899999999999999


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      |.+|+|++.|.+|+.|+..+|-++ ..+.+|..||..+..     +.+|..+++++.|.++++|-..++++...+..|..
T Consensus       205 gd~ilS~srD~tik~We~~tg~cv-~t~~~h~ewvr~v~v-----~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh  278 (406)
T KOG0295|consen  205 GDHILSCSRDNTIKAWECDTGYCV-KTFPGHSEWVRMVRV-----NQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH  278 (406)
T ss_pred             CCeeeecccccceeEEecccceeE-EeccCchHhEEEEEe-----cCCeeEEEecCCCceEEEEEeccchhhhhhhcccc
Confidence            999999999999999999999887 568899999988764     45889999999999999999999999999999999


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      +|.|++|.+... ++...+.        ++                                                  
T Consensus       279 ~vEci~wap~~~-~~~i~~a--------t~--------------------------------------------------  299 (406)
T KOG0295|consen  279 PVECIAWAPESS-YPSISEA--------TG--------------------------------------------------  299 (406)
T ss_pred             ceEEEEeccccc-Ccchhhc--------cC--------------------------------------------------
Confidence            999999976421 1000000        00                                                  


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                          ....+.++++++.|++|++||+.++ .++..+.+|...|..++|+|.|++|+++..|+++++||+++++++.++..
T Consensus       300 ----~~~~~~~l~s~SrDktIk~wdv~tg-~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a  374 (406)
T KOG0295|consen  300 ----STNGGQVLGSGSRDKTIKIWDVSTG-MCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA  374 (406)
T ss_pred             ----CCCCccEEEeecccceEEEEeccCC-eEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC
Confidence                0013578999999999999999886 46788999999999999999999999999999999999999999999999


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      |...+++++|..+-.+++||+-|.++++|.-
T Consensus       375 h~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  375 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             CcceeEEEecCCCCceEEeccccceeeeeec
Confidence            9999999999999999999999999999964

>KOG0306|consensus

Probab=100.00  E-value=1.7e-41  Score=327.47  Aligned_cols=398  Identities=25%  Similarity=0.409  Sum_probs=305.7

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -...|+|+.-+|+..+||.|=.||.|+||+.+++..+                                           
T Consensus        64 ~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~-------------------------------------------  100 (888)
T KOG0306|consen   64 KKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEIL-------------------------------------------  100 (888)
T ss_pred             ccceEEEeeccCCcceEEEEecCceEEeeccCCCcee-------------------------------------------
Confidence            3468999999999999999999999999999876432                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                  .++.||...|+++.|...|..|||||.|+.|.+||+-....++.++||+..|+..-|..+.+.|++.|
T Consensus       101 ------------~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~s  168 (888)
T KOG0306|consen  101 ------------ITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVS  168 (888)
T ss_pred             ------------eeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEec
Confidence                        24679999999999999999999999999999999999999999999999999999998888999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC-------------------------------
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-------------------------------  317 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-------------------------------  317 (573)
                      .|++|++||+++..+. ...-.|+..+.++++.+       +++++++.                               
T Consensus       169 KDs~iK~WdL~tqhCf-~Thvd~r~Eiw~l~~~~-------~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~  240 (888)
T KOG0306|consen  169 KDSMIKFWDLETQHCF-ETHVDHRGEIWALVLDE-------KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFI  240 (888)
T ss_pred             cCceEEEEecccceee-eEEecccceEEEEEEec-------ceEEEEecCCceEEEEeecccccccccccceeeccceee
Confidence            9999999999876543 22334444444444322       12223333                               


Q ss_pred             --------------------------------------------------------------------------------
Q psy2671         318 --------------------------------------------------------------------------------  317 (573)
Q Consensus       318 --------------------------------------------------------------------------------  317 (573)
                                                                                                      
T Consensus       241 rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~  320 (888)
T KOG0306|consen  241 RQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTS  320 (888)
T ss_pred             eccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheech
Confidence                                                                                            


Q ss_pred             ------------------------------------------------------------------------CCcEEEEE
Q psy2671         318 ------------------------------------------------------------------------DGAIRIWD  325 (573)
Q Consensus       318 ------------------------------------------------------------------------dg~v~iwd  325 (573)
                                                                                              .+.+++|+
T Consensus       321 ~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn  400 (888)
T KOG0306|consen  321 AKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWN  400 (888)
T ss_pred             hheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEE
Confidence                                                                                    33444444


Q ss_pred             CCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         326 VILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       326 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      ..+.++++++...  -+.+..|-| +..+++|...|.+.+||+....++.+.+.|...+.+++.++|....+....+...
T Consensus       401 ~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktV  478 (888)
T KOG0306|consen  401 RDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTV  478 (888)
T ss_pred             ccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEE
Confidence            4444444444322  233333322 2234444444444444444444555567788888999998887766665555544


Q ss_pred             ee-CC----CCc-hhhhhhh-----------hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEE
Q psy2671         405 KY-DP----ANP-EESSKHA-----------LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE  467 (573)
Q Consensus       405 ~~-~~----~~~-~~~~~~~-----------~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~  467 (573)
                      ++ +.    ..+ .......           -.-....+|+|++|+.+--|.++++|-+.+.+ ....+.||.-+|.|+.
T Consensus       479 kfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlK-FflsLYGHkLPV~smD  557 (888)
T KOG0306|consen  479 KFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLK-FFLSLYGHKLPVLSMD  557 (888)
T ss_pred             EEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEeccee-eeeeecccccceeEEe
Confidence            32 11    000 0000000           01122457999999999999999999887643 4567899999999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV  547 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v  547 (573)
                      .|||++++++||.|.+|++|-+.-|.+-+.+-+|...|.++.|-|+..++.++|.|+.|+-||-...+.++.+.+|...|
T Consensus       558 IS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev  637 (888)
T KOG0306|consen  558 ISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEV  637 (888)
T ss_pred             ccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchhee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         548 YAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       548 ~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++.+|+|.+++|+|.|..|++|.
T Consensus       638 ~cLav~~~G~~vvs~shD~sIRlwE  662 (888)
T KOG0306|consen  638 WCLAVSPNGSFVVSSSHDKSIRLWE  662 (888)
T ss_pred             eeeEEcCCCCeEEeccCCceeEeee
Confidence            9999999999999999999999996

>KOG0296|consensus

Probab=100.00  E-value=2.2e-41  Score=301.10  Aligned_cols=339  Identities=22%  Similarity=0.373  Sum_probs=279.2

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .+|..|+++|.+++.+|+.+++||||.|...-||++.++..+                                      
T Consensus        58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~--------------------------------------   99 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFA--------------------------------------   99 (399)
T ss_pred             eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcce--------------------------------------
Confidence            467789999999999999999999999999999999887532                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                       ..+.||.++|+++.||-||.+||||.++|.|+||...++.....+......+.-+.|+|-+..
T Consensus       100 -----------------~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~i  162 (399)
T KOG0296|consen  100 -----------------GELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHI  162 (399)
T ss_pred             -----------------eEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccE
Confidence                             235699999999999999999999999999999999999888877766677888999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-CccE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-TRSV  342 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~~v  342 (573)
                      |+.|+.||.+.+|.+.++. ..+.+.||...+++-.|.|     +|++++++..||+|++|++.++++...+... ....
T Consensus       163 llAG~~DGsvWmw~ip~~~-~~kv~~Gh~~~ct~G~f~p-----dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~  236 (399)
T KOG0296|consen  163 LLAGSTDGSVWMWQIPSQA-LCKVMSGHNSPCTCGEFIP-----DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLEL  236 (399)
T ss_pred             EEeecCCCcEEEEECCCcc-eeeEecCCCCCcccccccC-----CCceEEEEecCceEEEEecCCCceeEEecccccCcC
Confidence            9999999999999998863 3467899999999888776     6899999999999999999999998877632 3345


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .++.++..+ .+++|+.++.+.+-+..+|+.+....+....   +.                    +..   ........
T Consensus       237 ~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~---l~--------------------~~~---e~~~esve  290 (399)
T KOG0296|consen  237 PCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPE---LK--------------------PSQ---EELDESVE  290 (399)
T ss_pred             CccccccccceeEeccCCccEEEEccccceEEEecCCCCcc---cc--------------------ccc---hhhhhhhh
Confidence            677776655 6888999999998888887766544421000   00                    000   00000001


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      ....|..-.+.|+|+.||+|.|||+...  .++....|+..|..+.|-+ ..+|++++.||.|+.||.|+|++..++.||
T Consensus       291 ~~~~ss~lpL~A~G~vdG~i~iyD~a~~--~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH  367 (399)
T KOG0296|consen  291 SIPSSSKLPLAACGSVDGTIAIYDLAAS--TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGH  367 (399)
T ss_pred             hcccccccchhhcccccceEEEEecccc--hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecC
Confidence            1112233457899999999999998764  3566778999999999999 789999999999999999999999999999


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ...|++++.+|+.++++|+|.|++.+||+..
T Consensus       368 ~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  368 QMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             chheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            9999999999999999999999999999864

>KOG0295|consensus

Probab=100.00  E-value=4.9e-42  Score=305.08  Aligned_cols=303  Identities=27%  Similarity=0.457  Sum_probs=271.1

Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ...+.||..+|+.+-|+|+-..+++++.|++|++||..+++....++||++.|..++|+..|++|++++.|-.+++||..
T Consensus       101 ~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~  180 (406)
T KOG0295|consen  101 VQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFD  180 (406)
T ss_pred             hhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHH
Confidence            35577999999999999999999999999999999999999988999999999999999999999999999999999987


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ  358 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~  358 (573)
                      +...-.+.+.+|+..|.++.|-|.     +.++++++.|.+|+.|++.++-++.++.+|...|..++...+| .+++++.
T Consensus       181 ~~~~c~ks~~gh~h~vS~V~f~P~-----gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~  255 (406)
T KOG0295|consen  181 TFFRCIKSLIGHEHGVSSVFFLPL-----GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSN  255 (406)
T ss_pred             HHHHHHHHhcCcccceeeEEEEec-----CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCC
Confidence            744334567899999999999884     5799999999999999999999999999999999999999998 5788999


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      |.++++|-..++.+...+.+|.+.|..+++.+....                                |+ -.-+++   
T Consensus       256 dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~--------------------------------~~-i~~at~---  299 (406)
T KOG0295|consen  256 DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSY--------------------------------PS-ISEATG---  299 (406)
T ss_pred             CceEEEEEeccchhhhhhhccccceEEEEecccccC--------------------------------cc-hhhccC---
Confidence            999999999999888889999999988887654110                                00 000000   


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la  518 (573)
                                          ..         ..++++.+++.|++|++||+.++.++.++.+|..+|..++|+|.|+||+
T Consensus       300 --------------------~~---------~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~  350 (406)
T KOG0295|consen  300 --------------------ST---------NGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL  350 (406)
T ss_pred             --------------------CC---------CCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE
Confidence                                00         1467999999999999999999999999999999999999999999999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++..|+++++||++++.+...++.|..-|++++|..+..+++||+-|.++++|.
T Consensus       351 ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  351 SCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             EEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence            999999999999999999999999999999999999999999999999999996

>KOG0315|consensus

Probab=100.00  E-value=2.5e-40  Score=279.43  Aligned_cols=288  Identities=24%  Similarity=0.410  Sum_probs=244.4

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce-ecccccCCcccEEEEE
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ-IGQPMRGHKQWITALS  299 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~  299 (573)
                      +|+++|.|.+||+|...+|.+..+++...+.|+.+...||++.||+|+.- .|++||+++++. ....+.+|...|+++.
T Consensus        12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVg   90 (311)
T KOG0315|consen   12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVG   90 (311)
T ss_pred             EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEE
Confidence            78999999999999999999999998888899999999999999887764 699999999876 2345779999999998


Q ss_pred             ecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-
Q psy2671         300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-  377 (573)
Q Consensus       300 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-  377 (573)
                      |..     +++.+.+||+||++||||++...+-+.+ .|..+|+++...++. .|++|.++|.|++||+.+......+- 
T Consensus        91 F~~-----dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP  164 (311)
T KOG0315|consen   91 FQC-----DGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP  164 (311)
T ss_pred             Eee-----cCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC
Confidence            754     7899999999999999999986555544 466999999998875 79999999999999998765433322 


Q ss_pred             CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC-----ccc
Q psy2671         378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE-----KKS  452 (573)
Q Consensus       378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~-----~~~  452 (573)
                      .....|.++.+                                     .|+|.+++.+...|.+++|++-..     ..+
T Consensus       165 e~~~~i~sl~v-------------------------------------~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P  207 (311)
T KOG0315|consen  165 EDDTSIQSLTV-------------------------------------MPDGSMLAAANNKGNCYVWRLLNHQTASELEP  207 (311)
T ss_pred             CCCcceeeEEE-------------------------------------cCCCcEEEEecCCccEEEEEccCCCccccceE
Confidence            11223333332                                     377999999999999999997643     234


Q ss_pred             eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      +..+..|+..+..+.+|||+++||++|.|.+++||+.... +.-..+.+|..+++.++||.||+||++|+.|+.+++|++
T Consensus       208 ~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~  287 (311)
T KOG0315|consen  208 VHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDL  287 (311)
T ss_pred             hhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeeccc
Confidence            5667889999999999999999999999999999998887 666788999999999999999999999999999999999


Q ss_pred             CcccccccccCcCCCEEEEEE
Q psy2671         532 KTKKIEQDLPGHGDEVYAVDW  552 (573)
Q Consensus       532 ~~~~~~~~l~~h~~~v~~~~~  552 (573)
                      ..++.++...||.....+++.
T Consensus       288 ~~~k~v~qy~gh~K~~vc~~l  308 (311)
T KOG0315|consen  288 SAGKEVRQYQGHHKAAVCVAL  308 (311)
T ss_pred             ccCceeeecCCcccccEEEEe
Confidence            999999999999887777654

>KOG0645|consensus

Probab=100.00  E-value=6.9e-40  Score=280.38  Aligned_cols=289  Identities=30%  Similarity=0.590  Sum_probs=232.6

Q ss_pred             ccCCCccccEEEEEEcCC-CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~-~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..++||.+.|+.++++|- |..|||||.|+.||||+..++... .                                   
T Consensus         8 ~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~-~-----------------------------------   51 (312)
T KOG0645|consen    8 QKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSW-T-----------------------------------   51 (312)
T ss_pred             EeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcE-E-----------------------------------
Confidence            357899999999999998 899999999999999998753211 1                                   


Q ss_pred             EEEeceeeEEEeeccccccC-CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSS-MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~  259 (573)
                                      |... -.+|...|.+++|+|.|++||+||-|.++.||.-..+  +.+..++||...|.|++||+
T Consensus        52 ----------------ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~  115 (312)
T KOG0645|consen   52 ----------------CKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSA  115 (312)
T ss_pred             ----------------EEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcC
Confidence                            1111 2379999999999999999999999999999986543  57788999999999999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      +|++||++++|..|-+|.+..+..                                             ..+..++..|+
T Consensus       116 sG~~LATCSRDKSVWiWe~deddE---------------------------------------------fec~aVL~~Ht  150 (312)
T KOG0645|consen  116 SGNYLATCSRDKSVWIWEIDEDDE---------------------------------------------FECIAVLQEHT  150 (312)
T ss_pred             CCCEEEEeeCCCeEEEEEecCCCc---------------------------------------------EEEEeeecccc
Confidence            999999999999999998753321                                             12455677899


Q ss_pred             ccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         340 RSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       340 ~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ..|..+.|+|. .+|+++|+|.+|++|+...+                                                
T Consensus       151 qDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~d------------------------------------------------  182 (312)
T KOG0645|consen  151 QDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDD------------------------------------------------  182 (312)
T ss_pred             ccccEEEEcCCcceeEEeccCCeEEEEeecCC------------------------------------------------
Confidence            88999999875 47888888888888864311                                                


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                                                   ..-.+...+.+|...|.+++|+|.|..|++++.|++++||-..+.    .-
T Consensus       183 -----------------------------ddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~----~~  229 (312)
T KOG0645|consen  183 -----------------------------DDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD----LS  229 (312)
T ss_pred             -----------------------------CCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC----cc
Confidence                                         011234556788888999999999999999999999999975422    11


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc------cc-cccccCcCCCEEEEEEccC-CCEEEEeeCCCcEEE
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK------KI-EQDLPGHGDEVYAVDWAPD-GEKVASGGKDKVLRL  570 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~------~~-~~~l~~h~~~v~~~~~s~d-~~~l~s~~~d~~i~i  570 (573)
                      ..|...++.++|.  ...||+++.|+.|++|.-...      +. ...-..|...|+++.|.|. +..|+++|.||.|++
T Consensus       230 ~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~  307 (312)
T KOG0645|consen  230 GMHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNF  307 (312)
T ss_pred             hhcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEE
Confidence            2377889999999  458999999999999976542      11 1233568889999999995 678999999999999


Q ss_pred             cc
Q psy2671         571 WQ  572 (573)
Q Consensus       571 w~  572 (573)
                      |.
T Consensus       308 W~  309 (312)
T KOG0645|consen  308 WE  309 (312)
T ss_pred             EE
Confidence            96

>KOG0291|consensus

Probab=100.00  E-value=9.2e-39  Score=308.85  Aligned_cols=410  Identities=20%  Similarity=0.357  Sum_probs=323.5

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeec----CCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE----GTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      +..-|.+++.||+|.++++....|.+.+-++.....++...    .....+.+++.-+...           .+.++.++
T Consensus        54 ~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f~fk~~v~~i~fSPng~~fav~-----------~gn~lqiw  122 (893)
T KOG0291|consen   54 TRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRFNFKRGVGAIKFSPNGKFFAVG-----------CGNLLQIW  122 (893)
T ss_pred             cCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEEeecCccceEEECCCCcEEEEE-----------ecceeEEE
Confidence            66789999999999999999999988888887766553321    1111122222221111           12222222


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcCCCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~dg~  262 (573)
                      -.+...-...+.-....+..||.+.|.++.|+.|.++|++||.|.+++||++...+.  .+.+.+|+..|.+.-|..+..
T Consensus       123 ~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~  202 (893)
T KOG0291|consen  123 HAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSL  202 (893)
T ss_pred             ecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcc
Confidence            222211100011122346779999999999999999999999999999999887665  567889999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCC-----------------------ce-----ecc-----cccCCcccEEEEEecccccCCCC
Q psy2671         263 QLVSGCKNGVIHAWDSSTG-----------------------KQ-----IGQ-----PMRGHKQWITALSWEPFHLNHQC  309 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~-----------------------~~-----~~~-----~~~~h~~~v~~~~~~~~~~~~~~  309 (573)
                      .+++-+.||.+.+|.....                       ..     ...     .+......|++.+|++     ..
T Consensus       203 ~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~-----~t  277 (893)
T KOG0291|consen  203 DLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHK-----GT  277 (893)
T ss_pred             eEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccC-----Cc
Confidence            9999999999999976511                       00     000     0011123455666554     34


Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEE
Q psy2671         310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLA  387 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~  387 (573)
                      +.++++=..|...+|++....+++.+.--...|..+.|+..| .|+.| +.-|.+-+|+......+...+||...+.+++
T Consensus       278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~  357 (893)
T KOG0291|consen  278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLA  357 (893)
T ss_pred             eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEE
Confidence            678999999999999999999999988888899999998655 45544 4568999999999888889999999988888


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEE
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE  467 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~  467 (573)
                      .+                                     |+|+++|+|++||.|++||..++ -++.++..|+..|+.+.
T Consensus       358 YS-------------------------------------pDgq~iaTG~eDgKVKvWn~~Sg-fC~vTFteHts~Vt~v~  399 (893)
T KOG0291|consen  358 YS-------------------------------------PDGQLIATGAEDGKVKVWNTQSG-FCFVTFTEHTSGVTAVQ  399 (893)
T ss_pred             EC-------------------------------------CCCcEEEeccCCCcEEEEeccCc-eEEEEeccCCCceEEEE
Confidence            76                                     56899999999999999998764 46788999999999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-ceEEEEEECCCCCEEEEEeCCCc-EEEEeCCcccccccccCcCC
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-QAVYMVAWSSDSRLLVSGSADST-LKVWNMKTKKIEQDLPGHGD  545 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-~~v~~v~~s~dg~~las~s~D~~-v~vwd~~~~~~~~~l~~h~~  545 (573)
                      |+..|+.++++|.||+|+.||+..++..+++.... ....|++..|.|.++.+|+.|.. |++|++++|+++-.|.||.+
T Consensus       400 f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEg  479 (893)
T KOG0291|consen  400 FTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEG  479 (893)
T ss_pred             EEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCC
Confidence            99999999999999999999999999888887643 34678999999999999998874 99999999999999999999


Q ss_pred             CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         546 EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|.++.|+|++..|+|+|.|++||+|+
T Consensus       480 PVs~l~f~~~~~~LaS~SWDkTVRiW~  506 (893)
T KOG0291|consen  480 PVSGLSFSPDGSLLASGSWDKTVRIWD  506 (893)
T ss_pred             cceeeEEccccCeEEeccccceEEEEE
Confidence            999999999999999999999999997

>KOG0296|consensus

Probab=100.00  E-value=5.8e-40  Score=292.10  Aligned_cols=327  Identities=22%  Similarity=0.370  Sum_probs=264.9

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .+|..|.++|.+++.+|+.+++|||++|..-.+|+..++..+..+.+|+..|.|+.||.||.+||||..+|.|+||+..+
T Consensus        58 ~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~st  137 (399)
T KOG0296|consen   58 VTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVST  137 (399)
T ss_pred             eehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEccc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD  359 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d  359 (573)
                      +....... ..-..+.=+.|+|     .+..|+.|+.||.+.+|.+..+...+.+.+|+.++++-.|.|+| .++++..|
T Consensus       138 g~~~~~~~-~e~~dieWl~WHp-----~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d  211 (399)
T KOG0296|consen  138 GGEQWKLD-QEVEDIEWLKWHP-----RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD  211 (399)
T ss_pred             CceEEEee-cccCceEEEEecc-----cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence            87654322 2334455566666     45789999999999999999988889999999999999999998 69999999


Q ss_pred             CeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      |+|++|+..++.+...+.+..+ +...+.++                                     ..+..++.|+.+
T Consensus       212 gti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~-------------------------------------~~~~~~~~g~~e  254 (399)
T KOG0296|consen  212 GTIIVWNPKTGQPLHKITQAEGLELPCISLN-------------------------------------LAGSTLTKGNSE  254 (399)
T ss_pred             ceEEEEecCCCceeEEecccccCcCCccccc-------------------------------------cccceeEeccCC
Confidence            9999999999987766543211 11111111                                     234455555555


Q ss_pred             CeEEEEcCCCCccc-------eeeeccccccEEEEEECC---CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671         439 FTLFLWNPEKEKKS-------LARMTGHQQLINCVEFSP---DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV  508 (573)
Q Consensus       439 g~i~lwd~~~~~~~-------~~~~~~h~~~v~~v~~sp---~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v  508 (573)
                      +.+++-+-.+++..       .....++...+.||.|.|   .=.+.|+|+.||+|.|||....++...+ .|..+|..+
T Consensus       255 ~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l  333 (399)
T KOG0296|consen  255 GVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKL  333 (399)
T ss_pred             ccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec-cCCCceEEE
Confidence            55555443332211       111123444555665555   5568899999999999998876654444 488899999


Q ss_pred             EECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       509 ~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|-+ ..+|++++.||.|+.||.++|.++..+.||+..|.+++.+|+.+.++|+|.|++.++|+
T Consensus       334 ~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~  396 (399)
T KOG0296|consen  334 KWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFE  396 (399)
T ss_pred             EEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEe
Confidence            9999 78999999999999999999999999999999999999999999999999999999986

>KOG0318|consensus

Probab=100.00  E-value=1.5e-38  Score=295.61  Aligned_cols=370  Identities=23%  Similarity=0.386  Sum_probs=292.3

Q ss_pred             cccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         197 TRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       197 ~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                      +.....+.||...|.++.|-|... +++|||.|++|.+|+-...+-....+.|...|.|+.|+|||.++++++.||.+.+
T Consensus       137 G~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~i  216 (603)
T KOG0318|consen  137 GNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYI  216 (603)
T ss_pred             CCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEE
Confidence            445678899999999999999876 5899999999999996665666677889999999999999999999999999999


Q ss_pred             EECCCCceeccc--ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc---cEEEEEECCC
Q psy2671         276 WDSSTGKQIGQP--MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR---SVTCIRWGGS  350 (573)
Q Consensus       276 wd~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~  350 (573)
                      ||-.+|..+...  -.+|++.|.+++|.|     ++..++|++.|.++||||+.+.++++++..-..   .-..+.|. .
T Consensus       217 yDGktge~vg~l~~~~aHkGsIfalsWsP-----Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq-k  290 (603)
T KOG0318|consen  217 YDGKTGEKVGELEDSDAHKGSIFALSWSP-----DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ-K  290 (603)
T ss_pred             EcCCCccEEEEecCCCCccccEEEEEECC-----CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe-C
Confidence            999999876543  348999999999988     667899999999999999999998888654322   22334455 5


Q ss_pred             cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhh----hhhhhhheeee
Q psy2671         351 GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES----SKHALAKYQAQ  425 (573)
Q Consensus       351 ~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~  425 (573)
                      ..|++.+.+|+|.+++..++...+.+.||...|++++.+++........-++.+. |+.......    ..|........
T Consensus       291 d~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~  370 (603)
T KOG0318|consen  291 DHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMA  370 (603)
T ss_pred             CeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEe
Confidence            6799999999999999999999999999999999999999887666665555543 433322211    11211122223


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCc-----------cc--e-----------------eeecccc--------ccEEEEE
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEK-----------KS--L-----------------ARMTGHQ--------QLINCVE  467 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~-----------~~--~-----------------~~~~~h~--------~~v~~v~  467 (573)
                      ..+...+.+.+.|.++++.++....           ++  +                 ..+..+.        ....+++
T Consensus       371 ~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vA  450 (603)
T KOG0318|consen  371 ASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVA  450 (603)
T ss_pred             ecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEE
Confidence            3344678899999999998653210           00  0                 0111111        2256789


Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc-cccCcC
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ-DLPGHG  544 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~-~l~~h~  544 (573)
                      ++|+++.+|.|+.||.|++|.+..+.+  ...+..|..+|+++++|||+.+||++...+.|.+||+.+.+... ...-|+
T Consensus       451 v~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHt  530 (603)
T KOG0318|consen  451 VSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHT  530 (603)
T ss_pred             EcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeee
Confidence            999999999999999999998876543  23456799999999999999999999999999999998887633 333499


Q ss_pred             CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         545 DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       545 ~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+|.+++|||+.+.+||||-|-.|.||+
T Consensus       531 akI~~~aWsP~n~~vATGSlDt~Viiys  558 (603)
T KOG0318|consen  531 AKINCVAWSPNNKLVATGSLDTNVIIYS  558 (603)
T ss_pred             eeEEEEEeCCCceEEEeccccceEEEEE
Confidence            9999999999999999999999999996

>KOG0285|consensus

Probab=100.00  E-value=8.1e-40  Score=290.04  Aligned_cols=296  Identities=26%  Similarity=0.457  Sum_probs=257.8

Q ss_pred             eeeecccccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCC
Q psy2671          95 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT  174 (573)
Q Consensus        95 ~~~~~~~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (573)
                      +...+.++.+.+.||.+||.||++.|-..+++|||.|++++|||+.+|...                             
T Consensus       136 eWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-----------------------------  186 (460)
T KOG0285|consen  136 EWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-----------------------------  186 (460)
T ss_pred             cccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-----------------------------
Confidence            345556778899999999999999999999999999999999999988543                             


Q ss_pred             CCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEE
Q psy2671         175 LNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC  254 (573)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~  254 (573)
                                                .++.||-..|..+++|+--.||++++.|+.|+.||+...+.+..+.||-..|.|
T Consensus       187 --------------------------ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~  240 (460)
T KOG0285|consen  187 --------------------------LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYC  240 (460)
T ss_pred             --------------------------EeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEE
Confidence                                      356799999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       255 v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      ++..|.-+.|++|++|.++++||+++...+ ..+.||...|..+.+.|..     ..+++|+.|++||+||+..++...+
T Consensus       241 L~lhPTldvl~t~grDst~RvWDiRtr~~V-~~l~GH~~~V~~V~~~~~d-----pqvit~S~D~tvrlWDl~agkt~~t  314 (460)
T KOG0285|consen  241 LDLHPTLDVLVTGGRDSTIRVWDIRTRASV-HVLSGHTNPVASVMCQPTD-----PQVITGSHDSTVRLWDLRAGKTMIT  314 (460)
T ss_pred             EeccccceeEEecCCcceEEEeeecccceE-EEecCCCCcceeEEeecCC-----CceEEecCCceEEEeeeccCceeEe
Confidence            999999999999999999999999987765 4688999999999987743     4589999999999999999999999


Q ss_pred             ecCCCccEEEEEECCCcE-EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         335 LTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                      +..|...+.+++..|.-. +++++. ..|+-|++..|..+..+.+|...++.++.+.|                      
T Consensus       315 lt~hkksvral~lhP~e~~fASas~-dnik~w~~p~g~f~~nlsgh~~iintl~~nsD----------------------  371 (460)
T KOG0285|consen  315 LTHHKKSVRALCLHPKENLFASASP-DNIKQWKLPEGEFLQNLSGHNAIINTLSVNSD----------------------  371 (460)
T ss_pred             eecccceeeEEecCCchhhhhccCC-ccceeccCCccchhhccccccceeeeeeeccC----------------------
Confidence            999999999999998764 555555 46899999999999999999999998887654                      


Q ss_pred             hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee--e--cc---ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR--M--TG---HQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~--~--~~---h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                                      .++++|++.|.+.+||.+++......  .  .|   .+..|.+.+|...|..|++|..|.+|++
T Consensus       372 ----------------~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~  435 (460)
T KOG0285|consen  372 ----------------GVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKM  435 (460)
T ss_pred             ----------------ceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEE
Confidence                            47899999999999998876432211  1  11   2345889999999999999999999999


Q ss_pred             EeCC
Q psy2671         487 WDGR  490 (573)
Q Consensus       487 wd~~  490 (573)
                      |.-.
T Consensus       436 ~keD  439 (460)
T KOG0285|consen  436 YKED  439 (460)
T ss_pred             Eecc
Confidence            9643

>KOG0265|consensus

Probab=100.00  E-value=3.9e-39  Score=279.73  Aligned_cols=285  Identities=26%  Similarity=0.562  Sum_probs=237.3

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC-CCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT-TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~-~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      -.++||.+.|..+.|+|+|..||||+.|..|.+|++. ..+....+++|++.|..+.|.+|++.|++++.|.+++.||++
T Consensus        41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~  120 (338)
T KOG0265|consen   41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAE  120 (338)
T ss_pred             hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecc
Confidence            3578999999999999999999999999999999954 445677889999999999999999999999999999999999


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      +|+++. ..++|...|.++.  |....  -.++.+++.|+++|+||++...+++++.. .-.++++.|...+        
T Consensus       121 tG~~~r-k~k~h~~~vNs~~--p~rrg--~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s--------  186 (338)
T KOG0265|consen  121 TGKRIR-KHKGHTSFVNSLD--PSRRG--PQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTS--------  186 (338)
T ss_pred             cceeee-hhccccceeeecC--ccccC--CeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEecccc--------
Confidence            999874 5789999888876  43222  24678899999999999998887776532 2345666665432        


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                                                                                            ..+.+|+-|+
T Consensus       187 ----------------------------------------------------------------------~qv~sggIdn  196 (338)
T KOG0265|consen  187 ----------------------------------------------------------------------DQVISGGIDN  196 (338)
T ss_pred             ----------------------------------------------------------------------cceeeccccC
Confidence                                                                                  3344555555


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----eEEEeecCCcc----eEEEEEEC
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG----KFITTLRGHVQ----AVYMVAWS  511 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~----~~~~~~~~h~~----~v~~v~~s  511 (573)
                      .|++||++.. ..+..+.||.+.|+.+..+|+|.++.+-+.|.++++||.+..    +++..+.+|..    ....++||
T Consensus       197 ~ikvWd~r~~-d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~csws  275 (338)
T KOG0265|consen  197 DIKVWDLRKN-DGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWS  275 (338)
T ss_pred             ceeeeccccC-cceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeecc
Confidence            5666665443 235667889999999999999999999999999999998753    45777777643    34578999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      |++.++.+|+.|..+++||..+...++.++||.+.|++++|+|....|.+++.|++|++
T Consensus       276 p~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l  334 (338)
T KOG0265|consen  276 PNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL  334 (338)
T ss_pred             CCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence            99999999999999999999999999999999999999999999999999999999986

>KOG0276|consensus

Probab=100.00  E-value=1.5e-38  Score=301.15  Aligned_cols=367  Identities=22%  Similarity=0.353  Sum_probs=290.9

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +++..|++.|.++.|||..++++++=+.|.|.|||.+++..+...+                                  
T Consensus         7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfe----------------------------------   52 (794)
T KOG0276|consen    7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFE----------------------------------   52 (794)
T ss_pred             hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeee----------------------------------
Confidence            3456699999999999999999999999999999999886542211                                  


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                           --.-+|.++.|-+--+++++|+.|..||||+..+++.+..+..|.+.|+|++.+|.-.+
T Consensus        53 ---------------------V~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~  111 (794)
T KOG0276|consen   53 ---------------------VSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPY  111 (794)
T ss_pred             ---------------------ecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCe
Confidence                                 12457888889888889999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      ++|+|.|-+|++||-+.+-...+.+.||+..|..++|+|.    +.+.|++++-|++|++|.+....+..++.+|...|+
T Consensus       112 vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPk----D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN  187 (794)
T KOG0276|consen  112 VLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPK----DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVN  187 (794)
T ss_pred             EEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCC----CccceeeeeccccEEEEEcCCCCCceeeeccccCcc
Confidence            9999999999999999887777889999999999999994    456899999999999999999999999999999999


Q ss_pred             EEEECCCc---EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         344 CIRWGGSG---LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       344 ~~~~~~~~---~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |+.+-+.+   .+++|++|.++++||..+..++.+++||.+-|..+.+++                              
T Consensus       188 ~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp------------------------------  237 (794)
T KOG0276|consen  188 CVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHP------------------------------  237 (794)
T ss_pred             eEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecC------------------------------
Confidence            99996655   899999999999999999999999999999998887764                              


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC---------CC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG---------RI  491 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~---------~~  491 (573)
                             .-..+++|++||++|+|+..+-+.. ..+.-.-+.|.|++-.+.+..++.|...|.|.+==.         .+
T Consensus       238 -------~lpiiisgsEDGTvriWhs~Ty~lE-~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~lgreeP~vsMd~~  309 (794)
T KOG0276|consen  238 -------ELPIIISGSEDGTVRIWNSKTYKLE-KTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKLGREEPAVSMDSN  309 (794)
T ss_pred             -------CCcEEEEecCCccEEEecCcceehh-hhhhcCCceEEEEeecCCCCeEEEeccCCcEEEEccCCCCceeecCC
Confidence                   4568999999999999997654332 122223456899999998888999988887655211         12


Q ss_pred             CeEEEe------------ecCC-------c----------ceE--EEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671         492 GKFITT------------LRGH-------V----------QAV--YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       492 ~~~~~~------------~~~h-------~----------~~v--~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l  540 (573)
                      |+.+..            ....       .          ..+  -.++-||+|++++++ .||.-.||..-..+     
T Consensus       310 gKIiwa~~~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~eiyPq~L~hsPNGrfV~Vc-gdGEyiIyTala~R-----  383 (794)
T KOG0276|consen  310 GKIIWAVHSEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEIYPQTLAHSPNGRFVVVC-GDGEYIIYTALALR-----  383 (794)
T ss_pred             ccEEEEcCceeeeeeceeccCcccccCCccccchhhhccccccchHHhccCCCCcEEEEe-cCccEEEEEeeehh-----
Confidence            222111            0000       0          000  136778999888766 48888888532111     


Q ss_pred             cCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       541 ~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      ..+-+.-....|++|....+.--.++.|++++|
T Consensus       384 nK~fG~~~eFvw~~dsne~avRes~~~vki~kn  416 (794)
T KOG0276|consen  384 NKAFGSGLEFVWAADSNEFAVRESNGNVKIFKN  416 (794)
T ss_pred             hcccccceeEEEcCCCCeEEEEecCCceEEEec
Confidence            112234455677777777777666777776653

>KOG0315|consensus

Probab=100.00  E-value=1.2e-38  Score=269.41  Aligned_cols=289  Identities=25%  Similarity=0.427  Sum_probs=238.0

Q ss_pred             CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671         123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS  202 (573)
Q Consensus       123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (573)
                      -+|||+|+|.|||+|...+|.|..+                                                       
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rT-------------------------------------------------------   35 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRT-------------------------------------------------------   35 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEE-------------------------------------------------------
Confidence            4799999999999999999877533                                                       


Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ++-....|..+...||++.||+|+ ...||+||+.++.  |+.++++|+..|+++.|..||+.+++||.||++++||++.
T Consensus        36 iqh~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~  114 (311)
T KOG0315|consen   36 IQHPDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS  114 (311)
T ss_pred             EecCccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccC
Confidence            222345799999999999999886 5689999999865  6889999999999999999999999999999999999987


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCccEEEEEECCCc-EEEEEeC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRSVTCIRWGGSG-LIYSASQ  358 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~-~l~s~s~  358 (573)
                      ..  .+....|...|..+...|.     -..|+++..+|.|++||+....+...+ ......|.++...++| +++.+..
T Consensus       115 ~~--~qR~~~~~spVn~vvlhpn-----QteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nn  187 (311)
T KOG0315|consen  115 LS--CQRNYQHNSPVNTVVLHPN-----QTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANN  187 (311)
T ss_pred             cc--cchhccCCCCcceEEecCC-----cceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecC
Confidence            33  2445567789999987763     346899999999999999988766554 3455788999999888 5666777


Q ss_pred             CCeEEEEeCCCCe------eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         359 DRTIKVWRASDGV------MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       359 d~~i~vw~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      -|...+|++-.+.      .+..++.|...+....+                                     +|++++|
T Consensus       188 kG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~l-------------------------------------SPd~k~l  230 (311)
T KOG0315|consen  188 KGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLL-------------------------------------SPDVKYL  230 (311)
T ss_pred             CccEEEEEccCCCccccceEhhheecccceEEEEEE-------------------------------------CCCCcEE
Confidence            8999999986532      22233444444433333                                     4779999


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                      |+++.|.++++|+.++..+.-..+.+|+..+...+||.||++|++|+.|+.+++||+..++.+....+|.....|++..
T Consensus       231 at~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  231 ATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             EeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            9999999999999988755556788999999999999999999999999999999999999999999998887777654

>KOG0306|consensus

Probab=100.00  E-value=7.7e-38  Score=302.35  Aligned_cols=358  Identities=26%  Similarity=0.411  Sum_probs=282.2

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ..|+|++-+|+...||.|..||.|+||+..++..+.++.||+..|+++.|+..|.+|+|||.|+.|.+||+-...- ...
T Consensus        66 ~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~G-l~r  144 (888)
T KOG0306|consen   66 AEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEG-LFR  144 (888)
T ss_pred             ceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEecccee-eEE
Confidence            5789999999999999999999999999999999999999999999999999999999999999999999864332 245


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA  367 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~  367 (573)
                      +.||++.|+..-|..     ..+.+++.+.|+.|++||+.+..|..+.-.|...+..+++.+ ..+++++.|+.+++|++
T Consensus       145 L~GHkd~iT~~~F~~-----~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~-~~lvt~~~dse~~v~~L  218 (888)
T KOG0306|consen  145 LRGHKDSITQALFLN-----GDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE-KLLVTAGTDSELKVWEL  218 (888)
T ss_pred             eecchHHHhHHhccC-----CCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec-ceEEEEecCCceEEEEe
Confidence            789999988766532     456899999999999999999999999999999999999987 67889999999999987


Q ss_pred             CC----------------C--------eee--------------------------------------------------
Q psy2671         368 SD----------------G--------VMC--------------------------------------------------  373 (573)
Q Consensus       368 ~~----------------~--------~~~--------------------------------------------------  373 (573)
                      ..                |        ..+                                                  
T Consensus       219 ~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e  298 (888)
T KOG0306|consen  219 AFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEE  298 (888)
T ss_pred             ecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccc
Confidence            10                0        000                                                  


Q ss_pred             --------------------------------------------------------------------EeccCCcceeeE
Q psy2671         374 --------------------------------------------------------------------RTLEGHAHWVNT  385 (573)
Q Consensus       374 --------------------------------------------------------------------~~~~~~~~~v~~  385 (573)
                                                                                          .++.||...|++
T Consensus       299 ~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRs  378 (888)
T KOG0306|consen  299 NEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRS  378 (888)
T ss_pred             cccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeE
Confidence                                                                                011234444444


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCch-------------------------------------------hhhhhh-hhh
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPE-------------------------------------------ESSKHA-LAK  421 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------~~~~~~-~~~  421 (573)
                      ++++.+..............|+.....                                           ....|. ...
T Consensus       379 l~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIW  458 (888)
T KOG0306|consen  379 LCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIW  458 (888)
T ss_pred             EEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhcccccee
Confidence            444444433322211111112111000                                           000000 001


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCC-------Cccce----eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEK-------EKKSL----ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~-------~~~~~----~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                      .....|++..+++|+.|.+|++||..-       .++.+    .+...-.+.|.|+.+||||++||++=.|.+|++|-+.
T Consensus       459 si~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflD  538 (888)
T KOG0306|consen  459 SISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLD  538 (888)
T ss_pred             eeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEec
Confidence            123458899999999999999998531       11111    1122335679999999999999999999999999999


Q ss_pred             CCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       491 ~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      +.+....+.||.-+|.|+..|||+++++|||.|.+|++|-++=|.|.+.+.+|.+.|.++.|-|+...+.++|.|+.|+-
T Consensus       539 tlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKq  618 (888)
T KOG0306|consen  539 TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQ  618 (888)
T ss_pred             ceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc
Q psy2671         571 WQ  572 (573)
Q Consensus       571 w~  572 (573)
                      |+
T Consensus       619 WD  620 (888)
T KOG0306|consen  619 WD  620 (888)
T ss_pred             ec
Confidence            96

>KOG0285|consensus

Probab=100.00  E-value=8.1e-39  Score=283.70  Aligned_cols=287  Identities=27%  Similarity=0.487  Sum_probs=250.0

Q ss_pred             ccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671         198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       198 ~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd  277 (573)
                      +....+.||.+.|.|+++.|.+.++++|++|++|+|||+.+++...++.||...|..+++|+-..||++++.|+.|+.||
T Consensus       142 Kl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwD  221 (460)
T KOG0285|consen  142 KLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWD  221 (460)
T ss_pred             eehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEe
Confidence            44567889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEE
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSA  356 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~  356 (573)
                      ++..+.+. ...||-..|.++...|.     -+.++++|.|.++|+||+++...+.++.+|..+|..+.+.+ +..+++|
T Consensus       222 Le~nkvIR-~YhGHlS~V~~L~lhPT-----ldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~  295 (460)
T KOG0285|consen  222 LEYNKVIR-HYHGHLSGVYCLDLHPT-----LDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITG  295 (460)
T ss_pred             chhhhhHH-HhccccceeEEEecccc-----ceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEe
Confidence            99887664 56799999999997763     46899999999999999999999999999999999988764 4467777


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      |.|++|++||+..|+.                                                                
T Consensus       296 S~D~tvrlWDl~agkt----------------------------------------------------------------  311 (460)
T KOG0285|consen  296 SHDSTVRLWDLRAGKT----------------------------------------------------------------  311 (460)
T ss_pred             cCCceEEEeeeccCce----------------------------------------------------------------
Confidence            7777777777654432                                                                


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL  516 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~  516 (573)
                                      ...+..|...|.+++.+|....+|+++.| .|+-|++..|..+..+.+|...|++++...|| .
T Consensus       312 ----------------~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v  373 (460)
T KOG0285|consen  312 ----------------MITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-V  373 (460)
T ss_pred             ----------------eEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-e
Confidence                            23345577889999999999999999987 49999999999999999999999999998887 6


Q ss_pred             EEEEeCCCcEEEEeCCcccccccc-----cC---cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         517 LVSGSADSTLKVWNMKTKKIEQDL-----PG---HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       517 las~s~D~~v~vwd~~~~~~~~~l-----~~---h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +++|+..|.+.+||.+++-..+.+     +|   -...|++..|...|..|++|..|++|++|+
T Consensus       374 ~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~k  437 (460)
T KOG0285|consen  374 LVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYK  437 (460)
T ss_pred             EEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEe
Confidence            678999999999999988655443     11   134689999999999999999999999996

>KOG0263|consensus

Probab=100.00  E-value=3.3e-39  Score=315.04  Aligned_cols=275  Identities=26%  Similarity=0.503  Sum_probs=238.8

Q ss_pred             EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      +++..-...+.|..|++|+..||.|..|..|++|.+...+..  .+++. .++              ..+-+.+.|-.+.
T Consensus       372 YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~--~lk~~-~~l--------------~~~d~~sad~~~~  434 (707)
T KOG0263|consen  372 YTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLK--KLKDA-SDL--------------SNIDTESADVDVD  434 (707)
T ss_pred             EEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhc--cccch-hhh--------------ccccccccchhhh
Confidence            333333456899999999999999999999999998754321  11111 111              1223344455566


Q ss_pred             EEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       323 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      +-|.......+.+.+|+++|....|+|+. .|+++|.|+++|+|.+.+......++||..+|..+.|+            
T Consensus       435 ~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~------------  502 (707)
T KOG0263|consen  435 MLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFA------------  502 (707)
T ss_pred             hccccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEec------------
Confidence            77777776777899999999999999886 79999999999999999999999999999999888776            


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                                               |.|-++|+++.|++.++|.... ..+++.+.+|...|.|++|+|+..++|+||.|
T Consensus       503 -------------------------P~GyYFatas~D~tArLWs~d~-~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD  556 (707)
T KOG0263|consen  503 -------------------------PRGYYFATASHDQTARLWSTDH-NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSD  556 (707)
T ss_pred             -------------------------CCceEEEecCCCceeeeeeccc-CCchhhhcccccccceEEECCcccccccCCCC
Confidence                                     6688999999999999999766 45678889999999999999999999999999


Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      .+||+||..+|..++.|.||.++|.+++|||+|++||+|+.|+.|++||+.+++.+..+.+|++.|+++.||.||..||+
T Consensus       557 ~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLas  636 (707)
T KOG0263|consen  557 RTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLAS  636 (707)
T ss_pred             ceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEcc
Q psy2671         562 GGKDKVLRLWQ  572 (573)
Q Consensus       562 ~~~d~~i~iw~  572 (573)
                      ||.|..|++|+
T Consensus       637 gg~DnsV~lWD  647 (707)
T KOG0263|consen  637 GGADNSVRLWD  647 (707)
T ss_pred             cCCCCeEEEEE
Confidence            99999999997

>KOG0284|consensus

Probab=100.00  E-value=1.6e-39  Score=293.01  Aligned_cols=279  Identities=29%  Similarity=0.551  Sum_probs=236.3

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      .+|..|.|.|+|+.|++|+..|.+.+|+..+..--..+..|...|+++.|+++|.+++||+.+|.|++|+..-... ...
T Consensus        97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV-k~~  175 (464)
T KOG0284|consen   97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV-KII  175 (464)
T ss_pred             cceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhh-HHh
Confidence            4799999999999999999999999999754333334578999999999999999999999999999999865432 122


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCCCeEEEEe
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWR  366 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~  366 (573)
                      ...|...|.+++|+|     ....|++++.||+|+|||....+..+++.+|.-.|.|+.|.+. +.+++||.|..|++||
T Consensus       176 ~ahh~eaIRdlafSp-----nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWD  250 (464)
T KOG0284|consen  176 QAHHAEAIRDLAFSP-----NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWD  250 (464)
T ss_pred             hHhhhhhhheeccCC-----CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeec
Confidence            334558999999987     3357999999999999999998888899999999999999865 4666677666666666


Q ss_pred             CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcC
Q psy2671         367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP  446 (573)
Q Consensus       367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~  446 (573)
                      .++|.+                                                                          
T Consensus       251 prSg~c--------------------------------------------------------------------------  256 (464)
T KOG0284|consen  251 PRSGSC--------------------------------------------------------------------------  256 (464)
T ss_pred             CCCcch--------------------------------------------------------------------------
Confidence            655433                                                                          


Q ss_pred             CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC-CCEEEEEeCCCc
Q psy2671         447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-SRLLVSGSADST  525 (573)
Q Consensus       447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d-g~~las~s~D~~  525 (573)
                            +..+.+|...|..+.|+|++++|+++|.|..++++|.++.+.++++++|...|++++|+|- ..+|.+|+.||.
T Consensus       257 ------l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgs  330 (464)
T KOG0284|consen  257 ------LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGS  330 (464)
T ss_pred             ------hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCc
Confidence                  3445567788999999999999999999999999999999999999999999999999994 458889999999


Q ss_pred             EEEEeCCcccccc-cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         526 LKVWNMKTKKIEQ-DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       526 v~vwd~~~~~~~~-~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |..|.+...+.+. .-.+|...|++++|+|=|..|++|+.|.++++|.
T Consensus       331 vvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~  378 (464)
T KOG0284|consen  331 VVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT  378 (464)
T ss_pred             eEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence            9999998544443 3457999999999999999999999999999996

>KOG0263|consensus

Probab=100.00  E-value=8.9e-39  Score=312.03  Aligned_cols=308  Identities=27%  Similarity=0.488  Sum_probs=229.6

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      |..++..-...++|+.|++|+.+||.|-.|..|++|.+...+. .+..+...+     .......+++.          .
T Consensus       370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl-~~lk~~~~l-----~~~d~~sad~~----------~  433 (707)
T KOG0263|consen  370 CMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKL-KKLKDASDL-----SNIDTESADVD----------V  433 (707)
T ss_pred             EEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhh-ccccchhhh-----ccccccccchh----------h
Confidence            3344444456799999999999999999999999999875321 111100000     00000001100          0


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                      .. .+.+.       .....++.||.++|..++|+|+.++|+++|.|+++|+|.+.+...+...+||..+|..+.|+|-|
T Consensus       434 ~~-~D~~~-------~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G  505 (707)
T KOG0263|consen  434 DM-LDDDS-------SGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG  505 (707)
T ss_pred             hh-ccccC-------CceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCc
Confidence            00 00000       01113467999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      -|+||||.|++.++|.......+ +.+.||-.-|.++.|.|     ++.++++||.|.+||+||..++..          
T Consensus       506 yYFatas~D~tArLWs~d~~~Pl-RifaghlsDV~cv~FHP-----Ns~Y~aTGSsD~tVRlWDv~~G~~----------  569 (707)
T KOG0263|consen  506 YYFATASHDQTARLWSTDHNKPL-RIFAGHLSDVDCVSFHP-----NSNYVATGSSDRTVRLWDVSTGNS----------  569 (707)
T ss_pred             eEEEecCCCceeeeeecccCCch-hhhcccccccceEEECC-----cccccccCCCCceEEEEEcCCCcE----------
Confidence            99999999999999998876554 45678888888887776     345666666666666665433322          


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                                                                                                      
T Consensus       570 --------------------------------------------------------------------------------  569 (707)
T KOG0263|consen  570 --------------------------------------------------------------------------------  569 (707)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                                                     .+.+.||..+|.+|+|||+|++||+|+.||.|++||+.+++.+..+.+|
T Consensus       570 -------------------------------VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H  618 (707)
T KOG0263|consen  570 -------------------------------VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH  618 (707)
T ss_pred             -------------------------------EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc
Confidence                                           2233567788999999999999999999999999999999999999999


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc------------------------cccccCcCCCEEEEEEccCCC
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI------------------------EQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~------------------------~~~l~~h~~~v~~~~~s~d~~  557 (573)
                      ++.|+++.||.||..||+||.|++|++||+..-..                        +..+..-..+|..+.|...+-
T Consensus       619 t~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl  698 (707)
T KOG0263|consen  619 TGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNL  698 (707)
T ss_pred             cCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccce
Confidence            99999999999999999999999999999854221                        223333445788888887653


Q ss_pred             EEE
Q psy2671         558 KVA  560 (573)
Q Consensus       558 ~l~  560 (573)
                      .|+
T Consensus       699 ~L~  701 (707)
T KOG0263|consen  699 LLA  701 (707)
T ss_pred             eEE
Confidence            333

>KOG0265|consensus

Probab=100.00  E-value=1.9e-37  Score=269.18  Aligned_cols=296  Identities=25%  Similarity=0.448  Sum_probs=241.5

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...++||++.|..+.|+|+|..+||||.|..|-+|++.....                                     
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdce-------------------------------------   81 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCE-------------------------------------   81 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccc-------------------------------------
Confidence            3446789999999999999999999999999999999653210                                     


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                       ....+.||.+.|..+.|.+|+..++++|.|.+|+.||.++|+.++..++|...|+++.-+.-|
T Consensus        82 -----------------N~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg  144 (338)
T KOG0265|consen   82 -----------------NFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRG  144 (338)
T ss_pred             -----------------ceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccC
Confidence                             012355999999999999999999999999999999999999999999999999999855445


Q ss_pred             C-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         262 K-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       262 ~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      . .+.||+.|+++++||++....+..  ...+-.++++.|..     .+....+|+-|+.|++||++......++.+|..
T Consensus       145 ~~lv~SgsdD~t~kl~D~R~k~~~~t--~~~kyqltAv~f~d-----~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D  217 (338)
T KOG0265|consen  145 PQLVCSGSDDGTLKLWDIRKKEAIKT--FENKYQLTAVGFKD-----TSDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD  217 (338)
T ss_pred             CeEEEecCCCceEEEEeecccchhhc--cccceeEEEEEecc-----cccceeeccccCceeeeccccCcceEEeecccC
Confidence            4 566899999999999986554321  23345678888754     566789999999999999999999999999999


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|+.+..+++| .+.+-+.|.++++||++--.                                                
T Consensus       218 tIt~lsls~~gs~llsnsMd~tvrvwd~rp~~------------------------------------------------  249 (338)
T KOG0265|consen  218 TITGLSLSRYGSFLLSNSMDNTVRVWDVRPFA------------------------------------------------  249 (338)
T ss_pred             ceeeEEeccCCCccccccccceEEEEEecccC------------------------------------------------
Confidence            99999999887 68889999999999975210                                                


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                             |..         ..|.++--.        ..........++|+|++..+..|+.|+.+.+||......+..+.
T Consensus       250 -------p~~---------R~v~if~g~--------~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklp  305 (338)
T KOG0265|consen  250 -------PSQ---------RCVKIFQGH--------IHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLP  305 (338)
T ss_pred             -------CCC---------ceEEEeecc--------hhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcC
Confidence                   000         001111000        00011224567899999999999999999999999889999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ||.+.|++++|+|...+|.+++.|.+|++=+
T Consensus       306 Gh~gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  306 GHYGSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             CcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence            9999999999999999999999999998744

>KOG0281|consensus

Probab=100.00  E-value=6.2e-39  Score=283.32  Aligned_cols=275  Identities=28%  Similarity=0.552  Sum_probs=238.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      ....|.|+.+  |...++||..|+||+|||..+..                                             
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~---------------------------------------------  228 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE---------------------------------------------  228 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHH---------------------------------------------
Confidence            4567999987  56789999999999999986543                                             


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                |...+.||+++|.|+.|.  .+.+++||.|.+|++||+++++++.++.+|...|..+.|+.  .+++++|
T Consensus       229 ----------c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcS  294 (499)
T KOG0281|consen  229 ----------CLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCS  294 (499)
T ss_pred             ----------HHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEec
Confidence                      345678999999999984  56899999999999999999999999999999999999973  4899999


Q ss_pred             eCCeEEEEECCCCce--ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         269 KNGVIHAWDSSTGKQ--IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      .|.++.+||+.....  +...+.||...|..+.|.       .+++++++.|.+|++|++.+.++++++.+|...|.|+.
T Consensus       295 kDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd-------~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ  367 (499)
T KOG0281|consen  295 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ  367 (499)
T ss_pred             CCceeEEEeccCchHHHHHHHHhhhhhheeeeccc-------cceEEEecCCceEEEEeccceeeehhhhcccccceehh
Confidence            999999999976543  234678999999988763       46999999999999999999999999999999999998


Q ss_pred             ECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671         347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC  426 (573)
Q Consensus       347 ~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (573)
                      +.+ ..+++||.|.+|++||+..|.+++.++||..-|.++.|.                                     
T Consensus       368 Yr~-rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd-------------------------------------  409 (499)
T KOG0281|consen  368 YRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-------------------------------------  409 (499)
T ss_pred             ccC-eEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec-------------------------------------
Confidence            753 478999999999999999999999999999988887764                                     


Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCcc--------ceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKK--------SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK  493 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~--------~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~  493 (573)
                        .+.+++|+.||+|++||+.....        ++..+..|.+.|..+.|.  ...|++++.|.+|.+||...+-
T Consensus       410 --~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~  480 (499)
T KOG0281|consen  410 --NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGP  480 (499)
T ss_pred             --CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCC
Confidence              46899999999999999875432        345566788899999985  4689999999999999987653

>KOG0266|consensus

Probab=100.00  E-value=3.2e-37  Score=310.56  Aligned_cols=288  Identities=34%  Similarity=0.646  Sum_probs=250.6

Q ss_pred             CCCC-CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         203 MPGH-AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       203 ~~gh-~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      +.+| ...|.++.|+|+|+++++++.|+.+++|+..+.+  ....+.+|...|.+++|+||++++++++.|++|++||++
T Consensus       154 ~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~  233 (456)
T KOG0266|consen  154 LAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLK  233 (456)
T ss_pred             ecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeecc
Confidence            4444 7899999999999999999999999999997766  666778999999999999999999999999999999995


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ  358 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~  358 (573)
                      ......+.+.+|...|++++|.|     .++++++|+.|++||+||+.++++++.+.+|...|++++|++++ .+++++.
T Consensus       234 ~~~~~~~~l~gH~~~v~~~~f~p-----~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~  308 (456)
T KOG0266|consen  234 DDGRNLKTLKGHSTYVTSVAFSP-----DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASY  308 (456)
T ss_pred             CCCeEEEEecCCCCceEEEEecC-----CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCC
Confidence            55444467889999999999987     45799999999999999999999999999999999999998876 6778888


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      |+.|++||+.++...                                                                 
T Consensus       309 d~~i~vwd~~~~~~~-----------------------------------------------------------------  323 (456)
T KOG0266|consen  309 DGTIRVWDLETGSKL-----------------------------------------------------------------  323 (456)
T ss_pred             CccEEEEECCCCcee-----------------------------------------------------------------
Confidence            888888888765421                                                                 


Q ss_pred             CeEEEEcCCCCccceeeeccccc--cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce---EEEEEECCC
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQ--LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA---VYMVAWSSD  513 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~---v~~v~~s~d  513 (573)
                                   +...+.++..  .++++.|+|+++++++++.|+.+++||++.++.+..+.+|...   +.+...++.
T Consensus       324 -------------~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (456)
T KOG0266|consen  324 -------------CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTG  390 (456)
T ss_pred             -------------eeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCC
Confidence                         0011111122  5899999999999999999999999999999999999998774   444556789


Q ss_pred             CCEEEEEeCCCcEEEEeCCcccccccccCc-CCCEEEEEEccCCCEEEEee--CCCcEEEccC
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGH-GDEVYAVDWAPDGEKVASGG--KDKVLRLWQN  573 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h-~~~v~~~~~s~d~~~l~s~~--~d~~i~iw~~  573 (573)
                      ++++++|+.|+.|++|++.++..+..+.+| ...+..++|+|..+++++++  .|+.+++|.+
T Consensus       391 ~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~  453 (456)
T KOG0266|consen  391 GKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY  453 (456)
T ss_pred             CCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence            999999999999999999999999999999 88999999999999999998  7999999974

>KOG0266|consensus

Probab=100.00  E-value=3.2e-36  Score=303.24  Aligned_cols=293  Identities=34%  Similarity=0.660  Sum_probs=250.5

Q ss_pred             ccCCCc-cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGH-AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH-~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..+.+| ...|.+++|+|+|+++++++.|+.+++|+..+.+.                                      
T Consensus       152 ~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--------------------------------------  193 (456)
T KOG0266|consen  152 QTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--------------------------------------  193 (456)
T ss_pred             eeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--------------------------------------
Confidence            344455 78999999999999999999999999999865431                                      


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEEC-CCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV-TTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~-~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                     .....+.+|...|.+++|+|+++++++++.|++++|||+ ..+..+.++++|...|++++|+|+|
T Consensus       194 ---------------~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g  258 (456)
T KOG0266|consen  194 ---------------NLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG  258 (456)
T ss_pred             ---------------hhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCC
Confidence                           011334689999999999999999999999999999999 5558889999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCC
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHT  339 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~  339 (573)
                      +.+++|+.|++|++||+++++.. ..+.+|...|++++|.+     +++.+++++.|+.|++||+.++.  +...+..+.
T Consensus       259 ~~i~Sgs~D~tvriWd~~~~~~~-~~l~~hs~~is~~~f~~-----d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~  332 (456)
T KOG0266|consen  259 NLLVSGSDDGTVRIWDVRTGECV-RKLKGHSDGISGLAFSP-----DGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAE  332 (456)
T ss_pred             CEEEEecCCCcEEEEeccCCeEE-EeeeccCCceEEEEECC-----CCCEEEEcCCCccEEEEECCCCceeeeecccCCC
Confidence            99999999999999999998776 56889999999999876     67899999999999999999998  567777776


Q ss_pred             cc--EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         340 RS--VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       340 ~~--v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      ..  ++++.|++++ .+++++.|+++++|++..+.....+.+|...+                                 
T Consensus       333 ~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~---------------------------------  379 (456)
T KOG0266|consen  333 NSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLV---------------------------------  379 (456)
T ss_pred             CCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcc---------------------------------
Confidence            65  8999999887 68888999999999988777666655543210                                 


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                                                                  ..+.+..+++.++++++|+.|+.|++||..++..+.
T Consensus       380 --------------------------------------------~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~  415 (456)
T KOG0266|consen  380 --------------------------------------------RCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQ  415 (456)
T ss_pred             --------------------------------------------eeEecccccCCCCeEEEEeCCceEEEEeCCccchhh
Confidence                                                        012233447889999999999999999999999999


Q ss_pred             eecCC-cceEEEEEECCCCCEEEEEe--CCCcEEEEeCC
Q psy2671         497 TLRGH-VQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMK  532 (573)
Q Consensus       497 ~~~~h-~~~v~~v~~s~dg~~las~s--~D~~v~vwd~~  532 (573)
                      .+.+| ...+..++++|...++++++  .|+.+++|..+
T Consensus       416 ~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  416 RLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             hhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            99999 88999999999999999998  79999999753

>KOG1063|consensus

Probab=100.00  E-value=2e-35  Score=283.47  Aligned_cols=465  Identities=22%  Similarity=0.396  Sum_probs=293.5

Q ss_pred             cccCCCccccEEEEEEcCCCC---eeEEeeCCCcEEEeeccCCc--ceeeecCCCee----------------------e
Q psy2671         103 TSSMPGHAEAVISVKFSPNGR---SLASGSGDTTVRFWDVTTQT--PLFKCEGTPYL----------------------F  155 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~---~lat~s~D~~vrvWd~~~~~--~~~~~~~~~~~----------------------~  155 (573)
                      ..++.||..+|+|+.+-|+..   +++||+.|+.|++|.++...  ++..++++...                      +
T Consensus        47 ~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw  126 (764)
T KOG1063|consen   47 VTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVW  126 (764)
T ss_pred             EEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEe
Confidence            457899999999999998877   89999999999999998332  23333331100                      0


Q ss_pred             eecccc--cccc------cccccCCCCCC-ccceEEEEEeceeeEEEeecc----ccccCCCCCCCcEEEEEEcCCC---
Q psy2671         156 YVNETE--ITKT------LADVLPLDTLN-TEEVVDIVYQKQAVFQVRPVT----RCTSSMPGHAEAVISVKFSPNG---  219 (573)
Q Consensus       156 ~~~~~~--~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~gh~~~V~~~~fsp~g---  219 (573)
                      .....+  ....      ....+.+.... .+..+-..........+....    .....+.||++.|.+++|...+   
T Consensus       127 ~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~  206 (764)
T KOG1063|consen  127 DKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDD  206 (764)
T ss_pred             ecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCc
Confidence            000000  0000      00000111111 111111111111111111111    2235678999999999998644   


Q ss_pred             CeEEEEeCCCeEEEEECCCCe-----------------eeE--------------EecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         220 RSLASGSGDTTVRFWDVTTQT-----------------PLF--------------KCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~-----------------~~~--------------~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                      -+|||+|+|..||||.+.-+.                 +.+              .+.||.++|.++.|+|++..|+++|
T Consensus       207 ~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSAS  286 (764)
T KOG1063|consen  207 LLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSAS  286 (764)
T ss_pred             EEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecc
Confidence            378999999999999753211                 111              1249999999999999999999999


Q ss_pred             eCCeEEEEECCCCceecc------cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCC
Q psy2671         269 KNGVIHAWDSSTGKQIGQ------PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCVRVLTSHT  339 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~h~  339 (573)
                      .|.++.+|......-+..      .+.|....-.+.-|.|     +++.+++-|..|..++|.....   .....+.+|.
T Consensus       287 aDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~-----n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~  361 (764)
T KOG1063|consen  287 ADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSP-----NSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHV  361 (764)
T ss_pred             cCcceEEEecCCccceEEEEEEeecccccccceeeEEEcC-----CCCEEEEecccCcEEEEeccCccceeecccccccc
Confidence            999999998765422110      1123333455566655     5578899999999999983221   2334578999


Q ss_pred             ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCe----eeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchh
Q psy2671         340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV----MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEE  413 (573)
Q Consensus       340 ~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~  413 (573)
                      ..|..++|.+.| ++++.|.|.+-|+|-.-..+    .+..-+-|...+.++++-+.....+.......++ +..+..-.
T Consensus       362 ~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv  441 (764)
T KOG1063|consen  362 DGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFV  441 (764)
T ss_pred             ccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHH
Confidence            999999999888 79999999999998654111    1112345666677776655222222221111111 22111000


Q ss_pred             hhhhhhhh--e--eeeCCCCcE----------EEE-EeCCCeE--------------EEEcCCCC--------ccceeee
Q psy2671         414 SSKHALAK--Y--QAQCPEGEK----------LVS-GSDDFTL--------------FLWNPEKE--------KKSLARM  456 (573)
Q Consensus       414 ~~~~~~~~--~--~~~~~~~~~----------l~s-g~~dg~i--------------~lwd~~~~--------~~~~~~~  456 (573)
                      .....+..  .  ....|.+..          +.- ...+|..              .+..+...        -.....+
T Consensus       442 ~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KL  521 (764)
T KOG1063|consen  442 KSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKL  521 (764)
T ss_pred             HHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHh
Confidence            00000000  0  000011100          000 0111111              00011000        0123456


Q ss_pred             ccccccEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         457 TGHQQLINCVEFSPDGRIIASASFDK-----SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       457 ~~h~~~v~~v~~sp~g~~las~s~dg-----~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      .||...|.+++.+|+|+++|+++...     .|++|+..+....+.+.+|.-.|+.++|||||++|++.|.|.++.+|+.
T Consensus       522 YGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~  601 (764)
T KOG1063|consen  522 YGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEV  601 (764)
T ss_pred             ccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeee
Confidence            79999999999999999999997654     4899999988888899999999999999999999999999999999998


Q ss_pred             Ccccc-c---ccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         532 KTKKI-E---QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       532 ~~~~~-~---~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..... .   ..++.|+.-|++++|+|+++++||+|.|++|++|.
T Consensus       602 ~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~  646 (764)
T KOG1063|consen  602 QEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWE  646 (764)
T ss_pred             ecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEe
Confidence            54322 1   23778999999999999999999999999999996

>KOG0316|consensus

Probab=100.00  E-value=2.3e-36  Score=253.43  Aligned_cols=283  Identities=22%  Similarity=0.383  Sum_probs=227.3

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +.|..|.++|.++.|+-||+|.+|++.|++||+||...+.++                                      
T Consensus        11 ~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~li--------------------------------------   52 (307)
T KOG0316|consen   11 SILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALI--------------------------------------   52 (307)
T ss_pred             eeecccccceEEEEEccCCCEEEEcCCCceEEeeccccccee--------------------------------------
Confidence            456789999999999999999999999999999998776544                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                       .+..||...|..++.+.|...+++|++|..|.+||+.+|+.+..+++|.+.|+.++|+.+...
T Consensus        53 -----------------ktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSV  115 (307)
T KOG0316|consen   53 -----------------KTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSV  115 (307)
T ss_pred             -----------------eeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceE
Confidence                             345689999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      +++|+.|.++++||.++....                                              +++++......|.
T Consensus       116 v~SgsfD~s~r~wDCRS~s~e----------------------------------------------PiQildea~D~V~  149 (307)
T KOG0316|consen  116 VASGSFDSSVRLWDCRSRSFE----------------------------------------------PIQILDEAKDGVS  149 (307)
T ss_pred             EEeccccceeEEEEcccCCCC----------------------------------------------ccchhhhhcCcee
Confidence            999999999999998654311                                              1111222223333


Q ss_pred             EEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         344 CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       344 ~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      ++.... ..|++||.||++|.||++.|.+..                                                 
T Consensus       150 Si~v~~-heIvaGS~DGtvRtydiR~G~l~s-------------------------------------------------  179 (307)
T KOG0316|consen  150 SIDVAE-HEIVAGSVDGTVRTYDIRKGTLSS-------------------------------------------------  179 (307)
T ss_pred             EEEecc-cEEEeeccCCcEEEEEeecceeeh-------------------------------------------------
Confidence            333321 245666666666666665543311                                                 


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ  503 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~  503 (573)
                                                     ...  ..+|+|+.|++||+..+.++.|+++++.|-.+|+++...+||..
T Consensus       180 -------------------------------Dy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn  226 (307)
T KOG0316|consen  180 -------------------------------DYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKN  226 (307)
T ss_pred             -------------------------------hhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhccccc
Confidence                                           111  24699999999999999999999999999999999999999987


Q ss_pred             eEE--EEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCC-EEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         504 AVY--MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE-VYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       504 ~v~--~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~-v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .-+  ..+++.....+++||.||.|++||+...+.+..++.|... |.+++++|.-.-|.++..-+ +.+|
T Consensus       227 ~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~-~~~~  296 (307)
T KOG0316|consen  227 MEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATGHG-DLFW  296 (307)
T ss_pred             ceeeeeeeecccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecCCc-eece
Confidence            644  4567777889999999999999999999888888888776 89999999876677665433 4455

>KOG0281|consensus

Probab=100.00  E-value=5.9e-38  Score=277.15  Aligned_cols=273  Identities=30%  Similarity=0.565  Sum_probs=235.3

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      ....|.|+.+  |...+++|..|.+|+|||..+...++.+.||++.|.|+.|  |.+.|++||.|.+|++||+++|.++ 
T Consensus       196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l-  270 (499)
T KOG0281|consen  196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPL-  270 (499)
T ss_pred             cCCceEEEEe--cchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchh-
Confidence            4568999988  4457999999999999999999999999999999999998  4568999999999999999999876 


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---EEEEecCCCccEEEEEECCCcEEEEEeCCCeE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI  362 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i  362 (573)
                      +.+-+|.+.|..+.|+       ..+++++++|.++++||+....   +.+.+.+|...|..+.|+.. .|+++|.|++|
T Consensus       271 ~tlihHceaVLhlrf~-------ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k-yIVsASgDRTi  342 (499)
T KOG0281|consen  271 NTLIHHCEAVLHLRFS-------NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTI  342 (499)
T ss_pred             hHHhhhcceeEEEEEe-------CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc-eEEEecCCceE
Confidence            5677899999999875       3689999999999999997654   33567899999999999765 89999999999


Q ss_pred             EEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEE
Q psy2671         363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF  442 (573)
Q Consensus       363 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~  442 (573)
                      ++|+..++..++++.||...|-++.                                       -.+.++++|+.|.+|+
T Consensus       343 kvW~~st~efvRtl~gHkRGIAClQ---------------------------------------Yr~rlvVSGSSDntIR  383 (499)
T KOG0281|consen  343 KVWSTSTCEFVRTLNGHKRGIACLQ---------------------------------------YRDRLVVSGSSDNTIR  383 (499)
T ss_pred             EEEeccceeeehhhhcccccceehh---------------------------------------ccCeEEEecCCCceEE
Confidence            9999999999999999976554432                                       2378899999999999


Q ss_pred             EEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---------EEEeecCCcceEEEEEECCC
Q psy2671         443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       443 lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---------~~~~~~~h~~~v~~v~~s~d  513 (573)
                      +||.+.+ .++..+.||++.|.|+.|.  .+.|++|++||+|++||..++.         ++.++..|.+.|..+.|.  
T Consensus       384 lwdi~~G-~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--  458 (499)
T KOG0281|consen  384 LWDIECG-ACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--  458 (499)
T ss_pred             EEecccc-HHHHHHhchHHhhhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--
Confidence            9998875 4678899999999999996  5799999999999999987653         345566788999999985  


Q ss_pred             CCEEEEEeCCCcEEEEeCCccc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~  535 (573)
                      ...+++++.|.+|.+||+..+.
T Consensus       459 ~fqIvsssHddtILiWdFl~~~  480 (499)
T KOG0281|consen  459 EFQIISSSHDDTILIWDFLNGP  480 (499)
T ss_pred             ceEEEeccCCCeEEEEEcCCCC
Confidence            5678899999999999986653

>KOG0279|consensus

Probab=100.00  E-value=3e-36  Score=259.20  Aligned_cols=246  Identities=31%  Similarity=0.510  Sum_probs=214.0

Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-----CeEEEEecCCCccEEEEEECCCc-EEEEEe
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-----SQCVRVLTSHTRSVTCIRWGGSG-LIYSAS  357 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s  357 (573)
                      +...+.+|+++|++++..+.    ..+.+++++.|.++.+|++..     +.+++.+.+|...|..+..++++ +.++++
T Consensus         7 l~~tl~gh~d~Vt~la~~~~----~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s   82 (315)
T KOG0279|consen    7 LRGTLEGHTDWVTALAIKIK----NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS   82 (315)
T ss_pred             eeeeecCCCceEEEEEeecC----CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence            34567899999999997663    346899999999999998754     56788899999999999998876 789999


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      +|+++++||+.+|+..+.+.||...|.++++++|                                     ...+++|+.
T Consensus        83 wD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~d-------------------------------------n~qivSGSr  125 (315)
T KOG0279|consen   83 WDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTD-------------------------------------NRQIVSGSR  125 (315)
T ss_pred             ccceEEEEEecCCcEEEEEEecCCceEEEEecCC-------------------------------------CceeecCCC
Confidence            9999999999999999999999999999998854                                     678999999


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                      |++|++|+.-........-.++.+.|+|+.|+|+  ..+|+++|.|++|++||+++.+....+.||...++.+++||||.
T Consensus       126 DkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs  205 (315)
T KOG0279|consen  126 DKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS  205 (315)
T ss_pred             cceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC
Confidence            9999999976544322222234789999999997  67999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.++|+.||.+.+||++.++.++.+. |...|.+++|+|+.-+|+ +..+..|+||+
T Consensus       206 lcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~-~at~~sIkIwd  260 (315)
T KOG0279|consen  206 LCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLC-AATATSIKIWD  260 (315)
T ss_pred             EEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEe-eccCCceEEEe
Confidence            99999999999999999999988876 678999999999865555 44555699997

>KOG0284|consensus

Probab=100.00  E-value=1.4e-37  Score=280.61  Aligned_cols=282  Identities=24%  Similarity=0.448  Sum_probs=243.6

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -..+|..|.+.|+|+.|+||++.|.+.+|+..+-.                                             
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn---------------------------------------------  129 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN---------------------------------------------  129 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceee---------------------------------------------
Confidence            34579999999999999999999999999963211                                             


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC-CCCcEEEEEEcCCCCeEEEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~s~dg~~l~sg  267 (573)
                                ....+..|..+|.++.||++|.+++||..+|.|++|+..-.. +..+.+ |...|++++|||....++++
T Consensus       130 ----------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn-Vk~~~ahh~eaIRdlafSpnDskF~t~  198 (464)
T KOG0284|consen  130 ----------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN-VKIIQAHHAEAIRDLAFSPNDSKFLTC  198 (464)
T ss_pred             ----------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh-hHHhhHhhhhhhheeccCCCCceeEEe
Confidence                      012356799999999999999999999999999999975433 333444 44889999999999999999


Q ss_pred             eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW  347 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  347 (573)
                      |.||+|+|||....+.. ..+.||.--|.++.|.|.     ...++++|+|..|++||.+++.|+.++.+|...|..+.|
T Consensus       199 SdDg~ikiWdf~~~kee-~vL~GHgwdVksvdWHP~-----kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f  272 (464)
T KOG0284|consen  199 SDDGTIKIWDFRMPKEE-RVLRGHGWDVKSVDWHPT-----KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKF  272 (464)
T ss_pred             cCCCeEEEEeccCCchh-heeccCCCCcceeccCCc-----cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEE
Confidence            99999999999877654 456899999999999984     357999999999999999999999999999999999999


Q ss_pred             CCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671         348 GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC  426 (573)
Q Consensus       348 ~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (573)
                      ++++ .|+++|.|..++++|+++.+.+.++++|...++++++++-                                   
T Consensus       273 ~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~-----------------------------------  317 (464)
T KOG0284|consen  273 NPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL-----------------------------------  317 (464)
T ss_pred             cCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc-----------------------------------
Confidence            8876 8999999999999999988888889999999998887753                                   


Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                       ...+|++|+.||.|..|...........-.+|...|.+++|+|-|.+|++|+.|.++++|.
T Consensus       318 -~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~  378 (464)
T KOG0284|consen  318 -NESLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT  378 (464)
T ss_pred             -cccceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence             2458999999999999987744444455568999999999999999999999999999995

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=5.5e-35  Score=280.25  Aligned_cols=285  Identities=40%  Similarity=0.732  Sum_probs=246.9

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      ++.+|.++|.+++|+|++++|++++.|+.+++|++.++........|...+.++.|+|++++|++++.||.|++|++..+
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~   83 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETG   83 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcc
Confidence            45689999999999999999999999999999999988888888899999999999999999999999999999999876


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCC
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR  360 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~  360 (573)
                      +.. ..+..|...+.++.|.|.     ++.+++++.+|.+++||+...+....+..|...+.++.|++++ .+++++.|+
T Consensus        84 ~~~-~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~  157 (289)
T cd00200          84 ECV-RTLTGHTSYVSSVAFSPD-----GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDG  157 (289)
T ss_pred             cce-EEEeccCCcEEEEEEcCC-----CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCC
Confidence            544 345678888999998763     4677877789999999999888888888888889999988765 444555577


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      .+++||++++..                                                                    
T Consensus       158 ~i~i~d~~~~~~--------------------------------------------------------------------  169 (289)
T cd00200         158 TIKLWDLRTGKC--------------------------------------------------------------------  169 (289)
T ss_pred             cEEEEEcccccc--------------------------------------------------------------------
Confidence            777777653321                                                                    


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG  520 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~  520 (573)
                                  ...+..|...+.++.|+|+++.+++++.|+.|++||.+.++.+..+..|...+.+++|+|++.+++++
T Consensus       170 ------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  237 (289)
T cd00200         170 ------------VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG  237 (289)
T ss_pred             ------------ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEE
Confidence                        11223455678999999999999999999999999999998888888898899999999999999998


Q ss_pred             eCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         521 SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       521 s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.|+.|++|++.+++....+.+|...|.++.|+|++++|++++.|+.+++|+
T Consensus       238 ~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             cCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            8899999999998888888889999999999999999999999999999996

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1e-34  Score=278.37  Aligned_cols=286  Identities=41%  Similarity=0.758  Sum_probs=244.1

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..+.+|.++|++++|+|++++|++++.|+.|++||+.++...                                      
T Consensus         3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~--------------------------------------   44 (289)
T cd00200           3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL--------------------------------------   44 (289)
T ss_pred             hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcE--------------------------------------
Confidence            356789999999999999999999999999999998765422                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                       ..+.+|...+.++.|+|+++.+++++.|+.|++||+.+++.+..+..|...+.++.|+|++++
T Consensus        45 -----------------~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  107 (289)
T cd00200          45 -----------------RTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRI  107 (289)
T ss_pred             -----------------EEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCE
Confidence                             123467888999999999999999999999999999988888888899999999999999888


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      +++++.+|.+++||+.+++.. ..+..|...+.++.|.|.     +..+++++.|+.+++||+..++....+..|...+.
T Consensus       108 ~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~-----~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~  181 (289)
T cd00200         108 LSSSSRDKTIKVWDVETGKCL-TTLRGHTDWVNSVAFSPD-----GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVN  181 (289)
T ss_pred             EEEecCCCeEEEEECCCcEEE-EEeccCCCcEEEEEEcCc-----CCEEEEEcCCCcEEEEEccccccceeEecCccccc
Confidence            888888999999999877654 345578889999998873     46777777799999999998888888888888999


Q ss_pred             EEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         344 CIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       344 ~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ++.|.+++ .+++++.|+.+++|+.+.+...                                                 
T Consensus       182 ~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~-------------------------------------------------  212 (289)
T cd00200         182 SVAFSPDGEKLLSSSSDGTIKLWDLSTGKCL-------------------------------------------------  212 (289)
T ss_pred             eEEECCCcCEEEEecCCCcEEEEECCCCcee-------------------------------------------------
Confidence            99998876 6777777888888876543221                                                 


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                     ..+..|...+.++.|+|++.++++++.||.+++||..+++.+..+.+|.
T Consensus       213 -------------------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~  261 (289)
T cd00200         213 -------------------------------GTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHT  261 (289)
T ss_pred             -------------------------------cchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccC
Confidence                                           1122455678999999999999999889999999999999999999999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ..+.+++|+|++++|++++.|+.+++|+
T Consensus       262 ~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         262 NSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             CcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            9999999999999999999999999996

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.8e-34  Score=312.77  Aligned_cols=299  Identities=19%  Similarity=0.331  Sum_probs=236.2

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|.+.|.+++|+|+|+++|||+.|++|+|||..+...-.....                                  
T Consensus       478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~----------------------------------  523 (793)
T PLN00181        478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIH----------------------------------  523 (793)
T ss_pred             cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccc----------------------------------
Confidence            4567999999999999999999999999999999754210000000                                  


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC-CCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~-dg~  262 (573)
                                   .....+. +...|.+++|+| ++.+||+++.|++|++||+.+++.+..+.+|...|.+++|+| ++.
T Consensus       524 -------------~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~  589 (793)
T PLN00181        524 -------------YPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPT  589 (793)
T ss_pred             -------------cceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCC
Confidence                         0000111 235789999987 478999999999999999999998999999999999999996 788


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-EEEEecCCCcc
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTRS  341 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~h~~~  341 (573)
                      +|++|+.||+|++||+.++..+.. +.. ...+.++.|.+    .++..+++|+.||.|++||+...+ +...+.+|...
T Consensus       590 ~L~Sgs~Dg~v~iWd~~~~~~~~~-~~~-~~~v~~v~~~~----~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~  663 (793)
T PLN00181        590 LLASGSDDGSVKLWSINQGVSIGT-IKT-KANICCVQFPS----ESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKT  663 (793)
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEE-Eec-CCCeEEEEEeC----CCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCC
Confidence            999999999999999998876533 233 35678888754    357789999999999999998765 56677899999


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      |.++.|.+...+++++.|++|++||+..+...                                                
T Consensus       664 V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~------------------------------------------------  695 (793)
T PLN00181        664 VSYVRFVDSSTLVSSSTDNTLKLWDLSMSISG------------------------------------------------  695 (793)
T ss_pred             EEEEEEeCCCEEEEEECCCEEEEEeCCCCccc------------------------------------------------
Confidence            99999987678899999999999987532100                                                


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe----
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT----  497 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~----  497 (573)
                                                .....+..+.+|...+.+++|+|++.+||+|+.|+.|++|+......+..    
T Consensus       696 --------------------------~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~  749 (793)
T PLN00181        696 --------------------------INETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFK  749 (793)
T ss_pred             --------------------------cCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecc
Confidence                                      00112344667888899999999999999999999999999765533221    


Q ss_pred             ---------ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         498 ---------LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       498 ---------~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                               ...|...|.+++|+|++..|++|+.||.|+||++
T Consensus       750 ~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        750 TIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             cCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence                     1235567999999999999999999999999986

>KOG0293|consensus

Probab=100.00  E-value=4e-36  Score=271.38  Aligned_cols=286  Identities=27%  Similarity=0.451  Sum_probs=228.6

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd  277 (573)
                      ..+..|++.|+-+.||++|++||||+.|.+..||++...   +..+++.+|..+|.-+.||||.++|++++.|..+.+||
T Consensus       218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwD  297 (519)
T KOG0293|consen  218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWD  297 (519)
T ss_pred             hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeecc
Confidence            456789999999999999999999999999999987654   34678999999999999999999999999999999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCccEEEEEECCCcEEEEE
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-HTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~  356 (573)
                      +.+|........++...+.+++|.|     ++..+++|+.|+++..||+.... ...-.+ ....|.+++..        
T Consensus       298 v~tgd~~~~y~~~~~~S~~sc~W~p-----Dg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait--------  363 (519)
T KOG0293|consen  298 VDTGDLRHLYPSGLGFSVSSCAWCP-----DGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAIT--------  363 (519)
T ss_pred             CCcchhhhhcccCcCCCcceeEEcc-----CCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEc--------
Confidence            9999876555556778899999988     66789999999999999975332 111111 11223333333        


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                                                                                            ++|+++++-.
T Consensus       364 ----------------------------------------------------------------------~Dgk~vl~v~  373 (519)
T KOG0293|consen  364 ----------------------------------------------------------------------YDGKYVLLVT  373 (519)
T ss_pred             ----------------------------------------------------------------------CCCcEEEEEe
Confidence                                                                                  3455555555


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE--EECC-C
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV--AWSS-D  513 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v--~~s~-d  513 (573)
                      .|..+++++.+..... . +..-..+|++...|.||+++++.-.+..+++||.+..+.++.+.||+..-+-+  +|.. +
T Consensus       374 ~d~~i~l~~~e~~~dr-~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~  451 (519)
T KOG0293|consen  374 VDKKIRLYNREARVDR-G-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN  451 (519)
T ss_pred             cccceeeechhhhhhh-c-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC
Confidence            6666666665432111 0 12224579999999999999999999999999999888888999998764433  4543 5


Q ss_pred             CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCC-CEEEEeeCCCcEEEcc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~-~~l~s~~~d~~i~iw~  572 (573)
                      ..++|+||.|+.|+||+..+++++..|.||...|++++|+|.. .++||||.||+||||.
T Consensus       452 ~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg  511 (519)
T KOG0293|consen  452 DKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWG  511 (519)
T ss_pred             cceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEec
Confidence            5899999999999999999999999999999999999999965 5699999999999996

>KOG0293|consensus

Probab=100.00  E-value=5.9e-36  Score=270.27  Aligned_cols=293  Identities=25%  Similarity=0.430  Sum_probs=229.9

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      .+.|..|++.|+-+.||++|++|||+|.|.|..+|++.....+                                     
T Consensus       217 ~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~-------------------------------------  259 (519)
T KOG0293|consen  217 WQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHF-------------------------------------  259 (519)
T ss_pred             hhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcce-------------------------------------
Confidence            4567789999999999999999999999999999997532110                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDS  261 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg  261 (573)
                                     +...++.||..+|.-+.||||.++|++++.|..+++||+.++.....+. +|...+.|++|.|||
T Consensus       260 ---------------kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg  324 (519)
T KOG0293|consen  260 ---------------KLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDG  324 (519)
T ss_pred             ---------------eeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCC
Confidence                           1235677999999999999999999999999999999999998765543 456789999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCC-cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      ..+++|+.|+.+..||.+... +. ...+- ...|.+++..     .+|+.+++.+.|..|++++.........+.. ..
T Consensus       325 ~~~V~Gs~dr~i~~wdlDgn~-~~-~W~gvr~~~v~dlait-----~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise-~~  396 (519)
T KOG0293|consen  325 FRFVTGSPDRTIIMWDLDGNI-LG-NWEGVRDPKVHDLAIT-----YDGKYVLLVTVDKKIRLYNREARVDRGLISE-EQ  396 (519)
T ss_pred             ceeEecCCCCcEEEecCCcch-hh-cccccccceeEEEEEc-----CCCcEEEEEecccceeeechhhhhhhccccc-cC
Confidence            999999999999999986432 21 12222 2346677644     4789999999999999999876655433333 45


Q ss_pred             cEEEEEECCCcE-EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      +|++...+.++. +++--.+..+.+||+.+...++.+.||...                                     
T Consensus       397 ~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~-------------------------------------  439 (519)
T KOG0293|consen  397 PITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQG-------------------------------------  439 (519)
T ss_pred             ceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhccccc-------------------------------------
Confidence            788888888774 555567888888888766666666555321                                     


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC-CCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS-PDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s-p~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                                .++                              |. -+|- .+..++|+||.|+.|+||+..+|+++.++
T Consensus       440 ----------~fi------------------------------Ir-SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L  478 (519)
T KOG0293|consen  440 ----------HFI------------------------------IR-SCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL  478 (519)
T ss_pred             ----------ceE------------------------------EE-eccCCCCcceEEecCCCceEEEEEccCCceeEee
Confidence                      000                              11 1222 24479999999999999999999999999


Q ss_pred             cCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCCc
Q psy2671         499 RGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~  533 (573)
                      .||...|+|++|+|.. .++|+||.||+||||-...
T Consensus       479 sGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  479 SGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             cCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            9999999999999955 5799999999999997753

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.7e-34  Score=312.80  Aligned_cols=303  Identities=19%  Similarity=0.359  Sum_probs=246.2

Q ss_pred             CCeEEEEECCCCeeeEE-----ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC----ceecc--cccCCcccEE
Q psy2671         228 DTTVRFWDVTTQTPLFK-----CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG----KQIGQ--PMRGHKQWIT  296 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~-----~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~----~~~~~--~~~~h~~~v~  296 (573)
                      +|-+++|+.........     +..|...|.+++|+|+|++||+|+.|+.|++|+....    .....  ....+...+.
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~  536 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLS  536 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCcee
Confidence            67788898876544322     3458999999999999999999999999999997542    11100  0112345688


Q ss_pred             EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-C-cEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671         297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-S-GLIYSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~s~d~~i~vw~~~~~~~~~  374 (573)
                      +++|.|.    .+.++++++.||+|++||+.+++.+..+.+|...|.+++|++ + ..+++|+.|++|++||++++....
T Consensus       537 ~l~~~~~----~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~  612 (793)
T PLN00181        537 GICWNSY----IKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG  612 (793)
T ss_pred             eEEeccC----CCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence            8999774    356899999999999999999999999999999999999985 4 479999999999999999887776


Q ss_pred             eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee
Q psy2671         375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA  454 (573)
Q Consensus       375 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~  454 (573)
                      .+..+ ..+..+.+.                                    .+++.++++|+.||+|++||++.......
T Consensus       613 ~~~~~-~~v~~v~~~------------------------------------~~~g~~latgs~dg~I~iwD~~~~~~~~~  655 (793)
T PLN00181        613 TIKTK-ANICCVQFP------------------------------------SESGRSLAFGSADHKVYYYDLRNPKLPLC  655 (793)
T ss_pred             EEecC-CCeEEEEEe------------------------------------CCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence            66544 234444332                                    14578999999999999999987665666


Q ss_pred             eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC------CeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671         455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI------GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV  528 (573)
Q Consensus       455 ~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~------~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~v  528 (573)
                      .+.+|...|.++.|. ++.+|++++.|++|++||.+.      .+.+..+.+|...+.+++|+|++++||+|+.|+.|++
T Consensus       656 ~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~i  734 (793)
T PLN00181        656 TMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV  734 (793)
T ss_pred             EecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEE
Confidence            778999999999997 688999999999999999874      3567889999999999999999999999999999999


Q ss_pred             EeCCcccccc-------------cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         529 WNMKTKKIEQ-------------DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       529 wd~~~~~~~~-------------~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |+........             ....|...|.+++|+|++..|++|+.||.|++|+
T Consensus       735 w~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~  791 (793)
T PLN00181        735 YHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE  791 (793)
T ss_pred             EECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence            9976543211             1234566799999999999999999999999997

>KOG0282|consensus

Probab=100.00  E-value=1.4e-36  Score=280.10  Aligned_cols=290  Identities=26%  Similarity=0.485  Sum_probs=236.4

Q ss_pred             ccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCC-CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         198 RCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       198 ~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                      +...++.||+..|+++.|.| .+.+|+++++|+.|+||++.. +.++.++.||..+|..++|+++|..++|+|.|+.+++
T Consensus       205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl  284 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL  284 (503)
T ss_pred             hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence            44567899999999999999 899999999999999999876 7889999999999999999999999999999999999


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY  354 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~  354 (573)
                      ||+++|+++...-.+  ..++++.|.|..    .+.|++|+.|+.|+.||+++++.++....|-+.|..+.|-+++ .++
T Consensus       285 wDtETG~~~~~f~~~--~~~~cvkf~pd~----~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFi  358 (503)
T KOG0282|consen  285 WDTETGQVLSRFHLD--KVPTCVKFHPDN----QNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFI  358 (503)
T ss_pred             eccccceEEEEEecC--CCceeeecCCCC----CcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEe
Confidence            999999876432222  245677777742    4678889999999999998888777777788888888876655 567


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +.+.|+++++|+.+.+..++.                                                           
T Consensus       359 ssSDdks~riWe~~~~v~ik~-----------------------------------------------------------  379 (503)
T KOG0282|consen  359 SSSDDKSVRIWENRIPVPIKN-----------------------------------------------------------  379 (503)
T ss_pred             eeccCccEEEEEcCCCccchh-----------------------------------------------------------
Confidence            777777777776654322110                                                           


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---EEEeecCCcce--EEEEE
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---FITTLRGHVQA--VYMVA  509 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---~~~~~~~h~~~--v~~v~  509 (573)
                                        ......|+  ..|+..+|+++.++.-+.|..|.++.+...-   .-..+.||..+  -..+.
T Consensus       380 ------------------i~~~~~hs--mP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~  439 (503)
T KOG0282|consen  380 ------------------IADPEMHT--MPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVD  439 (503)
T ss_pred             ------------------hcchhhcc--CcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEE
Confidence                              11111232  5688999999999999999999999865321   22456788543  34689


Q ss_pred             ECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCC-CEEEEeeCCCcEEEcc
Q psy2671         510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       510 ~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~-~~l~s~~~d~~i~iw~  572 (573)
                      |||||.+|++|+.||.+.+||.++.+++..+++|.+.+..++|+|.. ..+|+||.||.|++|+
T Consensus       440 fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  440 FSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            99999999999999999999999999999999999999999999964 4699999999999996

>KOG2106|consensus

Probab=100.00  E-value=1e-32  Score=255.50  Aligned_cols=405  Identities=20%  Similarity=0.355  Sum_probs=284.3

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCC--------cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCC
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDT--------TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLD  173 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~--------~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (573)
                      ..+.+.||++.|.|++.|||.-.+|||-.-|        .|||||..+-+.++.+......            ....++.
T Consensus        96 ~Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~G------------V~~vaFs  163 (626)
T KOG2106|consen   96 SQRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRG------------VTCVAFS  163 (626)
T ss_pred             hcccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeecccccc------------ceeeeec
Confidence            4456779999999999999999999986555        4999998776655433211100            0011111


Q ss_pred             CCCccceEEEEEe-ceeeEEEee--ccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE---ecC
Q psy2671         174 TLNTEEVVDIVYQ-KQAVFQVRP--VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK---CEG  247 (573)
Q Consensus       174 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~---~~~  247 (573)
                      ..+.+..+..... ....+.++.  ..........-++.|..+.|+|.+..|....+.+.+.+|+++++....+   +++
T Consensus       164 k~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek  243 (626)
T KOG2106|consen  164 KINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEK  243 (626)
T ss_pred             ccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeecccc
Confidence            1122221111111 111111111  0111122334567889999999998888888899999999988754433   222


Q ss_pred             C-CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         248 H-KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       248 h-~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      + +..|.|++|.++|+ +++|..+|.|.+|+..+.+...+.. .|.+.|.+++...     + ..|++|++|+.|..||-
T Consensus       244 ~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~-aH~ggv~~L~~lr-----~-GtllSGgKDRki~~Wd~  315 (626)
T KOG2106|consen  244 REKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVH-AHDGGVFSLCMLR-----D-GTLLSGGKDRKIILWDD  315 (626)
T ss_pred             ccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEee-ecCCceEEEEEec-----C-ccEeecCccceEEeccc
Confidence            2 36799999999996 8899999999999997665544444 9999999998643     2 35778999999999994


Q ss_pred             CCCeEEE--EecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         327 ILSQCVR--VLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       327 ~~~~~~~--~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      .-. ..+  .+....+.|..++-...+ |+.|...+.|..=.++++.. ....+|......++..               
T Consensus       316 ~y~-k~r~~elPe~~G~iRtv~e~~~d-i~vGTtrN~iL~Gt~~~~f~-~~v~gh~delwgla~h---------------  377 (626)
T KOG2106|consen  316 NYR-KLRETELPEQFGPIRTVAEGKGD-ILVGTTRNFILQGTLENGFT-LTVQGHGDELWGLATH---------------  377 (626)
T ss_pred             ccc-ccccccCchhcCCeeEEecCCCc-EEEeeccceEEEeeecCCce-EEEEecccceeeEEcC---------------
Confidence            322 222  244556778888765554 77787777776555554432 3445666666655544               


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                            |..+++++++.|+.+++|+  ..+....++.  .+++.|+.|+|.| .+|.|+..|..
T Consensus       378 ----------------------ps~~q~~T~gqdk~v~lW~--~~k~~wt~~~--~d~~~~~~fhpsg-~va~Gt~~G~w  430 (626)
T KOG2106|consen  378 ----------------------PSKNQLLTCGQDKHVRLWN--DHKLEWTKII--EDPAECADFHPSG-VVAVGTATGRW  430 (626)
T ss_pred             ----------------------CChhheeeccCcceEEEcc--CCceeEEEEe--cCceeEeeccCcc-eEEEeeccceE
Confidence                                  5577899999999999999  3333333333  4568999999999 99999999999


Q ss_pred             EEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc-cccc-cCcCCCEEEEEEccCCCEEEEe
Q psy2671         485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI-EQDL-PGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       485 ~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~-~~~l-~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      .+.|..+...+..-.. ..++++++|+|+|.+||.|+.|+.|+||.+..... +... ..|..+|+.++||+|+++|.+.
T Consensus       431 ~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~  509 (626)
T KOG2106|consen  431 FVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSN  509 (626)
T ss_pred             EEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEec
Confidence            9999998655544333 78999999999999999999999999999865432 2211 2233799999999999999999


Q ss_pred             eCCCcEEEcc
Q psy2671         563 GKDKVLRLWQ  572 (573)
Q Consensus       563 ~~d~~i~iw~  572 (573)
                      +.|-.|..|.
T Consensus       510 S~d~eiLyW~  519 (626)
T KOG2106|consen  510 SGDYEILYWK  519 (626)
T ss_pred             cCceEEEEEc
Confidence            9999999984

>KOG0276|consensus

Probab=100.00  E-value=1.8e-34  Score=273.64  Aligned_cols=284  Identities=25%  Similarity=0.403  Sum_probs=254.4

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      .+..|++.|.++.|+|...+++++-.+|.|.|||.++...+..+.--.-+|++..|-+-.+.+++|+.|..|+||+.+++
T Consensus         8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~   87 (794)
T KOG0276|consen    8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTG   87 (794)
T ss_pred             HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccc
Confidence            34458899999999999999999999999999999999888888777788999999998899999999999999999999


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCC--cEEEEEeC
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGS--GLIYSASQ  358 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~  358 (573)
                      ..+ ..+.+|.+.|.+++.+|.     ..+++|+|.|.+|++||.... .+.+++.+|+.-|.+++|.|.  +.+++++-
T Consensus        88 ekV-~~FeAH~DyIR~iavHPt-----~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL  161 (794)
T KOG0276|consen   88 EKV-KTFEAHSDYIRSIAVHPT-----LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL  161 (794)
T ss_pred             eee-EEeeccccceeeeeecCC-----CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence            876 457899999999998884     358999999999999999766 577889999999999999875  48999999


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      |++|++|.+....+..+++||...|+++.+-+.                                   ++..+|++|++|
T Consensus       162 DrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~-----------------------------------gdkpylIsgaDD  206 (794)
T KOG0276|consen  162 DRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTG-----------------------------------GDKPYLISGADD  206 (794)
T ss_pred             cccEEEEEcCCCCCceeeeccccCcceEEeccC-----------------------------------CCcceEEecCCC
Confidence            999999999999999999999999998876432                                   456799999999


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la  518 (573)
                      .++++||.++ +.++.++.||...|+.+.|+|.-.++++||.||++|||+..+.+...++.-...+++|++-.+.+..++
T Consensus       207 ~tiKvWDyQt-k~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~  285 (794)
T KOG0276|consen  207 LTIKVWDYQT-KSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIA  285 (794)
T ss_pred             ceEEEeecch-HHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEE
Confidence            9999999987 456788999999999999999999999999999999999999988888887778999999999888888


Q ss_pred             EEeCCCcEE
Q psy2671         519 SGSADSTLK  527 (573)
Q Consensus       519 s~s~D~~v~  527 (573)
                      .|...|.|.
T Consensus       286 vG~Deg~i~  294 (794)
T KOG0276|consen  286 VGFDEGSVT  294 (794)
T ss_pred             EeccCCcEE
Confidence            888777654

>KOG0292|consensus

Probab=100.00  E-value=1.4e-34  Score=284.25  Aligned_cols=316  Identities=24%  Similarity=0.417  Sum_probs=253.3

Q ss_pred             CCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671         106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY  185 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (573)
                      |..-+..|.+++|||..+|++|+=..|.|++||+.=+++                                         
T Consensus         5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tl-----------------------------------------   43 (1202)
T KOG0292|consen    5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTL-----------------------------------------   43 (1202)
T ss_pred             hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhH-----------------------------------------
Confidence            334567899999999999999999999999999865443                                         


Q ss_pred             eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                                    ...+..|.++|..++|+|++..++|||.|..|++|++++.++++++.||-+.|+.+.|++.-..|+
T Consensus        44 --------------i~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIl  109 (1202)
T KOG0292|consen   44 --------------IDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWIL  109 (1202)
T ss_pred             --------------HhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEE
Confidence                          345778999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEE
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI  345 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  345 (573)
                      |+|.|.+|++|+..+++++ ..+.||...|.+..|.|     ..+.++++|-|.+||+||+..-+....-.+      ++
T Consensus       110 SASDDQTIrIWNwqsr~~i-avltGHnHYVMcAqFhp-----tEDlIVSaSLDQTVRVWDisGLRkk~~~pg------~~  177 (1202)
T KOG0292|consen  110 SASDDQTIRIWNWQSRKCI-AVLTGHNHYVMCAQFHP-----TEDLIVSASLDQTVRVWDISGLRKKNKAPG------SL  177 (1202)
T ss_pred             EccCCCeEEEEeccCCceE-EEEecCceEEEeeccCC-----ccceEEEecccceEEEEeecchhccCCCCC------Cc
Confidence            9999999999999999887 46899999999999987     346899999999999999854322111111      00


Q ss_pred             EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .   +  ...+.. +.--++--.+......++||...|+-.+++                                    
T Consensus       178 e---~--~~~~~~-~~~dLfg~~DaVVK~VLEGHDRGVNwaAfh------------------------------------  215 (1202)
T KOG0292|consen  178 E---D--QMRGQQ-GNSDLFGQTDAVVKHVLEGHDRGVNWAAFH------------------------------------  215 (1202)
T ss_pred             h---h--hhhccc-cchhhcCCcCeeeeeeecccccccceEEec------------------------------------
Confidence            0   0  000000 000111111223345678888877776665                                    


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCc-cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA  504 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~  504 (573)
                       |.-..+++|++|..|++|.+...+ -..-...||...|.++-|+|...+|+|.|.|++|++||......+++++....+
T Consensus       216 -pTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendR  294 (1202)
T KOG0292|consen  216 -PTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDR  294 (1202)
T ss_pred             -CCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCe
Confidence             445789999999999999876432 245567899999999999999999999999999999999998899999877789


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .+.++-+|..+++|+| .|+-+-+|.+.
T Consensus       295 FW~laahP~lNLfAAg-HDsGm~VFkle  321 (1202)
T KOG0292|consen  295 FWILAAHPELNLFAAG-HDSGMIVFKLE  321 (1202)
T ss_pred             EEEEEecCCcceeeee-cCCceEEEEEc
Confidence            9999999999888755 66666666654

>KOG1408|consensus

Probab=100.00  E-value=6.3e-34  Score=273.50  Aligned_cols=228  Identities=18%  Similarity=0.351  Sum_probs=175.7

Q ss_pred             EEEEEeCCCcEEEEECCCCe---E----------EEEec------------------------CCCccEEEEEECCCc-E
Q psy2671         311 RFASSGKDGAIRIWDVILSQ---C----------VRVLT------------------------SHTRSVTCIRWGGSG-L  352 (573)
Q Consensus       311 ~l~s~~~dg~v~iwd~~~~~---~----------~~~~~------------------------~h~~~v~~~~~~~~~-~  352 (573)
                      .|+|++.|++||+|++..+.   .          .+...                        .-...+.+++.++++ .
T Consensus       394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh  473 (1080)
T KOG1408|consen  394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH  473 (1080)
T ss_pred             ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence            58899999999999986521   0          00000                        012368999999998 6


Q ss_pred             EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      +++|..-|+|++|++.+-.....++.|..+|.++.++....                                  ..++|
T Consensus       474 LAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~----------------------------------~~kLL  519 (1080)
T KOG1408|consen  474 LASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVL----------------------------------TNKLL  519 (1080)
T ss_pred             ecccCccCceEEEEehhhhhhhheecccceeEEEeecCchh----------------------------------hhHhh
Confidence            99999999999999998888888899999998887764311                                  11233


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeecccc-------------------------------------------------ccE
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQ-------------------------------------------------QLI  463 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~-------------------------------------------------~~v  463 (573)
                      |+++.|..|.+||....-..+..+.+|.                                                 ..+
T Consensus       520 ASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTl  599 (1080)
T KOG1408|consen  520 ASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTL  599 (1080)
T ss_pred             hhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceE
Confidence            3333333333333322111111222222                                                 236


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671         464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l  540 (573)
                      +.++..|..+++++++.|+.|+|||+.+|+..+.|++   |.+..-.+...|.|-|||+.+.|.++.++|..+++++..+
T Consensus       600 YDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m  679 (1080)
T KOG1408|consen  600 YDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM  679 (1080)
T ss_pred             EEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh
Confidence            6777788889999999999999999999999999875   5566778889999999999999999999999999999999


Q ss_pred             cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       541 ~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .||.+.|+.+.|++|-+.|++++.||.|.+|+
T Consensus       680 ~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~  711 (1080)
T KOG1408|consen  680 TGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK  711 (1080)
T ss_pred             cCcchheeeeeecccchhheeecCCceEEEEE
Confidence            99999999999999999999999999999996

>KOG0282|consensus

Probab=100.00  E-value=2e-35  Score=272.55  Aligned_cols=292  Identities=26%  Similarity=0.505  Sum_probs=231.8

Q ss_pred             ccccccCCCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCcc
Q psy2671         100 TRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTE  178 (573)
Q Consensus       100 ~~~~~~~~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (573)
                      .+.+.++.||+..|+++.|.| .+-+|++||.|+.|+|||+...                                    
T Consensus       204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------------------------------------  247 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------------------------------------  247 (503)
T ss_pred             HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------------------------------------
Confidence            355678999999999999999 8899999999999999998641                                    


Q ss_pred             ceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671         179 EVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s  258 (573)
                                        .+|..++.||+.+|.+++|+++|..++|+|-|+.+++||+++|+.+..+..- ..+.|+.|.
T Consensus       248 ------------------~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~-~~~~cvkf~  308 (503)
T KOG0282|consen  248 ------------------RRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLD-KVPTCVKFH  308 (503)
T ss_pred             ------------------cceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecC-CCceeeecC
Confidence                              2355778899999999999999999999999999999999999988776432 347899999


Q ss_pred             CCC-CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         259 PDS-KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       259 ~dg-~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      ||+ +.+++|+.|+.|+.||+++++.+ +....|-+.|..+.|.+     .++++++++.|+++|||+....-+++.+..
T Consensus       309 pd~~n~fl~G~sd~ki~~wDiRs~kvv-qeYd~hLg~i~~i~F~~-----~g~rFissSDdks~riWe~~~~v~ik~i~~  382 (503)
T KOG0282|consen  309 PDNQNIFLVGGSDKKIRQWDIRSGKVV-QEYDRHLGAILDITFVD-----EGRRFISSSDDKSVRIWENRIPVPIKNIAD  382 (503)
T ss_pred             CCCCcEEEEecCCCcEEEEeccchHHH-HHHHhhhhheeeeEEcc-----CCceEeeeccCccEEEEEcCCCccchhhcc
Confidence            999 77889999999999999999844 55677888899998876     578999999999999999987766554332


Q ss_pred             -CCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         338 -HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       338 -h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                       +...+.|+...|+                                                                  
T Consensus       383 ~~~hsmP~~~~~P~------------------------------------------------------------------  396 (503)
T KOG0282|consen  383 PEMHTMPCLTLHPN------------------------------------------------------------------  396 (503)
T ss_pred             hhhccCcceecCCC------------------------------------------------------------------
Confidence             2223344444443                                                                  


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC--ccceeeecccccc--EEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE--KKSLARMTGHQQL--INCVEFSPDGRIIASASFDKSIKLWDGRIG  492 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~--~~~~~~~~~h~~~--v~~v~~sp~g~~las~s~dg~i~lwd~~~~  492 (573)
                                  +..++.-+.|+.+.++.+...  .....++.||.-+  -..+.|||||.+|++|+.||.+.+||.++-
T Consensus       397 ------------~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~  464 (503)
T KOG0282|consen  397 ------------GKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTT  464 (503)
T ss_pred             ------------CCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhh
Confidence                        334444444444444432211  0112234455432  346899999999999999999999999999


Q ss_pred             eEEEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEe
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWN  530 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd  530 (573)
                      +.+..+++|.+.+..+.|+|.. ..+|+++.||.|++|+
T Consensus       465 kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  465 KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            9999999999999999999964 4799999999999996

>KOG1063|consensus

Probab=100.00  E-value=1.4e-33  Score=270.85  Aligned_cols=441  Identities=24%  Similarity=0.413  Sum_probs=295.5

Q ss_pred             cccccCCCccccEEEEEEcCCCC---eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCc
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGR---SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNT  177 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~---~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (573)
                      +....+.||+|||.+++|...+.   +|||+|+|..||||.+.-+...-+.+          .+...        .....
T Consensus       182 ~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~----------~e~~~--------t~~~~  243 (764)
T KOG1063|consen  182 ARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNE----------REDSL--------TTLSN  243 (764)
T ss_pred             eEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccc----------ccccc--------ccccC
Confidence            34457889999999999986554   89999999999999985432110000          00000        00000


Q ss_pred             cceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE-------ecCCCC
Q psy2671         178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-------CEGHKH  250 (573)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~-------~~~h~~  250 (573)
                      .........-+  +++    .....+.||.+.|.++.|+|.+..|+++|+|.++.+|...+.+.+..       ..|...
T Consensus       244 ~~~f~~l~~i~--~~i----s~eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~  317 (764)
T KOG1063|consen  244 LPVFMILEEIQ--YRI----SFEALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAG  317 (764)
T ss_pred             CceeeeeeeEE--EEE----ehhhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeeccccccc
Confidence            00000000000  111    11234679999999999999999999999999999998776543332       234455


Q ss_pred             cEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc--eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK--QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      .....-|+|+++.+++-+..|-.++|......  .......||.+.|..+.|.|     .|++|++.|.|.+-|++..-.
T Consensus       318 GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~p-----sGeflLsvs~DQTTRlFa~wg  392 (764)
T KOG1063|consen  318 GFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDP-----SGEFLLSVSLDQTTRLFARWG  392 (764)
T ss_pred             ceeeEEEcCCCCEEEEecccCcEEEEeccCccceeeccccccccccceeeeecC-----CCCEEEEeccccceeeecccc
Confidence            68888999999999999999999999833211  12234679999999999987     578999999999999987652


Q ss_pred             Ce----EEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCee--eE-----eccCC-----cceeeEEEeccC
Q psy2671         329 SQ----CVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVM--CR-----TLEGH-----AHWVNTLALSTD  391 (573)
Q Consensus       329 ~~----~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~--~~-----~~~~~-----~~~v~~~~~s~~  391 (573)
                      .+    .+..-+-|...++|+++-+ +-.+++|.....+|+|+......  +.     ...+.     ..-|..+..|..
T Consensus       393 ~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnK  472 (764)
T KOG1063|consen  393 RQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNK  472 (764)
T ss_pred             cccceeeecccccccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCC
Confidence            21    2233345778899999876 55788888889999998753210  00     11111     111222333322


Q ss_pred             ceeEEEEcCCCce-----eeC----CCC----c--hhhhh------------hhhhhe-eeeCCCCcEEEEEeCCC----
Q psy2671         392 YLMRVEATSTGGF-----KYD----PAN----P--EESSK------------HALAKY-QAQCPEGEKLVSGSDDF----  439 (573)
Q Consensus       392 ~~~~~~~~~~~~~-----~~~----~~~----~--~~~~~------------~~~~~~-~~~~~~~~~l~sg~~dg----  439 (573)
                      .... .....+..     +..    |..    |  +....            |....+ .+.+|+|+.+|++....    
T Consensus       473 a~~~-~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~eh  551 (764)
T KOG1063|consen  473 AFFP-GETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEH  551 (764)
T ss_pred             CCcc-cccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccc
Confidence            2111 01111111     000    000    0  00000            001111 23468899999987543    


Q ss_pred             -eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe----EEEeecCCcceEEEEEECCCC
Q psy2671         440 -TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK----FITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       440 -~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~----~~~~~~~h~~~v~~v~~s~dg  514 (573)
                       .|++|+..+-.+ ...+.+|.-.|+.++|||||++|++.|.|+++.+|......    .....+.|...|+++.|+||+
T Consensus       552 AvI~lw~t~~W~~-~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde  630 (764)
T KOG1063|consen  552 AVIRLWNTANWLQ-VQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDE  630 (764)
T ss_pred             eEEEEEeccchhh-hheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCccc
Confidence             689999876544 34788999999999999999999999999999999864331    123467899999999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCcc--cccc--cccCcCCCEEEEEEccC-----CCEEEEeeCCCcEEEcc
Q psy2671         515 RLLVSGSADSTLKVWNMKTK--KIEQ--DLPGHGDEVYAVDWAPD-----GEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ~~las~s~D~~v~vwd~~~~--~~~~--~l~~h~~~v~~~~~s~d-----~~~l~s~~~d~~i~iw~  572 (573)
                      +++||+|.|.+|++|.....  +.+.  ....+...|++++|.|-     +..++.|-+.|.|.+|+
T Consensus       631 ~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~  697 (764)
T KOG1063|consen  631 KYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWR  697 (764)
T ss_pred             ceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEe
Confidence            99999999999999998776  3322  34568899999999873     22456677789999996

>KOG0278|consensus

Probab=100.00  E-value=6.6e-35  Score=246.78  Aligned_cols=289  Identities=26%  Similarity=0.411  Sum_probs=243.9

Q ss_pred             CCCccccEEEEEEc---CCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         106 MPGHAEAVISVKFS---PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       106 ~~gH~~~V~~l~~s---~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      -.||+.+|..++||   |+|-+|++++.|+.=.+-+-++|-                                       
T Consensus        10 c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgd---------------------------------------   50 (334)
T KOG0278|consen   10 CHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGD---------------------------------------   50 (334)
T ss_pred             EcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCC---------------------------------------
Confidence            35899999999998   589999999999876666555442                                       


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                      -+.++.||.+.|++.....+...-|+++.|-+-++||.-++..++.+ .|+.-|.+++|+.|.+
T Consensus        51 ----------------wigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~af~~ds~  113 (334)
T KOG0278|consen   51 ----------------WIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAVAFSQDSN  113 (334)
T ss_pred             ----------------cEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeEEecccch
Confidence                            12567899999999999999888999999999999999999888776 4788899999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +|++|+.+..++++|++..+.....+.+|...|..+-|..     ..+.+++++.|++||+||.+++..++.+.. ..+|
T Consensus       114 ~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-----eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s~V  187 (334)
T KOG0278|consen  114 YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-----EDKCILSSADDKTVRLWDHRTGTEVQSLEF-NSPV  187 (334)
T ss_pred             hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-----cCceEEeeccCCceEEEEeccCcEEEEEec-CCCC
Confidence            9999999999999999887666667889999999998864     345788889999999999999988887753 4578


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      +++..+.+|.+++....++|++||..+-..++.++                                             
T Consensus       188 tSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k---------------------------------------------  222 (334)
T KOG0278|consen  188 TSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYK---------------------------------------------  222 (334)
T ss_pred             cceeeccCCCEEEEecCceeEEeccccccceeecc---------------------------------------------
Confidence            88999999988888888889999876543322211                                             


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee-cCC
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL-RGH  501 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~-~~h  501 (573)
                                             +             .-.|.+...+|+-..+++|+.|..++.||..+++.+..+ ++|
T Consensus       223 -----------------------~-------------P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh  266 (334)
T KOG0278|consen  223 -----------------------M-------------PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGH  266 (334)
T ss_pred             -----------------------C-------------ccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCC
Confidence                                   0             123667778898899999999999999999999998886 899


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                      .++|.|+.|||||...|+||.||+|+||.+..++..
T Consensus       267 ~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  267 FGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             CCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence            999999999999999999999999999998766543

>KOG0277|consensus

Probab=100.00  E-value=1.1e-33  Score=240.09  Aligned_cols=278  Identities=26%  Similarity=0.489  Sum_probs=217.5

Q ss_pred             EEEEEcCC-CCeEEEE-------eCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEcCC-CCeEEEEeeCCeEEEEECC
Q psy2671         211 ISVKFSPN-GRSLASG-------SGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSPD-SKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       211 ~~~~fsp~-g~~las~-------s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s~d-g~~l~sgs~dg~i~vwd~~  279 (573)
                      .++.|||- ..+||.+       .+.|++.|-++.....+..+.  .-.+.+..++|++. .+.+++++.||++++||..
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~   91 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT   91 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence            47889993 2334333       257899999987555554443  34567899999985 4578999999999999965


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--cEEEEEe
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--GLIYSAS  357 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s  357 (573)
                      ........++.|+.+|.++.|++.    ..+.++++++|++|++|+....+.++++.+|...|...+|+|.  +.++++|
T Consensus        92 ~~s~Pi~~~kEH~~EV~Svdwn~~----~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S  167 (311)
T KOG0277|consen   92 MPSKPIHKFKEHKREVYSVDWNTV----RRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS  167 (311)
T ss_pred             CCCcchhHHHhhhhheEEeccccc----cceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence            544333567899999999999874    3456888899999999999988888999999888888888753  3444555


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      .|+++++|                                                                        
T Consensus       168 gd~~l~lw------------------------------------------------------------------------  175 (311)
T KOG0277|consen  168 GDGTLRLW------------------------------------------------------------------------  175 (311)
T ss_pred             CCceEEEE------------------------------------------------------------------------
Confidence            55555555                                                                        


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCe-EEEeecCCcceEEEEEECCCC-
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGK-FITTLRGHVQAVYMVAWSSDS-  514 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~-~~~~~~~h~~~v~~v~~s~dg-  514 (573)
                             |++...+.+. +..|...+.|+.|+. +...+++|+.|+.|+.||++..+ .+..+.+|.-.|..++|||.. 
T Consensus       176 -------dvr~~gk~~~-i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~  247 (311)
T KOG0277|consen  176 -------DVRSPGKFMS-IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHA  247 (311)
T ss_pred             -------EecCCCceeE-EEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchh
Confidence                   4444333333 566787899999987 56789999999999999998754 578889999999999999964 


Q ss_pred             CEEEEEeCCCcEEEEeCCcc-cccccccCcCCCEEEEEEcc-CCCEEEEeeCCCcEEEcc
Q psy2671         515 RLLVSGSADSTLKVWNMKTK-KIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ~~las~s~D~~v~vwd~~~~-~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d~~i~iw~  572 (573)
                      ..||+++.|-++||||...+ .++.+...|++.|..++||+ ++.++|++|.|+.+++|+
T Consensus       248 ~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~  307 (311)
T KOG0277|consen  248 SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN  307 (311)
T ss_pred             hHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence            57999999999999999744 45677788999999999998 467899999999999996

>KOG0645|consensus

Probab=100.00  E-value=1e-32  Score=236.49  Aligned_cols=242  Identities=32%  Similarity=0.603  Sum_probs=199.7

Q ss_pred             cCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCC---eeeEEe-cCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         201 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQ---TPLFKC-EGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~---~~~~~~-~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                      ..++||.+.++.++|+|- |..|||+|.|..||||+...+   .+...+ .+|+..|+++||+|.|++|++||.|.++.+
T Consensus         8 ~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~I   87 (312)
T KOG0645|consen    8 QKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVI   87 (312)
T ss_pred             EeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEE
Confidence            457899999999999998 999999999999999998852   222222 489999999999999999999999999999


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY  354 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~  354 (573)
                      |.-..+                                              ..+++.++.+|...|.|++|+.+| +|+
T Consensus        88 w~k~~~----------------------------------------------efecv~~lEGHEnEVK~Vaws~sG~~LA  121 (312)
T KOG0645|consen   88 WKKEDG----------------------------------------------EFECVATLEGHENEVKCVAWSASGNYLA  121 (312)
T ss_pred             eecCCC----------------------------------------------ceeEEeeeeccccceeEEEEcCCCCEEE
Confidence            953321                                              123466788999999999998776 677


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +++.|+++-+|....+.                                                               
T Consensus       122 TCSRDKSVWiWe~dedd---------------------------------------------------------------  138 (312)
T KOG0645|consen  122 TCSRDKSVWIWEIDEDD---------------------------------------------------------------  138 (312)
T ss_pred             EeeCCCeEEEEEecCCC---------------------------------------------------------------
Confidence            88888888887654221                                                               


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC---CCeEEEeecCCcceEEEEEEC
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR---IGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~---~~~~~~~~~~h~~~v~~v~~s  511 (573)
                                    .-.+...+.+|.+.|..+.|+|...+|+++|+|.+|++|+-.   ...+.+++.+|...|++++|.
T Consensus       139 --------------Efec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~  204 (312)
T KOG0645|consen  139 --------------EFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFD  204 (312)
T ss_pred             --------------cEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEec
Confidence                          112345577899999999999999999999999999999754   357889999999999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCccccccccc-CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLP-GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~-~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |.|..|++++.|++|+||...+     .++ -|..+++.+.|.  ...|+|++.|+.|++|.
T Consensus       205 ~~G~rl~s~sdD~tv~Iw~~~~-----~~~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~  259 (312)
T KOG0645|consen  205 NIGSRLVSCSDDGTVSIWRLYT-----DLSGMHSRALYDVPWD--NGVIASGGGDDAIRLFK  259 (312)
T ss_pred             CCCceEEEecCCcceEeeeecc-----CcchhcccceEeeeec--ccceEeccCCCEEEEEE
Confidence            9999999999999999998653     222 367899999998  45799999999999985

>KOG0292|consensus

Probab=100.00  E-value=1.4e-33  Score=277.35  Aligned_cols=305  Identities=25%  Similarity=0.421  Sum_probs=252.1

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      -+..|..++|+|...+++++-..|.|++||.+=+..+..+..|.++|+.++|+|+...++||+.|..|+||+..+.+++ 
T Consensus         8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrcl-   86 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCL-   86 (1202)
T ss_pred             ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceeh-
Confidence            4567899999999999999999999999999999999999999999999999999999999999999999999988776 


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKV  364 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~v  364 (573)
                      ..+.||-+.|..+.|++.     -..++++|.|.+||||+..+..++.++.+|+.-|.|..|.| ...++++|-|.+||+
T Consensus        87 ftL~GHlDYVRt~~FHhe-----yPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV  161 (1202)
T KOG0292|consen   87 FTLLGHLDYVRTVFFHHE-----YPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV  161 (1202)
T ss_pred             hhhccccceeEEeeccCC-----CceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence            468899999999998763     35899999999999999999999999999999999999998 568999999999999


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE---EEEeCCCeE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL---VSGSDDFTL  441 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~sg~~dg~i  441 (573)
                      ||+..-+....-.+          +.+..                                 +.+..+   .-|+.|-. 
T Consensus       162 WDisGLRkk~~~pg----------~~e~~---------------------------------~~~~~~~~dLfg~~DaV-  197 (1202)
T KOG0292|consen  162 WDISGLRKKNKAPG----------SLEDQ---------------------------------MRGQQGNSDLFGQTDAV-  197 (1202)
T ss_pred             EeecchhccCCCCC----------Cchhh---------------------------------hhccccchhhcCCcCee-
Confidence            99863211100000          00000                                 000000   11222222 


Q ss_pred             EEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--EEEeecCCcceEEEEEECCCCCEEEE
Q psy2671         442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSSDSRLLVS  519 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~--~~~~~~~h~~~v~~v~~s~dg~~las  519 (573)
                                ....+.||...|+.++|+|.-.+|+||+.|+.|++|.....+  .+.+++||.+.|.++-|+|...+++|
T Consensus       198 ----------VK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlS  267 (1202)
T KOG0292|consen  198 ----------VKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILS  267 (1202)
T ss_pred             ----------eeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEe
Confidence                      234567999999999999999999999999999999865443  35678999999999999999999999


Q ss_pred             EeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .|.|++|+|||+...+.++.++...++-+.++-+|..+.+|.| .|+-+.+|
T Consensus       268 nsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAg-HDsGm~VF  318 (1202)
T KOG0292|consen  268 NSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAG-HDSGMIVF  318 (1202)
T ss_pred             cCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeee-cCCceEEE
Confidence            9999999999999999999998888899999999998766655 45544444

>KOG1539|consensus

Probab=100.00  E-value=2.2e-32  Score=267.84  Aligned_cols=402  Identities=20%  Similarity=0.352  Sum_probs=299.6

Q ss_pred             cccEEEEEEcCCC--CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         110 AEAVISVKFSPNG--RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       110 ~~~V~~l~~s~~~--~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      .+.|+++ +||.-  +-++-|+.+|.++|||+.+++.+++                                        
T Consensus       159 ~~~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~----------------------------------------  197 (910)
T KOG1539|consen  159 GDFITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYT----------------------------------------  197 (910)
T ss_pred             CCceeeE-ecchhheeeEEEeecCCcEEEEEeccCcEEEE----------------------------------------
Confidence            3347776 67764  4588999999999999999876643                                        


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe-EEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ-LVS  266 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~-l~s  266 (573)
                                     ++++...|+++.=+|--..+|.|..+|+|.|++++.++.+..++...+.|++++|.-||.. +++
T Consensus       198 ---------------f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las  262 (910)
T KOG1539|consen  198 ---------------FQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLAS  262 (910)
T ss_pred             ---------------ecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEe
Confidence                           4567788999999998889999999999999999999999998877789999999999985 567


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC--C--eEEEEecCCCccE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL--S--QCVRVLTSHTRSV  342 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~--~--~~~~~~~~h~~~v  342 (573)
                      |+..|.+.+||++..+.+......|.+.|....|.|     ....+++++.|+.+++|=..+  +  +.++.-.||..+.
T Consensus       263 ~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-----~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp  337 (910)
T KOG1539|consen  263 GRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-----GEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPP  337 (910)
T ss_pred             ccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-----CCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCc
Confidence            777899999999988877666678888888777755     346799999999999885543  3  4456667999999


Q ss_pred             EEEEECCC-c-EEEEEeCCCeEEEEeCCCCeeeEec------------------cCCcceeeEEEeccC------ceeEE
Q psy2671         343 TCIRWGGS-G-LIYSASQDRTIKVWRASDGVMCRTL------------------EGHAHWVNTLALSTD------YLMRV  396 (573)
Q Consensus       343 ~~~~~~~~-~-~l~s~s~d~~i~vw~~~~~~~~~~~------------------~~~~~~v~~~~~s~~------~~~~~  396 (573)
                      .|++|.+. + .+.+++.|++++.+++....+.+.+                  .-.-.+|..+++...      ....+
T Consensus       338 ~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~  417 (910)
T KOG1539|consen  338 SCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITA  417 (910)
T ss_pred             hheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEE
Confidence            99999643 3 6999999999999876422111000                  000112333333221      11222


Q ss_pred             EEcCCCceeeCCCCchhh---------h-hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc--eeeeccccccEE
Q psy2671         397 EATSTGGFKYDPANPEES---------S-KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS--LARMTGHQQLIN  464 (573)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~--~~~~~~h~~~v~  464 (573)
                      .........|+..+....         . ........+.++.|+..+.|...|+|-+|+++++...  ...-..|..+|+
T Consensus       418 h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~  497 (910)
T KOG1539|consen  418 HKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVT  497 (910)
T ss_pred             ecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCcee
Confidence            221112222322221110         0 0011111233577999999999999999999876432  222357999999


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEeCCCCe-----------------------------------------EEEeecCCcc
Q psy2671         465 CVEFSPDGRIIASASFDKSIKLWDGRIGK-----------------------------------------FITTLRGHVQ  503 (573)
Q Consensus       465 ~v~~sp~g~~las~s~dg~i~lwd~~~~~-----------------------------------------~~~~~~~h~~  503 (573)
                      .++...-++.+++++.+|.+++||.....                                         .++.|.||..
T Consensus       498 gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~n  577 (910)
T KOG1539|consen  498 GLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGN  577 (910)
T ss_pred             EEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccc
Confidence            99999999999999999999999865432                                         1244678999


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC-CcEEEccC
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD-KVLRLWQN  573 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d-~~i~iw~~  573 (573)
                      .|++++|||||++|++++.|++||+||+.++.++-.+. -..+.+++.|||+|.+||++..| .-|++|.|
T Consensus       578 ritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsN  647 (910)
T KOG1539|consen  578 RITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSN  647 (910)
T ss_pred             ceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEc
Confidence            99999999999999999999999999999998865443 35688999999999999999999 56999975

>KOG0643|consensus

Probab=100.00  E-value=1.5e-32  Score=234.81  Aligned_cols=283  Identities=23%  Similarity=0.371  Sum_probs=216.9

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK  282 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~  282 (573)
                      +.||..+++.+.|+.+|.+|++++.|.++.+|--.+|+.+.++.||++.|.|++.+-+.+++++|+.|.++++||+++|+
T Consensus         6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk   85 (327)
T KOG0643|consen    6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGK   85 (327)
T ss_pred             cccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCc
Confidence            67999999999999999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             eecccccCCcccEEEEEecccccCCCCCEEEEE-----eCCCcEEEEECCC-------CeEEEEecCCCccEEEEEECCC
Q psy2671         283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-----GKDGAIRIWDVIL-------SQCVRVLTSHTRSVTCIRWGGS  350 (573)
Q Consensus       283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~  350 (573)
                      ++...  .....|..+.|.+     .+++++.+     +..+.|.++|++.       ..+...+..+...++.+-|+  
T Consensus        86 ~la~~--k~~~~Vk~~~F~~-----~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg--  156 (327)
T KOG0643|consen   86 QLATW--KTNSPVKRVDFSF-----GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWG--  156 (327)
T ss_pred             EEEEe--ecCCeeEEEeecc-----CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeec--
Confidence            87543  2234566666543     44444433     2334555665542       22233333333333333333  


Q ss_pred             cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         351 GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       351 ~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                                                                                                  |-++
T Consensus       157 ----------------------------------------------------------------------------~l~~  160 (327)
T KOG0643|consen  157 ----------------------------------------------------------------------------PLGE  160 (327)
T ss_pred             ----------------------------------------------------------------------------ccCC
Confidence                                                                                        4456


Q ss_pred             EEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW  510 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~  510 (573)
                      .|++|.+||.|..||.+++.........|...|+.+.|+||..+++++|.|.+.++||.++.+.++++... .+|++.++
T Consensus       161 ~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te-~PvN~aai  239 (327)
T KOG0643|consen  161 TIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTE-RPVNTAAI  239 (327)
T ss_pred             EEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeec-ccccceec
Confidence            66666666667777666655555555668888999999999999999999999999999999988888753 68999999


Q ss_pred             CCCCCEEEEEeCCCcEE--------------EEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         511 SSDSRLLVSGSADSTLK--------------VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       511 s~dg~~las~s~D~~v~--------------vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      +|-..+++-|+....--              +|++-..+.+..++||-++|++++|+|||+..+|||+||.||+.
T Consensus       240 sP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h  314 (327)
T KOG0643|consen  240 SPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH  314 (327)
T ss_pred             ccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence            99877777665433222              22222223456788999999999999999999999999999985

>KOG0277|consensus

Probab=100.00  E-value=4.7e-33  Score=236.30  Aligned_cols=243  Identities=28%  Similarity=0.536  Sum_probs=199.8

Q ss_pred             CCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCC-CeeeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCce
Q psy2671         207 AEAVISVKFSPN-GRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       207 ~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~-~~~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      .+.+..++|++. ...++++++||+++|||+.. ..|+..++.|+..|.++.|++ +++.++++|+|++|++|+...++.
T Consensus        60 ~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~S  139 (311)
T KOG0277|consen   60 EDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNS  139 (311)
T ss_pred             ccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcc
Confidence            567899999986 55788999999999999653 357888999999999999998 455678889999999999988776


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK  363 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~  363 (573)
                      + +.+.||...|+...|+|.    ..+.+++++.|+++++||++.......+..|...|.|+.|+..+            
T Consensus       140 v-~Tf~gh~~~Iy~a~~sp~----~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~------------  202 (311)
T KOG0277|consen  140 V-QTFNGHNSCIYQAAFSPH----IPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYN------------  202 (311)
T ss_pred             e-EeecCCccEEEEEecCCC----CCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccC------------
Confidence            6 458899999999999985    35689999999999999998765555688898888888886432            


Q ss_pred             EEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671         364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL  443 (573)
Q Consensus       364 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l  443 (573)
                                                                                       ...+++|+.|+.||.
T Consensus       203 -----------------------------------------------------------------~~vl~Tg~vd~~vr~  217 (311)
T KOG0277|consen  203 -----------------------------------------------------------------HNVLATGGVDNLVRG  217 (311)
T ss_pred             -----------------------------------------------------------------CcEEEecCCCceEEE
Confidence                                                                             234555555555555


Q ss_pred             EcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCC-eEEEeecCCcceEEEEEECC-CCCEEEEE
Q psy2671         444 WNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYMVAWSS-DSRLLVSG  520 (573)
Q Consensus       444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~~~v~~v~~s~-dg~~las~  520 (573)
                      ||+++-+.++..+.+|.-.|..|+|||. ..+||++++|-+++|||...+ ..+.+..-|...+..+.||+ ++.++|+.
T Consensus       218 wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~  297 (311)
T KOG0277|consen  218 WDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVAST  297 (311)
T ss_pred             EehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeec
Confidence            5555555667778899999999999995 568999999999999998754 45566677888999999997 56799999


Q ss_pred             eCCCcEEEEeC
Q psy2671         521 SADSTLKVWNM  531 (573)
Q Consensus       521 s~D~~v~vwd~  531 (573)
                      +.|..++||+.
T Consensus       298 gWDe~l~Vw~p  308 (311)
T KOG0277|consen  298 GWDELLYVWNP  308 (311)
T ss_pred             ccccceeeecc
Confidence            99999999984

>KOG0274|consensus

Probab=100.00  E-value=3.7e-32  Score=272.26  Aligned_cols=285  Identities=29%  Similarity=0.578  Sum_probs=252.7

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE-ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~-~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~  284 (573)
                      |...+.+..|.  +.++++++.|++|++||..++..+.. +.||.+.|.+++|..-+..|++|+.|.++++||..+|.+.
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~  284 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT  284 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE
Confidence            56678888888  45799999999999999999988887 9999999999999877789999999999999999999987


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEE
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKV  364 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~v  364 (573)
                       ..+.+|...|.++...+       ..+++|+.|.+|++|++.++.++.++.+|...|.++... .+.+++|+.|++|++
T Consensus       285 -~~l~gh~stv~~~~~~~-------~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~-~~~lvsgs~d~~v~V  355 (537)
T KOG0274|consen  285 -HSLQGHTSSVRCLTIDP-------FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD-EPLLVSGSYDGTVKV  355 (537)
T ss_pred             -EEecCCCceEEEEEccC-------ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec-CCEEEEEecCceEEE
Confidence             45779999999988654       357888999999999999999999999999999999998 668999999999999


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW  444 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw  444 (573)
                      |+..++++++++.||...|.++.+..                                     . ..+.+|+.|++|++|
T Consensus       356 W~~~~~~cl~sl~gH~~~V~sl~~~~-------------------------------------~-~~~~Sgs~D~~IkvW  397 (537)
T KOG0274|consen  356 WDPRTGKCLKSLSGHTGRVYSLIVDS-------------------------------------E-NRLLSGSLDTTIKVW  397 (537)
T ss_pred             EEhhhceeeeeecCCcceEEEEEecC-------------------------------------c-ceEEeeeeccceEee
Confidence            99999999999999999999886542                                     1 689999999999999


Q ss_pred             cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-CcceEEEEEECCCCCEEEEEeCC
Q psy2671         445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-h~~~v~~v~~s~dg~~las~s~D  523 (573)
                      |+++..+++..+.+|...+..+.+  .+++|++++.|++|++||..+++++.++.+ |...|+.+++.  ...+++++.|
T Consensus       398 dl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~  473 (537)
T KOG0274|consen  398 DLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDD  473 (537)
T ss_pred             cCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecC
Confidence            999875678888999988866654  467999999999999999999999999998 77899988877  4578889999


Q ss_pred             CcEEEEeCCcccccccccCc
Q psy2671         524 STLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       524 ~~v~vwd~~~~~~~~~l~~h  543 (573)
                      +++++||++++++.+.+-.+
T Consensus       474 ~~~~l~dl~~~~~~~~l~~~  493 (537)
T KOG0274|consen  474 GSVKLWDLRSGTLIRTLLST  493 (537)
T ss_pred             CeeEEEecccCchhhhhhhc
Confidence            99999999999988766433

>KOG0278|consensus

Probab=100.00  E-value=1.8e-33  Score=238.16  Aligned_cols=280  Identities=25%  Similarity=0.452  Sum_probs=239.8

Q ss_pred             CCCCCCcEEEEEEcC---CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         203 MPGHAEAVISVKFSP---NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp---~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      -.||+.+|-.++|||   +|-+|++++.|+.--+-+-.++.-+.++.||++.|.+...+.+..+.|+++.|=+.++||.-
T Consensus        10 c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~   89 (334)
T KOG0278|consen   10 CHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAV   89 (334)
T ss_pred             EcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhh
Confidence            359999999999985   89999999999999888888999999999999999999999888889999999999999999


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-EEEEecCCCccEEEEEEC-CCcEEEEEe
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTRSVTCIRWG-GSGLIYSAS  357 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~~-~~~~l~s~s  357 (573)
                      +|..+..  ..|+.-|.+++|..     +.++|++||.+..+|+||++..+ +...+.+|.+.|..+.|. .+..|++++
T Consensus        90 tgdelhs--f~hkhivk~~af~~-----ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSa  162 (334)
T KOG0278|consen   90 TGDELHS--FEHKHIVKAVAFSQ-----DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSA  162 (334)
T ss_pred             hhhhhhh--hhhhheeeeEEecc-----cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeec
Confidence            9876543  36788888888754     66889999999999999997654 455688999999999985 455788888


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      .|++||+||.++|..++++.                                                            
T Consensus       163 dd~tVRLWD~rTgt~v~sL~------------------------------------------------------------  182 (334)
T KOG0278|consen  163 DDKTVRLWDHRTGTEVQSLE------------------------------------------------------------  182 (334)
T ss_pred             cCCceEEEEeccCcEEEEEe------------------------------------------------------------
Confidence            88888888888776544332                                                            


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l  517 (573)
                                           -+..|+++.++++|++|.++ +.+.|++||..+...++..+.. ..|.+...+|+...+
T Consensus       183 ---------------------~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P-~nV~SASL~P~k~~f  239 (334)
T KOG0278|consen  183 ---------------------FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMP-CNVESASLHPKKEFF  239 (334)
T ss_pred             ---------------------cCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCc-cccccccccCCCceE
Confidence                                 12348889999999887655 5678999999998888776643 468888999999999


Q ss_pred             EEEeCCCcEEEEeCCcccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.|+.|..++.||..+++.+... ++|-++|.|+.|+|||..-++||.||+|+||.
T Consensus       240 VaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ  295 (334)
T KOG0278|consen  240 VAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ  295 (334)
T ss_pred             EecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence            99999999999999999887775 89999999999999999999999999999996

>KOG0300|consensus

Probab=100.00  E-value=1.3e-32  Score=240.68  Aligned_cols=294  Identities=27%  Similarity=0.469  Sum_probs=238.9

Q ss_pred             ccccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       100 ~~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      .++.+.|.||.+.|+.++.....+.+.|+|.|.+.+||.+++|.|+.                                 
T Consensus       138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~---------------------------------  184 (481)
T KOG0300|consen  138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLA---------------------------------  184 (481)
T ss_pred             EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccccee---------------------------------
Confidence            35567788999999999998888899999999999999999998763                                 


Q ss_pred             eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEEC------CC---------------
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV------TT---------------  238 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~------~~---------------  238 (573)
                                            +..||.+.|.|++|+|.+.+++++++|++..||..      ..               
T Consensus       185 ----------------------~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~  242 (481)
T KOG0300|consen  185 ----------------------TYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEH  242 (481)
T ss_pred             ----------------------eecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhc
Confidence                                  34589999999999999999999999999999961      00               


Q ss_pred             -------------------CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEE
Q psy2671         239 -------------------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS  299 (573)
Q Consensus       239 -------------------~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~  299 (573)
                                         ..|+..+.+|.+.|.+..|-..|++++++++|.+..+||+++|..+ ..+.||....+.++
T Consensus       243 sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v-~~LtGHd~ELtHcs  321 (481)
T KOG0300|consen  243 SDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVV-NILTGHDSELTHCS  321 (481)
T ss_pred             ccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCcee-ccccCcchhccccc
Confidence                               1256678899999999999999999999999999999999999765 67899999888887


Q ss_pred             ecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccC
Q psy2671         300 WEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG  378 (573)
Q Consensus       300 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~  378 (573)
                      -.|     ..+++++++.|.+.|+||.+.. +.+..+.+|+..|+++.|..+..+++|+.|.+|++||+++.        
T Consensus       322 tHp-----tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNM--------  388 (481)
T KOG0300|consen  322 THP-----TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNM--------  388 (481)
T ss_pred             cCC-----cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeeccc--------
Confidence            665     3467889999999999998743 45677889999999988887777777777777777776542        


Q ss_pred             CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       379 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                                                                                             +.++..+.-
T Consensus       389 -----------------------------------------------------------------------RsplATIRt  397 (481)
T KOG0300|consen  389 -----------------------------------------------------------------------RSPLATIRT  397 (481)
T ss_pred             -----------------------------------------------------------------------cCcceeeec
Confidence                                                                                   222222221


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE----eecCCcceEEEEEECCCCC--EEEEEeCCCcEEEEeCC
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT----TLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMK  532 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~----~~~~h~~~v~~v~~s~dg~--~las~s~D~~v~vwd~~  532 (573)
                       ..+++.++++..+..||.--.+..|++||+.-.++.+    .-++|...|+|++|+.+-.  -|.+++.|..+-=|++.
T Consensus       398 -dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in  476 (481)
T KOG0300|consen  398 -DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN  476 (481)
T ss_pred             -CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence             3457888888888899999999999999986443221    2358999999999996533  47799999999999986


Q ss_pred             cc
Q psy2671         533 TK  534 (573)
Q Consensus       533 ~~  534 (573)
                      ..
T Consensus       477 ~p  478 (481)
T KOG0300|consen  477 TP  478 (481)
T ss_pred             cc
Confidence            54

>KOG0275|consensus

Probab=100.00  E-value=3.6e-33  Score=244.72  Aligned_cols=292  Identities=24%  Similarity=0.411  Sum_probs=234.1

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      |...-+-|..|||||++|+|||.||.|.|||..+|+.-..                                   +-|+.
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKD-----------------------------------LkYQA  255 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKD-----------------------------------LKYQA  255 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhh-----------------------------------hhhhh
Confidence            5566788999999999999999999999999988753210                                   01111


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCCCeEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg~~l~s  266 (573)
                      +            ..+--|.++|.|+.||.|...||+|+.||.|++|.+.+|.++..+. .|+..|+|+.||.|+.++++
T Consensus       256 q------------d~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS  323 (508)
T KOG0275|consen  256 Q------------DNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILS  323 (508)
T ss_pred             h------------cceeecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhc
Confidence            1            1233478899999999999999999999999999999999998876 89999999999999999999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTC  344 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~  344 (573)
                      ++.|.++++--+.+|+.+ +.++||...|+...|.+     +|..+++++.||+|++|+..+.+|..++..  ..-+|..
T Consensus       324 ~sfD~tvRiHGlKSGK~L-KEfrGHsSyvn~a~ft~-----dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vns  397 (508)
T KOG0275|consen  324 ASFDQTVRIHGLKSGKCL-KEFRGHSSYVNEATFTD-----DGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNS  397 (508)
T ss_pred             ccccceEEEeccccchhH-HHhcCccccccceEEcC-----CCCeEEEecCCccEEEecCcchhhhhhccCCCCccccee
Confidence            999999999999999887 56899999999888754     788999999999999999999999887653  3445565


Q ss_pred             EEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         345 IRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       345 ~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      +..-|.+  .++.+...+++.+.++. |+.++++.                                             
T Consensus       398 v~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfs---------------------------------------------  431 (508)
T KOG0275|consen  398 VILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFS---------------------------------------------  431 (508)
T ss_pred             EEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeec---------------------------------------------
Confidence            5543332  45556666666555542 11111110                                             


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                               +++.       ..+..-+...||.|..+.+.+.|+.++.+...+|++-.++.-|.
T Consensus       432 -------------------------SGkR-------EgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhE  479 (508)
T KOG0275|consen  432 -------------------------SGKR-------EGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHE  479 (508)
T ss_pred             -------------------------cCCc-------cCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccc
Confidence                                     0000       01223456789999999999999999999999999999999999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ..+-.++-+|..++||+-+.||.+++|.
T Consensus       480 kdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  480 KDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             ccccccccCcccchhhhhcccchhhhcC
Confidence            9999999999999999999999999995

>KOG0275|consensus

Probab=100.00  E-value=7.4e-33  Score=242.81  Aligned_cols=284  Identities=25%  Similarity=0.407  Sum_probs=236.0

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe--------cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--------EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~--------~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vw  276 (573)
                      |...-+-|..|||||++|++||.||-|.+||..+|+....+        --+...|.|+.||.|...||+|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            45566789999999999999999999999999998754332        3467889999999999999999999999999


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYS  355 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s  355 (573)
                      .+++|.++...-++|...|+++.|+.     ++..+++++.|.++|+--+.++++++.+.+|+.-|+...|.++| .+++
T Consensus       291 ri~tG~ClRrFdrAHtkGvt~l~FSr-----D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iis  365 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKGVTCLSFSR-----DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIIS  365 (508)
T ss_pred             EEecchHHHHhhhhhccCeeEEEEcc-----CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEE
Confidence            99999999888889999999999865     55679999999999999999999999999999999999999887 7999


Q ss_pred             EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671         356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       356 ~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg  435 (573)
                      +|.||++++|+..++.++.+++.-.                                                       
T Consensus       366 aSsDgtvkvW~~KtteC~~Tfk~~~-------------------------------------------------------  390 (508)
T KOG0275|consen  366 ASSDGTVKVWHGKTTECLSTFKPLG-------------------------------------------------------  390 (508)
T ss_pred             ecCCccEEEecCcchhhhhhccCCC-------------------------------------------------------
Confidence            9999999999988876655543211                                                       


Q ss_pred             eCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEEEEEEC
Q psy2671         436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWS  511 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~~v~~s  511 (573)
                                             ...+|+++-.-| +-..++++-...+|.+.+.+ |+.++++..   ..+..-+.+.|
T Consensus       391 -----------------------~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lS  446 (508)
T KOG0275|consen  391 -----------------------TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILS  446 (508)
T ss_pred             -----------------------CcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEec
Confidence                                   112233443333 23355666666777777653 556665542   22345567789


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |.|.++...+.|+.++-|.+.+|++...+.-|...|..++-+|..+.||+-++||.+++|+
T Consensus       447 pkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  447 PKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             CCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            9999999999999999999999999999999999999999999999999999999999996

>KOG0300|consensus

Probab=100.00  E-value=6.4e-32  Score=236.30  Aligned_cols=319  Identities=22%  Similarity=0.384  Sum_probs=251.3

Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ...+.||.+.|+.++.......+.+++.|.+.+||.++++.++.++.||.+.|+|++|++.+..+++++.|++..+|...
T Consensus       141 vre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~a  220 (481)
T KOG0300|consen  141 VRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAA  220 (481)
T ss_pred             hhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHh
Confidence            35678999999999998888899999999999999999999999999999999999999999999999999999999732


Q ss_pred             CCceecc--cccCCccc--EEEEEecccccCCCCCEEEEE--eCC-CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-
Q psy2671         280 TGKQIGQ--PMRGHKQW--ITALSWEPFHLNHQCRRFASS--GKD-GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-  351 (573)
Q Consensus       280 ~~~~~~~--~~~~h~~~--v~~~~~~~~~~~~~~~~l~s~--~~d-g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-  351 (573)
                      -.-...+  ...+|...  +.+-        ........+  ..| .+||+       ++..+.+|...|.+..|-..+ 
T Consensus       221 v~~~vP~~~a~~~hSsEeE~e~s--------De~~~d~d~~~~sD~~tiRv-------Pl~~ltgH~~vV~a~dWL~gg~  285 (481)
T KOG0300|consen  221 VNWEVPSNNAPSDHSSEEEEEHS--------DEHNRDTDSSEKSDGHTIRV-------PLMRLTGHRAVVSACDWLAGGQ  285 (481)
T ss_pred             hcCcCCCCCCCCCCCchhhhhcc--------cccccccccccccCCceeee-------eeeeeeccccceEehhhhcCcc
Confidence            1111111  11222211  1000        000011111  112 23432       567788999999999996555 


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                      .++++++|++-.+||+++|..+..+.||.++.+..+.                                     +|...+
T Consensus       286 Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcst-------------------------------------HptQrL  328 (481)
T KOG0300|consen  286 QMVTASWDRTANLWDVETGEVVNILTGHDSELTHCST-------------------------------------HPTQRL  328 (481)
T ss_pred             eeeeeeccccceeeeeccCceeccccCcchhcccccc-------------------------------------CCcceE
Confidence            7999999999999999999999999999877654433                                     266778


Q ss_pred             EEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe-EEEeecCCcceEEEEEE
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK-FITTLRGHVQAVYMVAW  510 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~-~~~~~~~h~~~v~~v~~  510 (573)
                      +++.+.|-+.++||.+..-.....+.||.+.|+++.|..+. .+++|+.|.+|++||+++.+ .+.+++.. .+++.++.
T Consensus       329 VvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIRtd-S~~NRvav  406 (481)
T KOG0300|consen  329 VVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIRTD-SPANRVAV  406 (481)
T ss_pred             EEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceeecCCCceEEEeeeccccCcceeeecC-CccceeEe
Confidence            99999999999999997777788899999999999998765 57899999999999998764 45566543 57889999


Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCcccccc----cccCcCCCEEEEEEccCC--CEEEEeeCCCcEEEcc
Q psy2671         511 SSDSRLLVSGSADSTLKVWNMKTKKIEQ----DLPGHGDEVYAVDWAPDG--EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~~~~~~~~----~l~~h~~~v~~~~~s~d~--~~l~s~~~d~~i~iw~  572 (573)
                      +..++.+|.--.+..|++||++...+.+    .-.+|...|+|++|..+-  .-|+++|-|+.+.-|+
T Consensus       407 s~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~  474 (481)
T KOG0300|consen  407 SKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK  474 (481)
T ss_pred             ecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence            9888888888778889999998766533    345899999999998764  3589999999998886

>KOG0288|consensus

Probab=100.00  E-value=9.7e-33  Score=249.80  Aligned_cols=289  Identities=22%  Similarity=0.399  Sum_probs=228.7

Q ss_pred             ccccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       100 ~~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      .++...+..|...|..+.|-++...|+||+.|..|++|++..++.-                                  
T Consensus       165 S~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~----------------------------------  210 (459)
T KOG0288|consen  165 SRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSE----------------------------------  210 (459)
T ss_pred             hhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhh----------------------------------
Confidence            4555667789999999999999999999999999999998755311                                  


Q ss_pred             eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                         ...++.|-.++|+++.|.++++++++++.|+.+++|++.......++.||++.|+++.|..
T Consensus       211 -------------------~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~  271 (459)
T KOG0288|consen  211 -------------------LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKL  271 (459)
T ss_pred             -------------------hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhc
Confidence                               1245678889999999999999999999999999999999999999999999999999988


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ....+++|+.|.+|+.||+..+.+...++.                         ++.+..|                  
T Consensus       272 ~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-------------------------~S~cnDI------------------  308 (459)
T KOG0288|consen  272 SHSRVVSGSADRTIKLWDLQKAYCSKTVLP-------------------------GSQCNDI------------------  308 (459)
T ss_pred             cccceeeccccchhhhhhhhhhheeccccc-------------------------cccccce------------------
Confidence            777799999999999999876554432221                         1111110                  


Q ss_pred             ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       340 ~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                            ..+ ...+++|..|++||+||.+.+...                                              
T Consensus       309 ------~~~-~~~~~SgH~DkkvRfwD~Rs~~~~----------------------------------------------  335 (459)
T KOG0288|consen  309 ------VCS-ISDVISGHFDKKVRFWDIRSADKT----------------------------------------------  335 (459)
T ss_pred             ------Eec-ceeeeecccccceEEEeccCCcee----------------------------------------------
Confidence                  000 112345555555666655433221                                              


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                        ..+..+ +.|+++..+++|..|.+++.|.++.+.|+++.+....+.
T Consensus       336 ----------------------------------~sv~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~s  380 (459)
T KOG0288|consen  336 ----------------------------------RSVPLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFS  380 (459)
T ss_pred             ----------------------------------eEeecC-cceeeEeeccCCeEEeeecCCCceeeeecccccEEEEee
Confidence                                              112222 368999999999999999999999999999988777765


Q ss_pred             CC----cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC--CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         500 GH----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD--EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       500 ~h----~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~--~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.    ....+.+.|||++.|+|+||.||.|+||++.++++...+.....  .|++++|+|.|..|++++.++.+.+|.
T Consensus       381 A~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  381 AEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             ccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            42    12367899999999999999999999999999999887766554  499999999999999999999999995

>KOG0274|consensus

Probab=100.00  E-value=3.1e-31  Score=265.64  Aligned_cols=283  Identities=30%  Similarity=0.520  Sum_probs=244.3

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      |...+.+..|+  +.++++++.|+++++||..++..+                                           
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i-------------------------------------------  241 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLI-------------------------------------------  241 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEE-------------------------------------------
Confidence            67788899987  678999999999999998776432                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                 ...+.||.+.|++++|..-+..|++|+.|.++++||..++.+...+.+|...|.++..-  ..++++|+
T Consensus       242 -----------~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs  308 (537)
T KOG0274|consen  242 -----------LTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGS  308 (537)
T ss_pred             -----------EeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeecc
Confidence                       12367999999999998778899999999999999999999999999999999999874  45788899


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~  348 (573)
                      .|.+|++|++++++.+ ..+.+|...|.++...       +.++++|+.|++|++||+.++++++.+.+|+..|.++.+.
T Consensus       309 ~D~tVkVW~v~n~~~l-~l~~~h~~~V~~v~~~-------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~  380 (537)
T KOG0274|consen  309 RDNTVKVWDVTNGACL-NLLRGHTGPVNCVQLD-------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVD  380 (537)
T ss_pred             CCceEEEEeccCcceE-EEeccccccEEEEEec-------CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEec
Confidence            9999999999988876 4566799999999853       5689999999999999999999999999999999999887


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      +...+++|+.|++|++||+++. ++..++.+|..-+..+.                                       .
T Consensus       381 ~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~---------------------------------------~  421 (537)
T KOG0274|consen  381 SENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLL---------------------------------------L  421 (537)
T ss_pred             CcceEEeeeeccceEeecCCchhhhhhhhcCCcccccccc---------------------------------------c
Confidence            7678999999999999999999 88999999987664433                                       2


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      .++.|++++.|++|++||...+. .+..+.+ |...|.++++.  ...+++++.||++++||++++++.+.+-
T Consensus       422 ~~~~Lvs~~aD~~Ik~WD~~~~~-~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~  491 (537)
T KOG0274|consen  422 RDNFLVSSSADGTIKLWDAEEGE-CLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLL  491 (537)
T ss_pred             ccceeEeccccccEEEeecccCc-eeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhhh
Confidence            36789999999999999987654 4555666 66778888876  4578899999999999999998887663

>KOG0643|consensus

Probab=100.00  E-value=1.5e-31  Score=228.76  Aligned_cols=286  Identities=19%  Similarity=0.311  Sum_probs=221.4

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .|+||+.+++-++++.+|.+|.|++.|.+..||=..+|+.+                                       
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerl---------------------------------------   45 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERL---------------------------------------   45 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCcee---------------------------------------
Confidence            47799999999999999999999999999999977666433                                       


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                      .+..||++.|+|+...-+.+++++|+.|+++++||+.+|+.++.++- ...|..+.|+++|+++
T Consensus        46 ----------------Gty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~-~~~Vk~~~F~~~gn~~  108 (327)
T KOG0643|consen   46 ----------------GTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKT-NSPVKRVDFSFGGNLI  108 (327)
T ss_pred             ----------------eeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeec-CCeeEEEeeccCCcEE
Confidence                            34569999999999999999999999999999999999999988764 4579999999999977


Q ss_pred             EEEeeC-----CeEEEEECCCCc-------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-E
Q psy2671         265 VSGCKN-----GVIHAWDSSTGK-------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-C  331 (573)
Q Consensus       265 ~sgs~d-----g~i~vwd~~~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~  331 (573)
                      +....+     +.|.++|++...       +. ..+..+...++..-|.|     .++.+++|..||.|.+||..++. .
T Consensus       109 l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~-~kI~t~~skit~a~Wg~-----l~~~ii~Ghe~G~is~~da~~g~~~  182 (327)
T KOG0643|consen  109 LASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY-LKIPTPDSKITSALWGP-----LGETIIAGHEDGSISIYDARTGKEL  182 (327)
T ss_pred             EEEehhhcCcceEEEEEEccCChhhhcccCce-EEecCCccceeeeeecc-----cCCEEEEecCCCcEEEEEcccCcee
Confidence            665543     679999987432       11 12334557788888877     45789999999999999999974 4


Q ss_pred             EEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       332 ~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      +.....|...|+.+.++++. +++++|.|.+-++||..+-..++++.-                                
T Consensus       183 v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--------------------------------  230 (327)
T KOG0643|consen  183 VDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--------------------------------  230 (327)
T ss_pred             eechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee--------------------------------
Confidence            45557899999999998876 678888888888888776554443321                                


Q ss_pred             chhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc-------
Q psy2671         411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS-------  483 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~-------  483 (573)
                                                                       ..+|++.+++|-...++.|+....       
T Consensus       231 -------------------------------------------------e~PvN~aaisP~~d~VilgGGqeA~dVTTT~  261 (327)
T KOG0643|consen  231 -------------------------------------------------ERPVNTAAISPLLDHVILGGGQEAMDVTTTS  261 (327)
T ss_pred             -------------------------------------------------cccccceecccccceEEecCCceeeeeeeec
Confidence                                                             234666666665444444332111       


Q ss_pred             -------EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         484 -------IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       484 -------i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                             .++|++-..+.+...++|-++|++++|+|||+..++|+.||.||+.-...
T Consensus       262 ~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~  318 (327)
T KOG0643|consen  262 TRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS  318 (327)
T ss_pred             ccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence                   12233222345667889999999999999999999999999999986543

>KOG0640|consensus

Probab=100.00  E-value=6.1e-31  Score=229.54  Aligned_cols=316  Identities=25%  Similarity=0.415  Sum_probs=234.7

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      ..+..+..|..++.+.+|||||.++||||.|..|+|.|++..  +.+.+  +       .+       +     ...   
T Consensus       103 yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildverm--laks~--~-------~e-------m-----~~~---  156 (430)
T KOG0640|consen  103 YETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERM--LAKSK--P-------KE-------M-----ISG---  156 (430)
T ss_pred             cceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhh--hhhcc--h-------hh-------h-----ccC---
Confidence            344567789999999999999999999999999999998732  11000  0       00       0     000   


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee--EEecCCCCcEEEEEEc
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWS  258 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~s  258 (573)
                           ..+.      .-....++..|.+.|+++.|+|....|++|+.|++|+++|+......  +..-.....|+++.|+
T Consensus       157 -----~~qa------~hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfH  225 (430)
T KOG0640|consen  157 -----DTQA------RHPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFH  225 (430)
T ss_pred             -----Cccc------CCceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeec
Confidence                 0000      00123467789999999999999999999999999999998753322  1222334579999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  336 (573)
                      |.|.+|+.|....++++||+++-++..  .+-.+|++.|+++.+++     .++..++++.||.|++||-.+++|+.++.
T Consensus       226 PsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-----t~~lYvTaSkDG~IklwDGVS~rCv~t~~  300 (430)
T KOG0640|consen  226 PSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-----TGSLYVTASKDGAIKLWDGVSNRCVRTIG  300 (430)
T ss_pred             CCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecC-----CccEEEEeccCCcEEeeccccHHHHHHHH
Confidence            999999999999999999999877643  35568999999998865     67899999999999999999999998875


Q ss_pred             -CCC-ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         337 -SHT-RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       337 -~h~-~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                       .|. ..|++..|..++ .+++.+.|..+++|.+.+|.++..+.|-...                   +....       
T Consensus       301 ~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~t-------------------grq~~-------  354 (430)
T KOG0640|consen  301 NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTT-------------------GRQKH-------  354 (430)
T ss_pred             hhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcc-------------------cchhh-------
Confidence             454 468888898887 6899999999999999999998887654210                   00000       


Q ss_pred             hhhhhhhheeeeCCCCcEEEE-EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         414 SSKHALAKYQAQCPEGEKLVS-GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~l~s-g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                         ...+.   +.-...+++. --..+.+.-||.++..+....-.+|++.+.++.-||.+.-+.++|.|..+++|--+
T Consensus       355 ---rtqAv---FNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr  426 (430)
T KOG0640|consen  355 ---RTQAV---FNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR  426 (430)
T ss_pred             ---hhhhh---hcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence               00000   0011122222 22345788899888766555567999999999999999999999999999999643

>KOG0301|consensus

Probab=100.00  E-value=5.2e-31  Score=253.39  Aligned_cols=280  Identities=27%  Similarity=0.470  Sum_probs=238.1

Q ss_pred             eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec-ccccCCcccEEE-EEecccccCCCCCEEEEEeC
Q psy2671         240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITA-LSWEPFHLNHQCRRFASSGK  317 (573)
Q Consensus       240 ~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~-~~~~~~~~~~~~~~l~s~~~  317 (573)
                      +.-+.+.||...|..+++.+.. .++++|+||++++|+......+. ..+.+|.+.|.. ++|.+    .+..++++|+.
T Consensus         5 ~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e----~~~~~l~~g~~   79 (745)
T KOG0301|consen    5 KLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAE----SDKGRLVVGGM   79 (745)
T ss_pred             eeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceecc----ccCcceEeecc
Confidence            3456788999999999987554 79999999999999986655443 456678887776 77654    24557999999


Q ss_pred             CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      |.++.+|......+..++.+|...|+|+....++.+++||+|.++++|..  +++...+++|+..|.+++.-        
T Consensus        80 D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l--------  149 (745)
T KOG0301|consen   80 DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASL--------  149 (745)
T ss_pred             cceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCcchheeeeeec--------
Confidence            99999999999999999999999999999888888999999999999975  45556699999988876643        


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS  477 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las  477 (573)
                                                   |++ .+++|+.|++|++|.-   ...+..+.+|++.|+.+++-|++ .+++
T Consensus       150 -----------------------------~e~-~~vTgsaDKtIklWk~---~~~l~tf~gHtD~VRgL~vl~~~-~flS  195 (745)
T KOG0301|consen  150 -----------------------------PEN-TYVTGSADKTIKLWKG---GTLLKTFSGHTDCVRGLAVLDDS-HFLS  195 (745)
T ss_pred             -----------------------------CCC-cEEeccCcceeeeccC---CchhhhhccchhheeeeEEecCC-CeEe
Confidence                                         333 7899999999999984   45677899999999999999875 5678


Q ss_pred             eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCC
Q psy2671         478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       478 ~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~  557 (573)
                      ++.||.|++|+. +|+.+....||..-|++++..++++.+++++.|++++||+..  ++.+.+.-.+-.|+++.+-++|.
T Consensus       196 csNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD  272 (745)
T KOG0301|consen  196 CSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD  272 (745)
T ss_pred             ecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC
Confidence            999999999998 789999999999999999988889999999999999999876  66666664455899999988876


Q ss_pred             EEEEeeCCCcEEEcc
Q psy2671         558 KVASGGKDKVLRLWQ  572 (573)
Q Consensus       558 ~l~s~~~d~~i~iw~  572 (573)
                       |++|+.||.||+|.
T Consensus       273 -Ivvg~SDG~VrVfT  286 (745)
T KOG0301|consen  273 -IVVGGSDGRVRVFT  286 (745)
T ss_pred             -EEEeccCceEEEEE
Confidence             78899999999995

>KOG0316|consensus

Probab=100.00  E-value=6.8e-31  Score=220.66  Aligned_cols=240  Identities=21%  Similarity=0.390  Sum_probs=211.5

Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEE
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW  365 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw  365 (573)
                      .+..+++.|.++.|+.     +|++.+++|.|.+||+|+...+.++++..+|...|..++.+.++ .+++|+.|+.+.+|
T Consensus        12 ~l~~~qgaV~avryN~-----dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vw   86 (307)
T KOG0316|consen   12 ILDCAQGAVRAVRYNV-----DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVW   86 (307)
T ss_pred             eecccccceEEEEEcc-----CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEE
Confidence            4567888999998764     78999999999999999999999999999999999999987665 79999999999999


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      |+++|+..+.+.+|...|+.+.++.+                                     ...+++|+.|.++++||
T Consensus        87 DV~TGkv~Rr~rgH~aqVNtV~fNee-------------------------------------sSVv~SgsfD~s~r~wD  129 (307)
T KOG0316|consen   87 DVNTGKVDRRFRGHLAQVNTVRFNEE-------------------------------------SSVVASGSFDSSVRLWD  129 (307)
T ss_pred             EcccCeeeeecccccceeeEEEecCc-------------------------------------ceEEEeccccceeEEEE
Confidence            99999999999999999999998743                                     56899999999999999


Q ss_pred             CCCCc-cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671         446 PEKEK-KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       446 ~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      .++.. .++..+....+.|.++..+  +..|++||.||+++.||++.|......-+|  +|+++.||+|++.++.++.|+
T Consensus       130 CRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~s  205 (307)
T KOG0316|consen  130 CRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDS  205 (307)
T ss_pred             cccCCCCccchhhhhcCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccc
Confidence            87653 4455566666778888876  468999999999999999999877766665  799999999999999999999


Q ss_pred             cEEEEeCCcccccccccCcCCCEEEE--EEccCCCEEEEeeCCCcEEEcc
Q psy2671         525 TLKVWNMKTKKIEQDLPGHGDEVYAV--DWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       525 ~v~vwd~~~~~~~~~l~~h~~~v~~~--~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++-|-.++++++.++||...=+.+  .++.....+++||+||.|++|+
T Consensus       206 tlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wd  255 (307)
T KOG0316|consen  206 TLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWD  255 (307)
T ss_pred             eeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEE
Confidence            99999999999999999998765544  5566677899999999999997

>KOG1446|consensus

Probab=100.00  E-value=1.5e-29  Score=222.47  Aligned_cols=279  Identities=25%  Similarity=0.386  Sum_probs=221.4

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCc
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGK  282 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~  282 (573)
                      .-.+.|.++.|+++|.+|++++.|.+++|||..+++.+..+..++..|..+.|......++.++.  |.+|+..++.+.+
T Consensus        12 ~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk   91 (311)
T KOG1446|consen   12 ETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK   91 (311)
T ss_pred             cCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCc
Confidence            34678999999999999999999999999999999999998888888999999877777777776  8899999999988


Q ss_pred             eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC-Ce
Q psy2671         283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD-RT  361 (573)
Q Consensus       283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d-~~  361 (573)
                      .+ +.+.||+..|..++..|.     ++.+++++.|++||+||++..++.-.+...  .-..+++.|.|.+++.+.. ..
T Consensus        92 yl-RYF~GH~~~V~sL~~sP~-----~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~--~~pi~AfDp~GLifA~~~~~~~  163 (311)
T KOG1446|consen   92 YL-RYFPGHKKRVNSLSVSPK-----DDTFLSSSLDKTVRLWDLRVKKCQGLLNLS--GRPIAAFDPEGLIFALANGSEL  163 (311)
T ss_pred             eE-EEcCCCCceEEEEEecCC-----CCeEEecccCCeEEeeEecCCCCceEEecC--CCcceeECCCCcEEEEecCCCe
Confidence            77 568999999999998874     468999999999999999876665444322  2234566666654443333 36


Q ss_pred             EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671         362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL  441 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  441 (573)
                      |++||++.-.                                                                      
T Consensus       164 IkLyD~Rs~d----------------------------------------------------------------------  173 (311)
T KOG1446|consen  164 IKLYDLRSFD----------------------------------------------------------------------  173 (311)
T ss_pred             EEEEEecccC----------------------------------------------------------------------
Confidence            6666654210                                                                      


Q ss_pred             EEEcCCCCccceeee---ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE---EEEEECCCCC
Q psy2671         442 FLWNPEKEKKSLARM---TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV---YMVAWSSDSR  515 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~---~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v---~~v~~s~dg~  515 (573)
                              +.+...+   .+.....+.|.|||||+.|+.+...+.+++.|.-+|..+.++.++...-   ....|+|||+
T Consensus       174 --------kgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~  245 (311)
T KOG1446|consen  174 --------KGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK  245 (311)
T ss_pred             --------CCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCc
Confidence                    0111110   1223457889999999999999999999999999999988888775433   5778999999


Q ss_pred             EEEEEeCCCcEEEEeCCcccccccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         516 LLVSGSADSTLKVWNMKTKKIEQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~~~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      ++++|+.||+|.+|++++++.+..+.+ +.+++.++.|+|.--+++|+  +..+-+|
T Consensus       246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw  300 (311)
T KOG1446|consen  246 FVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFW  300 (311)
T ss_pred             EEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEE
Confidence            999999999999999999999988888 78899999999976666655  5557777

>KOG1407|consensus

Probab=100.00  E-value=5.6e-30  Score=218.54  Aligned_cols=278  Identities=26%  Similarity=0.410  Sum_probs=216.0

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +.+.+|...|.+|+|+.+|..||+|+.|++++||+++..+...+                                    
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~------------------------------------   57 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKE------------------------------------   57 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhh------------------------------------
Confidence            45678999999999999999999999999999999986532211                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                       -...||.+.|-.++|+| ....++++++|.+|++||.+.+++.......... .-+.|+|+|.
T Consensus        58 -----------------~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~en-i~i~wsp~g~  119 (313)
T KOG1407|consen   58 -----------------LVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGEN-INITWSPDGE  119 (313)
T ss_pred             -----------------hcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCcc-eEEEEcCCCC
Confidence                             12458999999999987 4668999999999999999999998776544444 3478999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +++.++.|..|...|.++.+....  ....-.+..++|.-     ++..|......|+|.|.....-+++..+..|....
T Consensus       120 ~~~~~~kdD~it~id~r~~~~~~~--~~~~~e~ne~~w~~-----~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snC  192 (313)
T KOG1407|consen  120 YIAVGNKDDRITFIDARTYKIVNE--EQFKFEVNEISWNN-----SNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNC  192 (313)
T ss_pred             EEEEecCcccEEEEEecccceeeh--hcccceeeeeeecC-----CCCEEEEecCCceEEEEeccccccccccccCCcce
Confidence            999999999999999887654321  12234456666651     33455545556889998888888888888888877


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .|+.|+|+| .+++|+.|..+.+||+.+-                                                   
T Consensus       193 icI~f~p~GryfA~GsADAlvSLWD~~EL---------------------------------------------------  221 (313)
T KOG1407|consen  193 ICIEFDPDGRYFATGSADALVSLWDVDEL---------------------------------------------------  221 (313)
T ss_pred             EEEEECCCCceEeeccccceeeccChhHh---------------------------------------------------
Confidence            777777655 4555555555555554322                                                   


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                                                   .+.+.+.-+.-+|..+.||-||++||+||.|..|-|=++.+|..+..++ +
T Consensus       222 -----------------------------iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~  271 (313)
T KOG1407|consen  222 -----------------------------ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-C  271 (313)
T ss_pred             -----------------------------hhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-c
Confidence                                         2233344456779999999999999999999999999999999888876 5


Q ss_pred             cceEEEEEECCCCCEEEEEeCC
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D  523 (573)
                      .++.+.++|+|...+||-++.|
T Consensus       272 ~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  272 EGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             cCCceeEEecCCCceeeEEecC
Confidence            5788999999999999988765

>KOG1407|consensus

Probab=99.98  E-value=4.9e-30  Score=218.90  Aligned_cols=283  Identities=23%  Similarity=0.393  Sum_probs=230.6

Q ss_pred             EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       244 ~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      ..++|.+.|.+|+|+.+|..|++|+.|+++.+|+++..+.. ....++|.+.|..++|.|.+    ...|++++.|.+||
T Consensus        15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~----~d~~atas~dk~ir   90 (313)
T KOG1407|consen   15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH----PDLFATASGDKTIR   90 (313)
T ss_pred             HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC----CcceEEecCCceEE
Confidence            45688999999999999999999999999999999877443 23467999999999998854    35799999999999


Q ss_pred             EEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         323 IWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       323 iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      +||++.+++........+.+. +.|+|+ +.++.++.|..|.+.|.++.+.....+- ..+++.++++            
T Consensus        91 ~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~-~~e~ne~~w~------------  156 (313)
T KOG1407|consen   91 IWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQF-KFEVNEISWN------------  156 (313)
T ss_pred             EEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcc-cceeeeeeec------------
Confidence            999999999888766555555 445554 5899999999999999887655433321 1223333332            


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                                               .++.+++....-|+|.|..... .+++..+..|+....||.|+|+|+++|+|+.|
T Consensus       157 -------------------------~~nd~Fflt~GlG~v~ILsyps-Lkpv~si~AH~snCicI~f~p~GryfA~GsAD  210 (313)
T KOG1407|consen  157 -------------------------NSNDLFFLTNGLGCVEILSYPS-LKPVQSIKAHPSNCICIEFDPDGRYFATGSAD  210 (313)
T ss_pred             -------------------------CCCCEEEEecCCceEEEEeccc-cccccccccCCcceEEEEECCCCceEeecccc
Confidence                                     2345666666678888877653 45577788999999999999999999999999


Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      -.+.+||+...-+++.+..+.-+|..+.||.||++||+||.|..|-|=++++|..+..++ +.++.+.++|+|....||-
T Consensus       211 AlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAy  289 (313)
T KOG1407|consen  211 ALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAY  289 (313)
T ss_pred             ceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeE
Confidence            999999999888888888888899999999999999999999999999999999888776 6789999999999888887


Q ss_pred             eeCC---------CcEEEc
Q psy2671         562 GGKD---------KVLRLW  571 (573)
Q Consensus       562 ~~~d---------~~i~iw  571 (573)
                      +..|         |++++|
T Consensus       290 A~ddk~~d~~reag~vKiF  308 (313)
T KOG1407|consen  290 ACDDKDGDSNREAGTVKIF  308 (313)
T ss_pred             EecCCCCccccccceeEEe
Confidence            7654         467766

>KOG0299|consensus

Probab=99.98  E-value=2.8e-30  Score=237.26  Aligned_cols=311  Identities=23%  Similarity=0.414  Sum_probs=233.9

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcce-eeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..+..|.-+|.||+++|++.+..+++.|++|.=|++.++... +..+.                           .++..
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~---------------------------~ev~k  188 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIER---------------------------DEVLK  188 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCccccccccc---------------------------chhhh
Confidence            455679999999999999999999999999999999988643 11100                           00000


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                      ..+.        +. + ... .+|...+.+++.||||++||+|+.|..|.||+..+.+.+..+.+|.+.|.+++|-....
T Consensus       189 ~~~~--------~~-k-~~r-~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~  257 (479)
T KOG0299|consen  189 SHGN--------PL-K-ESR-KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTS  257 (479)
T ss_pred             hccC--------CC-C-ccc-ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCcc
Confidence            0000        00 0 011 38999999999999999999999999999999999999999999999999999988888


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      .|++++.|..|++|+++.-..+ ..+.||.+.|.++....     ..+.+..|+.|+++|+|++.. ....++.+|.+.+
T Consensus       258 ~lys~s~Drsvkvw~~~~~s~v-etlyGHqd~v~~IdaL~-----reR~vtVGgrDrT~rlwKi~e-esqlifrg~~~si  330 (479)
T KOG0299|consen  258 ELYSASADRSVKVWSIDQLSYV-ETLYGHQDGVLGIDALS-----RERCVTVGGRDRTVRLWKIPE-ESQLIFRGGEGSI  330 (479)
T ss_pred             ceeeeecCCceEEEehhHhHHH-HHHhCCccceeeechhc-----ccceEEeccccceeEEEeccc-cceeeeeCCCCCe
Confidence            9999999999999998765443 56789999998886432     234444556999999999943 3334567889999


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .|++|-.+..+++||.+|.|.+|++..-+++.+.. .|..                                        
T Consensus       331 dcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv----------------------------------------  370 (479)
T KOG0299|consen  331 DCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGV----------------------------------------  370 (479)
T ss_pred             eeEEEecccceeeccCCceEEEeeecccCceeEeeccccc----------------------------------------
Confidence            99999988899999999999999986554432211 1100                                        


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC----eEEEe
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG----KFITT  497 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~----~~~~~  497 (573)
                          .|..                         ....++..|++|+..|...++|+|+.+|.|++|-+..+    .++..
T Consensus       371 ----~~~~-------------------------~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~  421 (479)
T KOG0299|consen  371 ----IPEL-------------------------DPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYS  421 (479)
T ss_pred             ----cCCc-------------------------cccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeee
Confidence                0000                         01123357999999999999999999999999988776    34455


Q ss_pred             ecCCcceEEEEEECCCCCEEEEE-eCCCcEEEE
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSG-SADSTLKVW  529 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~-s~D~~v~vw  529 (573)
                      +. -.+.|++++|+++|+++++| +....+==|
T Consensus       422 ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW  453 (479)
T KOG0299|consen  422 LS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRW  453 (479)
T ss_pred             cc-cccEEEEEEEccCCCEEEEeccccccccee
Confidence            54 45789999999999966555 444444334

>KOG0973|consensus

Probab=99.98  E-value=2e-30  Score=262.45  Aligned_cols=303  Identities=25%  Similarity=0.437  Sum_probs=229.5

Q ss_pred             CCCcc-ccEEEEEEcCCCCeeEEee--CCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         106 MPGHA-EAVISVKFSPNGRSLASGS--GDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       106 ~~gH~-~~V~~l~~s~~~~~lat~s--~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      +-+|. ..|.+++.||||..+|||+  .|+.++||+.+.=   ...                          .....   
T Consensus         8 wv~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~v---l~~--------------------------~~~~~---   55 (942)
T KOG0973|consen    8 WVNHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPV---LDE--------------------------KEEKN---   55 (942)
T ss_pred             ccccCCeeEEEEEecCCceeEecCCccccccceeeccccc---cch--------------------------hhhhh---
Confidence            33454 4799999999999999999  8999999987521   000                          00000   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-------C-----------eeeEE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-------Q-----------TPLFK  244 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-------~-----------~~~~~  244 (573)
                                 ....+...++..|.+.|.|+.|+|||++||+||.|+.|.||+...       +           +.+..
T Consensus        56 -----------~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~  124 (942)
T KOG0973|consen   56 -----------ENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSI  124 (942)
T ss_pred             -----------cccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEE
Confidence                       001122345678999999999999999999999999999999772       1           24567


Q ss_pred             ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEE
Q psy2671         245 CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW  324 (573)
Q Consensus       245 ~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iw  324 (573)
                      +.+|...|..++|+|++.+|++++.|++|.+|+..+.+. ...+.+|...|.++.|.|     -|++|++-+.|++|++|
T Consensus       125 l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~-~~vl~~H~s~VKGvs~DP-----~Gky~ASqsdDrtikvw  198 (942)
T KOG0973|consen  125 LRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFEL-LKVLRGHQSLVKGVSWDP-----IGKYFASQSDDRTLKVW  198 (942)
T ss_pred             EecCCCccceeccCCCccEEEEecccceEEEEcccccee-eeeeecccccccceEECC-----ccCeeeeecCCceEEEE
Confidence            889999999999999999999999999999999999844 467899999999999988     46788888888888888


Q ss_pred             ECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       325 d~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      .+..-...+.+..+...                                                               
T Consensus       199 rt~dw~i~k~It~pf~~---------------------------------------------------------------  215 (942)
T KOG0973|consen  199 RTSDWGIEKSITKPFEE---------------------------------------------------------------  215 (942)
T ss_pred             EcccceeeEeeccchhh---------------------------------------------------------------
Confidence            75432222222111000                                                               


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee----C
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS----F  480 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s----~  480 (573)
                                           ++                               -...+..+.|||||++|++.-    .
T Consensus       216 ---------------------~~-------------------------------~~T~f~RlSWSPDG~~las~nA~n~~  243 (942)
T KOG0973|consen  216 ---------------------SP-------------------------------LTTFFLRLSWSPDGHHLASPNAVNGG  243 (942)
T ss_pred             ---------------------CC-------------------------------CcceeeecccCCCcCeecchhhccCC
Confidence                                 00                               011256678999999999863    2


Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCC-------------CC----EEEEEeCCCcEEEEeCCccccccccc-C
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-------------SR----LLVSGSADSTLKVWNMKTKKIEQDLP-G  542 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d-------------g~----~las~s~D~~v~vwd~~~~~~~~~l~-~  542 (573)
                      -.++.|.+-.+.+.-..|-||..++.+++|+|.             +.    .+|+||.|++|.||.....+.+.... -
T Consensus       244 ~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l  323 (942)
T KOG0973|consen  244 KSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL  323 (942)
T ss_pred             cceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh
Confidence            235888887777878889999999999999981             11    68899999999999986666543221 1


Q ss_pred             cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       543 h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ....|..+.|+|||..|+.+|.||+|.+..
T Consensus       324 f~~SI~DmsWspdG~~LfacS~DGtV~~i~  353 (942)
T KOG0973|consen  324 FNKSIVDMSWSPDGFSLFACSLDGTVALIH  353 (942)
T ss_pred             hcCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence            245799999999999999999999998764

>KOG0305|consensus

Probab=99.97  E-value=8.1e-30  Score=245.59  Aligned_cols=271  Identities=26%  Similarity=0.552  Sum_probs=217.2

Q ss_pred             EEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc
Q psy2671         213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK  292 (573)
Q Consensus       213 ~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~  292 (573)
                      +.|+.. ..||.|. ...|.+|+..++.....+..+...|+++.|+++|.+|++|..+|.|.+||....+.+.....+|.
T Consensus       183 ldWss~-n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~  260 (484)
T KOG0305|consen  183 LDWSSA-NVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHA  260 (484)
T ss_pred             hhcccC-CeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcC
Confidence            456633 3566654 56899999988876555555588999999999999999999999999999998877654333399


Q ss_pred             ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCe
Q psy2671         293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV  371 (573)
Q Consensus       293 ~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~  371 (573)
                      ..|.+++|..       ..+.+|+.|+.|..+|++..+.... +.+|...|+.+.|++++                    
T Consensus       261 ~rvg~laW~~-------~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~--------------------  313 (484)
T KOG0305|consen  261 SRVGSLAWNS-------SVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDG--------------------  313 (484)
T ss_pred             ceeEEEeccC-------ceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCC--------------------
Confidence            9999999973       4688899999999999887654433 66777777777776554                    


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK  451 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~  451 (573)
                                                                                .++|+|+.|+.+.+||.. ...
T Consensus       314 ----------------------------------------------------------~~lASGgnDN~~~Iwd~~-~~~  334 (484)
T KOG0305|consen  314 ----------------------------------------------------------NQLASGGNDNVVFIWDGL-SPE  334 (484)
T ss_pred             ----------------------------------------------------------CeeccCCCccceEeccCC-Ccc
Confidence                                                                      444555555555555542 223


Q ss_pred             ceeeeccccccEEEEEECC-CCCEEEEe--eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE--eCCCcE
Q psy2671         452 SLARMTGHQQLINCVEFSP-DGRIIASA--SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG--SADSTL  526 (573)
Q Consensus       452 ~~~~~~~h~~~v~~v~~sp-~g~~las~--s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~--s~D~~v  526 (573)
                      +...+..|...|..++|+| ...+||+|  +.|+.|++||..+++.+..+... ..|..+.|++..+-|+++  -.++.|
T Consensus       335 p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-sQVcsL~Wsk~~kEi~sthG~s~n~i  413 (484)
T KOG0305|consen  335 PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-SQVCSLIWSKKYKELLSTHGYSENQI  413 (484)
T ss_pred             ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC-CceeeEEEcCCCCEEEEecCCCCCcE
Confidence            4556778999999999999 56789986  48999999999999988877643 579999999998766664  357789


Q ss_pred             EEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         527 KVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .||+..+.+.+..+.+|..+|..+++||||..+++|+.|.++++|+
T Consensus       414 ~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~  459 (484)
T KOG0305|consen  414 TLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWN  459 (484)
T ss_pred             EEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence            9999999999999999999999999999999999999999999997

>KOG0310|consensus

Probab=99.97  E-value=5.2e-30  Score=237.32  Aligned_cols=276  Identities=23%  Similarity=0.363  Sum_probs=220.6

Q ss_pred             CCcEEEEEEcCCCCe-EEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         207 AEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~-las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      .++|.+++|||...+ +|+++ .-.+.||+..+.....++......|.++.|-.||+.||.|...|.|+++|..+ +.+.
T Consensus        26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-r~iL  103 (487)
T KOG0310|consen   26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-RVIL  103 (487)
T ss_pred             cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-HHHH
Confidence            468999999996543 44443 35899999988877777777888899999999999999999999999999544 4555


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIK  363 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~  363 (573)
                      ..+.+|+.++....|.|.    ++..|++|+.|+.+++||+.+......+.+|+.-|.|.+|++.+  +++|||+||+||
T Consensus       104 R~~~ah~apv~~~~f~~~----d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vr  179 (487)
T KOG0310|consen  104 RQLYAHQAPVHVTKFSPQ----DNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVR  179 (487)
T ss_pred             HHHhhccCceeEEEeccc----CCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEE
Confidence            678899999999999874    45678889999999999988877655678888888888876542  456666666666


Q ss_pred             EEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671         364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL  443 (573)
Q Consensus       364 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l  443 (573)
                      +||.+                                                                           
T Consensus       180 l~DtR---------------------------------------------------------------------------  184 (487)
T KOG0310|consen  180 LWDTR---------------------------------------------------------------------------  184 (487)
T ss_pred             EEEec---------------------------------------------------------------------------
Confidence            66544                                                                           


Q ss_pred             EcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE-EEeecCCcceEEEEEECCCCCEEEEEeC
Q psy2671         444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~-~~~~~~h~~~v~~v~~s~dg~~las~s~  522 (573)
                          ..... ..-..|..+|..|.|-|.|.+||+++. ..|++||+-+|.. +..+..|...|+|+++..+++.|++||-
T Consensus       185 ----~~~~~-v~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sL  258 (487)
T KOG0310|consen  185 ----SLTSR-VVELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSL  258 (487)
T ss_pred             ----cCCce-eEEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccc
Confidence                22111 112346778999999999999999874 5799999986644 4444459999999999999999999999


Q ss_pred             CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       523 D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      |+.|++||+.+.+.+..+. ..++|.+++.+||++.++.|..+|.+.+
T Consensus       259 D~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~  305 (487)
T KOG0310|consen  259 DRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSI  305 (487)
T ss_pred             ccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeee
Confidence            9999999998888877665 5689999999999999999999997654

>KOG0301|consensus

Probab=99.97  E-value=8.3e-30  Score=245.16  Aligned_cols=281  Identities=21%  Similarity=0.423  Sum_probs=217.5

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +.+.+.||.+.|..+++.+ +..++++|.||++|+|+-..+.-+                                    
T Consensus         6 ls~~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~~~l------------------------------------   48 (745)
T KOG0301|consen    6 LSHELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGKQYL------------------------------------   48 (745)
T ss_pred             eEEEeccCccchheeEecC-CeEEeecCCCCceeeeeccCcccc------------------------------------
Confidence            3456789999999999865 458999999999999986433211                                    


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEE-EEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVIS-VKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~-~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                       -.+.+.+|.+.|.+ ++|-+ ++-.+++|++|.+|.+|...+..|++.++||+..|.|++...
T Consensus        49 -----------------~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~  111 (745)
T KOG0301|consen   49 -----------------ETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGE  111 (745)
T ss_pred             -----------------cceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCC
Confidence                             01235577777777 88875 444699999999999999999999999999999999999887


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ++. ++|||+|.++++|....-   ...+.+|...|.++..-|.      ..++||+.|.+||+|.-  ++.++++.+|+
T Consensus       112 ~~~-~iSgSWD~TakvW~~~~l---~~~l~gH~asVWAv~~l~e------~~~vTgsaDKtIklWk~--~~~l~tf~gHt  179 (745)
T KOG0301|consen  112 DGT-LISGSWDSTAKVWRIGEL---VYSLQGHTASVWAVASLPE------NTYVTGSADKTIKLWKG--GTLLKTFSGHT  179 (745)
T ss_pred             cCc-eEecccccceEEecchhh---hcccCCcchheeeeeecCC------CcEEeccCcceeeeccC--Cchhhhhccch
Confidence            776 999999999999976432   2346788888887776542      26788888888888874  56677788888


Q ss_pred             ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       340 ~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      ..|+.+++-+++.+++++.||.|++|++ +|.                                                
T Consensus       180 D~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge------------------------------------------------  210 (745)
T KOG0301|consen  180 DCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGE------------------------------------------------  210 (745)
T ss_pred             hheeeeEEecCCCeEeecCCceEEEEec-cCc------------------------------------------------
Confidence            8888888777767777777777777776 332                                                


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                      .+.++.||+.-|+++...+++..+++++.|++++||+..  ++.+.+.
T Consensus       211 --------------------------------~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~  256 (745)
T KOG0301|consen  211 --------------------------------VLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVIT  256 (745)
T ss_pred             --------------------------------eeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEe
Confidence                                            234455677778888877788899999999999999865  6667776


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      -....|+++.+-++|.. ++|+.||.||||...
T Consensus       257 lPttsiWsa~~L~NgDI-vvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  257 LPTTSIWSAKVLLNGDI-VVGGSDGRVRVFTVD  288 (745)
T ss_pred             cCccceEEEEEeeCCCE-EEeccCceEEEEEec
Confidence            55568899988888765 568889999999765

>KOG0772|consensus

Probab=99.97  E-value=4.3e-30  Score=238.75  Aligned_cols=289  Identities=23%  Similarity=0.391  Sum_probs=215.9

Q ss_pred             cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC
Q psy2671         199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG  271 (573)
Q Consensus       199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg  271 (573)
                      |...+++|+..|.++++.|.|.++++||.|.+|++||+..-       +.+.-++.|  .|+++.|++.|..|++.+...
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h--~i~sl~ys~Tg~~iLvvsg~a  236 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETH--QINSLQYSVTGDQILVVSGSA  236 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCccccc--ccceeeecCCCCeEEEEecCc
Confidence            45678899999999999999999999999999999998642       222233444  589999999999999999999


Q ss_pred             eEEEEECCCCcee-----------cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEEec---
Q psy2671         272 VIHAWDSSTGKQI-----------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLT---  336 (573)
Q Consensus       272 ~i~vwd~~~~~~~-----------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~---  336 (573)
                      ..+++|-......           ....+||...+++.+|.|..    .+.|+|++.||++||||+...+. ..++.   
T Consensus       237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~----k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~  312 (641)
T KOG0772|consen  237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN----KEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP  312 (641)
T ss_pred             ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCc----ccceEEecCCCcEEEEecCCchhheeEEeecc
Confidence            9999996532211           12346899999999999963    45799999999999999875432 11111   


Q ss_pred             --CCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671         337 --SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES  414 (573)
Q Consensus       337 --~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  414 (573)
                        +-.-.++.++|+                                                                  
T Consensus       313 ~~g~Rv~~tsC~~n------------------------------------------------------------------  326 (641)
T KOG0772|consen  313 AGGKRVPVTSCAWN------------------------------------------------------------------  326 (641)
T ss_pred             CCCcccCceeeecC------------------------------------------------------------------
Confidence              111122333333                                                                  


Q ss_pred             hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc--cceeeeccccc--cEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK--KSLARMTGHQQ--LINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~--~~~~~~~~h~~--~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                                  ++|..+|+|..||.|.+|+..+..  .....-..|..  .|+||.||+||++|++-+.|+++++||++
T Consensus       327 ------------rdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr  394 (641)
T KOG0772|consen  327 ------------RDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR  394 (641)
T ss_pred             ------------CCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence                        445566666666666666643221  11223345665  79999999999999999999999999998


Q ss_pred             CCe-EEEeecCCc--ceEEEEEECCCCCEEEEEeC------CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         491 IGK-FITTLRGHV--QAVYMVAWSSDSRLLVSGSA------DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       491 ~~~-~~~~~~~h~--~~v~~v~~s~dg~~las~s~------D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      ..+ ++.+..+-.  -.-+.++||||.++|++|..      .+++.+||..+...++.+.-....|..+.|+|.=++|..
T Consensus       395 q~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~  474 (641)
T KOG0772|consen  395 QFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFA  474 (641)
T ss_pred             ccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheee
Confidence            753 344333321  23457899999999999854      467999999999888888777888999999999889999


Q ss_pred             eeCCCcEEEc
Q psy2671         562 GGKDKVLRLW  571 (573)
Q Consensus       562 ~~~d~~i~iw  571 (573)
                      ++.||++++|
T Consensus       475 gsgdG~~~vy  484 (641)
T KOG0772|consen  475 GSGDGTAHVY  484 (641)
T ss_pred             ecCCCceEEE
Confidence            9999999886

>KOG0641|consensus

Probab=99.97  E-value=3.4e-28  Score=203.15  Aligned_cols=293  Identities=25%  Similarity=0.360  Sum_probs=228.6

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC------C------ee---eEEecCCCCcEEEEEEcCCCCeEEEEeeC
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT------Q------TP---LFKCEGHKHWVLCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~------~------~~---~~~~~~h~~~V~~v~~s~dg~~l~sgs~d  270 (573)
                      .+..|.+++|+|.|...|.|+...+++|--...      +      .+   ....+.|++.|.|.+|||+|+.|++|+.|
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd  110 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND  110 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence            356799999999999999999999999875321      1      11   12346789999999999999999999999


Q ss_pred             CeEEEEECCCCce--ec--ccccCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCCCccEEEE
Q psy2671         271 GVIHAWDSSTGKQ--IG--QPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVRVLTSHTRSVTCI  345 (573)
Q Consensus       271 g~i~vwd~~~~~~--~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  345 (573)
                      .+|++.-.+...+  ..  ..+.-|.+.|..++|.... +..+..|+++| .|..|.+-|...++....+.+|++.|.++
T Consensus       111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~-~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal  189 (350)
T KOG0641|consen  111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDP-ESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL  189 (350)
T ss_pred             ceEEEEecccccccccCcceeeeecCCceeeeEEecCC-CcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE
Confidence            9999876543221  11  1234577788899885432 23456677664 36667777888999999999999999988


Q ss_pred             EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .-=...++++|++|.+|++||++-...+.++....                                             
T Consensus       190 yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~---------------------------------------------  224 (350)
T KOG0641|consen  190 YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDF---------------------------------------------  224 (350)
T ss_pred             EEecCcEEEccCCCceEEEEeeeccceeeeccCcc---------------------------------------------
Confidence            63334578999999999999987554443332100                                             


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV  505 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v  505 (573)
                                           ..+..       ....|.+|+..|.|++|++|-.|....+||++-++.++.+..|...|
T Consensus       225 ---------------------~~~gl-------essavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadi  276 (350)
T KOG0641|consen  225 ---------------------HDGGL-------ESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADI  276 (350)
T ss_pred             ---------------------cCCCc-------ccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccce
Confidence                                 00000       13468899999999999999999999999999999999999999999


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCccc----ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|+.|||...++++++.|..|++=|++..-    .......|.+++..+.|+|..-.+++.+.|+++.+|.
T Consensus       277 r~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa  347 (350)
T KOG0641|consen  277 RCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWA  347 (350)
T ss_pred             eEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEec
Confidence            999999999999999999999999986532    1223456899999999999988899999999999996

>KOG0268|consensus

Probab=99.97  E-value=1.5e-30  Score=231.89  Aligned_cols=286  Identities=22%  Similarity=0.406  Sum_probs=225.6

Q ss_pred             ccCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         200 TSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                      ...+.||.+.|.|++=+|.. ..+|+|+.||.|+|||+....++..++.|.+.|..|++..  ..+++++.|.+|+.|.+
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~  136 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI  136 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence            35678999999999999986 7899999999999999999999999999999999999976  57899999999999987


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEE
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSA  356 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~  356 (573)
                      +.. .+ ..+.+ ...+..+.     .......++|+|.  .|-|||.....++..+.--...|.++.|++--  .|+++
T Consensus       137 ~~~-p~-~tilg-~s~~~gId-----h~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~  206 (433)
T KOG0268|consen  137 DGP-PL-HTILG-KSVYLGID-----HHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC  206 (433)
T ss_pred             cCC-cc-eeeec-cccccccc-----cccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence            642 11 11111 11122221     1123356888876  48899999888888888778889999998754  68888


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      +.|++|.+||++++.+++...-                   ....+.+.                   +.|++-.+++|+
T Consensus       207 ~sDrsIvLyD~R~~~Pl~KVi~-------------------~mRTN~Is-------------------wnPeafnF~~a~  248 (433)
T KOG0268|consen  207 ASDRSIVLYDLRQASPLKKVIL-------------------TMRTNTIC-------------------WNPEAFNFVAAN  248 (433)
T ss_pred             ccCCceEEEecccCCccceeee-------------------ecccccee-------------------cCccccceeecc
Confidence            9999999999998876543210                   01111122                   235566789999


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCCCC
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSR  515 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~dg~  515 (573)
                      +|..++.+|++....++....+|...|.+|+|||.|+-+++||+|.+|+||..+.+....... .-.+.|.|+.||.|.+
T Consensus       249 ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dsk  328 (433)
T KOG0268|consen  249 EDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSK  328 (433)
T ss_pred             ccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEecccc
Confidence            999999999998888888889999999999999999999999999999999987664322221 1235699999999999


Q ss_pred             EEEEEeCCCcEEEEeCCccc
Q psy2671         516 LLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~  535 (573)
                      ++++||.|+.|++|..+..+
T Consensus       329 yi~SGSdd~nvRlWka~Ase  348 (433)
T KOG0268|consen  329 YIISGSDDGNVRLWKAKASE  348 (433)
T ss_pred             EEEecCCCcceeeeecchhh
Confidence            99999999999999876543

>KOG1539|consensus

Probab=99.97  E-value=1.7e-27  Score=233.77  Aligned_cols=356  Identities=20%  Similarity=0.330  Sum_probs=266.4

Q ss_pred             EEEEEEcCCC--CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         210 VISVKFSPNG--RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       210 V~~~~fsp~g--~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      |+++ ++|.-  +.++.|+.+|.+.||++++++.+++++++...|+++.=+|-=..+|.|..+|+|.+++++.++.+.. 
T Consensus       162 Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~s-  239 (910)
T KOG1539|consen  162 ITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMS-  239 (910)
T ss_pred             eeeE-ecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEE-
Confidence            5555 56652  4578899999999999999999999999999999999999888999999999999999999887643 


Q ss_pred             ccCCcccEEEEEecccccCCCC-CEEEEEeCCCcEEEEECCCCeEEEEec-CCCccEEEEEECCC-cEEEEEeCCCeEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQC-RRFASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGGS-GLIYSASQDRTIKV  364 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~-~~l~s~s~d~~i~v  364 (573)
                      ++...+.|++++|..     +| ..+++++..|.+-+||+...+....+. .|.+.|....+.+. ..+++++.|+++++
T Consensus       240 Fk~d~g~VtslSFrt-----DG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~  314 (910)
T KOG1539|consen  240 FKQDWGRVTSLSFRT-----DGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV  314 (910)
T ss_pred             EEccccceeEEEecc-----CCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence            333358899999853     33 357788888999999999888776655 78888888888655 47899999999999


Q ss_pred             EeCC--CC--eeeEeccCCcceeeEEEecc-CceeEEEEcCCCcee-eCCCCchh----hh----------------hhh
Q psy2671         365 WRAS--DG--VMCRTLEGHAHWVNTLALST-DYLMRVEATSTGGFK-YDPANPEE----SS----------------KHA  418 (573)
Q Consensus       365 w~~~--~~--~~~~~~~~~~~~v~~~~~s~-~~~~~~~~~~~~~~~-~~~~~~~~----~~----------------~~~  418 (573)
                      |-.+  +|  ..++.-.||..+-..+++.. .......+..+..+. +.......    ..                ...
T Consensus       315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k  394 (910)
T KOG1539|consen  315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLK  394 (910)
T ss_pred             EEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhc
Confidence            8544  44  45677789988877777652 333333333333221 10000000    00                000


Q ss_pred             hhheeee-------CCCCcEEEEEeCCCeEEEEcCCCCccceeee-----ccccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         419 LAKYQAQ-------CPEGEKLVSGSDDFTLFLWNPEKEKKSLARM-----TGHQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       419 ~~~~~~~-------~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~-----~~h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                      .......       ....+.++..-.+..++.|+.++...--..+     ......+++|+.++-|++.+.|...|+|-+
T Consensus       395 ~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~  474 (910)
T KOG1539|consen  395 LPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDR  474 (910)
T ss_pred             CCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEE
Confidence            0000000       0112345555567789999987653211111     122356899999999999999999999999


Q ss_pred             EeCCCCeEEEee---cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc----------------------------
Q psy2671         487 WDGRIGKFITTL---RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK----------------------------  535 (573)
Q Consensus       487 wd~~~~~~~~~~---~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~----------------------------  535 (573)
                      |+.++|-....+   ..|..+|..++...-++.+++++.||-+++||.+++.                            
T Consensus       475 fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~d  554 (910)
T KOG1539|consen  475 FNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALD  554 (910)
T ss_pred             EEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcC
Confidence            999999877777   5899999999999889999999999999999987543                            


Q ss_pred             -------------ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         536 -------------IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       536 -------------~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                                   .++.+.||+++|++++|||||+||++++.|++||+|+
T Consensus       555 df~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wD  604 (910)
T KOG1539|consen  555 DFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWD  604 (910)
T ss_pred             ceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEe
Confidence                         2234679999999999999999999999999999997

>KOG0305|consensus

Probab=99.97  E-value=4.9e-29  Score=240.21  Aligned_cols=240  Identities=32%  Similarity=0.566  Sum_probs=209.2

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC-CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      .+.|+++.|+++|.+||.|..+|.|.|||..+.+.+..+.+ |...|-+++|+  +..+.+|+.|+.|..+|++......
T Consensus       217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~  294 (484)
T KOG0305|consen  217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV  294 (484)
T ss_pred             CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence            67899999999999999999999999999999888888888 99999999998  5679999999999999999887766


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--cEEEEEe--CCCe
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--GLIYSAS--QDRT  361 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s--~d~~  361 (573)
                      ..+.+|...|..+.|.+     +++++|+||.|+.+.|||.....+...+..|...|.+++|+|-  +.|++|+  .|++
T Consensus       295 ~~~~~H~qeVCgLkws~-----d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~  369 (484)
T KOG0305|consen  295 STLQGHRQEVCGLKWSP-----DGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRC  369 (484)
T ss_pred             hhhhcccceeeeeEECC-----CCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccE
Confidence            66889999999999987     6789999999999999999888888999999999999999874  5777764  5888


Q ss_pred             EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671         362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL  441 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  441 (573)
                      |++|+..+|..+....                                                                
T Consensus       370 i~fwn~~~g~~i~~vd----------------------------------------------------------------  385 (484)
T KOG0305|consen  370 IKFWNTNTGARIDSVD----------------------------------------------------------------  385 (484)
T ss_pred             EEEEEcCCCcEecccc----------------------------------------------------------------
Confidence            8888877654432211                                                                


Q ss_pred             EEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe--eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEE
Q psy2671         442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA--SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS  519 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~--s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las  519 (573)
                                       ....|.+|.|++..+-|+++  ..+..|.||+..+.+.+..+.+|...|..+++||||..+++
T Consensus       386 -----------------tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t  448 (484)
T KOG0305|consen  386 -----------------TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVT  448 (484)
T ss_pred             -----------------cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEE
Confidence                             12458899999988666654  45678999999999999999999999999999999999999


Q ss_pred             EeCCCcEEEEeCCcc
Q psy2671         520 GSADSTLKVWNMKTK  534 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~  534 (573)
                      |+.|.++++|++-..
T Consensus       449 ~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  449 GAADETLRFWNLFDE  463 (484)
T ss_pred             ecccCcEEeccccCC
Confidence            999999999998664

>KOG0283|consensus

Probab=99.97  E-value=9.9e-30  Score=251.13  Aligned_cols=282  Identities=19%  Similarity=0.374  Sum_probs=209.8

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEE--------ecccccCC---CCC--EEE
Q psy2671         247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS--------WEPFHLNH---QCR--RFA  313 (573)
Q Consensus       247 ~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~---~~~--~l~  313 (573)
                      .|.+.|.++.||+||+|||+||.|+.|+||.+.......    .+...-.++.        ..|...+.   .++  ..-
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~----~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~  340 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMR----VAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR  340 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhc----ccccccchhhhhhhhccccCccccccccccccccccc
Confidence            799999999999999999999999999999876522110    0000000000        00100000   000  011


Q ss_pred             EEeCCCcEEEEECC----CCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEec
Q psy2671         314 SSGKDGAIRIWDVI----LSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS  389 (573)
Q Consensus       314 s~~~dg~v~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s  389 (573)
                      .+.....+ +.+..    ..+++..+.+|...|..+.|+.++.|+++|.|.++|+|++....+++.+. |..+|++++|+
T Consensus       341 ~~~~s~~~-~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFn  418 (712)
T KOG0283|consen  341 KGSQSPCV-LLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFN  418 (712)
T ss_pred             cccCCccc-cCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEec
Confidence            11222221 12211    23567778999999999999999999999999999999999888877774 89999999998


Q ss_pred             cCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC
Q psy2671         390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS  469 (573)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s  469 (573)
                      |.                                    +..++++|+-||.+|||++...+  +.....-.+.|++++|+
T Consensus       419 Pv------------------------------------DDryFiSGSLD~KvRiWsI~d~~--Vv~W~Dl~~lITAvcy~  460 (712)
T KOG0283|consen  419 PV------------------------------------DDRYFISGSLDGKVRLWSISDKK--VVDWNDLRDLITAVCYS  460 (712)
T ss_pred             cc------------------------------------CCCcEeecccccceEEeecCcCe--eEeehhhhhhheeEEec
Confidence            63                                    46799999999999999987643  33344445789999999


Q ss_pred             CCCCEEEEeeCCCcEEEEeCCCCeEEEeec---------CCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCccccccc
Q psy2671         470 PDGRIIASASFDKSIKLWDGRIGKFITTLR---------GHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       470 p~g~~las~s~dg~i~lwd~~~~~~~~~~~---------~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      |||+..+.|+.+|.+++|+....++.....         .|. .|+.+.|.|... .|++.+.|..|||||.+..+++..
T Consensus       461 PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~K  539 (712)
T KOG0283|consen  461 PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHK  539 (712)
T ss_pred             cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhh
Confidence            999999999999999999988776654432         122 799999997433 577788999999999999888888


Q ss_pred             ccCcCC--CEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         540 LPGHGD--EVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       540 l~~h~~--~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      ++|+..  .=....|+.||++|+++++|..|++|++
T Consensus       540 fKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~  575 (712)
T KOG0283|consen  540 FKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN  575 (712)
T ss_pred             hcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence            887643  2346789999999999999999999974

>KOG0313|consensus

Probab=99.97  E-value=1.7e-29  Score=226.47  Aligned_cols=254  Identities=28%  Similarity=0.489  Sum_probs=195.1

Q ss_pred             ccccccCCCccccEEEEEEcCC---CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCC
Q psy2671         100 TRCTSSMPGHAEAVISVKFSPN---GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLN  176 (573)
Q Consensus       100 ~~~~~~~~gH~~~V~~l~~s~~---~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (573)
                      ..+...+.||.++|.++++.-.   ...++|+|.|.++++|..+.+....                              
T Consensus       134 Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~------------------------------  183 (423)
T KOG0313|consen  134 GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKV------------------------------  183 (423)
T ss_pred             CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhh------------------------------
Confidence            3566778899999998887432   2369999999999999987654221                              


Q ss_pred             ccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC-------------------
Q psy2671         177 TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT-------------------  237 (573)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~-------------------  237 (573)
                                           ++...-.||.++|-+++..++|.++++||.|.+++||+..                   
T Consensus       184 ---------------------~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~  242 (423)
T KOG0313|consen  184 ---------------------KALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQK  242 (423)
T ss_pred             ---------------------hHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhh
Confidence                                 1222334999999999999999999999999999999932                   


Q ss_pred             ------CCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCE
Q psy2671         238 ------TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR  311 (573)
Q Consensus       238 ------~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~  311 (573)
                            ++.|+..+.||+..|.+|.|++ ...++++++|++|++||+++|..+....  ....+.++.+.|     ..++
T Consensus       243 ~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~--~~ksl~~i~~~~-----~~~L  314 (423)
T KOG0313|consen  243 REKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT--TNKSLNCISYSP-----LSKL  314 (423)
T ss_pred             hhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee--cCcceeEeeccc-----ccce
Confidence                  1246778899999999999987 5689999999999999999987654322  234466666655     4578


Q ss_pred             EEEEeCCCcEEEEECCCCe---EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEe
Q psy2671         312 FASSGKDGAIRIWDVILSQ---CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL  388 (573)
Q Consensus       312 l~s~~~dg~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~  388 (573)
                      +++|+.|..+|+||.+++.   ....+.+|+..|.++.|++.+                                     
T Consensus       315 l~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~-------------------------------------  357 (423)
T KOG0313|consen  315 LASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTN-------------------------------------  357 (423)
T ss_pred             eeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCC-------------------------------------
Confidence            9999999999999987653   223355555555555554432                                     


Q ss_pred             ccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE
Q psy2671         389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF  468 (573)
Q Consensus       389 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~  468 (573)
                                                              -.+|++|+.|+++++||.++...++..+.+|.+.|.++.|
T Consensus       358 ----------------------------------------~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW  397 (423)
T KOG0313|consen  358 ----------------------------------------EFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDW  397 (423)
T ss_pred             ----------------------------------------ceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEec
Confidence                                                    2356777777777777777777778888899999999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCC
Q psy2671         469 SPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~  490 (573)
                      +. +.+|++||.|.+++++...
T Consensus       398 ~~-~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  398 NE-GGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             cC-CceEEeccCcceEEEeccc
Confidence            74 6799999999999998643

>KOG0310|consensus

Probab=99.97  E-value=3.5e-29  Score=231.83  Aligned_cols=282  Identities=23%  Similarity=0.372  Sum_probs=217.9

Q ss_pred             ccccEEEEEEcCCCCe-eEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         109 HAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~-lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      -.+.|++++|||..++ +|+.| .-.|.|++..+....                                          
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~------------------------------------------   61 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVR------------------------------------------   61 (487)
T ss_pred             ccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhh------------------------------------------
Confidence            4568999999997764 33333 246888887654332                                          


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC-eEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK-QLVS  266 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~-~l~s  266 (573)
                                   .++....+.|.++.|-.||+.||+|...|.|+|+|+++...+..+.+|+.+|..+.|+|+++ .+++
T Consensus        62 -------------k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s  128 (487)
T KOG0310|consen   62 -------------KTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVS  128 (487)
T ss_pred             -------------hhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEe
Confidence                         11223456799999999999999999999999999887767778899999999999999655 5678


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      |+.|+.+++||+.++.. ...+.+|+++|.+.+|.|.    ....++|||.||+||+||++.......--.|..+|..+.
T Consensus       129 ~sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~----~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl  203 (487)
T KOG0310|consen  129 GSDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPA----NDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVL  203 (487)
T ss_pred             cCCCceEEEEEcCCcEE-EEEecCCcceeEeeccccC----CCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEE
Confidence            88899999999988764 3468899999999999884    345799999999999999987632222234666776666


Q ss_pred             ECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671         347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC  426 (573)
Q Consensus       347 ~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (573)
                      +-++|                                                                           
T Consensus       204 ~lpsg---------------------------------------------------------------------------  208 (487)
T KOG0310|consen  204 ALPSG---------------------------------------------------------------------------  208 (487)
T ss_pred             EcCCC---------------------------------------------------------------------------
Confidence            65553                                                                           


Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                         ..+|+++ ...+++||+.++.+.+..+..|.+.|+|+++..++..|++|+.|+.|++||..+.+.+..+. -.++|.
T Consensus       209 ---s~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvL  283 (487)
T KOG0310|consen  209 ---SLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVL  283 (487)
T ss_pred             ---CEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-ccccee
Confidence               2333322 12355555554555555555699999999999999999999999999999988888877765 347899


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      +++.+||++.++.|..||.+.+=+.
T Consensus       284 siavs~dd~t~viGmsnGlv~~rr~  308 (487)
T KOG0310|consen  284 SIAVSPDDQTVVIGMSNGLVSIRRR  308 (487)
T ss_pred             eEEecCCCceEEEecccceeeeehh
Confidence            9999999999999999998877644

>KOG0308|consensus

Probab=99.97  E-value=9.5e-30  Score=242.93  Aligned_cols=279  Identities=27%  Similarity=0.409  Sum_probs=227.1

Q ss_pred             CCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeecccc
Q psy2671         120 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRC  199 (573)
Q Consensus       120 ~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (573)
                      |.+++|.|||.||.||+|+.......                                                 +..+|
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~-------------------------------------------------~s~~~   65 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNE-------------------------------------------------PSTPY   65 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCC-------------------------------------------------cccch
Confidence            56788999999999999997532110                                                 11224


Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEE-cCCCCeEEEEeeCCeEEEE
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAW-SPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~-s~dg~~l~sgs~dg~i~vw  276 (573)
                      ..++..|.+.|..+...-+|+.|+++|.|.+|++|+...+  -++.+++.|.+.|.|+++ .++...+|||+-|+.|.+|
T Consensus        66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW  145 (735)
T KOG0308|consen   66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW  145 (735)
T ss_pred             hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence            5677889999999999999999999999999999998776  456677899999999999 7888899999999999999


Q ss_pred             ECCCCce--e-------cccc-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         277 DSSTGKQ--I-------GQPM-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       277 d~~~~~~--~-------~~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      |+++|..  +       ...+ .|++..|++++.++     .+..+++||..+.+|+||.++++.+..+.+|+..|.++.
T Consensus       146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-----t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll  220 (735)
T KOG0308|consen  146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-----TGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLL  220 (735)
T ss_pred             EccCcchhhhhhccccccccCCCCCccceeeeecCC-----cceEEEecCcccceEEeccccccceeeeeccccceEEEE
Confidence            9997732  1       1122 38899999999765     456799999999999999999999999999999999999


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .+++| .++++|.||+|++||+....++.++..|...|.++..+++                                  
T Consensus       221 ~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s----------------------------------  266 (735)
T KOG0308|consen  221 VNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS----------------------------------  266 (735)
T ss_pred             EcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC----------------------------------
Confidence            99988 7999999999999999999999999999988888876643                                  


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                         -..+.+|+.||.|..=|+++...... +.....+|..+..+.+.+-+-+++.|+.|+-|...
T Consensus       267 ---f~~vYsG~rd~~i~~Tdl~n~~~~tl-ick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~  327 (735)
T KOG0308|consen  267 ---FTHVYSGGRDGNIYRTDLRNPAKSTL-ICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE  327 (735)
T ss_pred             ---cceEEecCCCCcEEecccCCchhheE-eecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence               35788999999999988887543332 22334456666666555555778889999999643

>KOG0283|consensus

Probab=99.97  E-value=3.5e-29  Score=247.30  Aligned_cols=296  Identities=22%  Similarity=0.393  Sum_probs=201.9

Q ss_pred             ccCC-CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCC--eeeeeccccccc--------ccccccCC
Q psy2671         104 SSMP-GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP--YLFYVNETEITK--------TLADVLPL  172 (573)
Q Consensus       104 ~~~~-gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~  172 (573)
                      +.+. .|.+.|+++.||+||+||||||.|+.||||.+......-..++..  ..+..+......        ........
T Consensus       260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~  339 (712)
T KOG0283|consen  260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS  339 (712)
T ss_pred             eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence            3455 799999999999999999999999999999986522110000000  000000000000        00000000


Q ss_pred             CCCCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcE
Q psy2671         173 DTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV  252 (573)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V  252 (573)
                      ........   ..-+...+.+.  .+....+.||.+.|+.+.||.++ +|+++|+|.|||||++....++..+ .|...|
T Consensus       340 ~~~~~s~~---~~~p~~~f~f~--ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfV  412 (712)
T KOG0283|consen  340 RKGSQSPC---VLLPLKAFVFS--EKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVF-SHNDFV  412 (712)
T ss_pred             ccccCCcc---ccCCCcccccc--ccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEE-ecCCee
Confidence            00000000   00000111111  22345678999999999999887 8999999999999999998888776 599999


Q ss_pred             EEEEEcC-CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy2671         253 LCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC  331 (573)
Q Consensus       253 ~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  331 (573)
                      +||+|+| |.+|+++|+-||.+++|++...+...  ...-...|++++|.|     +|+..+.|+.+|.+++|+....+.
T Consensus       413 TcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~--W~Dl~~lITAvcy~P-----dGk~avIGt~~G~C~fY~t~~lk~  485 (712)
T KOG0283|consen  413 TCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVD--WNDLRDLITAVCYSP-----DGKGAVIGTFNGYCRFYDTEGLKL  485 (712)
T ss_pred             EEEEecccCCCcEeecccccceEEeecCcCeeEe--ehhhhhhheeEEecc-----CCceEEEEEeccEEEEEEccCCeE
Confidence            9999999 88899999999999999997655431  223347799999887     688999999999999999877665


Q ss_pred             EEEec--CC------CccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         332 VRVLT--SH------TRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       332 ~~~~~--~h------~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      .....  .|      ...|+.+.+.+..  .+++.+.|..|||+|.++-.++..++|....-..+               
T Consensus       486 ~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~---------------  550 (712)
T KOG0283|consen  486 VSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQI---------------  550 (712)
T ss_pred             EEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcce---------------
Confidence            44321  11      2379999986543  58999999999999998877777777653211100               


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~  448 (573)
                                          ...+..+|++|+++++|..|++|+...
T Consensus       551 --------------------~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  551 --------------------SASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             --------------------eeeEccCCCEEEEeecCceEEEEeCCC
Confidence                                112235799999999999999999754

>KOG0299|consensus

Probab=99.97  E-value=9e-29  Score=227.38  Aligned_cols=277  Identities=29%  Similarity=0.436  Sum_probs=226.4

Q ss_pred             EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec----c------------cc-cCCcccEEEEEeccccc
Q psy2671         243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG----Q------------PM-RGHKQWITALSWEPFHL  305 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~----~------------~~-~~h~~~v~~~~~~~~~~  305 (573)
                      .....|..++.||+++||+++.++++.+|+|.-|++.+|+...    .            .. ++|...+.+++..    
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS----  211 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVS----  211 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEc----
Confidence            4456788999999999999999999999999999998887431    0            11 2677778888754    


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceee
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN  384 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~  384 (573)
                       +++++|++|+.|..|.||+..+.+.++.+.+|.+.|.+++|-. ...+|+++.|+++++|++.....+.++-||...|.
T Consensus       212 -~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~  290 (479)
T KOG0299|consen  212 -SDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVL  290 (479)
T ss_pred             -CCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCcccee
Confidence             5889999999999999999999999999999999999999964 45799999999999999999888899999988877


Q ss_pred             EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEE
Q psy2671         385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN  464 (573)
Q Consensus       385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~  464 (573)
                      .+....                                     .+..+-+|+.|+++++|++....  ...+.+|...+-
T Consensus       291 ~IdaL~-------------------------------------reR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sid  331 (479)
T KOG0299|consen  291 GIDALS-------------------------------------RERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSID  331 (479)
T ss_pred             eechhc-------------------------------------ccceEEeccccceeEEEeccccc--eeeeeCCCCCee
Confidence            664321                                     13345566699999999985433  345678888999


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CC-----------cceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GH-----------VQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       465 ~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h-----------~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      |++|-.+ ..+++||.||.|.+|++...+++.+.+ +|           ..+|++++..|...++|+||.+|.||+|-+.
T Consensus       332 cv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~  410 (479)
T KOG0299|consen  332 CVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIE  410 (479)
T ss_pred             eEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEec
Confidence            9999765 578899999999999998888776543 22           2389999999999999999999999999998


Q ss_pred             cc----cccccccCcCCCEEEEEEccCCCEEEEe-eCC
Q psy2671         533 TK----KIEQDLPGHGDEVYAVDWAPDGEKVASG-GKD  565 (573)
Q Consensus       533 ~~----~~~~~l~~h~~~v~~~~~s~d~~~l~s~-~~d  565 (573)
                      .+    .++..++ -.+-|+++.|+++|+.|++| |..
T Consensus       411 ~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkE  447 (479)
T KOG0299|consen  411 DGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKE  447 (479)
T ss_pred             CCccccceeeecc-cccEEEEEEEccCCCEEEEecccc
Confidence            77    3455555 46789999999999976654 443

>KOG0289|consensus

Probab=99.97  E-value=2.6e-28  Score=222.49  Aligned_cols=282  Identities=21%  Similarity=0.369  Sum_probs=234.2

Q ss_pred             ccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceee
Q psy2671         111 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAV  190 (573)
Q Consensus       111 ~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (573)
                      -.|.++...|..+.++||+.|.++.++|..+++.+                                             
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l---------------------------------------------  254 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQIL---------------------------------------------  254 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhh---------------------------------------------
Confidence            35788888888889999999999999998766433                                             


Q ss_pred             EEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC
Q psy2671         191 FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       191 ~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d  270 (573)
                                ..+.||.-.|+.+.|+|+...+++++.|..|+||...........+.|..+|+.+..+|.|.||++++.|
T Consensus       255 ----------~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d  324 (506)
T KOG0289|consen  255 ----------ATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASND  324 (506)
T ss_pred             ----------hhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCC
Confidence                      4578999999999999999999999999999999988777777788999999999999999999999999


Q ss_pred             CeEEEEECCCCceecccccC-CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671         271 GVIHAWDSSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       271 g~i~vwd~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  349 (573)
                      |+....|.++|.++...... ..-.+++..|+|     +|..|.+|..||.++|||+.....+..+.+|+++|..+.|+.
T Consensus       325 ~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-----DgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsE  399 (506)
T KOG0289|consen  325 GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-----DGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSE  399 (506)
T ss_pred             ceEEEEEccCCcEEEEEeeccccceeEEeeEcC-----CceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEecc
Confidence            99999999999887543321 223477777776     778999999999999999999988899999999999999998


Q ss_pred             Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       350 ~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      +| .++++..|++|++||++..+..+++                                                    
T Consensus       400 NGY~Lat~add~~V~lwDLRKl~n~kt~----------------------------------------------------  427 (506)
T KOG0289|consen  400 NGYWLATAADDGSVKLWDLRKLKNFKTI----------------------------------------------------  427 (506)
T ss_pred             CceEEEEEecCCeEEEEEehhhccccee----------------------------------------------------
Confidence            87 4777777777777777643322111                                                    


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC--CCeEEEeecCCcceEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR--IGKFITTLRGHVQAVY  506 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~--~~~~~~~~~~h~~~v~  506 (573)
                                                 .......+.++.|.+.|++|+.++.|=.|++++-.  ...++..+..|.+..+
T Consensus       428 ---------------------------~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st  480 (506)
T KOG0289|consen  428 ---------------------------QLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLST  480 (506)
T ss_pred             ---------------------------eccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccc
Confidence                                       11112358899999999999999888777777744  4566778888888899


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      .+.|..+.++++++|.|..++++.+
T Consensus       481 ~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  481 GVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eeeecccceEEeeccchhheEEeec
Confidence            9999999999999999999988754

>KOG2048|consensus

Probab=99.97  E-value=5.8e-27  Score=225.29  Aligned_cols=362  Identities=19%  Similarity=0.321  Sum_probs=270.5

Q ss_pred             cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEecee
Q psy2671         110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA  189 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (573)
                      ..+|.|+||+.+.+.||.+-.||.|.||++...-..                                            
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~--------------------------------------------   60 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFL--------------------------------------------   60 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCcee--------------------------------------------
Confidence            457999999999999999999999999998753111                                            


Q ss_pred             eEEEeeccccccCCCCC-CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         190 VFQVRPVTRCTSSMPGH-AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       190 ~~~~~~~~~~~~~~~gh-~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                ...+.|| .+.|-+++|++.+ .|++.+.+|.|.-||+.++++++......+.|.+++.+|.+..++.|+
T Consensus        61 ----------~~vi~g~~drsIE~L~W~e~~-RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~Igc  129 (691)
T KOG2048|consen   61 ----------EPVIHGPEDRSIESLAWAEGG-RLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGC  129 (691)
T ss_pred             ----------eEEEecCCCCceeeEEEccCC-eEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeec
Confidence                      1112233 4578999999555 688999999999999999999999999999999999999999999999


Q ss_pred             eCCeEEEEECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec----C----CC
Q psy2671         269 KNGVIHAWDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT----S----HT  339 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~----~----h~  339 (573)
                      .||.+...+...++.... .+.-.++.|.++.|.|     ++..+++|+.||.||+||...+..+....    +    ..
T Consensus       130 ddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~-----~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~  204 (691)
T KOG2048|consen  130 DDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNP-----TGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREP  204 (691)
T ss_pred             CCceEEEEecCCceEEEEeecccccceEEEEEecC-----CccEEEecccCceEEEEEcCCCceEEEeeecccccccCCc
Confidence            999888888877765433 2334567899999987     45679999999999999999887766322    1    22


Q ss_pred             ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       340 ~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .-|.++.+-.++.|++|..-|+|.+||...|.+++...-|...|.+++.+.                             
T Consensus       205 ~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~-----------------------------  255 (691)
T KOG2048|consen  205 TIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVAD-----------------------------  255 (691)
T ss_pred             eEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcC-----------------------------
Confidence            346677777889999999999999999999999999999988888887763                             


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc---ceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-----
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK---SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-----  491 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-----  491 (573)
                              +++++++++.|+.+..+...+.+.   .......|...|.+++..++  .|.+|+.|.++.+--.+.     
T Consensus       256 --------~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~  325 (691)
T KOG2048|consen  256 --------NEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMD  325 (691)
T ss_pred             --------CCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchh
Confidence                    357888888998888877665533   22334456677888887766  677777776655432111     


Q ss_pred             -------------------------------------C----e----EEE--eecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671         492 -------------------------------------G----K----FIT--TLRGHVQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       492 -------------------------------------~----~----~~~--~~~~h~~~v~~v~~s~dg~~las~s~D~  524 (573)
                                                           .    +    .+.  .++ ....|.+.+.||||+++|.+.- .
T Consensus       326 h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k-~~~nIs~~aiSPdg~~Ia~st~-~  403 (691)
T KOG2048|consen  326 HRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTK-EKENISCAAISPDGNLIAISTV-S  403 (691)
T ss_pred             hhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecC-CccceeeeccCCCCCEEEEeec-c
Confidence                                                 0    0    000  011 1245788999999999998762 2


Q ss_pred             cEEEEeCCc--------------------------------------------------ccccccc--cCcCCCEEEEEE
Q psy2671         525 TLKVWNMKT--------------------------------------------------KKIEQDL--PGHGDEVYAVDW  552 (573)
Q Consensus       525 ~v~vwd~~~--------------------------------------------------~~~~~~l--~~h~~~v~~~~~  552 (573)
                      .+++|.++.                                                  ++.+..+  .+....|..+.-
T Consensus       404 ~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~  483 (691)
T KOG2048|consen  404 RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVV  483 (691)
T ss_pred             ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEE
Confidence            345554432                                                  0000001  123457899999


Q ss_pred             ccCCCEEEEeeCCCcEEEcc
Q psy2671         553 APDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       553 s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ||+|+|||..+.++.|.+|+
T Consensus       484 SsdG~yiaa~~t~g~I~v~n  503 (691)
T KOG2048|consen  484 SSDGNYIAAISTRGQIFVYN  503 (691)
T ss_pred             cCCCCEEEEEeccceEEEEE
Confidence            99999999999999999996

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.8e-27  Score=238.59  Aligned_cols=268  Identities=17%  Similarity=0.278  Sum_probs=207.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-------------EEecCCCCcEEEEEEcC-CCCeEEEEeeC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-------------FKCEGHKHWVLCIAWSP-DSKQLVSGCKN  270 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-------------~~~~~h~~~V~~v~~s~-dg~~l~sgs~d  270 (573)
                      .|-..|....+++++..+++++.+.....|+...+..+             ..+.+|.+.|.+++|+| ++++|++|+.|
T Consensus        18 ~~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D   97 (493)
T PTZ00421         18 RHFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED   97 (493)
T ss_pred             cceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC
Confidence            34566777778888877888888888888876544322             23678999999999999 88899999999


Q ss_pred             CeEEEEECCCCce------ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671         271 GVIHAWDSSTGKQ------IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       271 g~i~vwd~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  344 (573)
                      ++|++||+.++..      ....+.+|...|.++.|.|.    ..+.|++++.|++|++||+.+++....+.+|...|.+
T Consensus        98 gtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~----~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~s  173 (493)
T PTZ00421         98 GTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPS----AMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITS  173 (493)
T ss_pred             CEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcC----CCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEE
Confidence            9999999976531      12346789999999999873    2358999999999999999999998899999999999


Q ss_pred             EEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceee-EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN-TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       345 ~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ++|++++ .+++++.|++|++||++++..+..+.+|..... .+.+                                  
T Consensus       174 la~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w----------------------------------  219 (493)
T PTZ00421        174 LEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW----------------------------------  219 (493)
T ss_pred             EEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE----------------------------------
Confidence            9999887 689999999999999999988888877764321 1111                                  


Q ss_pred             eeeCCCCcEEEEEe----CCCeEEEEcCCCCccceeeeccc-cccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEE
Q psy2671         423 QAQCPEGEKLVSGS----DDFTLFLWNPEKEKKSLARMTGH-QQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       423 ~~~~~~~~~l~sg~----~dg~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~  496 (573)
                         .+++..+++++    .|++|++||+++....+.....+ ...+....|++++++|++|+ .|+.|++||+..++.+.
T Consensus       220 ---~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~  296 (493)
T PTZ00421        220 ---AKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTF  296 (493)
T ss_pred             ---cCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEE
Confidence               13344555443    58999999998765555443323 33456678999999999887 49999999999988776


Q ss_pred             eecC-CcceEEEEEECCC
Q psy2671         497 TLRG-HVQAVYMVAWSSD  513 (573)
Q Consensus       497 ~~~~-h~~~v~~v~~s~d  513 (573)
                      .... +..++..++|.|.
T Consensus       297 ~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        297 CSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             EeeccCCCCCcceEeccc
Confidence            5543 3445677788875

>KOG0772|consensus

Probab=99.97  E-value=2.8e-28  Score=226.82  Aligned_cols=295  Identities=24%  Similarity=0.409  Sum_probs=220.9

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +.-.|++|+..|+++++.|.|..++|||+|-+|++||+.....-..                                  
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~----------------------------------  204 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMR----------------------------------  204 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccch----------------------------------
Confidence            3456889999999999999999999999999999999875421100                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee------------EEecCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL------------FKCEGHK  249 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~------------~~~~~h~  249 (573)
                              .|+        ...+.-...|.+++|||.|..|++.++....+|+|-...+..            ..-+||.
T Consensus       205 --------~fr--------~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHi  268 (641)
T KOG0772|consen  205 --------SFR--------QLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHI  268 (641)
T ss_pred             --------hhh--------ccCcccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCce
Confidence                    000        011223457899999999999999999999999996543322            2336899


Q ss_pred             CcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceeccc-----ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEE
Q psy2671         250 HWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQP-----MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI  323 (573)
Q Consensus       250 ~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~-----~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~i  323 (573)
                      ..++|.+|+|+.+ .++|++.||++++||++..+...+.     ..+.+-.++.++|+|     ++..+|+|..||.|.+
T Consensus       269 a~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr-----dg~~iAagc~DGSIQ~  343 (641)
T KOG0772|consen  269 AELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR-----DGKLIAAGCLDGSIQI  343 (641)
T ss_pred             eeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC-----CcchhhhcccCCceee
Confidence            9999999999764 6889999999999999876543222     234455788888876     6788999999999999


Q ss_pred             EECCCCe---EEEEecCCCc--cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         324 WDVILSQ---CVRVLTSHTR--SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       324 wd~~~~~---~~~~~~~h~~--~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      |+.....   ....-..|..  .|+|+.|+.+| .|++-+.|+++++||++.-                           
T Consensus       344 W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~---------------------------  396 (641)
T KOG0772|consen  344 WDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF---------------------------  396 (641)
T ss_pred             eecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc---------------------------
Confidence            9974321   2233456776  78888888776 5777777777777776642                           


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc--ccccEEEEEECCCCCEE
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINCVEFSPDGRII  475 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~sp~g~~l  475 (573)
                                                                          ++++....+  ....-+.++|||+.++|
T Consensus       397 ----------------------------------------------------kkpL~~~tgL~t~~~~tdc~FSPd~kli  424 (641)
T KOG0772|consen  397 ----------------------------------------------------KKPLNVRTGLPTPFPGTDCCFSPDDKLI  424 (641)
T ss_pred             ----------------------------------------------------ccchhhhcCCCccCCCCccccCCCceEE
Confidence                                                                111111111  01123567999999999


Q ss_pred             EEeeC------CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         476 ASASF------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       476 as~s~------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ++|..      .|++.+||..+.+.+..+.-....|..+.|+|.=+.|..|+.||++++|-
T Consensus       425 ~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY  485 (641)
T KOG0772|consen  425 LTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY  485 (641)
T ss_pred             EecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence            99853      57899999999999988877778899999999888888899999999884

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=4e-27  Score=236.09  Aligned_cols=278  Identities=19%  Similarity=0.284  Sum_probs=204.4

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      |-..|....+++++..+++++.+..+..|+...+..+......                     +..             
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~---------------------G~~-------------   64 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDY---------------------GKL-------------   64 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeecccc---------------------ccC-------------
Confidence            5556777778889888999999999999997665432111000                     000             


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCC
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~d  260 (573)
                              ......+.||.+.|++++|+| ++++|++|+.|++|++||+.++       .++..+.+|...|.+++|+|+
T Consensus        65 --------~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~  136 (493)
T PTZ00421         65 --------ASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPS  136 (493)
T ss_pred             --------CCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcC
Confidence                    000123569999999999999 8899999999999999999764       356778999999999999998


Q ss_pred             C-CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         261 S-KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       261 g-~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      + ++|++|+.|++|++||++++..+ ..+.+|...|.+++|+|     ++..|++++.|++|++||+++++.+..+.+|.
T Consensus       137 ~~~iLaSgs~DgtVrIWDl~tg~~~-~~l~~h~~~V~sla~sp-----dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~  210 (493)
T PTZ00421        137 AMNVLASAGADMVVNVWDVERGKAV-EVIKCHSDQITSLEWNL-----DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHA  210 (493)
T ss_pred             CCCEEEEEeCCCEEEEEECCCCeEE-EEEcCCCCceEEEEEEC-----CCCEEEEecCCCEEEEEECCCCcEEEEEecCC
Confidence            6 68999999999999999988754 45678999999999987     56789999999999999999999888888887


Q ss_pred             ccE-EEEEECCC-cEEEEEe----CCCeEEEEeCCCCee-eEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         340 RSV-TCIRWGGS-GLIYSAS----QDRTIKVWRASDGVM-CRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       340 ~~v-~~~~~~~~-~~l~s~s----~d~~i~vw~~~~~~~-~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      ..+ ..+.|.++ +.+++++    .|+.|++||+++... ......+.. .+.                           
T Consensus       211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~---------------------------  263 (493)
T PTZ00421        211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALF---------------------------  263 (493)
T ss_pred             CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceE---------------------------
Confidence            653 45667655 4566544    589999999876432 211111110 000                           


Q ss_pred             hhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCC
Q psy2671         412 EESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~  471 (573)
                                .....+++.++++++ .|+.|++||+.++.........+..++..++|.|.
T Consensus       264 ----------~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        264 ----------IPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             ----------EEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence                      011236677888777 59999999998765433322335556778888884

>KOG0647|consensus

Probab=99.96  E-value=8.5e-28  Score=209.48  Aligned_cols=270  Identities=19%  Similarity=0.291  Sum_probs=214.2

Q ss_pred             CCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCC-CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEE
Q psy2671         247 GHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW  324 (573)
Q Consensus       247 ~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iw  324 (573)
                      ...+.|.+|+||| ....++.||+||+||+|+++. |....+....|.++|.+++|..     ++..+.+|+.|+.+++|
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-----dgskVf~g~~Dk~~k~w   99 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-----DGSKVFSGGCDKQAKLW   99 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-----CCceEEeeccCCceEEE
Confidence            4567799999999 555677999999999999987 5666666778999999999964     67789999999999999


Q ss_pred             ECCCCeEEEEecCCCccEEEEEECCC-c--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         325 DVILSQCVRVLTSHTRSVTCIRWGGS-G--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       325 d~~~~~~~~~~~~h~~~v~~~~~~~~-~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      |+.+++ +..+..|..+|.++.|-+. +  .|+|||+|.+||.||.+....+.+++-.. .++++               
T Consensus       100 DL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe-RvYa~---------------  162 (347)
T KOG0647|consen  100 DLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE-RVYAA---------------  162 (347)
T ss_pred             EccCCC-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc-eeeeh---------------
Confidence            999984 5677889999999999543 2  68999999999999998766554443110 01100               


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEEEeeC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~s~  480 (573)
                                              .-...+++.+..++.|.+|++++......+.. .-.-.++||+.-+|....|.|+-
T Consensus       163 ------------------------Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsi  218 (347)
T KOG0647|consen  163 ------------------------DVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSI  218 (347)
T ss_pred             ------------------------hccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeee
Confidence                                    01135788899999999999977644333322 12335889999999888899999


Q ss_pred             CCcEEEEeCCCC--eEEEeecCCc---------ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEE
Q psy2671         481 DKSIKLWDGRIG--KFITTLRGHV---------QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA  549 (573)
Q Consensus       481 dg~i~lwd~~~~--~~~~~~~~h~---------~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~  549 (573)
                      +|.+.+..+..+  +.-.+|+.|.         ..|++++|+|.-..|+|++.||+..+||-.....++..+.|..+|++
T Consensus       219 EGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItc  298 (347)
T KOG0647|consen  219 EGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITC  298 (347)
T ss_pred             cceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccce
Confidence            999999877665  4445666664         25788999999889999999999999999888888888899999999


Q ss_pred             EEEccCCCEEEEe
Q psy2671         550 VDWAPDGEKVASG  562 (573)
Q Consensus       550 ~~~s~d~~~l~s~  562 (573)
                      ..|+.+|.++|-+
T Consensus       299 c~fn~~G~ifaYA  311 (347)
T KOG0647|consen  299 CSFNRNGSIFAYA  311 (347)
T ss_pred             eEecCCCCEEEEE
Confidence            9999999998754

>KOG1408|consensus

Probab=99.96  E-value=7.1e-28  Score=232.10  Aligned_cols=332  Identities=25%  Similarity=0.370  Sum_probs=243.8

Q ss_pred             EEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEE
Q psy2671         114 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQV  193 (573)
Q Consensus       114 ~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (573)
                      .++.|.+...+|...-.|..+.|||+.+-+.+.++                                             
T Consensus       328 IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~---------------------------------------------  362 (1080)
T KOG1408|consen  328 IACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKC---------------------------------------------  362 (1080)
T ss_pred             eEEEecCCCceEEEEEcCceEEEEeccccccccce---------------------------------------------
Confidence            36678888889988889999999999764432211                                             


Q ss_pred             eeccccccCCCCCCCcEEEEEEcC------------CCCeEEEEeCCCeEEEEECCCCee--e--------------E--
Q psy2671         194 RPVTRCTSSMPGHAEAVISVKFSP------------NGRSLASGSGDTTVRFWDVTTQTP--L--------------F--  243 (573)
Q Consensus       194 ~~~~~~~~~~~gh~~~V~~~~fsp------------~g~~las~s~d~~i~iwd~~~~~~--~--------------~--  243 (573)
                             ..+.-|...|+.+.--|            .+ -+.+++.|++||+||+..+..  +              +  
T Consensus       363 -------~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~-cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d  434 (1080)
T KOG1408|consen  363 -------SSMLYHSACIWDVENLPCNVHSPTAACLPRG-CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYED  434 (1080)
T ss_pred             -------eeeeeccceeeeeccccccccCcccccCCcc-ceeEecCCCcEEEeecccccccceeecccchhhhhcCcccc
Confidence                   11122444444443322            23 378999999999999865210  0              0  


Q ss_pred             -------------------EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         244 -------------------KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       244 -------------------~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                                         ..-+.+-.+++++.||+|++||+|..-|.++||++..-... ..+.+|...|.++.|.-..
T Consensus       435 ~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~-~~~eAHesEilcLeyS~p~  513 (1080)
T KOG1408|consen  435 STQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYT-CFMEAHESEILCLEYSFPV  513 (1080)
T ss_pred             CchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhh-hheecccceeEEEeecCch
Confidence                               00123456999999999999999999999999998765433 3567899999999986433


Q ss_pred             cCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCc---EEEEEeCCCeEEEEeCCCCeeeEeccCCc
Q psy2671         305 LNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG---LIYSASQDRTIKVWRASDGVMCRTLEGHA  380 (573)
Q Consensus       305 ~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i~vw~~~~~~~~~~~~~~~  380 (573)
                      .  ..++|++++.|+.|++||.... .++.++.+|...|+++.|..++   .+++++.|+.|.+--.........+..|.
T Consensus       514 ~--~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t  591 (1080)
T KOG1408|consen  514 L--TNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHT  591 (1080)
T ss_pred             h--hhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccc
Confidence            2  2367999999999999998654 5667899999999999997655   58899999987643222111011111111


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc--eeeecc
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS--LARMTG  458 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~--~~~~~~  458 (573)
                      +-+                 ...-.|               .+...|..+++++++.|+.|++|++++++..  ++--.+
T Consensus       592 ~t~-----------------~ktTlY---------------Dm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~  639 (1080)
T KOG1408|consen  592 QTL-----------------SKTTLY---------------DMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRD  639 (1080)
T ss_pred             ccc-----------------ccceEE---------------EeeeCCCcceEEEEecccceEEEeccccceeeeeccccc
Confidence            100                 000001               1123367789999999999999999987642  223345


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      |.+..-.|...|.|-+||+.+.|+++.++|.-+|+++....||...|+.+.|++|.++|++.+.||.|.||.+..
T Consensus       640 ~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  640 HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             CCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence            667778899999999999999999999999999999999999999999999999999999999999999998854

>KOG2096|consensus

Probab=99.96  E-value=2e-27  Score=208.41  Aligned_cols=293  Identities=23%  Similarity=0.356  Sum_probs=203.1

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee-----eE-Ee-cCCCCcEEEEEEcCCCCeEEEEe-eCCe
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP-----LF-KC-EGHKHWVLCIAWSPDSKQLVSGC-KNGV  272 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~-----~~-~~-~~h~~~V~~v~~s~dg~~l~sgs-~dg~  272 (573)
                      ..+.||.+.|++++||.||+.|||+++|++|+||+++....     +. .+ .+|   -+.++|+||-+-++... ...+
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dh---pT~V~FapDc~s~vv~~~~g~~  156 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDH---PTRVVFAPDCKSVVVSVKRGNK  156 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCC---ceEEEECCCcceEEEEEccCCE
Confidence            56789999999999999999999999999999999876321     11 11 123   47789999988665544 4557


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-  351 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-  351 (573)
                      +++|.....+.      | ......+                        -||-     ...-..|...+..+-..+++ 
T Consensus       157 l~vyk~~K~~d------G-~~~~~~v------------------------~~D~-----~~f~~kh~v~~i~iGiA~~~k  200 (420)
T KOG2096|consen  157 LCVYKLVKKTD------G-SGSHHFV------------------------HIDN-----LEFERKHQVDIINIGIAGNAK  200 (420)
T ss_pred             EEEEEeeeccc------C-CCCcccc------------------------cccc-----cccchhcccceEEEeecCCce
Confidence            88886532211      0 0000000                        0120     01112244444444444544 


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                      .|++++.|..|.+|+++ |+.+..+.......+                                     ..+.+|+|.+
T Consensus       201 ~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~-------------------------------------~aavSP~GRF  242 (420)
T KOG2096|consen  201 YIMSASLDTKICLWDLK-GQLLQSIDTNQSSNY-------------------------------------DAAVSPDGRF  242 (420)
T ss_pred             EEEEecCCCcEEEEecC-Cceeeeecccccccc-------------------------------------ceeeCCCCcE
Confidence            68999999999999998 766655543222111                                     1234688999


Q ss_pred             EEEEeCCCeEEEEcCCCC-------ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------eEEEe
Q psy2671         432 LVSGSDDFTLFLWNPEKE-------KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-------KFITT  497 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~-------~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-------~~~~~  497 (573)
                      +++++-.--+++|.+--.       -.....+.||+..|...+|||+...+++.|.||++++||..-.       +.+.+
T Consensus       243 ia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~  322 (420)
T KOG2096|consen  243 IAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKE  322 (420)
T ss_pred             EEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhc
Confidence            999999999999985311       1224567899999999999999999999999999999996531       22222


Q ss_pred             ec----CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         498 LR----GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       498 ~~----~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..    .-.+.-..++.||.|+.||.+. -..+++|..+.++.+..+ ..|...|.+++|+++|++++|+| |+.+++..
T Consensus       323 g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  323 GSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             CCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            21    1122234799999999998664 457999999888766544 35889999999999999999998 66677654

>KOG2048|consensus

Probab=99.96  E-value=9.4e-26  Score=217.04  Aligned_cols=407  Identities=18%  Similarity=0.328  Sum_probs=273.8

Q ss_pred             ccccCCCccc-cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         102 CTSSMPGHAE-AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       102 ~~~~~~gH~~-~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      +...+.||++ .|.+++|+ ++..|.|.+.+|.|.-||+.++++++..                                
T Consensus        60 ~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~--------------------------------  106 (691)
T KOG2048|consen   60 LEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNI--------------------------------  106 (691)
T ss_pred             eeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEe--------------------------------
Confidence            3445666655 79999999 5677889999999999999988765432                                


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE--ecCCCCcEEEEEEc
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAWS  258 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~s  258 (573)
                                             ....+.|++++.+|.+..++.|+.||.+.+.+...++..+.  +...++.|.+++|+
T Consensus       107 -----------------------d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~  163 (691)
T KOG2048|consen  107 -----------------------DSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWN  163 (691)
T ss_pred             -----------------------cCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEec
Confidence                                   12357899999999999999999999888888877765443  34456889999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecc---cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQ---PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  335 (573)
                      |++..|++|+.||.|++||+..+..+..   .+.+-...=..+.|....+  ....+++|...|+|++||...+..++.+
T Consensus       164 ~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L--rd~tI~sgDS~G~V~FWd~~~gTLiqS~  241 (691)
T KOG2048|consen  164 PTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL--RDSTIASGDSAGTVTFWDSIFGTLIQSH  241 (691)
T ss_pred             CCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEe--ecCcEEEecCCceEEEEcccCcchhhhh
Confidence            9999999999999999999998865430   0111111112233333223  2357999999999999999999999999


Q ss_pred             cCCCccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCe----eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         336 TSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGV----MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       336 ~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      ..|...|.|++..++ ..+++++.|+.|..+...++.    .......|.+.+.+++...+...  ....+..+...+..
T Consensus       242 ~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~--sgG~d~~l~i~~s~  319 (691)
T KOG2048|consen  242 SCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALI--SGGRDFTLAICSSR  319 (691)
T ss_pred             hhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEE--ecceeeEEEEcccc
Confidence            999999999999887 589999999999988876653    23345788899999988766221  11111111111100


Q ss_pred             chhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE--------cCCCC--------ccceeeeccccccEEEEEECCCCCE
Q psy2671         411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW--------NPEKE--------KKSLARMTGHQQLINCVEFSPDGRI  474 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw--------d~~~~--------~~~~~~~~~h~~~v~~v~~sp~g~~  474 (573)
                      ......+.   .....|.+..++++..+..+.+|        .+.+.        ...+.........|.|.+.||+|++
T Consensus       320 ~~~~~~h~---~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~  396 (691)
T KOG2048|consen  320 EFKNMDHR---QKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNL  396 (691)
T ss_pred             ccCchhhh---ccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCE
Confidence            00000000   11112344444555555555555        33221        1122222333456899999999999


Q ss_pred             EEEeeCCCcEEEEeCCC------------------------------------------------C--eEEEee--cCCc
Q psy2671         475 IASASFDKSIKLWDGRI------------------------------------------------G--KFITTL--RGHV  502 (573)
Q Consensus       475 las~s~dg~i~lwd~~~------------------------------------------------~--~~~~~~--~~h~  502 (573)
                      ||.+.-. ..++|.++.                                                .  +.+..+  ++..
T Consensus       397 Ia~st~~-~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~  475 (691)
T KOG2048|consen  397 IAISTVS-RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKC  475 (691)
T ss_pred             EEEeecc-ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCC
Confidence            9987621 233332211                                                0  000000  1123


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d~~i~iw~  572 (573)
                      ..|+.++.||||++||+.+.++.|.+|++.+++.......-...|+++.|+| +...|+.+..++.+.-|+
T Consensus       476 ~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~nQv~efd  546 (691)
T KOG2048|consen  476 PSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSNNQVFEFD  546 (691)
T ss_pred             CcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecCCeEEEEe
Confidence            4688899999999999999999999999988765333323346899999995 556788888898887664

>KOG0640|consensus

Probab=99.96  E-value=1.1e-27  Score=209.31  Aligned_cols=286  Identities=22%  Similarity=0.384  Sum_probs=220.8

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-----------------C-eeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-----------------Q-TPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-----------------~-~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                      +..|..++.+.+|||||.++|+||.|-.|+|.|+..                 + ..+.++..|...|+++.|+|....|
T Consensus       108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~IL  187 (430)
T KOG0640|consen  108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETIL  187 (430)
T ss_pred             EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheE
Confidence            457999999999999999999999999999999751                 1 2356778899999999999999999


Q ss_pred             EEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCc
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL---TSHTR  340 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~h~~  340 (573)
                      ++|+.|++|+++|........ .........|.++.|.|     .|++++.|..-.++|+||+.+.++....   ..|++
T Consensus       188 iS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP-----sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~  262 (430)
T KOG0640|consen  188 ISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP-----SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTG  262 (430)
T ss_pred             EeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC-----CCceEEEecCCCceeEEeccceeEeeecCccccccc
Confidence            999999999999986432110 01112345788999887     5788999999999999999998876543   36888


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|+++.+++.+ +.++||.||.|++||--.++++.++.                                          
T Consensus       263 ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~------------------------------------------  300 (430)
T KOG0640|consen  263 AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG------------------------------------------  300 (430)
T ss_pred             ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHH------------------------------------------
Confidence            88888888776 45677888888888744433322221                                          


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc-ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ-QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~-~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                                                           ..|. ..|.+..|+.+|++|++.+.|..+++|.+.+++.+...
T Consensus       301 -------------------------------------~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Y  343 (430)
T KOG0640|consen  301 -------------------------------------NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEY  343 (430)
T ss_pred             -------------------------------------hhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEE
Confidence                                                 1222 35888999999999999999999999999999988877


Q ss_pred             cCCc-----ceEEEEEECCCCCEEEEEe-CCCcEEEEeCCcccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         499 RGHV-----QAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       499 ~~h~-----~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .|-.     .--+...|.....+++.-. ..+.+.-||.++...+..+ .||++.+..+.-||.+.-+.+||.|..+|+|
T Consensus       344 tGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFW  423 (430)
T KOG0640|consen  344 TGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFW  423 (430)
T ss_pred             ecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeee
Confidence            5431     1123345666666665433 3466899999887654433 4899999999999999999999999999999


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      -
T Consensus       424 y  424 (430)
T KOG0640|consen  424 Y  424 (430)
T ss_pred             e
Confidence            4

>KOG0268|consensus

Probab=99.96  E-value=5.7e-29  Score=221.80  Aligned_cols=288  Identities=22%  Similarity=0.368  Sum_probs=218.2

Q ss_pred             cccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         103 TSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ...|.||.+.|.|++=+|.. ..+|||+.||.|+|||+....+                                     
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~-------------------------------------  101 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQREC-------------------------------------  101 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhh-------------------------------------
Confidence            45678999999999999987 7899999999999999976543                                     


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                        ..++..|.+.|..+++..  ..+++++.|.+|+.|.+.. .++.++.+. ..+..+.-+..+
T Consensus       102 ------------------~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~tilg~-s~~~gIdh~~~~  159 (433)
T KOG0268|consen  102 ------------------IRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTILGK-SVYLGIDHHRKN  159 (433)
T ss_pred             ------------------hheeecccCceeeEEecc--cceEEecCCcceeeeeccC-Ccceeeecc-cccccccccccc
Confidence                              345668999999999987  5689999999999999765 355554443 345566655566


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      ..++|++.  .|.+||.....++.. +.--.+.|.++.|+|..    ...|++++.|+.|.+||+++..+++.+.. ...
T Consensus       160 ~~FaTcGe--~i~IWD~~R~~Pv~s-mswG~Dti~svkfNpvE----TsILas~~sDrsIvLyD~R~~~Pl~KVi~-~mR  231 (433)
T KOG0268|consen  160 SVFATCGE--QIDIWDEQRDNPVSS-MSWGADSISSVKFNPVE----TSILASCASDRSIVLYDLRQASPLKKVIL-TMR  231 (433)
T ss_pred             ccccccCc--eeeecccccCCccce-eecCCCceeEEecCCCc----chheeeeccCCceEEEecccCCccceeee-ecc
Confidence            67888775  489999876554432 23334568889988853    34789999999999999999888765432 223


Q ss_pred             EEEEEECCCcE-EEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         342 VTCIRWGGSGL-IYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       342 v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      -+.++|+|.+. +.+|+.|..+..+|++.- ..+....+|...|..+.++                              
T Consensus       232 TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfs------------------------------  281 (433)
T KOG0268|consen  232 TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFS------------------------------  281 (433)
T ss_pred             ccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccC------------------------------
Confidence            46789999774 677889999999998753 3455667777777777665                              


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF  494 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~  494 (573)
                             |.|.-+++||.|++|+||....+...-.-...--+.|.||.||.|.+++++||.|+.|++|.....+.
T Consensus       282 -------ptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek  349 (433)
T KOG0268|consen  282 -------PTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK  349 (433)
T ss_pred             -------CCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence                   66889999999999999998754321100011123499999999999999999999999998765443

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=1.4e-26  Score=232.92  Aligned_cols=251  Identities=20%  Similarity=0.349  Sum_probs=189.7

Q ss_pred             EeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC-CCeEEEEeeCCeEEEEECCCCcee-------cccccCCcccEE
Q psy2671         225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-SKQLVSGCKNGVIHAWDSSTGKQI-------GQPMRGHKQWIT  296 (573)
Q Consensus       225 ~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~~~-------~~~~~~h~~~v~  296 (573)
                      |+.++.|++|+.....++..+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+.++...       ...+.+|...|.
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~  129 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS  129 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence            567899999998887888889999999999999996 789999999999999999764321       123578999999


Q ss_pred             EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEe
Q psy2671         297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~  375 (573)
                      +++|+|..    ...+++++.|++|++||+.+++....+. |...|.++.|+++| .+++++.|+.|++||++++..+.+
T Consensus       130 sVaf~P~g----~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~t  204 (568)
T PTZ00420        130 IIDWNPMN----YYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASS  204 (568)
T ss_pred             EEEECCCC----CeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEE
Confidence            99998832    2356799999999999999888766665 56789999999887 566778899999999888776665


Q ss_pred             ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671         376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                      +.+|...+..                                                                      
T Consensus       205 l~gH~g~~~s----------------------------------------------------------------------  214 (568)
T PTZ00420        205 FHIHDGGKNT----------------------------------------------------------------------  214 (568)
T ss_pred             EecccCCcee----------------------------------------------------------------------
Confidence            5555321100                                                                      


Q ss_pred             eccccccEEEEEECCCCCEEEEeeCCC----cEEEEeCCC-CeEEEee--cCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671         456 MTGHQQLINCVEFSPDGRIIASASFDK----SIKLWDGRI-GKFITTL--RGHVQAVYMVAWSSDSRLLVSGSADSTLKV  528 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~g~~las~s~dg----~i~lwd~~~-~~~~~~~--~~h~~~v~~v~~s~dg~~las~s~D~~v~v  528 (573)
                           ..+....|++++.+|++++.|+    .|+|||++. .+.+..+  ..+...+...-..++|.++++|+.|++|++
T Consensus       215 -----~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~  289 (568)
T PTZ00420        215 -----KNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRY  289 (568)
T ss_pred             -----EEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEE
Confidence                 1123345778889999888774    799999985 4555443  333344444445667999999999999999


Q ss_pred             EeCCccccc--ccccCcCCCEEEEEEccCC
Q psy2671         529 WNMKTKKIE--QDLPGHGDEVYAVDWAPDG  556 (573)
Q Consensus       529 wd~~~~~~~--~~l~~h~~~v~~~~~s~d~  556 (573)
                      |++..+...  .... +..++.+++|.|+.
T Consensus       290 ~e~~~~~~~~l~~~~-s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        290 YQHSLGSIRKVNEYK-SCSPFRSFGFLPKQ  318 (568)
T ss_pred             EEccCCcEEeecccc-cCCCccceEEcccc
Confidence            999776432  2222 55678889999964

>KOG0308|consensus

Probab=99.96  E-value=1.4e-28  Score=235.07  Aligned_cols=271  Identities=23%  Similarity=0.452  Sum_probs=215.2

Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCcee-----cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--eE
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQI-----GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--QC  331 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~  331 (573)
                      |.+++|+||++||.|++|+.......     ...+..|.+||..+.     +..+++.|+++|.|-+|++|+....  -+
T Consensus        35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDii-----L~~~~~tlIS~SsDtTVK~W~~~~~~~~c  109 (735)
T KOG0308|consen   35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDII-----LCGNGKTLISASSDTTVKVWNAHKDNTFC  109 (735)
T ss_pred             CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHH-----hhcCCCceEEecCCceEEEeecccCcchh
Confidence            46778999999999999998654321     234567899988765     3346778999999999999999877  67


Q ss_pred             EEEecCCCccEEEEEE-CCCc-EEEEEeCCCeEEEEeCCCCee--eE--------ecc-CCcceeeEEEeccCceeEEEE
Q psy2671         332 VRVLTSHTRSVTCIRW-GGSG-LIYSASQDRTIKVWRASDGVM--CR--------TLE-GHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       332 ~~~~~~h~~~v~~~~~-~~~~-~l~s~s~d~~i~vw~~~~~~~--~~--------~~~-~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      ..++..|..-|.|++. ..+. .+++|+.|+.|.+||++++..  +.        .+. |+...|++++.+         
T Consensus       110 ~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N---------  180 (735)
T KOG0308|consen  110 MSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN---------  180 (735)
T ss_pred             HhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC---------
Confidence            8889999999999998 4443 789999999999999997732  11        111 444444444433         


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~  478 (573)
                                                  +.|..+++|+..+.+++||+++.++ ...+.||.+.|.++..++||..++++
T Consensus       181 ----------------------------~t~t~ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~  231 (735)
T KOG0308|consen  181 ----------------------------QTGTIIVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSA  231 (735)
T ss_pred             ----------------------------CcceEEEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeec
Confidence                                        4577899999999999999998765 44566999999999999999999999


Q ss_pred             eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE
Q psy2671         479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK  558 (573)
Q Consensus       479 s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~  558 (573)
                      |.||+|++||+...+++.++..|...|+++..+|+=..+++|+.|+.|..=|+++......+.....+|..+..+.+.+.
T Consensus       232 sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~  311 (735)
T KOG0308|consen  232 SSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNS  311 (735)
T ss_pred             CCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCC
Confidence            99999999999999999999999999999999999999999999999999999874322222223345666666654455


Q ss_pred             EEEeeCCCcEEEcc
Q psy2671         559 VASGGKDKVLRLWQ  572 (573)
Q Consensus       559 l~s~~~d~~i~iw~  572 (573)
                      +-++..|+.|+-|.
T Consensus       312 ~WvtTtds~I~rW~  325 (735)
T KOG0308|consen  312 VWVTTTDSSIKRWK  325 (735)
T ss_pred             ceeeeccccceecC
Confidence            56677788888885

>KOG0647|consensus

Probab=99.96  E-value=1.8e-27  Score=207.45  Aligned_cols=278  Identities=18%  Similarity=0.298  Sum_probs=200.0

Q ss_pred             ccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccC-CcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         109 HAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT-QTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       109 H~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      .+|.|++|+||| ...+++.||.|++||+|+++. |....                                        
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~----------------------------------------   65 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP----------------------------------------   65 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccc----------------------------------------
Confidence            578999999999 566777999999999999975 22210                                        


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC--eE
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK--QL  264 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~--~l  264 (573)
                                    .....|.++|++++|+.||..+++|+.|+.+++||+.+++ +.....|.++|.++.|-+...  .|
T Consensus        66 --------------ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pvkt~~wv~~~~~~cl  130 (347)
T KOG0647|consen   66 --------------KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPVKTCHWVPGMNYQCL  130 (347)
T ss_pred             --------------hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC-eeeeeecccceeEEEEecCCCccee
Confidence                          1233589999999999999999999999999999999984 566788999999999977555  89


Q ss_pred             EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE-Ee-cCCCccE
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR-VL-TSHTRSV  342 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~-~~h~~~v  342 (573)
                      +|||+|.+|+.||.+....+....  -.+.++++..       .-.+++.+..++.|.+|++....... .. ..-.-.+
T Consensus       131 ~TGSWDKTlKfWD~R~~~pv~t~~--LPeRvYa~Dv-------~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~  201 (347)
T KOG0647|consen  131 VTGSWDKTLKFWDTRSSNPVATLQ--LPERVYAADV-------LYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQT  201 (347)
T ss_pred             EecccccceeecccCCCCeeeeee--ccceeeehhc-------cCceeEEEecCCcEEEEEcCCCcchhhhhcCccccee
Confidence            999999999999998766543211  1233444332       12367788889999999996543211 11 1112235


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeE--eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCR--TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      +|++...+. ..+.|+-.|.+.+..+..+....  +++-|..                  .                   
T Consensus       202 R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~------------------~-------------------  244 (347)
T KOG0647|consen  202 RCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRS------------------T-------------------  244 (347)
T ss_pred             eEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEecc------------------C-------------------
Confidence            666653332 34777777877776665432110  1111100                  0                   


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                               +                   .      ..+.-..|++|+|+|.-..|+++|.||++.+||.+....+.+.+
T Consensus       245 ---------~-------------------~------~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~  290 (347)
T KOG0647|consen  245 ---------N-------------------S------VNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSE  290 (347)
T ss_pred             ---------C-------------------C------CCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccC
Confidence                     0                   0      00012358899999998899999999999999988877788888


Q ss_pred             CCcceEEEEEECCCCCEEEEEe
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s  521 (573)
                      .|.++|++.+|+.+|.++|-+.
T Consensus       291 ~~~qpItcc~fn~~G~ifaYA~  312 (347)
T KOG0647|consen  291 THPQPITCCSFNRNGSIFAYAL  312 (347)
T ss_pred             cCCCccceeEecCCCCEEEEEe
Confidence            8999999999999999987553

>PTZ00420 coronin; Provisional

Probab=99.96  E-value=8.7e-27  Score=234.43  Aligned_cols=229  Identities=19%  Similarity=0.309  Sum_probs=169.5

Q ss_pred             CCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCCe--------eeEEecCCCCcEEEEEEcCCCCe-EEEEeeCC
Q psy2671         202 SMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQT--------PLFKCEGHKHWVLCIAWSPDSKQ-LVSGCKNG  271 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~~--------~~~~~~~h~~~V~~v~~s~dg~~-l~sgs~dg  271 (573)
                      .+.||.+.|.+++|+|+ +.+||+|+.|++|+|||+.++.        ++..+.+|...|.+++|+|++.. |++++.|+
T Consensus        69 ~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg  148 (568)
T PTZ00420         69 KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS  148 (568)
T ss_pred             EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence            35689999999999997 7899999999999999997532        34467899999999999999876 47899999


Q ss_pred             eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE-----
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR-----  346 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~-----  346 (573)
                      +|++||+++++.... + .|...|.++.|+|     ++..|++++.|+.|++||+++++.+..+.+|.+.+.+..     
T Consensus       149 tIrIWDl~tg~~~~~-i-~~~~~V~Slswsp-----dG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~  221 (568)
T PTZ00420        149 FVNIWDIENEKRAFQ-I-NMPKKLSSLKWNI-----KGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDG  221 (568)
T ss_pred             eEEEEECCCCcEEEE-E-ecCCcEEEEEECC-----CCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeee
Confidence            999999998875432 2 2556799999976     578899999999999999999999988999987654432     


Q ss_pred             ECCC-cEEEEEeCCC----eEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         347 WGGS-GLIYSASQDR----TIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       347 ~~~~-~~l~s~s~d~----~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |+++ +.+++++.|+    +|++||++. +..+.....+.. ...+...                               
T Consensus       222 fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~-~~~L~p~-------------------------------  269 (568)
T PTZ00420        222 LGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA-SAPLIPH-------------------------------  269 (568)
T ss_pred             EcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC-ccceEEe-------------------------------
Confidence            3344 4788877764    799999885 333332211110 0000000                               


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG  472 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g  472 (573)
                         ...+.+.++++|+.|++|++|++..+.........+..++.+++|.|..
T Consensus       270 ---~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        270 ---YDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             ---eeCCCCCEEEEEECCCeEEEEEccCCcEEeecccccCCCccceEEcccc
Confidence               0124578899999999999999876532111122355678899999964

>KOG1445|consensus

Probab=99.96  E-value=2.4e-27  Score=225.61  Aligned_cols=147  Identities=23%  Similarity=0.476  Sum_probs=119.5

Q ss_pred             CCCCcEEEE--EeCCCeEEEEcCCCCccce-eeecc--ccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC-------
Q psy2671         426 CPEGEKLVS--GSDDFTLFLWNPEKEKKSL-ARMTG--HQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIG-------  492 (573)
Q Consensus       426 ~~~~~~l~s--g~~dg~i~lwd~~~~~~~~-~~~~~--h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~-------  492 (573)
                      |.+..++|.  .+..|.|-+|+++...+.- ..+.+  ....|+.+.|.| |.+.||+++.||.|++|.+..+       
T Consensus       588 can~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~  667 (1012)
T KOG1445|consen  588 CANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEM  667 (1012)
T ss_pred             eeccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccC
Confidence            444455543  4557899999987654321 11111  234589999999 8889999999999999987643       


Q ss_pred             eEEEeecCCcceEEEEEECCC-CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         493 KFITTLRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~d-g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .....+.+|...|+++.|+|= ...||+++.|.+|++||+++.+....+.+|++.|.+++|||||+.+|+.+.||+|++|
T Consensus       668 tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy  747 (1012)
T KOG1445|consen  668 TPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVY  747 (1012)
T ss_pred             CcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEe
Confidence            234567889999999999993 4589999999999999999999999999999999999999999999999999999998


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      +
T Consensus       748 ~  748 (1012)
T KOG1445|consen  748 E  748 (1012)
T ss_pred             C
Confidence            5

>KOG0641|consensus

Probab=99.96  E-value=4.9e-26  Score=190.30  Aligned_cols=294  Identities=24%  Similarity=0.367  Sum_probs=228.1

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcce---eeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL---FKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY  185 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (573)
                      .++.|.+++|+|.|.+.|.||..++.||--+-.-..+   ++..                                   .
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~-----------------------------------~   75 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAA-----------------------------------K   75 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccc-----------------------------------c
Confidence            5678999999999999999999999998854211000   0000                                   0


Q ss_pred             eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee-----eEEecCCCCcEEEEEEcC-
Q psy2671         186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP-----LFKCEGHKHWVLCIAWSP-  259 (573)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~-----~~~~~~h~~~V~~v~~s~-  259 (573)
                      ++       +...| .....|.++|.|.+|||+|+.+|+|+.|.+|++-.+...+.     -.++.-|.+.|..++|-. 
T Consensus        76 ~p-------p~v~~-kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~  147 (350)
T KOG0641|consen   76 QP-------PSVLC-KRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDD  147 (350)
T ss_pred             CC-------CeEEe-eeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecC
Confidence            00       01111 12346899999999999999999999999999987654332     234567889999999953 


Q ss_pred             ---CCCeEEEEe-eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q psy2671         260 ---DSKQLVSGC-KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       260 ---dg~~l~sgs-~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  335 (573)
                         .|..|++++ .|..|.+-|..+|... ..+.||.+.|.++.      +-++-++++|+.|.+||+||++...++.++
T Consensus       148 ~~s~~~il~s~gagdc~iy~tdc~~g~~~-~a~sghtghilaly------swn~~m~~sgsqdktirfwdlrv~~~v~~l  220 (350)
T KOG0641|consen  148 PESGGAILASAGAGDCKIYITDCGRGQGF-HALSGHTGHILALY------SWNGAMFASGSQDKTIRFWDLRVNSCVNTL  220 (350)
T ss_pred             CCcCceEEEecCCCcceEEEeecCCCCcc-eeecCCcccEEEEE------EecCcEEEccCCCceEEEEeeeccceeeec
Confidence               345667654 4667777787777654 56789998887764      124568999999999999999998888876


Q ss_pred             cC--C-----CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         336 TS--H-----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       336 ~~--h-----~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      ..  |     ...|.+++..|.| .+++|-.|.+..+||++.+.+++.+..|...|+++.++                  
T Consensus       221 ~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfs------------------  282 (350)
T KOG0641|consen  221 DNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFS------------------  282 (350)
T ss_pred             cCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeC------------------
Confidence            53  3     2468889999888 57788899999999999999999999999999999887                  


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC---ccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE---KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~---~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                         |...++.+++.|..|++-|++..   ..+......|.+.+..+.|+|..--+++.+.|.++
T Consensus       283 -------------------p~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~  343 (350)
T KOG0641|consen  283 -------------------PGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTA  343 (350)
T ss_pred             -------------------CCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceE
Confidence                               44678999999999999998753   23344556788888889999999999999999999


Q ss_pred             EEEeC
Q psy2671         485 KLWDG  489 (573)
Q Consensus       485 ~lwd~  489 (573)
                      .+|-.
T Consensus       344 tlwa~  348 (350)
T KOG0641|consen  344 TLWAL  348 (350)
T ss_pred             EEecc
Confidence            99964

>KOG1036|consensus

Probab=99.96  E-value=1.1e-26  Score=203.52  Aligned_cols=268  Identities=18%  Similarity=0.329  Sum_probs=212.6

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      ....|.+|.|+|.++.|+.+++||++++||+.....  .....|..++..++|.+      ...+++|+-||.||.+|+.
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l--~~~~~~~~plL~c~F~d------~~~~~~G~~dg~vr~~Dln   83 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSL--KLKFKHGAPLLDCAFAD------ESTIVTGGLDGQVRRYDLN   83 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhh--hhheecCCceeeeeccC------CceEEEeccCceEEEEEec
Confidence            466799999999999999999999999999987632  22345788899999865      2468999999999999998


Q ss_pred             CCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceee
Q psy2671         328 LSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY  406 (573)
Q Consensus       328 ~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~  406 (573)
                      ++.. ..+..|...|.|+.... .+.+++||+|++|++||.+.......+.. ...|.++.                   
T Consensus        84 ~~~~-~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~-------------------  142 (323)
T KOG1036|consen   84 TGNE-DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMD-------------------  142 (323)
T ss_pred             CCcc-eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEe-------------------
Confidence            7754 45678999999999874 46899999999999999886333222221 11333332                   


Q ss_pred             CCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee-eeccccccEEEEEECCCCCEEEEeeCCCcEE
Q psy2671         407 DPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA-RMTGHQQLINCVEFSPDGRIIASASFDKSIK  485 (573)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~-~~~~h~~~v~~v~~sp~g~~las~s~dg~i~  485 (573)
                                          -.+..|+.|..|..+.+||+++...... +-..-...+.||++-|++.-.+++|-||.|.
T Consensus       143 --------------------v~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVa  202 (323)
T KOG1036|consen  143 --------------------VSGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVA  202 (323)
T ss_pred             --------------------ccCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEE
Confidence                                3477899999999999999987655432 2233345689999999999999999999998


Q ss_pred             EEeCCCC----eEEEeecCCc---------ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEE
Q psy2671         486 LWDGRIG----KFITTLRGHV---------QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW  552 (573)
Q Consensus       486 lwd~~~~----~~~~~~~~h~---------~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~  552 (573)
                      +=.....    +.-..|+.|.         -+|++++|+|--+.||||+.||.|.+||+.+.|.+..+......|-+++|
T Consensus       203 vE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsf  282 (323)
T KOG1036|consen  203 VEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSF  282 (323)
T ss_pred             EEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEe
Confidence            7655443    3345566663         36899999999999999999999999999999999999888788999999


Q ss_pred             ccCCCEEEEeeC
Q psy2671         553 APDGEKVASGGK  564 (573)
Q Consensus       553 s~d~~~l~s~~~  564 (573)
                      +.||..||.++.
T Consensus       283 s~dG~~LAia~s  294 (323)
T KOG1036|consen  283 SMDGSLLAIASS  294 (323)
T ss_pred             ccCCCeEEEEec
Confidence            999999998864

>KOG0289|consensus

Probab=99.96  E-value=5.3e-27  Score=213.97  Aligned_cols=280  Identities=21%  Similarity=0.365  Sum_probs=226.9

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ..++++...|....+++|+.|.++.++|..+++.+..++||...|+.+.|+|+...+++++.|-.|++|....... ...
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~-~~~  298 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE-PTS  298 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC-ccc
Confidence            4678888888877899999999999999999999999999999999999999999999999999999999876553 245


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC--CccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH--TRSVTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      ...|...|+.+.-+|     .+++|++++.|++.-+.|+.++..+......  .-.+++.+|+                 
T Consensus       299 ~~~h~~~V~~ls~h~-----tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH-----------------  356 (506)
T KOG0289|consen  299 SRPHEEPVTGLSLHP-----TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH-----------------  356 (506)
T ss_pred             cccccccceeeeecc-----CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc-----------------
Confidence            678999999887665     6789999999999999888877665443221  1223444444                 


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                                                                                   |+|-.+++|..|+.+++||
T Consensus       357 -------------------------------------------------------------pDgLifgtgt~d~~vkiwd  375 (506)
T KOG0289|consen  357 -------------------------------------------------------------PDGLIFGTGTPDGVVKIWD  375 (506)
T ss_pred             -------------------------------------------------------------CCceEEeccCCCceEEEEE
Confidence                                                                         4455566666666666666


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCC
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      +.+.. ....+.+|..+|..++|+.+|-+||+++.|+.|++||+|..+...++.-. ...+.++.|.+.|++|+.++.|=
T Consensus       376 lks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l  454 (506)
T KOG0289|consen  376 LKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDL  454 (506)
T ss_pred             cCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeeccee
Confidence            65543 45678889999999999999999999999999999999988777666432 34789999999999999998876


Q ss_pred             cEEEEeCC--cccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         525 TLKVWNMK--TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       525 ~v~vwd~~--~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|++++-.  ...++..+..|.+..+.+.|....++++++|.|..++++.
T Consensus       455 ~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a  504 (506)
T KOG0289|consen  455 QVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYA  504 (506)
T ss_pred             EEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEee
Confidence            66666533  4456777888998999999999999999999999998874

>KOG2106|consensus

Probab=99.96  E-value=9.1e-26  Score=209.65  Aligned_cols=364  Identities=21%  Similarity=0.345  Sum_probs=255.2

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -.+.|..++|+|.++.+....+-+.+..|+.+++....+                                        +
T Consensus       199 sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~----------------------------------------~  238 (626)
T KOG2106|consen  199 SNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKR----------------------------------------Q  238 (626)
T ss_pred             ccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEE----------------------------------------e
Confidence            355678899999876665556678999999887643211                                        1


Q ss_pred             eeEEEeeccccccCCCCC-CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671         189 AVFQVRPVTRCTSSMPGH-AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh-~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg  267 (573)
                      .+|            .++ ...|+|++|.++|+ +++|..+|.|.||+..+.+.......|.+.|.++..-.+|. |+||
T Consensus       239 ~~f------------ek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gt-llSG  304 (626)
T KOG2106|consen  239 GIF------------EKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGT-LLSG  304 (626)
T ss_pred             ecc------------ccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCcc-Eeec
Confidence            111            111 24699999999997 78999999999999987776666669999999999999996 6679


Q ss_pred             eeCCeEEEEECCCCceecccc---------------------------------------cCCcccEEEEEecccccCCC
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPM---------------------------------------RGHKQWITALSWEPFHLNHQ  308 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~---------------------------------------~~h~~~v~~~~~~~~~~~~~  308 (573)
                      +.|..|..||-.-.+.....+                                       .+|.+....++-.|     +
T Consensus       305 gKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hp-----s  379 (626)
T KOG2106|consen  305 GKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHP-----S  379 (626)
T ss_pred             CccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCC-----C
Confidence            999999999832211100011                                       12333333333332     3


Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEe
Q psy2671         309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL  388 (573)
Q Consensus       309 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~  388 (573)
                      .+.++|++.|+.+++|+  ..++.... .-..+..|+.|.+.|.++.|+..|...+.|.++..++..... ...++.+++
T Consensus       380 ~~q~~T~gqdk~v~lW~--~~k~~wt~-~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~y  455 (626)
T KOG2106|consen  380 KNQLLTCGQDKHVRLWN--DHKLEWTK-IIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRY  455 (626)
T ss_pred             hhheeeccCcceEEEcc--CCceeEEE-EecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEec-CCceEEEEE
Confidence            35677777777777777  22222211 123456677777777777777777777777766544433222 344444443


Q ss_pred             ccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-ccccEEEEE
Q psy2671         389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-HQQLINCVE  467 (573)
Q Consensus       389 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~  467 (573)
                                                           +|+|.+||.|+.|+.|++|.....+..+.+... +..+|+.+.
T Consensus       456 -------------------------------------sp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLD  498 (626)
T KOG2106|consen  456 -------------------------------------SPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLD  498 (626)
T ss_pred             -------------------------------------cCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEee
Confidence                                                 477999999999999999988766655544332 237899999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEE-----------------ee-cCCcceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFIT-----------------TL-RGHVQAVYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~-----------------~~-~~h~~~v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                      ||+|++++.+-+-|-.|..|....-+.+.                 ++ ..|...+..++-+.+.+++|+|...|+|++|
T Consensus       499 wS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf  578 (626)
T KOG2106|consen  499 WSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLF  578 (626)
T ss_pred             ecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEE
Confidence            99999999999999999999543221111                 11 2244456667778888999999999999999


Q ss_pred             eCCccc---ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         530 NMKTKK---IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       530 d~~~~~---~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ...-.+   .-..+.+|++.|.+++|.-+...|.+.+.|..|..|+
T Consensus       579 ~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~  624 (626)
T KOG2106|consen  579 SYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWR  624 (626)
T ss_pred             ccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEE
Confidence            864322   2346789999999999999999999999999999996

>KOG1446|consensus

Probab=99.96  E-value=7.1e-26  Score=199.49  Aligned_cols=287  Identities=22%  Similarity=0.323  Sum_probs=215.8

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +.+..-.+.|.++.|+++|.++++++.|.+++|+|..++.++..+.                                  
T Consensus         8 k~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~----------------------------------   53 (311)
T KOG1446|consen    8 KVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTIN----------------------------------   53 (311)
T ss_pred             cccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEee----------------------------------
Confidence            3444467789999999999999999999999999999887653321                                  


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeC--CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG--DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~--d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                           .+.-.|..++|.-....+..++.  |.+||.-++.+.+-+..+.||...|.+++.+|-+
T Consensus        54 ---------------------skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~  112 (311)
T KOG1446|consen   54 ---------------------SKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKD  112 (311)
T ss_pred             ---------------------cccccccEEEEecCCceEEEccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCC
Confidence                                 12224556666554445555554  8899999999999999999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--eEEEEec---
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--QCVRVLT---  336 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~---  336 (573)
                      ..++|++.|++|++||++..++........ .  ...+|.|     .|-.+|.+.....|++||++.-  .+..++.   
T Consensus       113 d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~--pi~AfDp-----~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~  184 (311)
T KOG1446|consen  113 DTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-R--PIAAFDP-----EGLIFALANGSELIKLYDLRSFDKGPFTTFSITD  184 (311)
T ss_pred             CeEEecccCCeEEeeEecCCCCceEEecCC-C--cceeECC-----CCcEEEEecCCCeEEEEEecccCCCCceeEccCC
Confidence            999999999999999998766543221111 1  2334444     6678888877779999999753  3334433   


Q ss_pred             CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       337 ~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      ......+.+.|+++| .++.+...+.+.+.|.-+|....++.++..                                  
T Consensus       185 ~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~----------------------------------  230 (311)
T KOG1446|consen  185 NDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPN----------------------------------  230 (311)
T ss_pred             CCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccC----------------------------------
Confidence            335677889999888 466777777788877766654444332210                                  


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                                                                 ....--...|+||++++.+|+.||+|.+|+++++..+
T Consensus       231 -------------------------------------------~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v  267 (311)
T KOG1446|consen  231 -------------------------------------------AGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKV  267 (311)
T ss_pred             -------------------------------------------CCCcceeEEECCCCcEEEEecCCCcEEEEEcCCCcEe
Confidence                                                       0000135689999999999999999999999999999


Q ss_pred             EeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         496 TTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       496 ~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ..+++ +...+.++.|+|.-.++|+++  ..+.+|=..
T Consensus       268 ~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~  303 (311)
T KOG1446|consen  268 AVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPD  303 (311)
T ss_pred             eEecCCCCCCccccccCCceeeeeecC--ceEEEEecc
Confidence            99998 688999999999888887765  568888654

>KOG0294|consensus

Probab=99.96  E-value=1.2e-26  Score=203.55  Aligned_cols=245  Identities=24%  Similarity=0.382  Sum_probs=199.0

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..++.|..+|++||+  +++++||||.|.+|+|+|+.+...+                                      
T Consensus        37 F~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~ql--------------------------------------   76 (362)
T KOG0294|consen   37 FAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQL--------------------------------------   76 (362)
T ss_pred             ccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhh--------------------------------------
Confidence            356789999999999  5899999999999999999765432                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCC--eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR--SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~--~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                       ..+..|.+.|+++.|.+.-.  +|++|+.||.|.+|+...-..+..+++|.+.|+.++.+|.|
T Consensus        77 -----------------g~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~  139 (362)
T KOG0294|consen   77 -----------------GILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSG  139 (362)
T ss_pred             -----------------cceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCC
Confidence                             23446899999999998765  89999999999999999999999999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      +.-++.+.|+.+++||+-+|+.-...--.+..  +.+.|.|     .|.+|+.++.+ .|-+|.+........+. ....
T Consensus       140 KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~a--t~v~w~~-----~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~-~~~r  210 (362)
T KOG0294|consen  140 KLALSVGGDQVLRTWNLVRGRVAFVLNLKNKA--TLVSWSP-----QGDHFVVSGRN-KIDIYQLDNASVFREIE-NPKR  210 (362)
T ss_pred             ceEEEEcCCceeeeehhhcCccceeeccCCcc--eeeEEcC-----CCCEEEEEecc-EEEEEecccHhHhhhhh-cccc
Confidence            99999999999999999888753221112222  3377765     67788877765 47888877655443332 2256


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      +.|+.|...+.+++|+.|+.|++||..++.+...+.+|...|..+.+-.                               
T Consensus       211 ~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~-------------------------------  259 (362)
T KOG0294|consen  211 ILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYT-------------------------------  259 (362)
T ss_pred             ceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEe-------------------------------
Confidence            8899999889999999999999999998888888999988777665432                               


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKE  449 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~  449 (573)
                          .|.+.+|++++.||.|++||.+..
T Consensus       260 ----~~~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  260 ----NPEHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             ----cCCceEEEEeccCceEEEEEcccc
Confidence                266789999999999999998754

>KOG4283|consensus

Probab=99.96  E-value=8.2e-27  Score=202.49  Aligned_cols=298  Identities=22%  Similarity=0.372  Sum_probs=225.8

Q ss_pred             CCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCe--------eeE-------EecCCCCcEEEEEEcC-CCCeEEE
Q psy2671         204 PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQT--------PLF-------KCEGHKHWVLCIAWSP-DSKQLVS  266 (573)
Q Consensus       204 ~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~--------~~~-------~~~~h~~~V~~v~~s~-dg~~l~s  266 (573)
                      .-|.+.|.++.+.| .|+++++|+.||.|.+||++...        ...       .-.+|+-.|.++.|-| |...+.+
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts  119 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS  119 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence            35999999999988 58999999999999999997532        111       1247888899999998 5567889


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      ++.|.+++|||.++-+....  ..-++.|++-+|+|...+.  -++|+|..|-.||+.|+..+.+.+++.+|...|.++.
T Consensus       120 sSFDhtlKVWDtnTlQ~a~~--F~me~~VYshamSp~a~sH--cLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~  195 (397)
T KOG4283|consen  120 SSFDHTLKVWDTNTLQEAVD--FKMEGKVYSHAMSPMAMSH--CLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE  195 (397)
T ss_pred             ccccceEEEeecccceeeEE--eecCceeehhhcChhhhcc--eEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE
Confidence            99999999999987654321  1234567777788764332  2678888899999999999999999999999999999


Q ss_pred             ECCCc--EEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         347 WGGSG--LIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       347 ~~~~~--~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      |++..  .+++|+.||.||+||++.. .+...+..|...                                         
T Consensus       196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k-----------------------------------------  234 (397)
T KOG4283|consen  196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTK-----------------------------------------  234 (397)
T ss_pred             eccCceeEEEecCCCceEEEEEeecccceeEEeecccCc-----------------------------------------
Confidence            99876  6899999999999998754 233333322110                                         


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec---C
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR---G  500 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~---~  500 (573)
                                               ....+..-..|.+.|+.++|+.+|.++++.+.|..+++|+...|+....-.   .
T Consensus       235 -------------------------~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~  289 (397)
T KOG4283|consen  235 -------------------------RPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPII  289 (397)
T ss_pred             -------------------------cCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccccccccccc
Confidence                                     001122345688889999999999999999999999999988775321110   1


Q ss_pred             Ccce---EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         501 HVQA---VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       501 h~~~---v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |...   -..+. +.+...++---.|+.+.++++-.++.++.+.+|...|.+..+-|+=+.+.+++.|+.|..|.
T Consensus       290 ~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~  363 (397)
T KOG4283|consen  290 HNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWS  363 (397)
T ss_pred             ccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCcccccc
Confidence            1111   01122 33444444344568899999999999999999988999999999999999999999999984

>KOG0646|consensus

Probab=99.95  E-value=1.8e-26  Score=212.73  Aligned_cols=229  Identities=26%  Similarity=0.398  Sum_probs=180.3

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~  286 (573)
                      .++|.|++-+|+|.+|+.|+-.+.+.+|.+.+|..+..+.+|=..|+|+.|+.||.+|+|||.||.|.+|.+..      
T Consensus        81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~------  154 (476)
T KOG0646|consen   81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD------  154 (476)
T ss_pred             ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe------
Confidence            46799999999999999998999999999999999999999999999999999999999999999999998631      


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC---cEEEEEeCCCeEE
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GLIYSASQDRTIK  363 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~s~d~~i~  363 (573)
                                               ++++..|+        +-.+.+.+..|+-+|+.+.....   ..++|+|.|+++|
T Consensus       155 -------------------------lv~a~~~~--------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k  201 (476)
T KOG0646|consen  155 -------------------------LVSADNDH--------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK  201 (476)
T ss_pred             -------------------------ecccccCC--------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence                                     33333333        23466778889999999987644   4799999999999


Q ss_pred             EEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671         364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL  443 (573)
Q Consensus       364 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l  443 (573)
                      +||+..|.++.++.-                                                                 
T Consensus       202 ~wdlS~g~LLlti~f-----------------------------------------------------------------  216 (476)
T KOG0646|consen  202 LWDLSLGVLLLTITF-----------------------------------------------------------------  216 (476)
T ss_pred             EEEeccceeeEEEec-----------------------------------------------------------------
Confidence            999887765433210                                                                 


Q ss_pred             EcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC----------------CCeEEEeecCCcc--eE
Q psy2671         444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR----------------IGKFITTLRGHVQ--AV  505 (573)
Q Consensus       444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~----------------~~~~~~~~~~h~~--~v  505 (573)
                                      ...+++++.+|-++.+..|+.+|.|.+.+..                .+..+..+.||..  .|
T Consensus       217 ----------------p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~I  280 (476)
T KOG0646|consen  217 ----------------PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAI  280 (476)
T ss_pred             ----------------CCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcce
Confidence                            1234555555555555555555555544321                1234567788888  99


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccC
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d  555 (573)
                      +|++.+-||.+|++|+.||.|+|||+.+..+++++....++|+-+.+.|=
T Consensus       281 TcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  281 TCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             eEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence            99999999999999999999999999999999988766788998888553

>KOG1332|consensus

Probab=99.95  E-value=8e-27  Score=197.42  Aligned_cols=263  Identities=22%  Similarity=0.407  Sum_probs=202.9

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEEE
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd  277 (573)
                      ..+|.+.|..+...--|++|||++.|++|+|+.++..   .++.++.||.++|..++|..  -|..||+++.||.|.+|.
T Consensus         7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            3479999999888888999999999999999998764   46788999999999999975  789999999999999999


Q ss_pred             CCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCCccEEEEEECCCcEE
Q psy2671         278 SSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCVRVLTSHTRSVTCIRWGGSGLI  353 (573)
Q Consensus       278 ~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~l  353 (573)
                      -+.|+-. ......|...|.+++|.|-.   .+-.|++++.||.|.+.+....   ...+....|.-.|+++.|.|..  
T Consensus        87 e~~g~w~k~~e~~~h~~SVNsV~waphe---ygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~--  161 (299)
T KOG1332|consen   87 EENGRWTKAYEHAAHSASVNSVAWAPHE---YGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS--  161 (299)
T ss_pred             cCCCchhhhhhhhhhcccceeecccccc---cceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC--
Confidence            8887422 12345789999999999854   4568999999999999987654   2234456788888888887641  


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                          .+|.+-              .|.                           +                 ...-+.|+
T Consensus       162 ----~~g~~~--------------~~~---------------------------~-----------------~~~~krlv  179 (299)
T KOG1332|consen  162 ----APGSLV--------------DQG---------------------------P-----------------AAKVKRLV  179 (299)
T ss_pred             ----CCcccc--------------ccC---------------------------c-----------------ccccceee
Confidence                010000              000                           0                 01135799


Q ss_pred             EEeCCCeEEEEcCCCCccce-eeeccccccEEEEEECCCC----CEEEEeeCCCcEEEEeCCCC--e-EEEeecCCcceE
Q psy2671         434 SGSDDFTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDG----RIIASASFDKSIKLWDGRIG--K-FITTLRGHVQAV  505 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g----~~las~s~dg~i~lwd~~~~--~-~~~~~~~h~~~v  505 (573)
                      +|+.|..|++|+..+..-.+ .++.+|.+.|+.+++.|.-    ..||++|.||++.||-.+..  . ....+......+
T Consensus       180 SgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~  259 (299)
T KOG1332|consen  180 SGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVV  259 (299)
T ss_pred             ccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcce
Confidence            99999999999987653333 3488999999999999964    47999999999999965421  1 112233445789


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +.+.||+.|.+|+.++.|+.|++|.-+
T Consensus       260 w~vSWS~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  260 WRVSWSLSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             EEEEEeccccEEEEecCCcEEEEEEeC
Confidence            999999999999999999999999643

>KOG1332|consensus

Probab=99.95  E-value=7.2e-27  Score=197.68  Aligned_cols=253  Identities=24%  Similarity=0.419  Sum_probs=191.6

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      .+|++-|-.+...--|+.|||+|.|++|||+.+....+.                                         
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s-----------------------------------------   46 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQS-----------------------------------------   46 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCc-----------------------------------------
Confidence            369999988888778999999999999999998765331                                         


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEc-C-CCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCC--
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFS-P-NGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPD--  260 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fs-p-~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~d--  260 (573)
                                 +...++.||.++|+.++|. | .|.+||+++.||.|.||.-.+++  ..+....|...|++++|.|.  
T Consensus        47 -----------~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~waphey  115 (299)
T KOG1332|consen   47 -----------KLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEY  115 (299)
T ss_pred             -----------eeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeeccccccc
Confidence                       1124577999999999995 4 69999999999999999987763  34566789999999999985  


Q ss_pred             CCeEEEEeeCCeEEEEECCCC--ceecccccCCcccEEEEEecccccC---------CCCCEEEEEeCCCcEEEEECCCC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTG--KQIGQPMRGHKQWITALSWEPFHLN---------HQCRRFASSGKDGAIRIWDVILS  329 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~---------~~~~~l~s~~~dg~v~iwd~~~~  329 (573)
                      |-.|++++.||.|.+.+.+..  -...+....|+-.|++++|.|....         ..-++|++||.|..|+||+...+
T Consensus       116 gl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~  195 (299)
T KOG1332|consen  116 GLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD  195 (299)
T ss_pred             ceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCc
Confidence            557899999999999987653  2333456789999999999986432         11267999999999999998775


Q ss_pred             e--EEEEecCCCccEEEEEECCCc-----EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCC
Q psy2671         330 Q--CVRVLTSHTRSVTCIRWGGSG-----LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG  402 (573)
Q Consensus       330 ~--~~~~~~~h~~~v~~~~~~~~~-----~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~  402 (573)
                      +  ..+++.+|...|+.++|.|..     .|+++|+||++.||.                                    
T Consensus       196 ~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt------------------------------------  239 (299)
T KOG1332|consen  196 SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWT------------------------------------  239 (299)
T ss_pred             chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEE------------------------------------
Confidence            3  234577888888888887642     355555555555553                                    


Q ss_pred             ceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc--ceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         403 GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK--SLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~--~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                                                                 .+....  ....+......+..+.||+.|++|++++.
T Consensus       240 -------------------------------------------~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~G  276 (299)
T KOG1332|consen  240 -------------------------------------------KDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGG  276 (299)
T ss_pred             -------------------------------------------ecCccCcccccccccCCcceEEEEEeccccEEEEecC
Confidence                                                       221100  01112223466899999999999999999


Q ss_pred             CCcEEEEeCC
Q psy2671         481 DKSIKLWDGR  490 (573)
Q Consensus       481 dg~i~lwd~~  490 (573)
                      |..|.+|.-.
T Consensus       277 dNkvtlwke~  286 (299)
T KOG1332|consen  277 DNKVTLWKEN  286 (299)
T ss_pred             CcEEEEEEeC
Confidence            9999999643

>KOG1036|consensus

Probab=99.95  E-value=3.4e-25  Score=194.19  Aligned_cols=280  Identities=21%  Similarity=0.282  Sum_probs=203.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      ..+.|++|.|+|.++.|+.+|.||++|++|+.......                                          
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~------------------------------------------   49 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKL------------------------------------------   49 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhh------------------------------------------
Confidence            46789999999999999999999999999987542210                                          


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                    .--|..++++++|.++ ..+++|+.||.|+.+|+.++.. ..+..|...|+||.+++....+++||
T Consensus        50 --------------~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~-~~igth~~~i~ci~~~~~~~~vIsgs  113 (323)
T KOG1036|consen   50 --------------KFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE-DQIGTHDEGIRCIEYSYEVGCVISGS  113 (323)
T ss_pred             --------------heecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc-eeeccCCCceEEEEeeccCCeEEEcc
Confidence                          1237889999999985 4689999999999999998764 34567999999999999888999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCccEEEEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSHTRSVTCIR  346 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~  346 (573)
                      +|++|++||.+........  .....|.++..       .+++|+.|..+..+.+||+++.....+.  ..-.-.+.|++
T Consensus       114 WD~~ik~wD~R~~~~~~~~--d~~kkVy~~~v-------~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~  184 (323)
T KOG1036|consen  114 WDKTIKFWDPRNKVVVGTF--DQGKKVYCMDV-------SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVA  184 (323)
T ss_pred             cCccEEEEecccccccccc--ccCceEEEEec-------cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEE
Confidence            9999999999863322211  12235666643       4678999999999999999875432211  12234567777


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .-|++ -.+.+|-||.+.+=.++......                                            ..+|.-.
T Consensus       185 ~~pn~eGy~~sSieGRVavE~~d~s~~~~--------------------------------------------skkyaFk  220 (323)
T KOG1036|consen  185 LVPNGEGYVVSSIEGRVAVEYFDDSEEAQ--------------------------------------------SKKYAFK  220 (323)
T ss_pred             EecCCCceEEEeecceEEEEccCCchHHh--------------------------------------------hhceeEE
Confidence            76654 36677778877653322110000                                            0000000


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV  505 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v  505 (573)
                      |...      ..+++-                 --.+|++++|+|--+.+|||+.||.|.+||+.+.+.+..+......|
T Consensus       221 CHr~------~~~~~~-----------------~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI  277 (323)
T KOG1036|consen  221 CHRL------SEKDTE-----------------IIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSI  277 (323)
T ss_pred             eeec------ccCCce-----------------EEEEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCCCCce
Confidence            0000      000000                 01358999999998899999999999999999999999988777789


Q ss_pred             EEEEECCCCCEEEEEeC
Q psy2671         506 YMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~  522 (573)
                      ..++|+.||..||+|+.
T Consensus       278 ~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  278 SSLSFSMDGSLLAIASS  294 (323)
T ss_pred             EEEEeccCCCeEEEEec
Confidence            99999999999999875

>KOG0650|consensus

Probab=99.95  E-value=2.9e-26  Score=217.15  Aligned_cols=316  Identities=22%  Similarity=0.391  Sum_probs=233.8

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      +|...+.||++.|.|++..|.|.+||+||.||+||||.+.||+|+..+.                               
T Consensus       391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-------------------------------  439 (733)
T KOG0650|consen  391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-------------------------------  439 (733)
T ss_pred             eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-------------------------------
Confidence            4566778999999999999999999999999999999999999875432                               


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCC--eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR--SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~--~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s  258 (573)
                                            +   .+.|.|++|+|.++  .||.+-++. +.|-+..-|..+...             
T Consensus       440 ----------------------~---d~~I~~vaw~P~~~~~vLAvA~~~~-~~ivnp~~G~~~e~~-------------  480 (733)
T KOG0650|consen  440 ----------------------F---DSEIRSVAWNPLSDLCVLAVAVGEC-VLIVNPIFGDRLEVG-------------  480 (733)
T ss_pred             ----------------------e---cceeEEEEecCCCCceeEEEEecCc-eEEeCccccchhhhc-------------
Confidence                                  1   24689999999765  455554444 666554434222110             


Q ss_pred             CCCCeEEEE----eeCCeEEEEECCCCceec---ccccCCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCC
Q psy2671         259 PDSKQLVSG----CKNGVIHAWDSSTGKQIG---QPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVIL  328 (573)
Q Consensus       259 ~dg~~l~sg----s~dg~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~  328 (573)
                      +....|+++    ..++.+..|.-....+..   ...-.|...|..+.|+.     .|++|++...   ...|.|.++..
T Consensus       481 ~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHr-----kGDYlatV~~~~~~~~VliHQLSK  555 (733)
T KOG0650|consen  481 PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHR-----KGDYLATVMPDSGNKSVLIHQLSK  555 (733)
T ss_pred             chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeec-----CCceEEEeccCCCcceEEEEeccc
Confidence            001112221    234466677644222111   12235777888898865     6789988644   34577777755


Q ss_pred             CeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         329 SQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       329 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      .....-+..-.+.|.++.|.+.. .++.+ .-+.|++||+..+.+++.+.....||..++++                  
T Consensus       556 ~~sQ~PF~kskG~vq~v~FHPs~p~lfVa-Tq~~vRiYdL~kqelvKkL~tg~kwiS~msih------------------  616 (733)
T KOG0650|consen  556 RKSQSPFRKSKGLVQRVKFHPSKPYLFVA-TQRSVRIYDLSKQELVKKLLTGSKWISSMSIH------------------  616 (733)
T ss_pred             ccccCchhhcCCceeEEEecCCCceEEEE-eccceEEEehhHHHHHHHHhcCCeeeeeeeec------------------
Confidence            44333344455678999999876 45544 45789999998888887777777777777665                  


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW  487 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw  487 (573)
                                         |.|..|+.|+.|+.+..+|+.-..++..++.-|...+++|+|++.-.++++|+.||++.|+
T Consensus       617 -------------------p~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf  677 (733)
T KOG0650|consen  617 -------------------PNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF  677 (733)
T ss_pred             -------------------CCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence                               6688999999999999999988878888899999999999999999999999999999998


Q ss_pred             eCCCC---------eEEEeecCCcce----EEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         488 DGRIG---------KFITTLRGHVQA----VYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       488 d~~~~---------~~~~~~~~h~~~----v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                      ...-.         -.+..+++|...    |..+.|+|...+|.+++.||+|++|
T Consensus       678 hg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  678 HGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             eeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence            64322         235678899765    8899999999999999999999998

>KOG0264|consensus

Probab=99.95  E-value=2.3e-26  Score=211.74  Aligned_cols=248  Identities=25%  Similarity=0.511  Sum_probs=200.0

Q ss_pred             CCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCC----------eeeEEecCCCCcEEEEEEcCCC-CeEEEEeeCCe
Q psy2671         205 GHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQ----------TPLFKCEGHKHWVLCIAWSPDS-KQLVSGCKNGV  272 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~----------~~~~~~~~h~~~V~~v~~s~dg-~~l~sgs~dg~  272 (573)
                      -|.+.|..+++-|... .+|+++..+.|.|||....          .+-.++.||.+.-.+++|++.. -+|++|+.|++
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~  201 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT  201 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence            5899999999999765 5677788899999998643          2234778999877889999843 47999999999


Q ss_pred             EEEEECCCCce------ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC--CCeEEEEecCCCccEEE
Q psy2671         273 IHAWDSSTGKQ------IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI--LSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       273 i~vwd~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~--~~~~~~~~~~h~~~v~~  344 (573)
                      |++||+.....      ....+.+|...|..++|.+.+    ...|++++.|+.+.|||++  +.++.+...+|++.|.|
T Consensus       202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h----~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~  277 (422)
T KOG0264|consen  202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLH----EDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNC  277 (422)
T ss_pred             EEEEeccccccCCccccceEEeecCCcceehhhccccc----hhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeE
Confidence            99999976433      123467999999999999865    3579999999999999998  45556667788888888


Q ss_pred             EEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       345 ~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      ++|++-+                                                                         
T Consensus       278 ~~fnp~~-------------------------------------------------------------------------  284 (422)
T KOG0264|consen  278 VAFNPFN-------------------------------------------------------------------------  284 (422)
T ss_pred             EEeCCCC-------------------------------------------------------------------------
Confidence            8876532                                                                         


Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCC------------
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRI------------  491 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~------------  491 (573)
                          +..||+|+.|++|++||+++...++..+.+|...|.+|.|||+. ..||+++.|+.+.+||+..            
T Consensus       285 ----~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d  360 (422)
T KOG0264|consen  285 ----EFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED  360 (422)
T ss_pred             ----CceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence                34567777777777777777777788899999999999999964 5789999999999999753            


Q ss_pred             --CeEEEeecCCcceEEEEEECCCCCE-EEEEeCCCcEEEEeCCc
Q psy2671         492 --GKFITTLRGHVQAVYMVAWSSDSRL-LVSGSADSTLKVWNMKT  533 (573)
Q Consensus       492 --~~~~~~~~~h~~~v~~v~~s~dg~~-las~s~D~~v~vwd~~~  533 (573)
                        .+++..-.||...|..+.|+|+..+ ++|.+.|+.+.||.+..
T Consensus       361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence              1345667899999999999998876 67889999999999853

>KOG2096|consensus

Probab=99.95  E-value=2.8e-25  Score=195.08  Aligned_cols=297  Identities=22%  Similarity=0.362  Sum_probs=203.3

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...|.||.+.|++++|+.||++|||++.|++||||++.+-..    +.+                               
T Consensus        79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~----~eH-------------------------------  123 (420)
T KOG2096|consen   79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFEN----KEH-------------------------------  123 (420)
T ss_pred             hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhh----hhh-------------------------------
Confidence            357889999999999999999999999999999999875211    000                               


Q ss_pred             EEEeceeeEEEeecccccc--CCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCe---ee---------EEecC
Q psy2671         183 IVYQKQAVFQVRPVTRCTS--SMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQT---PL---------FKCEG  247 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~--~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~---~~---------~~~~~  247 (573)
                                     +|..  .-.+|   -+.++|+||.+-++ +.-...++++|.+...+   ..         ..-+.
T Consensus       124 ---------------r~~R~nve~dh---pT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~k  185 (420)
T KOG2096|consen  124 ---------------RCIRQNVEYDH---PTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERK  185 (420)
T ss_pred             ---------------hHhhccccCCC---ceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchh
Confidence                           0000  01133   57889999987554 44456689999764321   11         11134


Q ss_pred             CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      |.-.+..+-....+.+|++++.|..|.+|++. |+.+.. .......-+..+     .+++|+.+++++-.-.|++|.+.
T Consensus       186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~-idtnq~~n~~aa-----vSP~GRFia~~gFTpDVkVwE~~  258 (420)
T KOG2096|consen  186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQS-IDTNQSSNYDAA-----VSPDGRFIAVSGFTPDVKVWEPI  258 (420)
T ss_pred             cccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeee-ecccccccccee-----eCCCCcEEEEecCCCCceEEEEE
Confidence            56667777777788999999999999999998 554422 111111112222     34689999999999999999874


Q ss_pred             CC--------eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEE
Q psy2671         328 LS--------QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       328 ~~--------~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      -+        ..+..+.+|...|...+|+++. .+++.|.||+.|+||.+-.                            
T Consensus       259 f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVr----------------------------  310 (420)
T KOG2096|consen  259 FTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVR----------------------------  310 (420)
T ss_pred             eccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccce----------------------------
Confidence            32        1344578999999999998876 6899999999999986411                            


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~  478 (573)
                             |...+.                 ...         ++...     .++.  .....++ .++.+|+|+.||.+
T Consensus       311 -------Y~~~qD-----------------pk~---------Lk~g~-----~pl~--aag~~p~-RL~lsP~g~~lA~s  349 (420)
T KOG2096|consen  311 -------YEAGQD-----------------PKI---------LKEGS-----APLH--AAGSEPV-RLELSPSGDSLAVS  349 (420)
T ss_pred             -------EecCCC-----------------chH---------hhcCC-----cchh--hcCCCce-EEEeCCCCcEEEee
Confidence                   000000                 000         00000     0000  0001223 68899999999876


Q ss_pred             eCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         479 SFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       479 s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      . ...++++..++|+....+. .|...|.+++|+++|+++|+++ |..+++..
T Consensus       350 ~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~  400 (420)
T KOG2096|consen  350 F-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR  400 (420)
T ss_pred             c-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence            4 4579999999988777664 6889999999999999999886 67888875

>KOG0294|consensus

Probab=99.95  E-value=4.5e-25  Score=193.69  Aligned_cols=236  Identities=20%  Similarity=0.339  Sum_probs=198.2

Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc---EEEEEeCCCeEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG---LIYSASQDRTIKV  364 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i~v  364 (573)
                      +..|...|++++.       +++++++||.|-+|+|||+........+..|.+.|+++.|.++.   .+++|+.||.|.+
T Consensus        39 ~~aH~~sitavAV-------s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~i  111 (362)
T KOG0294|consen   39 FSAHAGSITALAV-------SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIII  111 (362)
T ss_pred             ccccccceeEEEe-------cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEE
Confidence            4578899999985       46789999999999999999988888899999999999998765   7999999999999


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW  444 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw  444 (573)
                      |+...=.+++++++|...|+.++++                                     |.+++.++-+.|+.+++|
T Consensus       112 w~~~~W~~~~slK~H~~~Vt~lsiH-------------------------------------PS~KLALsVg~D~~lr~W  154 (362)
T KOG0294|consen  112 WRVGSWELLKSLKAHKGQVTDLSIH-------------------------------------PSGKLALSVGGDQVLRTW  154 (362)
T ss_pred             EEcCCeEEeeeecccccccceeEec-------------------------------------CCCceEEEEcCCceeeee
Confidence            9998888999999999999888876                                     567888889999999999


Q ss_pred             cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671         445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      |+-.++........+.  -+.|.|+|.|.+++.++.+ .|-+|...+.+....+... ..+.++.|- ++..|++|+.|+
T Consensus       155 NLV~Gr~a~v~~L~~~--at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~~l-~~~~L~vG~d~~  229 (362)
T KOG0294|consen  155 NLVRGRVAFVLNLKNK--ATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP-KRILCATFL-DGSELLVGGDNE  229 (362)
T ss_pred             hhhcCccceeeccCCc--ceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc-ccceeeeec-CCceEEEecCCc
Confidence            9988765443333333  2449999999999988876 4889988776655544433 346677666 566888999999


Q ss_pred             cEEEEeCCcccccccccCcCCCEEEEEE--ccCCCEEEEeeCCCcEEEcc
Q psy2671         525 TLKVWNMKTKKIEQDLPGHGDEVYAVDW--APDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       525 ~v~vwd~~~~~~~~~l~~h~~~v~~~~~--s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|++||.....++..+.+|..+|.++.+  .|++.+|+|+|.||.|++|+
T Consensus       230 ~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd  279 (362)
T KOG0294|consen  230 WISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWD  279 (362)
T ss_pred             eEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEE
Confidence            9999999998899999999999999875  35678999999999999997

>KOG0264|consensus

Probab=99.94  E-value=5.3e-26  Score=209.37  Aligned_cols=243  Identities=27%  Similarity=0.469  Sum_probs=195.1

Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe----------EEEEecCCCccEEEEEECCC--cEEEEEe
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ----------CVRVLTSHTRSVTCIRWGGS--GLIYSAS  357 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----------~~~~~~~h~~~v~~~~~~~~--~~l~s~s  357 (573)
                      .|.+.|..+.+.|.    +...+++.+..+.+.|||.....          +-..+.+|...-..+.|+..  +.+++++
T Consensus       122 ~h~gEVnRaRymPQ----np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~  197 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQ----NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGS  197 (422)
T ss_pred             cCCccchhhhhCCC----CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeecc
Confidence            46777777777763    44678888999999999975422          22367889987788999864  6899999


Q ss_pred             CCCeEEEEeCCCCee-------eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         358 QDRTIKVWRASDGVM-------CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                      .|++|++||+.....       ...+.+|...|+.+++++-                                    ...
T Consensus       198 ~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~------------------------------------h~~  241 (422)
T KOG0264|consen  198 DDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPL------------------------------------HED  241 (422)
T ss_pred             CCCcEEEEeccccccCCccccceEEeecCCcceehhhcccc------------------------------------chh
Confidence            999999999875422       3346778777777766532                                    346


Q ss_pred             EEEEEeCCCeEEEEcCCC-CccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC-eEEEeecCCcceEEE
Q psy2671         431 KLVSGSDDFTLFLWNPEK-EKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYM  507 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~-~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~~~v~~  507 (573)
                      .+++.++|+.+.|||+++ ..+......+|...|+|++|+| ++.+||+||.|++|++||+|.. +.+.++.+|...|++
T Consensus       242 lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~  321 (422)
T KOG0264|consen  242 LFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQ  321 (422)
T ss_pred             hheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEE
Confidence            789999999999999996 3444566788999999999999 5678999999999999999875 567889999999999


Q ss_pred             EEECCCC-CEEEEEeCCCcEEEEeCCccc--------------ccccccCcCCCEEEEEEccCCCE-EEEeeCCCcEEEc
Q psy2671         508 VAWSSDS-RLLVSGSADSTLKVWNMKTKK--------------IEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW  571 (573)
Q Consensus       508 v~~s~dg-~~las~s~D~~v~vwd~~~~~--------------~~~~l~~h~~~v~~~~~s~d~~~-l~s~~~d~~i~iw  571 (573)
                      |.|||+. ..||+++.|+.+.|||+..-.              ++..=.||...|..++|+|...+ ++|++.|+.+.||
T Consensus       322 V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW  401 (422)
T KOG0264|consen  322 VEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIW  401 (422)
T ss_pred             EEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEe
Confidence            9999975 578999999999999995421              12223589999999999998766 7799999999999


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      +
T Consensus       402 ~  402 (422)
T KOG0264|consen  402 Q  402 (422)
T ss_pred             e
Confidence            6

>KOG0973|consensus

Probab=99.94  E-value=9.1e-26  Score=228.90  Aligned_cols=283  Identities=26%  Similarity=0.399  Sum_probs=201.3

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCC--cceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      ....+..|.+.|+|+.|+|||++||+||.|+.|.||.....  ..++-..|                           ++
T Consensus        61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g---------------------------~~  113 (942)
T KOG0973|consen   61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTG---------------------------GA  113 (942)
T ss_pred             hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccc---------------------------cc
Confidence            33456679999999999999999999999999999998641  00100000                           00


Q ss_pred             eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                  .....-++...+.||...|..++|+|++.+||++|.|++|.|||..+.+.+..+++|...|..+.|.|
T Consensus       114 ------------~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP  181 (942)
T KOG0973|consen  114 ------------KNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP  181 (942)
T ss_pred             ------------cccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECC
Confidence                        00011234456789999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCC---ceeccccc--CCcccEEEEEecccccCCCCCEEEEEe----CCCcEEEEECCCCe
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTG---KQIGQPMR--GHKQWITALSWEPFHLNHQCRRFASSG----KDGAIRIWDVILSQ  330 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~---~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~l~s~~----~dg~v~iwd~~~~~  330 (573)
                      -|+||||-+.|++|++|++.+-   +.+.+++.  .-......+.|+|     +|.+|++.-    ...++.|.+-.+-+
T Consensus       182 ~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSP-----DG~~las~nA~n~~~~~~~IieR~tWk  256 (942)
T KOG0973|consen  182 IGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSP-----DGHHLASPNAVNGGKSTIAIIERGTWK  256 (942)
T ss_pred             ccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCC-----CcCeecchhhccCCcceeEEEecCCce
Confidence            9999999999999999996542   11222221  1123456677766     778887752    23456666655555


Q ss_pred             EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         331 CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       331 ~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      .-..+.+|..++.+++|+|.-             |.-...      .|..                              
T Consensus       257 ~~~~LvGH~~p~evvrFnP~l-------------fe~~~~------ng~~------------------------------  287 (942)
T KOG0973|consen  257 VDKDLVGHSAPVEVVRFNPKL-------------FERNNK------NGTS------------------------------  287 (942)
T ss_pred             eeeeeecCCCceEEEEeChHH-------------hccccc------cCCc------------------------------
Confidence            556677777777777776521             100000      0000                              


Q ss_pred             chhhhhhhhhheeeeCCCC--cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         411 PEESSKHALAKYQAQCPEG--EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                                    ..++.  ..+|+|+.|++|-+|.....+..+....-.+..|..++|+|||..|..+|.||+|.+..
T Consensus       288 --------------~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~  353 (942)
T KOG0973|consen  288 --------------TQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIH  353 (942)
T ss_pred             --------------cCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEE
Confidence                          00000  25789999999999998665543333223356799999999999999999999999997


Q ss_pred             CCC
Q psy2671         489 GRI  491 (573)
Q Consensus       489 ~~~  491 (573)
                      ...
T Consensus       354 Fee  356 (942)
T KOG0973|consen  354 FEE  356 (942)
T ss_pred             cch
Confidence            653

>KOG2445|consensus

Probab=99.94  E-value=6.5e-25  Score=192.05  Aligned_cols=260  Identities=22%  Similarity=0.467  Sum_probs=177.0

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee----eEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEEE
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP----LFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~----~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd  277 (573)
                      .+|.+-|.++.|.+.|+++|+|+.|++++|||.+....    ....+.|.+.|..|.|.+  -|+.+|+++.|+++.+|.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            58999999999999999999999999999999765433    344578999999999975  488999999999999997


Q ss_pred             CCCCceecccccCCc-ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc---EE
Q psy2671         278 SSTGKQIGQPMRGHK-QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG---LI  353 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~l  353 (573)
                      -..     .....|. .|+..                                   .++......|+.+.|.+..   .+
T Consensus        90 E~~-----~~~~~~~~~Wv~~-----------------------------------ttl~DsrssV~DV~FaP~hlGLkl  129 (361)
T KOG2445|consen   90 EQE-----KSEEAHGRRWVRR-----------------------------------TTLVDSRSSVTDVKFAPKHLGLKL  129 (361)
T ss_pred             ecc-----cccccccceeEEE-----------------------------------EEeecCCcceeEEEecchhcceEE
Confidence            421     1111111 11110                                   0111122344555554432   35


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      ++++.||.+|||+..+-.-+.                                                           
T Consensus       130 A~~~aDG~lRIYEA~dp~nLs-----------------------------------------------------------  150 (361)
T KOG2445|consen  130 AAASADGILRIYEAPDPMNLS-----------------------------------------------------------  150 (361)
T ss_pred             EEeccCcEEEEEecCCccccc-----------------------------------------------------------
Confidence            556666666666543211110                                                           


Q ss_pred             EEeCCCeEEEEcCCCCccc-eeeeccccccEEEEEECCC---CCEEEEeeCC-----CcEEEEeCCC----CeEEEeecC
Q psy2671         434 SGSDDFTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPD---GRIIASASFD-----KSIKLWDGRI----GKFITTLRG  500 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~---g~~las~s~d-----g~i~lwd~~~----~~~~~~~~~  500 (573)
                               -|.+...-+. ......+..+..||.|+|.   ..+||.|+.+     +.++||....    ...+.++.+
T Consensus       151 ---------~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d  221 (361)
T KOG2445|consen  151 ---------QWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD  221 (361)
T ss_pred             ---------cchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC
Confidence                     1111110000 0011123345667777763   4578888866     4788886433    234567889


Q ss_pred             CcceEEEEEECCC----CCEEEEEeCCCcEEEEeCCcc--------------------cccccccCcCCCEEEEEEccCC
Q psy2671         501 HVQAVYMVAWSSD----SRLLVSGSADSTLKVWNMKTK--------------------KIEQDLPGHGDEVYAVDWAPDG  556 (573)
Q Consensus       501 h~~~v~~v~~s~d----g~~las~s~D~~v~vwd~~~~--------------------~~~~~l~~h~~~v~~~~~s~d~  556 (573)
                      |..+|++++|.|+    ..+||+++.|| |+||++...                    +.+..+.+|+++|+.+.|.--|
T Consensus       222 ~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG  300 (361)
T KOG2445|consen  222 HTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG  300 (361)
T ss_pred             CCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee
Confidence            9999999999995    35799999999 999998731                    1234577899999999999999


Q ss_pred             CEEEEeeCCCcEEEcc
Q psy2671         557 EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       557 ~~l~s~~~d~~i~iw~  572 (573)
                      ..|+|.|.||+||+|+
T Consensus       301 tiLsStGdDG~VRLWk  316 (361)
T KOG2445|consen  301 TILSSTGDDGCVRLWK  316 (361)
T ss_pred             eEEeecCCCceeeehh
Confidence            9999999999999996

>KOG0288|consensus

Probab=99.94  E-value=8.9e-26  Score=204.87  Aligned_cols=246  Identities=24%  Similarity=0.408  Sum_probs=184.9

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ...+|.|-.+.|++++|.++++++++++.|+.+|+||+...+..                                    
T Consensus       211 ~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~------------------------------------  254 (459)
T KOG0288|consen  211 LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLR------------------------------------  254 (459)
T ss_pred             hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhh------------------------------------
Confidence            45788899999999999999999999999999999999876432                                    


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                         +++.||.+.|+++.|......+++|+.|.+|++||+....+..+.- ....+..|..+  .
T Consensus       255 -------------------~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~  312 (459)
T KOG0288|consen  255 -------------------HTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--I  312 (459)
T ss_pred             -------------------hhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec--c
Confidence                               5688999999999999887779999999999999998755443321 11112222222  2


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      ..++||                                                -.|++||+||.+...+......+. .
T Consensus       313 ~~~~Sg------------------------------------------------H~DkkvRfwD~Rs~~~~~sv~~gg-~  343 (459)
T KOG0288|consen  313 SDVISG------------------------------------------------HFDKKVRFWDIRSADKTRSVPLGG-R  343 (459)
T ss_pred             eeeeec------------------------------------------------ccccceEEEeccCCceeeEeecCc-c
Confidence            233344                                                445555555555555555555544 6


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |+++..+.++ .+++++.|.++++.|+++.....++...                                         
T Consensus       344 vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~-----------------------------------------  382 (459)
T KOG0288|consen  344 VTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAE-----------------------------------------  382 (459)
T ss_pred             eeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecc-----------------------------------------
Confidence            7788777776 5888899999999998865444332210                                         


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                              |                         ...+|  ..+.+.|||++.|+|+||.||.|+||++.++++...+..
T Consensus       383 --------g-------------------------~k~as--DwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~  427 (459)
T KOG0288|consen  383 --------G-------------------------FKCAS--DWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSL  427 (459)
T ss_pred             --------c-------------------------ccccc--ccceeEECCCCceeeeccCCCcEEEEEccCceEEEEecc
Confidence                    0                         01122  267789999999999999999999999999999888775


Q ss_pred             Ccc--eEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         501 HVQ--AVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       501 h~~--~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ...  .|++++|+|.|..|++++.++.+.+|.
T Consensus       428 s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  428 STSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             CCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            444  599999999999999999999999993

>KOG0639|consensus

Probab=99.94  E-value=1.9e-25  Score=207.24  Aligned_cols=279  Identities=20%  Similarity=0.362  Sum_probs=221.3

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEec--CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCE--GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~--~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      .|.+-|.++.+|...+++.||+ .|-|+|||+...   .++..+.  .....++++...|||+.|++|+.-.++.|||+.
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA  495 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA  495 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence            6899999999999999999986 578999998743   3333332  345678999999999999999999999999987


Q ss_pred             CCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe
Q psy2671         280 TGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS  357 (573)
Q Consensus       280 ~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s  357 (573)
                      .... +...+.......++++.+     ++.+...++-.||.|+|||+.....++.+.+|+..+.|+..+.+| .|+||+
T Consensus       496 apTprikaeltssapaCyALa~s-----pDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGG  570 (705)
T KOG0639|consen  496 APTPRIKAELTSSAPACYALAIS-----PDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGG  570 (705)
T ss_pred             CCCcchhhhcCCcchhhhhhhcC-----CccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCC
Confidence            6432 211122222233444443     466777888899999999999999999999999999999999888 599999


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      -|.++|.||++++..+...                                                             
T Consensus       571 lDntvRcWDlregrqlqqh-------------------------------------------------------------  589 (705)
T KOG0639|consen  571 LDNTVRCWDLREGRQLQQH-------------------------------------------------------------  589 (705)
T ss_pred             Cccceeehhhhhhhhhhhh-------------------------------------------------------------
Confidence            9999999998876432110                                                             


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l  517 (573)
                                          .....|.++.++|.+..+|.|-.++.+.+...... ....+.-|..-|.++.|++.|+++
T Consensus       590 --------------------dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp-~kyqlhlheScVLSlKFa~cGkwf  648 (705)
T KOG0639|consen  590 --------------------DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP-EKYQLHLHESCVLSLKFAYCGKWF  648 (705)
T ss_pred             --------------------hhhhhheecccCCCccceeeecccCcEEEEecCCc-cceeecccccEEEEEEecccCcee
Confidence                                01234777888999999999999999998876543 334566688999999999999999


Q ss_pred             EEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++.+.|+.+..|.+.-|..+...+ ..+.|++++.|.|+++++|||.|+...+|.
T Consensus       649 vStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYe  702 (705)
T KOG0639|consen  649 VSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYE  702 (705)
T ss_pred             eecCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEE
Confidence            999999999999998877665554 457899999999999999999998877764

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.94  E-value=2.1e-23  Score=201.94  Aligned_cols=293  Identities=14%  Similarity=0.159  Sum_probs=205.3

Q ss_pred             CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeecccccc
Q psy2671         122 GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTS  201 (573)
Q Consensus       122 ~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (573)
                      ++.++|++.|++|++||..+++++..                                                      
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~------------------------------------------------------   26 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRT------------------------------------------------------   26 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEE------------------------------------------------------
Confidence            35788999999999999987754321                                                      


Q ss_pred             CCCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSS  279 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~  279 (573)
                       +.+|. .+.+++|+|+|+.+ ++++.++.|++||..+++.+..+..+.. +..++|+|+++.++++ +.++.+++||+.
T Consensus        27 -~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~  103 (300)
T TIGR03866        27 -FPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIE  103 (300)
T ss_pred             -EECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECC
Confidence             11232 35679999999976 5677889999999998887766655443 5678999999987654 568999999998


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC-cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE-EE
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG-AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY-SA  356 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~-s~  356 (573)
                      +++.+... . +...+.++.|.|     +++.+++++.++ .+.+||..+++....+... ....++.|++++ .++ ++
T Consensus       104 ~~~~~~~~-~-~~~~~~~~~~~~-----dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~  175 (300)
T TIGR03866       104 TRKVLAEI-P-VGVEPEGMAVSP-----DGKIVVNTSETTNMAHFIDTKTYEIVDNVLVD-QRPRFAEFTADGKELWVSS  175 (300)
T ss_pred             CCeEEeEe-e-CCCCcceEEECC-----CCCEEEEEecCCCeEEEEeCCCCeEEEEEEcC-CCccEEEECCCCCEEEEEc
Confidence            87654322 1 122345666655     667888887765 4677898877665544322 345678888877 454 44


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      ..++.|.+||+.++.....+..+..                                               +       
T Consensus       176 ~~~~~v~i~d~~~~~~~~~~~~~~~-----------------------------------------------~-------  201 (300)
T TIGR03866       176 EIGGTVSVIDVATRKVIKKITFEIP-----------------------------------------------G-------  201 (300)
T ss_pred             CCCCEEEEEEcCcceeeeeeeeccc-----------------------------------------------c-------
Confidence            5689999999987654332211000                                               0       


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                               ...         . ......++|+|+++++++ .+.++.+.+||.++++.+..+. +...+.+++|+|+|+
T Consensus       202 ---------~~~---------~-~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~  261 (300)
T TIGR03866       202 ---------VHP---------E-AVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEK  261 (300)
T ss_pred             ---------ccc---------c-cCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCC
Confidence                     000         0 011235789999998554 3456789999999888766553 334688999999999


Q ss_pred             EEEEE-eCCCcEEEEeCCcccccccccCcCCCEEEEEEcc
Q psy2671         516 LLVSG-SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       516 ~las~-s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~  554 (573)
                      +|+++ +.++.|++||+.+++.+..++.. ...+.++++|
T Consensus       262 ~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~  300 (300)
T TIGR03866       262 YLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP  300 (300)
T ss_pred             EEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence            99886 46899999999999988887754 4558888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0650|consensus

Probab=99.94  E-value=1.6e-24  Score=205.51  Aligned_cols=317  Identities=23%  Similarity=0.364  Sum_probs=224.9

Q ss_pred             cccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe-EEEEeeCCeEEE
Q psy2671         197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ-LVSGCKNGVIHA  275 (573)
Q Consensus       197 ~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~-l~sgs~dg~i~v  275 (573)
                      ..|...+.||++.|.|+...|.|.+||+|+.||+|+||.+.++.++.++.-. +.|.||+|+|.++. ++..+....+.+
T Consensus       390 t~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~~~~~vLAvA~~~~~~i  468 (733)
T KOG0650|consen  390 TRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPLSDLCVLAVAVGECVLI  468 (733)
T ss_pred             ceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCCCCceeEEEEecCceEE
Confidence            3466677899999999999999999999999999999999999998876532 36999999997763 444444444666


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE----eCCCcEEEEECCCC----eEEEEecCCCccEEEEEE
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS----GKDGAIRIWDVILS----QCVRVLTSHTRSVTCIRW  347 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~----~~dg~v~iwd~~~~----~~~~~~~~h~~~v~~~~~  347 (573)
                      -+..-|..+...   ..                ...|+++    ..++.+..|.-...    .-++....|...|..+.|
T Consensus       469 vnp~~G~~~e~~---~t----------------~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtW  529 (733)
T KOG0650|consen  469 VNPIFGDRLEVG---PT----------------KELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTW  529 (733)
T ss_pred             eCccccchhhhc---ch----------------hhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeee
Confidence            665544322110   00                0111111    23556777765421    124455578899999999


Q ss_pred             CCCc-EEEEEeC---CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         348 GGSG-LIYSASQ---DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       348 ~~~~-~l~s~s~---d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      +..| +|++..-   ...|-|.++........++.....+..+                                     
T Consensus       530 HrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v-------------------------------------  572 (733)
T KOG0650|consen  530 HRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRV-------------------------------------  572 (733)
T ss_pred             ecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEE-------------------------------------
Confidence            9887 5655443   3456666665443222222111122222                                     


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-eEEEeecCCc
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHV  502 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~  502 (573)
                      .++|...+|+.++ ...|++||+.... ....+......|.+++++|.|..|+.|+.|+.+..+|+... +..++++-|.
T Consensus       573 ~FHPs~p~lfVaT-q~~vRiYdL~kqe-lvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~  650 (733)
T KOG0650|consen  573 KFHPSKPYLFVAT-QRSVRIYDLSKQE-LVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHE  650 (733)
T ss_pred             EecCCCceEEEEe-ccceEEEehhHHH-HHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhh
Confidence            2345556666654 4679999987632 33333344567999999999999999999999999998754 5677888999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCC------ccc---ccccccCcCCC----EEEEEEccCCCEEEEeeCCCcEE
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMK------TKK---IEQDLPGHGDE----VYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~------~~~---~~~~l~~h~~~----v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      ..+.+|+|++.-.++|+|+.|+++.|+.-.      ..-   .++.|+||...    |..+.|+|..-||+|+|.||+|+
T Consensus       651 ~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tir  730 (733)
T KOG0650|consen  651 KAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIR  730 (733)
T ss_pred             hhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEE
Confidence            999999999999999999999999988532      111   24678899765    89999999999999999999999


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      +|.
T Consensus       731 lfT  733 (733)
T KOG0650|consen  731 LFT  733 (733)
T ss_pred             eeC
Confidence            994

>KOG4283|consensus

Probab=99.93  E-value=1.2e-23  Score=182.98  Aligned_cols=309  Identities=25%  Similarity=0.414  Sum_probs=226.0

Q ss_pred             CccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         108 GHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       108 gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      -|.+.|.++.+.+ .|+++++|+.||.+.|||++.....-. .+                            -+      
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~-s~----------------------------li------   85 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEA-SG----------------------------LI------   85 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhh-cc----------------------------ce------
Confidence            3899999999987 589999999999999999976431100 00                            00      


Q ss_pred             ceeeEEEeecccc---ccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC-
Q psy2671         187 KQAVFQVRPVTRC---TSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS-  261 (573)
Q Consensus       187 ~~~~~~~~~~~~~---~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg-  261 (573)
                              ...+|   .....+|.-.|.++.|-| |.-.+.++|-|.++++||..+.+....++ -.+.|.+-++||-. 
T Consensus        86 --------~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~  156 (397)
T KOG4283|consen   86 --------AKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAM  156 (397)
T ss_pred             --------eheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhh
Confidence                    00001   123458989999999998 44577888999999999999877665554 23468888898843 


Q ss_pred             --CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCC
Q psy2671         262 --KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSH  338 (573)
Q Consensus       262 --~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h  338 (573)
                        -.+|+|.+|-.|++.|+.+|... ..+.||.+.|.++.|.|.    ..-.|++|+.||.||+||++.. .+.+.+..|
T Consensus       157 sHcLiA~gtr~~~VrLCDi~SGs~s-H~LsGHr~~vlaV~Wsp~----~e~vLatgsaDg~irlWDiRrasgcf~~lD~h  231 (397)
T KOG4283|consen  157 SHCLIAAGTRDVQVRLCDIASGSFS-HTLSGHRDGVLAVEWSPS----SEWVLATGSADGAIRLWDIRRASGCFRVLDQH  231 (397)
T ss_pred             cceEEEEecCCCcEEEEeccCCcce-eeeccccCceEEEEeccC----ceeEEEecCCCceEEEEEeecccceeEEeecc
Confidence              36788899999999999999764 578999999999999983    2346899999999999999765 556666555


Q ss_pred             CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       339 ~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      +..                           ....+++-..|...++.+++..                            
T Consensus       232 n~k---------------------------~~p~~~~n~ah~gkvngla~tS----------------------------  256 (397)
T KOG4283|consen  232 NTK---------------------------RPPILKTNTAHYGKVNGLAWTS----------------------------  256 (397)
T ss_pred             cCc---------------------------cCccccccccccceeeeeeecc----------------------------
Confidence            421                           0011223345667777777664                            


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec--ccccc----EEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT--GHQQL----INCVEFSPDGRIIASASFDKSIKLWDGRIG  492 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~--~h~~~----v~~v~~sp~g~~las~s~dg~i~lwd~~~~  492 (573)
                               ++.++++.+.|..+++|+.+++...+...-  -|++.    +. +. +.+...++---.++.+.++.+-.|
T Consensus       257 ---------d~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sg  325 (397)
T KOG4283|consen  257 ---------DARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEG  325 (397)
T ss_pred             ---------cchhhhhccCccceEEeecccCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCc
Confidence                     367889999999999999887765433221  11111    11 22 233333443345688999999999


Q ss_pred             eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      +.+..+.+|-..+.|.++-|+=+...++..|+.+..|-.
T Consensus       326 s~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p  364 (397)
T KOG4283|consen  326 SFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSP  364 (397)
T ss_pred             eEEEeeecccceeeEEeecCchhhhhccccCCccccccc
Confidence            999999999999999999999999999999999999976

>KOG0267|consensus

Probab=99.93  E-value=4.2e-26  Score=220.70  Aligned_cols=254  Identities=26%  Similarity=0.500  Sum_probs=217.2

Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      ..++....+-.+++||...       ...|...+.++..     -..++.+++||.|-.+.+|.+....++..+.+|..+
T Consensus         5 ~~~m~~~~~t~Lr~~~~~~-------~~~hsaav~~lk~-----~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hesp   72 (825)
T KOG0267|consen    5 EFLMKTKRATKLRVWDTRE-------FVAHSAAVGCLKI-----RKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESP   72 (825)
T ss_pred             cccceeeeeeccccccchh-------hhhhhhhhceeee-----eccceeeccCCCceeeccccccCCchhheeeccCCc
Confidence            3455556666778888642       2345555555542     124577899999999999999877777789999999


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |.++.|+... .|++|+.+|+|++||+.++..++++.||...+.++.|+                               
T Consensus        73 IeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~-------------------------------  121 (825)
T KOG0267|consen   73 IESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFH-------------------------------  121 (825)
T ss_pred             ceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeec-------------------------------
Confidence            9999998765 78899999999999999999999999998888777765                               


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                            |-+.+.++|+.|+.+++||.+... +.....+|...|.+++|+|+|+++++|+.|.+++|||...|+.+..|++
T Consensus       122 ------P~~~~~a~gStdtd~~iwD~Rk~G-c~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~  194 (825)
T KOG0267|consen  122 ------PYGEFFASGSTDTDLKIWDIRKKG-CSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS  194 (825)
T ss_pred             ------cceEEeccccccccceehhhhccC-ceeeecCCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc
Confidence                  557888999999999999987543 4566777999999999999999999999999999999999999999999


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      |...+..+.|+|..-++++||.|++|++||+++.+.+.........|.++.|+|+++.+++|-.+
T Consensus       195 ~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  195 HEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             ccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchh
Confidence            99999999999999999999999999999999999888888888899999999999988877554

>KOG0269|consensus

Probab=99.93  E-value=7.6e-25  Score=213.70  Aligned_cols=276  Identities=21%  Similarity=0.383  Sum_probs=213.2

Q ss_pred             EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc---cccCCc---ccEEEEEecccccCCCCCEEEEEeCCCcEEEEE
Q psy2671         252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ---PMRGHK---QWITALSWEPFHLNHQCRRFASSGKDGAIRIWD  325 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~---~~~~h~---~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd  325 (573)
                      ..+|+.+++-..|+.+++. .++++.++.......   ..++..   -....+.|..    ...++|++++..|.|.+||
T Consensus        42 ~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~----~~~NlIAT~s~nG~i~vWd  116 (839)
T KOG0269|consen   42 ANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQ----LYSNLIATCSTNGVISVWD  116 (839)
T ss_pred             cceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhccccc----chhhhheeecCCCcEEEEe
Confidence            4566777888888877764 567776654321100   001111   1233455653    2457899999999999999


Q ss_pred             CCC---CeEEEEecCCCccEEEEEECC--CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         326 VIL---SQCVRVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       326 ~~~---~~~~~~~~~h~~~v~~~~~~~--~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      +..   .+.+..+..|+..+.++.|+.  ...|++||+||+|++||++......++.+....|+.+.+++.         
T Consensus       117 lnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~---------  187 (839)
T KOG0269|consen  117 LNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPG---------  187 (839)
T ss_pred             cCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccC---------
Confidence            986   445557889999999999975  458999999999999999988888888887777877777653         


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                                                 .+..++++.+.|.+++||++...+....+..|.++|.|+.|+|++.+||+||.
T Consensus       188 ---------------------------~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGR  240 (839)
T KOG0269|consen  188 ---------------------------YGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGR  240 (839)
T ss_pred             ---------------------------CCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCC
Confidence                                       26789999999999999999998888899999999999999999999999999


Q ss_pred             CCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCE-EEEEe--CCCcEEEEeCCcc-cccccccCcCCCEEEEEEcc
Q psy2671         481 DKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRL-LVSGS--ADSTLKVWNMKTK-KIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       481 dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~-las~s--~D~~v~vwd~~~~-~~~~~l~~h~~~v~~~~~s~  554 (573)
                      |+.|+|||..+.+.  +.++. -..+|.+|+|-|+.++ ||+++  .|-.|+|||++-. -....+..|.+.++.+.|-.
T Consensus       241 DK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~  319 (839)
T KOG0269|consen  241 DKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDS  319 (839)
T ss_pred             CccEEEEeccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccC
Confidence            99999999876543  22222 2467899999998764 77665  4788999999654 34567888999999999976


Q ss_pred             -CCCEEEEeeCCCcEE
Q psy2671         555 -DGEKVASGGKDKVLR  569 (573)
Q Consensus       555 -d~~~l~s~~~d~~i~  569 (573)
                       |...|.+++.|+++.
T Consensus       320 ~d~~~l~s~sKD~tv~  335 (839)
T KOG0269|consen  320 GDRINLWSCSKDGTVL  335 (839)
T ss_pred             CCceeeEeecCccHHH
Confidence             445688999999864

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.93  E-value=2e-21  Score=197.74  Aligned_cols=367  Identities=38%  Similarity=0.689  Sum_probs=277.8

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCc-ceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-PLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .+.+|.+.|.++.|.+.+..++.++.|+.+.+|+...+. .+..                                    
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~------------------------------------  103 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKS------------------------------------  103 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEE------------------------------------
Confidence            355799999999999999999999999999999987653 1111                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCC-CcEEEEEE-cCCCC-eEEEEeC-CCeEEEEECCC-CeeeEEecCCCCcEEEEEEc
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHA-EAVISVKF-SPNGR-SLASGSG-DTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~-~~V~~~~f-sp~g~-~las~s~-d~~i~iwd~~~-~~~~~~~~~h~~~V~~v~~s  258 (573)
                                         +.++. ..+..+.+ ++++. .++..+. |+.+.+|+... ......+..|...|.+++|+
T Consensus       104 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  164 (466)
T COG2319         104 -------------------LEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFS  164 (466)
T ss_pred             -------------------EeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEEC
Confidence                               11111 34555666 78877 4555444 99999999988 77788889999999999999


Q ss_pred             CCCCeEEEEee-CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEE-Ee
Q psy2671         259 PDSKQLVSGCK-NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVR-VL  335 (573)
Q Consensus       259 ~dg~~l~sgs~-dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~-~~  335 (573)
                      |++..+++++. |+.+++|+...+..+ ..+.+|...+..+.|.|     +++ .+++++.|+.+++||...+.... .+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~  238 (466)
T COG2319         165 PDGKLLASGSSLDGTIKLWDLRTGKPL-STLAGHTDPVSSLAFSP-----DGGLLIASGSSDGTIRLWDLSTGKLLRSTL  238 (466)
T ss_pred             CCCCEEEecCCCCCceEEEEcCCCceE-EeeccCCCceEEEEEcC-----CcceEEEEecCCCcEEEEECCCCcEEeeec
Confidence            99998888886 999999999875544 45667999999999985     334 55566999999999988777777 68


Q ss_pred             cCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCee-eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         336 TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVM-CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       336 ~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                      ..|.... ...|++++ .+++++.|+.+++|+...... ...+.+|...+..+.+.                        
T Consensus       239 ~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------------------  293 (466)
T COG2319         239 SGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFS------------------------  293 (466)
T ss_pred             CCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEEC------------------------
Confidence            8888775 44788776 788899999999999886553 33335555555555443                        


Q ss_pred             hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee-ccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCC
Q psy2671         414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM-TGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRI  491 (573)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~  491 (573)
                                   |.+..+++++.|+.+++|+........... ..|...+..+.|.+++..++.+ ..|+.+.+|+...
T Consensus       294 -------------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  360 (466)
T COG2319         294 -------------PDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT  360 (466)
T ss_pred             -------------CCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCC
Confidence                         445677778888889999877654332222 4677779999994343556555 6889999999887


Q ss_pred             CeEEEeecCCcceEEEEEECCCCCEEEE-EeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         492 GKFITTLRGHVQAVYMVAWSSDSRLLVS-GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~dg~~las-~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      ........... .+..+.+++ ...++. +..++.+.+|+............+...+....+++++..+++++.+..+++
T Consensus       361 ~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (466)
T COG2319         361 GKPLKTLEGHS-NVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRL  438 (466)
T ss_pred             CceeEEecCCc-eEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEE
Confidence            76333333332 278889998 544444 688999999999888776665554378999999999999999999999999


Q ss_pred             cc
Q psy2671         571 WQ  572 (573)
Q Consensus       571 w~  572 (573)
                      |+
T Consensus       439 ~~  440 (466)
T COG2319         439 WD  440 (466)
T ss_pred             Ee
Confidence            96

>KOG1274|consensus

Probab=99.93  E-value=3e-23  Score=206.50  Aligned_cols=273  Identities=18%  Similarity=0.332  Sum_probs=219.9

Q ss_pred             cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEE
Q psy2671         246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD  325 (573)
Q Consensus       246 ~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd  325 (573)
                      ..|+..-+.|+|.|+|.+|++++.||.|++|+..........+.-+...|.+++-       .+.+|++++.+++|..|.
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~-------~s~~f~~~s~~~tv~~y~   82 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC-------YSNHFLTGSEQNTVLRYK   82 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee-------cccceEEeeccceEEEee
Confidence            3678888999999999999999999999999876543222333336667777663       345899999999999999


Q ss_pred             CCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         326 VILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       326 ~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      ...++.-..+...+-++++++++++| .++.||.|-.|++-++.+....+.+.+|..+|..+.++               
T Consensus        83 fps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~---------------  147 (933)
T KOG1274|consen   83 FPSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYD---------------  147 (933)
T ss_pred             CCCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEc---------------
Confidence            99888777777778899999999887 78899999999999999999999999999999888766               


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc--------ccccEEEEEECCCCCEEE
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--------HQQLINCVEFSPDGRIIA  476 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~--------h~~~v~~v~~sp~g~~la  476 (573)
                                            |.+++||+.+-||+|++|+++++.. ...+.+        ....+..++|+|+|..+|
T Consensus       148 ----------------------p~~~fLAvss~dG~v~iw~~~~~~~-~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la  204 (933)
T KOG1274|consen  148 ----------------------PKGNFLAVSSCDGKVQIWDLQDGIL-SKTLTGVDKDNEFILSRICTRLAWHPKGGTLA  204 (933)
T ss_pred             ----------------------CCCCEEEEEecCceEEEEEcccchh-hhhcccCCccccccccceeeeeeecCCCCeEE
Confidence                                  5688999999999999999986532 111111        134567899999988899


Q ss_pred             EeeCCCcEEEEeCCCCeEEEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc
Q psy2671         477 SASFDKSIKLWDGRIGKFITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       477 s~s~dg~i~lwd~~~~~~~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~  554 (573)
                      ..+.|+.|++|+...++....++.  +...+.+++|||.|+|||+++.||.|.|||.++-..    ......|++++|.|
T Consensus       205 ~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p  280 (933)
T KOG1274|consen  205 VPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKP  280 (933)
T ss_pred             eeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCC
Confidence            999999999999999988887764  344589999999999999999999999999987221    22346899999999


Q ss_pred             CCCEEEEeeCCCc
Q psy2671         555 DGEKVASGGKDKV  567 (573)
Q Consensus       555 d~~~l~s~~~d~~  567 (573)
                      +...|-.-..-|.
T Consensus       281 ~~n~it~~~~~g~  293 (933)
T KOG1274|consen  281 NANAITLITALGT  293 (933)
T ss_pred             CCCeeEEEeeccc
Confidence            9876544333333

>KOG2445|consensus

Probab=99.93  E-value=2.1e-23  Score=182.63  Aligned_cols=263  Identities=21%  Similarity=0.431  Sum_probs=180.3

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      .+|.|-|.++.|.+-|+.+||||.|++|+|||..+..--+                                        
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W----------------------------------------   49 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTW----------------------------------------   49 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCce----------------------------------------
Confidence            4799999999999999999999999999999975443221                                        


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCC---------eeeEEecCCCCcEEEE
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQ---------TPLFKCEGHKHWVLCI  255 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~---------~~~~~~~~h~~~V~~v  255 (573)
                                 .|......|.+.|..+.|.+  -|+.+|++|.|+++.||.=...         ....++...+..|+.|
T Consensus        50 -----------~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV  118 (361)
T KOG2445|consen   50 -----------SCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDV  118 (361)
T ss_pred             -----------EEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEE
Confidence                       12334456999999999964  4999999999999999974211         1233455667789999


Q ss_pred             EEcCC--CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--E
Q psy2671         256 AWSPD--SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--C  331 (573)
Q Consensus       256 ~~s~d--g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~  331 (573)
                      .|.|.  |-.||+++.||++|+|+......+.                                     -|.+...-  .
T Consensus       119 ~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs-------------------------------------~W~Lq~Ei~~~  161 (361)
T KOG2445|consen  119 KFAPKHLGLKLAAASADGILRIYEAPDPMNLS-------------------------------------QWTLQHEIQNV  161 (361)
T ss_pred             EecchhcceEEEEeccCcEEEEEecCCccccc-------------------------------------cchhhhhhhhc
Confidence            99883  5678888999999999865432211                                     11111000  0


Q ss_pred             EEEecCCCccEEEEEECCCc----EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         332 VRVLTSHTRSVTCIRWGGSG----LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       332 ~~~~~~h~~~v~~~~~~~~~----~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      ......+.....|+.|++..    .|+.|+.+..                                              
T Consensus       162 ~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a----------------------------------------------  195 (361)
T KOG2445|consen  162 IDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDA----------------------------------------------  195 (361)
T ss_pred             cCCcccccCcceEEeeccccccCceEEEEcccCC----------------------------------------------
Confidence            00111233445566665321    2333332200                                              


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc---cceeeeccccccEEEEEECCC----CCEEEEeeC
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK---KSLARMTGHQQLINCVEFSPD----GRIIASASF  480 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~---~~~~~~~~h~~~v~~v~~sp~----g~~las~s~  480 (573)
                                                  ..-+.++||......   .....+.+|..+|+.++|.|+    -.+||+++.
T Consensus       196 ----------------------------~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k  247 (361)
T KOG2445|consen  196 ----------------------------PHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK  247 (361)
T ss_pred             ----------------------------ccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence                                        000234444333222   123456689999999999995    358999999


Q ss_pred             CCcEEEEeCCCC--------------------eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         481 DKSIKLWDGRIG--------------------KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       481 dg~i~lwd~~~~--------------------~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      || |+||.+...                    +.+..+.+|.+.|+.+.|.-.|..|++.|.||.||+|...
T Consensus       248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence            99 999987631                    2355678999999999999999999999999999999753

>KOG2055|consensus

Probab=99.93  E-value=1.4e-23  Score=193.31  Aligned_cols=281  Identities=17%  Similarity=0.290  Sum_probs=205.7

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCce
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      .+.|+++.|+|....|++|+.|++++||.+....  .+..+.-...++.+..|.|+|. .+++++....++.||+.+++.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            3689999999999999999999999999886543  3444444456899999999999 899999999999999998764


Q ss_pred             ec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCe
Q psy2671         284 IG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT  361 (573)
Q Consensus       284 ~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~  361 (573)
                      .. .++.|++..    .+..|..+++++.++..|..|.|.+....+++.+..++- .+.|..++|+.++ .|+.++.+|.
T Consensus       293 ~k~~~~~g~e~~----~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~Ge  367 (514)
T KOG2055|consen  293 TKLKPPYGVEEK----SMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGE  367 (514)
T ss_pred             ccccCCCCcccc----hhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCce
Confidence            32 233454422    123344556778899999999998887777665544432 3456666665544 3555555556


Q ss_pred             EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671         362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL  441 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  441 (573)
                      |.+||++...++                                                                    
T Consensus       368 V~v~nl~~~~~~--------------------------------------------------------------------  379 (514)
T KOG2055|consen  368 VYVWNLRQNSCL--------------------------------------------------------------------  379 (514)
T ss_pred             EEEEecCCcceE--------------------------------------------------------------------
Confidence            666655543222                                                                    


Q ss_pred             EEEcCCCCccceeeeccc-cccEEEEEECCCCCEEEEeeCCCcEEEEeCCC------CeEEEeecCCcceEEEEEECCCC
Q psy2671         442 FLWNPEKEKKSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKLWDGRI------GKFITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~~~h-~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~------~~~~~~~~~h~~~v~~v~~s~dg  514 (573)
                                  .++... .-.-++++.|++|.++|+||..|.|.|||..+      .+++..+..-...|++++|++|+
T Consensus       380 ------------~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~  447 (514)
T KOG2055|consen  380 ------------HRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDA  447 (514)
T ss_pred             ------------EEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcch
Confidence                        221110 00135678899999999999999999999653      35566666667789999999999


Q ss_pred             CEEEEEeC--CCcEEEEeCCcccccccccCc---CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         515 RLLVSGSA--DSTLKVWNMKTKKIEQDLPGH---GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ~~las~s~--D~~v~vwd~~~~~~~~~l~~h---~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++||.+|.  +..+|+-.+.+......++.-   -+.|+|++|||.|.+||.|-.+|.+.+|+
T Consensus       448 qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k  510 (514)
T KOG2055|consen  448 QILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK  510 (514)
T ss_pred             hhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence            99988774  678999988877665555433   34689999999999999999999999996

>KOG1009|consensus

Probab=99.93  E-value=1.7e-23  Score=189.87  Aligned_cols=327  Identities=25%  Similarity=0.408  Sum_probs=212.9

Q ss_pred             cccEEEEEEcCCCC-eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         110 AEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       110 ~~~V~~l~~s~~~~-~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      ..+|.++.|.++.. .+|||+.|..||||-+....+-.                                ....+     
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~--------------------------------~~~~V-----   55 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGG--------------------------------GDMKV-----   55 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCC--------------------------------CceeE-----
Confidence            34899999998876 99999999999999987653210                                00000     


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--------C--------CeeeEEecCCCCcE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--------T--------QTPLFKCEGHKHWV  252 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--------~--------~~~~~~~~~h~~~V  252 (573)
                               .....+.+|...|+++.|+|+|..||||+.+|.|.+|-..        +        -.....+.+|...|
T Consensus        56 ---------~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~di  126 (434)
T KOG1009|consen   56 ---------EYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDI  126 (434)
T ss_pred             ---------EEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccch
Confidence                     1125678999999999999999999999999999999765        2        12335578999999


Q ss_pred             EEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       253 ~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      ..++|+||+.++++|+.|..+++||+..|... ..+.+|...+..++|.|.     ..++++-+.|...+.+.+...+.+
T Consensus       127 ydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~-~~~~dh~~yvqgvawDpl-----~qyv~s~s~dr~~~~~~~~~~~~~  200 (434)
T KOG1009|consen  127 YDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLL-AILDDHEHYVQGVAWDPL-----NQYVASKSSDRHPEGFSAKLKQVI  200 (434)
T ss_pred             hhhhccCCCceeeeeeccceEEEEEeccceeE-eeccccccccceeecchh-----hhhhhhhccCcccceeeeeeeeee
Confidence            99999999999999999999999999999765 567899999999999984     356777788877776666544332


Q ss_pred             EEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         333 RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                      .....  ..+..-+...       ......+++.-++.+         .+.+.++++++..+.+...             
T Consensus       201 ~~~~~--~~m~~~~~~~-------~e~~s~rLfhDeTlk---------sFFrRlsfTPdG~llvtPa-------------  249 (434)
T KOG1009|consen  201 KRHGL--DIMPAKAFNE-------REGKSTRLFHDETLK---------SFFRRLSFTPDGSLLVTPA-------------  249 (434)
T ss_pred             eeeee--eEeeecccCC-------CCcceeeeeecCchh---------hhhhhcccCCCCcEEEccc-------------
Confidence            22110  0000111110       111222333222211         1122333443332222110             


Q ss_pred             hhhhhhhhheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeeccccccEEEEEECC------------------CCC
Q psy2671         413 ESSKHALAKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP------------------DGR  473 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp------------------~g~  473 (573)
                                      |-+=+.+.. -++.++++-....++..++.+..+++..+.|+|                  -+-
T Consensus       250 ----------------g~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrl  313 (434)
T KOG1009|consen  250 ----------------GLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRL  313 (434)
T ss_pred             ----------------ceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccce
Confidence                            000000000 123344443333344444554445555555443                  233


Q ss_pred             EEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         474 IIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      .+|.++.| .|.+||.++-+.+.... -|-..+++++|++||..|+..|.||.+.+-.+...++
T Consensus       314 vfaiAt~~-svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el  376 (434)
T KOG1009|consen  314 VFAIATKN-SVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL  376 (434)
T ss_pred             EEEEeecc-eEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence            56666654 79999999877665543 4778999999999999999999999988887766543

>KOG0267|consensus

Probab=99.92  E-value=2e-25  Score=216.06  Aligned_cols=234  Identities=26%  Similarity=0.543  Sum_probs=201.1

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~  284 (573)
                      .|...|.++..-..++.+++|+.|..+-+|.......+..+.+|..+|.||.|+++...|+.|+.+|+|++||++.++.+
T Consensus        26 ~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~v  105 (825)
T KOG0267|consen   26 AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIV  105 (825)
T ss_pred             hhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhh
Confidence            57788888888778889999999999999998877777778999999999999999999999999999999999988765


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEE
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK  363 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~  363 (573)
                       ..+.||...+..+.|+|+     +.++++++.|+.+++||.+...|.....+|...+.+++|+|+| .+++++.|.+++
T Consensus       106 -rtLtgh~~~~~sv~f~P~-----~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvk  179 (825)
T KOG0267|consen  106 -RTLTGHLLNITSVDFHPY-----GEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVK  179 (825)
T ss_pred             -hhhhccccCcceeeeccc-----eEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceee
Confidence             478899999999999985     4678999999999999999888999999999999999988877 566666677777


Q ss_pred             EEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671         364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL  443 (573)
Q Consensus       364 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l  443 (573)
                      +||...|++..                                                                     
T Consensus       180 i~d~~agk~~~---------------------------------------------------------------------  190 (825)
T KOG0267|consen  180 IWDLTAGKLSK---------------------------------------------------------------------  190 (825)
T ss_pred             eeccccccccc---------------------------------------------------------------------
Confidence            77765554433                                                                     


Q ss_pred             EcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC
Q psy2671         444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D  523 (573)
                                 .+..|...+..+.|+|..-++++||.|+++++||+++.+.+.........|.+.+|+|+++.+++|..+
T Consensus       191 -----------ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  191 -----------EFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             -----------ccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchh
Confidence                       344556667788899999999999999999999999988888887778889999999999999988765


Q ss_pred             C
Q psy2671         524 S  524 (573)
Q Consensus       524 ~  524 (573)
                      .
T Consensus       260 s  260 (825)
T KOG0267|consen  260 S  260 (825)
T ss_pred             h
Confidence            4

>KOG4328|consensus

Probab=99.92  E-value=1.9e-23  Score=192.24  Aligned_cols=296  Identities=21%  Similarity=0.348  Sum_probs=209.2

Q ss_pred             CCCccccEEEEEEcCCCC--eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         106 MPGHAEAVISVKFSPNGR--SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~--~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..-|...|++++|+|..+  ++|+|+.-|+|-+||+.++.+-..                                    
T Consensus       182 ~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d------------------------------------  225 (498)
T KOG4328|consen  182 AKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKD------------------------------------  225 (498)
T ss_pred             eEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccC------------------------------------
Confidence            345899999999999764  899999999999999964432100                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~d  260 (573)
                                     -..-+..|..+|.++.|+|. -..+.+.|.||+|++=|+++..  .++.+.....++.++.|+.+
T Consensus       226 ---------------~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e  290 (498)
T KOG4328|consen  226 ---------------GVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAE  290 (498)
T ss_pred             ---------------ceEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCC
Confidence                           00124579999999999995 4678999999999999998753  34444445667888999998


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      ...++.+..=|...+||.+++......+.-|+..|.+++++|.+.    .+|+|+|.|++.+|||+              
T Consensus       291 ~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p----~~laT~s~D~T~kIWD~--------------  352 (498)
T KOG4328|consen  291 SRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCP----WFLATASLDQTAKIWDL--------------  352 (498)
T ss_pred             CccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCc----hheeecccCcceeeeeh--------------
Confidence            888888887779999999987765555666766777777666421    23455555555555544              


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                                                 +.-.      +.                                         
T Consensus       353 ---------------------------R~l~------~K-----------------------------------------  358 (498)
T KOG4328|consen  353 ---------------------------RQLR------GK-----------------------------------------  358 (498)
T ss_pred             ---------------------------hhhc------CC-----------------------------------------
Confidence                                       3110      00                                         


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC----CCeEEE
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR----IGKFIT  496 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~----~~~~~~  496 (573)
                                                   ..++.....|...|++..|||++-.|++.+.|..|+|||..    ......
T Consensus       359 -----------------------------~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~  409 (498)
T KOG4328|consen  359 -----------------------------ASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLG  409 (498)
T ss_pred             -----------------------------CCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccc
Confidence                                         00112234577889999999998889999999999999984    222222


Q ss_pred             eec---CCcce--EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC-CEEEE-EEccCCCEEEEe-eCCCcE
Q psy2671         497 TLR---GHVQA--VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD-EVYAV-DWAPDGEKVASG-GKDKVL  568 (573)
Q Consensus       497 ~~~---~h~~~--v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~-~v~~~-~~s~d~~~l~s~-~~d~~i  568 (573)
                      ++.   .+..+  ....+|.||..++++|-.-..|-|+|-..++.+..+..... .|.++ .|+|-+..+++| +..|.|
T Consensus       410 ~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki  489 (498)
T KOG4328|consen  410 TIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKI  489 (498)
T ss_pred             eeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceE
Confidence            322   11122  34578999999999999988999999998887666543332 55554 899988855555 456889


Q ss_pred             EEccC
Q psy2671         569 RLWQN  573 (573)
Q Consensus       569 ~iw~~  573 (573)
                      ++|.+
T Consensus       490 ~vft~  494 (498)
T KOG4328|consen  490 YVFTN  494 (498)
T ss_pred             EEEec
Confidence            99863

>KOG0639|consensus

Probab=99.92  E-value=2.1e-23  Score=193.78  Aligned_cols=280  Identities=24%  Similarity=0.464  Sum_probs=219.3

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCc---ceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .|..-|-++++|...+++.||+. |.|+|||+....   ++..                        ++           
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~Pvsq------------------------Ld-----------  460 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQ------------------------LD-----------  460 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCcccc------------------------cc-----------
Confidence            58888999999999999999875 789999986421   1100                        00           


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE--ecCCCCcEEEEEEcCCCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~s~dg~  262 (573)
                                    |    ..-.+.|.++..+|||+.|++|+.-.++.|||+...++...  +....-...+++.|||.+
T Consensus       461 --------------c----l~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDak  522 (705)
T KOG0639|consen  461 --------------C----LNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAK  522 (705)
T ss_pred             --------------c----cCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccc
Confidence                          0    01235688999999999999999999999999987665433  223334567889999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC--c
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT--R  340 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~--~  340 (573)
                      ..++++.||.|.|||+.+...+ ..+.||.+.+.++...     .+|..|-|||-|++||-||++.++.+..   |.  .
T Consensus       523 vcFsccsdGnI~vwDLhnq~~V-rqfqGhtDGascIdis-----~dGtklWTGGlDntvRcWDlregrqlqq---hdF~S  593 (705)
T KOG0639|consen  523 VCFSCCSDGNIAVWDLHNQTLV-RQFQGHTDGASCIDIS-----KDGTKLWTGGLDNTVRCWDLREGRQLQQ---HDFSS  593 (705)
T ss_pred             eeeeeccCCcEEEEEcccceee-ecccCCCCCceeEEec-----CCCceeecCCCccceeehhhhhhhhhhh---hhhhh
Confidence            9999999999999999876555 4588999999998754     4778899999999999999987754332   22  1


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      .|.++                                                                           
T Consensus       594 QIfSL---------------------------------------------------------------------------  598 (705)
T KOG0639|consen  594 QIFSL---------------------------------------------------------------------------  598 (705)
T ss_pred             hheec---------------------------------------------------------------------------
Confidence            11111                                                                           


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                         ..||.++.++.|.+.+.+.+.......  ...+..|..-|.++.|.+-|+.+++.+.|..+..|...-|..+...+.
T Consensus       599 ---g~cP~~dWlavGMens~vevlh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE  673 (705)
T KOG0639|consen  599 ---GYCPTGDWLAVGMENSNVEVLHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE  673 (705)
T ss_pred             ---ccCCCccceeeecccCcEEEEecCCcc--ceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc
Confidence               125778889999988888887655433  344566888899999999999999999999999998888877776653


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                       ...|.++..|.|.++++|||.|....||.+
T Consensus       674 -~SsVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  674 -SSSVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             -cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence             468999999999999999999999999875

>KOG1273|consensus

Probab=99.92  E-value=5.1e-23  Score=180.69  Aligned_cols=280  Identities=19%  Similarity=0.294  Sum_probs=194.6

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      ..|+.|++.|.+||+|+.||.|.|||+.|...-..+.+|..+|.|++||+||+.|+|+|.|..|.+||+..|..+.+.  
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri--  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI--  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE--
Confidence            679999999999999999999999999998877788999999999999999999999999999999999988754321  


Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCCCeEEEEeCC
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS  368 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~  368 (573)
                      -...+|....|.|-..   ...+++-=.          ..            ..-+.+++. ..++.-+.|+.+..    
T Consensus       104 rf~spv~~~q~hp~k~---n~~va~~~~----------~s------------p~vi~~s~~~h~~Lp~d~d~dln~----  154 (405)
T KOG1273|consen  104 RFDSPVWGAQWHPRKR---NKCVATIME----------ES------------PVVIDFSDPKHSVLPKDDDGDLNS----  154 (405)
T ss_pred             EccCccceeeeccccC---CeEEEEEec----------CC------------cEEEEecCCceeeccCCCcccccc----
Confidence            1234566666665221   111111100          00            001111110 01111111111100    


Q ss_pred             CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC
Q psy2671         369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~  448 (573)
                                                                        .+....+.+.|+++.+|...|.+.++|.++
T Consensus       155 --------------------------------------------------sas~~~fdr~g~yIitGtsKGkllv~~a~t  184 (405)
T KOG1273|consen  155 --------------------------------------------------SASHGVFDRRGKYIITGTSKGKLLVYDAET  184 (405)
T ss_pred             --------------------------------------------------ccccccccCCCCEEEEecCcceEEEEecch
Confidence                                                              000011236789999999999999999877


Q ss_pred             Cccceeeeccc-cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-------eE--EEeecC--CcceEEEEEECCCCCE
Q psy2671         449 EKKSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-------KF--ITTLRG--HVQAVYMVAWSSDSRL  516 (573)
Q Consensus       449 ~~~~~~~~~~h-~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-------~~--~~~~~~--h~~~v~~v~~s~dg~~  516 (573)
                      .+. ...++-. ...|..+.|+..|+.|+.-+.|+.||.|+.+.-       +.  ...++.  .+..=.+++||.||.|
T Consensus       185 ~e~-vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeY  263 (405)
T KOG1273|consen  185 LEC-VASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEY  263 (405)
T ss_pred             hee-eeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccE
Confidence            532 2222222 356889999999999999999999999987521       11  111110  0112246889999999


Q ss_pred             EEEEe-CCCcEEEEeCCcccccccccCcC-CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         517 LVSGS-ADSTLKVWNMKTKKIEQDLPGHG-DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       517 las~s-~D~~v~vwd~~~~~~~~~l~~h~-~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++.++ .-..++||....|.+++.|.|.. +....+.|+|-...+++- ..|.+++|.
T Consensus       264 v~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~  320 (405)
T KOG1273|consen  264 VCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWA  320 (405)
T ss_pred             EEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEE
Confidence            88776 34579999999999999999887 567889999988888877 678999995

>KOG2055|consensus

Probab=99.92  E-value=1.1e-22  Score=187.54  Aligned_cols=286  Identities=20%  Similarity=0.311  Sum_probs=208.3

Q ss_pred             cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEecee
Q psy2671         110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA  189 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (573)
                      .+.|++|.|||..+.+++|+.|+++||+-++...--                                 .+         
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~---------------------------------~l---------  250 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNP---------------------------------KL---------  250 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccCh---------------------------------hh---------
Confidence            468999999999999999999999999998754210                                 00         


Q ss_pred             eEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCee--eEEecCCC-CcEEEEEEcCCCCeEE
Q psy2671         190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTP--LFKCEGHK-HWVLCIAWSPDSKQLV  265 (573)
Q Consensus       190 ~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~--~~~~~~h~-~~V~~v~~s~dg~~l~  265 (573)
                                 .++.--.-+|.+++|+|+|. .+++++.......||+.+.+.  +....|+. ..+.....||++++|+
T Consensus       251 -----------qS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia  319 (514)
T KOG2055|consen  251 -----------QSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIA  319 (514)
T ss_pred             -----------eeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEE
Confidence                       00111235789999999999 899999999999999988653  33344544 4577788899999999


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEE
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI  345 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  345 (573)
                      ..+..|.|.+.-..++..+...  .-.+.|..++|.     .+++.++.++.+|.|.+||+....+++.+.... .|.. 
T Consensus       320 ~~G~~G~I~lLhakT~eli~s~--KieG~v~~~~fs-----Sdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G-~v~g-  390 (514)
T KOG2055|consen  320 IAGNNGHIHLLHAKTKELITSF--KIEGVVSDFTFS-----SDSKELLASGGTGEVYVWNLRQNSCLHRFVDDG-SVHG-  390 (514)
T ss_pred             EcccCceEEeehhhhhhhhhee--eeccEEeeEEEe-----cCCcEEEEEcCCceEEEEecCCcceEEEEeecC-ccce-
Confidence            9999999999988776554321  124567777775     467889889999999999998876665543211 0000 


Q ss_pred             EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                                                            ++++.                                     
T Consensus       391 --------------------------------------ts~~~-------------------------------------  395 (514)
T KOG2055|consen  391 --------------------------------------TSLCI-------------------------------------  395 (514)
T ss_pred             --------------------------------------eeeee-------------------------------------
Confidence                                                  01111                                     


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCC-----CccceeeeccccccEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEee
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEK-----EKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~-----~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~  498 (573)
                      ++++.++|+|+..|.|.|||..+     ..+++..+..-...|+++.|+||+++||.+|  .+..+|+-.+.+......+
T Consensus       396 S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNf  475 (514)
T KOG2055|consen  396 SLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNF  475 (514)
T ss_pred             cCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccC
Confidence            24566788888888888887543     2334455555566799999999999998876  4567888776654433333


Q ss_pred             c---CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         499 R---GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       499 ~---~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .   ...+.|+|++|||.|.+||.|..+|.|.+|.+.
T Consensus       476 P~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  476 PTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             CCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            2   234568999999999999999999999999874

>KOG0646|consensus

Probab=99.92  E-value=7.1e-23  Score=189.19  Aligned_cols=270  Identities=23%  Similarity=0.370  Sum_probs=203.4

Q ss_pred             EEeCCC-eEEEEECCCCeeeEEecCC-CCcEEEEEEcCCCCeEEEEee-CCeEEEEECCCCceecccccCCcccEEEEEe
Q psy2671         224 SGSGDT-TVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSSTGKQIGQPMRGHKQWITALSW  300 (573)
Q Consensus       224 s~s~d~-~i~iwd~~~~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~  300 (573)
                      +++.|. ++.+||+++|....++++- ...-.++..- .+.+++++.. ...+.+|.+....+..+ ..--.+.|.++.-
T Consensus        12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q-~~v~Pg~v~al~s   89 (476)
T KOG0646|consen   12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQ-YIVLPGPVHALAS   89 (476)
T ss_pred             ccCCCCcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhh-hcccccceeeeec
Confidence            444554 5999999999988887764 2111111111 2356766654 45789998765433221 1123455777764


Q ss_pred             cccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCC
Q psy2671         301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~  379 (573)
                      .|     .|.+++.|+..|.+++|.+.++..+..+..|-..|+|+.|++++ .++|||.||.|.+|.+.+          
T Consensus        90 ~n-----~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~----------  154 (476)
T KOG0646|consen   90 SN-----LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD----------  154 (476)
T ss_pred             CC-----CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe----------
Confidence            43     56667766699999999999999999999999999999999887 799999999999998532          


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH  459 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h  459 (573)
                                                                          ++++..|+         ...++..+.+|
T Consensus       155 ----------------------------------------------------lv~a~~~~---------~~~p~~~f~~H  173 (476)
T KOG0646|consen  155 ----------------------------------------------------LVSADNDH---------SVKPLHIFSDH  173 (476)
T ss_pred             ----------------------------------------------------ecccccCC---------CccceeeeccC
Confidence                                                                11222222         12345667788


Q ss_pred             cccEEEEEECCC--CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc--
Q psy2671         460 QQLINCVEFSPD--GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--  535 (573)
Q Consensus       460 ~~~v~~v~~sp~--g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~--  535 (573)
                      .-+|+.+...+.  ..+|+++|.|.++++||+..|.++.++... ..+.+++..|-++.+..|+.+|.|.+.++....  
T Consensus       174 tlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp-~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~  252 (476)
T KOG0646|consen  174 TLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP-SSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQ  252 (476)
T ss_pred             cceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC-CcceeEEEcccccEEEecCCcceEEeeehhcCCcc
Confidence            889999887765  358999999999999999999988877543 578999999999999999999999988875422  


Q ss_pred             --------------ccccccCcCC--CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         536 --------------IEQDLPGHGD--EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       536 --------------~~~~l~~h~~--~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                                    ....+.||.+  .|+|++.+-||..|++|+.||++++|+
T Consensus       253 ~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd  305 (476)
T KOG0646|consen  253 SAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD  305 (476)
T ss_pred             cccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence                          2345778988  999999999999999999999999997

>KOG1273|consensus

Probab=99.91  E-value=2.3e-22  Score=176.60  Aligned_cols=291  Identities=21%  Similarity=0.353  Sum_probs=206.5

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      -.|+.|++.|.+||.|+.||.|.|||+.|.+.                                                
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~i------------------------------------------------   57 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRI------------------------------------------------   57 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccch------------------------------------------------
Confidence            67899999999999999999999999987532                                                


Q ss_pred             EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCC
Q psy2671         193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNG  271 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg  271 (573)
                             ...+.+|..+|+|++||+||+.|+|+|.|..|.+||+..|.++++++ ..++|+.+.|.|-.+..+.+ -.+.
T Consensus        58 -------ar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~  129 (405)
T KOG1273|consen   58 -------ARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEE  129 (405)
T ss_pred             -------hhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecC
Confidence                   13467899999999999999999999999999999999999887765 45689999999865443333 3333


Q ss_pred             eEEEEECCCCceeccc--ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccEEEEEEC
Q psy2671         272 VIHAWDSSTGKQIGQP--MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSVTCIRWG  348 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~  348 (573)
                      .-.+-++..++....+  -.+....+.+..    .+...|+++.+|...|.+.++|..+.+++..+.-.+ ..|..+.++
T Consensus       130 sp~vi~~s~~~h~~Lp~d~d~dln~sas~~----~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s  205 (405)
T KOG1273|consen  130 SPVVIDFSDPKHSVLPKDDDGDLNSSASHG----VFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVS  205 (405)
T ss_pred             CcEEEEecCCceeeccCCCccccccccccc----cccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEe
Confidence            3334444333221111  111111111100    134568899999999999999999998887776555 678888888


Q ss_pred             CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       349 ~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      ..+ .++.-+.|+.||.|+.++-..    .|                                                 
T Consensus       206 ~~g~~liiNtsDRvIR~ye~~di~~----~~-------------------------------------------------  232 (405)
T KOG1273|consen  206 RKGRFLIINTSDRVIRTYEISDIDD----EG-------------------------------------------------  232 (405)
T ss_pred             ccCcEEEEecCCceEEEEehhhhcc----cC-------------------------------------------------
Confidence            776 688889999999998753100    00                                                 


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEeecCCc-ceE
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITTLRGHV-QAV  505 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~~~~h~-~~v  505 (573)
                               .|+.+     +...+ +..+.. ...-.++.||.+|.++..|+ .-..++||....|.+++.|.|.+ ...
T Consensus       233 ---------r~~e~-----e~~~K-~qDvVN-k~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l  296 (405)
T KOG1273|consen  233 ---------RDGEV-----EPEHK-LQDVVN-KLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEEL  296 (405)
T ss_pred             ---------ccCCc-----ChhHH-HHHHHh-hhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhhe
Confidence                     00000     00000 000000 11235689999999988776 34679999999999999999887 567


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ..+.|+|-...+++- ..|.|++|....
T Consensus       297 ~DV~whp~rp~i~si-~sg~v~iw~~~~  323 (405)
T KOG1273|consen  297 LDVNWHPVRPIIASI-ASGVVYIWAVVQ  323 (405)
T ss_pred             eecccccceeeeeec-cCCceEEEEeec
Confidence            889999998888877 678999997643

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.91  E-value=1.8e-21  Score=188.28  Aligned_cols=263  Identities=16%  Similarity=0.200  Sum_probs=176.2

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECCCCceecccccCCcccEEEE
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL  298 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~  298 (573)
                      +.+++++.|+.+++||+.+++.+..+.++.. +.+++|+|+++.+ ++++.++.|++||..+++.... +..+.. +..+
T Consensus         2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~-~~~~   78 (300)
T TIGR03866         2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGT-LPSGPD-PELF   78 (300)
T ss_pred             cEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEe-ccCCCC-ccEE
Confidence            4678999999999999999888877776654 6789999999977 5677889999999988765432 222222 3445


Q ss_pred             EecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc
Q psy2671         299 SWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE  377 (573)
Q Consensus       299 ~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~  377 (573)
                      .|.|     +++.+ ++++.++.+++||+.+.+.+..+..+ ..+.+++|++++                          
T Consensus        79 ~~~~-----~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg--------------------------  126 (300)
T TIGR03866        79 ALHP-----NGKILYIANEDDNLVTVIDIETRKVLAEIPVG-VEPEGMAVSPDG--------------------------  126 (300)
T ss_pred             EECC-----CCCEEEEEcCCCCeEEEEECCCCeEEeEeeCC-CCcceEEECCCC--------------------------
Confidence            5544     44544 44456788888888766555444321 123445555444                          


Q ss_pred             CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC-eEEEEcCCCCccceeee
Q psy2671         378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF-TLFLWNPEKEKKSLARM  456 (573)
Q Consensus       378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-~i~lwd~~~~~~~~~~~  456 (573)
                                                                          ..+++++.++ .+..||..+.... ...
T Consensus       127 ----------------------------------------------------~~l~~~~~~~~~~~~~d~~~~~~~-~~~  153 (300)
T TIGR03866       127 ----------------------------------------------------KIVVNTSETTNMAHFIDTKTYEIV-DNV  153 (300)
T ss_pred             ----------------------------------------------------CEEEEEecCCCeEEEEeCCCCeEE-EEE
Confidence                                                                3333333332 2333343322111 111


Q ss_pred             ccccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCeEEEeecCCc-----c--eEEEEEECCCCCEEEE-EeCCCcEE
Q psy2671         457 TGHQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRIGKFITTLRGHV-----Q--AVYMVAWSSDSRLLVS-GSADSTLK  527 (573)
Q Consensus       457 ~~h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~~~~~~~~~~h~-----~--~v~~v~~s~dg~~las-~s~D~~v~  527 (573)
                      . ......+++|+|+|+.|+. +..++.|++||..+++.+..+..+.     .  ....++|+|++++++. .+.++.+.
T Consensus       154 ~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~  232 (300)
T TIGR03866       154 L-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVA  232 (300)
T ss_pred             E-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEE
Confidence            1 1123467899999998854 4569999999999988766654221     1  2346889999998654 45567899


Q ss_pred             EEeCCcccccccccCcCCCEEEEEEccCCCEEEEe-eCCCcEEEcc
Q psy2671         528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG-GKDKVLRLWQ  572 (573)
Q Consensus       528 vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~-~~d~~i~iw~  572 (573)
                      +||+++++....+. +...+.+++|+|+|++|+++ +.++.|++|+
T Consensus       233 v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d  277 (300)
T TIGR03866       233 VVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVID  277 (300)
T ss_pred             EEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence            99999887765543 34578999999999999876 5689999997

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1274|consensus

Probab=99.91  E-value=2.5e-22  Score=200.07  Aligned_cols=241  Identities=22%  Similarity=0.390  Sum_probs=192.2

Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA  367 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~  367 (573)
                      .+|....+.++|.|     +++.+.+++.||.||+|+.... ..-..+..+...|.+++.... .+++|+.+++|.+|..
T Consensus        10 yaht~G~t~i~~d~-----~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~-~f~~~s~~~tv~~y~f   83 (933)
T KOG1274|consen   10 YAHTGGLTLICYDP-----DGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN-HFLTGSEQNTVLRYKF   83 (933)
T ss_pred             hhccCceEEEEEcC-----CCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc-ceEEeeccceEEEeeC
Confidence            46888888899876     6779999999999999997665 333444447788888886544 7999999999999998


Q ss_pred             CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671         368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE  447 (573)
Q Consensus       368 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~  447 (573)
                      ..+..-..+...+-.++.++++                                     .+|+++|.|++|-.|++-+..
T Consensus        84 ps~~~~~iL~Rftlp~r~~~v~-------------------------------------g~g~~iaagsdD~~vK~~~~~  126 (933)
T KOG1274|consen   84 PSGEEDTILARFTLPIRDLAVS-------------------------------------GSGKMIAAGSDDTAVKLLNLD  126 (933)
T ss_pred             CCCCccceeeeeeccceEEEEe-------------------------------------cCCcEEEeecCceeEEEEecc
Confidence            7765332222222333333333                                     568899999999999999876


Q ss_pred             CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-------C-cceEEEEEECCCCCEEEE
Q psy2671         448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-------H-VQAVYMVAWSSDSRLLVS  519 (573)
Q Consensus       448 ~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-------h-~~~v~~v~~s~dg~~las  519 (573)
                      +... ...+.+|..+|.+|.|+|.+++||+.+.||.|++||++++.+..++.+       . ...+..++|+|+|..+|.
T Consensus       127 D~s~-~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~  205 (933)
T KOG1274|consen  127 DSSQ-EKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV  205 (933)
T ss_pred             ccch-heeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe
Confidence            6443 456889999999999999999999999999999999998876655533       1 345678999999888888


Q ss_pred             EeCCCcEEEEeCCcccccccccC--cCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         520 GSADSTLKVWNMKTKKIEQDLPG--HGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~~~~~~l~~--h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      .+.|+.|++|+..+.+....|..  |...+..+.|||.|+|||+++.||.|-+|+.
T Consensus       206 ~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv  261 (933)
T KOG1274|consen  206 PPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNV  261 (933)
T ss_pred             eccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEec
Confidence            99999999999999887766543  4455899999999999999999999999973

>KOG0321|consensus

Probab=99.90  E-value=3e-22  Score=191.61  Aligned_cols=248  Identities=23%  Similarity=0.397  Sum_probs=176.6

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE--ecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECC
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~  279 (573)
                      ...|.+.|..+.|-|....|+++++|.++++||+++.+.+..  +.||...|.+++|.|+.. .+++|++||.|.+||++
T Consensus        96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R  175 (720)
T KOG0321|consen   96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR  175 (720)
T ss_pred             cccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence            457999999999999777899999999999999998877665  889999999999999655 67899999999999975


Q ss_pred             CCce--------------ec-----cc-------ccCCccc----EEEEEecccccCCCCCEEEEEeC-CCcEEEEECCC
Q psy2671         280 TGKQ--------------IG-----QP-------MRGHKQW----ITALSWEPFHLNHQCRRFASSGK-DGAIRIWDVIL  328 (573)
Q Consensus       280 ~~~~--------------~~-----~~-------~~~h~~~----v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~  328 (573)
                      -...              ..     ++       ...+...    |+.+.|      .+...||++|. |+.|++||++.
T Consensus       176 ~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f------kDe~tlaSaga~D~~iKVWDLRk  249 (720)
T KOG0321|consen  176 CNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF------KDESTLASAGAADSTIKVWDLRK  249 (720)
T ss_pred             ccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE------eccceeeeccCCCcceEEEeecc
Confidence            3210              00     00       0112222    333333      35668999888 99999999976


Q ss_pred             CeEE------EE--ecCC---CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCee--eEeccCCcceeeEEEeccCcee
Q psy2671         329 SQCV------RV--LTSH---TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVM--CRTLEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       329 ~~~~------~~--~~~h---~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~  394 (573)
                      ....      ..  +..|   ...+.++.....| .+++...|++|..|++..-..  ...+.++...  .         
T Consensus       250 ~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~--s---------  318 (720)
T KOG0321|consen  250 NYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNS--S---------  318 (720)
T ss_pred             cccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccc--e---------
Confidence            5322      11  2223   2356666665544 555556699999999864321  1111111100  0         


Q ss_pred             EEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-C
Q psy2671         395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-R  473 (573)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~  473 (573)
                                              .-.-...+|++.++++|+.|...++|.+.+.......+.||...|++|+|.|.. .
T Consensus       319 ------------------------f~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t  374 (720)
T KOG0321|consen  319 ------------------------FYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATT  374 (720)
T ss_pred             ------------------------eeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCC
Confidence                                    000112358899999999999999999998888888899999999999998843 3


Q ss_pred             EEEEeeCCCcEEEEeCCC
Q psy2671         474 IIASASFDKSIKLWDGRI  491 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~  491 (573)
                      -+|+++.|-++++|++..
T Consensus       375 ~v~TcSdD~~~kiW~l~~  392 (720)
T KOG0321|consen  375 PVATCSDDFRVKIWRLSN  392 (720)
T ss_pred             CceeeccCcceEEEeccC
Confidence            466779999999998754

>KOG4378|consensus

Probab=99.90  E-value=3.1e-22  Score=185.88  Aligned_cols=285  Identities=20%  Similarity=0.255  Sum_probs=208.7

Q ss_pred             eCCCeEEEEECCCCeeeEEecCC--CCcEEEEEEcCCCCeEE--EEeeCCeEEEEECCCCc---eecccccCCcc-cEEE
Q psy2671         226 SGDTTVRFWDVTTQTPLFKCEGH--KHWVLCIAWSPDSKQLV--SGCKNGVIHAWDSSTGK---QIGQPMRGHKQ-WITA  297 (573)
Q Consensus       226 s~d~~i~iwd~~~~~~~~~~~~h--~~~V~~v~~s~dg~~l~--sgs~dg~i~vwd~~~~~---~~~~~~~~h~~-~v~~  297 (573)
                      +....++|||+..-+..-.+..|  ...+.++.|+.... |+  +.+.|..+++|.-....   +......|... .|.+
T Consensus         9 S~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~   87 (673)
T KOG4378|consen    9 STGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVAC   87 (673)
T ss_pred             ccCCceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCceeEEEecccCCCCccceeeccccchHHHHhh
Confidence            33447999998765433333333  23489999987653 44  44567789999643221   11111222211 1222


Q ss_pred             EEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEec
Q psy2671         298 LSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRTL  376 (573)
Q Consensus       298 ~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~~  376 (573)
                      .        ....++++||..++|+|||++...+.+.+.+|+..|+++.++- +..|++++..|.|.+-.+.++....++
T Consensus        88 ~--------s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f  159 (673)
T KOG4378|consen   88 A--------SQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTF  159 (673)
T ss_pred             h--------hcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccce
Confidence            2        2346899999999999999998888899999999999999975 458999999999999998877655444


Q ss_pred             cCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671         377 EGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       377 ~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                      ... ...|+-+.+++.                                    ...+|.+++++|.|.+||..........
T Consensus       160 ~~~sgqsvRll~ys~s------------------------------------kr~lL~~asd~G~VtlwDv~g~sp~~~~  203 (673)
T KOG4378|consen  160 TIDSGQSVRLLRYSPS------------------------------------KRFLLSIASDKGAVTLWDVQGMSPIFHA  203 (673)
T ss_pred             ecCCCCeEEEeecccc------------------------------------cceeeEeeccCCeEEEEeccCCCcccch
Confidence            432 222223332211                                    1346789999999999999876666666


Q ss_pred             eccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         456 MTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      ...|..+...|+|+|. ..+|++-+.|..|.+||.+..+....+.. ..+...++|+++|.+|+.|+..|.|..||++..
T Consensus       204 ~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y-~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~  282 (673)
T KOG4378|consen  204 SEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY-SHPLSTVAFSECGTYLCAGNSKGELIAYDMRST  282 (673)
T ss_pred             hhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeee-cCCcceeeecCCceEEEeecCCceEEEEecccC
Confidence            7789999999999995 46788899999999999987766555542 347889999999999999999999999999875


Q ss_pred             c-ccccccCcCCCEEEEEEccCC
Q psy2671         535 K-IEQDLPGHGDEVYAVDWAPDG  556 (573)
Q Consensus       535 ~-~~~~l~~h~~~v~~~~~s~d~  556 (573)
                      + .+..+..|...|++++|-|..
T Consensus       283 k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  283 KAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             CCCceEeeecccceeEEEeeecc
Confidence            5 577888999999999998864

>KOG0321|consensus

Probab=99.90  E-value=5.8e-22  Score=189.66  Aligned_cols=286  Identities=25%  Similarity=0.407  Sum_probs=195.0

Q ss_pred             EEEEEcCC---CCeEEEEeCCCeEEEEECCCCe------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         211 ISVKFSPN---GRSLASGSGDTTVRFWDVTTQT------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       211 ~~~~fsp~---g~~las~s~d~~i~iwd~~~~~------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      +++.|++.   ...||.+-.||.|.++|.+...      .+.....|...|..+.|.|...+|++++.|.++++||++++
T Consensus        53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s  132 (720)
T KOG0321|consen   53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS  132 (720)
T ss_pred             ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence            45677753   4578999999999999976532      23455679999999999996678999999999999999988


Q ss_pred             ceecc-cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-------EEEecCCCc-------------
Q psy2671         282 KQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-------VRVLTSHTR-------------  340 (573)
Q Consensus       282 ~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-------~~~~~~h~~-------------  340 (573)
                      ...+. ...||...|.+++|.|+.    ...|++|+.||.|.|||++....       .+....|+.             
T Consensus       133 ~l~G~~~~~GH~~SvkS~cf~~~n----~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~  208 (720)
T KOG0321|consen  133 RLVGGRLNLGHTGSVKSECFMPTN----PAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIR  208 (720)
T ss_pred             eeecceeecccccccchhhhccCC----CcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccc
Confidence            76643 467999999999998853    35799999999999999864320       000111211             


Q ss_pred             -----------cEEEEEECCCcEEEEEeC-CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         341 -----------SVTCIRWGGSGLIYSASQ-DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       341 -----------~v~~~~~~~~~~l~s~s~-d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                                 .|+.+.|.++..|++++. |+.|++||++........+                               
T Consensus       209 k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~e-------------------------------  257 (720)
T KOG0321|consen  209 KWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQE-------------------------------  257 (720)
T ss_pred             ccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccC-------------------------------
Confidence                       133333444444444443 4444444444321110000                               


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc---cccEEEEEECCCCCEEEEeeCCCcEE
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH---QQLINCVEFSPDGRIIASASFDKSIK  485 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h---~~~v~~v~~sp~g~~las~s~dg~i~  485 (573)
                                                               ......+.-|   .-.+.++..+..|.+|.+.+.|++|.
T Consensus       258 -----------------------------------------p~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy  296 (720)
T KOG0321|consen  258 -----------------------------------------PRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIY  296 (720)
T ss_pred             -----------------------------------------CCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEE
Confidence                                                     0000001111   12356777777888888888899999


Q ss_pred             EEeCCCCe--EEEeecCCcce--EEEEEECCCCCEEEEEeCCCcEEEEeCCcccc-cccccCcCCCEEEEEEccCCC-EE
Q psy2671         486 LWDGRIGK--FITTLRGHVQA--VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI-EQDLPGHGDEVYAVDWAPDGE-KV  559 (573)
Q Consensus       486 lwd~~~~~--~~~~~~~h~~~--v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~-~~~l~~h~~~v~~~~~s~d~~-~l  559 (573)
                      +|++.+..  .+..+.++...  -..-..|||+.+|++|+.|...++|.+.+.+. ...+.||.-.|++++|.|..- -+
T Consensus       297 ~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v  376 (720)
T KOG0321|consen  297 FYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPV  376 (720)
T ss_pred             EEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCc
Confidence            99987643  23334444221  11235689999999999999999999987654 456789999999999988532 37


Q ss_pred             EEeeCCCcEEEcc
Q psy2671         560 ASGGKDKVLRLWQ  572 (573)
Q Consensus       560 ~s~~~d~~i~iw~  572 (573)
                      ++++.|-++++|+
T Consensus       377 ~TcSdD~~~kiW~  389 (720)
T KOG0321|consen  377 ATCSDDFRVKIWR  389 (720)
T ss_pred             eeeccCcceEEEe
Confidence            7889999999996

>KOG0269|consensus

Probab=99.89  E-value=1e-22  Score=199.03  Aligned_cols=239  Identities=19%  Similarity=0.364  Sum_probs=179.4

Q ss_pred             EEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEE
Q psy2671         115 SVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQV  193 (573)
Q Consensus       115 ~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (573)
                      .|+++. +.++|||++..|.|.+||+..-..                                                 
T Consensus        92 DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~r-------------------------------------------------  122 (839)
T KOG0269|consen   92 DVKWGQLYSNLIATCSTNGVISVWDLNKSIR-------------------------------------------------  122 (839)
T ss_pred             hcccccchhhhheeecCCCcEEEEecCcccc-------------------------------------------------
Confidence            445542 468999999999999999864100                                                 


Q ss_pred             eeccccccCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC-CCCeEEEEeeCC
Q psy2671         194 RPVTRCTSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNG  271 (573)
Q Consensus       194 ~~~~~~~~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg  271 (573)
                         .+....+..|...|.++.|++. -.+|++||.||+|++||++......++.+....|+.|+|+| .+..++++...|
T Consensus       123 ---nk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG  199 (839)
T KOG0269|consen  123 ---NKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG  199 (839)
T ss_pred             ---chhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence               0011235579999999999986 45789999999999999999888888888888999999998 567899999999


Q ss_pred             eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-CccEEEEEECCC
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-TRSVTCIRWGGS  350 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~  350 (573)
                      .+++||++..++-...+.+|.+.|.++.|+|     +..+|||||.|+.|+|||+...+......-+ ..++.+++|-|.
T Consensus       200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhP-----nr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~  274 (839)
T KOG0269|consen  200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHP-----NREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPA  274 (839)
T ss_pred             eEEEeeccCchhHHHHhhcccCceEEEeecC-----CCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccC
Confidence            9999999987766667889999999999998     4578999999999999999766544333322 245667777654


Q ss_pred             c--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         351 G--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       351 ~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      .  .|++++.                                                                      
T Consensus       275 ~~~hLAtcsm----------------------------------------------------------------------  284 (839)
T KOG0269|consen  275 RSYHLATCSM----------------------------------------------------------------------  284 (839)
T ss_pred             ccchhhhhhc----------------------------------------------------------------------
Confidence            3  2333221                                                                      


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLW  487 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lw  487 (573)
                             ..|-.|++||++..-.+...+..|...++.++|.. |-..+.+++.||+|..-
T Consensus       285 -------v~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh  337 (839)
T KOG0269|consen  285 -------VVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQH  337 (839)
T ss_pred             -------cccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHh
Confidence                   13445666666665556667777888888888865 45567788888876543

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.89  E-value=2e-19  Score=183.06  Aligned_cols=325  Identities=37%  Similarity=0.683  Sum_probs=250.9

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-eeEEecCCC-CcEEEEEE-cCCCC-eEEEEee-CCeEEEEE
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-PLFKCEGHK-HWVLCIAW-SPDSK-QLVSGCK-NGVIHAWD  277 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-~~~~~~~h~-~~V~~v~~-s~dg~-~l~sgs~-dg~i~vwd  277 (573)
                      ..+|...+.++.|.+.+..++.++.|+.+.+|+...+. .+..+.++. ..+..+.+ ++++. .++..+. |+.+.+|+
T Consensus        61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  140 (466)
T COG2319          61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWD  140 (466)
T ss_pred             eeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEE
Confidence            45789999999999999999999999999999998876 566666644 36777777 88887 5555444 99999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIY  354 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~  354 (573)
                      ..........+..|...|..+.|.|     +++.++.++. |+.+++|+......+..+.+|...+.+++|.+++  .++
T Consensus       141 ~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~  215 (466)
T COG2319         141 LSTPGKLIRTLEGHSESVTSLAFSP-----DGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIA  215 (466)
T ss_pred             ecCCCeEEEEEecCcccEEEEEECC-----CCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEE
Confidence            9872223345678999999998877     3457777775 9999999999888888899999999999999777  344


Q ss_pred             EEeCCCeEEEEeCCCCeeeE-eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCR-TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      +++.|+.+++|+...+.... .+.+|.... ...                                     ..+.+..++
T Consensus       216 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~-------------------------------------~~~~~~~~~  257 (466)
T COG2319         216 SGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSS-------------------------------------FSPDGSLLA  257 (466)
T ss_pred             EecCCCcEEEEECCCCcEEeeecCCCCcce-eEe-------------------------------------ECCCCCEEE
Confidence            45999999999888776666 566665432 112                                     235567888


Q ss_pred             EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEEC
Q psy2671         434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWS  511 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s  511 (573)
                      +++.|+.+++|+............+|...+.++.|+|++..+++++.|+.+++||..+........  .|...+..+.|+
T Consensus       258 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (466)
T COG2319         258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFS  337 (466)
T ss_pred             EecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEEC
Confidence            999999999999886655333336788999999999998898889999999999998887666665  787788999994


Q ss_pred             CCCCEEEEE-eCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE-eeCCCcEEEcc
Q psy2671         512 SDSRLLVSG-SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS-GGKDKVLRLWQ  572 (573)
Q Consensus       512 ~dg~~las~-s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s-~~~d~~i~iw~  572 (573)
                      +++..++.+ ..|+.+++|++...........+ ..+..+.+++ ...... ++.++.+.+|+
T Consensus       338 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  398 (466)
T COG2319         338 PDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSP-DGRVVSSGSTDGTVRLWD  398 (466)
T ss_pred             CCCCEEEEeecCCCcEEeeecCCCceeEEecCC-ceEEEEEECC-CCCEEEEecCCCceEEEe
Confidence            343556555 68899999999887633333322 2288999999 544444 68889999996

>KOG0270|consensus

Probab=99.88  E-value=2.2e-21  Score=178.30  Aligned_cols=165  Identities=28%  Similarity=0.497  Sum_probs=137.7

Q ss_pred             cCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC-CCeEEEEeeCCeEEEEEC
Q psy2671         201 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-SKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d-g~~l~sgs~dg~i~vwd~  278 (573)
                      ....||++.|.+++|+.. ...|||||.|.+|++||+.++++...+..|...|.+++|+|. ...|++|+.|++|.+.|.
T Consensus       237 ~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~  316 (463)
T KOG0270|consen  237 NSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDC  316 (463)
T ss_pred             cccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeec
Confidence            346789999999999976 457899999999999999999999999999999999999984 568999999999999998


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECC--CcEEEE
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGG--SGLIYS  355 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~--~~~l~s  355 (573)
                      +......... .-.+.|..+.|.|+.    ...++++..||+++-+|++.. +++.++..|..+|.++.++.  .+++.+
T Consensus       317 R~~~~s~~~w-k~~g~VEkv~w~~~s----e~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t  391 (463)
T KOG0270|consen  317 RDPSNSGKEW-KFDGEVEKVAWDPHS----ENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST  391 (463)
T ss_pred             cCccccCceE-EeccceEEEEecCCC----ceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee
Confidence            7422211111 123468889998853    346888899999999999875 89999999999999999975  468999


Q ss_pred             EeCCCeEEEEeCCCC
Q psy2671         356 ASQDRTIKVWRASDG  370 (573)
Q Consensus       356 ~s~d~~i~vw~~~~~  370 (573)
                      ++.|+.+++|++...
T Consensus       392 ~s~d~~Vklw~~~~~  406 (463)
T KOG0270|consen  392 ASTDKVVKLWKFDVD  406 (463)
T ss_pred             ccccceEEEEeecCC
Confidence            999999999997643

>KOG0302|consensus

Probab=99.88  E-value=9.1e-21  Score=170.61  Aligned_cols=244  Identities=31%  Similarity=0.524  Sum_probs=180.7

Q ss_pred             CCCCCCCcEEEEEEcCCC--CeEEEEeCCCeEEEEECCC----------------CeeeEEecCCCCcEEEEEEcCC-CC
Q psy2671         202 SMPGHAEAVISVKFSPNG--RSLASGSGDTTVRFWDVTT----------------QTPLFKCEGHKHWVLCIAWSPD-SK  262 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g--~~las~s~d~~i~iwd~~~----------------~~~~~~~~~h~~~V~~v~~s~d-g~  262 (573)
                      ...+|.+.+.-+.-++-+  .+.|+=+..|.|.||++..                .++++++.+|...=+.++|||- ..
T Consensus       146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g  225 (440)
T KOG0302|consen  146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG  225 (440)
T ss_pred             cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence            456788888888888755  4556667889999999742                3578899999999999999992 22


Q ss_pred             eEEEEeeCCeEEEEECCCCcee--cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---EEEEecC
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQI--GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---CVRVLTS  337 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~  337 (573)
                      .|+||.--+.|++|...+|.-.  ..++.+|+..|..+.|+|..    ...|++||-||+|||||++.+.   ++. .+.
T Consensus       226 ~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE----~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kA  300 (440)
T KOG0302|consen  226 RLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTE----DGVFASCSCDGSIRIWDIRSGPKKAAVS-TKA  300 (440)
T ss_pred             ccccCccccceEeeeeccCceeecCccccccccchhhhccCCcc----CceEEeeecCceEEEEEecCCCccceeE-eec
Confidence            5888888899999999887532  34678899999999999853    4589999999999999999873   333 367


Q ss_pred             CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      |...|+.+.|+..- +|++|+.||+++|||++.-                                              
T Consensus       301 h~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~----------------------------------------------  334 (440)
T KOG0302|consen  301 HNSDVNVISWNRREPLLASGGDDGTLSIWDLRQF----------------------------------------------  334 (440)
T ss_pred             cCCceeeEEccCCcceeeecCCCceEEEEEhhhc----------------------------------------------
Confidence            88888888887543 4666666666666665431                                              


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCe--
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGK--  493 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~--  493 (573)
                                                     +...++..+.-|..+|++|.|+|. ...|+++|.|..|.+||+..-.  
T Consensus       335 -------------------------------~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~  383 (440)
T KOG0302|consen  335 -------------------------------KSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADE  383 (440)
T ss_pred             -------------------------------cCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCCh
Confidence                                           112345667789999999999994 5678889999999999975321  


Q ss_pred             -----------------EEEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEE
Q psy2671         494 -----------------FITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVW  529 (573)
Q Consensus       494 -----------------~~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vw  529 (573)
                                       ++..-.| ...+-.+.|+++- .+|++.+.||. .||
T Consensus       384 ee~~~~a~~~L~dlPpQLLFVHqG-Qke~KevhWH~QiPG~lvsTa~dGf-nVf  435 (440)
T KOG0302|consen  384 EEIDQEAAEGLQDLPPQLLFVHQG-QKEVKEVHWHRQIPGLLVSTAIDGF-NVF  435 (440)
T ss_pred             hhhccccccchhcCCceeEEEecc-hhHhhhheeccCCCCeEEEecccce-eEE
Confidence                             1222222 2356678899864 37888888874 444

>KOG0302|consensus

Probab=99.88  E-value=6e-21  Score=171.76  Aligned_cols=240  Identities=21%  Similarity=0.365  Sum_probs=183.4

Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC----------------CeEEEEecCCCccEEEEEECC--C
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----------------SQCVRVLTSHTRSVTCIRWGG--S  350 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----------------~~~~~~~~~h~~~v~~~~~~~--~  350 (573)
                      .+|.+.+..+.-.++.   +..+.++-+..|.|+||++..                .+++.++.+|...=..++|++  .
T Consensus       148 i~h~g~~NRvr~~~~~---~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~  224 (440)
T KOG0302|consen  148 IPHYGGINRVRVSRLG---NEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT  224 (440)
T ss_pred             cccccccceeeecccC---CcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence            3566666655554432   334567778999999999742                245677888998889999997  4


Q ss_pred             cEEEEEeCCCeEEEEeCCCCeee---EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         351 GLIYSASQDRTIKVWRASDGVMC---RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       351 ~~l~s~s~d~~i~vw~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      |.+++|.--+.|++|...+|.-.   ..+.+|...|..+++++.                                    
T Consensus       225 g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSpt------------------------------------  268 (440)
T KOG0302|consen  225 GRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPT------------------------------------  268 (440)
T ss_pred             cccccCccccceEeeeeccCceeecCccccccccchhhhccCCc------------------------------------
Confidence            56888888899999998887532   345667777777766643                                    


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCC-ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC---CeEEEeecCCcc
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKE-KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI---GKFITTLRGHVQ  503 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~-~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~---~~~~~~~~~h~~  503 (573)
                      ....+++|+-||+|+|||++.+ ++.......|...|+.|.|+.+..+||+|+.||+++|||++.   ++.+.+++-|..
T Consensus       269 E~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~  348 (440)
T KOG0302|consen  269 EDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKA  348 (440)
T ss_pred             cCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccC
Confidence            3568999999999999999876 334444588999999999999888999999999999999875   567788999999


Q ss_pred             eEEEEEECCC-CCEEEEEeCCCcEEEEeCCcccc-----------cc-----cccCcC--CCEEEEEEccC-CCEEEEee
Q psy2671         504 AVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKKI-----------EQ-----DLPGHG--DEVYAVDWAPD-GEKVASGG  563 (573)
Q Consensus       504 ~v~~v~~s~d-g~~las~s~D~~v~vwd~~~~~~-----------~~-----~l~~h~--~~v~~~~~s~d-~~~l~s~~  563 (573)
                      +|+++.|+|. ...|+++|.|..|.+||+.-.+-           ++     -|.-|.  ..|..+.|++. ..+|++.+
T Consensus       349 pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa  428 (440)
T KOG0302|consen  349 PITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTA  428 (440)
T ss_pred             CeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEec
Confidence            9999999985 45788888999999999853211           11     122343  36778899986 34788888


Q ss_pred             CCCc
Q psy2671         564 KDKV  567 (573)
Q Consensus       564 ~d~~  567 (573)
                      .||.
T Consensus       429 ~dGf  432 (440)
T KOG0302|consen  429 IDGF  432 (440)
T ss_pred             ccce
Confidence            8883

>KOG0270|consensus

Probab=99.87  E-value=2e-20  Score=172.03  Aligned_cols=245  Identities=21%  Similarity=0.364  Sum_probs=179.5

Q ss_pred             EEEEEcC-------CCCeEEEEeeCCeEEEEECCCCcee----------c----------ccccCCcccEEEEEeccccc
Q psy2671         253 LCIAWSP-------DSKQLVSGCKNGVIHAWDSSTGKQI----------G----------QPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       253 ~~v~~s~-------dg~~l~sgs~dg~i~vwd~~~~~~~----------~----------~~~~~h~~~v~~~~~~~~~~  305 (573)
                      .|++|-.       .|+++|.|+.|..|.|||+.--..+          .          ....+|++.|.++.|+... 
T Consensus       177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~-  255 (463)
T KOG0270|consen  177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF-  255 (463)
T ss_pred             hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc-
Confidence            5777742       3679999999999999997521110          0          0123688888888876532 


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCee-eEeccCCcce
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVM-CRTLEGHAHW  382 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~-~~~~~~~~~~  382 (573)
                         ...|++||.|.+|++||+.++++..++..|.+.|.++.|.+..  .+++|+.|+++++.|.+.-.. -..++ -...
T Consensus       256 ---~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk-~~g~  331 (463)
T KOG0270|consen  256 ---RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWK-FDGE  331 (463)
T ss_pred             ---ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEE-eccc
Confidence               3579999999999999999999999999999999999998754  799999999999999874111 01110 0112


Q ss_pred             eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccccc
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL  462 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~  462 (573)
                      |..+++.+.                                    ....++++..||+++-+|.+...+++..+..|.+.
T Consensus       332 VEkv~w~~~------------------------------------se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~  375 (463)
T KOG0270|consen  332 VEKVAWDPH------------------------------------SENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDE  375 (463)
T ss_pred             eEEEEecCC------------------------------------CceeEEEecCCceEEeeecCCCCCceeEEEeccCC
Confidence            333333221                                    13467888999999999999998999999999999


Q ss_pred             EEEEEECCCC-CEEEEeeCCCcEEEEeCCCCe--EEEeecCCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccccc
Q psy2671         463 INCVEFSPDG-RIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       463 v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~--~~~~~~~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~~~  538 (573)
                      |.++.+++.- .++++++.|+.|++|+...-.  .+..-....+...|+++.|+-. ++|.|+..+.++|||+.+...++
T Consensus       376 ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  376 ISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             cceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence            9999999854 478899999999999875432  2221111123466778888765 46677777789999998776543

>KOG0322|consensus

Probab=99.87  E-value=2.6e-21  Score=166.00  Aligned_cols=286  Identities=22%  Similarity=0.334  Sum_probs=194.7

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      +.+|.+.|+++.|-.+++ |.+|...|.|++|++.+...+..++ .|...|+.+.--|+ ..|.+-++|+.+.+|++..+
T Consensus        10 LRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s   87 (323)
T KOG0322|consen   10 LRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYS   87 (323)
T ss_pred             eccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCc
Confidence            458999999999988886 8999999999999999988887777 56778888888887 46889999999999998765


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCC----EEEEEeCCCc-EEEEECCCCeEEEEe----cCCCccEEEEEECCC--
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCR----RFASSGKDGA-IRIWDVILSQCVRVL----TSHTRSVTCIRWGGS--  350 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~----~l~s~~~dg~-v~iwd~~~~~~~~~~----~~h~~~v~~~~~~~~--  350 (573)
                      ..+    ..|.-.+.++.|.++.+....+    .++.-++... +.+-|......+...    .+..+.+.|..+.-.  
T Consensus        88 ~~i----~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~  163 (323)
T KOG0322|consen   88 AFI----SIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG  163 (323)
T ss_pred             ceE----EEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence            433    3455556667777665433221    1111111000 111222111111111    123456777775321  


Q ss_pred             -c-EEEEEeCCCeEEEEeCCCCeeeE----------eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         351 -G-LIYSASQDRTIKVWRASDGVMCR----------TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       351 -~-~l~s~s~d~~i~vw~~~~~~~~~----------~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                       . .++.|..+|.+-+||++++..+.          ....|...|.++.+.+.                           
T Consensus       164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~---------------------------  216 (323)
T KOG0322|consen  164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASS---------------------------  216 (323)
T ss_pred             ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechh---------------------------
Confidence             2 57778899999999999873322          22333334433332211                           


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee---eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~---~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                                ...=++|+.+..+..|++......+.   ...-.+-.|..+.+-||++.+|+++.|+.||+|.-++.+.+
T Consensus       217 ----------~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pL  286 (323)
T KOG0322|consen  217 ----------CDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPL  286 (323)
T ss_pred             ----------hcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCch
Confidence                      11113455555666776654321111   11111224788999999999999999999999999999999


Q ss_pred             EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       496 ~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      ..++-|...|++++|+||...+|++|.|++|.+|++
T Consensus       287 AVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  287 AVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             hhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            999999999999999999999999999999999986

>KOG1009|consensus

Probab=99.87  E-value=4.1e-20  Score=168.11  Aligned_cols=297  Identities=22%  Similarity=0.372  Sum_probs=206.6

Q ss_pred             CCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCe---------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671         207 AEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQT---------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       207 ~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~---------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vw  276 (573)
                      ..+|.++.|.+++. .+|||+.|..|+||.+....         -+..+..|...|+++.|+|+|..||||+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            36899999999876 99999999999999875432         123467899999999999999999999999999999


Q ss_pred             ECC--------C-----C--ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         277 DSS--------T-----G--KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       277 d~~--------~-----~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      ...        +     .  -...+.+.+|...|+.++|.|     ++..+++++-|.++++||+..++....+..|..-
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~-----d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~y  167 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSP-----DSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHY  167 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccC-----CCceeeeeeccceEEEEEeccceeEeeccccccc
Confidence            765        2     0  112345678999999999987     5678999999999999999999999999999999


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      +..++|.+-+ .+++-+.|+..+.+.+..........   ..+                                     
T Consensus       168 vqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~---~~~-------------------------------------  207 (434)
T KOG1009|consen  168 VQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHG---LDI-------------------------------------  207 (434)
T ss_pred             cceeecchhhhhhhhhccCcccceeeeeeeeeeeeee---eeE-------------------------------------
Confidence            9999998866 57788888866665544322211110   000                                     


Q ss_pred             heeeeCCCCcEEEEE---eCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee----CCCcE-----EEEe
Q psy2671         421 KYQAQCPEGEKLVSG---SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS----FDKSI-----KLWD  488 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg---~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s----~dg~i-----~lwd  488 (573)
                                +.+-.   ......++|.-++.+.          -...++|+|||.++++.+    .++.+     ++++
T Consensus       208 ----------m~~~~~~~~e~~s~rLfhDeTlks----------FFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfs  267 (434)
T KOG1009|consen  208 ----------MPAKAFNEREGKSTRLFHDETLKS----------FFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFS  267 (434)
T ss_pred             ----------eeecccCCCCcceeeeeecCchhh----------hhhhcccCCCCcEEEcccceeeeCCceeeceeEeec
Confidence                      00000   0111233333222111          134567888888888753    12222     3443


Q ss_pred             CCC-CeEEEeecCCcceEEEEEECC------------------CCCEEEEEeCCCcEEEEeCCcccccccc-cCcCCCEE
Q psy2671         489 GRI-GKFITTLRGHVQAVYMVAWSS------------------DSRLLVSGSADSTLKVWNMKTKKIEQDL-PGHGDEVY  548 (573)
Q Consensus       489 ~~~-~~~~~~~~~h~~~v~~v~~s~------------------dg~~las~s~D~~v~vwd~~~~~~~~~l-~~h~~~v~  548 (573)
                      ... .+....+.+...+...+.|+|                  -+-.+|.++. +.|++||.++.+..... .-|-..|+
T Consensus       268 rk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iT  346 (434)
T KOG1009|consen  268 RKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAIT  346 (434)
T ss_pred             cccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeec-ceEEEeccccccceEEEeeeeeeeec
Confidence            221 233445555555666666665                  2234566665 47999999887655433 34778999


Q ss_pred             EEEEccCCCEEEEeeCCCcEE
Q psy2671         549 AVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       549 ~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      .++|++||..|+..|.||-+-
T Consensus       347 Diaws~dg~~l~vSS~DGyCS  367 (434)
T KOG1009|consen  347 DIAWSDDGSVLLVSSTDGFCS  367 (434)
T ss_pred             ceeecCCCcEEEEeccCCceE
Confidence            999999999999999999653

>KOG0644|consensus

Probab=99.87  E-value=9.3e-22  Score=193.46  Aligned_cols=281  Identities=23%  Similarity=0.390  Sum_probs=213.5

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...|.||...|.|+.|...|.+++||+.|..|+||..+++.++                                     
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~l-------------------------------------  225 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCL-------------------------------------  225 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhh-------------------------------------
Confidence            3567899999999999999999999999999999998887654                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                        .+..||.+.|+.++.+.+..++|++|.|..|++|.+.++.++..+.||++.|++++|+|-- 
T Consensus       226 ------------------As~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~-  286 (1113)
T KOG0644|consen  226 ------------------ASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA-  286 (1113)
T ss_pred             ------------------ccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc-
Confidence                              4567999999999999999999999999999999999999999999999999999999943 


Q ss_pred             eEEEEeeCCeEEEEECCCCcee--cccccCC-cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQI--GQPMRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~--~~~~~~h-~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                         +.+.||++++||.+-.-.+  ..++... ...+..+-     +...+..++|++.|+.-+.|.+...      ..|.
T Consensus       287 ---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~-----~~~~~~~f~Tgs~d~ea~n~e~~~l------~~~~  352 (1113)
T KOG0644|consen  287 ---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSIL-----FENNGDRFLTGSRDGEARNHEFEQL------AWRS  352 (1113)
T ss_pred             ---cCCCCCceEeccccccccccCCCCCCcccccceeeee-----ccccccccccccCCcccccchhhHh------hhhc
Confidence               7889999999998721111  1111111 12233332     2335567899999999888876432      1222


Q ss_pred             ccEEEEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         340 RSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       340 ~~v~~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      ..+.-+..+.+  ....++-.+..+++|++.+|.+.+.+.+|.+.+..+.+++-.                         
T Consensus       353 ~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn-------------------------  407 (1113)
T KOG0644|consen  353 NLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFN-------------------------  407 (1113)
T ss_pred             cceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCC-------------------------
Confidence            22222222211  345667778889999999999999999999988888776531                         


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                                 .....+++.||...+||.-.+........+|.+ +..-+||+||..++....-|.+.|...-
T Consensus       408 -----------~ri~msag~dgst~iwdi~eg~pik~y~~gh~k-l~d~kFSqdgts~~lsd~hgql~i~g~g  468 (1113)
T KOG0644|consen  408 -----------PRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGK-LVDGKFSQDGTSIALSDDHGQLYILGTG  468 (1113)
T ss_pred             -----------cHhhhhccCCCceEeeecccCCcceeeecccce-eeccccCCCCceEecCCCCCceEEeccC
Confidence                       234457889999999998766544444466765 4456999999999988888888888643

>KOG2919|consensus

Probab=99.86  E-value=1.7e-19  Score=159.24  Aligned_cols=290  Identities=23%  Similarity=0.374  Sum_probs=203.6

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      -..++.|||||.-|++-+.|..+++|++-..---.+..+                       .........+.+.     
T Consensus        51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~-----------------------~~~~~~~~~~r~~-----  102 (406)
T KOG2919|consen   51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADG-----------------------PLNFSKHLSYRYQ-----  102 (406)
T ss_pred             hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCC-----------------------ccccccceeEEec-----
Confidence            345678999999999999999999999742100000000                       0000000000000     


Q ss_pred             EEeeccccccCCCCCCCcEEEEEE-------cCCCCeEEEEeCCCeEEEEECCCCeeeEEecC--CCCc---EEEEEEcC
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKF-------SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG--HKHW---VLCIAWSP  259 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~f-------sp~g~~las~s~d~~i~iwd~~~~~~~~~~~~--h~~~---V~~v~~s~  259 (573)
                                    ..+.|...+|       -|+..++|+.+.|.-|++||.-+|+....+.+  |...   ..|++|+|
T Consensus       103 --------------eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~  168 (406)
T KOG2919|consen  103 --------------EGETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSP  168 (406)
T ss_pred             --------------cCCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecC
Confidence                          1233444444       26777899999999999999999987655443  4333   46899999


Q ss_pred             CCCeEEEEeeCCeEEEEEC-CCCceecc------cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         260 DSKQLVSGCKNGVIHAWDS-STGKQIGQ------PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~-~~~~~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      ||.+|++| ....|+++|+ +.|+....      -..+..+.+.+++|+|.    +...++.++....+-||.-...++.
T Consensus       169 DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~----~~~~~a~gsY~q~~giy~~~~~~pl  243 (406)
T KOG2919|consen  169 DGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPM----DSKTLAVGSYGQRVGIYNDDGRRPL  243 (406)
T ss_pred             CCCeEeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCC----CCcceeeecccceeeeEecCCCCce
Confidence            99999865 5678999998 45543211      11244677889999885    3457899999999999988888999


Q ss_pred             EEecCCCccEEEEEECCCc-EEEEEeC-CCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         333 RVLTSHTRSVTCIRWGGSG-LIYSASQ-DRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~~~~-~l~s~s~-d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      ..+.+|.+.|+-+.|.++| .+++|+. |-.|..||++.. .++-.+..|...-+                 ..+.+   
T Consensus       244 ~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TN-----------------QRI~F---  303 (406)
T KOG2919|consen  244 QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTN-----------------QRILF---  303 (406)
T ss_pred             eeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCcc-----------------ceEEE---
Confidence            9999999999999999887 6888875 889999999753 33444444432110                 00111   


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK  482 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg  482 (573)
                                    ...|.++.|++|+.||.|++||+.+..........|...++.|+++|--.++|+++...
T Consensus       304 --------------Dld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr  362 (406)
T KOG2919|consen  304 --------------DLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR  362 (406)
T ss_pred             --------------ecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCce
Confidence                          12377999999999999999999886666666777888999999999988888877543

>KOG1034|consensus

Probab=99.86  E-value=3e-19  Score=158.17  Aligned_cols=314  Identities=22%  Similarity=0.338  Sum_probs=208.9

Q ss_pred             CCCCCCCcEEEEEEcC----CCCeEEEEeCCCeEEEEECCCCe--ee-EEe--cCCCCcEEEEEEcCC----CCeEEEEe
Q psy2671         202 SMPGHAEAVISVKFSP----NGRSLASGSGDTTVRFWDVTTQT--PL-FKC--EGHKHWVLCIAWSPD----SKQLVSGC  268 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp----~g~~las~s~d~~i~iwd~~~~~--~~-~~~--~~h~~~V~~v~~s~d----g~~l~sgs  268 (573)
                      ...+|+.+|..++|++    +...+++..+..++.+|......  .+ ...  ..|......++|+-|    ..++|.|+
T Consensus        33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G  112 (385)
T KOG1034|consen   33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGG  112 (385)
T ss_pred             hhccCCCccceeeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeec
Confidence            3467999999999985    23334444445689999865432  22 221  236666788888754    34789999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCccEEEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT---SHTRSVTCI  345 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~h~~~v~~~  345 (573)
                      .-|.|+|.|+.+++.. ..+.+|...|..+.+.|.    ..++++++|+|.+||+|++.+..++.++.   +|...|.++
T Consensus       113 ~~GvIrVid~~~~~~~-~~~~ghG~sINeik~~p~----~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSv  187 (385)
T KOG1034|consen  113 YLGVIRVIDVVSGQCS-KNYRGHGGSINEIKFHPD----RPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSV  187 (385)
T ss_pred             ceeEEEEEecchhhhc-cceeccCccchhhhcCCC----CCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEE
Confidence            9999999999988765 567899999999999884    34689999999999999999999999875   699999999


Q ss_pred             EECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce-eeCCCCchhhhhhhhhhee
Q psy2671         346 RWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF-KYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       346 ~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  423 (573)
                      .|+.++ .|++++.|.+|++|++........++.      +..++++...+-.+.....+ .+.....+........   
T Consensus       188 D~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~------s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvr---  258 (385)
T KOG1034|consen  188 DFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLEL------SITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVR---  258 (385)
T ss_pred             EEcCCCCeeeccCCcceEEEEecChhHHhhhhhh------hcccCCCCccCcCCccccccccccccccccchHHHHH---
Confidence            999887 799999999999999874322111110      01112211110000000000 0000000000000000   


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCcc-------------ceeeeccccccEEEEE--ECCCCCEEEEeeCCCcEEEEe
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKK-------------SLARMTGHQQLINCVE--FSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~-------------~~~~~~~h~~~v~~v~--~sp~g~~las~s~dg~i~lwd  488 (573)
                         --|+++++-+-++.|..|.+..-..             .+.++.-..-.|.-+.  |.|-++.||.|...|.|.+||
T Consensus       259 ---w~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwd  335 (385)
T KOG1034|consen  259 ---WFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWD  335 (385)
T ss_pred             ---HHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEE
Confidence               1267889999999999998722111             1122222223344454  566788999999999999999


Q ss_pred             CCCCeEE--EeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         489 GRIGKFI--TTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       489 ~~~~~~~--~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ++..+..  .++..  ....|...+||.||.+|+..+.|++|.-||..
T Consensus       336 L~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  336 LDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             CCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            9876542  22221  23568899999999999999999999999853

>KOG1034|consensus

Probab=99.86  E-value=2e-20  Score=165.55  Aligned_cols=258  Identities=19%  Similarity=0.331  Sum_probs=172.4

Q ss_pred             CccccEEEEEEcCC----CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         108 GHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       108 gH~~~V~~l~~s~~----~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .|+..-..++++-|    ..++|.||+-|.|||-|+.++++                                       
T Consensus        87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~---------------------------------------  127 (385)
T KOG1034|consen   87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQC---------------------------------------  127 (385)
T ss_pred             CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhh---------------------------------------
Confidence            47777778888654    35899999999999999987643                                       


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEe---cCCCCcEEEEEEcC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWSP  259 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~---~~h~~~V~~v~~s~  259 (573)
                                      ...+.||...|..+.|.|+. +++++||.|.+||+|++++..++..+   .||.+.|.++.|++
T Consensus       128 ----------------~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~  191 (385)
T KOG1034|consen  128 ----------------SKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSL  191 (385)
T ss_pred             ----------------ccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcC
Confidence                            23456899999999999975 67899999999999999999887765   68999999999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCcee---cc------------------------cccCCcccEEEEEecccccCCCCCEE
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQI---GQ------------------------PMRGHKQWITALSWEPFHLNHQCRRF  312 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~---~~------------------------~~~~h~~~v~~~~~~~~~~~~~~~~l  312 (573)
                      +|.+|+|++.|.++++|++......   ..                        ...-|..+|.++.|       -++++
T Consensus       192 ~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw-------~gd~i  264 (385)
T KOG1034|consen  192 DGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRW-------FGDFI  264 (385)
T ss_pred             CCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHH-------Hhhhe
Confidence            9999999999999999998732210   00                        00123333333333       13455


Q ss_pred             EEEeCCCcEEEEECC-CCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccC
Q psy2671         313 ASSGKDGAIRIWDVI-LSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD  391 (573)
Q Consensus       313 ~s~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~  391 (573)
                      ++-|-++.|..|... .++.+..........         .+                   ...+.-....+.-+.++  
T Consensus       265 lSkscenaI~~w~pgkl~e~~~~vkp~es~~---------Ti-------------------~~~~~~~~c~iWfirf~--  314 (385)
T KOG1034|consen  265 LSKSCENAIVCWKPGKLEESIHNVKPPESAT---------TI-------------------LGEFDYPMCDIWFIRFA--  314 (385)
T ss_pred             eecccCceEEEEecchhhhhhhccCCCccce---------ee-------------------eeEeccCccceEEEEEe--
Confidence            666666666666652 111111110000000         00                   00111111111222221  


Q ss_pred             ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccce-eee--ccccccEEEEEE
Q psy2671         392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL-ARM--TGHQQLINCVEF  468 (573)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~-~~~--~~h~~~v~~v~~  468 (573)
                                                       ..|.++.||.|.+.|.+.+||++...... .++  ......|...+|
T Consensus       315 ---------------------------------~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sf  361 (385)
T KOG1034|consen  315 ---------------------------------FDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSF  361 (385)
T ss_pred             ---------------------------------ecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeee
Confidence                                             12557789999999999999998654421 111  122346888999


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCC
Q psy2671         469 SPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~  490 (573)
                      |.||.+|+....|++|.=||..
T Consensus       362 S~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  362 SRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             cccCcEEEEEeCCCcEEEEEee
Confidence            9999999999999999999853

>KOG4378|consensus

Probab=99.85  E-value=1.2e-19  Score=168.78  Aligned_cols=259  Identities=21%  Similarity=0.265  Sum_probs=192.3

Q ss_pred             EEEEEEcCCCC-eEEEEeCCCeEEEEECCCCe---ee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671         210 VISVKFSPNGR-SLASGSGDTTVRFWDVTTQT---PL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       210 V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~---~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~  284 (573)
                      +.++.|+.... .+|+.++|..+++|.-....   ++ ....|.  .-.|++......++++|+..+.|++||++ .+.+
T Consensus        37 ~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~-~kl~  113 (673)
T KOG4378|consen   37 DFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVACASQSLYEISGGQSGCVKIWDLR-AKLI  113 (673)
T ss_pred             ceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHhhhhcceeeeccCcCceeeehhhH-HHHH
Confidence            78888887653 33556789999999854331   22 222333  23455555555899999999999999998 4555


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-CccEEEEEECCCc--EEEEEeCCCe
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-TRSVTCIRWGGSG--LIYSASQDRT  361 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~--~l~s~s~d~~  361 (573)
                      .+.+++|+..|+++.|+-     ...++|+++..|.|.|..+.++.....+... ...|.-+.+++..  .+.+++++|.
T Consensus       114 hr~lkdh~stvt~v~YN~-----~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~  188 (673)
T KOG4378|consen  114 HRFLKDHQSTVTYVDYNN-----TDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGA  188 (673)
T ss_pred             hhhccCCcceeEEEEecC-----CcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCe
Confidence            677899999999998753     4578999999999999999888766666544 3456677887654  6888999999


Q ss_pred             EEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         362 IKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       362 i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      |.+||......... .+.|..+...+++++.                                    +..+|++.+.|+.
T Consensus       189 VtlwDv~g~sp~~~~~~~HsAP~~gicfsps------------------------------------ne~l~vsVG~Dkk  232 (673)
T KOG4378|consen  189 VTLWDVQGMSPIFHASEAHSAPCRGICFSPS------------------------------------NEALLVSVGYDKK  232 (673)
T ss_pred             EEEEeccCCCcccchhhhccCCcCcceecCC------------------------------------ccceEEEecccce
Confidence            99999876544332 3455555555555432                                    2457899999999


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-eEEEeecCCcceEEEEEECCCC
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~~~v~~v~~s~dg  514 (573)
                      |.+||....+..-.....  .+...|+|+++|.+|+.|...|.|..||++.. ..+.++..|...|++++|-|.-
T Consensus       233 i~~yD~~s~~s~~~l~y~--~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~  305 (673)
T KOG4378|consen  233 INIYDIRSQASTDRLTYS--HPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP  305 (673)
T ss_pred             EEEeecccccccceeeec--CCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence            999998754432222233  35889999999999999999999999999864 5678888999999999998754

>KOG1445|consensus

Probab=99.85  E-value=5.8e-19  Score=168.93  Aligned_cols=139  Identities=30%  Similarity=0.515  Sum_probs=115.8

Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCc------cceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEK------KSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~------~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                      +...||.+++||.|++|.+..+.      .+-..+.+|.+.|+++.|+| -...||++++|-+|++||+++++....|.+
T Consensus       639 D~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~g  718 (1012)
T KOG1445|consen  639 DDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVG  718 (1012)
T ss_pred             ChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheecc
Confidence            56789999999999999876442      23456788999999999999 456899999999999999999999999999


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc-cccccCc-CCCEEEEEEccCCCEEEEeeCCC
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI-EQDLPGH-GDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~-~~~l~~h-~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      |...|..++|||||+.+|+.+.||+|++|+.++++. ++.-++- ..+--.+.|.-||++++..|-|+
T Consensus       719 HtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk  786 (1012)
T KOG1445|consen  719 HTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDK  786 (1012)
T ss_pred             CcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccc
Confidence            999999999999999999999999999999987653 3322221 12334578888999999888875

>KOG2919|consensus

Probab=99.85  E-value=2.5e-19  Score=158.22  Aligned_cols=276  Identities=20%  Similarity=0.342  Sum_probs=199.5

Q ss_pred             EEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee-----cccccC-------CcccEEEEEecccc--cCCCCCEEEEEeC
Q psy2671         252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-----GQPMRG-------HKQWITALSWEPFH--LNHQCRRFASSGK  317 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~-----~~~~~~-------h~~~v~~~~~~~~~--~~~~~~~l~s~~~  317 (573)
                      ...+.|||||..|++-+.|..+.+|++.....-     ......       ....|...+|-+..  ..++..++++.+.
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr  131 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR  131 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence            345789999999999999999999997632110     001111       12346667775422  2245568999999


Q ss_pred             CCcEEEEECCCCeEEEEec--CCCcc---EEEEEECCCcEEEEEeCCCeEEEEeC-CCCeeeEec-------cCCcceee
Q psy2671         318 DGAIRIWDVILSQCVRVLT--SHTRS---VTCIRWGGSGLIYSASQDRTIKVWRA-SDGVMCRTL-------EGHAHWVN  384 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~--~h~~~---v~~~~~~~~~~l~s~s~d~~i~vw~~-~~~~~~~~~-------~~~~~~v~  384 (573)
                      +.-|++||.-+++......  .|...   ..+++|+++|.-+-++..++|++||. +.|.-+...       .+...-+.
T Consensus       132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giis  211 (406)
T KOG2919|consen  132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIIS  211 (406)
T ss_pred             cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhcccccccceee
Confidence            9999999999887655543  24443   35789999997667788999999998 455432211       11122233


Q ss_pred             EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEE
Q psy2671         385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN  464 (573)
Q Consensus       385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~  464 (573)
                      .++++|                                    .+...++.|+....+-|+.-. ++.++..+-+|...|+
T Consensus       212 c~a~sP------------------------------------~~~~~~a~gsY~q~~giy~~~-~~~pl~llggh~gGvT  254 (406)
T KOG2919|consen  212 CFAFSP------------------------------------MDSKTLAVGSYGQRVGIYNDD-GRRPLQLLGGHGGGVT  254 (406)
T ss_pred             eeeccC------------------------------------CCCcceeeecccceeeeEecC-CCCceeeecccCCCee
Confidence            333332                                    134578899988888887643 3456777889999999


Q ss_pred             EEEECCCCCEEEEee-CCCcEEEEeCCCC-eEEEeecCCcc----eEEEEEECCCCCEEEEEeCCCcEEEEeCCc-cccc
Q psy2671         465 CVEFSPDGRIIASAS-FDKSIKLWDGRIG-KFITTLRGHVQ----AVYMVAWSSDSRLLVSGSADSTLKVWNMKT-KKIE  537 (573)
Q Consensus       465 ~v~~sp~g~~las~s-~dg~i~lwd~~~~-~~~~~~~~h~~----~v~~v~~s~dg~~las~s~D~~v~vwd~~~-~~~~  537 (573)
                      .+.|.++|+.|.+|. .|-.|..||++.. ..+..|..|..    +| -+...|+|++||+|+.||.|++||+++ +..+
T Consensus       255 hL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~  333 (406)
T KOG2919|consen  255 HLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVRVWDLKDLGNEV  333 (406)
T ss_pred             eEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceE-EEecCCCCceeeccCCCccEEEEecCCCCCcc
Confidence            999999999999987 4778999999864 45566766654    23 345679999999999999999999988 6667


Q ss_pred             ccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         538 QDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       538 ~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      ..+..|.+-|+.++++|-=..+++++..
T Consensus       334 sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  334 SVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             cccccccccccceecCcccceeeeccCc
Confidence            7788899999999999987777777644

>KOG1538|consensus

Probab=99.85  E-value=7.1e-18  Score=162.46  Aligned_cols=242  Identities=20%  Similarity=0.350  Sum_probs=179.2

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      ....+|.||.|.|.||+++.||+.+|||+.|+.|.||+-.-...+                                   
T Consensus        44 ~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-----------------------------------   88 (1081)
T KOG1538|consen   44 TLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-----------------------------------   88 (1081)
T ss_pred             ccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-----------------------------------
Confidence            345689999999999999999999999999999999985321100                                   


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d  260 (573)
                                            ...|++.|.|+.|+|-...|++++.. ..-+|........ . ......|.+++|..|
T Consensus        89 ----------------------kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~-K-~kss~R~~~CsWtnD  143 (1081)
T KOG1538|consen   89 ----------------------KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS-K-HKSSSRIICCSWTND  143 (1081)
T ss_pred             ----------------------eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH-h-hhhheeEEEeeecCC
Confidence                                  12599999999999999999999865 5778886543221 1 112345788999999


Q ss_pred             CCeEEEEeeCCeEEEEECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      |++++-|-.+|+|.+-+...... ..+...|...+|.+++|+|.......+.++...+..++..+.+.. +.+-.-..-.
T Consensus       144 GqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG-~~Igk~r~L~  222 (1081)
T KOG1538|consen  144 GQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG-KQIGKDRALN  222 (1081)
T ss_pred             CcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc-eeecccccCC
Confidence            99999999999998876433221 122334677899999999976555556788889999988887743 2222111122


Q ss_pred             ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       340 ~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      -...|+.+-++| .++.|+.|+.+++|- +.|..+.++....+||.+++..|+....+....++.+
T Consensus       223 FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTi  287 (1081)
T KOG1538|consen  223 FDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTI  287 (1081)
T ss_pred             CCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCee
Confidence            234677776776 788999999999996 4677788887888999999999988766555555543

>KOG1538|consensus

Probab=99.85  E-value=1.9e-19  Score=173.23  Aligned_cols=277  Identities=19%  Similarity=0.321  Sum_probs=206.5

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM  288 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~  288 (573)
                      .|..++|-|||..|+.+.+ ..+.+||...|..+.++++|++.|.|++|+.||+++|||+.|..|.+|...-..   ...
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG---~Lk   89 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG---ILK   89 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc---eee
Confidence            7899999999998887754 489999999999999999999999999999999999999999999999764322   223


Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeC
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRA  367 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~  367 (573)
                      ..|.+.|.++.|+|..     ..+++++-. ..-+|........+.  .-...+.+.+|..+| .++.|-.+|+|.+-+.
T Consensus        90 YSH~D~IQCMsFNP~~-----h~LasCsLs-dFglWS~~qK~V~K~--kss~R~~~CsWtnDGqylalG~~nGTIsiRNk  161 (1081)
T KOG1538|consen   90 YSHNDAIQCMSFNPIT-----HQLASCSLS-DFGLWSPEQKSVSKH--KSSSRIICCSWTNDGQYLALGMFNGTISIRNK  161 (1081)
T ss_pred             eccCCeeeEeecCchH-----HHhhhcchh-hccccChhhhhHHhh--hhheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence            4799999999999853     346666532 344666543221110  113467888999888 5777889999998764


Q ss_pred             CCCee--eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         368 SDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       368 ~~~~~--~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      .....  +..-.|....|.++++++....                                ...+.++......++-++.
T Consensus       162 ~gEek~~I~Rpgg~Nspiwsi~~~p~sg~--------------------------------G~~di~aV~DW~qTLSFy~  209 (1081)
T KOG1538|consen  162 NGEEKVKIERPGGSNSPIWSICWNPSSGE--------------------------------GRNDILAVADWGQTLSFYQ  209 (1081)
T ss_pred             CCCcceEEeCCCCCCCCceEEEecCCCCC--------------------------------CccceEEEEeccceeEEEE
Confidence            32221  2223456777888888765311                                1235677777888888877


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCc
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADST  525 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~  525 (573)
                      +.....  ..-..-.-.-.|+.+-|+|.+++.|+.|+.+++|- +.|-.+.++-....+|+.++..|++++++.|+.||+
T Consensus       210 LsG~~I--gk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGT  286 (1081)
T KOG1538|consen  210 LSGKQI--GKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGT  286 (1081)
T ss_pred             ecceee--cccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCe
Confidence            653211  11111122346899999999999999999999995 667778887767789999999999999999999999


Q ss_pred             EEEEeCC
Q psy2671         526 LKVWNMK  532 (573)
Q Consensus       526 v~vwd~~  532 (573)
                      |--|++.
T Consensus       287 iACyNl~  293 (1081)
T KOG1538|consen  287 IACYNLI  293 (1081)
T ss_pred             eehhhhH
Confidence            9999874

>KOG0307|consensus

Probab=99.85  E-value=1e-20  Score=193.32  Aligned_cols=247  Identities=21%  Similarity=0.374  Sum_probs=192.2

Q ss_pred             cEEEEEEcCCCCe----EEEEeCCCeEEEEECCCC------eeeEEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEE
Q psy2671         209 AVISVKFSPNGRS----LASGSGDTTVRFWDVTTQ------TPLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWD  277 (573)
Q Consensus       209 ~V~~~~fsp~g~~----las~s~d~~i~iwd~~~~------~~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd  277 (573)
                      .-..++|.+.|..    ||.|..||.|.+||...-      ..+.++..|++.|+.+.|++... .||+|+.||.|.+||
T Consensus        66 rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWD  145 (1049)
T KOG0307|consen   66 RFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWD  145 (1049)
T ss_pred             cceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEec
Confidence            3457889887765    888999999999997652      23556788999999999999665 999999999999999


Q ss_pred             CCCCceeccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc--cEEEEEECCCc--E
Q psy2671         278 SSTGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR--SVTCIRWGGSG--L  352 (573)
Q Consensus       278 ~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~--~  352 (573)
                      +..-+.-... ...-.+.|.+++|+..    ....|++++.+|.+.|||++..+.+-.+..|..  .+..+.|++++  .
T Consensus       146 lnn~~tP~~~~~~~~~~eI~~lsWNrk----vqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTq  221 (1049)
T KOG0307|consen  146 LNKPETPFTPGSQAPPSEIKCLSWNRK----VSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQ  221 (1049)
T ss_pred             cCCcCCCCCCCCCCCcccceEeccchh----hhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCcee
Confidence            9764322111 1123467999999763    335789999999999999998877766665544  34556666654  2


Q ss_pred             EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      +++++.|..                                                                       
T Consensus       222 l~~As~dd~-----------------------------------------------------------------------  230 (1049)
T KOG0307|consen  222 LLVASGDDS-----------------------------------------------------------------------  230 (1049)
T ss_pred             eeeecCCCC-----------------------------------------------------------------------
Confidence            333333221                                                                       


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                           .-.|.+||++.....+..+.+|+..|.++.|.+.+ ++|++++.|+.|.+|+..+++.+..+.....+++.+.|+
T Consensus       231 -----~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~  305 (1049)
T KOG0307|consen  231 -----APVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWC  305 (1049)
T ss_pred             -----CceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeec
Confidence                 01467788776666677778999999999999965 899999999999999999999999999888899999999


Q ss_pred             CCCC-EEEEEeCCCcEEEEeCCccc
Q psy2671         512 SDSR-LLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       512 ~dg~-~las~s~D~~v~vwd~~~~~  535 (573)
                      |... .++.++.||.|-||.+.+..
T Consensus       306 pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  306 PRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             CCCcchhhhheeccceeeeeeecCC
Confidence            9766 78889999999999987654

>KOG0642|consensus

Probab=99.85  E-value=1.3e-20  Score=178.45  Aligned_cols=264  Identities=20%  Similarity=0.376  Sum_probs=186.6

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC--------CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI  273 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~--------~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i  273 (573)
                      ++..|.+.|..++|+|....|++|+.|+++++|++..        -++++++++|.++|.|++..+.+.++++|+-||+|
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I  368 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI  368 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence            5667999999999999999999999999999999932        35789999999999999999999999999999999


Q ss_pred             EEEECCCC---------ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc--cE
Q psy2671         274 HAWDSSTG---------KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR--SV  342 (573)
Q Consensus       274 ~vwd~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~--~v  342 (573)
                      +.|++...         ..+...+.||.+.|..+.+++.     ..+|++++.||++|+|+.....+ .++..-..  --
T Consensus       369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~-----~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~P  442 (577)
T KOG0642|consen  369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSST-----KDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYP  442 (577)
T ss_pred             eeeccCCCCCcccccCcchhccceeccccceeeeeeccc-----ccceeeecCCceEEeeccCCcCc-cccCCccccCCc
Confidence            99966521         1233456799999999887653     35699999999999999866554 22221111  11


Q ss_pred             EEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         343 TCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       343 ~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      ..+.+-...  ..++   +...+.+++.+...                                                
T Consensus       443 lsvd~~ss~~a~~~~---s~~~~~~~~~~~ev------------------------------------------------  471 (577)
T KOG0642|consen  443 LSVDRTSSRPAHSLA---SFRFGYTSIDDMEV------------------------------------------------  471 (577)
T ss_pred             ceEeeccchhHhhhh---hcccccccchhhhh------------------------------------------------
Confidence            112111100  0000   00000000000000                                                


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                             ..          .++++.......     ......++.+...|.+.+..++..|+.|+++|..+++.+.....
T Consensus       472 -------~s----------~~~~~~s~~~~~-----~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a  529 (577)
T KOG0642|consen  472 -------VS----------DLLIFESSASPG-----PRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVA  529 (577)
T ss_pred             -------hh----------heeeccccCCCc-----ccccCccceEEecCCCCeeEecccCCceecccccccccchheee
Confidence                   00          011111000000     00012366778889999999999999999999999999999999


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG  544 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~  544 (573)
                      |...++++++-|+|.+|++++.|+.+++|.+....++.....|.
T Consensus       530 ~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  530 HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             ccceecceeecCCCceEEeecCCceeehhhccchheeecccccc
Confidence            99999999999999999999999999999998777766655554

>KOG1963|consensus

Probab=99.84  E-value=4.9e-17  Score=162.39  Aligned_cols=436  Identities=19%  Similarity=0.224  Sum_probs=261.9

Q ss_pred             cccccccCCCccccEEEEEEcCCC---CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCC
Q psy2671          99 VTRCTSSMPGHAEAVISVKFSPNG---RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTL  175 (573)
Q Consensus        99 ~~~~~~~~~gH~~~V~~l~~s~~~---~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (573)
                      -..|+..|.+|..+++++.+.|..   .++.+++.||+|++||...+..+......-........   -..++.-.... 
T Consensus        46 Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~~~~v~~~~~~---~~~a~~s~~~~-  121 (792)
T KOG1963|consen   46 TGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDNNLPVHALVYK---PAQADISANVY-  121 (792)
T ss_pred             hHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEecCCceeEEEec---hhHhCccceeE-
Confidence            346778999999999999998754   46779999999999999988766444322111110000   00000000000 


Q ss_pred             CccceEEEEEece------e-eEEEee-ccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE---
Q psy2671         176 NTEEVVDIVYQKQ------A-VFQVRP-VTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK---  244 (573)
Q Consensus       176 ~~~~~~~~~~~~~------~-~~~~~~-~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~---  244 (573)
                      ...+..+.....+      . -+.+.. .......+.+|.. -.++.+++.|.+.+.. .+..+.+|....+.....   
T Consensus       122 ~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i~-~~~~~~~~~v~~~~~~~~~~~  199 (792)
T KOG1963|consen  122 VSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGIV-HMCKIHIYFVPKHTKHTSSRD  199 (792)
T ss_pred             eecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEEE-EeeeEEEEEecccceeeccch
Confidence            0000000000000      0 000000 0000011223322 3477888888765555 455788998877552111   


Q ss_pred             -ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC--C-ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCc
Q psy2671         245 -CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST--G-KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA  320 (573)
Q Consensus       245 -~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~--~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~  320 (573)
                       -..|.-.++|.++||.++++|+|..||.|.+|.--.  + +.....+.=|...|.+++|.+     +|.+|.+||..|.
T Consensus       200 ~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~-----~G~~LlSGG~E~V  274 (792)
T KOG1963|consen  200 ITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSS-----DGAYLLSGGREGV  274 (792)
T ss_pred             hhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEec-----CCceEeecccceE
Confidence             124666689999999999999999999999996432  1 111122334667888888865     7889999999999


Q ss_pred             EEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       321 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      +.+|.+.+++ .+.+..-..+|..+.+++++ .......|..|.+-.+.+.....++.|-...-...             
T Consensus       275 Lv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~-------------  340 (792)
T KOG1963|consen  275 LVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPST-------------  340 (792)
T ss_pred             EEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccc-------------
Confidence            9999999887 45566667889999999887 45566779999988776554443333211100000             


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee----c------cccccEEEEEEC
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM----T------GHQQLINCVEFS  469 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~----~------~h~~~v~~v~~s  469 (573)
                                   ......+.......|.-..++-.+..|.|++||+-+........    .      .+.-.++.++.+
T Consensus       341 -------------k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~  407 (792)
T KOG1963|consen  341 -------------KTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARS  407 (792)
T ss_pred             -------------cccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhh
Confidence                         00000111111223445567777788999999987654321110    0      123347778888


Q ss_pred             CCCCEEEEee--------CCC--cEEEEeCCC----CeEEEee-cCCcceEEEEEECC-C-CCEEEEEeCCCcEEEEeCC
Q psy2671         470 PDGRIIASAS--------FDK--SIKLWDGRI----GKFITTL-RGHVQAVYMVAWSS-D-SRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       470 p~g~~las~s--------~dg--~i~lwd~~~----~~~~~~~-~~h~~~v~~v~~s~-d-g~~las~s~D~~v~vwd~~  532 (573)
                      ..|.+++|.-        .||  .+|+|--..    ..+...+ .-|...+...++.+ . ....++++.||.+++|-+.
T Consensus       408 ~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~  487 (792)
T KOG1963|consen  408 RFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFT  487 (792)
T ss_pred             ccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEe
Confidence            8899999863        233  467884322    2222222 34655554444443 2 3378999999999999884


Q ss_pred             cccc----------cccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         533 TKKI----------EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       533 ~~~~----------~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      ..+.          ...-.-|..+++++.|+.||. |+++|.|++|.+|+.
T Consensus       488 ~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGs-lla~s~~~~Itiwd~  537 (792)
T KOG1963|consen  488 DDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGS-LLAVSFDDTITIWDY  537 (792)
T ss_pred             cccccCcCccceEEeeeeccccCcccchhhcCCCc-EEEEecCCEEEEecC
Confidence            3221          111112678899999999995 666888999999974

>KOG0644|consensus

Probab=99.84  E-value=1.1e-20  Score=185.97  Aligned_cols=280  Identities=24%  Similarity=0.403  Sum_probs=207.8

Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ...+.||...|.|+.|...|+++++|+.|..++||...++.++..+.||.+.++.++.+....+++++|.|..|++|.+.
T Consensus       183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~  262 (1113)
T KOG0644|consen  183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP  262 (1113)
T ss_pred             HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence            34567999999999999999999999999999999999999999999999999999999998899999999999999999


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      .+..+ ..+.||++.|++++|+|+         .+.+.||++++||......+.              .+...-++    
T Consensus       263 ~~~pv-svLrghtgavtaiafsP~---------~sss~dgt~~~wd~r~~~~~y--------------~prp~~~~----  314 (1113)
T KOG0644|consen  263 DGAPV-SVLRGHTGAVTAIAFSPR---------ASSSDDGTCRIWDARLEPRIY--------------VPRPLKFT----  314 (1113)
T ss_pred             CCchH-HHHhccccceeeeccCcc---------ccCCCCCceEecccccccccc--------------CCCCCCcc----
Confidence            98766 568899999999999984         356789999999875211000              00000000    


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                               ++.+.                                               .....+..+..+++++.|+
T Consensus       315 ---------~~~~~-----------------------------------------------~s~~~~~~~~~f~Tgs~d~  338 (1113)
T KOG0644|consen  315 ---------EKDLV-----------------------------------------------DSILFENNGDRFLTGSRDG  338 (1113)
T ss_pred             ---------cccce-----------------------------------------------eeeeccccccccccccCCc
Confidence                     00000                                               0001123455677888888


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE-E
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL-L  517 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~-l  517 (573)
                      .-+.|....       +..+...+.-+.++.|- .+.+++-.+..+++|++.+|.+...+.+|...++.+.++|-... .
T Consensus       339 ea~n~e~~~-------l~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~  411 (1113)
T KOG0644|consen  339 EARNHEFEQ-------LAWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIA  411 (1113)
T ss_pred             ccccchhhH-------hhhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhh
Confidence            777775432       11122222223333222 45666777888999999999999999999999999999996554 5


Q ss_pred             EEEeCCCcEEEEeCCcccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .+++.||..-|||+..+..++.. .+| .++...+||+||..++....-|.++|.
T Consensus       412 msag~dgst~iwdi~eg~pik~y~~gh-~kl~d~kFSqdgts~~lsd~hgql~i~  465 (1113)
T KOG0644|consen  412 MSAGYDGSTIIWDIWEGIPIKHYFIGH-GKLVDGKFSQDGTSIALSDDHGQLYIL  465 (1113)
T ss_pred             hhccCCCceEeeecccCCcceeeeccc-ceeeccccCCCCceEecCCCCCceEEe
Confidence            58999999999999887665433 455 566777999999988877777777765

>KOG0322|consensus

Probab=99.84  E-value=6.7e-20  Score=157.43  Aligned_cols=302  Identities=18%  Similarity=0.299  Sum_probs=193.1

Q ss_pred             eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc-CCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         240 TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR-GHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       240 ~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      .+.+.+++|.+.|+|+.|-.+++ |++|..-|.|++|++.+.+.... ++ .+...|+.+.-.|      ++.+.+-+.|
T Consensus         5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~-~r~~g~~~it~lq~~p------~d~l~tqgRd   76 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPL-IRLFGRLFITNLQSIP------NDSLDTQGRD   76 (323)
T ss_pred             CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchh-hhhhccceeeceeecC------CcchhhcCCC
Confidence            46778889999999999988774 99999999999999987665432 33 4556677665443      2568888999


Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC-eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR-TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~-~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      +.+.+|++..+..+..   |.-.++++.|.+.. +...+... .+-.++-+.....+..+  ...-..+.+..+..    
T Consensus        77 ~~L~lw~ia~s~~i~i---~Si~~nslgFCrfS-l~~~~k~~eqll~yp~rgsde~h~~D--~g~~tqv~i~dd~~----  146 (323)
T KOG0322|consen   77 PLLILWTIAYSAFISI---HSIVVNSLGFCRFS-LVKKPKNSEQLLEYPSRGSDETHKQD--GGDTTQVQIADDSE----  146 (323)
T ss_pred             ceEEEEEccCcceEEE---eeeeccccccccce-eccCCCcchhheecCCcccchhhhhc--cCccceeEccCchh----
Confidence            9999999876544332   33333333332211 11111110 11111111000000000  00000111111000    


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc---------ceeeeccccccEEEEEE
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK---------SLARMTGHQQLINCVEF  468 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~---------~~~~~~~h~~~v~~v~~  468 (573)
                                  .+......... ....+..--.+++|-++|.+.+||+..+..         .......|.++|.++.|
T Consensus       147 ------------~~Klgsvmc~~-~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldy  213 (323)
T KOG0322|consen  147 ------------RSKLGSVMCQD-KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDY  213 (323)
T ss_pred             ------------ccccCceeeee-ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeee
Confidence                        00000000000 011122233678888999999999887522         22344568999999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCC--CeE--EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRI--GKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG  544 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~--~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~  544 (573)
                      .+.-..=++|+.+..+..|...-  +.+  ...+.-..-.|..+..-||++.+||++.|+.||||..++...+..|.-|.
T Consensus       214 as~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHs  293 (323)
T KOG0322|consen  214 ASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHS  293 (323)
T ss_pred             chhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhh
Confidence            98766777888888899987642  221  11111122457778899999999999999999999999999999999999


Q ss_pred             CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         545 DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       545 ~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.|++++|+||...+|++|+|++|.+|+
T Consensus       294 agvn~vAfspd~~lmAaaskD~rISLWk  321 (323)
T KOG0322|consen  294 AGVNAVAFSPDCELMAAASKDARISLWK  321 (323)
T ss_pred             cceeEEEeCCCCchhhhccCCceEEeee
Confidence            9999999999999999999999999997

>KOG0642|consensus

Probab=99.83  E-value=6.3e-20  Score=173.76  Aligned_cols=270  Identities=20%  Similarity=0.345  Sum_probs=177.0

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .++..|.+.|..++|+|-...|+|++.||++++|+++....-                               ....   
T Consensus       288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s-------------------------------~~~~---  333 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKS-------------------------------AEKD---  333 (577)
T ss_pred             eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCc-------------------------------cccc---
Confidence            367789999999999999999999999999999999542110                               0000   


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----------eeeEEecCCCCcEE
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----------TPLFKCEGHKHWVL  253 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----------~~~~~~~~h~~~V~  253 (573)
                                   -+...++.+|.++|.|+++++++..+.+|+.||+|+.|++...          .....+.||++.|+
T Consensus       334 -------------~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw  400 (577)
T KOG0642|consen  334 -------------VEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVW  400 (577)
T ss_pred             -------------eeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceecccccee
Confidence                         0112457799999999999999999999999999999965421          12345789999999


Q ss_pred             EEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc--ccEEEEEe---cccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK--QWITALSW---EPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       254 ~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~--~~v~~~~~---~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      .+++|+...+|++++.||+++.|+.......  .+...+  ..-..+.+   .|.+       .++...-+.--++++..
T Consensus       401 ~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~--~f~~~~e~g~Plsvd~~ss~~a~-------~~~s~~~~~~~~~~~ev  471 (577)
T KOG0642|consen  401 LLALSSTKDRLLSCSSDGTVRLWEPTEESPC--TFGEPKEHGYPLSVDRTSSRPAH-------SLASFRFGYTSIDDMEV  471 (577)
T ss_pred             eeeecccccceeeecCCceEEeeccCCcCcc--ccCCccccCCcceEeeccchhHh-------hhhhcccccccchhhhh
Confidence            9999999999999999999999998655431  111111  11112221   1111       11111111111222222


Q ss_pred             CeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       329 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                      ...++.+.                   .+.+...+.++.               ++                        
T Consensus       472 ~s~~~~~~-------------------s~~~~~~~~~~~---------------in------------------------  493 (577)
T KOG0642|consen  472 VSDLLIFE-------------------SSASPGPRRYPQ---------------IN------------------------  493 (577)
T ss_pred             hhheeecc-------------------ccCCCcccccCc---------------cc------------------------
Confidence            22221111                   111111110000               00                        


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                                   .....|.+.+.+++.+|+.|+++|..++. .+.....|...++++++.|+|-+|++++.|+.+++|.
T Consensus       494 -------------~vVs~~~~~~~~~~hed~~Ir~~dn~~~~-~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~k  559 (577)
T KOG0642|consen  494 -------------KVVSHPTADITFTAHEDRSIRFFDNKTGK-ILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWK  559 (577)
T ss_pred             -------------eEEecCCCCeeEecccCCceecccccccc-cchheeeccceecceeecCCCceEEeecCCceeehhh
Confidence                         00112556677888888888888866543 4555667888999999999999999999999999999


Q ss_pred             CCCCeEEEeecCC
Q psy2671         489 GRIGKFITTLRGH  501 (573)
Q Consensus       489 ~~~~~~~~~~~~h  501 (573)
                      .....++.....|
T Consensus       560 ld~k~~~~es~~~  572 (577)
T KOG0642|consen  560 LDVKTCVLESTAH  572 (577)
T ss_pred             ccchheeeccccc
Confidence            8776666555555

>KOG0307|consensus

Probab=99.83  E-value=5.8e-20  Score=187.95  Aligned_cols=276  Identities=23%  Similarity=0.475  Sum_probs=193.4

Q ss_pred             EEEEcCCCC-eEEEE----------eCCCeEEEEECCCC--e----eeEEecCCCCcEEEEEEcCCCCe----EEEEeeC
Q psy2671         212 SVKFSPNGR-SLASG----------SGDTTVRFWDVTTQ--T----PLFKCEGHKHWVLCIAWSPDSKQ----LVSGCKN  270 (573)
Q Consensus       212 ~~~fsp~g~-~las~----------s~d~~i~iwd~~~~--~----~~~~~~~h~~~V~~v~~s~dg~~----l~sgs~d  270 (573)
                      .++|||++. ++|+|          +.+.++-||.+...  .    ++..+. -....+.++|.+.|..    ||.|..|
T Consensus        11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ed   89 (1049)
T KOG0307|consen   11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLED   89 (1049)
T ss_pred             eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccC
Confidence            467888876 44443          34556677765422  2    221221 2234689999987765    8889999


Q ss_pred             CeEEEEECCC---Cce--ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCccEE
Q psy2671         271 GVIHAWDSST---GKQ--IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVT  343 (573)
Q Consensus       271 g~i~vwd~~~---~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~  343 (573)
                      |.|.+||...   +..  +......|++.|.++.|+++    .++.+|+|+.||.|.|||+..-+.-....  .-...|.
T Consensus        90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~----q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~  165 (1049)
T KOG0307|consen   90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPF----QGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIK  165 (1049)
T ss_pred             CceEEecchhhccCcchHHHhhhcccCCceeeeecccc----CCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccce
Confidence            9999999865   211  22345679999999999986    35689999999999999997633222221  1234566


Q ss_pred             EEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         344 CIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       344 ~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      +++|+..-  .+++++.+|..-|||                                                       
T Consensus       166 ~lsWNrkvqhILAS~s~sg~~~iWD-------------------------------------------------------  190 (1049)
T KOG0307|consen  166 CLSWNRKVSHILASGSPSGRAVIWD-------------------------------------------------------  190 (1049)
T ss_pred             EeccchhhhHHhhccCCCCCceecc-------------------------------------------------------
Confidence            77765431  344444444555554                                                       


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc--ccEEEEEECCCCC-EEEEeeCCC---cEEEEeCCCC-eE
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ--QLINCVEFSPDGR-IIASASFDK---SIKLWDGRIG-KF  494 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~--~~v~~v~~sp~g~-~las~s~dg---~i~lwd~~~~-~~  494 (573)
                                              ++..+. +..+..+.  ..+..++|+|+.. .|++++.|.   .|.+||+|.- ..
T Consensus       191 ------------------------lr~~~p-ii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP  245 (1049)
T KOG0307|consen  191 ------------------------LRKKKP-IIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSP  245 (1049)
T ss_pred             ------------------------ccCCCc-ccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCc
Confidence                                    443321 11121111  2367899999764 456665543   5999998753 45


Q ss_pred             EEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCC-EEEEeeCCCcEEEcc
Q psy2671         495 ITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE-KVASGGKDKVLRLWQ  572 (573)
Q Consensus       495 ~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~-~l~s~~~d~~i~iw~  572 (573)
                      ++++.+|..+|.++.|++.+ ++|+|++.|+.|..|+.++++.+..+....+-++.+.|.|..- .++.++-||.|.|+.
T Consensus       246 ~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~s  325 (1049)
T KOG0307|consen  246 LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYS  325 (1049)
T ss_pred             hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeee
Confidence            67889999999999999966 8999999999999999999999999998888899999999765 678889999999874

>KOG4227|consensus

Probab=99.82  E-value=2.6e-18  Score=155.50  Aligned_cols=304  Identities=19%  Similarity=0.292  Sum_probs=199.0

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      |.+.+.+|.+.|.++.||.++++||+|+.|..++||+++..-.- +                                  
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~-k----------------------------------   92 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVR-K----------------------------------   92 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhh-c----------------------------------
Confidence            56678899999999999999999999999999999998632000 0                                  


Q ss_pred             EEEEeceeeEEEeecccccc-CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEc
Q psy2671         182 DIVYQKQAVFQVRPVTRCTS-SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWS  258 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~-~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s  258 (573)
                                    ..+.+. .-..|...|.|++|....+.+.+|+.+++|...|+.+.+.+....  ...+.|+.+..+
T Consensus        93 --------------~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~  158 (609)
T KOG4227|consen   93 --------------TPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQH  158 (609)
T ss_pred             --------------CCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccC
Confidence                          000000 112467899999999999999999999999999999988776653  234589999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceeccc-cc-CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEE-
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQP-MR-GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRV-  334 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~-~~-~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~-  334 (573)
                      |-.+.|++.+.++.|.+||.+.......+ +. ........+.|+|..    ..+|++.+..+-+.+||.+..+. +.. 
T Consensus       159 P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~----P~Li~~~~~~~G~~~~D~R~~~~~~~~~  234 (609)
T KOG4227|consen  159 PTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET----PALILVNSETGGPNVFDRRMQARPVYQR  234 (609)
T ss_pred             CCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCC----ceeEEeccccCCCCceeeccccchHHhh
Confidence            99999999999999999998765421111 11 122344566676642    35788999999999999865432 111 


Q ss_pred             -----ecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         335 -----LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       335 -----~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                           +......-..+.|+++| .+++--....=.+||+-...+......|         ++++..-...          
T Consensus       235 ~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~---------N~~GY~N~~T----------  295 (609)
T KOG4227|consen  235 SMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDH---------NPNGYCNIKT----------  295 (609)
T ss_pred             hccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccC---------CCCcceeeee----------
Confidence                 11111122456677766 3333322222233443222111000000         0100000000          


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC----------------------ccceeeeccccccEEEE
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE----------------------KKSLARMTGHQQLINCV  466 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~----------------------~~~~~~~~~h~~~v~~v  466 (573)
                                 .+. ....+...+++|+++-.|.+|.+...                      ...+..+.||...++.|
T Consensus       296 -----------~KS-~~F~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQV  363 (609)
T KOG4227|consen  296 -----------IKS-MTFIDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQV  363 (609)
T ss_pred             -----------eee-eeeecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccce
Confidence                       000 00123345889999999999975321                      12345678999999999


Q ss_pred             EECCCCCEEEEeeCCCcEEEEeC
Q psy2671         467 EFSPDGRIIASASFDKSIKLWDG  489 (573)
Q Consensus       467 ~~sp~g~~las~s~dg~i~lwd~  489 (573)
                      .|+|...+|++.+....++||..
T Consensus       364 RF~~H~~~l~SSGVE~~~KlWS~  386 (609)
T KOG4227|consen  364 RFSQHNNLLVSSGVENSFKLWSD  386 (609)
T ss_pred             eecCCcceEeccchhhheecccc
Confidence            99999999999999999999963

>KOG4328|consensus

Probab=99.82  E-value=6.4e-19  Score=162.73  Aligned_cols=244  Identities=20%  Similarity=0.368  Sum_probs=178.4

Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC----eEEEEecCCCccEEEEEECCCc--EEEEEeCCCe
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS----QCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRT  361 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~  361 (573)
                      .+-+...|+++.|.|..   .-..+++|+..|+|-+||+.+.    .-+..+..|..+|.++.|++.+  .+++.|.||+
T Consensus       182 ~kv~~~Rit~l~fHPt~---~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt  258 (498)
T KOG4328|consen  182 AKVTDRRITSLAFHPTE---NRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT  258 (498)
T ss_pred             eEecccceEEEEecccC---cceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce
Confidence            44577889999999853   3357889999999999999532    2355678899999999998865  7999999999


Q ss_pred             EEEEeCCCCeeeEeccC--CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         362 IKVWRASDGVMCRTLEG--HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      |++-|++.+.....+.-  ...+...+.++                                     .+...++.+..=|
T Consensus       259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~-------------------------------------~e~~~vl~~~~~G  301 (498)
T KOG4328|consen  259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFS-------------------------------------AESRSVLFGDNVG  301 (498)
T ss_pred             eeeeeecchhhHHHhhcCccceeeeecccc-------------------------------------CCCccEEEeeccc
Confidence            99999876543221111  11111111111                                     2233445555555


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCe----EEEeecCCcceEEEEEECCCC
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGK----FITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~----~~~~~~~h~~~v~~v~~s~dg  514 (573)
                      ...+||++..+.....+.-|...|.+|+++|. -.+||++|.|++++|||++...    .+...-.|...|.++.|||++
T Consensus       302 ~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~  381 (498)
T KOG4328|consen  302 NFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSG  381 (498)
T ss_pred             ceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCC
Confidence            88999999888777777888889999999995 4689999999999999987532    123334699999999999999


Q ss_pred             CEEEEEeCCCcEEEEeCC----cccccccccCcCC------CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         515 RLLVSGSADSTLKVWNMK----TKKIEQDLPGHGD------EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ~~las~s~D~~v~vwd~~----~~~~~~~l~~h~~------~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..|++.+.|+.|+|||..    .-.....+. |..      ......|.||..++++|-.-..|-+++
T Consensus       382 gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~  448 (498)
T KOG4328|consen  382 GTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFD  448 (498)
T ss_pred             CceEeeccCCceEEeecccccccCCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEc
Confidence            889999999999999984    222222222 322      234678999999999887777777664

>KOG4227|consensus

Probab=99.82  E-value=2e-18  Score=156.23  Aligned_cols=288  Identities=17%  Similarity=0.257  Sum_probs=198.3

Q ss_pred             cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC------CCeeeEEec-CCCCcEEEEEEcCCCCeEEEEeeCC
Q psy2671         199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT------TQTPLFKCE-GHKHWVLCIAWSPDSKQLVSGCKNG  271 (573)
Q Consensus       199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~------~~~~~~~~~-~h~~~V~~v~~s~dg~~l~sgs~dg  271 (573)
                      |..-+.+|.+.|.++.||-++++||+|+.|..+++|++.      +.+++.... .|...|.|++|....+.|++|..++
T Consensus        48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~  127 (609)
T KOG4227|consen   48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG  127 (609)
T ss_pred             hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc
Confidence            556678999999999999999999999999999999975      345554433 4568899999999999999999999


Q ss_pred             eEEEEECCCCceecccccCCc---ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-EEEE--ecCCCccEEEE
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHK---QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-CVRV--LTSHTRSVTCI  345 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~--~~~h~~~v~~~  345 (573)
                      +|..-|+++...+..  ..|.   +.|+.+...|.     .+.|++.+.++.|.+||.+..+ ....  +.........+
T Consensus       128 ~VI~HDiEt~qsi~V--~~~~~~~~~VY~m~~~P~-----DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~  200 (609)
T KOG4227|consen  128 TVIKHDIETKQSIYV--ANENNNRGDVYHMDQHPT-----DNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTA  200 (609)
T ss_pred             eeEeeecccceeeee--ecccCcccceeecccCCC-----CceEEEEecCceEEEEeccCCCCCCceeeecCCCccceee
Confidence            999999998766532  2343   37888877663     4689999999999999986543 1110  00111111222


Q ss_pred             EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .|.|.                                                                           
T Consensus       201 ~F~P~---------------------------------------------------------------------------  205 (609)
T KOG4227|consen  201 EFHPE---------------------------------------------------------------------------  205 (609)
T ss_pred             eecCC---------------------------------------------------------------------------
Confidence            22221                                                                           


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeee------ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARM------TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~------~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                        ...+|++.+..+-+-+||.+....++.+.      ......-.++.|+|.|..+.+--....-.+||.-+.++ .+|+
T Consensus       206 --~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~-~V~k  282 (609)
T KOG4227|consen  206 --TPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRC-FVLK  282 (609)
T ss_pred             --CceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccc-eeEe
Confidence              12345555555666666665443332211      11111235678999998887765544556677665433 2222


Q ss_pred             -CCc-------ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc-----------------------cccccccCcCCCEE
Q psy2671         500 -GHV-------QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-----------------------KIEQDLPGHGDEVY  548 (573)
Q Consensus       500 -~h~-------~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~-----------------------~~~~~l~~h~~~v~  548 (573)
                       .|.       ..+.+++|-.|. .+++|+.+-.|++|.+...                       +.+..|+||..-++
T Consensus       283 ~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~N  361 (609)
T KOG4227|consen  283 SDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPN  361 (609)
T ss_pred             ccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccccccc
Confidence             222       245567777664 4899999999999987421                       12335789999999


Q ss_pred             EEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         549 AVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       549 ~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+.|+|....|++.|..+.++||.
T Consensus       362 QVRF~~H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  362 QVRFSQHNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             ceeecCCcceEeccchhhheeccc
Confidence            999999999999999999999996

>KOG1007|consensus

Probab=99.81  E-value=5.6e-18  Score=147.49  Aligned_cols=158  Identities=26%  Similarity=0.438  Sum_probs=129.6

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee-eEEe-----cCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP-LFKC-----EGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~-~~~~-----~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vw  276 (573)
                      .|-+.|.|+.|.|++..+|+-. |..|.+|++..... ...+     .+|+...++-+|||  ||..+++ ..|+++..|
T Consensus       121 eavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~  198 (370)
T KOG1007|consen  121 EAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFW  198 (370)
T ss_pred             HHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCCcEEEE
Confidence            3456899999999999988875 88999999987654 2222     24566788889998  7877776 457899999


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEEecCCCccEEEEEECCC--cEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRVLTSHTRSVTCIRWGGS--GLI  353 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~--~~l  353 (573)
                      |+++.++....-.+|...|..+.|+|.    ..-.|+++|.||.||+||.+. ..++..+.+|...|.++.|++.  ..|
T Consensus       199 D~RT~~~~~sI~dAHgq~vrdlDfNpn----kq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLi  274 (370)
T KOG1007|consen  199 DLRTMKKNNSIEDAHGQRVRDLDFNPN----KQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLI  274 (370)
T ss_pred             EccchhhhcchhhhhcceeeeccCCCC----ceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEE
Confidence            999887776677789889999999884    224799999999999999975 4578889999999999999875  589


Q ss_pred             EEEeCCCeEEEEeCC
Q psy2671         354 YSASQDRTIKVWRAS  368 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~  368 (573)
                      ++|+.|..+.+|...
T Consensus       275 Ls~~SDs~V~Lsca~  289 (370)
T KOG1007|consen  275 LSGGSDSAVNLSCAS  289 (370)
T ss_pred             EecCCCceeEEEecc
Confidence            999999999999754

>KOG1007|consensus

Probab=99.81  E-value=8.9e-18  Score=146.28  Aligned_cols=248  Identities=22%  Similarity=0.399  Sum_probs=169.2

Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCC-------CcEEEEECCCC---------eEEEEec-CCCccEEEEEEC
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-------GAIRIWDVILS---------QCVRVLT-SHTRSVTCIRWG  348 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~---------~~~~~~~-~h~~~v~~~~~~  348 (573)
                      +.+..|.+.|..++-.|+    +.+.|+|+-.+       -.+-||.+...         +++..+. .+-+.|.|+.|.
T Consensus        57 kvf~h~agEvw~las~P~----d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~  132 (370)
T KOG1007|consen   57 KVFFHHAGEVWDLASSPF----DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWE  132 (370)
T ss_pred             hhhhcCCcceehhhcCCC----CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEc
Confidence            344555666776666664    23455555331       23568887542         1233333 455689999999


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCCeee-EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      |++.-+.+=.|..|.+|++..+... ..+.          .+..        ......+.              ...++|
T Consensus       133 Pns~klasm~dn~i~l~~l~ess~~vaev~----------ss~s--------~e~~~~ft--------------sg~Wsp  180 (370)
T KOG1007|consen  133 PNSDKLASMDDNNIVLWSLDESSKIVAEVL----------SSES--------AEMRHSFT--------------SGAWSP  180 (370)
T ss_pred             CCCCeeEEeccCceEEEEcccCcchheeec----------cccc--------ccccceec--------------ccccCC
Confidence            9875444445999999998876431 1110          0000        00000000              001122


Q ss_pred             --CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCCC-eEEEeecCCcc
Q psy2671         428 --EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIG-KFITTLRGHVQ  503 (573)
Q Consensus       428 --~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~~-~~~~~~~~h~~  503 (573)
                        ++..+++ ..|++++.||+++..+....-..|...|..+.|+|+-+ +|++++.||.|++||.+.. ..++.+.+|.-
T Consensus       181 HHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsH  259 (370)
T KOG1007|consen  181 HHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSH  259 (370)
T ss_pred             CCccceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCce
Confidence              4555554 46899999999988777777778988999999999865 6889999999999999864 56888999999


Q ss_pred             eEEEEEECCC-CCEEEEEeCCCcEEEEeCCccc-----------------------------ccccccCcCCCEEEEEEc
Q psy2671         504 AVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKK-----------------------------IEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       504 ~v~~v~~s~d-g~~las~s~D~~v~vwd~~~~~-----------------------------~~~~l~~h~~~v~~~~~s  553 (573)
                      +|+++.|.|. .+++++||.|..|.+|...+-.                             .+.++..|.+.|++++||
T Consensus       260 WvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWS  339 (370)
T KOG1007|consen  260 WVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWS  339 (370)
T ss_pred             EEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeec
Confidence            9999999994 5788999999999999764211                             123466799999999999


Q ss_pred             cCCCE-EEEeeCCCcEEE
Q psy2671         554 PDGEK-VASGGKDKVLRL  570 (573)
Q Consensus       554 ~d~~~-l~s~~~d~~i~i  570 (573)
                      .-..+ +||-|-||.+-|
T Consensus       340 sadPWiFASLSYDGRviI  357 (370)
T KOG1007|consen  340 SADPWIFASLSYDGRVII  357 (370)
T ss_pred             cCCCeeEEEeccCceEEe
Confidence            86666 567899998765

>KOG1188|consensus

Probab=99.81  E-value=3.3e-18  Score=152.51  Aligned_cols=280  Identities=18%  Similarity=0.303  Sum_probs=194.7

Q ss_pred             CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671         123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS  202 (573)
Q Consensus       123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (573)
                      +.+|++-..|+||++|..++..+-                                                       .
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~-------------------------------------------------------~   65 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLE-------------------------------------------------------E   65 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhh-------------------------------------------------------e
Confidence            567888888999999998875442                                                       2


Q ss_pred             CCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeee--EEecCCC-CcEEEEEEcCCCCeEEEEee----CCeE
Q psy2671         203 MPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHK-HWVLCIAWSPDSKQLVSGCK----NGVI  273 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~--~~~~~h~-~~V~~v~~s~dg~~l~sgs~----dg~i  273 (573)
                      +.||...+..++|..  ....+.+|+.||+|++||+++....  .....+. .+..|++-+-.++.+++|..    +-.|
T Consensus        66 fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v  145 (376)
T KOG1188|consen   66 FKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASV  145 (376)
T ss_pred             ecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEE
Confidence            456667777888866  3567899999999999999876443  3445555 56788888777888888764    5679


Q ss_pred             EEEECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE---EEEecCCCccEEEEEECC
Q psy2671         274 HAWDSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC---VRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       274 ~vwd~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~h~~~v~~~~~~~  349 (573)
                      .+||++..++ ++.....|.+-|+.++|.|.    +.+.|++||.||-|.++|+.....   +.....|...|.++.|.+
T Consensus       146 ~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~----~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~  221 (376)
T KOG1188|consen  146 VLWDVRSEQQLLRQLNESHNDDVTQLRFHPS----DPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLS  221 (376)
T ss_pred             EEEEeccccchhhhhhhhccCcceeEEecCC----CCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeec
Confidence            9999998776 66667789999999999984    456899999999999999875432   222335677899999998


Q ss_pred             Cc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe--eee
Q psy2671         350 SG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY--QAQ  425 (573)
Q Consensus       350 ~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  425 (573)
                      ++  .|++-+...+..+|+++.+.....+....     +...                       .........|  ...
T Consensus       222 ~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~-----~~~~-----------------------d~r~~~~~dY~I~~~  273 (376)
T KOG1188|consen  222 KKYKRIMCLTHMETFAIYELEDGSEETWLENPD-----VSAD-----------------------DLRKEDNCDYVINEH  273 (376)
T ss_pred             CCcceEEEEEccCceeEEEccCCChhhcccCcc-----chhh-----------------------hHHhhhhhhheeecc
Confidence            87  79999999999999998875332221100     0000                       0000000001  111


Q ss_pred             CCC-CcEEEEEeC-CCeEEEEcCC---C--Cccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671         426 CPE-GEKLVSGSD-DFTLFLWNPE---K--EKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDG  489 (573)
Q Consensus       426 ~~~-~~~l~sg~~-dg~i~lwd~~---~--~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~  489 (573)
                      +|. +...+.++. -++..++-+.   +  .......+.+ |.+.|+++.|...+.++.+|+.||.+.+|..
T Consensus       274 ~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  274 SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV  345 (376)
T ss_pred             cCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence            232 334444444 4555554332   1  1223344444 7778899999999999999999999999974

>KOG1188|consensus

Probab=99.79  E-value=7.3e-18  Score=150.32  Aligned_cols=270  Identities=18%  Similarity=0.268  Sum_probs=183.8

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEEECCCCceeccc-ccCCc-ccE
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWDSSTGKQIGQP-MRGHK-QWI  295 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd~~~~~~~~~~-~~~h~-~~v  295 (573)
                      ..+|++...|+|++||..++..+..+++|...++.+.|..  ....+.+|+.||+|++||++...+.... ...+. ..-
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            4588888999999999999999999999999999999976  3457899999999999999876554332 22333 122


Q ss_pred             EEEEecccccCCCCCEEEEEe----CCCcEEEEECCCCeE-EEE-ecCCCccEEEEEECCC--cEEEEEeCCCeEEEEeC
Q psy2671         296 TALSWEPFHLNHQCRRFASSG----KDGAIRIWDVILSQC-VRV-LTSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRA  367 (573)
Q Consensus       296 ~~~~~~~~~~~~~~~~l~s~~----~dg~v~iwd~~~~~~-~~~-~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~vw~~  367 (573)
                      .++     ..+...+.+++|.    .+..|.+||.+..+. ++. ...|...|++++|.|.  +++++||-||.+.+||+
T Consensus       121 ~~l-----d~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~  195 (376)
T KOG1188|consen  121 ICL-----DLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDT  195 (376)
T ss_pred             eEe-----eccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeec
Confidence            222     2333445666653    467899999987655 444 4578999999999765  37888888888888876


Q ss_pred             CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671         368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE  447 (573)
Q Consensus       368 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~  447 (573)
                      ....                                                                            
T Consensus       196 ~~d~----------------------------------------------------------------------------  199 (376)
T KOG1188|consen  196 KKDN----------------------------------------------------------------------------  199 (376)
T ss_pred             CCCc----------------------------------------------------------------------------
Confidence            4210                                                                            


Q ss_pred             CCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------cceEEEEEECCC
Q psy2671         448 KEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTLRGH-------------VQAVYMVAWSSD  513 (573)
Q Consensus       448 ~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------~~~v~~v~~s~d  513 (573)
                       ....+.....|...|.++.|..++ +.|.+-+..++..+|+...+.....+...             ..-|.+. ...+
T Consensus       200 -EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~-~~~~  277 (376)
T KOG1188|consen  200 -EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEH-SPGD  277 (376)
T ss_pred             -chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecc-cCCC
Confidence             001122233456678899998776 45778888999999998877643333211             0011111 1224


Q ss_pred             CCEEEEEeC-CCcEEEEeCC---cc---cccccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         514 SRLLVSGSA-DSTLKVWNMK---TK---KIEQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s~-D~~v~vwd~~---~~---~~~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ....+.++. -+...++-+.   ++   +.+..+.| |.+-|.++-|-..+..|.|||+||.+.+|+
T Consensus       278 ~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk  344 (376)
T KOG1188|consen  278 KDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK  344 (376)
T ss_pred             cceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence            455555555 5555555443   22   23445666 666678888888889999999999999997

>KOG1334|consensus

Probab=99.79  E-value=1.9e-18  Score=160.90  Aligned_cols=306  Identities=23%  Similarity=0.364  Sum_probs=222.2

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...|.+|.+.|..|.|...|..|+|||.|.+|.+||..++.+...                                  
T Consensus       134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~----------------------------------  179 (559)
T KOG1334|consen  134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLS----------------------------------  179 (559)
T ss_pred             hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccc----------------------------------
Confidence            4567889999999999999999999999999999999988765421                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCC-Ce--eeEEecCCCCcEEEEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTT-QT--PLFKCEGHKHWVLCIA  256 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~-~~--~~~~~~~h~~~V~~v~  256 (573)
                                          -..||...|....|-|.  .+.+++++.||.+++=.+.. +.  ....+..|.+.|.-++
T Consensus       180 --------------------f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhkla  239 (559)
T KOG1334|consen  180 --------------------FESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLA  239 (559)
T ss_pred             --------------------cccccccchhhhhccCCCCCcCceeccccCceeeeeeccccceecceecccccCccceee
Confidence                                13589999999999884  56799999999999977543 21  2345567889999999


Q ss_pred             EcCCCC-eEEEEeeCCeEEEEECCCCceecccc--cCCcc---cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671         257 WSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPM--RGHKQ---WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ  330 (573)
Q Consensus       257 ~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~--~~h~~---~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  330 (573)
                      .-|+.. -|.+++.|+.+.-.|++.+.......  ..++.   ....++..|.    ....+++++.|..+|+||.+.-.
T Consensus       240 v~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~----nt~~faVgG~dqf~RvYD~R~~~  315 (559)
T KOG1334|consen  240 VEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPR----NTNEFAVGGSDQFARVYDQRRID  315 (559)
T ss_pred             ecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCC----CccccccCChhhhhhhhcccchh
Confidence            988765 48899999999999988765432211  12222   4566666663    33479999999999999986532


Q ss_pred             E------EEEecC------CCccEEEEEEC-CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         331 C------VRVLTS------HTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       331 ~------~~~~~~------h~~~v~~~~~~-~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      .      +..+..      ..-.|+|++++ +.+.++++..|-.|.++...-+....               +       
T Consensus       316 ~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~---------------p-------  373 (559)
T KOG1334|consen  316 KEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSE---------------P-------  373 (559)
T ss_pred             hccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCC---------------C-------
Confidence            2      122221      23468999998 44578888888888877432211000               0       


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee-eccccc--cEEEEE-ECCCCC
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQ--LINCVE-FSPDGR  473 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~-~~~h~~--~v~~v~-~sp~g~  473 (573)
                               .+..                |.                     ...... .+||..  .|..|- |-|...
T Consensus       374 ---------~~~s----------------~~---------------------~~~~k~vYKGHrN~~TVKgVNFfGPrsE  407 (559)
T KOG1334|consen  374 ---------DPSS----------------PR---------------------EQYVKRVYKGHRNSRTVKGVNFFGPRSE  407 (559)
T ss_pred             ---------CCCc----------------ch---------------------hhccchhhcccccccccceeeeccCccc
Confidence                     0000                00                     000111 334433  355555 468889


Q ss_pred             EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ++++||.=|.|.||+-.+++.++.+.+...-|+|+.-+|--..||+++-|.-||||...+
T Consensus       408 yVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~  467 (559)
T KOG1334|consen  408 YVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLT  467 (559)
T ss_pred             eEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCc
Confidence            999999999999999999999999988777899999999999999999999999998744

>KOG1310|consensus

Probab=99.79  E-value=2.1e-17  Score=155.95  Aligned_cols=211  Identities=24%  Similarity=0.395  Sum_probs=151.6

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..|.||++.|.|++|+.+|.+|||||.|-.+.|||....++++.                                    
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~Kllhs------------------------------------   87 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHS------------------------------------   87 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeee------------------------------------
Confidence            35789999999999999999999999999999999875544421                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCC----------CeeeEEecCCCCc
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTT----------QTPLFKCEGHKHW  251 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~----------~~~~~~~~~h~~~  251 (573)
                                        .-.||...|.|+.|-|  +.+.+++|++|..|+++|+..          .++.+.+..|...
T Consensus        88 ------------------I~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~r  149 (758)
T KOG1310|consen   88 ------------------ISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDR  149 (758)
T ss_pred             ------------------eecccccceeEEeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhh
Confidence                              2358999999999998  467899999999999999974          2344556778999


Q ss_pred             EEEEEEcCCC-CeEEEEeeCCeEEEEECCCCceecccc---------cCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         252 VLCIAWSPDS-KQLVSGCKNGVIHAWDSSTGKQIGQPM---------RGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       252 V~~v~~s~dg-~~l~sgs~dg~i~vwd~~~~~~~~~~~---------~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                      |..++-.|++ ..+.+++.||+|+-+|++....-....         ...--...++..+|.    ...+|+.|+.|-..
T Consensus       150 VKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~----rp~~laVGgsdpfa  225 (758)
T KOG1310|consen  150 VKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPS----RPYYLAVGGSDPFA  225 (758)
T ss_pred             hhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeeeeecCC----CCceEEecCCCchh
Confidence            9999999998 678899999999999987632111100         111123455666653    34689999999999


Q ss_pred             EEEECCCC------------------eEEEEe-cCCC--------cc---EEEEEECCCcE-EEEEeCCCeEEEEeCCCC
Q psy2671         322 RIWDVILS------------------QCVRVL-TSHT--------RS---VTCIRWGGSGL-IYSASQDRTIKVWRASDG  370 (573)
Q Consensus       322 ~iwd~~~~------------------~~~~~~-~~h~--------~~---v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~  370 (573)
                      |+||.+..                  .+++.+ .+|.        ..   ++-+.|+|+|. ++..-....|.++++..+
T Consensus       226 rLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~  305 (758)
T KOG1310|consen  226 RLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNED  305 (758)
T ss_pred             hhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCC
Confidence            99994210                  122222 2232        12   45567788874 444444456888888765


Q ss_pred             ee
Q psy2671         371 VM  372 (573)
Q Consensus       371 ~~  372 (573)
                      +.
T Consensus       306 ~~  307 (758)
T KOG1310|consen  306 KS  307 (758)
T ss_pred             CC
Confidence            43

>KOG0303|consensus

Probab=99.79  E-value=5.4e-18  Score=153.77  Aligned_cols=211  Identities=22%  Similarity=0.384  Sum_probs=153.0

Q ss_pred             cCCCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .+-||+++|..++|+| +...|||||.|.+|.||.+-.+.....                                    
T Consensus        76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~------------------------------------  119 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD------------------------------------  119 (472)
T ss_pred             CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccC------------------------------------
Confidence            4569999999999999 567899999999999999865422110                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                  .......+.||...|--++|+|.. ..|++++.|.+|.+||+.+++.+.++. |...|.++.|+.||.
T Consensus       120 ------------ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs  186 (472)
T KOG0303|consen  120 ------------LTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGS  186 (472)
T ss_pred             ------------cccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCc
Confidence                        011223467999999999999964 578999999999999999999988887 999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCccc-EEEEEecccccCCCCCEEEEE---eCCCcEEEEECCCCe-E--EEEe
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW-ITALSWEPFHLNHQCRRFASS---GKDGAIRIWDVILSQ-C--VRVL  335 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~l~s~---~~dg~v~iwd~~~~~-~--~~~~  335 (573)
                      +|++.+.|..|+|||.++++.+... .+|.+. -...-|.     .++..+.||   -.+..+-+||...-. +  ...+
T Consensus       187 ~l~TtckDKkvRv~dpr~~~~v~e~-~~heG~k~~Raifl-----~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~el  260 (472)
T KOG0303|consen  187 LLCTTCKDKKVRVIDPRRGTVVSEG-VAHEGAKPARAIFL-----ASGKIFTTGFSRMSERQIALWDPNNLEEPIALQEL  260 (472)
T ss_pred             eeeeecccceeEEEcCCCCcEeeec-ccccCCCcceeEEe-----ccCceeeeccccccccceeccCcccccCcceeEEe
Confidence            9999999999999999999876543 556542 1112221     234433333   246788899875432 2  1222


Q ss_pred             cCCCccEEEEEECCC-cEEEEEe-CCCeEEEEeCCCCe
Q psy2671         336 TSHTRSVTCIRWGGS-GLIYSAS-QDRTIKVWRASDGV  371 (573)
Q Consensus       336 ~~h~~~v~~~~~~~~-~~l~s~s-~d~~i~vw~~~~~~  371 (573)
                      .. ...|.---|.++ ++++.++ .|+.||.|.+....
T Consensus       261 Dt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  261 DT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             cc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence            22 234444445544 4555554 69999999987654

>KOG0649|consensus

Probab=99.78  E-value=1.3e-16  Score=135.82  Aligned_cols=278  Identities=17%  Similarity=0.299  Sum_probs=189.4

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCC----------CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTT----------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~----------~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                      .|.+-+++|.+++|+.|..+|+|.+..+++          ..++...++|.++|+.++|.  ..+|++|+. |.|+-|.-
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd-G~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD-GLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC-ceEEEeee
Confidence            466778999999999999999999998764          23456668999999999998  346777665 99998875


Q ss_pred             CCCce------ecc-cccCCc-----ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         279 STGKQ------IGQ-PMRGHK-----QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       279 ~~~~~------~~~-~~~~h~-----~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      +.-..      +.+ ...-|.     ..|.++-..|     ..+.++.++.|+.+.-||+++++..+.+.+|+.-+.++.
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP-----~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv  163 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDP-----SENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVV  163 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEecc-----CCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeee
Confidence            43211      111 011122     2345554444     345577778999999999999999999999999999999


Q ss_pred             E-CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 W-GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~-~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      - +.++.+++|+.||++|+||.++++.++.++...+                                            
T Consensus       164 ~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~--------------------------------------------  199 (325)
T KOG0649|consen  164 GRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKN--------------------------------------------  199 (325)
T ss_pred             ecccCcceeecCCCccEEEEeccccceeEEeccccC--------------------------------------------
Confidence            8 6677999999999999999999887665542111                                            


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc-cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH-QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA  504 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h-~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~  504 (573)
                                              ...   +..| ...|-+++.+.|  .+++|+ ...+.+|.+++.+...++.-. ..
T Consensus       200 ------------------------~~~---lRp~~g~wigala~~ed--WlvCGg-Gp~lslwhLrsse~t~vfpip-a~  248 (325)
T KOG0649|consen  200 ------------------------PNL---LRPDWGKWIGALAVNED--WLVCGG-GPKLSLWHLRSSESTCVFPIP-AR  248 (325)
T ss_pred             ------------------------hhh---cCcccCceeEEEeccCc--eEEecC-CCceeEEeccCCCceEEEecc-cc
Confidence                                    000   1111 234666766544  677665 567899999887766655421 33


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCC-CEEEEeeCCCcEEEcc
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~-~~l~s~~~d~~i~iw~  572 (573)
                      +..+.|-.|  .+++++..+.|.-|.+.. .+....+...-..++..|+-.. ++|-.+|..+.+.+++
T Consensus       249 v~~v~F~~d--~vl~~G~g~~v~~~~l~G-vl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~  314 (325)
T KOG0649|consen  249 VHLVDFVDD--CVLIGGEGNHVQSYTLNG-VLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHILK  314 (325)
T ss_pred             eeEeeeecc--eEEEeccccceeeeeecc-EEEEeccCCccceeeecccCCceEEEEecccceeeeeee
Confidence            556666543  677777777888887743 3333333333456666665443 4555667677777664

>KOG1517|consensus

Probab=99.78  E-value=7.1e-17  Score=163.46  Aligned_cols=299  Identities=23%  Similarity=0.361  Sum_probs=195.0

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      +...+-..+.|+|-.+.+++++.-..|+|||.+.++.+-....                                     
T Consensus      1062 ~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n------------------------------------- 1104 (1387)
T KOG1517|consen 1062 GNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDN------------------------------------- 1104 (1387)
T ss_pred             cCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccC-------------------------------------
Confidence            4444667889999999999998888999999998876422110                                     


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECC-CCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVT-TQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~-~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                   ..  .-...|+.+.+-.  |...+.+|+.||.||||+-- ++..      ...-|  -+|++=...+
T Consensus      1105 -------------~~--~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~------~~eLV--Taw~~Ls~~~ 1161 (1387)
T KOG1517|consen 1105 -------------GA--FPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWK------KPELV--TAWSSLSDQL 1161 (1387)
T ss_pred             -------------CC--CCCCccceeeeecccchhheeeeccCceEEEecccccccC------CceeE--EeeccccccC
Confidence                         00  1123577777643  55689999999999999732 2100      00011  1344322223


Q ss_pred             EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-CCccEE
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-HTRSVT  343 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~  343 (573)
                      -.+..-|.+.-|.-                             ....|+++|.-..|||||......+..+.. -...|+
T Consensus      1162 ~~~r~~~~v~dWqQ-----------------------------~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vT 1212 (1387)
T KOG1517|consen 1162 PGARGTGLVVDWQQ-----------------------------QSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVT 1212 (1387)
T ss_pred             ccCCCCCeeeehhh-----------------------------hCCeEEecCCeeEEEEEecccceeEeecccCCCccce
Confidence            22222333333322                             123455566678899999887776666543 334455


Q ss_pred             EEEEC--CCcEEEEEeCCCeEEEEeCCCCe---eeEeccCCcce--eeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         344 CIRWG--GSGLIYSASQDRTIKVWRASDGV---MCRTLEGHAHW--VNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       344 ~~~~~--~~~~l~s~s~d~~i~vw~~~~~~---~~~~~~~~~~~--v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      ++.-.  ..+.++.|-.||+|++||.+...   ++...+.|..+  |..+.+.                           
T Consensus      1213 aLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq--------------------------- 1265 (1387)
T KOG1517|consen 1213 ALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQ--------------------------- 1265 (1387)
T ss_pred             eecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEee---------------------------
Confidence            55432  23588999999999999987542   34455666554  4333332                           


Q ss_pred             hhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCCC-ccceeeecccc--c-cEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy2671         417 HALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEKE-KKSLARMTGHQ--Q-LINCVEFSPDGRIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       417 ~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~~-~~~~~~~~~h~--~-~v~~v~~sp~g~~las~s~dg~i~lwd~~~  491 (573)
                                +.|- .|++|+.+|.|++||++.. ......+..|-  + ..+++..+++...+|+|+. +.|+||+.. 
T Consensus      1266 ----------~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~- 1333 (1387)
T KOG1517|consen 1266 ----------RQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLS- 1333 (1387)
T ss_pred             ----------cCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecC-
Confidence                      1122 5999999999999999873 32223333332  2 4899999999999999998 999999975 


Q ss_pred             CeEEEeecCC-------cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         492 GKFITTLRGH-------VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       492 ~~~~~~~~~h-------~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      |+.+..++-+       .+.+.|++|+|.--++|+|+.|++|.||.....
T Consensus      1334 G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1334 GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence            4444433322       345789999999999999999999999976543

>KOG1517|consensus

Probab=99.78  E-value=6.9e-17  Score=163.56  Aligned_cols=295  Identities=18%  Similarity=0.305  Sum_probs=200.7

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCC---CCcEEEEEEcC--CCCeEEEEeeCCeEEEEEC
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH---KHWVLCIAWSP--DSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h---~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd~  278 (573)
                      .|...+-..+.|+|-...++++...-.|+|||++.++.+..+..+   ...|+.+.+-.  |...+++|+.||.|++|+-
T Consensus      1061 ~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~ 1140 (1387)
T KOG1517|consen 1061 TGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKD 1140 (1387)
T ss_pred             hcCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecc
Confidence            344556678899999999999988889999999988876555433   24588888743  5568899999999999974


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC-CCcEEEEEe
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSAS  357 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s  357 (573)
                      -....      +.                  ..++|+...        .++    .+.+..+.=.-+.|. ..|.+++++
T Consensus      1141 y~~~~------~~------------------~eLVTaw~~--------Ls~----~~~~~r~~~~v~dWqQ~~G~Ll~tG 1184 (1387)
T KOG1517|consen 1141 YADKW------KK------------------PELVTAWSS--------LSD----QLPGARGTGLVVDWQQQSGHLLVTG 1184 (1387)
T ss_pred             ccccc------CC------------------ceeEEeecc--------ccc----cCccCCCCCeeeehhhhCCeEEecC
Confidence            22110      00                  123332110        000    000000001223453 346788888


Q ss_pred             CCCeEEEEeCCCCeeeEeccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      .-+.|+|||......+..+.-. ..-++++..                                    ....|+.+++|-
T Consensus      1185 d~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~------------------------------------~~~~gn~i~AGf 1228 (1387)
T KOG1517|consen 1185 DVRSIRIWDAHKEQVVADIPYGSSTLVTALSA------------------------------------DLVHGNIIAAGF 1228 (1387)
T ss_pred             CeeEEEEEecccceeEeecccCCCccceeecc------------------------------------cccCCceEEEee
Confidence            8999999999876655443321 111221111                                    114588999999


Q ss_pred             CCCeEEEEcCCCCc--cceeeecccccc--EEEEEECCCCCE-EEEeeCCCcEEEEeCCCCeEE--EeecCCc--c-eEE
Q psy2671         437 DDFTLFLWNPEKEK--KSLARMTGHQQL--INCVEFSPDGRI-IASASFDKSIKLWDGRIGKFI--TTLRGHV--Q-AVY  506 (573)
Q Consensus       437 ~dg~i~lwd~~~~~--~~~~~~~~h~~~--v~~v~~sp~g~~-las~s~dg~i~lwd~~~~~~~--~~~~~h~--~-~v~  506 (573)
                      .||.+++||.+...  ..+...+.|+..  |..+.+.+.|-. |++|+.||.|++||++.....  .+...|.  + .++
T Consensus      1229 aDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lT 1308 (1387)
T KOG1517|consen 1229 ADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALT 1308 (1387)
T ss_pred             cCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccce
Confidence            99999999976543  245566778877  999999987765 999999999999999974222  2233333  2 489


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCccccccccc-------CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-------GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~-------~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++..+++...+|+|+. +.|+||++....+ ..++       .-.+.+.+++|+|-.-.||.|+.|.+|.||.
T Consensus      1309 al~VH~hapiiAsGs~-q~ikIy~~~G~~l-~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1309 ALTVHEHAPIIASGSA-QLIKIYSLSGEQL-NIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYS 1379 (1387)
T ss_pred             eeeeccCCCeeeecCc-ceEEEEecChhhh-cccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEee
Confidence            9999999999999998 9999999965432 1111       1234678999999988899999999999985

>KOG1334|consensus

Probab=99.77  E-value=8.3e-18  Score=156.62  Aligned_cols=290  Identities=21%  Similarity=0.327  Sum_probs=219.0

Q ss_pred             EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      ..+.+|.+.|..|.|+..|..|++||.|..|.+||...++.......||...|....|.|+.   ..+.+++++.||.+|
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s---~d~ti~~~s~dgqvr  212 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFS---GDRTIVTSSRDGQVR  212 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCC---CCcCceeccccCcee
Confidence            45788999999999999999999999999999999999888777788999988888888864   446799999999999


Q ss_pred             EEECCCCeE---EEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEecc---CCcc---eeeEEEeccC
Q psy2671         323 IWDVILSQC---VRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLE---GHAH---WVNTLALSTD  391 (573)
Q Consensus       323 iwd~~~~~~---~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~---~~~~---~v~~~~~s~~  391 (573)
                      +=.+.....   .+.+..|.++|..++..+..  .+++++.|+.+.-+|++.+.....+.   .+..   ..+.++    
T Consensus       213 ~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia----  288 (559)
T KOG1334|consen  213 VSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIA----  288 (559)
T ss_pred             eeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEe----
Confidence            877654322   34567799999999886654  69999999999999988764432211   1110   011111    


Q ss_pred             ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-CcEEEEEeCCCeEEEEcCCCCccc-----eeeec------cc
Q psy2671         392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKS-----LARMT------GH  459 (573)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~lwd~~~~~~~-----~~~~~------~h  459 (573)
                                                       ..|. -..+++|+.|-.+++||.+.-...     +..+.      ..
T Consensus       289 ---------------------------------~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~  335 (559)
T KOG1334|consen  289 ---------------------------------VDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDD  335 (559)
T ss_pred             ---------------------------------cCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccC
Confidence                                             1132 347899999999999987642211     11111      12


Q ss_pred             cccEEEEEECCCCCEEEEeeCCCcEEEEeCCC--C----------eEEE-eecCCcc--eEEEEE-ECCCCCEEEEEeCC
Q psy2671         460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRI--G----------KFIT-TLRGHVQ--AVYMVA-WSSDSRLLVSGSAD  523 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~--~----------~~~~-~~~~h~~--~v~~v~-~s~dg~~las~s~D  523 (573)
                      .-.|+|++|+.++.-|.++-.|-.|+++....  |          ..+. .++||..  .|-.+- |-|...|+++||.-
T Consensus       336 ~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDC  415 (559)
T KOG1334|consen  336 PVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDC  415 (559)
T ss_pred             cccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCcc
Confidence            23589999998777666677788899995332  2          1222 3778854  355554 56889999999999


Q ss_pred             CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       524 ~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |.|.||+-.++++++.+.+-..-|+|+.=+|--..|||+|-|.-||||.
T Consensus       416 GhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  416 GHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWT  464 (559)
T ss_pred             ceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeec
Confidence            9999999999999999998877999999999989999999999999995

>KOG0771|consensus

Probab=99.77  E-value=1.6e-17  Score=152.54  Aligned_cols=206  Identities=22%  Similarity=0.340  Sum_probs=142.2

Q ss_pred             EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccC
Q psy2671         211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG  290 (573)
Q Consensus       211 ~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~  290 (573)
                      .+++|+++|..|++|+.||++|||++..-..+.....|.+.|.+++|||||+.|++-+.| ..+||++++|..+......
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            789999999999999999999999988877777778899999999999999999999999 9999999998554321111


Q ss_pred             Cccc-EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC
Q psy2671         291 HKQW-ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD  369 (573)
Q Consensus       291 h~~~-v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~  369 (573)
                      .+.+ ...+.|..           -... -++++...                             ...-+.|+.|+   
T Consensus       227 ~k~~~~~~cRF~~-----------d~~~-~~l~laa~-----------------------------~~~~~~v~~~~---  262 (398)
T KOG0771|consen  227 SKDEMFSSCRFSV-----------DNAQ-ETLRLAAS-----------------------------QFPGGGVRLCD---  262 (398)
T ss_pred             ccchhhhhceecc-----------cCCC-ceEEEEEe-----------------------------cCCCCceeEEE---
Confidence            1111 11111100           0000 01111110                             00111122221   


Q ss_pred             CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC
Q psy2671         370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE  449 (573)
Q Consensus       370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~  449 (573)
                                                                                             +.+|+-.+-
T Consensus       263 -----------------------------------------------------------------------~~~w~~~~~  271 (398)
T KOG0771|consen  263 -----------------------------------------------------------------------ISLWSGSNF  271 (398)
T ss_pred             -----------------------------------------------------------------------eeeeccccc
Confidence                                                                                   112221100


Q ss_pred             ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee-cCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671         450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGSADSTLKV  528 (573)
Q Consensus       450 ~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~dg~~las~s~D~~v~v  528 (573)
                      . .........+.|++++.|++|+++|.|+.||.|-|++..+.+.++-. +.|...|+.+.|+||.+++++-+.|.+..|
T Consensus       272 l-~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v  350 (398)
T KOG0771|consen  272 L-RLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAV  350 (398)
T ss_pred             c-chhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeE
Confidence            0 01111122356999999999999999999999999999888777655 579999999999999999999999999988


Q ss_pred             EeCCc
Q psy2671         529 WNMKT  533 (573)
Q Consensus       529 wd~~~  533 (573)
                      ..+.-
T Consensus       351 ~~l~v  355 (398)
T KOG0771|consen  351 TKLAV  355 (398)
T ss_pred             EEEee
Confidence            87654

>KOG1524|consensus

Probab=99.77  E-value=3.7e-17  Score=153.87  Aligned_cols=265  Identities=17%  Similarity=0.278  Sum_probs=177.8

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccC----CCCCEEEEEeCCCcEE
Q psy2671         247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN----HQCRRFASSGKDGAIR  322 (573)
Q Consensus       247 ~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~----~~~~~l~s~~~dg~v~  322 (573)
                      .|...|.|+.|+.....+.+++.+..++-||+.+.......+.  ...+....+ ++..+    ...+.|+.++.||.+.
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p--~df~pt~~h-~~~rs~~~g~~~d~~~i~s~DGkf~   88 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLP--DDFVPTDMH-LGGRSSGGGKGSDTLLICSNDGRFV   88 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCC--cccCCcccc-ccccccCCCCCcceEEEEcCCceEE
Confidence            4666678999988776555544444445555543221100000  000000000 11111    1235788899999998


Q ss_pred             EEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         323 IWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       323 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      +.+- .++..+.+..|.+.+.|-.|+++| -+++++.||.|++|.. +|.+..++-.....|+++++.++..        
T Consensus        89 il~k-~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~--------  158 (737)
T KOG1524|consen   89 ILNK-SARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSN--------  158 (737)
T ss_pred             Eecc-cchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCC--------
Confidence            8763 455666788999999999999998 5999999999999984 3444444445556677777765532        


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                                                  +.+.+.+  +.+.+=.+.- .....+...|.+.|.++.|+|...+|++|+.|
T Consensus       159 ----------------------------~vl~c~g--~h~~IKpL~~-n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED  207 (737)
T KOG1524|consen  159 ----------------------------SIVFCQG--GHISIKPLAA-NSKIIRWRAHDGLVLSLSWSTQSNIIASGGED  207 (737)
T ss_pred             ----------------------------ceEEecC--CeEEEeeccc-ccceeEEeccCcEEEEeecCccccceeecCCc
Confidence                                        1222222  1222222211 12244567899999999999999999999999


Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      -..++||.. |+.+..-..|..+|++++|.|| +.++.+|. +++|+           -....+.|..++||+||.+++.
T Consensus       208 ~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~-----------~~p~~GSifnlsWS~DGTQ~a~  273 (737)
T KOG1524|consen  208 FRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTARF-----------SSPRVGSIFNLSWSADGTQATC  273 (737)
T ss_pred             eeEEeeccc-CcccccCChhccceeeeeeccc-cceeeeee-eeeee-----------cCCCccceEEEEEcCCCceeec
Confidence            999999965 6777777889999999999999 67777764 34552           1234578999999999999999


Q ss_pred             eeCCCcEE
Q psy2671         562 GGKDKVLR  569 (573)
Q Consensus       562 ~~~d~~i~  569 (573)
                      |...|.+.
T Consensus       274 gt~~G~v~  281 (737)
T KOG1524|consen  274 GTSTGQLI  281 (737)
T ss_pred             cccCceEE
Confidence            88888654

>KOG1587|consensus

Probab=99.77  E-value=3e-16  Score=156.67  Aligned_cols=264  Identities=20%  Similarity=0.370  Sum_probs=178.4

Q ss_pred             CCeEEEEECCCCe-eeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCcee-----cccccCCcccEEEEEe
Q psy2671         228 DTTVRFWDVTTQT-PLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQI-----GQPMRGHKQWITALSW  300 (573)
Q Consensus       228 d~~i~iwd~~~~~-~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~~-----~~~~~~h~~~v~~~~~  300 (573)
                      ++.+.||+++... +-..+ .-...|+|+.|+| +...++.|+.+|.|.+||++.+...     ......|...+.++.|
T Consensus       221 ~~~~~vW~~~~p~~Pe~~~-~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  221 DGVLLVWSLKNPNTPELVL-ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             CceEEEEecCCCCCceEEE-ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            3579999998763 32232 2356799999999 4567788899999999999876542     1223468899999999


Q ss_pred             cccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEEec----CC-------CccEEEEEECCCcEEEEEeCCCeEEEEeCC
Q psy2671         301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVLT----SH-------TRSVTCIRWGGSGLIYSASQDRTIKVWRAS  368 (573)
Q Consensus       301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~----~h-------~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~  368 (573)
                      .....+   ..|++++.||.|..|++..-.. ...+.    .|       ...+++++|.+.                  
T Consensus       300 ~~~~~~---~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~------------------  358 (555)
T KOG1587|consen  300 LQNEHN---TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPT------------------  358 (555)
T ss_pred             eccCCC---CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccC------------------
Confidence            874322   4589999999999998653221 11000    00       112333444321                  


Q ss_pred             CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE---Ec
Q psy2671         369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL---WN  445 (573)
Q Consensus       369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l---wd  445 (573)
                                                                                 +...++.|+++|.|.-   ++
T Consensus       359 -----------------------------------------------------------~p~~FiVGTe~G~v~~~~r~g  379 (555)
T KOG1587|consen  359 -----------------------------------------------------------DPNHFIVGTEEGKVYKGCRKG  379 (555)
T ss_pred             -----------------------------------------------------------CCceEEEEcCCcEEEEEeccC
Confidence                                                                       1123444444444433   11


Q ss_pred             CCCCc----cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeEEEeecCCcceEEEEEECCCC-CEEEE
Q psy2671         446 PEKEK----KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYMVAWSSDS-RLLVS  519 (573)
Q Consensus       446 ~~~~~----~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~~~~~~~h~~~v~~v~~s~dg-~~las  519 (573)
                      .+...    +.......|...|+++.++|=+..+...+.|.+++||.-. ....+..+..+...|++++|||-- ..+|+
T Consensus       380 ~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~  459 (555)
T KOG1587|consen  380 YTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFAT  459 (555)
T ss_pred             CcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEE
Confidence            11111    1223445678889999999966554444449999999876 556677777777889999999965 46888


Q ss_pred             EeCCCcEEEEeCCccc--ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         520 GSADSTLKVWNMKTKK--IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~~--~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +..||.+.+||+....  .....+-+....+.+.|++.|+.|+.|...|++.+|+
T Consensus       460 ~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~  514 (555)
T KOG1587|consen  460 VDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILK  514 (555)
T ss_pred             EcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEE
Confidence            8899999999996543  3334444456677889999999999999999999985

>KOG0303|consensus

Probab=99.74  E-value=7.5e-17  Score=146.42  Aligned_cols=165  Identities=23%  Similarity=0.485  Sum_probs=136.6

Q ss_pred             EEecCCCccEEEEEECC--CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         333 RVLTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~~--~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      ..+.+|+.+|..++|.+  +..|++||.|.+|.+|.+..+.+.+.+                                  
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~l----------------------------------  120 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDL----------------------------------  120 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCc----------------------------------
Confidence            34678999999999986  457999999999999988655332211                                  


Q ss_pred             chhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeC
Q psy2671         411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDG  489 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~  489 (573)
                                                             ..+...+.||+..|-.|+|+|.. +.|++++.|.+|.+||+
T Consensus       121 ---------------------------------------tepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv  161 (472)
T KOG0303|consen  121 ---------------------------------------TEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNV  161 (472)
T ss_pred             ---------------------------------------ccceEEEeecceeEEEEeecccchhhHhhccCCceEEEEec
Confidence                                                   12355678999999999999954 57889999999999999


Q ss_pred             CCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC-CEEEEEEccCCCEEEEee----C
Q psy2671         490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD-EVYAVDWAPDGEKVASGG----K  564 (573)
Q Consensus       490 ~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~-~v~~~~~s~d~~~l~s~~----~  564 (573)
                      .+|+.+.++. |...|+++.|+.||.+|++++.|..|||||.++++.+..-.+|.+ +-..+.|-.+|+ |+|.|    .
T Consensus       162 ~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~s  239 (472)
T KOG0303|consen  162 GTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMS  239 (472)
T ss_pred             cCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eeeecccccc
Confidence            9999998888 999999999999999999999999999999999999888788865 345567888988 55554    4


Q ss_pred             CCcEEEcc
Q psy2671         565 DKVLRLWQ  572 (573)
Q Consensus       565 d~~i~iw~  572 (573)
                      ++.+-||+
T Consensus       240 eRq~aLwd  247 (472)
T KOG0303|consen  240 ERQIALWD  247 (472)
T ss_pred             ccceeccC
Confidence            56788886

>KOG1963|consensus

Probab=99.73  E-value=5.5e-15  Score=147.92  Aligned_cols=321  Identities=18%  Similarity=0.248  Sum_probs=213.5

Q ss_pred             EEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC---CeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS---KQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       213 ~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg---~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      -.||+|+++++.... ..|.||...++.++..+.+|..++.++.+.|..   .++++++.||.|++||-..+..+.. +.
T Consensus        22 avfSnD~k~l~~~~~-~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt-~~   99 (792)
T KOG1963|consen   22 AVFSNDAKFLFLCTG-NFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKT-FD   99 (792)
T ss_pred             cccccCCcEEEEeeC-CEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEE-Ee
Confidence            459999999887764 589999999999999999999999999998754   3678999999999999988876532 11


Q ss_pred             CCcccEEEEEecccccCCCCCEEEE---------EeC--CCcEEEEECCCC--eEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFAS---------SGK--DGAIRIWDVILS--QCVRVLTSHTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s---------~~~--dg~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~l~s~  356 (573)
                      . ...+.++.+.|.+....-...++         .+.  -+.++-+.+.+.  .....+..|.. -.++..++.+.+...
T Consensus       100 ~-~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~-~~~I~~~~~ge~~~i  177 (792)
T KOG1963|consen  100 N-NLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQE-PKSIVDNNSGEFKGI  177 (792)
T ss_pred             c-CCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcC-CccEEEcCCceEEEE
Confidence            1 12233343333222211111111         111  111111111110  01111222322 355666777777777


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh-hhheeeeCCCCcEEEEE
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA-LAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg  435 (573)
                      -.+..+.+|......  +...++..                                ...|. .....+.+|.+.++|+|
T Consensus       178 ~~~~~~~~~~v~~~~--~~~~~~~~--------------------------------~~~Htf~~t~~~~spn~~~~Aa~  223 (792)
T KOG1963|consen  178 VHMCKIHIYFVPKHT--KHTSSRDI--------------------------------TVHHTFNITCVALSPNERYLAAG  223 (792)
T ss_pred             EEeeeEEEEEecccc--eeeccchh--------------------------------hhhhcccceeEEeccccceEEEe
Confidence            777778888766543  11111000                                00000 01223456889999999


Q ss_pred             eCCCeEEEEcCCC---CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECC
Q psy2671         436 SDDFTLFLWNPEK---EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS  512 (573)
Q Consensus       436 ~~dg~i~lwd~~~---~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~  512 (573)
                      ..||.|.+|.--.   .......+.=|...|++++|+++|.+|.+||..|.+-+|...+++ .+-|+.-.++|..+.+||
T Consensus       224 d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~  302 (792)
T KOG1963|consen  224 DSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSP  302 (792)
T ss_pred             ccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcC
Confidence            9999999996322   223345566788899999999999999999999999999998887 344454567899999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCcccccccccC-----------cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPG-----------HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       513 dg~~las~s~D~~v~vwd~~~~~~~~~l~~-----------h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |+.+.+....|+.|.+-...+-+....+.|           .++-.+.+.+.|..+.++-.+.-+.|++|+
T Consensus       303 ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~yd  373 (792)
T KOG1963|consen  303 DSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYD  373 (792)
T ss_pred             CCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEe
Confidence            999999999999999988765443332221           234567788899878888899999999886

>KOG0290|consensus

Probab=99.73  E-value=1.4e-15  Score=132.86  Aligned_cols=276  Identities=20%  Similarity=0.315  Sum_probs=193.6

Q ss_pred             cEEEEEEc--CC-CCeEEEEeeC----CeEEEE--ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         251 WVLCIAWS--PD-SKQLVSGCKN----GVIHAW--DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       251 ~V~~v~~s--~d-g~~l~sgs~d----g~i~vw--d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                      .+.+++||  |+ +.+||.|+.-    +.|.+-  |-+++..+......|.-+++.+.|.|......-++|||++  -.+
T Consensus        46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~L  123 (364)
T KOG0290|consen   46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFL  123 (364)
T ss_pred             ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeE
Confidence            46778887  23 3468888753    344444  3444555444445788889999999976444445677654  479


Q ss_pred             EEEECCCCe----EEEEe-----cCCCccEEEEEECC--CcEEEEEeCCCeEEEEeCCCCee---eEeccCCcceeeEEE
Q psy2671         322 RIWDVILSQ----CVRVL-----TSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVM---CRTLEGHAHWVNTLA  387 (573)
Q Consensus       322 ~iwd~~~~~----~~~~~-----~~h~~~v~~~~~~~--~~~l~s~s~d~~i~vw~~~~~~~---~~~~~~~~~~v~~~~  387 (573)
                      |+|.+...+    +...+     ..+..++++..|+.  ...|.+.|-|.+..+||+.+|..   ...+-.|..+|..++
T Consensus       124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIa  203 (364)
T KOG0290|consen  124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIA  203 (364)
T ss_pred             EEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEE
Confidence            999886421    11112     23567889999974  45899999999999999998733   445678888898888


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc--ccccEEE
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINC  465 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~  465 (573)
                      |...                                    ....+|+.+.||.+|+||++..........+  ...+...
T Consensus       204 f~~~------------------------------------s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlR  247 (364)
T KOG0290|consen  204 FLKG------------------------------------SRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLR  247 (364)
T ss_pred             eccC------------------------------------ccceEEEecCCCcEEEEEecccccceEEecCCCCCCccee
Confidence            8642                                    1357999999999999999875433222222  1345677


Q ss_pred             EEECC-CCCEEEEeeCC-CcEEEEeCCCC-eEEEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCCcccc-----
Q psy2671         466 VEFSP-DGRIIASASFD-KSIKLWDGRIG-KFITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKTKKI-----  536 (573)
Q Consensus       466 v~~sp-~g~~las~s~d-g~i~lwd~~~~-~~~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~~~~-----  536 (573)
                      +++++ |-+++|+-..| ..|.|.|++.. ..+..|++|...|+.++|.|.. ..|+|++.|..+.+||+..--.     
T Consensus       248 LswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~d  327 (364)
T KOG0290|consen  248 LSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGED  327 (364)
T ss_pred             eccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCC
Confidence            88877 44677765444 56899999874 5678899999999999999964 5899999999999999965321     


Q ss_pred             -cccccCcCCCEEEEEEcc-CCCEEEEeeCC
Q psy2671         537 -EQDLPGHGDEVYAVDWAP-DGEKVASGGKD  565 (573)
Q Consensus       537 -~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d  565 (573)
                       +..+. -.++|+.+.|++ .+.+++.+...
T Consensus       328 Pilay~-a~~EVNqi~Ws~~~~Dwiai~~~k  357 (364)
T KOG0290|consen  328 PILAYT-AGGEVNQIQWSSSQPDWIAICFGK  357 (364)
T ss_pred             chhhhh-ccceeeeeeecccCCCEEEEEecC
Confidence             11122 346899999995 56788877644

>KOG1587|consensus

Probab=99.73  E-value=8.4e-16  Score=153.54  Aligned_cols=250  Identities=19%  Similarity=0.306  Sum_probs=172.1

Q ss_pred             cccEEEEEEcCC-CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         110 AEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       110 ~~~V~~l~~s~~-~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      ...|.|++|+|. ..+||.|.++|+|-+||+..+.-...                                         
T Consensus       242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~-----------------------------------------  280 (555)
T KOG1587|consen  242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPP-----------------------------------------  280 (555)
T ss_pred             CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCC-----------------------------------------
Confidence            567999999996 56788889999999999976532100                                         


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCC--CeEEEEeCCCeEEEEECCCCee-e--EEe--c-------CCCCcEEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNG--RSLASGSGDTTVRFWDVTTQTP-L--FKC--E-------GHKHWVLC  254 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g--~~las~s~d~~i~iwd~~~~~~-~--~~~--~-------~h~~~V~~  254 (573)
                              .........|.++++.+.|-.+-  .-++++|.||.|..|+++--.. .  ...  .       .-...+++
T Consensus       281 --------s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~  352 (555)
T KOG1587|consen  281 --------SGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATS  352 (555)
T ss_pred             --------cccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceee
Confidence                    00011234689999999997654  4499999999999998764221 0  000  1       11235889


Q ss_pred             EEEcC-CCCeEEEEeeCCeEEEEECC---CCc----eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         255 IAWSP-DSKQLVSGCKNGVIHAWDSS---TGK----QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       255 v~~s~-dg~~l~sgs~dg~i~vwd~~---~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      ++|.+ +-..++.|+.+|.|..-+..   .+.    ........|-+.|.++.++||+.    +.|++++ |-++|||..
T Consensus       353 ~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~----k~fls~g-DW~vriWs~  427 (555)
T KOG1587|consen  353 LKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYP----KNFLSVG-DWTVRIWSE  427 (555)
T ss_pred             EeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCcc----ceeeeec-cceeEeccc
Confidence            99987 44578899999998773322   222    01113446778999999999864    3566666 999999998


Q ss_pred             C-CCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671         327 I-LSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG  403 (573)
Q Consensus       327 ~-~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~  403 (573)
                      . ...++..+..+...+++++|++..  .++++..||.|.+||+....                                
T Consensus       428 ~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~--------------------------------  475 (555)
T KOG1587|consen  428 DVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD--------------------------------  475 (555)
T ss_pred             cCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc--------------------------------
Confidence            7 556666666777779999998753  67777777777777764211                                


Q ss_pred             eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc
Q psy2671         404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS  483 (573)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~  483 (573)
                                                                    ..+.....-+....+.+.+++.|+.|++|...|+
T Consensus       476 ----------------------------------------------~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~  509 (555)
T KOG1587|consen  476 ----------------------------------------------EEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGT  509 (555)
T ss_pred             ----------------------------------------------cCCcccccccccccceeecCCCCcEEEEecCCCc
Confidence                                                          0111111112344677889999999999999999


Q ss_pred             EEEEeCCC
Q psy2671         484 IKLWDGRI  491 (573)
Q Consensus       484 i~lwd~~~  491 (573)
                      +++|++..
T Consensus       510 ~~~~~l~~  517 (555)
T KOG1587|consen  510 THILKLSE  517 (555)
T ss_pred             EEEEEcCc
Confidence            99999753

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.72  E-value=7.4e-15  Score=143.60  Aligned_cols=263  Identities=13%  Similarity=0.176  Sum_probs=153.3

Q ss_pred             EEEeCCCeEEEEECCC-Ce--eeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECC-CCcee-cccccCCcccEE
Q psy2671         223 ASGSGDTTVRFWDVTT-QT--PLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSS-TGKQI-GQPMRGHKQWIT  296 (573)
Q Consensus       223 as~s~d~~i~iwd~~~-~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~-~~~~~-~~~~~~h~~~v~  296 (573)
                      ++...|+.|.+||+.+ ++  .+..+. +......++++|++++|++++ .++.|.+|++. .++.. .... .......
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p~   83 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSPT   83 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCce
Confidence            4446789999999964 33  333333 334567889999999987765 47889999986 33321 1111 1112234


Q ss_pred             EEEecccccCCCCCEEEEEe-CCCcEEEEECCCCe----EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCe
Q psy2671         297 ALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV  371 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~  371 (573)
                      .+.+.|     +++++.+++ .++.|.+|++....    .+..+. +.....+++++++                     
T Consensus        84 ~i~~~~-----~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~---------------------  136 (330)
T PRK11028         84 HISTDH-----QGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPD---------------------  136 (330)
T ss_pred             EEEECC-----CCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCC---------------------
Confidence            555544     566666554 47788888775321    111111 1112233334433                     


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCCCCc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~~~~  450 (573)
                                                                               ++++ ++...++.|.+||+.+..
T Consensus       137 ---------------------------------------------------------g~~l~v~~~~~~~v~v~d~~~~g  159 (330)
T PRK11028        137 ---------------------------------------------------------NRTLWVPCLKEDRIRLFTLSDDG  159 (330)
T ss_pred             ---------------------------------------------------------CCEEEEeeCCCCEEEEEEECCCC
Confidence                                                                     3333 222333455555543311


Q ss_pred             cce------eeeccccccEEEEEECCCCCEEEEeeC-CCcEEEEeCCC--C--eEEEeecCC------cceEEEEEECCC
Q psy2671         451 KSL------ARMTGHQQLINCVEFSPDGRIIASASF-DKSIKLWDGRI--G--KFITTLRGH------VQAVYMVAWSSD  513 (573)
Q Consensus       451 ~~~------~~~~~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~~--~--~~~~~~~~h------~~~v~~v~~s~d  513 (573)
                      ...      .... .......++|+|+|++++++.. ++.|.+||...  +  +.+..+..+      ......+.++||
T Consensus       160 ~l~~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pd  238 (330)
T PRK11028        160 HLVAQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPD  238 (330)
T ss_pred             cccccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCC
Confidence            110      0010 1123467899999999988765 89999999863  3  233333221      122346889999


Q ss_pred             CCEEEEEe-CCCcEEEEeCCcccccccccCcC---CCEEEEEEccCCCEEEEeeC-CCcEEEcc
Q psy2671         514 SRLLVSGS-ADSTLKVWNMKTKKIEQDLPGHG---DEVYAVDWAPDGEKVASGGK-DKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s-~D~~v~vwd~~~~~~~~~l~~h~---~~v~~~~~s~d~~~l~s~~~-d~~i~iw~  572 (573)
                      |++|+++. .++.|.+|++........+.++.   .....+.|+|||++|+++.. +++|.+|+
T Consensus       239 g~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~  302 (330)
T PRK11028        239 GRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYE  302 (330)
T ss_pred             CCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence            99999885 47899999986433211122221   23457899999999997765 88999985

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.71  E-value=6.7e-16  Score=155.59  Aligned_cols=233  Identities=21%  Similarity=0.282  Sum_probs=153.6

Q ss_pred             CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCcee-cccccCCcccEEEEEeccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPF  303 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~  303 (573)
                      +..|.+||..... ...+..|...+.+.+|||||++|+.++.+   ..|++||+.+++.. .....+|.   ....|.| 
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~wSP-  257 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPAFSP-  257 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---CceeECC-
Confidence            5789999987654 44566788889999999999999987764   37999999887532 12233333   3456655 


Q ss_pred             ccCCCCCEEEEE-eCCCcEEEE--ECCCCeEEEEecCCCccEEEEEECCCcE-EE-EEeCCCeEEEEeCCCCeeeEeccC
Q psy2671         304 HLNHQCRRFASS-GKDGAIRIW--DVILSQCVRVLTSHTRSVTCIRWGGSGL-IY-SASQDRTIKVWRASDGVMCRTLEG  378 (573)
Q Consensus       304 ~~~~~~~~l~s~-~~dg~v~iw--d~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~-s~s~d~~i~vw~~~~~~~~~~~~~  378 (573)
                          +++.|+.+ +.+|.+.||  |+..+. ...+..+...+....|++++. ++ ++..++..++|++.          
T Consensus       258 ----DG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~----------  322 (429)
T PRK01742        258 ----DGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMS----------  322 (429)
T ss_pred             ----CCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEE----------
Confidence                67777765 467776665  544443 333444555556666666652 22 33344555555432          


Q ss_pred             CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       379 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                                                                                           ........+ +
T Consensus       323 ---------------------------------------------------------------------~~~~~~~~l-~  332 (429)
T PRK01742        323 ---------------------------------------------------------------------ASGGGASLV-G  332 (429)
T ss_pred             ---------------------------------------------------------------------CCCCCeEEe-c
Confidence                                                                                 111111111 1


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeC--Ccccc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM--KTKKI  536 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~--~~~~~  536 (573)
                      +..  ....|+|||+.|+.++.++ +.+||..+++.......+  ....++|+|||++|+.++.++.+++|++  .+++.
T Consensus       333 ~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~  407 (429)
T PRK01742        333 GRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRF  407 (429)
T ss_pred             CCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence            222  3467999999998887765 555999888654322222  2346789999999999999999988886  35777


Q ss_pred             cccccCcCCCEEEEEEccC
Q psy2671         537 EQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       537 ~~~l~~h~~~v~~~~~s~d  555 (573)
                      .+.+.+|.+.+...+|||-
T Consensus       408 ~~~l~~~~g~~~~p~wsp~  426 (429)
T PRK01742        408 KARLPGSDGQVKFPAWSPY  426 (429)
T ss_pred             eEEccCCCCCCCCcccCCC
Confidence            8888888888999999984

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.71  E-value=3.7e-14  Score=138.64  Aligned_cols=246  Identities=13%  Similarity=0.200  Sum_probs=149.4

Q ss_pred             CcEEEEEEcCCCCeEEEEe-CCCeEEEEECCC-Cee--eEEecCCCCcEEEEEEcCCCCeEEEEee-CCeEEEEECCCCc
Q psy2671         208 EAVISVKFSPNGRSLASGS-GDTTVRFWDVTT-QTP--LFKCEGHKHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSSTGK  282 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s-~d~~i~iwd~~~-~~~--~~~~~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~~~~  282 (573)
                      +....++++|++++|++++ .++.|.+|++.. ++.  +.... .......++|+|++++|++++. ++.|.+|++++..
T Consensus        35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g  113 (330)
T PRK11028         35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDG  113 (330)
T ss_pred             CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCC
Confidence            3456789999999987664 578999999863 322  22211 2234578999999999988765 7899999986422


Q ss_pred             eecc---cccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEE-----ec-CCCccEEEEEECCCc-
Q psy2671         283 QIGQ---PMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRV-----LT-SHTRSVTCIRWGGSG-  351 (573)
Q Consensus       283 ~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~-----~~-~h~~~v~~~~~~~~~-  351 (573)
                      .+..   ...+ ......+.+.|     +++++ ++...++.|++||+.....+..     .. ........+.|++++ 
T Consensus       114 ~~~~~~~~~~~-~~~~~~~~~~p-----~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~  187 (330)
T PRK11028        114 IPVAPIQIIEG-LEGCHSANIDP-----DNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQ  187 (330)
T ss_pred             CCCCceeeccC-CCcccEeEeCC-----CCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCC
Confidence            1111   1111 12234444444     56666 4556679999999976322210     00 112335678888886 


Q ss_pred             EEEEEeC-CCeEEEEeCCCC--eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         352 LIYSASQ-DRTIKVWRASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       352 ~l~s~s~-d~~i~vw~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      .++++.. +++|.+|++..+  ... ..       ..+...                                     | 
T Consensus       188 ~lyv~~~~~~~v~v~~~~~~~~~~~-~~-------~~~~~~-------------------------------------p-  221 (330)
T PRK11028        188 YAYCVNELNSSVDVWQLKDPHGEIE-CV-------QTLDMM-------------------------------------P-  221 (330)
T ss_pred             EEEEEecCCCEEEEEEEeCCCCCEE-EE-------EEEecC-------------------------------------C-
Confidence            5666655 899999987632  110 00       000000                                     0 


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEeecCCc---ce
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITTLRGHV---QA  504 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~~~~h~---~~  504 (573)
                                        ..       . .+......+.|+|+|++++++. .++.|.+|+........++.++.   ..
T Consensus       222 ------------------~~-------~-~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~  275 (330)
T PRK11028        222 ------------------AD-------F-SDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQ  275 (330)
T ss_pred             ------------------Cc-------C-CCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEecccc
Confidence                              00       0 0011234688999999988875 47899999875432111222221   13


Q ss_pred             EEEEEECCCCCEEEEEeC-CCcEEEEeCC
Q psy2671         505 VYMVAWSSDSRLLVSGSA-DSTLKVWNMK  532 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~-D~~v~vwd~~  532 (573)
                      ...++++|||++|++++. +++|.+|++.
T Consensus       276 p~~~~~~~dg~~l~va~~~~~~v~v~~~~  304 (330)
T PRK11028        276 PRGFNIDHSGKYLIAAGQKSHHISVYEID  304 (330)
T ss_pred             CCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence            457899999999998775 8999999874

>KOG0290|consensus

Probab=99.71  E-value=5.7e-15  Score=129.11  Aligned_cols=274  Identities=18%  Similarity=0.260  Sum_probs=183.5

Q ss_pred             cEEEEEEc--CC-CCeEEEEeC----CCeEEEEECC--CCeeeEE-ecCCCCcEEEEEEcCCCC-----eEEEEeeCCeE
Q psy2671         209 AVISVKFS--PN-GRSLASGSG----DTTVRFWDVT--TQTPLFK-CEGHKHWVLCIAWSPDSK-----QLVSGCKNGVI  273 (573)
Q Consensus       209 ~V~~~~fs--p~-g~~las~s~----d~~i~iwd~~--~~~~~~~-~~~h~~~V~~v~~s~dg~-----~l~sgs~dg~i  273 (573)
                      ++.++.||  |+ .-+||.|+.    .+.|.|-.+.  +++.+.. .-.|.-+++.+-|.|+..     .|||.  +..+
T Consensus        46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs--~D~L  123 (364)
T KOG0290|consen   46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS--SDFL  123 (364)
T ss_pred             ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc--cCeE
Confidence            45677777  33 346788873    3456665443  3332221 136888999999999863     35443  3479


Q ss_pred             EEEECCC--Cceec------ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE---EEEecCCCccE
Q psy2671         274 HAWDSST--GKQIG------QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC---VRVLTSHTRSV  342 (573)
Q Consensus       274 ~vwd~~~--~~~~~------~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~h~~~v  342 (573)
                      |+|.+..  ++...      ..-..+..++++..|+..    +-+++.+++-|-++.|||+.++..   ...+-.|...|
T Consensus       124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~----dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV  199 (364)
T KOG0290|consen  124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEV----DPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEV  199 (364)
T ss_pred             EEEeccCcCCceehhhhhccCcccccCCcccccccccC----CcceeEeecccCeEEEEEEeeccccceeeEEEecCcce
Confidence            9998863  22111      112345567888888753    346899999999999999998643   45678999999


Q ss_pred             EEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         343 TCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       343 ~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      ..++|...+  .+++.+.||++|+||++.-.-       ...|                      |....+    ...+.
T Consensus       200 ~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH-------STII----------------------YE~p~~----~~pLl  246 (364)
T KOG0290|consen  200 YDIAFLKGSRDVFASVGADGSVRMFDLRSLEH-------STII----------------------YEDPSP----STPLL  246 (364)
T ss_pred             eEEEeccCccceEEEecCCCcEEEEEeccccc-------ceEE----------------------ecCCCC----CCcce
Confidence            999998744  799999999999999975321       1111                      111100    00000


Q ss_pred             heeeeCCCCcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeE----
Q psy2671         421 KYQAQCPEGEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKF----  494 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~----  494 (573)
                      +......+-+++|+-..| ..|.+.|++....++.++.+|...|+.++|.|. ...|++++.|..+.+||+...-.    
T Consensus       247 RLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~  326 (364)
T KOG0290|consen  247 RLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGE  326 (364)
T ss_pred             eeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCC
Confidence            000001223456655544 578999999888899999999999999999995 56899999999999999865321    


Q ss_pred             --EEeecCCcceEEEEEECC-CCCEEEEEeC
Q psy2671         495 --ITTLRGHVQAVYMVAWSS-DSRLLVSGSA  522 (573)
Q Consensus       495 --~~~~~~h~~~v~~v~~s~-dg~~las~s~  522 (573)
                        +.... -.+.|+.+.|++ .+.+++.+..
T Consensus       327 dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~  356 (364)
T KOG0290|consen  327 DPILAYT-AGGEVNQIQWSSSQPDWIAICFG  356 (364)
T ss_pred             Cchhhhh-ccceeeeeeecccCCCEEEEEec
Confidence              11222 345799999995 5668887754

>KOG1523|consensus

Probab=99.70  E-value=4.4e-15  Score=131.66  Aligned_cols=236  Identities=18%  Similarity=0.325  Sum_probs=174.3

Q ss_pred             CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc--eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         249 KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK--QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       249 ~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      ..+|+|.+|++|+..+|.+.....|.||......  .....+..|...|+++.|.|     ..++|++++.|..-.+|..
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap-----~snrIvtcs~drnayVw~~   84 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAP-----KSNRIVTCSHDRNAYVWTQ   84 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecC-----CCCceeEccCCCCcccccc
Confidence            4579999999999999999999999999987655  22345678899999999988     4568999999999999998


Q ss_pred             CCC---eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCC
Q psy2671         327 ILS---QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG  402 (573)
Q Consensus       327 ~~~---~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~  402 (573)
                      ..+   ++...+..++...+++.|++.. .+++||..+.|.+|-.+..         ..                     
T Consensus        85 ~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~E---------Nd---------------------  134 (361)
T KOG1523|consen   85 PSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQE---------ND---------------------  134 (361)
T ss_pred             CCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecc---------cc---------------------
Confidence            433   3445567788999999998764 6778887777776643210         00                     


Q ss_pred             ceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC
Q psy2671         403 GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK  482 (573)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg  482 (573)
                                                              -|=.      ...-..+...|++++|+|++-+||.||.|+
T Consensus       135 ----------------------------------------WWVs------KhikkPirStv~sldWhpnnVLlaaGs~D~  168 (361)
T KOG1523|consen  135 ----------------------------------------WWVS------KHIKKPIRSTVTSLDWHPNNVLLAAGSTDG  168 (361)
T ss_pred             ----------------------------------------eehh------hhhCCccccceeeeeccCCcceecccccCc
Confidence                                                    0100      001123456799999999999999999999


Q ss_pred             cEEEEeCC------------------CCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-ccccccCc
Q psy2671         483 SIKLWDGR------------------IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IEQDLPGH  543 (573)
Q Consensus       483 ~i~lwd~~------------------~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~~~l~~h  543 (573)
                      .++++..-                  -|+++..+....+.+..+.|+|+|..||=.+.|+++.+=|..... .++.+..-
T Consensus       169 k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~  248 (361)
T KOG1523|consen  169 KCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATA  248 (361)
T ss_pred             ceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhc
Confidence            99998531                  123344444456789999999999999999999999999886654 34444333


Q ss_pred             CCCEEEEEEccCCCEEEEeeCCC
Q psy2671         544 GDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       544 ~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      .-+..++.|-.+. .++.+|.|+
T Consensus       249 ~lP~ls~~~ise~-~vv~ag~~c  270 (361)
T KOG1523|consen  249 QLPLLSVSWISEN-SVVAAGYDC  270 (361)
T ss_pred             cCCceeeEeecCC-ceeecCCCC
Confidence            3677888887664 456666664

>KOG0649|consensus

Probab=99.69  E-value=1.2e-14  Score=123.94  Aligned_cols=207  Identities=15%  Similarity=0.245  Sum_probs=145.8

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      .|.+-+++|.+++|+.|..+|+|-+..+.+--.-   .                        ..+.+             
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~---s------------------------a~~~g-------------   51 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSG---S------------------------AEPPG-------------   51 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhcc---c------------------------cCCCC-------------
Confidence            3455578999999999999999999987542100   0                        00000             


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe------eeEEec--CC-----CCcEEEEEEc
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT------PLFKCE--GH-----KHWVLCIAWS  258 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~------~~~~~~--~h-----~~~V~~v~~s  258 (573)
                           ........+|.++|..++|.  .++|++|+ ||.|+=|.+....      ++.+.+  -|     -..|+++-..
T Consensus        52 -----k~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ld  123 (325)
T KOG0649|consen   52 -----KLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLD  123 (325)
T ss_pred             -----CcceeeccccCCCeeeeeee--hhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEec
Confidence                 00112246899999999998  34666664 6999999876422      111111  12     2358899999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH  338 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h  338 (573)
                      |..+.++.++.|+.++-||+++|+.. ..++||+++|.++.-.     .....+++|++||++|+||.+++++++.+...
T Consensus       124 P~enSi~~AgGD~~~y~~dlE~G~i~-r~~rGHtDYvH~vv~R-----~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~y  197 (325)
T KOG0649|consen  124 PSENSILFAGGDGVIYQVDLEDGRIQ-REYRGHTDYVHSVVGR-----NANGQILSGAEDGTVRVWDTKTQKHVSMIEPY  197 (325)
T ss_pred             cCCCcEEEecCCeEEEEEEecCCEEE-EEEcCCcceeeeeeec-----ccCcceeecCCCccEEEEeccccceeEEeccc
Confidence            98888888889999999999999754 6789999999988732     12346899999999999999999998876532


Q ss_pred             ----------CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671         339 ----------TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       339 ----------~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~  374 (573)
                                ...|.+++.+.+  -+.++....+.+|.++......
T Consensus       198 k~~~~lRp~~g~wigala~~ed--WlvCGgGp~lslwhLrsse~t~  241 (325)
T KOG0649|consen  198 KNPNLLRPDWGKWIGALAVNED--WLVCGGGPKLSLWHLRSSESTC  241 (325)
T ss_pred             cChhhcCcccCceeEEEeccCc--eEEecCCCceeEEeccCCCceE
Confidence                      234666665443  3456667789999988765443

>KOG2110|consensus

Probab=99.69  E-value=1.9e-13  Score=123.87  Aligned_cols=236  Identities=17%  Similarity=0.263  Sum_probs=155.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC--CcEEEEECC
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD--GAIRIWDVI  327 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d--g~v~iwd~~  327 (573)
                      ..+..+.|+.|...|..|+.|| .+++..+.-........+. ..|-..-|+       ..++|..+.+  +.+++++..
T Consensus         6 ~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~-~~IvEmLFS-------SSLvaiV~~~qpr~Lkv~~~K   76 (391)
T KOG2110|consen    6 PTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEG-VSIVEMLFS-------SSLVAIVSIKQPRKLKVVHFK   76 (391)
T ss_pred             cceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCC-eEEEEeecc-------cceeEEEecCCCceEEEEEcc
Confidence            3466777999999899999998 4666654322111111111 112222221       1234444333  447788776


Q ss_pred             CCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC-cceeeEEEeccCceeEEEEcCCCceee
Q psy2671         328 LSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH-AHWVNTLALSTDYLMRVEATSTGGFKY  406 (573)
Q Consensus       328 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~  406 (573)
                      .+..+..+. ....|.++.++...+++ +-.+ .|.|||+++.++++++..- ...-...+++++               
T Consensus        77 k~~~ICe~~-fpt~IL~VrmNr~RLvV-~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n---------------  138 (391)
T KOG2110|consen   77 KKTTICEIF-FPTSILAVRMNRKRLVV-CLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPN---------------  138 (391)
T ss_pred             cCceEEEEe-cCCceEEEEEccceEEE-EEcc-cEEEEecccceeehhhhccCCCccceEeeccC---------------
Confidence            654443322 24568888887665443 3333 3999999999988877543 111112222211               


Q ss_pred             CCCCchhhhhhhhhheeeeCCCCcEEEE--EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc-
Q psy2671         407 DPANPEESSKHALAKYQAQCPEGEKLVS--GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS-  483 (573)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~-  483 (573)
                                          +.+.++|-  ....|.|.+||..+-+ ....+..|.+.+.+++|+++|.+||++|..|+ 
T Consensus       139 --------------------~~n~ylAyp~s~t~GdV~l~d~~nl~-~v~~I~aH~~~lAalafs~~G~llATASeKGTV  197 (391)
T KOG2110|consen  139 --------------------NANCYLAYPGSTTSGDVVLFDTINLQ-PVNTINAHKGPLAALAFSPDGTLLATASEKGTV  197 (391)
T ss_pred             --------------------CCCceEEecCCCCCceEEEEEcccce-eeeEEEecCCceeEEEECCCCCEEEEeccCceE
Confidence                                11223332  1235889999987643 45667799999999999999999999999998 


Q ss_pred             EEEEeCCCCeEEEeecCCc--ceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         484 IKLWDGRIGKFITTLRGHV--QAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       484 i~lwd~~~~~~~~~~~~h~--~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ||++.+.+|+.+..|+.-.  ..|++++|+||+++|++.|..++|++|.+..
T Consensus       198 IRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  198 IRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             EEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecc
Confidence            6999999999999987432  3588999999999999999999999998854

>KOG1524|consensus

Probab=99.69  E-value=2.7e-15  Score=141.49  Aligned_cols=261  Identities=19%  Similarity=0.373  Sum_probs=175.8

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEE----c----CCCCeEEEEeeCCeEEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW----S----PDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~----s----~dg~~l~sgs~dg~i~vw  276 (573)
                      .|...|.|+.|+.+...+.+++.+..+.-||+.+.. .....-....|....+    +    .....++.++.||.+.+.
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s-~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il   90 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDS-VEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL   90 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchh-hhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence            578888899999888766666544444444544321 1111111111111110    0    123468888999998887


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIY  354 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~  354 (573)
                      +-. | .+.+....|.+.+.+-.|+|     +|.-|+++|+||.|++|.- ++-...++.....+|.|++|.++.  .++
T Consensus        91 ~k~-~-rVE~sv~AH~~A~~~gRW~~-----dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~  162 (737)
T KOG1524|consen   91 NKS-A-RVERSISAHAAAISSGRWSP-----DGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVF  162 (737)
T ss_pred             ccc-c-hhhhhhhhhhhhhhhcccCC-----CCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEE
Confidence            542 2 34456778999999999987     6677999999999999984 343334455567789999998765  455


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +.+.  .+.+=.+........++.|.+-|.++.++                                     +..+.+++
T Consensus       163 c~g~--h~~IKpL~~n~k~i~WkAHDGiiL~~~W~-------------------------------------~~s~lI~s  203 (737)
T KOG1524|consen  163 CQGG--HISIKPLAANSKIIRWRAHDGLVLSLSWS-------------------------------------TQSNIIAS  203 (737)
T ss_pred             ecCC--eEEEeecccccceeEEeccCcEEEEeecC-------------------------------------ccccceee
Confidence            5443  34433444444455567777777666655                                     44678999


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg  514 (573)
                      |++|...++||...  ..+..-..|..+|++|+|.|+ +.++.+|.+ +.|+=..           ..+.|..++||+||
T Consensus       204 gGED~kfKvWD~~G--~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R~~~p-----------~~GSifnlsWS~DG  268 (737)
T KOG1524|consen  204 GGEDFRFKIWDAQG--ANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TARFSSP-----------RVGSIFNLSWSADG  268 (737)
T ss_pred             cCCceeEEeecccC--cccccCChhccceeeeeeccc-cceeeeeee-eeeecCC-----------CccceEEEEEcCCC
Confidence            99999999999653  344555678889999999999 788888764 4442222           23568999999999


Q ss_pred             CEEEEEeCCCcEEE
Q psy2671         515 RLLVSGSADSTLKV  528 (573)
Q Consensus       515 ~~las~s~D~~v~v  528 (573)
                      ..++.|...|.+.+
T Consensus       269 TQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  269 TQATCGTSTGQLIV  282 (737)
T ss_pred             ceeeccccCceEEE
Confidence            99999988887644

>KOG0771|consensus

Probab=99.69  E-value=3.9e-15  Score=137.04  Aligned_cols=189  Identities=22%  Similarity=0.320  Sum_probs=142.9

Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .+++++.+| .+++++.||++|+|+............|...|..+.++                                
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS--------------------------------  195 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFS--------------------------------  195 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeC--------------------------------
Confidence            678888885 89999999999999977766666666777777777776                                


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee--ccccccEEEEEECCCC-----CEEEEeeCCCcEEEEeCCCCeE
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM--TGHQQLINCVEFSPDG-----RIIASASFDKSIKLWDGRIGKF  494 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~sp~g-----~~las~s~dg~i~lwd~~~~~~  494 (573)
                           |+|+.|++.+.| ..++|+.+++.. +.+.  .+.......+.|+.|+     .+.+....-+.|+.||....+.
T Consensus       196 -----~dgk~lasig~d-~~~VW~~~~g~~-~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~  268 (398)
T KOG0771|consen  196 -----PDGKFLASIGAD-SARVWSVNTGAA-LARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSG  268 (398)
T ss_pred             -----CCCcEEEEecCC-ceEEEEeccCch-hhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecc
Confidence                 568899999999 999999987632 2222  2333456778898887     3444445566777776543221


Q ss_pred             ------EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc-cccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         495 ------ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ-DLPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       495 ------~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~-~l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                            .+.+.. ...|+++++|+||+++|.|+.||.|-|++..+-++++ .-+.|...|+.+.|+||.+++++.+.|.+
T Consensus       269 ~~~l~~~~~~~~-~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~  347 (398)
T KOG0771|consen  269 SNFLRLRKKIKR-FKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNE  347 (398)
T ss_pred             ccccchhhhhhc-cCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCc
Confidence                  111222 3479999999999999999999999999998877654 34679999999999999999999998887


Q ss_pred             EEEc
Q psy2671         568 LRLW  571 (573)
Q Consensus       568 i~iw  571 (573)
                      ..+-
T Consensus       348 ~~v~  351 (398)
T KOG0771|consen  348 AAVT  351 (398)
T ss_pred             eeEE
Confidence            6653

>KOG4497|consensus

Probab=99.69  E-value=1.6e-14  Score=128.52  Aligned_cols=356  Identities=17%  Similarity=0.277  Sum_probs=195.9

Q ss_pred             EEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEee
Q psy2671         116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRP  195 (573)
Q Consensus       116 l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (573)
                      ++|||+|+++|+++.- .+.|-|.++-+...                                                 
T Consensus        14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~q-------------------------------------------------   43 (447)
T KOG4497|consen   14 CSFSPCGNYIASLSRY-RLVIRDSETLQLHQ-------------------------------------------------   43 (447)
T ss_pred             eeECCCCCeeeeeeee-EEEEeccchhhHHH-------------------------------------------------
Confidence            4799999999999865 67788876643210                                                 


Q ss_pred             ccccccCCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeE
Q psy2671         196 VTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVI  273 (573)
Q Consensus       196 ~~~~~~~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i  273 (573)
                      .-.|       -+.|.-+.|+.|..+++ .+..|+.|.+|++...+--..+....+++.++.|||||+.|+ +...|-.|
T Consensus        44 lf~c-------ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lri  116 (447)
T KOG4497|consen   44 LFLC-------LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRI  116 (447)
T ss_pred             HHHH-------HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEE
Confidence            0001       12344456766665554 456788999999987665555666677899999999997655 56778899


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC------------------------------------
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK------------------------------------  317 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------------------------------------  317 (573)
                      .||.+.+.+...-+..  +..+..++|+|     +++..+..+.                                    
T Consensus       117 TVWSL~t~~~~~~~~p--K~~~kg~~f~~-----dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPd  189 (447)
T KOG4497|consen  117 TVWSLNTQKGYLLPHP--KTNVKGYAFHP-----DGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPD  189 (447)
T ss_pred             EEEEeccceeEEeccc--ccCceeEEECC-----CCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCC
Confidence            9999987665322222  22345566655     3343333222                                    


Q ss_pred             CCcEEEEECCCCeEEEEecCCC-ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeE
Q psy2671         318 DGAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR  395 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  395 (573)
                      +..+-+||....-.  .+..|. -.+..+.|+|.+ .++.|+.|+.+|+-+--+=++...+ +|-               
T Consensus       190 g~~laVwd~~Leyk--v~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~ef-lhl---------------  251 (447)
T KOG4497|consen  190 GNWLAVWDNVLEYK--VYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEF-LHL---------------  251 (447)
T ss_pred             CcEEEEecchhhhe--eeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhh-ccc---------------
Confidence            22233444322111  111111 345556666633 4556666666655331110000000 000               


Q ss_pred             EEEcCCCceeeCCCCchhh--hhhhhh---h---eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee------eccccc
Q psy2671         396 VEATSTGGFKYDPANPEES--SKHALA---K---YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR------MTGHQQ  461 (573)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~--~~~~~~---~---~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~------~~~h~~  461 (573)
                                ....++...  .+....   .   ...+.| .++=+.-..... .+|.....-..+..      .....-
T Consensus       252 ----------~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p-~~~~a~~~~~se-~~YE~~~~pv~~~~lkp~tD~pnPk~  319 (447)
T KOG4497|consen  252 ----------CSYHDPTLHLLEKETFSIVQLLHHCLSFTP-TDLEAHIWEESE-TIYEQQMTPVKVHKLKPPTDFPNPKC  319 (447)
T ss_pred             ----------hhccCchhhhhhhhhcchhhhcccccccCC-CccccCccccch-hhhhhhhcceeeecccCCCCCCCccc
Confidence                      000001000  000000   0   000001 000000000000 00110000000111      111223


Q ss_pred             cEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         462 LINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      .+.-++||+|..++|+-.  .-..+-+||++..+....+. ...+|....|.|....|+.+.....+++|.......+..
T Consensus       320 g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~v  398 (447)
T KOG4497|consen  320 GAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGV  398 (447)
T ss_pred             ccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEec
Confidence            466799999999998864  23568999998876544442 345789999999998888887778899999877555543


Q ss_pred             ccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         540 LPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       540 l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                       ++..-.|..+.|.-+|..++-.|+|.-
T Consensus       399 -P~~GF~i~~l~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  399 -PKKGFNIQKLQWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             -CCCCceeeeEEecCCCcEEEEEcCCce
Confidence             333457999999999999999999853

>KOG1240|consensus

Probab=99.68  E-value=1.8e-14  Score=148.66  Aligned_cols=338  Identities=15%  Similarity=0.155  Sum_probs=199.0

Q ss_pred             cccccCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         197 TRCTSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       197 ~~~~~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                      +..+.++..|...|..++.++. +.+++|||.||+|++|+.+.-       +...++..-...+.++.+-+.+.++|.++
T Consensus      1038 G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t 1117 (1431)
T KOG1240|consen 1038 GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVST 1117 (1431)
T ss_pred             ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEc
Confidence            3445667778999999988765 599999999999999997641       11222333456788999999999999999


Q ss_pred             eCCeEEEEECCCC--cee----cccccCCc-ccEE-EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCC
Q psy2671         269 KNGVIHAWDSSTG--KQI----GQPMRGHK-QWIT-ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSH  338 (573)
Q Consensus       269 ~dg~i~vwd~~~~--~~~----~~~~~~h~-~~v~-~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h  338 (573)
                      .||.|++.+++.-  +..    ......++ +.+. ..+|.   .......++.+..-+.|..||++.......+  ...
T Consensus      1118 ~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~---~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1118 KDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFT---AIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred             CCCeEEEEEccccccccceeeeeecccccCCCceEEeeccc---ccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence            9999999998752  110    01111122 1222 22221   1112236788888899999999876544433  234


Q ss_pred             CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         339 TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       339 ~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      .+.|++++.++.+ .++.|+..|.+-+||++-+..+..+. ++..+++.+...+-.                        
T Consensus      1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~------------------------ 1250 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTY------------------------ 1250 (1431)
T ss_pred             ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccC------------------------
Confidence            5779999998765 78999999999999999877766554 233445444433211                        


Q ss_pred             hhhhheeeeCCCCcEEEE-Ee-CCCeEEEEcCCCCccceeeecc------------------ccccEEEEEECCCCCEEE
Q psy2671         417 HALAKYQAQCPEGEKLVS-GS-DDFTLFLWNPEKEKKSLARMTG------------------HQQLINCVEFSPDGRIIA  476 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~s-g~-~dg~i~lwd~~~~~~~~~~~~~------------------h~~~v~~v~~sp~g~~la  476 (573)
                                +.....++ ++ ..+.+-+|+++++........+                  +.-......+..-+..+.
T Consensus      1251 ----------~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~l 1320 (1431)
T KOG1240|consen 1251 ----------PQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLL 1320 (1431)
T ss_pred             ----------CCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceee
Confidence                      11123333 33 4567778887765322111111                  111122233333456888


Q ss_pred             EeeCCCcEEEEeCCCCeEE-EeecCCcceEEEEEECCCCCEEEEEeCCCcEEE-EeCCc-----c---ccc-----cccc
Q psy2671         477 SASFDKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV-WNMKT-----K---KIE-----QDLP  541 (573)
Q Consensus       477 s~s~dg~i~lwd~~~~~~~-~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~v-wd~~~-----~---~~~-----~~l~  541 (573)
                      +|+.|..|+.||....+.. ....+..........+. +.-++.++.--...+ .....     +   +..     ..-.
T Consensus      1321 tggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~-~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~ 1399 (1431)
T KOG1240|consen 1321 TGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESY-DLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPST 1399 (1431)
T ss_pred             ecCCccceeeccCCCcccccccccCccccccccchhc-cccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcc
Confidence            9999999999997665432 12222222222222221 112222221000000 00000     0   000     1123


Q ss_pred             CcCCCEEEEEEccCC-CEEEEeeCCCcEEEcc
Q psy2671         542 GHGDEVYAVDWAPDG-EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       542 ~h~~~v~~~~~s~d~-~~l~s~~~d~~i~iw~  572 (573)
                      .|.+.|+++++-... .+|++++.||.|+||+
T Consensus      1400 ~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1400 YHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             cccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence            578899999876554 4789999999999995

>KOG2111|consensus

Probab=99.67  E-value=2.6e-13  Score=120.53  Aligned_cols=236  Identities=18%  Similarity=0.331  Sum_probs=155.3

Q ss_pred             cEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc--cccCCcccEEEEEecccccCCCCCEEEE-EeCC------CcE
Q psy2671         251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ--PMRGHKQWITALSWEPFHLNHQCRRFAS-SGKD------GAI  321 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~~~~l~s-~~~d------g~v  321 (573)
                      ...+++|+.|...+++|..+| .++|+.+.-+....  ...+- -.+..+-       ...++++- ||.+      ..+
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G-~~~veML-------fR~N~laLVGGg~~pky~pNkv   77 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGG-FKIVEML-------FRSNYLALVGGGSRPKYPPNKV   77 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCc-hhhhhHh-------hhhceEEEecCCCCCCCCCceE
Confidence            356699999999998888777 78888764222110  00000 0011000       01234433 3322      569


Q ss_pred             EEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       322 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      .|||-...+++..+. ...+|.++.+.++..++  -..+.|.+|...+. +..+.++...        +|.+......  
T Consensus        78 iIWDD~k~~~i~el~-f~~~I~~V~l~r~riVv--vl~~~I~VytF~~n~k~l~~~et~~--------NPkGlC~~~~--  144 (346)
T KOG2111|consen   78 IIWDDLKERCIIELS-FNSEIKAVKLRRDRIVV--VLENKIYVYTFPDNPKLLHVIETRS--------NPKGLCSLCP--  144 (346)
T ss_pred             EEEecccCcEEEEEE-eccceeeEEEcCCeEEE--EecCeEEEEEcCCChhheeeeeccc--------CCCceEeecC--
Confidence            999977777766654 35688999988775433  34678889887633 2222222110        1111100000  


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE-EeCCCeEEEEcCCCCcc-ceeeeccccccEEEEEECCCCCEEEEe
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS-GSDDFTLFLWNPEKEKK-SLARMTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-g~~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g~~las~  478 (573)
                                               ..+..+||. |-.-|.|++-|+..... ....+..|...|.|++.+-+|.++||+
T Consensus       145 -------------------------~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATa  199 (346)
T KOG2111|consen  145 -------------------------TSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATA  199 (346)
T ss_pred             -------------------------CCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEe
Confidence                                     011223332 33458899988876544 456788999999999999999999999


Q ss_pred             eCCCc-EEEEeCCCCeEEEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         479 SFDKS-IKLWDGRIGKFITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       479 s~dg~-i~lwd~~~~~~~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      |..|+ |||||..+|..+..++.  ....|++++||||+.+||++|.-|+++|+.++.
T Consensus       200 StkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  200 STKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             ccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            99998 79999999999999863  345799999999999999999999999998865

>KOG2394|consensus

Probab=99.67  E-value=3.8e-15  Score=140.73  Aligned_cols=248  Identities=19%  Similarity=0.334  Sum_probs=155.7

Q ss_pred             EEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccC-C--cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC
Q psy2671         253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG-H--KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS  329 (573)
Q Consensus       253 ~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~-h--~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  329 (573)
                      ....++-.|++|+..- ...+.+|+.+.+.....++.. +  ...-.+-.|+.+.-.+.+--++.+=.-|.+.+.|....
T Consensus       127 ~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~  205 (636)
T KOG2394|consen  127 TNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINF  205 (636)
T ss_pred             eeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchhh
Confidence            3344444566654432 235777877654333222110 0  00112223332222233334666667788888887653


Q ss_pred             eEEEEec----CCCccEEEEEECC--CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671         330 QCVRVLT----SHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG  403 (573)
Q Consensus       330 ~~~~~~~----~h~~~v~~~~~~~--~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~  403 (573)
                      +..+.+.    -....++|+.|-+  ++.++.+-.+|.+.++|.....      +-..        +.            
T Consensus       206 ~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~------~~t~--------p~------------  259 (636)
T KOG2394|consen  206 EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC------GATA--------PS------------  259 (636)
T ss_pred             HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccc------cCCC--------Cc------------
Confidence            2211111    1346799999954  4577888889999988752100      0000        00            


Q ss_pred             eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc
Q psy2671         404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS  483 (573)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~  483 (573)
                                        +. ..+.+..++..       .|.....+.++..+.--+..|+..+|+|||++||+-|.||.
T Consensus       260 ------------------~~-~~k~~~~f~i~-------t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGf  313 (636)
T KOG2394|consen  260 ------------------YQ-ALKDGDQFAIL-------TSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGF  313 (636)
T ss_pred             ------------------cc-ccCCCCeeEEe-------eeeccccCCccceeEeccccccceeEcCCCceEEEEecCce
Confidence                              00 00112222211       11111112233333333457899999999999999999999


Q ss_pred             EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       484 i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                      +||+|..+.+++..++.--+...|++|||||++|++|+.|-.|.||.+..++.+..-.||.+-|..|+|.
T Consensus       314 LRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD  383 (636)
T KOG2394|consen  314 LRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD  383 (636)
T ss_pred             EEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence            9999999988888887777889999999999999999999999999999999999999999999999997

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=4.6e-15  Score=149.55  Aligned_cols=215  Identities=20%  Similarity=0.288  Sum_probs=137.6

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCC---CeEEEEECCCCee--eEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEE-
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGD---TTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAW-  276 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d---~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vw-  276 (573)
                      .+|...+.+.+|||||+.|+.++.+   ..|.+||+.+++.  +....+|.   .+++|+|||++|+.++ .+|.+.+| 
T Consensus       200 t~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~---~~~~wSPDG~~La~~~~~~g~~~Iy~  276 (429)
T PRK01742        200 NRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHN---GAPAFSPDGSRLAFASSKDGVLNIYV  276 (429)
T ss_pred             ccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCcc---CceeECCCCCEEEEEEecCCcEEEEE
Confidence            3567789999999999999988654   4799999988753  33344443   4689999999988765 67765555 


Q ss_pred             -ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCe-EEEEecCCCccEEEEEECCCcEE
Q psy2671         277 -DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQ-CVRVLTSHTRSVTCIRWGGSGLI  353 (573)
Q Consensus       277 -d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~~~~~~l  353 (573)
                       |+.++..  ..+..+...+....|.|     +++.++.. ..+|..+||++.... ....+ .+..  .+..|+     
T Consensus       277 ~d~~~~~~--~~lt~~~~~~~~~~wSp-----DG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~S-----  341 (429)
T PRK01742        277 MGANGGTP--SQLTSGAGNNTEPSWSP-----DGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQIS-----  341 (429)
T ss_pred             EECCCCCe--EeeccCCCCcCCEEECC-----CCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCC-----
Confidence             6665543  23444555566777766     56766654 467888888764321 11111 1111  122333     


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                                                                                               |+|+.++
T Consensus       342 -------------------------------------------------------------------------pDG~~ia  348 (429)
T PRK01742        342 -------------------------------------------------------------------------ADGKTLV  348 (429)
T ss_pred             -------------------------------------------------------------------------CCCCEEE
Confidence                                                                                     4444554


Q ss_pred             EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC--CCCeEEEeecCCcceEEEEEEC
Q psy2671         434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG--RIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~--~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                      ..+.++. .+||+.++...  .+..+ .....+.|+|||++|+.++.++.+.+|++  ..|+....+.+|.+.+...+||
T Consensus       349 ~~~~~~i-~~~Dl~~g~~~--~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~ws  424 (429)
T PRK01742        349 MINGDNV-VKQDLTSGSTE--VLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWS  424 (429)
T ss_pred             EEcCCCE-EEEECCCCCeE--EecCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccC
Confidence            4444332 23555443221  11111 11245789999999999999998888875  3577888888888888899999


Q ss_pred             CC
Q psy2671         512 SD  513 (573)
Q Consensus       512 ~d  513 (573)
                      |-
T Consensus       425 p~  426 (429)
T PRK01742        425 PY  426 (429)
T ss_pred             CC
Confidence            84

>KOG1240|consensus

Probab=99.65  E-value=1.9e-14  Score=148.45  Aligned_cols=356  Identities=18%  Similarity=0.246  Sum_probs=205.5

Q ss_pred             ccccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         102 CTSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      ++..|..|...|..++.++.. .+++|||.||+|||||+..-..-      .                            
T Consensus      1040 lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~------~---------------------------- 1085 (1431)
T KOG1240|consen 1040 LVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGE------G---------------------------- 1085 (1431)
T ss_pred             EeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcC------c----------------------------
Confidence            455667788899999887765 99999999999999998532100      0                            


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--e-----eeE--EecCCCCc
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--T-----PLF--KCEGHKHW  251 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~-----~~~--~~~~h~~~  251 (573)
                              .      ..++..+..--+..+.++.+.+.+..+|.++.||.|++.++.-.  +     ...  ..+.....
T Consensus      1086 --------~------s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~v 1151 (1431)
T KOG1240|consen 1086 --------G------SARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVV 1151 (1431)
T ss_pred             --------c------eeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCce
Confidence                    0      00011111113467889999999999999999999999998651  1     111  11222233


Q ss_pred             EEEEEEcC-CCC-eEEEEeeCCeEEEEECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         252 VLCIAWSP-DSK-QLVSGCKNGVIHAWDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       252 V~~v~~s~-dg~-~l~sgs~dg~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      |..-+|.. ++. .|+.+..-+.|..||+........ ......+.|++++.+|     .+..++.|...|.+.+||++-
T Consensus      1152 v~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp-----~~~WlviGts~G~l~lWDLRF 1226 (1431)
T KOG1240|consen 1152 VSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDP-----WCNWLVIGTSRGQLVLWDLRF 1226 (1431)
T ss_pred             EEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecC-----CceEEEEecCCceEEEEEeec
Confidence            45556654 333 677888889999999876543321 1223346788888766     456899999999999999988


Q ss_pred             CeEEEEec-CCCccEEEEEEC---C-CcE-EEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         329 SQCVRVLT-SHTRSVTCIRWG---G-SGL-IYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       329 ~~~~~~~~-~h~~~v~~~~~~---~-~~~-l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      +.++.... .+..++..+...   + +.. +.+++ ..+.|.+|++.+|.....+-..           +        ..
T Consensus      1227 ~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s-----------~--------~~ 1287 (1431)
T KOG1240|consen 1227 RVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWAS-----------D--------GA 1287 (1431)
T ss_pred             CceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcC-----------C--------CC
Confidence            77665532 333555555443   2 133 44444 5788999999887443332111           0        00


Q ss_pred             CceeeC-CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         402 GGFKYD-PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       402 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                      ..+.+. |.+...........+...+..+..+.+|+.|..||.||............+..........+.+ ..++.|+.
T Consensus      1288 p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~-~~~i~~~~ 1366 (1431)
T KOG1240|consen 1288 PILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYD-LSTIPGSQ 1366 (1431)
T ss_pred             cchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhcc-ccccCCCc
Confidence            001100 0000000000001122233446688999999999999987655443333333222222222221 12222221


Q ss_pred             CCcEEE-E-----eCCCCeEEEe--------ecCCcceEEEEEECCC-CCEEEEEeCCCcEEEEe
Q psy2671         481 DKSIKL-W-----DGRIGKFITT--------LRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWN  530 (573)
Q Consensus       481 dg~i~l-w-----d~~~~~~~~~--------~~~h~~~v~~v~~s~d-g~~las~s~D~~v~vwd  530 (573)
                      --...+ .     +...++....        -..|..+|+++++... ..+|++++.||.|+||.
T Consensus      1367 ~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1367 FIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             cchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence            100000 0     0100101111        1247788998887654 45899999999999993

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.65  E-value=1.1e-12  Score=127.80  Aligned_cols=295  Identities=18%  Similarity=0.177  Sum_probs=169.0

Q ss_pred             EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCCceeccccc
Q psy2671         211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       211 ~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      ..+.|+|||+++.+++.|+.|.++|+.+.+.+.+.+.-. .-.++++|+||++++++. ..+.+.++|.++.+.+.....
T Consensus        40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~  118 (369)
T PF02239_consen   40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPT  118 (369)
T ss_dssp             EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE-
T ss_pred             eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeeccc
Confidence            357799999999999999999999999999887776543 358899999999998775 689999999988776543211


Q ss_pred             ------CCcccEEEEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCc-EE-EEEeCC
Q psy2671         290 ------GHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSG-LI-YSASQD  359 (573)
Q Consensus       290 ------~h~~~v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~-~l-~s~s~d  359 (573)
                            +....+.++...|     ....++..-. .+.|.+-|....+.... ............|.+++ .+ ++...+
T Consensus       119 ~~~~~~~~~~Rv~aIv~s~-----~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~s  193 (369)
T PF02239_consen  119 GGMPVDGPESRVAAIVASP-----GRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGS  193 (369)
T ss_dssp             -EE-TTTS---EEEEEE-S-----SSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGG
T ss_pred             ccccccccCCCceeEEecC-----CCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeeccccc
Confidence                  1233455555444     2344554444 47777778665433221 21223345667888876 34 445567


Q ss_pred             CeEEEEeCCCCeeeEeccC----CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671         360 RTIKVWRASDGVMCRTLEG----HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg  435 (573)
                      ..|-++|..++.....+..    |......+ .++.+-..          |                 .....+...++.
T Consensus       194 n~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~v----------w-----------------~~~~~~~~~~~~  245 (369)
T PF02239_consen  194 NKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPV----------W-----------------ATSGLGYFAIPL  245 (369)
T ss_dssp             TEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEE----------E-----------------EEEBSSSSEEEE
T ss_pred             ceeEEEeeccceEEEEeeccccccccccccc-cCCCcceE----------E-----------------eeccccceeccc
Confidence            8999999998876554321    11111111 01110000          0                 000011122122


Q ss_pred             eCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe----eCCCcEEEEeCCCCeEEEeecCC-cceEEEEEE
Q psy2671         436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA----SFDKSIKLWDGRIGKFITTLRGH-VQAVYMVAW  510 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~----s~dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~  510 (573)
                      -....+.+||.... +.+..+...... ..+..+|+++++.+.    ...++|.++|.++.+.+.++... ...+..+.|
T Consensus       246 ig~~~v~v~d~~~w-kvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef  323 (369)
T PF02239_consen  246 IGTDPVSVHDDYAW-KVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEF  323 (369)
T ss_dssp             EE--TTT-STTTBT-SEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE
T ss_pred             ccCCccccchhhcC-eEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEE
Confidence            22223445665543 334444444444 678889999999987    45589999999999887777532 234889999


Q ss_pred             CCCCCEEEEEeCC--CcEEEEeCCccccccccc
Q psy2671         511 SSDSRLLVSGSAD--STLKVWNMKTKKIEQDLP  541 (573)
Q Consensus       511 s~dg~~las~s~D--~~v~vwd~~~~~~~~~l~  541 (573)
                      ++||+.+..+..+  +.|.+||..+.+.+.+++
T Consensus       324 ~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  324 NPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             -TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred             CCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence            9999977665543  369999999998887765

...

>KOG2110|consensus

Probab=99.63  E-value=1.1e-13  Score=125.25  Aligned_cols=143  Identities=14%  Similarity=0.263  Sum_probs=114.6

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccce--eeeccccccEEEEEECCCCCEEEEe--eCCCcEEEEeCCCCeEEEeecCCcce
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSL--ARMTGHQQLINCVEFSPDGRIIASA--SFDKSIKLWDGRIGKFITTLRGHVQA  504 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~--~~~~~h~~~v~~v~~sp~g~~las~--s~dg~i~lwd~~~~~~~~~~~~h~~~  504 (573)
                      .++|+++-++. |++||+.+.+..-  .....+...+.++.+++.+.++|--  ...|.|.+||+.+-+.+..+.+|.+.
T Consensus        97 r~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~  175 (391)
T KOG2110|consen   97 RKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGP  175 (391)
T ss_pred             cceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCc
Confidence            34566665554 9999988754321  1222345556666777777788853  34689999999999999999999999


Q ss_pred             EEEEEECCCCCEEEEEeCCCc-EEEEeCCcccccccccCc--CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         505 VYMVAWSSDSRLLVSGSADST-LKVWNMKTKKIEQDLPGH--GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~-v~vwd~~~~~~~~~l~~h--~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +-+++|+++|.+|||+|..|+ |||+.+.++..++.++.-  ...|++++|+||+++|++.|..++|.+|+
T Consensus       176 lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFK  246 (391)
T KOG2110|consen  176 LAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFK  246 (391)
T ss_pred             eeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEE
Confidence            999999999999999999887 799999999888777543  24689999999999999999999999985

>KOG1310|consensus

Probab=99.62  E-value=4.9e-15  Score=140.19  Aligned_cols=222  Identities=23%  Similarity=0.322  Sum_probs=152.1

Q ss_pred             EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      ..+.||++.|+|++|+.||..|++||.|-.+.|||+-.-+.+...-.||...|.++.|.|..   ..+.+++|+.|..|+
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~t---nnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYT---NNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccC---CCeEEEeccCcceEE
Confidence            46789999999999999999999999999999999987777666778999999999999853   446889999999999


Q ss_pred             EEECCC----------CeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEec
Q psy2671         323 IWDVIL----------SQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALS  389 (573)
Q Consensus       323 iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s  389 (573)
                      ++|+..          ....+....|...|..++..+++  .+++++.||+|+-+|+++...+..-. .+..   .+...
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~---l~ny~  197 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSI---LVNYN  197 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHH---HHHhc
Confidence            999974          22344566788889888887665  89999999999999998642221110 0000   00000


Q ss_pred             cCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCcc-----------------
Q psy2671         390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKK-----------------  451 (573)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~-----------------  451 (573)
                      ++-                         ...+....+| +..+|+.|+.|--.++||.+...+                 
T Consensus       198 ~~l-------------------------ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~  252 (758)
T KOG1310|consen  198 PQL-------------------------IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCR  252 (758)
T ss_pred             hhh-------------------------heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccc
Confidence            000                         0000111122 345788888888888888332110                 


Q ss_pred             ce-eeecccc-----------ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         452 SL-ARMTGHQ-----------QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       452 ~~-~~~~~h~-----------~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                      +. ....+|-           ..++-++|+|+|.-|+..-....|.++|+..++..
T Consensus       253 cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~  308 (758)
T KOG1310|consen  253 CVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP  308 (758)
T ss_pred             hhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence            00 0111222           11456789999987666555668999998766543

>PF08154 NLE: NLE (NUC135) domain; InterPro: IPR012972 This domain is located N-terminal to WD40 repeats(IPR001680 from INTERPRO)

Probab=99.60  E-value=2.2e-15  Score=105.13  Aligned_cols=62  Identities=34%  Similarity=0.664  Sum_probs=58.5

Q ss_pred             cEEEEEECCCC--CcccCeEEecCCCCHHHHHHHHHHhh-cCCCCccEEEEeccccccchhhccC
Q psy2671          12 RILTRFKSDDG--EVAGDLLDLPLNVNTEHLSLIVNSLL-QQDEGTPYLFYVNETEITKTLADVL   73 (573)
Q Consensus        12 ~~~~~~~~~~~--~~~~~~~~vp~~~~~~~l~~~~~~l~-~~~~~~~~~~~~~~~~i~~~l~~~~   73 (573)
                      ||+|+|.++++  ..++.+|.||.++++++|+.|+|+|| +.++++||+|++++++|+.+|++++
T Consensus         1 qv~v~F~t~~~~~~~~~~~~~VP~~~t~~~Ls~LvN~LL~~~~~~vpfdF~i~~~~lr~sL~~~l   65 (65)
T PF08154_consen    1 QVQVQFVTEDGEYEVPGTPISVPSNITRKELSELVNQLLDDEEEPVPFDFLINGEELRTSLEEHL   65 (65)
T ss_pred             CEEEEEEcCCCCccCCCCCEEEeCCCCHHHHHHHHHHHhccCCCCCcEEEEECCEEeechHHHhC
Confidence            69999999999  78999999999999999999999999 7889999999999999999998764

It is found in the microtubule-associated protein Q12024 from SWISSPROT [].

>KOG2394|consensus

Probab=99.59  E-value=3.6e-14  Score=134.25  Aligned_cols=96  Identities=29%  Similarity=0.630  Sum_probs=84.8

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~  286 (573)
                      .+.|...+|||||++||+.|.||.+||+|..+.+.+...+..-+..+|++|||||++|++|+.|..|.||.+..++.+. 
T Consensus       290 ~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVA-  368 (636)
T KOG2394|consen  290 EGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVA-  368 (636)
T ss_pred             cccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEE-
Confidence            3488999999999999999999999999999877766666666779999999999999999999999999998877653 


Q ss_pred             cccCCcccEEEEEeccc
Q psy2671         287 PMRGHKQWITALSWEPF  303 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~  303 (573)
                      .-.||+.||+.++|.|+
T Consensus       369 RGqGHkSWVs~VaFDpy  385 (636)
T KOG2394|consen  369 RGQGHKSWVSVVAFDPY  385 (636)
T ss_pred             eccccccceeeEeeccc
Confidence            35689999999999975

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.59  E-value=5.8e-12  Score=122.84  Aligned_cols=287  Identities=20%  Similarity=0.249  Sum_probs=167.1

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      -..++|+|||+++..++.||.|.++|+.+++.+.+..                                           
T Consensus        39 h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~-------------------------------------------   75 (369)
T PF02239_consen   39 HAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK-------------------------------------------   75 (369)
T ss_dssp             EEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-------------------------------------------
T ss_pred             eeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe-------------------------------------------
Confidence            3457899999999999999999999999886543211                                           


Q ss_pred             EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEe-CCCeEEEEECCCCeeeEEecC-------CCCcEEEEEEcCCCCeE
Q psy2671         193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS-GDTTVRFWDVTTQTPLFKCEG-------HKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s-~d~~i~iwd~~~~~~~~~~~~-------h~~~V~~v~~s~dg~~l  264 (573)
                                   -.....++++||||++++++. ..+.+.++|.++.+++..+..       ....+.++..+|....+
T Consensus        76 -------------~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~f  142 (369)
T PF02239_consen   76 -------------VGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEF  142 (369)
T ss_dssp             --------------SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEE
T ss_pred             -------------cCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEE
Confidence                         022456899999999998765 689999999999988876542       23467788888988866


Q ss_pred             EEEeeC-CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEE-EeCCCcEEEEECCCCeEEEEec----CC
Q psy2671         265 VSGCKN-GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS-SGKDGAIRIWDVILSQCVRVLT----SH  338 (573)
Q Consensus       265 ~sgs~d-g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~~~----~h  338 (573)
                      +..-.| +.|.+-|....+.+...............|.|     ++++++. ...+..|-++|..+++.+..+.    .|
T Consensus       143 Vv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dp-----dgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~  217 (369)
T PF02239_consen  143 VVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDP-----DGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPH  217 (369)
T ss_dssp             EEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-T-----TSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBE
T ss_pred             EEEEccCCeEEEEEeccccccceeeecccccccccccCc-----ccceeeecccccceeEEEeeccceEEEEeecccccc
Confidence            666554 78877787655432211111222344455544     6677655 4556789999999887766543    23


Q ss_pred             CccEEEEEECCCcEEEEEeCCC----------eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         339 TRSVTCIRWGGSGLIYSASQDR----------TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       339 ~~~v~~~~~~~~~~l~s~s~d~----------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                      ..+...+--...|.++.-+.++          .+.+|+..+-+.++++......                          
T Consensus       218 ~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g--------------------------  271 (369)
T PF02239_consen  218 PGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG--------------------------  271 (369)
T ss_dssp             ETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS--------------------------
T ss_pred             ccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc--------------------------
Confidence            3344433322233322222111          2223443333333333221111                          


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEE----eCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEEEeeC--C
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSG----SDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASASF--D  481 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg----~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~s~--d  481 (573)
                                  .+...+|++.++...    ....+|.++|.++... ...+. +....+..+.|++||+.+..+..  +
T Consensus       272 ------------lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~-~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~  338 (369)
T PF02239_consen  272 ------------LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKV-VKTITPGPGKRVVHMEFNPDGKEVWVSVWDGN  338 (369)
T ss_dssp             --------------EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEE-EE-HHHHHT--EEEEEE-TTSSEEEEEEE--T
T ss_pred             ------------ceeecCCCCccEEeeccCCCCCceEEEEECcCcce-eEEEeccCCCcEeccEECCCCCEEEEEEecCC
Confidence                        122335778888776    4558999999887532 22322 22234889999999997666544  3


Q ss_pred             CcEEEEeCCCCeEEEeec
Q psy2671         482 KSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~  499 (573)
                      +.|.+||..+.+.+..+.
T Consensus       339 ~~i~v~D~~Tl~~~~~i~  356 (369)
T PF02239_consen  339 GAIVVYDAKTLKEKKRIP  356 (369)
T ss_dssp             TEEEEEETTTTEEEEEEE
T ss_pred             CEEEEEECCCcEEEEEEE
Confidence            469999999999887765

...

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.58  E-value=6.4e-12  Score=118.66  Aligned_cols=343  Identities=20%  Similarity=0.274  Sum_probs=206.8

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -.-++..+.+||.|.+|++...- .|.+|+......+..                                         
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~-----------------------------------------   68 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVR-----------------------------------------   68 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheee-----------------------------------------
Confidence            44578889999999999986553 488998654422110                                         


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC---------------CeEEEEECCCCeeeEEecCCCCc--
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD---------------TTVRFWDVTTQTPLFKCEGHKHW--  251 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d---------------~~i~iwd~~~~~~~~~~~~h~~~--  251 (573)
                                     .-| ..|.-+.|||.+++|.+=+..               ..+.+||..++..++.+.+...+  
T Consensus        69 ---------------~~~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~  132 (561)
T COG5354          69 ---------------FRH-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYL  132 (561)
T ss_pred             ---------------eec-CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCccc
Confidence                           012 347778899999988875533               35999999999988887766554  


Q ss_pred             EE-EEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCC-cccEEEEEecccccCCCCCEEEE-----EeCCCcEEEE
Q psy2671         252 VL-CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGH-KQWITALSWEPFHLNHQCRRFAS-----SGKDGAIRIW  324 (573)
Q Consensus       252 V~-~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~l~s-----~~~dg~v~iw  324 (573)
                      .. -+.|+.+..++|-- ....+.++++ ++.....++..- ...|....|+|..   +...|+.     .+.++.+++|
T Consensus       133 ~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~---n~~~la~~tPEk~~kpa~~~i~  207 (561)
T COG5354         133 GWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEG---NHDELAYWTPEKLNKPAMVRIL  207 (561)
T ss_pred             ccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeEEecCCC---CCceEEEEccccCCCCcEEEEE
Confidence            33 57899888876644 3456889987 333221111111 2456666676642   2233442     5778899999


Q ss_pred             ECCCCeEEEEecCCCccEEEEEECCCcEEEEEe------------CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCc
Q psy2671         325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS------------QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY  392 (573)
Q Consensus       325 d~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s------------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~  392 (573)
                      .+..+..+.+.......=..+.|...|..+..-            ....+.++++.... +....+-.+.|..+++.   
T Consensus       208 sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~-i~V~~~~~~pVhdf~W~---  283 (561)
T COG5354         208 SIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS-IPVEKDLKDPVHDFTWE---  283 (561)
T ss_pred             EccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccc-cceeccccccceeeeec---
Confidence            998766555433323333456666555211110            01223333332111 10000112233333332   


Q ss_pred             eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE--EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC
Q psy2671         393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV--SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP  470 (573)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp  470 (573)
                                                        |.++.++  +|-.+-++-++|++...    +....+..=+.+.|||
T Consensus       284 ----------------------------------p~S~~F~vi~g~~pa~~s~~~lr~Nl----~~~~Pe~~rNT~~fsp  325 (561)
T COG5354         284 ----------------------------------PLSSRFAVISGYMPASVSVFDLRGNL----RFYFPEQKRNTIFFSP  325 (561)
T ss_pred             ----------------------------------ccCCceeEEecccccceeecccccce----EEecCCcccccccccC
Confidence                                              4444444  44467778888876541    1222333446789999


Q ss_pred             CCCEEEEeeCC---CcEEEEeCCCCeE-EEeecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeCCcccccccc
Q psy2671         471 DGRIIASASFD---KSIKLWDGRIGKF-ITTLRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       471 ~g~~las~s~d---g~i~lwd~~~~~~-~~~~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~~~~~~~~~l  540 (573)
                      .+++++.++.|   |.+-+||...... +..+.+-.  ..-+.||||++++.+...      |+.|+||++...+.-   
T Consensus       326 ~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n--~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f---  400 (561)
T COG5354         326 HERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLN--TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF---  400 (561)
T ss_pred             cccEEEEecCCccccceEEeccCCceEEEEEeecCC--ceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh---
Confidence            99999998876   6799999765433 33555543  345689999999887643      788999999664432   


Q ss_pred             cCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         541 PGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       541 ~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                           ..+.+.|-|.+++..+.+.+.
T Consensus       401 -----el~~~~W~p~~~~~ttsSs~~  421 (561)
T COG5354         401 -----ELTNITWDPSGQYVTTSSSCP  421 (561)
T ss_pred             -----hhhhccccCCcccceeeccCC
Confidence                 456678888877766655543

>KOG3881|consensus

Probab=99.58  E-value=5.2e-13  Score=121.86  Aligned_cols=215  Identities=13%  Similarity=0.211  Sum_probs=152.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCe----EEEEecCCCccEEEEEECC--CcEEEEEeCC--CeEEEEeCCCCeeeEeccCCcc
Q psy2671         310 RRFASSGKDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWGG--SGLIYSASQD--RTIKVWRASDGVMCRTLEGHAH  381 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~--~~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~~~  381 (573)
                      ..|++|-.+|.+.+|....+.    ....+..+ ..+..+.-.+  .+.+++|+..  ..+++||+...+.  .+++..-
T Consensus       116 g~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~q--iw~aKNv  192 (412)
T KOG3881|consen  116 GTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQ--IWSAKNV  192 (412)
T ss_pred             CEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeeccccee--eeeccCC
Confidence            468888999999999987432    12222222 2233333322  3467789988  8899999987633  3332211


Q ss_pred             eeeEEEeccCce-eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC--CcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         382 WVNTLALSTDYL-MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE--GEKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       382 ~v~~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                      .       .|.. +++.... ..+.                   +-+.  ...+|++..-+.+|+||++.++.++..+.-
T Consensus       193 p-------nD~L~LrVPvW~-tdi~-------------------Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~  245 (412)
T KOG3881|consen  193 P-------NDRLGLRVPVWI-TDIR-------------------FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDF  245 (412)
T ss_pred             C-------Cccccceeeeee-ccce-------------------ecCCCCCceEEEEecceeEEEecCcccCcceeEecc
Confidence            1       1110 0000000 0000                   1122  568999999999999999999998888877


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                      -..+++++...|+|++|.+|..-|.+..+|.+.++.+.. +++-.+.+.++..+|..++||++|-|..|||+|+++.+++
T Consensus       246 ~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll  325 (412)
T KOG3881|consen  246 LENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLL  325 (412)
T ss_pred             ccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhh
Confidence            788899999999999999999999999999999998877 8888899999999999999999999999999999997765


Q ss_pred             ccccCcCCCEEEEEEccC
Q psy2671         538 QDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       538 ~~l~~h~~~v~~~~~s~d  555 (573)
                      .... -...++++-+.++
T Consensus       326 ~kvY-vKs~lt~il~~~~  342 (412)
T KOG3881|consen  326 HKVY-VKSRLTFILLRDD  342 (412)
T ss_pred             hhhh-hhccccEEEecCC
Confidence            4322 1234556666543

>KOG4497|consensus

Probab=99.57  E-value=1.9e-12  Score=115.43  Aligned_cols=297  Identities=18%  Similarity=0.280  Sum_probs=184.9

Q ss_pred             EEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       255 v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      ..|||+|+++|+.++- .+.+=|.++-+.. +.+ .--+.|..+.|...    ..-.+.....|+.|.+|++...+-...
T Consensus        14 c~fSp~g~yiAs~~~y-rlviRd~~tlq~~-qlf-~cldki~yieW~ad----s~~ilC~~yk~~~vqvwsl~Qpew~ck   86 (447)
T KOG4497|consen   14 CSFSPCGNYIASLSRY-RLVIRDSETLQLH-QLF-LCLDKIVYIEWKAD----SCHILCVAYKDPKVQVWSLVQPEWYCK   86 (447)
T ss_pred             eeECCCCCeeeeeeee-EEEEeccchhhHH-HHH-HHHHHhhheeeecc----ceeeeeeeeccceEEEEEeecceeEEE
Confidence            5799999999998876 5666666553321 110 01233555555421    223455668899999999998888888


Q ss_pred             ecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         335 LTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                      +.....++.++.|+|+|  .+.+...|-.|.+|.+.+...... +--..-+..+++++++.+........-..|.... .
T Consensus        87 Ideg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~-~  164 (447)
T KOG4497|consen   87 IDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS-S  164 (447)
T ss_pred             eccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHH-h
Confidence            88888999999999998  467788899999999987654321 1112234667788777654433221100000000 0


Q ss_pred             hhhhhhhhhe---------eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc
Q psy2671         413 ESSKHALAKY---------QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS  483 (573)
Q Consensus       413 ~~~~~~~~~~---------~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~  483 (573)
                      ......+..+         ...+|+|..         +.+||.--.-+.+.  ....-.+..++|+|.+++|++|++|+.
T Consensus       165 c~~W~ll~~f~~dT~DltgieWsPdg~~---------laVwd~~Leykv~a--Ye~~lG~k~v~wsP~~qflavGsyD~~  233 (447)
T KOG4497|consen  165 CKAWILLKEFKLDTIDLTGIEWSPDGNW---------LAVWDNVLEYKVYA--YERGLGLKFVEWSPCNQFLAVGSYDQM  233 (447)
T ss_pred             hHHHHHHHhcCCCcccccCceECCCCcE---------EEEecchhhheeee--eeeccceeEEEeccccceEEeeccchh
Confidence            0000000000         123465554         44566322111111  111234788999999999999999999


Q ss_pred             EEEEeCCCCe------------------------------------------------------------EEEeec----
Q psy2671         484 IKLWDGRIGK------------------------------------------------------------FITTLR----  499 (573)
Q Consensus       484 i~lwd~~~~~------------------------------------------------------------~~~~~~----  499 (573)
                      +|+.+--+.+                                                            .+..++    
T Consensus       234 lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD  313 (447)
T KOG4497|consen  234 LRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTD  313 (447)
T ss_pred             hhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCC
Confidence            8886421110                                                            001111    


Q ss_pred             --CCcceEEEEEECCCCCEEEEEeC--CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         500 --GHVQAVYMVAWSSDSRLLVSGSA--DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       500 --~h~~~v~~v~~s~dg~~las~s~--D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                        .....+..++||+|..++||-..  -+.+-+||++..+....+. ...+|.+..|.|....|+.+.....+++|.
T Consensus       314 ~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~  389 (447)
T KOG4497|consen  314 FPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWA  389 (447)
T ss_pred             CCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEc
Confidence              11234667999999999988643  3579999999877655543 345899999999988888888788899985

>KOG1523|consensus

Probab=99.54  E-value=6.2e-13  Score=118.19  Aligned_cols=232  Identities=16%  Similarity=0.303  Sum_probs=164.8

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      ..+|+|.+|++|+..+|.+.....|.||.....   ++.+++..|...|++|+|+|.+++|++++.|..-+||....+..
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~   89 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT   89 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence            468999999999999999999999999997764   46788999999999999999999999999999999999844432


Q ss_pred             ec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEEecCCCccEEEEEECCCc-EEEEE
Q psy2671         284 IG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRVLTSHTRSVTCIRWGGSG-LIYSA  356 (573)
Q Consensus       284 ~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~~-~l~s~  356 (573)
                      -.  ..+..+....+++.|.|     .++.|++||....|-+|-.+....    ..+-..+...|+++.|.+++ +++.|
T Consensus        90 WkptlvLlRiNrAAt~V~WsP-----~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG  164 (361)
T KOG1523|consen   90 WKPTLVLLRINRAATCVKWSP-----KENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG  164 (361)
T ss_pred             eccceeEEEeccceeeEeecC-----cCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence            11  12445778899999988     457899999999999887654321    11223466789999999998 57788


Q ss_pred             eCCCeEEEEeCCC------------------CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         357 SQDRTIKVWRASD------------------GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       357 s~d~~i~vw~~~~------------------~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      +.|+..|+|..--                  |.+...+.....|+..                                 
T Consensus       165 s~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~---------------------------------  211 (361)
T KOG1523|consen  165 STDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHG---------------------------------  211 (361)
T ss_pred             ccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceee---------------------------------
Confidence            9999999986310                  0000011111112222                                 


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                          ..++|.|..|+=.+.|.++.+=|.....+.......-.-+..++.|-.+.. ++.+++|
T Consensus       212 ----v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~-vv~ag~~  269 (361)
T KOG1523|consen  212 ----VLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENS-VVAAGYD  269 (361)
T ss_pred             ----eEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCCc-eeecCCC
Confidence                234577899999999999998887665433332222235566677655543 4445555

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=5.8e-12  Score=126.75  Aligned_cols=235  Identities=17%  Similarity=0.198  Sum_probs=142.6

Q ss_pred             CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee---CCeEEEEECCCCceecccccCCcccEEEEEeccccc
Q psy2671         229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK---NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       229 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~  305 (573)
                      ..|.+||...... ..+..+...+.+.+|||||+.|+..+.   +..+.+|++.+|+...  +......+....|+|   
T Consensus       179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~--l~~~~~~~~~~~~SP---  252 (429)
T PRK03629        179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ--VASFPRHNGAPAFSP---  252 (429)
T ss_pred             eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE--ccCCCCCcCCeEECC---
Confidence            4789999876543 333445667899999999999986543   3579999998875321  111222233456655   


Q ss_pred             CCCCCEEEEE-eCCC--cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC-CCeEEEEeCCCCeeeEeccCCc
Q psy2671         306 NHQCRRFASS-GKDG--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ-DRTIKVWRASDGVMCRTLEGHA  380 (573)
Q Consensus       306 ~~~~~~l~s~-~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~-d~~i~vw~~~~~~~~~~~~~~~  380 (573)
                        +++.++.. +.+|  .|.+||+.+++..+ +..+...+....|++++ .|+..+. ++...+|               
T Consensus       253 --DG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy---------------  314 (429)
T PRK03629        253 --DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVY---------------  314 (429)
T ss_pred             --CCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEE---------------
Confidence              66766644 4444  47777876655433 22233344556666655 2322222 2222332               


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ  460 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~  460 (573)
                                                                                    ++|+.++.  ...+..+.
T Consensus       315 --------------------------------------------------------------~~d~~~g~--~~~lt~~~  330 (429)
T PRK03629        315 --------------------------------------------------------------KVNINGGA--PQRITWEG  330 (429)
T ss_pred             --------------------------------------------------------------EEECCCCC--eEEeecCC
Confidence                                                                          22222211  11111122


Q ss_pred             ccEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCc---EEEEeCCcc
Q psy2671         461 QLINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADST---LKVWNMKTK  534 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~---v~vwd~~~~  534 (573)
                      .......|+|||+.|+..+.+   ..|.+||..+++.. .+... .......|+|||++|+.++.++.   +.++++ .+
T Consensus       331 ~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G  407 (429)
T PRK03629        331 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DG  407 (429)
T ss_pred             CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CC
Confidence            234567899999999876543   35888998887643 33321 12346789999999999888765   667777 45


Q ss_pred             cccccccCcCCCEEEEEEcc
Q psy2671         535 KIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~  554 (573)
                      +..+.+.+|.+.+...+|+|
T Consensus       408 ~~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        408 RFKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             CCeEECccCCCCcCCcccCC
Confidence            55667888888899999997

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.53  E-value=6e-13  Score=117.73  Aligned_cols=108  Identities=30%  Similarity=0.606  Sum_probs=87.8

Q ss_pred             cccEEEEEECCCCCEEEE--eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcc
Q psy2671         460 QQLINCVEFSPDGRIIAS--ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTK  534 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las--~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~  534 (573)
                      ..+|.+++|+|+|+.+|+  |..++.|.+||.+ ++.+..+.  ...++.+.|||+|++||+++.+   |.|.+||+++.
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~  135 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK  135 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            346999999999998765  4467899999997 66666664  3567889999999999998754   56999999988


Q ss_pred             cccccccCcCCCEEEEEEccCCCEEEEeeC------CCcEEEcc
Q psy2671         535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGK------DKVLRLWQ  572 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~------d~~i~iw~  572 (573)
                      +.+.... | ..+..++|||||++|+++..      |..++||+
T Consensus       136 ~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~  177 (194)
T PF08662_consen  136 KKISTFE-H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWS  177 (194)
T ss_pred             EEeeccc-c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence            8877665 3 34789999999999998875      67789986

>KOG1272|consensus

Probab=99.52  E-value=5.7e-14  Score=130.60  Aligned_cols=261  Identities=18%  Similarity=0.332  Sum_probs=180.2

Q ss_pred             EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccC
Q psy2671         211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG  290 (573)
Q Consensus       211 ~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~  290 (573)
                      ..+.|+.+|++|+.|+..|.+..+|+.++...+.+.- ...|..+.|-.+.+++|++ ....+.+||-..- .+. -++.
T Consensus       133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~Gt-ElH-Clk~  208 (545)
T KOG1272|consen  133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVA-QKKYVYVYDNNGT-ELH-CLKR  208 (545)
T ss_pred             eeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhh-hhceEEEecCCCc-EEe-ehhh
Confidence            5678999999999999999999999999887766543 3458889998888777665 5567899986432 221 1111


Q ss_pred             CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC
Q psy2671         291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG  370 (573)
Q Consensus       291 h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~  370 (573)
                       ...|..+.|-|+|+     +|++++..|.++.-|+.+++.+..+..-.+.+..++-+                      
T Consensus       209 -~~~v~rLeFLPyHf-----LL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qN----------------------  260 (545)
T KOG1272|consen  209 -HIRVARLEFLPYHF-----LLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQN----------------------  260 (545)
T ss_pred             -cCchhhhcccchhh-----eeeecccCCceEEEeechhhhhHHHHccCCccchhhcC----------------------
Confidence             23577888889875     68899999999999988887665544333333222222                      


Q ss_pred             eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       371 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                                                                              |-...+-.|...|+|-+|.+.. +
T Consensus       261 --------------------------------------------------------P~NaVih~GhsnGtVSlWSP~s-k  283 (545)
T KOG1272|consen  261 --------------------------------------------------------PYNAVIHLGHSNGTVSLWSPNS-K  283 (545)
T ss_pred             --------------------------------------------------------CccceEEEcCCCceEEecCCCC-c
Confidence                                                                    3344555666777777787654 3


Q ss_pred             cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       451 ~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      .++..+.-|.++|.+|++.++|+++||++.|..++|||++....+.++.. .-+...+++|..| +||. |....|.||.
T Consensus       284 ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg-lLA~-~~G~~v~iw~  360 (545)
T KOG1272|consen  284 EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG-LLAL-SYGDHVQIWK  360 (545)
T ss_pred             chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc-ceee-ecCCeeeeeh
Confidence            44556667999999999999999999999999999999998776666554 2356677888655 4443 3445799995


Q ss_pred             CC-c--ccccccccCc--CCCEEEEEEccCCCEEEEee
Q psy2671         531 MK-T--KKIEQDLPGH--GDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       531 ~~-~--~~~~~~l~~h--~~~v~~~~~s~d~~~l~s~~  563 (573)
                      =. .  +.....+..|  .+.|..+.|-|-...|-.|.
T Consensus       361 d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH  398 (545)
T KOG1272|consen  361 DALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGH  398 (545)
T ss_pred             hhhcCCCCCCcchhhhccCcccccceeccHHHeeeccc
Confidence            21 1  1111111122  24788888888655554443

>KOG2315|consensus

Probab=99.52  E-value=6.3e-11  Score=113.48  Aligned_cols=336  Identities=20%  Similarity=0.300  Sum_probs=195.7

Q ss_pred             cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEecee
Q psy2671         110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA  189 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (573)
                      ..+....++|++|+++|-+ .+..|+|.+..+...+...                                         
T Consensus        34 ~~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~lt~-----------------------------------------   71 (566)
T KOG2315|consen   34 SRPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVLCV-----------------------------------------   71 (566)
T ss_pred             CCcceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEEEe-----------------------------------------
Confidence            3346778899999988875 4567899987665322110                                         


Q ss_pred             eEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEE-----eCC-----CeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG-----SGD-----TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       190 ~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~-----s~d-----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                      -...+.++.|||-|.+|.+=     ..+     -.+++|++.++.....+......-++..|++
T Consensus        72 ----------------~~~~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~  135 (566)
T KOG2315|consen   72 ----------------ELKKTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSI  135 (566)
T ss_pred             ----------------ccceeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCccccccc
Confidence                            01146788899988887642     222     3577999998655444332221114788998


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEE-----EeCCCcEEEEECCCCeEEEE
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS-----SGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s-----~~~dg~v~iwd~~~~~~~~~  334 (573)
                      |..+ +.=-..+.+++|+....+.+..  +-|...|+.+..+|-.   ....+++     .|.-+.||||..........
T Consensus       136 dEsl-~arlv~nev~f~~~~~f~~~~~--kl~~~~i~~f~lSpgp---~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~  209 (566)
T KOG2315|consen  136 DESL-AARLVSNEVQFYDLGSFKTIQH--KLSVSGITMLSLSPGP---EPPFVAVYVPEKKGAPASVRIYKYPEEGQHQP  209 (566)
T ss_pred             chhh-hhhhhcceEEEEecCCccceee--eeeccceeeEEecCCC---CCceEEEEccCCCCCCcEEEEeccccccccch
Confidence            8763 2223346799999877544322  2345556666665531   1122332     45667799998763222111


Q ss_pred             ec---CCCccEEEEEECCCc--EEEEEe--CCC---------eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEE
Q psy2671         335 LT---SHTRSVTCIRWGGSG--LIYSAS--QDR---------TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       335 ~~---~h~~~v~~~~~~~~~--~l~s~s--~d~---------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      +.   -....-..+.|+..+  +|+.++  -|.         ++.+.+.........+ ...++|.++.++         
T Consensus       210 ~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~---------  279 (566)
T KOG2315|consen  210 VANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWS---------  279 (566)
T ss_pred             hhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCCceEEEEC---------
Confidence            11   111222345676443  333332  233         3444443311111111 113344555444         


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE--EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEE
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV--SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA  476 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la  476 (573)
                                                  |.+..++  -|-.--.+-++|++..  ++..+  .+++=+++-|+|.|++|+
T Consensus       280 ----------------------------~s~~EF~VvyGfMPAkvtifnlr~~--~v~df--~egpRN~~~fnp~g~ii~  327 (566)
T KOG2315|consen  280 ----------------------------PSGREFAVVYGFMPAKVTIFNLRGK--PVFDF--PEGPRNTAFFNPHGNIIL  327 (566)
T ss_pred             ----------------------------CCCCEEEEEEecccceEEEEcCCCC--EeEeC--CCCCccceEECCCCCEEE
Confidence                                        3343332  3344556778887532  22222  244567899999999999


Q ss_pred             EeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeCCcccccccccCcCCCE
Q psy2671         477 SASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNMKTKKIEQDLPGHGDEV  547 (573)
Q Consensus       477 s~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~~~~~~~~~l~~h~~~v  547 (573)
                      .+|.+   |.|-+||+.+.+++..+..-.  -+-++|+|||++++|+..      |+.++||+...........  ..+.
T Consensus       328 lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~~~f--~sEL  403 (566)
T KOG2315|consen  328 LAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHEKMF--KSEL  403 (566)
T ss_pred             EeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeehhhh--hHhH
Confidence            98875   789999999988888887643  345799999999998865      7889999986544322111  1156


Q ss_pred             EEEEEccC
Q psy2671         548 YAVDWAPD  555 (573)
Q Consensus       548 ~~~~~s~d  555 (573)
                      +.+.|-|-
T Consensus       404 ~qv~W~P~  411 (566)
T KOG2315|consen  404 LQVEWRPF  411 (566)
T ss_pred             hheeeeec
Confidence            77777753

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=3.1e-12  Score=128.88  Aligned_cols=237  Identities=21%  Similarity=0.266  Sum_probs=140.4

Q ss_pred             CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                      ...|.++|... .....+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++...  +......+....|+|  
T Consensus       175 ~~~L~~~D~dG-~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~--l~~~~g~~~~~~~SP--  249 (427)
T PRK02889        175 RYQLQISDADG-QNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV--VANFKGSNSAPAWSP--  249 (427)
T ss_pred             ccEEEEECCCC-CCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE--eecCCCCccceEECC--
Confidence            35677888744 3334455677789999999999999877643   469999998886432  222233445666765  


Q ss_pred             cCCCCCEEE-EEeCCCcEEEEEC--CCCeEEEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCC
Q psy2671         305 LNHQCRRFA-SSGKDGAIRIWDV--ILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       305 ~~~~~~~l~-s~~~dg~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~  379 (573)
                         +++.++ +.+.+|..++|.+  ..+. .+.+..+........|+++| .++..+ .++...+|.+            
T Consensus       250 ---DG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~------------  313 (427)
T PRK02889        250 ---DGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRM------------  313 (427)
T ss_pred             ---CCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEE------------
Confidence               566665 5667777666654  3222 33344444334455566655 232222 2333333332            


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH  459 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h  459 (573)
                                                                                       +...+.  ...+..+
T Consensus       314 -----------------------------------------------------------------~~~~g~--~~~lt~~  326 (427)
T PRK02889        314 -----------------------------------------------------------------PASGGA--AQRVTFT  326 (427)
T ss_pred             -----------------------------------------------------------------ECCCCc--eEEEecC
Confidence                                                                             111111  1111111


Q ss_pred             cccEEEEEECCCCCEEEEeeCCC---cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCCc
Q psy2671         460 QQLINCVEFSPDGRIIASASFDK---SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMKT  533 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~dg---~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~~  533 (573)
                      .......+|||||+.|+..+.++   .|.+||..+++......+  .......|+|||+.|+.++.++   .+.+.++ .
T Consensus       327 g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~  403 (427)
T PRK02889        327 GSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALTDT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSS-D  403 (427)
T ss_pred             CCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEccCC--CCccCceECCCCCEEEEEEecCCCEEEEEEEC-C
Confidence            11123468999999999776554   599999988764432222  2345779999999988777544   2455555 3


Q ss_pred             ccccccccCcCCCEEEEEEccC
Q psy2671         534 KKIEQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       534 ~~~~~~l~~h~~~v~~~~~s~d  555 (573)
                      ++....+..+.+.+...+|+|-
T Consensus       404 g~~~~~l~~~~g~~~~p~wsp~  425 (427)
T PRK02889        404 GRIKQRLSVQGGDVREPSWGPF  425 (427)
T ss_pred             CCceEEeecCCCCCCCCccCCC
Confidence            4555556666677888889874

>KOG1272|consensus

Probab=99.51  E-value=1.4e-13  Score=127.99  Aligned_cols=269  Identities=19%  Similarity=0.268  Sum_probs=189.5

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      -..+.++.+|++|+-|+.-|.|-..|..++...+++.                                           
T Consensus       132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-------------------------------------------  168 (545)
T KOG1272|consen  132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-------------------------------------------  168 (545)
T ss_pred             CeeeeecCCccEEEecCCccceeeeecccceeeeeee-------------------------------------------
Confidence            3567889999999999999999999999886554321                                           


Q ss_pred             EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                                   -...|.++.|--+.+++|.+ ....+.||| ..|..++.++.|. .|..+.|-|---.|++++..|.
T Consensus       169 -------------v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD-~~GtElHClk~~~-~v~rLeFLPyHfLL~~~~~~G~  232 (545)
T KOG1272|consen  169 -------------VMETVRDVTFLHNEQFFAVA-QKKYVYVYD-NNGTELHCLKRHI-RVARLEFLPYHFLLVAASEAGF  232 (545)
T ss_pred             -------------hhhhhhhhhhhcchHHHHhh-hhceEEEec-CCCcEEeehhhcC-chhhhcccchhheeeecccCCc
Confidence                         12456677777677777766 677899999 4577888887764 5889999998888999999999


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-  351 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-  351 (573)
                      ++.-|+.+|+.+.. +..-.+.+..++-+|.     ...+-+|...|+|.+|......++..+..|.++|.++++.++| 
T Consensus       233 L~Y~DVS~GklVa~-~~t~~G~~~vm~qNP~-----NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~  306 (545)
T KOG1272|consen  233 LKYQDVSTGKLVAS-IRTGAGRTDVMKQNPY-----NAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGR  306 (545)
T ss_pred             eEEEeechhhhhHH-HHccCCccchhhcCCc-----cceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCc
Confidence            99999999987643 2233344555555553     2457788999999999999999988899999999999999888 


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                      +++|.+.|+.++|||++.-..+.++.. ......+++|                                       ..-
T Consensus       307 YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~S---------------------------------------qkg  346 (545)
T KOG1272|consen  307 YMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLS---------------------------------------QKG  346 (545)
T ss_pred             EEeecccccceeEeeeccccccceeec-CCCccccccc---------------------------------------ccc
Confidence            789999999999999987654433322 1122222222                                       223


Q ss_pred             EEEEeCCCeEEEEcCCCC-c-cceeeecc--ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         432 LVSGSDDFTLFLWNPEKE-K-KSLARMTG--HQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~-~-~~~~~~~~--h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                      +++.+..-.+.+|.-... . ..-.....  ....|..+.|.|-...|-.|...|--.+
T Consensus       347 lLA~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsi  405 (545)
T KOG1272|consen  347 LLALSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSI  405 (545)
T ss_pred             ceeeecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeE
Confidence            445555566788842211 0 00000111  1236888999997667766665554333

>KOG0974|consensus

Probab=99.50  E-value=7.1e-12  Score=128.19  Aligned_cols=202  Identities=19%  Similarity=0.271  Sum_probs=156.5

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -.+||....+.-+...++.+..++.+-+||...+..+.+........                                 
T Consensus        86 ~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~---------------------------------  132 (967)
T KOG0974|consen   86 FSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCT---------------------------------  132 (967)
T ss_pred             ccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEE---------------------------------
Confidence            46778777777788889999999999999987765543322111000                                 


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                        .....-+-++++.-++++|+.-+.|.+|+.........+.||.+.+.++.|+.||.++++.|
T Consensus       133 ------------------l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~S  194 (967)
T KOG0974|consen  133 ------------------LYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVS  194 (967)
T ss_pred             ------------------EEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEe
Confidence                              00112234567777899999999999999874333346899999999999999999999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccEEEEEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSVTCIRW  347 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~  347 (573)
                      +|.++++|++++++......-+|+..|..+++.|.       +++|++.|-+.|+|+....+ ...+.+|. +.|..++.
T Consensus       195 dDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-------~i~t~gedctcrvW~~~~~~-l~~y~~h~g~~iw~~~~  266 (967)
T KOG0974|consen  195 DDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-------RIITVGEDCTCRVWGVNGTQ-LEVYDEHSGKGIWKIAV  266 (967)
T ss_pred             cCcceeeeecccccccCcccccccceeEEEEeccc-------eeEEeccceEEEEEecccce-ehhhhhhhhcceeEEEE
Confidence            99999999999988776567799999999998763       79999999999999764433 33566665 46788888


Q ss_pred             CCCc-EEEEEeCCCeEEEEeCCC
Q psy2671         348 GGSG-LIYSASQDRTIKVWRASD  369 (573)
Q Consensus       348 ~~~~-~l~s~s~d~~i~vw~~~~  369 (573)
                      ..+. .++|++.|+.+++|+...
T Consensus       267 ~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  267 PIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             cCCceEEEeeccCcchhhhhhhc
Confidence            7665 689999999999999754

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=5.1e-12  Score=127.81  Aligned_cols=235  Identities=23%  Similarity=0.260  Sum_probs=139.3

Q ss_pred             CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEeccccc
Q psy2671         229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       229 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~  305 (573)
                      .+|.+||..... ...+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++..  .+........+..|+|   
T Consensus       184 ~~l~i~D~~g~~-~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~--~l~~~~g~~~~~~~Sp---  257 (433)
T PRK04922        184 YALQVADSDGYN-PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE--LVASFRGINGAPSFSP---  257 (433)
T ss_pred             EEEEEECCCCCC-ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE--EeccCCCCccCceECC---
Confidence            479999986543 34455667788999999999999987643   47999999887643  1222233333455554   


Q ss_pred             CCCCCEEE-EEeCCC--cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCc
Q psy2671         306 NHQCRRFA-SSGKDG--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHA  380 (573)
Q Consensus       306 ~~~~~~l~-s~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~  380 (573)
                        +++.++ +.+.+|  .|.+||+.+++. ..+..+........|++++ .++..+ .++...                 
T Consensus       258 --DG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~-----------------  317 (433)
T PRK04922        258 --DGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQ-----------------  317 (433)
T ss_pred             --CCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCce-----------------
Confidence              566554 444444  477777766543 2333333333445555554 222222 222211                 


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ  460 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~  460 (573)
                                                                                  ++++++.++.  ...+..+.
T Consensus       318 ------------------------------------------------------------iy~~dl~~g~--~~~lt~~g  335 (433)
T PRK04922        318 ------------------------------------------------------------IYRVAASGGS--AERLTFQG  335 (433)
T ss_pred             ------------------------------------------------------------EEEEECCCCC--eEEeecCC
Confidence                                                                        3333332221  11111111


Q ss_pred             ccEEEEEECCCCCEEEEeeCCC---cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcc
Q psy2671         461 QLINCVEFSPDGRIIASASFDK---SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTK  534 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s~dg---~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~  534 (573)
                      .....++|||||+.|+..+.++   .|.+||..+++.. .+. +........|+|||++|+..+.+   +.+.++++.. 
T Consensus       336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g-  412 (433)
T PRK04922        336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG-  412 (433)
T ss_pred             CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC-
Confidence            2234679999999998765443   5999999887654 332 22234567899999988876653   3577888754 


Q ss_pred             cccccccCcCCCEEEEEEcc
Q psy2671         535 KIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~  554 (573)
                      ...+.+..+.+.+...+|+|
T Consensus       413 ~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        413 RVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             CceEEcccCCCCCCCCccCC
Confidence            34455655666777888887

>KOG1354|consensus

Probab=99.47  E-value=5.1e-11  Score=107.14  Aligned_cols=318  Identities=22%  Similarity=0.323  Sum_probs=190.1

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----eeEEecCCC------------CcEEEEEEcCCCC--eEEEE
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLFKCEGHK------------HWVLCIAWSPDSK--QLVSG  267 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----~~~~~~~h~------------~~V~~v~~s~dg~--~l~sg  267 (573)
                      .+-|.++.|.-+|.+||+|..+|.|.++.-....     ....++.|.            ..|..+.|.++++  .++..
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls  104 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS  104 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence            4678899999999999999999999999643221     111233343            2478889988765  56778


Q ss_pred             eeCCeEEEEECCCCceecc----cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCccE
Q psy2671         268 CKNGVIHAWDSSTGKQIGQ----PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRSV  342 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v  342 (573)
                      +.|.+|++|.+........    +..+....++++...           +.+..|-.+      ...+.+.. ..|+-.|
T Consensus       105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p-----------~~~~~~~~v------ea~prRv~aNaHtyhi  167 (433)
T KOG1354|consen  105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLP-----------VEGRHDLEV------EASPRRVYANAHTYHI  167 (433)
T ss_pred             cCCcceeeeeeeccccccccccccccCCCCccceeece-----------eecccccee------eeeeeeeccccceeEe
Confidence            8999999998864322110    111112222322211           000001000      11233333 3688999


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      .++.++.++..+..+.|-.|.+|++.--....         +-+.                  ..|.+.+....  ....
T Consensus       168 NSIS~NsD~Et~lSADdLRINLWnlei~d~sF---------nIVD------------------IKP~nmEeLte--VITs  218 (433)
T KOG1354|consen  168 NSISVNSDKETFLSADDLRINLWNLEIIDQSF---------NIVD------------------IKPANMEELTE--VITS  218 (433)
T ss_pred             eeeeecCccceEeeccceeeeeccccccCCce---------eEEE------------------ccccCHHHHHH--HHhh
Confidence            99999999887888899999999975211100         0000                  11111111100  0000


Q ss_pred             eeeCC-CCcEEEEEeCCCeEEEEcCCCCcccee---------------eeccccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         423 QAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLA---------------RMTGHQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       423 ~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~---------------~~~~h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                      ..++| ....++-.+..|+|++-|++....+..               .+.+--..|..+.|+++|+++++-++ -+|++
T Consensus       219 aEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~  297 (433)
T KOG1354|consen  219 AEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKL  297 (433)
T ss_pred             hccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEE
Confidence            11122 245778888899999999874321110               01112235788999999999998765 58999


Q ss_pred             EeC-CCCeEEEeecCCc------------ceE---EEEEECCCCCEEEEEeCCCcEEEEeCCccccc-------------
Q psy2671         487 WDG-RIGKFITTLRGHV------------QAV---YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-------------  537 (573)
Q Consensus       487 wd~-~~~~~~~~~~~h~------------~~v---~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-------------  537 (573)
                      ||+ ...+.+.+.+-|.            ..|   ..++||.++.+++|||..+.+++|+...+...             
T Consensus       298 wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~  377 (433)
T KOG1354|consen  298 WDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKP  377 (433)
T ss_pred             EeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCcceeecccccccCCcc
Confidence            998 4455666655552            122   45799999999999999999999995433110             


Q ss_pred             -------cccc-C-------------cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         538 -------QDLP-G-------------HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       538 -------~~l~-~-------------h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                             .... |             ....+...+|+|..+.+|.+... .++||.
T Consensus       378 ~~~~k~~~V~~~g~r~~~~~~vd~ldf~kkilh~aWhp~en~ia~aatn-nlyif~  432 (433)
T KOG1354|consen  378 RKVLKLRLVSSSGKRKRDEISVDALDFRKKILHTAWHPKENSIAVAATN-NLYIFQ  432 (433)
T ss_pred             cccccceeeecCCCccccccccchhhhhhHHHhhccCCccceeeeeecC-ceEEec
Confidence                   0000 1             11245677899998888877655 355553

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.47  E-value=2.9e-11  Score=121.69  Aligned_cols=216  Identities=18%  Similarity=0.226  Sum_probs=129.8

Q ss_pred             CCCcEEEEEEcCCCCeEEEEe---CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCC--eEEEEECC
Q psy2671         206 HAEAVISVKFSPNGRSLASGS---GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNG--VIHAWDSS  279 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s---~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg--~i~vwd~~  279 (573)
                      +...+.+.+|||||+.|+..+   .+..+.+|++.+++... +......+...+|+|||++|+.. +.+|  .|.+||+.
T Consensus       197 ~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~  275 (429)
T PRK03629        197 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA  275 (429)
T ss_pred             CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECC
Confidence            456788999999999998654   34679999998875432 12222334568999999988754 4454  58899998


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeC-CCcEEEE--ECCCCeEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIW--DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iw--d~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~  356 (573)
                      +++.. + +..+...+....|.|     +++.++..+. ++..++|  |+..+... .+..+.....+..|++       
T Consensus       276 tg~~~-~-lt~~~~~~~~~~wSP-----DG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~Sp-------  340 (429)
T PRK03629        276 SGQIR-Q-VTDGRSNNTEPTWFP-----DSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSS-------  340 (429)
T ss_pred             CCCEE-E-ccCCCCCcCceEECC-----CCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECC-------
Confidence            87543 2 222334456667765     6777776654 3444555  44433221 2221112222333443       


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                                                                                             +|+.++..+
T Consensus       341 -----------------------------------------------------------------------DG~~Ia~~~  349 (429)
T PRK03629        341 -----------------------------------------------------------------------DGKFMVMVS  349 (429)
T ss_pred             -----------------------------------------------------------------------CCCEEEEEE
Confidence                                                                                   344433332


Q ss_pred             CC---CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc---EEEEeCCCCeEEEeecCCcceEEEEEE
Q psy2671         437 DD---FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS---IKLWDGRIGKFITTLRGHVQAVYMVAW  510 (573)
Q Consensus       437 ~d---g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~---i~lwd~~~~~~~~~~~~h~~~v~~v~~  510 (573)
                      .+   ..+.+||+.++..  ..+... .......|+|||+.|+.++.++.   +.+++. .|+....+.+|.+.+...+|
T Consensus       350 ~~~g~~~I~~~dl~~g~~--~~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~~~~~~~p~W  425 (429)
T PRK03629        350 SNGGQQHIAKQDLATGGV--QVLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPATDGQVKFPAW  425 (429)
T ss_pred             ccCCCceEEEEECCCCCe--EEeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccCCCCcCCccc
Confidence            21   2355556544321  112111 11235689999999999888765   666776 46666777788888888999


Q ss_pred             CC
Q psy2671         511 SS  512 (573)
Q Consensus       511 s~  512 (573)
                      +|
T Consensus       426 sp  427 (429)
T PRK03629        426 SP  427 (429)
T ss_pred             CC
Confidence            87

>KOG0974|consensus

Probab=99.47  E-value=6.1e-12  Score=128.67  Aligned_cols=185  Identities=22%  Similarity=0.377  Sum_probs=146.1

Q ss_pred             CcEEEEEeCCCeEEEEeCCCCeeeEeccCCccee-eEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV-NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      +..++.+..++.+-+||...+...........-. ...+.                                  ...+++
T Consensus        99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~----------------------------------~g~s~~  144 (967)
T KOG0974|consen   99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLI----------------------------------IGDSAE  144 (967)
T ss_pred             cceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEE----------------------------------EeccCc
Confidence            4578888999999999988776655443221100 00000                                  001234


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-eecCCcceEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-TLRGHVQAVYM  507 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~~~~h~~~v~~  507 (573)
                      .-++++|+.-+.+.+|++.....+. ++.||.+.|-.+.++-||+++++.|.|.++|+|++.+.+... +.-+|..+|+.
T Consensus       145 ~~~i~~gsv~~~iivW~~~~dn~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~  223 (967)
T KOG0974|consen  145 ELYIASGSVFGEIIVWKPHEDNKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA  223 (967)
T ss_pred             EEEEEeccccccEEEEeccccCCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE
Confidence            4578999999999999987433333 789999999999999999999999999999999999988766 66789999999


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC-CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD-EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       508 v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~-~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.|+|+  .++|++.|.+.++|+.+... +..+.+|.. .|+.++..++.-.++|++.|+.+++|+
T Consensus       224 ~~~~~n--~i~t~gedctcrvW~~~~~~-l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~  286 (967)
T KOG0974|consen  224 CCFLPN--RIITVGEDCTCRVWGVNGTQ-LEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD  286 (967)
T ss_pred             EEeccc--eeEEeccceEEEEEecccce-ehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence            999998  99999999999999765443 446777754 699999999988999999999999996

>KOG3881|consensus

Probab=99.47  E-value=7.1e-12  Score=114.57  Aligned_cols=199  Identities=16%  Similarity=0.262  Sum_probs=145.8

Q ss_pred             CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       339 ~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ..+|..++. .++.+++|-.+|.+.+|....+..      |......++..+..           .              
T Consensus       105 ~~~I~gl~~-~dg~Litc~~sG~l~~~~~k~~d~------hss~l~~la~g~g~-----------~--------------  152 (412)
T KOG3881|consen  105 TKSIKGLKL-ADGTLITCVSSGNLQVRHDKSGDL------HSSKLIKLATGPGL-----------Y--------------  152 (412)
T ss_pred             cccccchhh-cCCEEEEEecCCcEEEEeccCCcc------ccccceeeecCCce-----------e--------------
Confidence            344444443 356889999999999998775421      22222222221110           0              


Q ss_pred             hhheeeeCCC-CcEEEEEeCC--CeEEEEcCCCCccceeeecc--------ccccEEEEEECCC--CCEEEEeeCCCcEE
Q psy2671         419 LAKYQAQCPE-GEKLVSGSDD--FTLFLWNPEKEKKSLARMTG--------HQQLINCVEFSPD--GRIIASASFDKSIK  485 (573)
Q Consensus       419 ~~~~~~~~~~-~~~l~sg~~d--g~i~lwd~~~~~~~~~~~~~--------h~~~v~~v~~sp~--g~~las~s~dg~i~  485 (573)
                         ....++. ...+++|+..  ..+++||++...+....-.-        -.-.++.+.|-|.  ...+|+++.-+.++
T Consensus       153 ---~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR  229 (412)
T KOG3881|consen  153 ---DVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVR  229 (412)
T ss_pred             ---eeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEE
Confidence               0011122 3456778888  78999999876432211110        1123677889887  88999999999999


Q ss_pred             EEeCCCCe-EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEee
Q psy2671         486 LWDGRIGK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       486 lwd~~~~~-~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      +||.+.++ ++..+..-..+++++...|+|+++++|..-+.+..||+++++.... +.+-.+.|.++..+|..++|+++|
T Consensus       230 ~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~G  309 (412)
T KOG3881|consen  230 LYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCG  309 (412)
T ss_pred             EecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeec
Confidence            99999764 5666666677899999999999999999999999999999998766 889999999999999999999999


Q ss_pred             CCCcEEEcc
Q psy2671         564 KDKVLRLWQ  572 (573)
Q Consensus       564 ~d~~i~iw~  572 (573)
                      -|+.|||++
T Consensus       310 LDRyvRIhD  318 (412)
T KOG3881|consen  310 LDRYVRIHD  318 (412)
T ss_pred             cceeEEEee
Confidence            999999987

>KOG2111|consensus

Probab=99.46  E-value=2.1e-11  Score=108.67  Aligned_cols=223  Identities=13%  Similarity=0.186  Sum_probs=139.4

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc--EEEEEECCCcEEEEEeCC------CeEEEEeCCCCeeeEeccCC
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS--VTCIRWGGSGLIYSASQD------RTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~l~s~s~d------~~i~vw~~~~~~~~~~~~~~  379 (573)
                      +...++.+.++| .|||+..--+.......+...  +..+-|-.+-..+.|+.+      ..+.|||-.....+.++.- 
T Consensus        16 D~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~el~f-   93 (346)
T KOG2111|consen   16 DHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCIIELSF-   93 (346)
T ss_pred             CCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEEEEEe-
Confidence            444566665555 799987542221111112221  112222222233445443      5789999555555544431 


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec--
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT--  457 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~--  457 (573)
                      ..+|.++.++.+.                                       +++. .++.|++|...+..+.+..+.  
T Consensus        94 ~~~I~~V~l~r~r---------------------------------------iVvv-l~~~I~VytF~~n~k~l~~~et~  133 (346)
T KOG2111|consen   94 NSEIKAVKLRRDR---------------------------------------IVVV-LENKIYVYTFPDNPKLLHVIETR  133 (346)
T ss_pred             ccceeeEEEcCCe---------------------------------------EEEE-ecCeEEEEEcCCChhheeeeecc
Confidence            2345555554443                                       2222 345677777654333222221  


Q ss_pred             cccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeCCCc-EEEEeCCc
Q psy2671         458 GHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADST-LKVWNMKT  533 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~D~~-v~vwd~~~  533 (573)
                      ...+.+.++.-+.+..+||.- -.-|.|+|-|+...+.  ...+.+|...|.|++.+.+|.++||+|..|+ |||||..+
T Consensus       134 ~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~  213 (346)
T KOG2111|consen  134 SNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTED  213 (346)
T ss_pred             cCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCC
Confidence            111223333333344456653 3568999999876554  3678899999999999999999999999997 89999999


Q ss_pred             ccccccccCc--CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         534 KKIEQDLPGH--GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       534 ~~~~~~l~~h--~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++.++.++.-  ...|++++|||++.+||.+|.-|+|.|+.
T Consensus       214 g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~  254 (346)
T KOG2111|consen  214 GTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFS  254 (346)
T ss_pred             CcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEE
Confidence            9998877643  34699999999999999999999999984

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.45  E-value=4.4e-11  Score=121.18  Aligned_cols=233  Identities=17%  Similarity=0.196  Sum_probs=139.2

Q ss_pred             CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee---CCeEEEEECCCCceecccccCCcccEEEEEeccccc
Q psy2671         229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK---NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       229 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~  305 (573)
                      ..|.+||..... ...+..|...+.+.+|+|||+.|+..+.   +..|.+||+.++...  .+..+...+....|+|   
T Consensus       182 ~~l~~~d~dg~~-~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~--~l~~~~g~~~~~~~SP---  255 (435)
T PRK05137        182 KRLAIMDQDGAN-VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE--LVGNFPGMTFAPRFSP---  255 (435)
T ss_pred             eEEEEECCCCCC-cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE--EeecCCCcccCcEECC---
Confidence            478889976543 3456677888999999999999987764   468999999887642  2333444555666655   


Q ss_pred             CCCCCEEE-EEeCCCc--EEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcce
Q psy2671         306 NHQCRRFA-SSGKDGA--IRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW  382 (573)
Q Consensus       306 ~~~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~  382 (573)
                        +++.++ +.+.++.  |.+||+..+.. +.+..+........|++++                               
T Consensus       256 --DG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG-------------------------------  301 (435)
T PRK05137        256 --DGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDG-------------------------------  301 (435)
T ss_pred             --CCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCC-------------------------------
Confidence              566654 4555554  55556655443 2333333333344444443                               


Q ss_pred             eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC-C--CeEEEEcCCCCccceeeeccc
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD-D--FTLFLWNPEKEKKSLARMTGH  459 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-d--g~i~lwd~~~~~~~~~~~~~h  459 (573)
                                                                     +.++..+. +  ..|+++|+....  ...+..+
T Consensus       302 -----------------------------------------------~~i~f~s~~~g~~~Iy~~d~~g~~--~~~lt~~  332 (435)
T PRK05137        302 -----------------------------------------------SQIVFESDRSGSPQLYVMNADGSN--PRRISFG  332 (435)
T ss_pred             -----------------------------------------------CEEEEEECCCCCCeEEEEECCCCC--eEEeecC
Confidence                                                           33333321 1  134455543321  1222222


Q ss_pred             cccEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC------CcEEEEe
Q psy2671         460 QQLINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD------STLKVWN  530 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D------~~v~vwd  530 (573)
                      ...+....|+|||+.|+..+.+   ..|.+||...+.. ..+.. ...+....|+|||++|+..+.+      ..+.+++
T Consensus       333 ~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~d  410 (435)
T PRK05137        333 GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVD  410 (435)
T ss_pred             CCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEE
Confidence            3345567899999999876643   3588888765543 33321 1245678999999998765543      2577778


Q ss_pred             CCcccccccccCcCCCEEEEEEcc
Q psy2671         531 MKTKKIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       531 ~~~~~~~~~l~~h~~~v~~~~~s~  554 (573)
                      +.+++. ..+. ..+.+...+|+|
T Consensus       411 l~g~~~-~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        411 LTGRNE-REVP-TPGDASDPAWSP  432 (435)
T ss_pred             CCCCce-EEcc-CCCCccCcccCC
Confidence            766544 3444 234566778876

>KOG2321|consensus

Probab=99.45  E-value=2.9e-11  Score=115.77  Aligned_cols=284  Identities=17%  Similarity=0.294  Sum_probs=181.0

Q ss_pred             CCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCC--CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         205 GHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHK--HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~--~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      +|...-+.+..+|||+|+ |+|-..-.|++||+......+  ..|.  ..|.-.-.+.|-..++--..|.+|.+-.. .|
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKF--ERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak-~G  125 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKF--ERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK-YG  125 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeee--eecccccceeEEEeccchhhheEeecCceeeehhh-cC
Confidence            566777889999999986 666677899999998755433  3343  23443344445444444455655544321 11


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCCC
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDR  360 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~  360 (573)
                      ......++   ..-..++++.    ..+.+++ ++....|.-+++..++.+..+....+.+.++..++- ++|++|+.+|
T Consensus       126 ~hy~~RIP---~~GRDm~y~~----~scDly~-~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g  197 (703)
T KOG2321|consen  126 RHYRTRIP---KFGRDMKYHK----PSCDLYL-VGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDG  197 (703)
T ss_pred             eeeeeecC---cCCccccccC----CCccEEE-eecCcceEEEEccccccccccccccccceeeeecCccceEEecccCc
Confidence            11000000   0001122221    2334444 444556777788888888877777788888888765 4677777788


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      .+..||.++-..+.++..... |++                                        .|.+           
T Consensus       198 ~VEfwDpR~ksrv~~l~~~~~-v~s----------------------------------------~pg~-----------  225 (703)
T KOG2321|consen  198 VVEFWDPRDKSRVGTLDAASS-VNS----------------------------------------HPGG-----------  225 (703)
T ss_pred             eEEEecchhhhhheeeecccc-cCC----------------------------------------Cccc-----------
Confidence            888888776544333321100 000                                        0000           


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCC--CCEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSD--SRLL  517 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~d--g~~l  517 (573)
                                       .....|+++.|+.+|-.+++|..+|.+.|||+++.+.+..-. +..-+|..+.|-+.  +..|
T Consensus       226 -----------------~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v  288 (703)
T KOG2321|consen  226 -----------------DAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKV  288 (703)
T ss_pred             -----------------cccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceE
Confidence                             012348999999999999999999999999999887655432 23446888899765  3455


Q ss_pred             EEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      +|. ....++|||-.+++....+..- ..++.+++.|++..++++-.+..+..
T Consensus       289 ~S~-Dk~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~  339 (703)
T KOG2321|consen  289 VSM-DKRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHT  339 (703)
T ss_pred             Eec-chHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCccee
Confidence            544 3457999999999987777644 45899999999999999988776543

>KOG2315|consensus

Probab=99.45  E-value=2.7e-10  Score=109.19  Aligned_cols=312  Identities=15%  Similarity=0.291  Sum_probs=186.4

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-----eeC-----CeEEEEE
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-----CKN-----GVIHAWD  277 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-----s~d-----g~i~vwd  277 (573)
                      .+....++|++|+++|.+ .++.++|++..+...+.+...-  .+.++.|||-|.+|.+=     ..+     -.+++|+
T Consensus        35 ~~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~  111 (566)
T KOG2315|consen   35 RPCNVFAYSNNGRLFAYS-DNQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYN  111 (566)
T ss_pred             CcceeEEEcCCCcEEEEE-cCCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceeeee
Confidence            346778899999887766 4668999999887655444333  58999999999988642     112     3477999


Q ss_pred             CCCCceecccccC-CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc---EE
Q psy2671         278 SSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG---LI  353 (573)
Q Consensus       278 ~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~l  353 (573)
                      ++++......... ..+|  ...|.+     +. .++.==..+.+.+|++...+.. .-..|...|+...+++.+   .+
T Consensus       112 vet~~~~s~~q~k~Q~~W--~~qfs~-----dE-sl~arlv~nev~f~~~~~f~~~-~~kl~~~~i~~f~lSpgp~~~~v  182 (566)
T KOG2315|consen  112 VETGVQRSQIQKKMQNGW--VPQFSI-----DE-SLAARLVSNEVQFYDLGSFKTI-QHKLSVSGITMLSLSPGPEPPFV  182 (566)
T ss_pred             eccceehhheehhhhcCc--cccccc-----ch-hhhhhhhcceEEEEecCCccce-eeeeeccceeeEEecCCCCCceE
Confidence            9885432211111 1122  233322     11 1221112456888988763221 123356778888887653   22


Q ss_pred             E-----EEeCCCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         354 Y-----SASQDRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       354 ~-----s~s~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      +     ..+.-+.+++|....+.....+...+. .-..+.                +.|+                   +
T Consensus       183 AvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvq----------------m~WN-------------------~  227 (566)
T KOG2315|consen  183 AVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQ----------------MKWN-------------------K  227 (566)
T ss_pred             EEEccCCCCCCcEEEEeccccccccchhhhccccccceeE----------------EEec-------------------c
Confidence            2     245567888887653322111100000 000000                0111                   1


Q ss_pred             CCc-EE--EEEeCC---------CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE--eeCCCcEEEEeCCCCe
Q psy2671         428 EGE-KL--VSGSDD---------FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS--ASFDKSIKLWDGRIGK  493 (573)
Q Consensus       428 ~~~-~l--~sg~~d---------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las--~s~dg~i~lwd~~~~~  493 (573)
                      .|. +|  ++..-|         .++++.+++...  ........++|+++.|+|+|+-+++  |-.=-.+.|+|.+ +.
T Consensus       228 ~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s--~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~  304 (566)
T KOG2315|consen  228 LGTALLVLASTDVDKTNASYYGEQTLYLLATQGES--VSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GK  304 (566)
T ss_pred             CCceEEEEEEEeecCCCccccccceEEEEEecCce--EEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CC
Confidence            111 11  122222         245555554211  1111223678999999999976654  4455679999976 44


Q ss_pred             EEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC------
Q psy2671         494 FITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK------  564 (573)
Q Consensus       494 ~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~------  564 (573)
                      .+..+.  .++-+++-|+|.|++|+.+|.+   |.+-|||+.+.+++..+..-.  -+-++|+|||++++|+..      
T Consensus       305 ~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrv  380 (566)
T KOG2315|consen  305 PVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRV  380 (566)
T ss_pred             EeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEe
Confidence            555543  4566788999999999988865   679999999988887776543  345799999999998875      


Q ss_pred             CCcEEEccC
Q psy2671         565 DKVLRLWQN  573 (573)
Q Consensus       565 d~~i~iw~~  573 (573)
                      |..++||++
T Consensus       381 dNg~Kiwhy  389 (566)
T KOG2315|consen  381 DNGIKIWHY  389 (566)
T ss_pred             cCCeEEEEe
Confidence            567889874

>KOG2139|consensus

Probab=99.43  E-value=3.3e-10  Score=102.71  Aligned_cols=296  Identities=20%  Similarity=0.332  Sum_probs=173.9

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCC-CeEEEEeeCCeEEEEECCCCceec
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDS-KQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg-~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      -.+..++|++.--.+|++..|-+|++||-....+ ..++ .....|.|++|-|-+ .-|+.|+..| |.+|.........
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst~p-t~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~  176 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCP-TKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN  176 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCCCCC-ceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence            3467788999766788999999999999766332 2232 334569999999955 4677777765 8899765321111


Q ss_pred             -----------c--cccCCcccEEEEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCc
Q psy2671         286 -----------Q--PMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG  351 (573)
Q Consensus       286 -----------~--~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  351 (573)
                                 +  ..+|| ..|+++.|++     ++..+++++- |..|+|||..++.++.....--+.++-+.|+|++
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~-----dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdg  250 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNE-----DGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDG  250 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcC-----CCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCC
Confidence                       1  12344 6799999976     5677888764 6789999999988877665566788999999998


Q ss_pred             -EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         352 -LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       352 -~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                       .++.++-|+..++|+...........--...|..-++++.+.+.+.........|...-..+              ++.
T Consensus       251 d~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~--------------~~~  316 (445)
T KOG2139|consen  251 DVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGE--------------DSV  316 (445)
T ss_pred             CEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCC--------------Ccc
Confidence             79999999999999655433222222122255566666665444333322222111000000              000


Q ss_pred             EEEEEeCCCeEEEEcCCCCccceeeecc---ccccEEEEEECCCCCEEEEeeCCCc--------EEEEeCCCCeEEEe--
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKS--------IKLWDGRIGKFITT--  497 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~v~~sp~g~~las~s~dg~--------i~lwd~~~~~~~~~--  497 (573)
                      ..-.++......+=|+..    .....+   --+.+.+++|+|.|.+||+.-..+.        |.+||.+..-.+.-  
T Consensus       317 ~~~~~~~k~~lliaDL~e----~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~  392 (445)
T KOG2139|consen  317 FLRPQSIKRVLLIADLQE----VTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSY  392 (445)
T ss_pred             ccCcccceeeeeeccchh----hhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEe
Confidence            000111111111112210    000111   1245789999999999999765443        66777664322211  


Q ss_pred             ---ecCCcceEEEEEECC---CCCEEEEEeCCCcEEEEeC
Q psy2671         498 ---LRGHVQAVYMVAWSS---DSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       498 ---~~~h~~~v~~v~~s~---dg~~las~s~D~~v~vwd~  531 (573)
                         ..+..  -..+.|+|   +|.+|..+=..|.+.-|.+
T Consensus       393 cg~i~ge~--P~~IsF~pl~n~g~lLsiaWsTGriq~ypl  430 (445)
T KOG2139|consen  393 CGMIGGEY--PAYISFGPLKNEGRLLSIAWSTGRIQRYPL  430 (445)
T ss_pred             cccccCCC--CceEEeeecccCCcEEEEEeccCceEeeee
Confidence               11211  22344554   5667766666677766655

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.42  E-value=4.9e-11  Score=120.66  Aligned_cols=117  Identities=21%  Similarity=0.264  Sum_probs=77.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeC---CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE-EEeeCC--eEEEEEC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSG---DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNG--VIHAWDS  278 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~---d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg--~i~vwd~  278 (573)
                      .|...+.+.+|+|||+.|+..+.   +..|.+||+.+++... +..+.....+.+|+|||+.|+ +.+.+|  .|.+||+
T Consensus       201 ~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~  279 (433)
T PRK04922        201 RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDL  279 (433)
T ss_pred             cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEEC
Confidence            45667889999999999998773   3479999998876532 233334456789999999875 445555  5999999


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEe-CCCc--EEEEECCCC
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGA--IRIWDVILS  329 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~--v~iwd~~~~  329 (573)
                      .++...  .+..+........|.|     +++.++..+ .+|.  |.++++..+
T Consensus       280 ~~g~~~--~lt~~~~~~~~~~~sp-----DG~~l~f~sd~~g~~~iy~~dl~~g  326 (433)
T PRK04922        280 GSRQLT--RLTNHFGIDTEPTWAP-----DGKSIYFTSDRGGRPQIYRVAASGG  326 (433)
T ss_pred             CCCCeE--ECccCCCCccceEECC-----CCCEEEEEECCCCCceEEEEECCCC
Confidence            887642  2334443344556654     677777655 3444  444454433

>KOG2139|consensus

Probab=99.41  E-value=2.3e-11  Score=110.03  Aligned_cols=193  Identities=22%  Similarity=0.457  Sum_probs=130.9

Q ss_pred             EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCC-e
Q psy2671         295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDG-V  371 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~-~  371 (573)
                      +..++|++ |+    ..++.+..|-.||+|+-....+...-..-+..|+|++|.|.+  .++.|.. +-|.+|....- .
T Consensus       101 lr~~aWhq-H~----~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~tln  174 (445)
T KOG2139|consen  101 LRGVAWHQ-HI----IAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSRTLN  174 (445)
T ss_pred             eeeEeech-hh----hhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCcccc
Confidence            55677776 22    247889999999999977643333333456789999998764  4555554 45788865421 0


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK  451 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~  451 (573)
                      ..+..                                                         .+.          .+...
T Consensus       175 ~~r~~---------------------------------------------------------~~~----------s~~~~  187 (445)
T KOG2139|consen  175 ANRNI---------------------------------------------------------RMM----------STHHL  187 (445)
T ss_pred             ccccc---------------------------------------------------------ccc----------cccch
Confidence            00000                                                         000          01111


Q ss_pred             ceeeeccccccEEEEEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         452 SLARMTGHQQLINCVEFSPDGRIIASASF-DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       452 ~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      .+..-.|| .+|+++++.+||..+++++. |..|.|||+.++..+.-.....+.++-+.|||||.+|..+.-|+..++|+
T Consensus       188 qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~  266 (445)
T KOG2139|consen  188 QVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQ  266 (445)
T ss_pred             hheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeeh
Confidence            22233456 67999999999999999885 57799999999876655434456788999999999999999999999995


Q ss_pred             CC-cccccccccCcCCCEEEEEEccCCCEEEEe
Q psy2671         531 MK-TKKIEQDLPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       531 ~~-~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      .. +....+-.- -.+.|....|+|+|++|+-+
T Consensus       267 e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~  298 (445)
T KOG2139|consen  267 ENQSWTKERWIL-GSGRVQTACWSPCGSFLLFA  298 (445)
T ss_pred             hcccceecceec-cCCceeeeeecCCCCEEEEE
Confidence            43 333333222 24589999999999986543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.39  E-value=9.8e-10  Score=109.63  Aligned_cols=307  Identities=13%  Similarity=0.081  Sum_probs=187.4

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEE
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL  298 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~  298 (573)
                      +..++.++.++.+..+|..+++.+....-......+.+.  ++..++.++.+|.+..+|..+|+.+.+....  ..+.  
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~--~~~~--  138 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS--SEVL--  138 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC--ceee--
Confidence            567888889999999999999988765544322222222  4678889999999999999999876542211  1111  


Q ss_pred             EecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE-----EEEECCCcEEEEEeCCCeEEEEeCCCCeee
Q psy2671         299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT-----CIRWGGSGLIYSASQDRTIKVWRASDGVMC  373 (573)
Q Consensus       299 ~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-----~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~  373 (573)
                       -.|..   .+..++.++.+|.+..||..+++.+...........     +.... ++.++.+..++.+..+|.++|...
T Consensus       139 -~~p~v---~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~~~v~~~~~~g~v~ald~~tG~~~  213 (377)
T TIGR03300       139 -SPPLV---ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-DGGVLVGFAGGKLVALDLQTGQPL  213 (377)
T ss_pred             -cCCEE---ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-CCEEEEECCCCEEEEEEccCCCEe
Confidence             11211   234566677899999999998887665543322111     11111 356788888899999998887653


Q ss_pred             EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccce
Q psy2671         374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL  453 (573)
Q Consensus       374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~  453 (573)
                      -.....        ....           .        .... ............+..+..++.+|.++.||.++++...
T Consensus       214 W~~~~~--------~~~g-----------~--------~~~~-~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W  265 (377)
T TIGR03300       214 WEQRVA--------LPKG-----------R--------TELE-RLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLW  265 (377)
T ss_pred             eeeccc--------cCCC-----------C--------Cchh-hhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEE
Confidence            221100        0000           0        0000 0000000000124577778889999999988764332


Q ss_pred             eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc-eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ-AVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       454 ~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~-~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ..-.  . .....  ..++..+..++.||.+..+|..+|+.+........ .......  .+..|++++.+|.|+++|..
T Consensus       266 ~~~~--~-~~~~p--~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~  338 (377)
T TIGR03300       266 KRDA--S-SYQGP--AVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRE  338 (377)
T ss_pred             eecc--C-CccCc--eEeCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECC
Confidence            2111  1 11111  22456777888999999999999987765422111 1111122  36688899999999999999


Q ss_pred             cccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       533 ~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +++.+..++.+...+.+--...+ +.|..++.||.|+.|+
T Consensus       339 tG~~~~~~~~~~~~~~~sp~~~~-~~l~v~~~dG~l~~~~  377 (377)
T TIGR03300       339 DGSFVARLKTDGSGIASPPVVVG-DGLLVQTRDGDLYAFR  377 (377)
T ss_pred             CCCEEEEEEcCCCccccCCEEEC-CEEEEEeCCceEEEeC
Confidence            99998877766544433322334 3588899999998763

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG1409|consensus

Probab=99.38  E-value=8.4e-11  Score=105.85  Aligned_cols=327  Identities=20%  Similarity=0.285  Sum_probs=192.8

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccC-CcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      +.+.+.||.+.|.+...-|..+-+.+.+.|.+||||--.+ ++-                                    
T Consensus        16 ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~------------------------------------   59 (404)
T KOG1409|consen   16 LLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQY------------------------------------   59 (404)
T ss_pred             hhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccccc------------------------------------
Confidence            3456789999999999999999999999999999995321 110                                    


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC----CeeeEEecCCCCcEEEEE
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGHKHWVLCIA  256 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~----~~~~~~~~~h~~~V~~v~  256 (573)
                                   ++.  ..+   .-..+++++.++++.+.|+.|-..|++.=+.+..    -..+.....|...|..+-
T Consensus        60 -------------wps--I~~---~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~i  121 (404)
T KOG1409|consen   60 -------------WPS--IYH---YMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIV  121 (404)
T ss_pred             -------------Cch--hhh---hCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEE
Confidence                         000  000   1235678999999999999999999998886543    233445567999999999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC--CCCeEEEE
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV--ILSQCVRV  334 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~--~~~~~~~~  334 (573)
                      |+-....+++.+.|..+.---.+.+..+....     -+....-.++    +-.+...|...|.|.+-.+  ..-..+..
T Consensus       122 f~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~-----~~~~~t~~~~----d~~~~fvGd~~gqvt~lr~~~~~~~~i~~  192 (404)
T KOG1409|consen  122 FSLTHEWVLSTGKDKQFAWHCTESGNRLGGYN-----FETPASALQF----DALYAFVGDHSGQITMLKLEQNGCQLITT  192 (404)
T ss_pred             ecCCceeEEEeccccceEEEeeccCCcccceE-----eeccCCCCce----eeEEEEecccccceEEEEEeecCCceEEE
Confidence            99888899999999776544444444332110     0000000000    0001112222233322222  22234555


Q ss_pred             ecCCCccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         335 LTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                      +.+|...+.++.|.+. +.+++|..|..+.+||+                                              
T Consensus       193 ~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdi----------------------------------------------  226 (404)
T KOG1409|consen  193 FNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDI----------------------------------------------  226 (404)
T ss_pred             EcCcccceEEEEEcCCCcEEEeccccCceEEEec----------------------------------------------
Confidence            6666666666666543 35566666666666654                                              


Q ss_pred             hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe
Q psy2671         414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK  493 (573)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~  493 (573)
                                                       ...+.....+.+|.+.|..+..-+--+.+.+++.||.|.+||....+
T Consensus       227 ---------------------------------gg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn~~r  273 (404)
T KOG1409|consen  227 ---------------------------------GGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMNVKR  273 (404)
T ss_pred             ---------------------------------cCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecccee
Confidence                                             33233334556777778888887888899999999999999975432


Q ss_pred             EEE----------e-------------------ecCCc-----ceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc----
Q psy2671         494 FIT----------T-------------------LRGHV-----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK----  535 (573)
Q Consensus       494 ~~~----------~-------------------~~~h~-----~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~----  535 (573)
                      ...          .                   ++-|.     ..|...+ +....-..+-+..-.+|+-|.-...    
T Consensus       274 ~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~crkcg~avc~~c-~s~~~~~p~mg~e~~vR~~~~c~~~i~~~  352 (404)
T KOG1409|consen  274 VETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKC-SSNRSSYPTMGFEFSVRVCDSCYPTIKDE  352 (404)
T ss_pred             ecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhhhhhhhhhcCccc-ccCccccccccceeEEEEecccchhhhcC
Confidence            110          0                   00010     1111111 1111122233333345555432111    


Q ss_pred             ---ccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         536 ---IEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       536 ---~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                         .+... ..| -.|+++.+-..-..|+|+|.|+.|+||+
T Consensus       353 ~~t~LA~phei~-tgItamhlqetlglLvTsG~~Rvi~iwd  392 (404)
T KOG1409|consen  353 ERTPLAIPHEIK-TGITAMHLQETLGLLVTSGTDRVIKIWD  392 (404)
T ss_pred             CCCccccccccc-cceeEEEhhhhccceeecCCceEEEEEe
Confidence               11111 122 3588998888888999999999999997

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.37  E-value=3.6e-11  Score=106.40  Aligned_cols=115  Identities=24%  Similarity=0.469  Sum_probs=87.9

Q ss_pred             ccccEEEEEEcCCCCeeEEe--eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         109 HAEAVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~--s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      ..++|.+++|+|+|+.+|..  ..++.|++||+. +.++..                                       
T Consensus        58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~---------------------------------------   97 (194)
T PF08662_consen   58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFS---------------------------------------   97 (194)
T ss_pred             CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEe---------------------------------------
Confidence            44579999999999986544  467899999985 222211                                       


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC---CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD---TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d---~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                      +  +...+..+.|||+|++|++|+.+   |.+.+||..+.+.+......  .+..++|+|||++
T Consensus        98 ----------------~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~--~~t~~~WsPdGr~  157 (194)
T PF08662_consen   98 ----------------F--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS--DATDVEWSPDGRY  157 (194)
T ss_pred             ----------------e--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC--cEEEEEEcCCCCE
Confidence                            1  23567789999999999998744   67999999988887665432  4789999999999


Q ss_pred             EEEEee------CCeEEEEECCCCcee
Q psy2671         264 LVSGCK------NGVIHAWDSSTGKQI  284 (573)
Q Consensus       264 l~sgs~------dg~i~vwd~~~~~~~  284 (573)
                      |++++.      |..+++|+.. |+.+
T Consensus       158 ~~ta~t~~r~~~dng~~Iw~~~-G~~l  183 (194)
T PF08662_consen  158 LATATTSPRLRVDNGFKIWSFQ-GRLL  183 (194)
T ss_pred             EEEEEeccceeccccEEEEEec-CeEe
Confidence            998874      6788999984 5443

>KOG1912|consensus

Probab=99.37  E-value=3.5e-10  Score=112.22  Aligned_cols=390  Identities=16%  Similarity=0.238  Sum_probs=232.5

Q ss_pred             ccccCCCccccEEEEEEcCCC------------CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccc
Q psy2671         102 CTSSMPGHAEAVISVKFSPNG------------RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADV  169 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~------------~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (573)
                      ...+++-|...|+.+.|.|-.            -+||++...|.|.|||...+...                        
T Consensus        47 ~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~------------------------  102 (1062)
T KOG1912|consen   47 LIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVI------------------------  102 (1062)
T ss_pred             hhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhh------------------------
Confidence            445677799999999987521            25788888899999998765322                        


Q ss_pred             cCCCCCCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC---CC-CeEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671         170 LPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP---NG-RSLASGSGDTTVRFWDVTTQTPLFKC  245 (573)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp---~g-~~las~s~d~~i~iwd~~~~~~~~~~  245 (573)
                                                     ..+..|.++|..++|-|   +. ..|+.-..-.++.+|+..+|+.++..
T Consensus       103 -------------------------------~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~  151 (1062)
T KOG1912|consen  103 -------------------------------NWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKY  151 (1062)
T ss_pred             -------------------------------hhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeecc
Confidence                                           12445788888998865   33 46677778889999999999998887


Q ss_pred             cCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCce------ecccccCCcc----------------cEEEEEec-
Q psy2671         246 EGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQ------IGQPMRGHKQ----------------WITALSWE-  301 (573)
Q Consensus       246 ~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~------~~~~~~~h~~----------------~v~~~~~~-  301 (573)
                      ........|+.+.| |.+.+..-+..|.+.+-+.-.-+.      ..+....|.+                .-.+..|. 
T Consensus       152 ~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fit  231 (1062)
T KOG1912|consen  152 DYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFIT  231 (1062)
T ss_pred             ccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHH
Confidence            65556677899988 667777777788887776432111      0011111111                00000000 


Q ss_pred             ---ccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc---EEEEEeCCCeEEEEeCCCCeeeEe
Q psy2671         302 ---PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG---LIYSASQDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       302 ---~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i~vw~~~~~~~~~~  375 (573)
                         .+.+.+.-+.++-......+.++|++...++....-..+.+.-+.|-|++   .++....||.+.+|..+......+
T Consensus       232 y~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~  311 (1062)
T KOG1912|consen  232 YCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFK  311 (1062)
T ss_pred             HHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCcccc
Confidence               01112222333444456778889998888877766656666666776553   689999999999997654211100


Q ss_pred             cc-CC-----cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-CcEEEEEeCCCeEEEEcCCC
Q psy2671         376 LE-GH-----AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       376 ~~-~~-----~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~lwd~~~  448 (573)
                      .. .|     ...+..++.-....              +.            ....||. ...++.--.+|...+|.+.+
T Consensus       312 ~~~~~l~~dl~~Q~~~vr~m~~~r--------------p~------------~~~~cPs~~sa~avl~s~g~~~~w~l~~  365 (1062)
T KOG1912|consen  312 KPNASLSMDLGEQVHVVRPMEEFR--------------PV------------IGASCPSTPSALAVLYSSGDSTFWQLSN  365 (1062)
T ss_pred             ccchhhccccccceEEEeechhcc--------------cc------------eeecCCCChhhhhhhhhcchhHHHhhhc
Confidence            00 00     01111111110000              00            0000111 01111111112222222111


Q ss_pred             Cc------------------------------cceeeeccccccEEEEEECC-----------CC-------CEEEEeeC
Q psy2671         449 EK------------------------------KSLARMTGHQQLINCVEFSP-----------DG-------RIIASASF  480 (573)
Q Consensus       449 ~~------------------------------~~~~~~~~h~~~v~~v~~sp-----------~g-------~~las~s~  480 (573)
                      ++                              ..+....+|.....++...|           -|       .++|.|..
T Consensus       366 ~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~  445 (1062)
T KOG1912|consen  366 GRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTN  445 (1062)
T ss_pred             CCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecC
Confidence            00                              00111123444444444332           22       26889999


Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE---------EEeCCCcEEEEeCCccccc--ccccC-cCCCEE
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV---------SGSADSTLKVWNMKTKKIE--QDLPG-HGDEVY  548 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la---------s~s~D~~v~vwd~~~~~~~--~~l~~-h~~~v~  548 (573)
                      .|+|.++|+.++.....+..|...|.++.|.....++-         +++.-+.+.+=|+++|...  +.+++ ...+|.
T Consensus       446 sGTV~vvdvst~~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~  525 (1062)
T KOG1912|consen  446 SGTVDVVDVSTNAVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIR  525 (1062)
T ss_pred             CceEEEEEecchhhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcce
Confidence            99999999999988888999999999999987765543         2222345778888887543  32332 356899


Q ss_pred             EEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         549 AVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       549 ~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+..|..++||+..-.|.-+-+|+
T Consensus       526 ~irvS~~~~yLai~Fr~~plEiwd  549 (1062)
T KOG1912|consen  526 AIRVSSSGRYLAILFRREPLEIWD  549 (1062)
T ss_pred             eeeecccCceEEEEecccchHHHh
Confidence            999999999999999999888886

>KOG2314|consensus

Probab=99.37  E-value=4.2e-10  Score=107.53  Aligned_cols=283  Identities=21%  Similarity=0.299  Sum_probs=157.6

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeC-----------CCeEEEEECCCCeeeEEecCCC--CcE-EEEEEcCCCCeEEEEeeCC
Q psy2671         206 HAEAVISVKFSPNGRSLASGSG-----------DTTVRFWDVTTQTPLFKCEGHK--HWV-LCIAWSPDSKQLVSGCKNG  271 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~-----------d~~i~iwd~~~~~~~~~~~~h~--~~V-~~v~~s~dg~~l~sgs~dg  271 (573)
                      |. .|.-+.|||..++|+|=|.           ...++|||+.+|.....+....  ..+ .=..||.|++++|.-.. .
T Consensus       249 Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~  326 (698)
T KOG2314|consen  249 HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-N  326 (698)
T ss_pred             CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-c
Confidence            43 4788899999999998652           2689999999997665544311  112 33579999999987666 4


Q ss_pred             eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe-----CCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-----KDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      .|.+++...-..+.. -.-.-..|....|+|.     +..||--.     .-..+.+-.+.+++.+++-..|+-.-..+.
T Consensus       327 sisIyEtpsf~lld~-Kslki~gIr~FswsP~-----~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLh  400 (698)
T KOG2314|consen  327 SISIYETPSFMLLDK-KSLKISGIRDFSWSPT-----SNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLH  400 (698)
T ss_pred             eEEEEecCceeeecc-cccCCccccCcccCCC-----cceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEE
Confidence            688998765322211 1112234556667663     33343211     112344455555555555544544444556


Q ss_pred             ECCCcEEEEEeCCCe-----------EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         347 WGGSGLIYSASQDRT-----------IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       347 ~~~~~~l~s~s~d~~-----------i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      |..+|..++---|+.           +.|+.++.         ..-+|..+.+.           .              
T Consensus       401 WQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrire---------KdIpve~velk-----------e--------------  446 (698)
T KOG2314|consen  401 WQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIRE---------KDIPVEVVELK-----------E--------------  446 (698)
T ss_pred             eccCCcEEEEEEEeeccccccceEeeEEEEEeec---------cCCCceeeecc-----------h--------------
Confidence            655553222111111           11111111         00011111000           0              


Q ss_pred             hhhhhheeeeCCCCcEEEEEeC---CCeEEEEcCCCC-cc--ceeeeccccccEEEEEECCCCCEEEEe---eCCCcEEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSD---DFTLFLWNPEKE-KK--SLARMTGHQQLINCVEFSPDGRIIASA---SFDKSIKL  486 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~---dg~i~lwd~~~~-~~--~~~~~~~h~~~v~~v~~sp~g~~las~---s~dg~i~l  486 (573)
                         ....-++-|.|+.+++.+.   ..++.+|..++. ..  .+..+.  ....+.|.|+|.|++++.+   |..|.+.+
T Consensus       447 ---~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F  521 (698)
T KOG2314|consen  447 ---SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEF  521 (698)
T ss_pred             ---heeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEE
Confidence               0001123367777665543   247888877632 21  112222  2446889999999998876   45788999


Q ss_pred             EeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeCCcccc
Q psy2671         487 WDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNMKTKKI  536 (573)
Q Consensus       487 wd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~~~~~~  536 (573)
                      +|.....+..+ ...| ...+.+.|.|.|+|+++++.      |..-+||+++...+
T Consensus       522 ~D~~~a~~k~~~~~eh-~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll  577 (698)
T KOG2314|consen  522 YDTDYADLKDTASPEH-FAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLL  577 (698)
T ss_pred             EecchhhhhhccCccc-cccccceECCCCCEEEEeeehhhhccccceEEEEeecHHH
Confidence            99774222222 1234 34578899999999999875      55678888876443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.36  E-value=7.5e-11  Score=118.89  Aligned_cols=206  Identities=19%  Similarity=0.161  Sum_probs=126.8

Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC---CeEEEEeCCCCeeeEeccCCcceeeEEEeccCcee
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD---RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d---~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  394 (573)
                      ..+.++|.. +...+.+..+...+.+.+|++++ .++..+.+   ..|.+||+.++..... ..........        
T Consensus       176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-~~~~g~~~~~--------  245 (427)
T PRK02889        176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-ANFKGSNSAP--------  245 (427)
T ss_pred             cEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-ecCCCCccce--------
Confidence            356666663 33344555677788999999988 45555432   4589999987754321 1111111112        


Q ss_pred             EEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC
Q psy2671         395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR  473 (573)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~  473 (573)
                                                   .++|+|..++ +.+.++...+|.+.........+..+........|+|||+
T Consensus       246 -----------------------------~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~  296 (427)
T PRK02889        246 -----------------------------AWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGR  296 (427)
T ss_pred             -----------------------------EECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCC
Confidence                                         2347777776 5567777666654322222445555555566789999999


Q ss_pred             EEEEeeC-CCcEEEEe--CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCCcccccccccCcCCCE
Q psy2671         474 IIASASF-DKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMKTKKIEQDLPGHGDEV  547 (573)
Q Consensus       474 ~las~s~-dg~i~lwd--~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~~~~~~~~l~~h~~~v  547 (573)
                      .|+..+. +|...+|.  ..+++... +..+.......+|||||++|+..+.++   .|.+||+.+++... +..+ ...
T Consensus       297 ~l~f~s~~~g~~~Iy~~~~~~g~~~~-lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~  373 (427)
T PRK02889        297 SIYFTSDRGGAPQIYRMPASGGAAQR-VTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRD  373 (427)
T ss_pred             EEEEEecCCCCcEEEEEECCCCceEE-EecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCc
Confidence            8886654 46666664  44443222 211222334578999999998777654   59999998876543 3222 234


Q ss_pred             EEEEEccCCCEEEEeeCCC
Q psy2671         548 YAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       548 ~~~~~s~d~~~l~s~~~d~  566 (573)
                      ....|+|||++|+.++.++
T Consensus       374 ~~p~~spdg~~l~~~~~~~  392 (427)
T PRK02889        374 ESPSFAPNGRYILYATQQG  392 (427)
T ss_pred             cCceECCCCCEEEEEEecC
Confidence            5789999999988777554

>KOG2321|consensus

Probab=99.36  E-value=3.3e-10  Score=108.67  Aligned_cols=280  Identities=17%  Similarity=0.265  Sum_probs=172.9

Q ss_pred             CccccEEEEEEcCCCCe-eEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         108 GHAEAVISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~-lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      +|...-+.+..+|||+| +|||-|--.|+++|+..-...+                                        
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKF----------------------------------------   88 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKF----------------------------------------   88 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEcccceeee----------------------------------------
Confidence            46777788899999997 5677889999999986533211                                        


Q ss_pred             ceeeEEEeeccccccCCCCCC--CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHA--EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~--~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                       ..|.  +.|.-.-.+-|-..++--..|.+|-+...-. . -+..+-. ..-..++++.-.--|
T Consensus        89 -----------------ERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G-~-hy~~RIP-~~GRDm~y~~~scDl  148 (703)
T KOG2321|consen   89 -----------------ERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG-R-HYRTRIP-KFGRDMKYHKPSCDL  148 (703)
T ss_pred             -----------------eecccccceeEEEeccchhhheEeecCceeeehhhcC-e-eeeeecC-cCCccccccCCCccE
Confidence                             1121  1222222333333344444566666644211 1 0111111 112345555333336


Q ss_pred             EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC------
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH------  338 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h------  338 (573)
                      +.++....|.-.+++.|+.+ .++......+.++..++.+     .+|++|+.+|.|-.||.+....+..+...      
T Consensus       149 y~~gsg~evYRlNLEqGrfL-~P~~~~~~~lN~v~in~~h-----gLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~  222 (703)
T KOG2321|consen  149 YLVGSGSEVYRLNLEQGRFL-NPFETDSGELNVVSINEEH-----GLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSH  222 (703)
T ss_pred             EEeecCcceEEEEccccccc-cccccccccceeeeecCcc-----ceEEecccCceEEEecchhhhhheeeecccccCCC
Confidence            66666677888899988765 4566666777777766643     47888999999999999876655444321      


Q ss_pred             Cc-----cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         339 TR-----SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       339 ~~-----~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                      ..     .|+++.|.++|                                                              
T Consensus       223 pg~~~~~svTal~F~d~g--------------------------------------------------------------  240 (703)
T KOG2321|consen  223 PGGDAAPSVTALKFRDDG--------------------------------------------------------------  240 (703)
T ss_pred             ccccccCcceEEEecCCc--------------------------------------------------------------
Confidence            11     24444444333                                                              


Q ss_pred             hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEEEeCCC
Q psy2671         414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       414 ~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~lwd~~~  491 (573)
                                      -.+++|..+|.+.+||++.....+..-.+..-+|..+.|.+.  +..+++. ....++|||-.+
T Consensus       241 ----------------L~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~  303 (703)
T KOG2321|consen  241 ----------------LHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECT  303 (703)
T ss_pred             ----------------eeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhccccc
Confidence                            345555556666666665544433333333446777888664  3455544 346789999999


Q ss_pred             CeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      |+....+.. ...++.+++-|++.++.+|-.+..+..|-+..
T Consensus       304 Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  304 GKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             CCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence            998777653 34589999999999999999888888776654

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.34  E-value=2.4e-09  Score=106.88  Aligned_cols=260  Identities=14%  Similarity=0.126  Sum_probs=155.6

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEE
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA  297 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~  297 (573)
                      ++..++.++.++.+..+|..+++.+....... .+.+.... .+..++.++.+|.+..||.++|+.+.+.... ......
T Consensus       104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-~~~~~~  180 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRV-TPALTL  180 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccC-CCceee
Confidence            46678888899999999999998877654322 22211111 3456788888999999999999865432111 100000


Q ss_pred             EE-ecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc----------cEE-EEEECCCcEEEEEeCCCeEEEE
Q psy2671         298 LS-WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR----------SVT-CIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       298 ~~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~----------~v~-~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      .. -.|..   .+..++.+..+|.+..+|..+++..........          .+. .... .++.++.++.++.+..+
T Consensus       181 ~~~~sp~~---~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~-~~~~vy~~~~~g~l~a~  256 (377)
T TIGR03300       181 RGSASPVI---ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV-DGGQVYAVSYQGRVAAL  256 (377)
T ss_pred             cCCCCCEE---ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE-ECCEEEEEEcCCEEEEE
Confidence            00 01111   123567777889999999988876543221000          010 1111 24578889999999999


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      |..+|+..-..... .                                        .......+..+..++.+|.+..+|
T Consensus       257 d~~tG~~~W~~~~~-~----------------------------------------~~~p~~~~~~vyv~~~~G~l~~~d  295 (377)
T TIGR03300       257 DLRSGRVLWKRDAS-S----------------------------------------YQGPAVDDNRLYVTDADGVVVALD  295 (377)
T ss_pred             ECCCCcEEEeeccC-C----------------------------------------ccCceEeCCEEEEECCCCeEEEEE
Confidence            99888654222100 0                                        000002355677788899999999


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE-EEECCCCCEEEEEeCCC
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSADS  524 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~D~  524 (573)
                      ..++...............+...  .+..|++++.+|.+.++|..+|+.+..++.+...+.. .++. ++ .|+.++.||
T Consensus       296 ~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~~dG  371 (377)
T TIGR03300       296 RRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQTRDG  371 (377)
T ss_pred             CCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEeCCc
Confidence            87664322210100111112122  3568889999999999999999998888765543322 2222 33 577888999


Q ss_pred             cEEEE
Q psy2671         525 TLKVW  529 (573)
Q Consensus       525 ~v~vw  529 (573)
                      .|..|
T Consensus       372 ~l~~~  376 (377)
T TIGR03300       372 DLYAF  376 (377)
T ss_pred             eEEEe
Confidence            88765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG4547|consensus

Probab=99.34  E-value=1e-10  Score=112.89  Aligned_cols=142  Identities=19%  Similarity=0.259  Sum_probs=120.9

Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeee-ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARM-TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~-~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                      +-..++-|...|.|.+|+...++...... ..|.+.|+++.++.+...|.+++.|+.+..|+...++.+...++....+.
T Consensus        69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~  148 (541)
T KOG4547|consen   69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVS  148 (541)
T ss_pred             CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccc
Confidence            34577888899999999987665433333 46889999999999999999999999999999999999999998888899


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccC-----CCEEE-EeeCCCcEEEc
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD-----GEKVA-SGGKDKVLRLW  571 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d-----~~~l~-s~~~d~~i~iw  571 (573)
                      +++.+|||+.|++|+.  .|++||+++++.+..+.||.++|.++.|-.+     |++++ +...+.-+.+|
T Consensus       149 sl~is~D~~~l~~as~--~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w  217 (541)
T KOG4547|consen  149 SLCISPDGKILLTASR--QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVW  217 (541)
T ss_pred             eEEEcCCCCEEEeccc--eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEE
Confidence            9999999999999875  6999999999999999999999999999987     66655 44555556666

>KOG2041|consensus

Probab=99.34  E-value=3.9e-10  Score=110.76  Aligned_cols=311  Identities=14%  Similarity=0.244  Sum_probs=194.5

Q ss_pred             ccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceee
Q psy2671         111 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAV  190 (573)
Q Consensus       111 ~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (573)
                      ....|++|.....+||.||.||.++|-.+.+.++-.+..+.               +.   .                  
T Consensus        15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~gl---------------aa---~------------------   58 (1189)
T KOG2041|consen   15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGL---------------AA---A------------------   58 (1189)
T ss_pred             ceEEEEEEcccCCeEEeccccceeEEEEccccCCccccccc---------------cc---c------------------
Confidence            35678999999999999999999999999876543221110               00   0                  


Q ss_pred             EEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEE--ecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         191 FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       191 ~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                          ....-..++.||.+.|..+.|+-+.+.|-|...+|.|.+|-+-.+.-...  ....++.|.+++|+.||..++..-
T Consensus        59 ----snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvY  134 (1189)
T KOG2041|consen   59 ----SNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVY  134 (1189)
T ss_pred             ----cccchhhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEE
Confidence                00001246789999999999999999999999999999998876543221  123456799999999999999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc-EEEEEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRW  347 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~-v~~~~~  347 (573)
                      .||.|.|=.++..+.-.+.++|..  ...+.|++     +.+.++-+-..|.+.+||....-.. .+  |... |+.   
T Consensus       135 eDGavIVGsvdGNRIwgKeLkg~~--l~hv~ws~-----D~~~~Lf~~ange~hlydnqgnF~~-Kl--~~~c~Vn~---  201 (1189)
T KOG2041|consen  135 EDGAVIVGSVDGNRIWGKELKGQL--LAHVLWSE-----DLEQALFKKANGETHLYDNQGNFER-KL--EKDCEVNG---  201 (1189)
T ss_pred             ccCCEEEEeeccceecchhcchhe--ccceeecc-----cHHHHHhhhcCCcEEEecccccHHH-hh--hhceEEee---
Confidence            999888776654433233333321  23455554     3344555556788888886432111 11  1100 000   


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                             +|...                -.+|  .+..+.+..                             ..+....|
T Consensus       202 -------tg~~s----------------~~~~--kia~i~w~~-----------------------------g~~~~v~p  227 (1189)
T KOG2041|consen  202 -------TGIFS----------------NFPT--KIAEIEWNT-----------------------------GPYQPVPP  227 (1189)
T ss_pred             -------eeeec----------------CCCc--cccceeecc-----------------------------CccccCCC
Confidence                   00000                0000  000000000                             00111226


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC---------cEEEEeCCCCeEEEee
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK---------SIKLWDGRIGKFITTL  498 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg---------~i~lwd~~~~~~~~~~  498 (573)
                      +...++.+-..|.+.+-.-++...+...-.+  -.+....|+++|..||+++.|.         .|.+|.. -|+.+.++
T Consensus       228 drP~lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtl  304 (1189)
T KOG2041|consen  228 DRPRLAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTL  304 (1189)
T ss_pred             CCCEEEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEE
Confidence            7788999999999888765554444433333  4577889999999999998763         4566643 46777888


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +.....|+.++|-..|-.+|.+ .|+.|++=+++
T Consensus       305 kvpg~~It~lsWEg~gLriA~A-vdsfiyfanIR  337 (1189)
T KOG2041|consen  305 KVPGSCITGLSWEGTGLRIAIA-VDSFIYFANIR  337 (1189)
T ss_pred             ecCCceeeeeEEcCCceEEEEE-ecceEEEEeec
Confidence            8777889999998777666654 45666555543

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.31  E-value=7.3e-10  Score=112.35  Aligned_cols=202  Identities=18%  Similarity=0.141  Sum_probs=130.2

Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe---CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCcee
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS---QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s---~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  394 (573)
                      ..|.++|... ...+.+..|...+.+..|++++ .|+..+   .+..|.+|++.++... .+..+...+...        
T Consensus       182 ~~l~~~d~dg-~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~--------  251 (435)
T PRK05137        182 KRLAIMDQDG-ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAP--------  251 (435)
T ss_pred             eEEEEECCCC-CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCc--------
Confidence            3677888744 3445667788899999999988 455444   2468999999876542 122121111112        


Q ss_pred             EEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEeCCCe--EEEEcCCCCccceeeeccccccEEEEEECCC
Q psy2671         395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGSDDFT--LFLWNPEKEKKSLARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~  471 (573)
                                                   .++|+|+.|+ +.+.++.  |++||+.++.  ...+..+........|+||
T Consensus       252 -----------------------------~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~--~~~Lt~~~~~~~~~~~spD  300 (435)
T PRK05137        252 -----------------------------RFSPDGRKVVMSLSQGGNTDIYTMDLRSGT--TTRLTDSPAIDTSPSYSPD  300 (435)
T ss_pred             -----------------------------EECCCCCEEEEEEecCCCceEEEEECCCCc--eEEccCCCCccCceeEcCC
Confidence                                         2347777665 5555554  6777876543  3455555555677899999


Q ss_pred             CCEEEEeeC-CC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcccccccccCcCC
Q psy2671         472 GRIIASASF-DK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQDLPGHGD  545 (573)
Q Consensus       472 g~~las~s~-dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~~~~~l~~h~~  545 (573)
                      |+.|+..+. +|  .|.+||...++. ..+..+...+...+|||||++|+..+.+   ..|.+||+.++.. +.+. ...
T Consensus       301 G~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~  377 (435)
T PRK05137        301 GSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGF  377 (435)
T ss_pred             CCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCC
Confidence            999887663 33  578888776643 3333233456678899999999876643   3588888865443 2232 122


Q ss_pred             CEEEEEEccCCCEEEEeeC
Q psy2671         546 EVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~~~  564 (573)
                      .+....|+|||++|+..+.
T Consensus       378 ~~~~p~~spDG~~i~~~~~  396 (435)
T PRK05137        378 LVEGPTWAPNGRVIMFFRQ  396 (435)
T ss_pred             CCCCCeECCCCCEEEEEEc
Confidence            4667899999999876554

>KOG4547|consensus

Probab=99.28  E-value=8.2e-10  Score=106.76  Aligned_cols=211  Identities=21%  Similarity=0.355  Sum_probs=143.8

Q ss_pred             cCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccE
Q psy2671         216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI  295 (573)
Q Consensus       216 sp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v  295 (573)
                      .|.+.++|....||.+||||...++....+.            |    .+..+..++-..|.+..+....+..       
T Consensus         2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~------------p----~~~~s~t~~~~~w~L~~~~s~~k~~-------   58 (541)
T KOG4547|consen    2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFA------------P----IASLSGTCTYTKWGLSADYSPMKWL-------   58 (541)
T ss_pred             CchhheEeecCCCCeEEEEEccCceeeeeec------------c----chhccCcceeEEEEEEeccchHHHH-------
Confidence            3556789999999999999988776543322            1    1111222222333321111000000       


Q ss_pred             EEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCee
Q psy2671         296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVM  372 (573)
Q Consensus       296 ~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~~  372 (573)
                       ++.|.. ..+.+...++-|...|.|.+|+...++....+.  .|.+.|.++.++.+ +.|++++.|..+..|+..+...
T Consensus        59 -~~~~~~-~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~  136 (541)
T KOG4547|consen   59 -SLEKAK-KASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVI  136 (541)
T ss_pred             -hHHHHh-hccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccccee
Confidence             000000 011233467888899999999999998887765  68899999998755 5799999999999998764432


Q ss_pred             eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc
Q psy2671         373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS  452 (573)
Q Consensus       373 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~  452 (573)
                                                                                          +++|...     
T Consensus       137 --------------------------------------------------------------------~~~~~~~-----  143 (541)
T KOG4547|consen  137 --------------------------------------------------------------------IRIWKEQ-----  143 (541)
T ss_pred             --------------------------------------------------------------------eeeeccC-----
Confidence                                                                                3344322     


Q ss_pred             eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC-----CCEEEE-EeCCCcE
Q psy2671         453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-----SRLLVS-GSADSTL  526 (573)
Q Consensus       453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d-----g~~las-~s~D~~v  526 (573)
                             +..+.+++++|||+.+++|+  +.|++||..+++.+.+|.||.++|.+++|..+     |.++.+ +..+..+
T Consensus       144 -------~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i  214 (541)
T KOG4547|consen  144 -------KPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGI  214 (541)
T ss_pred             -------CCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccce
Confidence                   33467899999999999986  68999999999999999999999999999877     666554 4566678


Q ss_pred             EEEeCCc
Q psy2671         527 KVWNMKT  533 (573)
Q Consensus       527 ~vwd~~~  533 (573)
                      .+|-+..
T Consensus       215 ~~w~v~~  221 (541)
T KOG4547|consen  215 TVWVVEK  221 (541)
T ss_pred             eEEEEEc
Confidence            8887654

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.27  E-value=5.5e-09  Score=99.22  Aligned_cols=313  Identities=17%  Similarity=0.253  Sum_probs=183.0

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe-------------
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-------------  272 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~-------------  272 (573)
                      -.-++..++|||.|.+|++...- .|.+|.......+..+. | ..|.-+.|||.+++|.+=+..+.             
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~  107 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSK  107 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCcccc
Confidence            45678899999999999887654 58999877665444433 3 35889999999999998776543             


Q ss_pred             --EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEEecCCCccEEEEE
Q psy2671         273 --IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRVLTSHTRSVTCIR  346 (573)
Q Consensus       273 --i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~~~  346 (573)
                        +.+||..+|..+.. +.+-...  .+.|.-..++.+..+.|-. -...+.++++ +...    .+.+.  ...|....
T Consensus       108 n~~~vwd~~sg~iv~s-f~~~~q~--~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~gi~dFs  180 (561)
T COG5354         108 NNVFVWDIASGMIVFS-FNGISQP--YLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVGILDFS  180 (561)
T ss_pred             CceeEEeccCceeEee-ccccCCc--ccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc--ccceeeEE
Confidence              89999998865432 2211111  1112111122222232211 2245788886 3221    11111  24566666


Q ss_pred             ECCCc---EEE-----EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         347 WGGSG---LIY-----SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       347 ~~~~~---~l~-----s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      |+|.+   .++     ..+.+.++++|.+..+..+.+..-.  .+..+                .+.|+           
T Consensus       181 isP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lf--k~~~~----------------qLkW~-----------  231 (561)
T COG5354         181 ISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLF--KVSGV----------------QLKWQ-----------  231 (561)
T ss_pred             ecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeE--eeccc----------------EEEEe-----------
Confidence            76652   222     1456677777776644333221100  00000                01111           


Q ss_pred             hhheeeeCCCCcEEEE-----------EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe--eCCCcEE
Q psy2671         419 LAKYQAQCPEGEKLVS-----------GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA--SFDKSIK  485 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~s-----------g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~--s~dg~i~  485 (573)
                              +.|+++..           --....++|++++...  +....+-.++|...+|.|.++.+++.  -.+-.+.
T Consensus       232 --------~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~--i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s  301 (561)
T COG5354         232 --------VLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS--IPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVS  301 (561)
T ss_pred             --------cCCceEEEEEEEeeecccceeccceEEEEeecccc--cceeccccccceeeeecccCCceeEEeccccccee
Confidence                    11111110           0012356676665322  22222446789999999988876654  4778899


Q ss_pred             EEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcccccc-cccCcCCCEEEEEEccCCCEEEE
Q psy2671         486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQ-DLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       486 lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~~~~-~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      ++|++.. ...-  ...+.-+.+-|||.+++++.++.|   |.+-+|+......+. .+.+-  ....++||||++++-+
T Consensus       302 ~~~lr~N-l~~~--~Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~  376 (561)
T COG5354         302 VFDLRGN-LRFY--FPEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDT  376 (561)
T ss_pred             ecccccc-eEEe--cCCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEe
Confidence            9998865 3332  233445567899999999998876   469999987765433 55543  3445799999998876


Q ss_pred             ee------CCCcEEEcc
Q psy2671         562 GG------KDKVLRLWQ  572 (573)
Q Consensus       562 ~~------~d~~i~iw~  572 (573)
                      .-      .|..|+||+
T Consensus       377 ~~ts~k~~~Dn~i~l~~  393 (561)
T COG5354         377 DTTSEKLRVDNSIKLWD  393 (561)
T ss_pred             cCCCcccccCcceEEEE
Confidence            53      366788986

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.25  E-value=3.4e-09  Score=107.51  Aligned_cols=234  Identities=20%  Similarity=0.247  Sum_probs=132.7

Q ss_pred             CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                      ...|.++|..... ...+..+...+.+.+|+|||++|+.++.+   ..|++||+.+++...  +..+...+.+..|.|  
T Consensus       169 ~~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~--~~~~~~~~~~~~~sp--  243 (417)
T TIGR02800       169 RYELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK--VASFPGMNGAPAFSP--  243 (417)
T ss_pred             cceEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE--eecCCCCccceEECC--
Confidence            3468888875443 34445566678899999999999887654   479999998875431  222333445566655  


Q ss_pred             cCCCCCEEE-EEeCCC--cEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcc
Q psy2671         305 LNHQCRRFA-SSGKDG--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH  381 (573)
Q Consensus       305 ~~~~~~~l~-s~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~  381 (573)
                         +++.|+ +.+.++  .|.+||+.++... .+..+........|+++                               
T Consensus       244 ---Dg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~d-------------------------------  288 (417)
T TIGR02800       244 ---DGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPD-------------------------------  288 (417)
T ss_pred             ---CCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCC-------------------------------
Confidence               555554 334333  3666666554322 22222222223334333                               


Q ss_pred             eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC-C--eEEEEcCCCCccceeeecc
Q psy2671         382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD-F--TLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g--~i~lwd~~~~~~~~~~~~~  458 (573)
                                                                     |+.|+..+.. +  .|+++++.+..  ...+..
T Consensus       289 -----------------------------------------------g~~l~~~s~~~g~~~iy~~d~~~~~--~~~l~~  319 (417)
T TIGR02800       289 -----------------------------------------------GKSIAFTSDRGGSPQIYMMDADGGE--VRRLTF  319 (417)
T ss_pred             -----------------------------------------------CCEEEEEECCCCCceEEEEECCCCC--EEEeec
Confidence                                                           3333332221 1  34444544322  122222


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCC---cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCC
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDK---SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMK  532 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg---~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~  532 (573)
                      +......+.|+|+|++|+.++.++   .|.+||..++.. ..+... ......+|+|||++|+.++.++   .+++.+..
T Consensus       320 ~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~  397 (417)
T TIGR02800       320 RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVSTD  397 (417)
T ss_pred             CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence            334456789999999999888776   788999887653 333222 1234568999999988877654   34555543


Q ss_pred             cccccccccCcCCCEEEEEEc
Q psy2671         533 TKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       533 ~~~~~~~l~~h~~~v~~~~~s  553 (573)
                       ++....+..+.+.+..++|+
T Consensus       398 -g~~~~~~~~~~g~~~~~~ws  417 (417)
T TIGR02800       398 -GRFRARLPLGNGDVREPAWS  417 (417)
T ss_pred             -CceeeECCCCCCCcCCCCCC
Confidence             33334444444455555553

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG0280|consensus

Probab=99.24  E-value=2.1e-09  Score=94.98  Aligned_cols=223  Identities=20%  Similarity=0.250  Sum_probs=146.7

Q ss_pred             EEEEeCCCcEEEEECCCCeEEEEecCCC------ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeE--eccCCcce
Q psy2671         312 FASSGKDGAIRIWDVILSQCVRVLTSHT------RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCR--TLEGHAHW  382 (573)
Q Consensus       312 l~s~~~dg~v~iwd~~~~~~~~~~~~h~------~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~--~~~~~~~~  382 (573)
                      ++-+..+|.|.++..........+.+-.      ....++.|+..+ .++++-.+|.+.+-+.....+.+  .+++|..+
T Consensus        88 l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E  167 (339)
T KOG0280|consen   88 LLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFE  167 (339)
T ss_pred             eeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccccccee
Confidence            5556677888888765433332222211      123456676665 58888888888865555554444  67777666


Q ss_pred             eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee-eccccc
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQ  461 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~-~~~h~~  461 (573)
                      .....++.                                    .+.+.+.+|++|+.+.-||++-.+..+.+ ..-|..
T Consensus       168 ~Wta~f~~------------------------------------~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~  211 (339)
T KOG0280|consen  168 AWTAKFSD------------------------------------KEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTS  211 (339)
T ss_pred             eeeeeccc------------------------------------CCCceEEecCCCceEEEEEecCCcceeeecceeeec
Confidence            55544432                                    12368899999999999999854443333 556788


Q ss_pred             cEEEEEECC-CCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccc--
Q psy2671         462 LINCVEFSP-DGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKI--  536 (573)
Q Consensus       462 ~v~~v~~sp-~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~--  536 (573)
                      .|.++.-+| .+.+|++|++|..|++||.|+ ++.+..-+ -.+.|+.+.++|.-. .|+.++.-+-.+|-+++.+..  
T Consensus       212 GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~  290 (339)
T KOG0280|consen  212 GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEF  290 (339)
T ss_pred             ceEEEecCCCCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEEEecccccch
Confidence            898998886 578999999999999999984 56554433 237899999999532 233344444577777765432  


Q ss_pred             ---cccccCcCCCEEEEEEccCCCEEEEee-CCCcEE-Ec
Q psy2671         537 ---EQDLPGHGDEVYAVDWAPDGEKVASGG-KDKVLR-LW  571 (573)
Q Consensus       537 ---~~~l~~h~~~v~~~~~s~d~~~l~s~~-~d~~i~-iw  571 (573)
                         ....+.|.+-++.-+|......|||++ -|+.++ +|
T Consensus       291 ~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~W  330 (339)
T KOG0280|consen  291 QIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLW  330 (339)
T ss_pred             heeeeccccccceeeccccccccceeeeeeccccceeeee
Confidence               234567777788888855555788865 566644 76

>KOG2314|consensus

Probab=99.24  E-value=5.2e-09  Score=100.28  Aligned_cols=300  Identities=18%  Similarity=0.291  Sum_probs=176.4

Q ss_pred             EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-----------CCeEEEEECC
Q psy2671         211 ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-----------NGVIHAWDSS  279 (573)
Q Consensus       211 ~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-----------dg~i~vwd~~  279 (573)
                      +-+.|||-|.+|+|--.- -|.+|--.+-..+..+. |. .|.-+.|||..+||+|=+.           ...+++||+.
T Consensus       214 tyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~  290 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA  290 (698)
T ss_pred             eeEEecCCceEEEEEecc-ceeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence            468899999999987654 48899755544444432 43 4788999999999998653           2579999999


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      +|..... +..-..  ..+.|.-+..+.+++++|.-.. ..|.||+.....++..-...-..|....|+|.+.+      
T Consensus       291 tG~lkrs-F~~~~~--~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~l------  360 (698)
T KOG2314|consen  291 TGLLKRS-FPVIKS--PYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNL------  360 (698)
T ss_pred             ccchhcc-eeccCC--CccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcce------
Confidence            9975432 111111  1223444455667788887665 56889987664433322333456777788876432      


Q ss_pred             CeEEEEeCCC--------------CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         360 RTIKVWRASD--------------GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       360 ~~i~vw~~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                        |..|-..+              ++.+++..-+.-       +           +-.+.|                   
T Consensus       361 --lAYwtpe~~~~parvtL~evPs~~~iRt~nlfnV-------s-----------DckLhW-------------------  401 (698)
T KOG2314|consen  361 --LAYWTPETNNIPARVTLMEVPSKREIRTKNLFNV-------S-----------DCKLHW-------------------  401 (698)
T ss_pred             --EEEEcccccCCcceEEEEecCccceeeeccceee-------e-----------ccEEEe-------------------
Confidence              33443322              221111111000       0           000000                   


Q ss_pred             CCCCcEEEE----------EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---CCcEEEEeCCC-
Q psy2671         426 CPEGEKLVS----------GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---DKSIKLWDGRI-  491 (573)
Q Consensus       426 ~~~~~~l~s----------g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---dg~i~lwd~~~-  491 (573)
                      ..+|.+|..          .+.-..+.|+.++....++..+ .-.+.|...+|-|.|..+++-+.   -.++.+|.+.+ 
T Consensus       402 Qk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~v-elke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~  480 (698)
T KOG2314|consen  402 QKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVV-ELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETN  480 (698)
T ss_pred             ccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceee-ecchheeeeeeccCCCeEEEEEccccccceeEEEeecC
Confidence            122333321          1111234555554433333222 22456888899999998776543   35688887663 


Q ss_pred             ---CeEEEeecCCcceEEEEEECCCCCEEEEEe---CCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         492 ---GKFITTLRGHVQAVYMVAWSSDSRLLVSGS---ADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       492 ---~~~~~~~~~h~~~v~~v~~s~dg~~las~s---~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                         .+++..+.  ....+.+.|||.|++++.+.   ..|.+.++|+.-..+... ...|. ..+.+.|.|.|+|+++++.
T Consensus       481 ~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~-~at~veWDPtGRYvvT~ss  557 (698)
T KOG2314|consen  481 IKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHF-AATEVEWDPTGRYVVTSSS  557 (698)
T ss_pred             CCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCcccc-ccccceECCCCCEEEEeee
Confidence               22334443  24567899999999988764   468899999874333221 22342 4567899999999999886


Q ss_pred             CC
Q psy2671         565 DK  566 (573)
Q Consensus       565 d~  566 (573)
                      -.
T Consensus       558 ~w  559 (698)
T KOG2314|consen  558 SW  559 (698)
T ss_pred             hh
Confidence            43

>KOG1354|consensus

Probab=99.23  E-value=1.3e-09  Score=98.29  Aligned_cols=270  Identities=20%  Similarity=0.397  Sum_probs=159.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce----ecccccCC------------cccEEEEEecccccCCCCCEEE
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ----IGQPMRGH------------KQWITALSWEPFHLNHQCRRFA  313 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~----~~~~~~~h------------~~~v~~~~~~~~~~~~~~~~l~  313 (573)
                      .-+.+|.|..+|.+||+|..+|.|.++.-+....    ....+..|            ...|..+.|.+.   .....++
T Consensus        26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~---~n~a~FL  102 (433)
T KOG1354|consen   26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDD---GNLAEFL  102 (433)
T ss_pred             cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCC---CCccEEE
Confidence            4578999999999999999999999996543221    11112222            234667777653   2345678


Q ss_pred             EEeCCCcEEEEECCCCeEEEE---e--cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe-ccCCcceeeEEE
Q psy2671         314 SSGKDGAIRIWDVILSQCVRV---L--TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNTLA  387 (573)
Q Consensus       314 s~~~dg~v~iwd~~~~~~~~~---~--~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~  387 (573)
                      ..+.|.+|++|.+........   +  .+....++++...     ..+..|-.+..      .+.+. -..|.-.|+++.
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p-----~~~~~~~~vea------~prRv~aNaHtyhiNSIS  171 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLP-----VEGRHDLEVEA------SPRRVYANAHTYHINSIS  171 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeece-----eeccccceeee------eeeeeccccceeEeeeee
Confidence            889999999998864332210   0  0111112222111     00111110000      00111 134555566665


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee--eccc-----c
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR--MTGH-----Q  460 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~--~~~h-----~  460 (573)
                      ++.|                                     ++.+.+ ++|-.|.+|+++-...+...  +..+     .
T Consensus       172 ~NsD-------------------------------------~Et~lS-ADdLRINLWnlei~d~sFnIVDIKP~nmEeLt  213 (433)
T KOG1354|consen  172 VNSD-------------------------------------KETFLS-ADDLRINLWNLEIIDQSFNIVDIKPANMEELT  213 (433)
T ss_pred             ecCc-------------------------------------cceEee-ccceeeeeccccccCCceeEEEccccCHHHHH
Confidence            5544                                     333333 46778899998754433322  2222     3


Q ss_pred             ccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeE------EEe----------ecCCcceEEEEEECCCCCEEEEEeCC
Q psy2671         461 QLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKF------ITT----------LRGHVQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       461 ~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~------~~~----------~~~h~~~v~~v~~s~dg~~las~s~D  523 (573)
                      ..|++..|+|. .+.++-.+..|+|++-|.+...+      +..          +.+-...|..+.||++|+++++-+. 
T Consensus       214 eVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-  292 (433)
T KOG1354|consen  214 EVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-  292 (433)
T ss_pred             HHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-
Confidence            45788899995 45677778899999999884321      111          1111345789999999999986532 


Q ss_pred             CcEEEEeCC-cccccccccCc------------CCCE---EEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         524 STLKVWNMK-TKKIEQDLPGH------------GDEV---YAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       524 ~~v~vwd~~-~~~~~~~l~~h------------~~~v---~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      -+|++||++ ..+.+...+-|            .+.|   ..+.||.++.+++|||-....++++
T Consensus       293 ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~  357 (433)
T KOG1354|consen  293 LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFN  357 (433)
T ss_pred             ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEec
Confidence            589999983 33333333322            2233   4688999999999999988888875

>KOG1064|consensus

Probab=99.23  E-value=7.5e-11  Score=126.67  Aligned_cols=252  Identities=15%  Similarity=0.270  Sum_probs=158.1

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEE
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS  299 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~  299 (573)
                      .....+..++...-|..+.+..  ..+.+-..|.++.-+|...+-+||+.||.|++|.-..+..+...-.+-...|+.+.
T Consensus      2181 ~~~~~~n~~~~~~tq~~~~~~~--~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~ 2258 (2439)
T KOG1064|consen 2181 NRFTPSNLPWLGSTQTSRGASV--MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSR 2258 (2439)
T ss_pred             ccCCcccCCccccceeccccee--EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhh
Confidence            3344444555555555443322  23345566888888898889999999999999988777655332222225555554


Q ss_pred             ecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC
Q psy2671         300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       300 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~  379 (573)
                      |+     ..|+.+..+..||.+-+|... .++...-..|+.......|-+ ..+++++.                     
T Consensus      2259 f~-----~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~-s~~~tag~--------------------- 2310 (2439)
T KOG1064|consen 2259 FN-----HQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG-SLLATAGR--------------------- 2310 (2439)
T ss_pred             hc-----ccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee-hhhhcccc---------------------
Confidence            43     356667777777877777764 333333344544444443322 11111110                     


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH  459 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h  459 (573)
                                                                             .++++.+.+||.-...........|
T Consensus      2311 -------------------------------------------------------s~d~~n~~lwDtl~~~~~s~v~~~H 2335 (2439)
T KOG1064|consen 2311 -------------------------------------------------------SSDNRNVCLWDTLLPPMNSLVHTCH 2335 (2439)
T ss_pred             -------------------------------------------------------CCCCCcccchhcccCcccceeeeec
Confidence                                                                   1234566777754332222222678


Q ss_pred             cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      .+.++++++-|.-++|++||.+|.|++||++..+++.+++.         +. ...++++|+..|.++||++....++..
T Consensus      2336 ~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~ 2405 (2439)
T KOG1064|consen 2336 DGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHT 2405 (2439)
T ss_pred             CCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhc
Confidence            88999999999999999999999999999988776655543         33 456899999999999999988776665


Q ss_pred             ccC---cCCC--E--EEEEEccCCCEEEEeeCCCc
Q psy2671         540 LPG---HGDE--V--YAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       540 l~~---h~~~--v--~~~~~s~d~~~l~s~~~d~~  567 (573)
                      ++.   |++-  +  ..+..- ....|.+||.|++
T Consensus      2406 ~p~e~ak~gfFr~~g~Q~~v~-~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2406 FPSEHAKQGFFRNIGMQINVG-QCNRIFSCGADGT 2439 (2439)
T ss_pred             CchhhcccchhhhcCceeeec-cCceEEEecCCCC
Confidence            542   2111  0  122222 2456888888874

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.22  E-value=1.4e-07  Score=90.05  Aligned_cols=273  Identities=13%  Similarity=0.073  Sum_probs=156.6

Q ss_pred             CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee----------CCeEEEEECCCCceecccccCCcccEE-E
Q psy2671         229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK----------NGVIHAWDSSTGKQIGQPMRGHKQWIT-A  297 (573)
Q Consensus       229 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~----------dg~i~vwd~~~~~~~~~~~~~h~~~v~-~  297 (573)
                      ++|.+.|..+.+.+..+..-..+- .+ +||||+.|+.+..          +..|.+||+.+.+.+.+...+-.-... .
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            799999999988776665322222 24 9999999887655          789999999998876443222110000 0


Q ss_pred             EEecccccCCCCCEEEEEe-C-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeE
Q psy2671         298 LSWEPFHLNHQCRRFASSG-K-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCR  374 (573)
Q Consensus       298 ~~~~~~~~~~~~~~l~s~~-~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~  374 (573)
                      ..-.-+.++++++++.... . +..|-+.|+.+++.+..+..-. +..-...+... .+..+.|+......+.+ |+ ..
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~-~~~~~~Dg~~~~v~~d~~g~-~~  181 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDT-FFMHCRDGSLAKVGYGTKGN-PK  181 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCc-cEEEeecCceEEEEecCCCc-eE
Confidence            0000122456777776554 3 7889999999888777654311 11111111111 11223333333222211 11 00


Q ss_pred             eccCCcceeeEEE-eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCcc-
Q psy2671         375 TLEGHAHWVNTLA-LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKK-  451 (573)
Q Consensus       375 ~~~~~~~~v~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~-  451 (573)
                              ..... +..+.          ...+  ..+            ...+ +|.++....+ |+|.+.|+..... 
T Consensus       182 --------~~~~~vf~~~~----------~~v~--~rP------------~~~~~dg~~~~vs~e-G~V~~id~~~~~~~  228 (352)
T TIGR02658       182 --------IKPTEVFHPED----------EYLI--NHP------------AYSNKSGRLVWPTYT-GKIFQIDLSSGDAK  228 (352)
T ss_pred             --------EeeeeeecCCc----------cccc--cCC------------ceEcCCCcEEEEecC-CeEEEEecCCCcce
Confidence                    00000 00000          0000  000            0113 5666666655 9999998644321 


Q ss_pred             ---ceeeecc-------ccccEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         452 ---SLARMTG-------HQQLINCVEFSPDGRIIASASF----------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       452 ---~~~~~~~-------h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                         ....+..       ......-++++|+++.+.+...          .+.|.++|..+++.+..+.. ...+..++++
T Consensus       229 ~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS  307 (352)
T TIGR02658       229 FLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVS  307 (352)
T ss_pred             ecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEEC
Confidence               1111111       1122334999999998887431          24799999999999888763 2468899999


Q ss_pred             CCCC-EEEEEe-CCCcEEEEeCCcccccccc
Q psy2671         512 SDSR-LLVSGS-ADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       512 ~dg~-~las~s-~D~~v~vwd~~~~~~~~~l  540 (573)
                      ||++ +|++.. .++.|.+.|..+++.++.+
T Consensus       308 ~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i  338 (352)
T TIGR02658       308 QDAKPLLYALSTGDKTLYIFDAETGKELSSV  338 (352)
T ss_pred             CCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence            9999 887666 5788999999999888776

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.22  E-value=8.6e-07  Score=96.51  Aligned_cols=382  Identities=14%  Similarity=0.234  Sum_probs=207.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe-c
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ-K  187 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  187 (573)
                      -+..|.|++||||+..||-..++++|-+-+ .+-.++.+..-....+                    .....+.+-|+ +
T Consensus       119 vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~--------------------~~~~~VsVGWGkK  177 (928)
T PF04762_consen  119 VDSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDF--------------------GESKHVSVGWGKK  177 (928)
T ss_pred             EcCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCcccc--------------------CCCceeeeccCcc
Confidence            356899999999999999999999887764 2233332221100000                    00000001010 0


Q ss_pred             eeeEEEeec-------------cccccCCCCCCCcEEEEEEcCCCCeEEEEeC---C---CeEEEEECCCCeeeEEecCC
Q psy2671         188 QAVFQVRPV-------------TRCTSSMPGHAEAVISVKFSPNGRSLASGSG---D---TTVRFWDVTTQTPLFKCEGH  248 (573)
Q Consensus       188 ~~~~~~~~~-------------~~~~~~~~gh~~~V~~~~fsp~g~~las~s~---d---~~i~iwd~~~~~~~~~~~~h  248 (573)
                      +..|+....             ..-...+. +.+.-..++|-.||+++|+.+.   .   ..+|||+-+ |....+.+.-
T Consensus       178 eTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v  255 (928)
T PF04762_consen  178 ETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPV  255 (928)
T ss_pred             cCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccC
Confidence            000100000             00112233 5556678999999999998874   2   589999954 5544444433


Q ss_pred             CCcEEEEEEcCCCCeEEEEee---CCeEEEEECCCCceecc---cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         249 KHWVLCIAWSPDSKQLVSGCK---NGVIHAWDSSTGKQIGQ---PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       249 ~~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      .+--.+++|-|.|+.||+...   ...|.+|.-+ |.+.++   +.......|..+.|++     ++..||..-.|. |.
T Consensus       256 ~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~~~~~v~~l~Wn~-----ds~iLAv~~~~~-vq  328 (928)
T PF04762_consen  256 DGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDPEEEKVIELAWNS-----DSEILAVWLEDR-VQ  328 (928)
T ss_pred             CCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCCCCceeeEEEECC-----CCCEEEEEecCC-ce
Confidence            333457899999999988765   3567777654 332222   1223456789999976     567787766554 99


Q ss_pred             EEECCCCeEEEE--ec-CCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         323 IWDVILSQCVRV--LT-SHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       323 iwd~~~~~~~~~--~~-~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      +|-..+-.....  +. .....+..+.|++..  .+...+.++.+..++..               ..++.++.      
T Consensus       329 LWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~---------------~~v~~s~~------  387 (928)
T PF04762_consen  329 LWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFA---------------WDVSRSPG------  387 (928)
T ss_pred             EEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEE---------------EEEEecCC------
Confidence            998876543211  21 122334558887643  56666665666554421               11111100      


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc----eeeeccccccEEEEEECCCCC
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS----LARMTGHQQLINCVEFSPDGR  473 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~----~~~~~~h~~~v~~v~~sp~g~  473 (573)
                                                 ..|...-++.--+..++++-.++....+    ...+ .-...|.+++|++++.
T Consensus       388 ---------------------------~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l-~~~~~v~~vaf~~~~~  439 (928)
T PF04762_consen  388 ---------------------------SSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYEL-ELPSPVNDVAFSPSNS  439 (928)
T ss_pred             ---------------------------CCccCceEEEEEeCCeEEEecccccCCCchHhceEE-cCCCCcEEEEEeCCCC
Confidence                                       0011111111112223444433322111    1111 2246799999999998


Q ss_pred             EEEEeeCCCcEEEEeCCCCe--------EEEeec----------CCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCC
Q psy2671         474 IIASASFDKSIKLWDGRIGK--------FITTLR----------GHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMK  532 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~~~--------~~~~~~----------~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~  532 (573)
                      .+|+-..||.+.+|......        ....+.          .....+..++|..+..+++....+   ..+.++++.
T Consensus       440 ~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  519 (928)
T PF04762_consen  440 RFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDID  519 (928)
T ss_pred             eEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEec
Confidence            89999999999999843321        111111          112346778888888777666554   568888874


Q ss_pred             ccc---ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         533 TKK---IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       533 ~~~---~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      ..+   .......-.+.+..+...++...++.-..||.+.
T Consensus       520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~  559 (928)
T PF04762_consen  520 DSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVF  559 (928)
T ss_pred             cCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEE
Confidence            332   1222222234455555555544355555566654

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.21  E-value=5.6e-09  Score=105.69  Aligned_cols=234  Identities=18%  Similarity=0.216  Sum_probs=129.0

Q ss_pred             eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccccC
Q psy2671         230 TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN  306 (573)
Q Consensus       230 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  306 (573)
                      .+.++|...... ..+..+...+.+..|||||+.|+..+.+   ..|.+||+.+++...  +...........|.|    
T Consensus       199 ~l~i~d~dG~~~-~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~--lt~~~g~~~~~~wSP----  271 (448)
T PRK04792        199 QLMIADYDGYNE-QMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK--VTSFPGINGAPRFSP----  271 (448)
T ss_pred             EEEEEeCCCCCc-eEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE--ecCCCCCcCCeeECC----
Confidence            677778655433 3344456678899999999998876543   268899998876421  111112223455554    


Q ss_pred             CCCCEEEE-EeCCCc--EEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeEeccCCcc
Q psy2671         307 HQCRRFAS-SGKDGA--IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCRTLEGHAH  381 (573)
Q Consensus       307 ~~~~~l~s-~~~dg~--v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~~~~~~~~  381 (573)
                       +++.++. .+.+|.  |.++|+.+++. ..+..+........|++++ .+ ++...++..                   
T Consensus       272 -DG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~-------------------  330 (448)
T PRK04792        272 -DGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKP-------------------  330 (448)
T ss_pred             -CCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCc-------------------
Confidence             6666654 455564  55556655543 2233333334445555544 12 222222221                   


Q ss_pred             eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc
Q psy2671         382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ  461 (573)
Q Consensus       382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~  461 (573)
                                                                                .++++|+.++..  ..+.....
T Consensus       331 ----------------------------------------------------------~Iy~~dl~~g~~--~~Lt~~g~  350 (448)
T PRK04792        331 ----------------------------------------------------------QIYRVNLASGKV--SRLTFEGE  350 (448)
T ss_pred             ----------------------------------------------------------eEEEEECCCCCE--EEEecCCC
Confidence                                                                      233333332221  11111111


Q ss_pred             cEEEEEECCCCCEEEEeeC-CC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC-C--cEEEEeCCccc
Q psy2671         462 LINCVEFSPDGRIIASASF-DK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD-S--TLKVWNMKTKK  535 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~-dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D-~--~v~vwd~~~~~  535 (573)
                      .....+|+|||+.|+..+. ++  .|.++|+.+++.. .+... .......|+|||+.|+..+.+ +  .+++++. .++
T Consensus       351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~  427 (448)
T PRK04792        351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGR  427 (448)
T ss_pred             CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCC
Confidence            1234689999999887654 34  3555788777542 23222 112245799999988765543 3  3677776 455


Q ss_pred             ccccccCcCCCEEEEEEcc
Q psy2671         536 IEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       536 ~~~~l~~h~~~v~~~~~s~  554 (573)
                      ..+.+..+.+.+...+|||
T Consensus       428 ~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        428 FKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             ceEECcCCCCCcCCCccCC
Confidence            5566666666778888987

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.21  E-value=5e-09  Score=106.45  Aligned_cols=235  Identities=19%  Similarity=0.260  Sum_probs=132.2

Q ss_pred             eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccccC
Q psy2671         230 TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN  306 (573)
Q Consensus       230 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  306 (573)
                      .|.++|...+.. ..+..+...+.+.+|||||++|+..+.+   ..|.+|++.++....  +......+....|+|    
T Consensus       180 ~l~~~d~~g~~~-~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~--l~~~~g~~~~~~~Sp----  252 (430)
T PRK00178        180 TLQRSDYDGARA-VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ--ITNFEGLNGAPAWSP----  252 (430)
T ss_pred             EEEEECCCCCCc-eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE--ccCCCCCcCCeEECC----
Confidence            577778765543 4444566778999999999999876644   368999998876432  222223334456655    


Q ss_pred             CCCCEEE-EEeCCC--cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeEeccCCcc
Q psy2671         307 HQCRRFA-SSGKDG--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCRTLEGHAH  381 (573)
Q Consensus       307 ~~~~~l~-s~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~~~~~~~~  381 (573)
                       +++.++ +.+.+|  .|.+||+.++... .+..+........|++++ .+ ++...++.-                   
T Consensus       253 -DG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~-------------------  311 (430)
T PRK00178        253 -DGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKP-------------------  311 (430)
T ss_pred             -CCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCc-------------------
Confidence             666665 444444  4666677665432 233333333444555544 22 222122211                   


Q ss_pred             eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc
Q psy2671         382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ  461 (573)
Q Consensus       382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~  461 (573)
                                                                                .|+++++.++..  ..+.....
T Consensus       312 ----------------------------------------------------------~iy~~d~~~g~~--~~lt~~~~  331 (430)
T PRK00178        312 ----------------------------------------------------------QIYKVNVNGGRA--ERVTFVGN  331 (430)
T ss_pred             ----------------------------------------------------------eEEEEECCCCCE--EEeecCCC
Confidence                                                                      233333322211  11110011


Q ss_pred             cEEEEEECCCCCEEEEeeCC-C--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCccc
Q psy2671         462 LINCVEFSPDGRIIASASFD-K--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKK  535 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~d-g--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~  535 (573)
                      ......|+|||+.|+..+.+ +  .|.+||+.+++.. .+.. ........|+|||++++..+.+   ..+.++++... 
T Consensus       332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~-  408 (430)
T PRK00178        332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR-  408 (430)
T ss_pred             CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC-
Confidence            12346799999999877643 3  4788898887643 2221 1122245899999998876643   34667777543 


Q ss_pred             ccccccCcCCCEEEEEEccC
Q psy2671         536 IEQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       536 ~~~~l~~h~~~v~~~~~s~d  555 (573)
                      ..+.+..+.+.+...+|+|-
T Consensus       409 ~~~~l~~~~g~~~~p~ws~~  428 (430)
T PRK00178        409 VRLPLPTAQGEVREPSWSPY  428 (430)
T ss_pred             ceEECcCCCCCcCCCccCCC
Confidence            33445555566777888873

>KOG0309|consensus

Probab=99.16  E-value=3.3e-10  Score=111.69  Aligned_cols=285  Identities=21%  Similarity=0.326  Sum_probs=185.2

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-CeeeEEecCCC--CcEEEEEEcCCC--CeEEEEeeCCeEEEEECCC-
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHK--HWVLCIAWSPDS--KQLVSGCKNGVIHAWDSST-  280 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h~--~~V~~v~~s~dg--~~l~sgs~dg~i~vwd~~~-  280 (573)
                      .+++.++..+|.|+-+|.++.-| +.+-|+.. +.+..-+ .|.  -.|-.+.|+|..  .+-++......-.+|++.. 
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l-~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s  101 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWL-HHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS  101 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceee-eccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence            35677889999999999988765 44556554 2332222 222  236667788743  3445555555667888653 


Q ss_pred             -CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-EEEEecCCCccEEEEEECC-CcEEEEEe
Q psy2671         281 -GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTRSVTCIRWGG-SGLIYSAS  357 (573)
Q Consensus       281 -~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~h~~~v~~~~~~~-~~~l~s~s  357 (573)
                       .+.+.-.+.||...|+.+.|.|.+.    ..+++++.|-.+..||+++.. ++.....-...-..++|+. ++.+++.+
T Consensus       102 s~~aIef~lhghsraitd~n~~~q~p----dVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlass  177 (1081)
T KOG0309|consen  102 SSNAIEFVLHGHSRAITDINFNPQHP----DVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASS  177 (1081)
T ss_pred             CccceEEEEecCccceeccccCCCCC----cceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhc
Confidence             3345556779999999999998643    479999999999999998653 3333333334556788864 34677778


Q ss_pred             CCCeEEEEeCCCC-eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         358 QDRTIKVWRASDG-VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       358 ~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      ..+.+++||.+.| ..+..+++|...++.+.+...                                    .-..+.+.+
T Consensus       178 hg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~------------------------------------~~s~~~s~~  221 (1081)
T KOG0309|consen  178 HGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRF------------------------------------KYSEIMSSS  221 (1081)
T ss_pred             cCCceEEEeccCCCcceEEecccceeeehHHHhhh------------------------------------hhhhhcccC
Confidence            8889999999866 456677777776666554321                                    113467888


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe--eCCCcEEE---------EeCCC-CeEEEeecCCcce
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA--SFDKSIKL---------WDGRI-GKFITTLRGHVQA  504 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~--s~dg~i~l---------wd~~~-~~~~~~~~~h~~~  504 (573)
                      .|++|+.||.++......+......+|..-.|.|=|.-...-  -.+..+.+         |+..+ .+.+.+|.||...
T Consensus       222 ~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~  301 (1081)
T KOG0309|consen  222 NDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDV  301 (1081)
T ss_pred             CCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchH
Confidence            999999999886544433333334455555666644321111  01113333         33333 3568889999988


Q ss_pred             EEEEEECCCC----------CEEEEEeCCCcEEEEeCCc
Q psy2671         505 VYMVAWSSDS----------RLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       505 v~~v~~s~dg----------~~las~s~D~~v~vwd~~~  533 (573)
                      |..+-|-..+          -.|+|-|.|.++|+|-+..
T Consensus       302 V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  302 VLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             HHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            8766554322          1689999999999998854

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.14  E-value=2.3e-08  Score=100.48  Aligned_cols=95  Identities=25%  Similarity=0.291  Sum_probs=65.1

Q ss_pred             cccEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC---CCcEEEEeCCc
Q psy2671         460 QQLINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA---DSTLKVWNMKT  533 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~---D~~v~vwd~~~  533 (573)
                      ...+....|||||+.|+..+.+   ..|.+||+.+++... +......+....|+|||++|+..+.   ...|.+||+.+
T Consensus       326 ~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~  404 (428)
T PRK01029        326 YRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLIT  404 (428)
T ss_pred             CCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCC
Confidence            3445678999999998876543   368999998887543 3322335667899999998875432   35688899987


Q ss_pred             ccccccccCcCCCEEEEEEccCC
Q psy2671         534 KKIEQDLPGHGDEVYAVDWAPDG  556 (573)
Q Consensus       534 ~~~~~~l~~h~~~v~~~~~s~d~  556 (573)
                      ++..... ...+.+...+|+|-.
T Consensus       405 g~~~~Lt-~~~g~~~~p~Ws~~~  426 (428)
T PRK01029        405 KKTRKIV-IGSGEKRFPSWGAFP  426 (428)
T ss_pred             CCEEEee-cCCCcccCceecCCC
Confidence            7654333 334556778898754

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=3.8e-08  Score=99.67  Aligned_cols=117  Identities=25%  Similarity=0.275  Sum_probs=72.9

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCC---CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCe--EEEEECC
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGD---TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGV--IHAWDSS  279 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d---~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~--i~vwd~~  279 (573)
                      +...+.+..|||||+.|+..+.+   ..|.+||+.+++.... ..........+|+|||+.|+. .+.+|.  |.++|+.
T Consensus       216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~  294 (448)
T PRK04792        216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIA  294 (448)
T ss_pred             CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECC
Confidence            45678889999999999876543   3688889988764322 212223446899999998865 455664  7788887


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEe-CCCc--EEEEECCCCe
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGA--IRIWDVILSQ  330 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~--v~iwd~~~~~  330 (573)
                      +++..  .+..+........|.|     +++.++..+ .++.  |.++|+..++
T Consensus       295 tg~~~--~lt~~~~~~~~p~wSp-----DG~~I~f~s~~~g~~~Iy~~dl~~g~  341 (448)
T PRK04792        295 TKALT--RITRHRAIDTEPSWHP-----DGKSLIFTSERGGKPQIYRVNLASGK  341 (448)
T ss_pred             CCCeE--ECccCCCCccceEECC-----CCCEEEEEECCCCCceEEEEECCCCC
Confidence            76532  2333433445566655     566665544 3444  4445555444

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.12  E-value=1.5e-08  Score=102.86  Aligned_cols=204  Identities=19%  Similarity=0.216  Sum_probs=127.6

Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC---CeEEEEeCCCCeeeEeccCCcceeeEEEeccCcee
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD---RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d---~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  394 (573)
                      ..|.++|..... .+.+..+...+....|++++ .++.++.+   ..|.+|++.++..... ..+...+...        
T Consensus       170 ~~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~-~~~~~~~~~~--------  239 (417)
T TIGR02800       170 YELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV-ASFPGMNGAP--------  239 (417)
T ss_pred             ceEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe-ecCCCCccce--------
Confidence            356777764333 34455566678888999988 44444432   4799999887643221 1111111112        


Q ss_pred             EEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEeCCC--eEEEEcCCCCccceeeeccccccEEEEEECCC
Q psy2671         395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGSDDF--TLFLWNPEKEKKSLARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~  471 (573)
                                                   .++|+|+.|+ +.+.++  .|++|++.++.  ...+..+........|+||
T Consensus       240 -----------------------------~~spDg~~l~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~s~d  288 (417)
T TIGR02800       240 -----------------------------AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ--LTRLTNGPGIDTEPSWSPD  288 (417)
T ss_pred             -----------------------------EECCCCCEEEEEECCCCCccEEEEECCCCC--EEECCCCCCCCCCEEECCC
Confidence                                         2346676665 344444  58888877543  2334444444456789999


Q ss_pred             CCEEEEeeC-CC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCCcccccccccCcCC
Q psy2671         472 GRIIASASF-DK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMKTKKIEQDLPGHGD  545 (573)
Q Consensus       472 g~~las~s~-dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~~~~~~~~l~~h~~  545 (573)
                      |+.|+..+. ++  .|.++|..+++. ..+..+...+...+|+|||++|+.++.++   .|.+||+.++.. ..+... .
T Consensus       289 g~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~  365 (417)
T TIGR02800       289 GKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-G  365 (417)
T ss_pred             CCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-C
Confidence            998876654 33  577788877654 33333445567889999999999888776   789999887543 223222 2


Q ss_pred             CEEEEEEccCCCEEEEeeCCC
Q psy2671         546 EVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      ......|+||+++|+.++.++
T Consensus       366 ~~~~p~~spdg~~l~~~~~~~  386 (417)
T TIGR02800       366 LDESPSFAPNGRMILYATTRG  386 (417)
T ss_pred             CCCCceECCCCCEEEEEEeCC
Confidence            234568999999988777654

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4190|consensus

Probab=99.11  E-value=4.2e-10  Score=107.41  Aligned_cols=218  Identities=25%  Similarity=0.403  Sum_probs=147.2

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI  273 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i  273 (573)
                      ..+.||...|..++--.+..-+++++.|++|++|.++..       .+.+++..|+.+|.++.|-.|-+++++  -||-|
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD~gi  806 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CDGGI  806 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--ccCcc
Confidence            357799999999887777778999999999999998642       356778899999999999998888765  57889


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-E
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-L  352 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~  352 (573)
                      ++||.--|+.+.+..           |.|.+           |..|                     .|.|+.--... .
T Consensus       807 HlWDPFigr~Laq~~-----------dapk~-----------~a~~---------------------~ikcl~nv~~~il  843 (1034)
T KOG4190|consen  807 HLWDPFIGRLLAQME-----------DAPKE-----------GAGG---------------------NIKCLENVDRHIL  843 (1034)
T ss_pred             eeecccccchhHhhh-----------cCccc-----------CCCc---------------------eeEecccCcchhe
Confidence            999986665443221           11100           0001                     11121111111 2


Q ss_pred             EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      ++.++...+++++|.+.+.....++                                                       
T Consensus       844 iAgcsaeSTVKl~DaRsce~~~E~k-------------------------------------------------------  868 (1034)
T KOG4190|consen  844 IAGCSAESTVKLFDARSCEWTCELK-------------------------------------------------------  868 (1034)
T ss_pred             eeeccchhhheeeecccccceeeEE-------------------------------------------------------
Confidence            3334667777777766543221111                                                       


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECC
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS  512 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~  512 (573)
                                +-+          -.+.+..+.+++..|.|+.+|.|-.+|.|.+.|.++|+.+...+.-......++ .|
T Consensus       869 ----------Vcn----------a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-ap  927 (1034)
T KOG4190|consen  869 ----------VCN----------APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-AP  927 (1034)
T ss_pred             ----------ecc----------CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-Cc
Confidence                      100          112345578999999999999999999999999999998877665444444444 46


Q ss_pred             CCCEEEEEeCCCcEEE-EeCCccccccc
Q psy2671         513 DSRLLVSGSADSTLKV-WNMKTKKIEQD  539 (573)
Q Consensus       513 dg~~las~s~D~~v~v-wd~~~~~~~~~  539 (573)
                      ..+.|+....|.++-+ |..-.+.....
T Consensus       928 sdq~L~~saldHslaVnWhaldgimh~q  955 (1034)
T KOG4190|consen  928 SDQALAQSALDHSLAVNWHALDGIMHLQ  955 (1034)
T ss_pred             hhHHHHhhcccceeEeeehhcCCeeeec
Confidence            6778888888999988 97766654433

>KOG4190|consensus

Probab=99.10  E-value=5.2e-10  Score=106.78  Aligned_cols=288  Identities=18%  Similarity=0.303  Sum_probs=178.4

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..+.||...|.+++--.+.+-++++|.|+||++|.+.......                                     
T Consensus       729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~-------------------------------------  771 (1034)
T KOG4190|consen  729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEI-------------------------------------  771 (1034)
T ss_pred             ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCcc-------------------------------------
Confidence            3577999999999988889999999999999999986431100                                     


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-----CCCCcEEEEEEc
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-----GHKHWVLCIAWS  258 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~v~~s  258 (573)
                                 ....|..+...|..+|.++.|-.+-++++++  |+.|.+||.--++++....     +..+.|.|+. +
T Consensus       772 -----------~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~-n  837 (1034)
T KOG4190|consen  772 -----------GTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLE-N  837 (1034)
T ss_pred             -----------ccceeeeEhhhccCcccceeeeeccceeeec--cCcceeecccccchhHhhhcCcccCCCceeEecc-c
Confidence                       0112444566799999999999998888775  8899999977666654321     2223355543 2


Q ss_pred             CCCCeEEEE-eeCCeEEEEECCCCceecc----cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy2671         259 PDSKQLVSG-CKNGVIHAWDSSTGKQIGQ----PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR  333 (573)
Q Consensus       259 ~dg~~l~sg-s~dg~i~vwd~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  333 (573)
                      -+...++.| +...+|+++|.+.+.-..+    ...+....+.+++..+     .|+.++.+=..|+|.+.|.++++.+.
T Consensus       838 v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~-----~GN~lAa~LSnGci~~LDaR~G~vIN  912 (1034)
T KOG4190|consen  838 VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD-----KGNKLAAALSNGCIAILDARNGKVIN  912 (1034)
T ss_pred             CcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc-----CcchhhHHhcCCcEEEEecCCCceec
Confidence            233444444 7788999999987653321    1123344556666443     57788888889999999999887654


Q ss_pred             EecCCCccEEEEEECCCcEEEEEeCCCeEEE-EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         334 VLTSHTRSVTCIRWGGSGLIYSASQDRTIKV-WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       334 ~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~v-w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                      ....-.-....++-..+..++....|+++.+ |...+|.+....+...                                
T Consensus       913 swrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~kppp--------------------------------  960 (1034)
T KOG4190|consen  913 SWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPP--------------------------------  960 (1034)
T ss_pred             cCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeeeccCCCC--------------------------------
Confidence            3322222222233233445666777888888 8766664432222110                                


Q ss_pred             hhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc---eeee--ccccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS---LARM--TGHQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~---~~~~--~~h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                       ...+.+.      .-|.-++++.....+.+|.-......   +..+  ....+..++++.-|-+.-+..|...|.|.+
T Consensus       961 -epahflq------svgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen  961 -EPAHFLQ------SVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred             -cchhhhh------ccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence             0111110      12556777777777777742211100   1111  112344677787887777777888887765

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.09  E-value=2.9e-08  Score=100.91  Aligned_cols=197  Identities=17%  Similarity=0.221  Sum_probs=118.7

Q ss_pred             CCCccccEEEEEEcCCCCeeEEeeCC---CcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         106 MPGHAEAVISVKFSPNGRSLASGSGD---TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~~lat~s~D---~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      +..|.+.+.+.+|||||+.||..+.+   ..|.+||+.+++...                                    
T Consensus       194 l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~------------------------------------  237 (430)
T PRK00178        194 LLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ------------------------------------  237 (430)
T ss_pred             EecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE------------------------------------
Confidence            33577789999999999999887654   358888887764210                                    


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEE-EeCCC--eEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS-GSGDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las-~s~d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                       .....+   .+...+|||||+.|+. .+.++  .|.+||+.++.. ..+..+........|+|
T Consensus       238 -----------------l~~~~g---~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~sp  296 (430)
T PRK00178        238 -----------------ITNFEG---LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGK  296 (430)
T ss_pred             -----------------ccCCCC---CcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEcccCCCCcCCeEECC
Confidence                             001112   2346789999998874 44444  688889988754 33444555566788999


Q ss_pred             CCCeEEEEee-CC--eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-C--cEEEEECCCCeEEE
Q psy2671         260 DSKQLVSGCK-NG--VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-G--AIRIWDVILSQCVR  333 (573)
Q Consensus       260 dg~~l~sgs~-dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-g--~v~iwd~~~~~~~~  333 (573)
                      ||+.|+..+. +|  .|.++++.+++.......+.  ......|.     ++++.++..+.+ +  .|.+||+.+++.. 
T Consensus       297 Dg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~--~~~~~~~S-----pdg~~i~~~~~~~~~~~l~~~dl~tg~~~-  368 (430)
T PRK00178        297 DGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGN--YNARPRLS-----ADGKTLVMVHRQDGNFHVAAQDLQRGSVR-  368 (430)
T ss_pred             CCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC--CccceEEC-----CCCCEEEEEEccCCceEEEEEECCCCCEE-
Confidence            9998876554 33  57777887765322111121  12223444     466777665543 3  4778898876543 


Q ss_pred             EecCCCccEEEEEECCCc-E-EEEEeCCCe--EEEEeCC
Q psy2671         334 VLTSHTRSVTCIRWGGSG-L-IYSASQDRT--IKVWRAS  368 (573)
Q Consensus       334 ~~~~h~~~v~~~~~~~~~-~-l~s~s~d~~--i~vw~~~  368 (573)
                      .+.. ........|++++ . +++...++.  |.+++..
T Consensus       369 ~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~  406 (430)
T PRK00178        369 ILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN  406 (430)
T ss_pred             EccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence            3322 1122345788877 3 444444443  4455553

>KOG1912|consensus

Probab=99.09  E-value=8e-08  Score=95.91  Aligned_cols=120  Identities=22%  Similarity=0.323  Sum_probs=88.2

Q ss_pred             CCCCCCCcEEEEEEcCCC------------CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC---CC-CeEE
Q psy2671         202 SMPGHAEAVISVKFSPNG------------RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP---DS-KQLV  265 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g------------~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~---dg-~~l~  265 (573)
                      +++-|...|+.++|.|-.            -.||++.-.|.|.+||...+..+..+..|..++..+.|-+   +. ..|+
T Consensus        50 sie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~Ll  129 (1062)
T KOG1912|consen   50 SIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLL  129 (1062)
T ss_pred             ccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeE
Confidence            344577888888887631            2567777789999999999888888888999999999865   44 3566


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      .-....++.+|+..+|....+.-.+| ....++.+.||..    +.+..-+..|.+-+-+.
T Consensus       130 aIh~ss~lvLwntdtG~k~Wk~~ys~-~iLs~f~~DPfd~----rh~~~l~s~g~vl~~~~  185 (1062)
T KOG1912|consen  130 AIHGSSTLVLWNTDTGEKFWKYDYSH-EILSCFRVDPFDS----RHFCVLGSKGFVLSCKD  185 (1062)
T ss_pred             EecCCcEEEEEEccCCceeeccccCC-cceeeeeeCCCCc----ceEEEEccCceEEEEec
Confidence            66777899999999998876654444 3466788888743    45555566676666554

>KOG1409|consensus

Probab=99.09  E-value=1.3e-08  Score=91.91  Aligned_cols=245  Identities=21%  Similarity=0.343  Sum_probs=155.3

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC--CCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG--HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~--h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                      +.+.||.+.|.+...-|-..-+++.+.|.++|||--...-.......  -...++++.+.++...|+.|-..|++.-+.+
T Consensus        18 ~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~   97 (404)
T KOG1409|consen   18 SKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFAL   97 (404)
T ss_pred             hhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEh
Confidence            45679999999999889888899999999999996433211111111  2356889999999999999998888876644


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEe
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSAS  357 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s  357 (573)
                      ..--                  +                          .....+....|...+..+.|+-. ..+++.+
T Consensus        98 sedf------------------n--------------------------km~~~r~~~~h~~~v~~~if~~~~e~V~s~~  133 (404)
T KOG1409|consen   98 SEDF------------------N--------------------------KMTFLKDYLAHQARVSAIVFSLTHEWVLSTG  133 (404)
T ss_pred             hhhh------------------h--------------------------hcchhhhhhhhhcceeeEEecCCceeEEEec
Confidence            2110                  0                          00011222345555555555433 2455666


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      .|..+.---.+.+..+                                                       |.++.... 
T Consensus       134 ~dk~~~~hc~e~~~~l-------------------------------------------------------g~Y~~~~~-  157 (404)
T KOG1409|consen  134 KDKQFAWHCTESGNRL-------------------------------------------------------GGYNFETP-  157 (404)
T ss_pred             cccceEEEeeccCCcc-------------------------------------------------------cceEeecc-
Confidence            5554432111111000                                                       11111100 


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe--CCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd--~~~~~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                             +.                  ++.|.-.  +...|...|.|.+-.  ...-..+.++.+|...+.+++|.|..+
T Consensus       158 -------~t------------------~~~~d~~--~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~  210 (404)
T KOG1409|consen  158 -------AS------------------ALQFDAL--YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQR  210 (404)
T ss_pred             -------CC------------------CCceeeE--EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCc
Confidence                   00                  0000000  112232333332221  233456788899999999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCcccc-cccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         516 LLVSGSADSTLKVWNMKTKKI-EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~~-~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|.+|..|..+-+||+-.++- ...+.+|.+.|..+...+--+.|.+++.||.|.+|+
T Consensus       211 ~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~  268 (404)
T KOG1409|consen  211 LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWN  268 (404)
T ss_pred             EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEe
Confidence            999999999999999976553 467889999999998888889999999999999997

>KOG1064|consensus

Probab=99.08  E-value=3.2e-10  Score=121.99  Aligned_cols=198  Identities=19%  Similarity=0.317  Sum_probs=151.1

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      -|-..|.++.-||-..+-+||++||.||+|....+.++....                                      
T Consensus      2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~r-------------------------------------- 2247 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFR-------------------------------------- 2247 (2439)
T ss_pred             cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEee--------------------------------------
Confidence            356778888889999999999999999999987765543210                                      


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg  267 (573)
                                     ..|. ..|+.+.|+-+|.....+.+||.+.+|... .++....+-|........|-.  ..++++
T Consensus      2248 ---------------t~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~ta 2308 (2439)
T KOG1064|consen 2248 ---------------TAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATA 2308 (2439)
T ss_pred             ---------------ccCc-chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhcc
Confidence                           1233 678889999999999999999999999976 566677788888888888864  567765


Q ss_pred             e---eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671         268 C---KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       268 s---~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  344 (573)
                      +   .++.+.+||..-..........|...++.+.+.|.+     ..|++||++|.|.+||++..+..+.+..       
T Consensus      2309 g~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~-----qllisggr~G~v~l~D~rqrql~h~~~~------- 2376 (2439)
T KOG1064|consen 2309 GRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKH-----QLLISGGRKGEVCLFDIRQRQLRHTFQA------- 2376 (2439)
T ss_pred             ccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcc-----eEEEecCCcCcEEEeehHHHHHHHHhhh-------
Confidence            4   467899999653322222236788999999998854     5799999999999999987665554432       


Q ss_pred             EEECCCcEEEEEeCCCeEEEEeCCCCeeeEec
Q psy2671         345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTL  376 (573)
Q Consensus       345 ~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~  376 (573)
                        +.....+.+|+..|.++||++..-.+++++
T Consensus      2377 --~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2377 --LDTREYFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred             --hhhhheeeccCcccceEEEEccccchhhcC
Confidence              333457899999999999999876555444

>KOG0280|consensus

Probab=99.07  E-value=3.6e-08  Score=87.39  Aligned_cols=155  Identities=15%  Similarity=0.182  Sum_probs=100.5

Q ss_pred             EEEEEEcC---CCC-eEEEEeCCCeEEEEECCCCeeeEEecCCC------CcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         210 VISVKFSP---NGR-SLASGSGDTTVRFWDVTTQTPLFKCEGHK------HWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       210 V~~~~fsp---~g~-~las~s~d~~i~iwd~~~~~~~~~~~~h~------~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ++.+.|.-   +|. .++-+-.+|.|.++..........+++-.      ....++.|++.+..++++-.+|.+.+-+..
T Consensus        72 ~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t  151 (339)
T KOG0280|consen   72 EFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYET  151 (339)
T ss_pred             cceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecc
Confidence            44445542   333 46667778899999765544333333211      124688899999999999999998844333


Q ss_pred             CCc-eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEE-ecCCCccEEEEEECCC--cEEE
Q psy2671         280 TGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRV-LTSHTRSVTCIRWGGS--GLIY  354 (573)
Q Consensus       280 ~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~-~~~h~~~v~~~~~~~~--~~l~  354 (573)
                      ... ...+..++|.-+..-..|+..    +.+.+.+||.|+.+.-||++. +..+.. ...|+..|.++.-++.  ..|+
T Consensus       152 ~~~le~vq~wk~He~E~Wta~f~~~----~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~  227 (339)
T KOG0280|consen  152 EMVLEKVQTWKVHEFEAWTAKFSDK----EPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIA  227 (339)
T ss_pred             eeeeeecccccccceeeeeeecccC----CCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEE
Confidence            222 223467788877776666543    236788999999999999983 333332 4567777877776544  2577


Q ss_pred             EEeCCCeEEEEeCC
Q psy2671         355 SASQDRTIKVWRAS  368 (573)
Q Consensus       355 s~s~d~~i~vw~~~  368 (573)
                      +|+.|-.|++||.+
T Consensus       228 TGsYDe~i~~~DtR  241 (339)
T KOG0280|consen  228 TGSYDECIRVLDTR  241 (339)
T ss_pred             Eeccccceeeeehh
Confidence            77777777777755

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.06  E-value=1e-06  Score=83.40  Aligned_cols=141  Identities=14%  Similarity=0.181  Sum_probs=106.5

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC-cEEEEeCCCCeEEEeecCCcceE
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK-SIKLWDGRIGKFITTLRGHVQAV  505 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg-~i~lwd~~~~~~~~~~~~h~~~v  505 (573)
                      .+|++++..|. |...+.+...+   .....+|...|.-..+..+++-++.|..|| .+-++|.++++ +..+...-+.|
T Consensus       330 ~~Gd~ia~VSR-GkaFi~~~~~~---~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e-~kr~e~~lg~I  404 (668)
T COG4946         330 VNGDYIALVSR-GKAFIMRPWDG---YSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE-VKRIEKDLGNI  404 (668)
T ss_pred             CCCcEEEEEec-CcEEEECCCCC---eeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce-EEEeeCCccce
Confidence            35777777665 34444443221   223346667788888888888999999999 89999998876 45556667889


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCC----cEEEcc
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK----VLRLWQ  572 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~----~i~iw~  572 (573)
                      .++..++||++++.+.....+.+.|+.+++....=+...+-|+..+|||++++||-+--+|    .|++++
T Consensus       405 ~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklyd  475 (668)
T COG4946         405 EAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYD  475 (668)
T ss_pred             EEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEe
Confidence            9999999999999998888999999999876433344456799999999999999877665    366654

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.05  E-value=3.4e-07  Score=92.03  Aligned_cols=156  Identities=18%  Similarity=0.219  Sum_probs=92.4

Q ss_pred             EEEEEEcCCCCeEEEEeC-----CCeEEEEECCCC---eeeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEE--EC
Q psy2671         210 VISVKFSPNGRSLASGSG-----DTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAW--DS  278 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~-----d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vw--d~  278 (573)
                      ....+|||||+.||..+.     |-.+.+|++.++   .+.....++.......+|+|||+.|+..+ .+|...+|  ++
T Consensus       233 ~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~  312 (428)
T PRK01029        233 QLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQI  312 (428)
T ss_pred             ccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEEC
Confidence            345789999998886653     233455776642   22222223333446779999999887665 46655555  44


Q ss_pred             CC-CceecccccCCcccEEEEEecccccCCCCCEEEEEeCC---CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-E-
Q psy2671         279 ST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD---GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-L-  352 (573)
Q Consensus       279 ~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~-  352 (573)
                      .. +... ..+..+...+....|+|     +++.++..+.+   ..|.+||+.+++... +......+....|++++ . 
T Consensus       313 ~~~g~~~-~~lt~~~~~~~~p~wSP-----DG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L  385 (428)
T PRK01029        313 DPEGQSP-RLLTKKYRNSSCPAWSP-----DGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHL  385 (428)
T ss_pred             cccccce-EEeccCCCCccceeECC-----CCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEE
Confidence            32 2111 22223334455666665     67777765443   468999998876543 33333456778999887 3 


Q ss_pred             EEEEeC--CCeEEEEeCCCCee
Q psy2671         353 IYSASQ--DRTIKVWRASDGVM  372 (573)
Q Consensus       353 l~s~s~--d~~i~vw~~~~~~~  372 (573)
                      ++++..  ...|.++++..+..
T Consensus       386 ~f~~~~~g~~~L~~vdl~~g~~  407 (428)
T PRK01029        386 VYSAGNSNESELYLISLITKKT  407 (428)
T ss_pred             EEEECCCCCceEEEEECCCCCE
Confidence            444443  34577778776644

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.04  E-value=1.8e-06  Score=84.55  Aligned_cols=239  Identities=16%  Similarity=0.307  Sum_probs=136.6

Q ss_pred             CCCEEEEEeC----CCcEEEEECCCC--eE--EEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCC-CeeeEec
Q psy2671         308 QCRRFASSGK----DGAIRIWDVILS--QC--VRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASD-GVMCRTL  376 (573)
Q Consensus       308 ~~~~l~s~~~----dg~v~iwd~~~~--~~--~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~-~~~~~~~  376 (573)
                      ++++|.+..+    +|.|..|++...  ..  +............++.++++ .++++. .++++.++++.. |.+....
T Consensus        47 ~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~  126 (345)
T PF10282_consen   47 DGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVV  126 (345)
T ss_dssp             TSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEE
T ss_pred             CCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceee
Confidence            4566665544    578888887653  22  22222233445667787766 566665 589999999876 3332211


Q ss_pred             c--CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccce
Q psy2671         377 E--GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSL  453 (573)
Q Consensus       377 ~--~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~  453 (573)
                      .  .|..      ..++                +    ..............|+++++++.. ....|.+|+.......+
T Consensus       127 ~~~~~~g------~g~~----------------~----~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l  180 (345)
T PF10282_consen  127 QTVRHEG------SGPN----------------P----DRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKL  180 (345)
T ss_dssp             EEEESEE------EESS----------------T----TTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TE
T ss_pred             eecccCC------CCCc----------------c----cccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceE
Confidence            0  0000      0000                0    000111122334568888776654 34578888876554222


Q ss_pred             ee---e-ccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCC--CCeE--EEeec---C-C--cceEEEEEECCCCCEEE
Q psy2671         454 AR---M-TGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGR--IGKF--ITTLR---G-H--VQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       454 ~~---~-~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~--~~~~--~~~~~---~-h--~~~v~~v~~s~dg~~la  518 (573)
                      ..   + ......-+.++|+|+|+++.+. -.+++|.+++..  .++.  +..+.   . .  ......++++|||++|+
T Consensus       181 ~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~ly  260 (345)
T PF10282_consen  181 TPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLY  260 (345)
T ss_dssp             EEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEE
T ss_pred             EEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEE
Confidence            11   1 1233446889999999987655 567889999877  4432  22221   1 1  12567899999999987


Q ss_pred             EEe-CCCcEEEEeCCc--ccc--cccccCcCCCEEEEEEccCCCEEEEee-CCCcEEEcc
Q psy2671         519 SGS-ADSTLKVWNMKT--KKI--EQDLPGHGDEVYAVDWAPDGEKVASGG-KDKVLRLWQ  572 (573)
Q Consensus       519 s~s-~D~~v~vwd~~~--~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~-~d~~i~iw~  572 (573)
                      ++. .+++|.+|++..  +++  +..+......-..+.++|+|++|+++. .++.|.+|+
T Consensus       261 vsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~  320 (345)
T PF10282_consen  261 VSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFD  320 (345)
T ss_dssp             EEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred             EEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEE
Confidence            765 567899999932  332  233333334478899999999998776 446787774

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.04  E-value=3.7e-06  Score=82.46  Aligned_cols=251  Identities=18%  Similarity=0.260  Sum_probs=145.4

Q ss_pred             cEEEEEEcCCCCeEEEEeC----CCeEEEEECCCC--e--eeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECC
Q psy2671         209 AVISVKFSPNGRSLASGSG----DTTVRFWDVTTQ--T--PLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSS  279 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~----d~~i~iwd~~~~--~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~  279 (573)
                      ...-++++|++++|.++..    ++.|..|++...  +  .+.........-..++++|++++|+++. .+|.|.++++.
T Consensus        38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~  117 (345)
T PF10282_consen   38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD  117 (345)
T ss_dssp             SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence            3456789999999988876    578999887653  3  2223322233446789999999999887 48999999987


Q ss_pred             CCceeccc---c----------cCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCe--EE--EEec-CCCc
Q psy2671         280 TGKQIGQP---M----------RGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQ--CV--RVLT-SHTR  340 (573)
Q Consensus       280 ~~~~~~~~---~----------~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~--~~--~~~~-~h~~  340 (573)
                      ....+...   .          +.......++.+.|     +++++.... ....|++|++....  ..  ..+. ....
T Consensus       118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-----dg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~  192 (345)
T PF10282_consen  118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-----DGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGS  192 (345)
T ss_dssp             TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-----TSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred             CCcccceeeeecccCCCCCcccccccccceeEEECC-----CCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCC
Confidence            63222111   0          01122345566554     566665542 34468888886543  21  1121 2334


Q ss_pred             cEEEEEECCCc-EEE-EEeCCCeEEEEeCC--CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         341 SVTCIRWGGSG-LIY-SASQDRTIKVWRAS--DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~-s~s~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      ..+.+.|++++ .++ +.-.+++|.++++.  ++.... .       ..+                              
T Consensus       193 GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~-~-------~~~------------------------------  234 (345)
T PF10282_consen  193 GPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTE-I-------QTI------------------------------  234 (345)
T ss_dssp             SEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE-E-------EEE------------------------------
T ss_pred             CCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeE-E-------EEe------------------------------
Confidence            56778888776 343 44457777777654  221100 0       000                              


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCC--CCe
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGR--IGK  493 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~--~~~  493 (573)
                                                  ..-.     .... .......|+++|||++|.++. .+.+|.+|++.  +++
T Consensus       235 ----------------------------~~~~-----~~~~-~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~  280 (345)
T PF10282_consen  235 ----------------------------STLP-----EGFT-GENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGT  280 (345)
T ss_dssp             ----------------------------ESCE-----TTSC-SSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTT
T ss_pred             ----------------------------eecc-----cccc-ccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCc
Confidence                                        0000     0000 012467899999999877765 56789999873  343


Q ss_pred             --EEEeecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeC--Ccccc
Q psy2671         494 --FITTLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNM--KTKKI  536 (573)
Q Consensus       494 --~~~~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~--~~~~~  536 (573)
                        .+..+......-..++++|+|++|+++. .++.|.+|++  +++++
T Consensus       281 l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l  328 (345)
T PF10282_consen  281 LTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKL  328 (345)
T ss_dssp             EEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred             eEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcE
Confidence              3333333233467899999999999887 5678999977  45554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.03  E-value=5.7e-07  Score=97.86  Aligned_cols=311  Identities=16%  Similarity=0.243  Sum_probs=177.8

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEE----ECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFW----DVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iw----d~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      ..+.|.++.|-++...++.+..+|.|.+.    +..+.. +.....-...|.|++||||+..|+..+.++++.+-... -
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-f  151 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-F  151 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-c
Confidence            45789999999999999999999999999    444322 11112234579999999999999999999988776421 1


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--------------EEEEecCCCccEEEEEE
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--------------CVRVLTSHTRSVTCIRW  347 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--------------~~~~~~~h~~~v~~~~~  347 (573)
                      ..+.+           ....+..+  .....++.|+...=.-+.-..++              ....+. +...-..+.|
T Consensus       152 d~i~E-----------~~l~~~~~--~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISW  217 (928)
T PF04762_consen  152 DPISE-----------VPLDSDDF--GESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISW  217 (928)
T ss_pred             eEEEE-----------eecCcccc--CCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEE
Confidence            11111           00000000  00122222221110000000000              001122 4456678899


Q ss_pred             CCCcEEE-EEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         348 GGSGLIY-SASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       348 ~~~~~l~-s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      -+||.++ +.+-      -+.+|+|+.+ |.+..+.+.-.+                                     +.
T Consensus       218 RGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~g-------------------------------------Le  259 (928)
T PF04762_consen  218 RGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDG-------------------------------------LE  259 (928)
T ss_pred             CCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCC-------------------------------------cc
Confidence            9998543 3332      3678999865 543322221000                                     01


Q ss_pred             heeeeCCCCcEEEEEeC---CCeEEEEcCCCCcccee--eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         421 KYQAQCPEGEKLVSGSD---DFTLFLWNPEKEKKSLA--RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~---dg~i~lwd~~~~~~~~~--~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                      ...++.|.|..+|+...   ...|.+|.-...+..-.  +.......|..+.|++|+..||.--.|. |.+|-..+....
T Consensus       260 ~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWY  338 (928)
T PF04762_consen  260 GALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWY  338 (928)
T ss_pred             CCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEE
Confidence            11234578888888764   34667776432221111  1223455789999999999999977665 999987776422


Q ss_pred             --EeecCC-cceEEEEEECCCCC-EEEEEeCCCcEEEEeC----Ccc----------------ccc--------------
Q psy2671         496 --TTLRGH-VQAVYMVAWSSDSR-LLVSGSADSTLKVWNM----KTK----------------KIE--------------  537 (573)
Q Consensus       496 --~~~~~h-~~~v~~v~~s~dg~-~las~s~D~~v~vwd~----~~~----------------~~~--------------  537 (573)
                        +.+... ...+..+.|+|... .|...+.++.+..++.    ..+                ..+              
T Consensus       339 LKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPM  418 (928)
T PF04762_consen  339 LKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPM  418 (928)
T ss_pred             EEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchH
Confidence              223211 22344588998543 4666666566654443    111                000              


Q ss_pred             --ccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         538 --QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       538 --~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                        ..+ .-...|.+++|++++..+++-..||.|.+|.
T Consensus       419 s~~~l-~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~  454 (928)
T PF04762_consen  419 SSYEL-ELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE  454 (928)
T ss_pred             hceEE-cCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence              011 1246899999999988899999999998885

>KOG4532|consensus

Probab=99.01  E-value=5.3e-08  Score=85.14  Aligned_cols=231  Identities=16%  Similarity=0.118  Sum_probs=149.0

Q ss_pred             EEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE-EEecCCCccEEEEEE-C-CCcEEEEEeCCCeEEEEeCCCCee
Q psy2671         296 TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV-RVLTSHTRSVTCIRW-G-GSGLIYSASQDRTIKVWRASDGVM  372 (573)
Q Consensus       296 ~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~h~~~v~~~~~-~-~~~~l~s~s~d~~i~vw~~~~~~~  372 (573)
                      ..+.|.|..+-..+.+|+.||..|...+|...+.+-. .....|...|+-+.- . ....+..++.|+++++.+++.+..
T Consensus        71 ~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~  150 (344)
T KOG4532|consen   71 TGMTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSN  150 (344)
T ss_pred             ecccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcc
Confidence            3455666555556778999999999999998865433 333444443332211 1 112477889999999998765432


Q ss_pred             eEeccCCcce--eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         373 CRTLEGHAHW--VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       373 ~~~~~~~~~~--v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                      ....  |...  +++++                                     .+++++.+++-++...|.+|.+....
T Consensus       151 ~~~~--h~~~~~~ns~~-------------------------------------~snd~~~~~~Vgds~~Vf~y~id~~s  191 (344)
T KOG4532|consen  151 KFAV--HNQNLTQNSLH-------------------------------------YSNDPSWGSSVGDSRRVFRYAIDDES  191 (344)
T ss_pred             ccee--eccccceeeeE-------------------------------------EcCCCceEEEecCCCcceEEEeCCcc
Confidence            2111  1111  22222                                     23667788888888888888776544


Q ss_pred             cceee--eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE-----EeecCCcceEEEEEECCCCC--EEEEEe
Q psy2671         451 KSLAR--MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI-----TTLRGHVQAVYMVAWSSDSR--LLVSGS  521 (573)
Q Consensus       451 ~~~~~--~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~-----~~~~~h~~~v~~v~~s~dg~--~las~s  521 (573)
                      ..+..  ....++.-.+..|+.....+|+++.||++.|||++.....     .+-..|.+.+..+.|++-|.  +|.-.-
T Consensus       192 ey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sE  271 (344)
T KOG4532|consen  192 EYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISE  271 (344)
T ss_pred             ceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEec
Confidence            33222  2223334567889999999999999999999999875432     12245888999999998664  455555


Q ss_pred             CCCcEEEEeCCcccccccc-------cCcC-CCEEEEEEccCCCEEEEeeCC
Q psy2671         522 ADSTLKVWNMKTKKIEQDL-------PGHG-DEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       522 ~D~~v~vwd~~~~~~~~~l-------~~h~-~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      .-+.+.+-|+++++..+.+       ..|. ..|+...|+.++..+.+.+++
T Consensus       272 hfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~  323 (344)
T KOG4532|consen  272 HFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL  323 (344)
T ss_pred             CcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccch
Confidence            5678999999988654332       2233 347778888877666555554

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.01  E-value=6.5e-07  Score=99.33  Aligned_cols=261  Identities=14%  Similarity=0.129  Sum_probs=152.2

Q ss_pred             EEEEEcCC-CCeEEEEeCCCeEEEEECCCCeeeEEecC--C------------CCcEEEEEEcCCCCeEEEEe-eCCeEE
Q psy2671         211 ISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEG--H------------KHWVLCIAWSPDSKQLVSGC-KNGVIH  274 (573)
Q Consensus       211 ~~~~fsp~-g~~las~s~d~~i~iwd~~~~~~~~~~~~--h------------~~~V~~v~~s~dg~~l~sgs-~dg~i~  274 (573)
                      ..++++++ ++..++-+.++.|++||..... +....+  .            -..-..++++++++.|+++. ..+.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~-i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNF-IVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCE-EEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            46788875 5666777788999999976543 222221  1            11246889999888766654 457899


Q ss_pred             EEECCCCceeccc--------ccCC-------cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-
Q psy2671         275 AWDSSTGKQIGQP--------MRGH-------KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-  338 (573)
Q Consensus       275 vwd~~~~~~~~~~--------~~~h-------~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-  338 (573)
                      ++|..++....-.        ..+.       -..-..+++.|    .++..+++.+.++.|++||...+... .+.+. 
T Consensus       650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp----~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G  724 (1057)
T PLN02919        650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEP----VNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDG  724 (1057)
T ss_pred             EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEec----CCCeEEEEECCCCeEEEEECCCCeEE-EEecCC
Confidence            9998765421100        0000       01123455544    13456778788899999998766432 22111 


Q ss_pred             --------------CccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCC
Q psy2671         339 --------------TRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG  402 (573)
Q Consensus       339 --------------~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~  402 (573)
                                    -.....+++++++  ++++-+.++.|++||+.++.......+...       .             
T Consensus       725 ~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~-------~-------------  784 (1057)
T PLN02919        725 YERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT-------F-------------  784 (1057)
T ss_pred             ccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc-------c-------------
Confidence                          1123456777665  334445567888888765432100000000       0             


Q ss_pred             ceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC
Q psy2671         403 GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK  482 (573)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg  482 (573)
                                              +. ...-.|..||.         ..  .....|   -..++++++|+++++-+.++
T Consensus       785 ------------------------~~-~l~~fG~~dG~---------g~--~~~l~~---P~Gvavd~dG~LYVADs~N~  825 (1057)
T PLN02919        785 ------------------------SD-NLFKFGDHDGV---------GS--EVLLQH---PLGVLCAKDGQIYVADSYNH  825 (1057)
T ss_pred             ------------------------Cc-ccccccCCCCc---------hh--hhhccC---CceeeEeCCCcEEEEECCCC
Confidence                                    00 00000001110         00  000111   35789999999999999999


Q ss_pred             cEEEEeCCCCeEEEeec-------------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         483 SIKLWDGRIGKFITTLR-------------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       483 ~i~lwd~~~~~~~~~~~-------------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      .|++||..++.......             +.......++++++|+++++-+.++.|++||+.+++.
T Consensus       826 rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        826 KIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence            99999998776442211             1122456889999999999888999999999988754

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.97  E-value=7.1e-06  Score=78.56  Aligned_cols=247  Identities=16%  Similarity=0.146  Sum_probs=133.7

Q ss_pred             EcCCCCeEEEEeC----------CCeEEEEECCCCeeeEEecCCCC-------cEEEEEEcCCCCeEEEEee--CCeEEE
Q psy2671         215 FSPNGRSLASGSG----------DTTVRFWDVTTQTPLFKCEGHKH-------WVLCIAWSPDSKQLVSGCK--NGVIHA  275 (573)
Q Consensus       215 fsp~g~~las~s~----------d~~i~iwd~~~~~~~~~~~~h~~-------~V~~v~~s~dg~~l~sgs~--dg~i~v  275 (573)
                      +||||+.|..+..          +..|.+||..+.+.+.++.-...       .-..++++|||++|+....  +..|-+
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V  132 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV  132 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence            8999998877765          78999999999998877653222       2236889999999987663  689999


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-Ce-EE---EEecCCCccEEE-EE-EC
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQ-CV---RVLTSHTRSVTC-IR-WG  348 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~-~~---~~~~~h~~~v~~-~~-~~  348 (573)
                      .|+.+++.+.+.--+....+....        ... +..-..||......+.. ++ ..   ..+......+.. -. +.
T Consensus       133 vD~~~~kvv~ei~vp~~~~vy~t~--------e~~-~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~  203 (352)
T TIGR02658       133 VDLEGKAFVRMMDVPDCYHIFPTA--------NDT-FFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSN  203 (352)
T ss_pred             EECCCCcEEEEEeCCCCcEEEEec--------CCc-cEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEc
Confidence            999998876543222222221110        001 11112333333222211 11 00   111110000000 01 22


Q ss_pred             CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         349 GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       349 ~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      .++ .++.... |+|.+.|+..........     +..+.+.           ...-.|.+...         .-.+.++
T Consensus       204 ~dg~~~~vs~e-G~V~~id~~~~~~~~~~~-----~~~~~~~-----------~~~~~wrP~g~---------q~ia~~~  257 (352)
T TIGR02658       204 KSGRLVWPTYT-GKIFQIDLSSGDAKFLPA-----IEAFTEA-----------EKADGWRPGGW---------QQVAYHR  257 (352)
T ss_pred             CCCcEEEEecC-CeEEEEecCCCcceecce-----eeecccc-----------ccccccCCCcc---------eeEEEcC
Confidence            244 4444444 888888865432111000     0000000           00000111100         0023345


Q ss_pred             CCcEEEEEe----------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEee-CCCcEEEEeCCCCeEE
Q psy2671         428 EGEKLVSGS----------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASAS-FDKSIKLWDGRIGKFI  495 (573)
Q Consensus       428 ~~~~l~sg~----------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s-~dg~i~lwd~~~~~~~  495 (573)
                      +++++....          ..+.|.++|..+.+..-....++  .+..++|+|||+ +|.+.. .++.|.+.|..+++.+
T Consensus       258 dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~--~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i  335 (352)
T TIGR02658       258 ARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH--EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKEL  335 (352)
T ss_pred             CCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC--ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEE
Confidence            666665532          12478999988765544434443  588999999999 777665 6788999999999988


Q ss_pred             Eee
Q psy2671         496 TTL  498 (573)
Q Consensus       496 ~~~  498 (573)
                      .++
T Consensus       336 ~~i  338 (352)
T TIGR02658       336 SSV  338 (352)
T ss_pred             eee
Confidence            876

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG2041|consensus

Probab=98.93  E-value=1.9e-07  Score=92.41  Aligned_cols=272  Identities=15%  Similarity=0.295  Sum_probs=166.6

Q ss_pred             cEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc--------------eecccccCCcccEEEEEecccccCCCCCEEEEEe
Q psy2671         251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK--------------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG  316 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~--------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~  316 (573)
                      ...|++|+....++|+|+.||.++|..+.+..              ...+.+.||+..|..+.|+.     ....|.|+.
T Consensus        16 kL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe-----~~QKLTtSD   90 (1189)
T KOG2041|consen   16 KLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNE-----NNQKLTTSD   90 (1189)
T ss_pred             eEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecc-----ccccccccC
Confidence            46899999999999999999999999876421              12346789999999999975     335688889


Q ss_pred             CCCcEEEEECCCCeEEEEe--cCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeee-EeccCCcceeeEEEeccCc
Q psy2671         317 KDGAIRIWDVILSQCVRVL--TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLALSTDY  392 (573)
Q Consensus       317 ~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~  392 (573)
                      .+|-|.+|-+-.+.....+  ....+.|.++.|..+| .|.....||.|.+=.+..+..- +.++|.  ....+.++   
T Consensus        91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~--~l~hv~ws---  165 (1189)
T KOG2041|consen   91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQ--LLAHVLWS---  165 (1189)
T ss_pred             CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchh--eccceeec---
Confidence            9999999988766533222  2345668899998776 4666677777655443322110 111110  01111222   


Q ss_pred             eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc------ce----eeecccccc
Q psy2671         393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK------SL----ARMTGHQQL  462 (573)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~------~~----~~~~~h~~~  462 (573)
                                                        ++.+.+..+-..|.+.++|.+....      +.    ..+......
T Consensus       166 ----------------------------------~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~k  211 (1189)
T KOG2041|consen  166 ----------------------------------EDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTK  211 (1189)
T ss_pred             ----------------------------------ccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCcc
Confidence                                              2333333344445555655432210      00    000000011


Q ss_pred             EEEEEE--------CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC---------c
Q psy2671         463 INCVEF--------SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS---------T  525 (573)
Q Consensus       463 v~~v~~--------sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~---------~  525 (573)
                      |..+.|        -||...+|++-.+|.+.|..-........+.. .-.+..+.|+++|..||.++.|.         .
T Consensus       212 ia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dt-gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~  290 (1189)
T KOG2041|consen  212 IAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDT-GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNK  290 (1189)
T ss_pred             ccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEec-ccEeecceecCCCcEEEEccCcccccCccccce
Confidence            222222        35788999999999998875443322222221 14577889999999999998753         4


Q ss_pred             EEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         526 LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       526 v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      |.+|.. -|+.+..++-....|+++.|-..|-.+|-+ .|+.|+
T Consensus       291 v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiy  332 (1189)
T KOG2041|consen  291 VHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIY  332 (1189)
T ss_pred             EEEecc-chhheEEEecCCceeeeeEEcCCceEEEEE-ecceEE
Confidence            666644 356677777777889999998777665544 355554

>KOG3914|consensus

Probab=98.93  E-value=1.8e-08  Score=93.24  Aligned_cols=106  Identities=17%  Similarity=0.237  Sum_probs=84.6

Q ss_pred             EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecc
Q psy2671         223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP  302 (573)
Q Consensus       223 as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~  302 (573)
                      -.++....+.+|....+.+ ...-||-..++.|+|+||+++|+++.+|..|++-.......+.....||+..|..++..+
T Consensus       126 dkagD~~~~di~s~~~~~~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~  204 (390)
T KOG3914|consen  126 DKAGDVYSFDILSADSGRC-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTD  204 (390)
T ss_pred             eecCCceeeeeecccccCc-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeecc
Confidence            3445567778887665433 334689999999999999999999999999999877665556566779999999988644


Q ss_pred             cccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q psy2671         303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       303 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  335 (573)
                            +..|+++|.|+++|+||+.+++++..+
T Consensus       205 ------~~~LlS~sGD~tlr~Wd~~sgk~L~t~  231 (390)
T KOG3914|consen  205 ------NYLLLSGSGDKTLRLWDITSGKLLDTC  231 (390)
T ss_pred             ------CceeeecCCCCcEEEEecccCCccccc
Confidence                  346899999999999999999876544

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.93  E-value=2.6e-06  Score=85.41  Aligned_cols=261  Identities=11%  Similarity=0.072  Sum_probs=149.3

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEE-EEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEE
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC-IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA  297 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~-v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~  297 (573)
                      +..++.++.++.+.-+|.++++.+........ +.+ -..  .+..++.++.++.+..+|.++|+.+.+...........
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~  196 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGE-ALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLR  196 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCCCc-eecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCccccc
Confidence            45677788899999999999998877654322 221 111  24467778889999999999998765432111000000


Q ss_pred             EEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC----cc------E-EEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         298 LSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT----RS------V-TCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       298 ~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~----~~------v-~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                      ..-.|..   ....++.++.+|.+..+|..+++.........    ..      + ..... .++.++.++.++.+..+|
T Consensus       197 ~~~sP~v---~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v-~~~~vy~~~~~g~l~ald  272 (394)
T PRK11138        197 GESAPAT---AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVV-VGGVVYALAYNGNLVALD  272 (394)
T ss_pred             CCCCCEE---ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEE-ECCEEEEEEcCCeEEEEE
Confidence            0001211   12345667778888888888776544322100    00      0 01111 245778888899999999


Q ss_pred             CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcC
Q psy2671         367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP  446 (573)
Q Consensus       367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~  446 (573)
                      ..+|+..-...-  ....                                       .....+..+..++.+|.+..+|.
T Consensus       273 ~~tG~~~W~~~~--~~~~---------------------------------------~~~~~~~~vy~~~~~g~l~ald~  311 (394)
T PRK11138        273 LRSGQIVWKREY--GSVN---------------------------------------DFAVDGGRIYLVDQNDRVYALDT  311 (394)
T ss_pred             CCCCCEEEeecC--CCcc---------------------------------------CcEEECCEEEEEcCCCeEEEEEC
Confidence            888754321110  0000                                       00012456777778888888887


Q ss_pred             CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE-EEECCCCCEEEEEeCCCc
Q psy2671         447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSADST  525 (573)
Q Consensus       447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~D~~  525 (573)
                      .++...............+..+  .+..|+.++.||.+...|..+|+.+...+-....+.. ..+  .+..|+.++.||.
T Consensus       312 ~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~  387 (394)
T PRK11138        312 RGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGT  387 (394)
T ss_pred             CCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCce
Confidence            7654322111100011111122  2456778899999999999999988766533222322 112  2447778899998


Q ss_pred             EEEEeC
Q psy2671         526 LKVWNM  531 (573)
Q Consensus       526 v~vwd~  531 (573)
                      |+.++.
T Consensus       388 l~~~~~  393 (394)
T PRK11138        388 VYAITR  393 (394)
T ss_pred             EEEEeC
Confidence            887754

>KOG0309|consensus

Probab=98.92  E-value=1.2e-08  Score=100.97  Aligned_cols=280  Identities=18%  Similarity=0.312  Sum_probs=166.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC-ceecccccCCc--ccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG-KQIGQPMRGHK--QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~-~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      +++.++..+|.|+-++.+++-|.+ +-|+... ... ..+ .|.  -.|....|+|..   ...+-+.......-.+|++
T Consensus        25 ~~~~a~si~p~grdi~lAsr~gl~-i~dld~p~~pp-r~l-~h~tpw~vad~qws~h~---a~~~wiVsts~qkaiiwnl   98 (1081)
T KOG0309|consen   25 GGFNAVSINPSGRDIVLASRQGLY-IIDLDDPFTPP-RWL-HHITPWQVADVQWSPHP---AKPYWIVSTSNQKAIIWNL   98 (1081)
T ss_pred             CcccceeeccccchhhhhhhcCeE-EEeccCCCCCc-eee-eccCcchhcceecccCC---CCceeEEecCcchhhhhhh
Confidence            456778899999999998887744 3344322 111 001 111  124445555522   1123333333444557776


Q ss_pred             CCC---eEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCee-eEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         327 ILS---QCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVM-CRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       327 ~~~---~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      ...   .....+-+|...|+.+.|.+..  .+++++-|..+..||++.-.. +.....                  -...
T Consensus        99 A~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~------------------w~s~  160 (1081)
T KOG0309|consen   99 AKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSS------------------WRSA  160 (1081)
T ss_pred             hcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeec------------------cccc
Confidence            432   2334567999999999998764  799999999999999875311 110000                  0000


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEee
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASAS  479 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s  479 (573)
                      ....+|+-.                  ++ .+.+.+..+.+++||.+.+..++..+++|...|+.++|.. -...+.+.+
T Consensus       161 asqVkwnyk------------------~p-~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~  221 (1081)
T KOG0309|consen  161 ASQVKWNYK------------------DP-NVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSS  221 (1081)
T ss_pred             Cceeeeccc------------------Cc-chhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccC
Confidence            011112111                  12 2333455667999999999989999999999999999875 234677889


Q ss_pred             CCCcEEEEeCCCCeE-EEeecCCcceEEEEEECCCCC--EEEEEeCCCcEEE---------EeCCc-ccccccccCcCCC
Q psy2671         480 FDKSIKLWDGRIGKF-ITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKV---------WNMKT-KKIEQDLPGHGDE  546 (573)
Q Consensus       480 ~dg~i~lwd~~~~~~-~~~~~~h~~~v~~v~~s~dg~--~las~s~D~~v~v---------wd~~~-~~~~~~l~~h~~~  546 (573)
                      .||+|+.||-..... -.....-..+|+.-++.|-|.  ++.-.-.++.+.+         |+..+ ...+..+.||.+.
T Consensus       222 ~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~  301 (1081)
T KOG0309|consen  222 NDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDV  301 (1081)
T ss_pred             CCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchH
Confidence            999999998653211 111111223555556666433  2222222334444         44333 2456788999998


Q ss_pred             EEEEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671         547 VYAVDWAPDG----------EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       547 v~~~~~s~d~----------~~l~s~~~d~~i~iw~  572 (573)
                      |...-|-..+          -+|+|=|.|.++|+|.
T Consensus       302 V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp  337 (1081)
T KOG0309|consen  302 VLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP  337 (1081)
T ss_pred             HHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence            8766665432          2699999999999995

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.89  E-value=2.8e-06  Score=85.15  Aligned_cols=307  Identities=11%  Similarity=0.067  Sum_probs=175.6

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCC--cEE-----EEEEcC--CCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH--WVL-----CIAWSP--DSKQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~--~V~-----~v~~s~--dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      +..++.++.++.+.-+|..+++.+....-...  ...     -+.-+|  ++..++.++.+|.+..+|.++|+.+.+...
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~  148 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKV  148 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccccC
Confidence            55777888889999999999988876542210  000     000011  355788888999999999999987654322


Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE-----EEEEECCCcEEEEEeCCCeEEE
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV-----TCIRWGGSGLIYSASQDRTIKV  364 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~l~s~s~d~~i~v  364 (573)
                      .  ..+.   -.|..   .+..++.+..+|.+.-+|..+++.+..........     .+... .++.++.++.++.+..
T Consensus       149 ~--~~~~---ssP~v---~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v-~~~~v~~~~~~g~v~a  219 (394)
T PRK11138        149 A--GEAL---SRPVV---SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT-AFGGAIVGGDNGRVSA  219 (394)
T ss_pred             C--Ccee---cCCEE---ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE-ECCEEEEEcCCCEEEE
Confidence            1  1111   11211   12456667788999999999988776554321110     01111 1345777888888888


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC--CCcEEEEEeCCCeEE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP--EGEKLVSGSDDFTLF  442 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~  442 (573)
                      .+..+|...-..+...         +..          .....          ... .....|  .+..+..++.+|.+.
T Consensus       220 ~d~~~G~~~W~~~~~~---------~~~----------~~~~~----------~~~-~~~~sP~v~~~~vy~~~~~g~l~  269 (394)
T PRK11138        220 VLMEQGQLIWQQRISQ---------PTG----------ATEID----------RLV-DVDTTPVVVGGVVYALAYNGNLV  269 (394)
T ss_pred             EEccCChhhheecccc---------CCC----------ccchh----------ccc-ccCCCcEEECCEEEEEEcCCeEE
Confidence            8888775432211000         000          00000          000 000001  245666777889999


Q ss_pred             EEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce-EEEEEECCCCCEEEEEe
Q psy2671         443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA-VYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       443 lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~-v~~v~~s~dg~~las~s  521 (573)
                      .+|..+++.......+.   ...+.  ..+..+..++.+|.+..+|..+|+.+.....-... ......  .+..|+.++
T Consensus       270 ald~~tG~~~W~~~~~~---~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~  342 (394)
T PRK11138        270 ALDLRSGQIVWKREYGS---VNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGD  342 (394)
T ss_pred             EEECCCCCEEEeecCCC---ccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEe
Confidence            88888765433222111   11122  24557777888999999999999876543211111 111111  245777889


Q ss_pred             CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       522 ~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .||.+...|..+++.+...+-....+.+--... +..|..++.||.|+.++
T Consensus       343 ~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~-~~~l~v~t~~G~l~~~~  392 (394)
T PRK11138        343 SEGYLHWINREDGRFVAQQKVDSSGFLSEPVVA-DDKLLIQARDGTVYAIT  392 (394)
T ss_pred             CCCEEEEEECCCCCEEEEEEcCCCcceeCCEEE-CCEEEEEeCCceEEEEe
Confidence            999999999999987755443323333211112 34788889999988764

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.88  E-value=8.1e-06  Score=77.46  Aligned_cols=138  Identities=19%  Similarity=0.264  Sum_probs=104.3

Q ss_pred             heeeeCCCCcEEEEEeCCC-eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         421 KYQAQCPEGEKLVSGSDDF-TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg-~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      +|.....+++-++.|..|| .+-++|.+++.  ..++.+.-+.|.+|..+|+|+.++.+-....+.+.|+.+|.....-+
T Consensus       363 rY~r~~~~~e~~vigt~dgD~l~iyd~~~~e--~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idk  440 (668)
T COG4946         363 RYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE--VKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDK  440 (668)
T ss_pred             EEEEEccCCcceEEeccCCceEEEEecCCce--EEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecc
Confidence            3444444556788999999 89999987653  34455555679999999999999999888889999999987554444


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCC----cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADS----TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~----~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      ...+-|+.++|||+++++|-+--+|    .|++||+.+++....-. ....-.+-+|.||+++|--
T Consensus       441 S~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT-~ta~DfsPaFD~d~ryLYf  505 (668)
T COG4946         441 SEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT-PTAYDFSPAFDPDGRYLYF  505 (668)
T ss_pred             cccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-CcccccCcccCCCCcEEEE
Confidence            5567799999999999999877665    58999999988654322 2233456688899998753

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.87  E-value=3e-09  Score=67.01  Aligned_cols=37  Identities=46%  Similarity=0.937  Sum_probs=34.3

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEee
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD  138 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd  138 (573)
                      +...+.+|.++|.+|+|+|++++||||+.|++|+|||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4456789999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.86  E-value=8.1e-06  Score=75.32  Aligned_cols=216  Identities=22%  Similarity=0.284  Sum_probs=126.3

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEe-----CCCeEEEEECC-CCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGS-----GDTTVRFWDVT-TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s-----~d~~i~iwd~~-~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      ..|.||.      .|||||++|.+.-     ..|.|-|||.. +...+.++..|.-.-..+.+.|||+.|+.+-. | |.
T Consensus        50 RHFyGHg------~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANG-G-I~  121 (305)
T PF07433_consen   50 RHFYGHG------VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANG-G-IE  121 (305)
T ss_pred             CEEecCE------EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcC-C-Cc
Confidence            4567884      5999999998874     45799999998 66677777766544456789999988876521 1 11


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE--e--cCCCccEEEEEECCC
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--L--TSHTRSVTCIRWGGS  350 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~--~~h~~~v~~~~~~~~  350 (573)
                      - ..++|+..                           |-....+-++...|..+++.+..  +  ..|..+|.-+++.++
T Consensus       122 T-hpd~GR~k---------------------------LNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~  173 (305)
T PF07433_consen  122 T-HPDSGRAK---------------------------LNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGD  173 (305)
T ss_pred             c-CcccCcee---------------------------cChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCC
Confidence            0 01111111                           11112233344445555554444  3  336677888888877


Q ss_pred             cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         351 GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       351 ~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                      |.++.+-+..                 +...                                             ..-.
T Consensus       174 G~V~~a~Q~q-----------------g~~~---------------------------------------------~~~P  191 (305)
T PF07433_consen  174 GTVAFAMQYQ-----------------GDPG---------------------------------------------DAPP  191 (305)
T ss_pred             CcEEEEEecC-----------------CCCC---------------------------------------------ccCC
Confidence            7665554321                 0000                                             0011


Q ss_pred             EEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEeecCCcceEEEEE
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITTLRGHVQAVYMVA  509 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~  509 (573)
                      .++.-..++.++........  ...   -...+-+|+++++|..+++.| ..+.+.+||..+++.+....-  ..+..++
T Consensus       192 Lva~~~~g~~~~~~~~p~~~--~~~---l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva  264 (305)
T PF07433_consen  192 LVALHRRGGALRLLPAPEEQ--WRR---LNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVA  264 (305)
T ss_pred             eEEEEcCCCcceeccCChHH--HHh---hCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc--Cceeeee
Confidence            23333333334443332111  111   234588999999998876555 778899999999998876543  3466777


Q ss_pred             ECCCCCEEEEEeC
Q psy2671         510 WSSDSRLLVSGSA  522 (573)
Q Consensus       510 ~s~dg~~las~s~  522 (573)
                      -.+++ +++|.+.
T Consensus       265 ~~~~~-f~~ssG~  276 (305)
T PF07433_consen  265 PTDDG-FLVSSGQ  276 (305)
T ss_pred             ecCCc-eEEeCCC
Confidence            77776 6666554

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.85  E-value=9.6e-08  Score=85.24  Aligned_cols=71  Identities=27%  Similarity=0.532  Sum_probs=53.1

Q ss_pred             cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-eEEEeecCCc------------ceE---EEEEECCCCCEEEEEeCC
Q psy2671         460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-KFITTLRGHV------------QAV---YMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-~~~~~~~~h~------------~~v---~~v~~s~dg~~las~s~D  523 (573)
                      ...|..+.|+++|++|++-+. -+|++||++.. .++.++.-|.            ..|   ..+.||.|.+.+.+|+..
T Consensus       280 vsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~  358 (460)
T COG5170         280 VSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYS  358 (460)
T ss_pred             hhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccc
Confidence            345888999999999998775 47999998764 4566654442            223   357899999999999988


Q ss_pred             CcEEEEeC
Q psy2671         524 STLKVWNM  531 (573)
Q Consensus       524 ~~v~vwd~  531 (573)
                      +..-+|-.
T Consensus       359 NNfgiyp~  366 (460)
T COG5170         359 NNFGIYPT  366 (460)
T ss_pred             cceeeecc
Confidence            77777653

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.84  E-value=1.6e-07  Score=83.88  Aligned_cols=275  Identities=19%  Similarity=0.326  Sum_probs=154.3

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----eeEEecCCCC------------cEEEEEEcCCCC--eEEEE
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLFKCEGHKH------------WVLCIAWSPDSK--QLVSG  267 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----~~~~~~~h~~------------~V~~v~~s~dg~--~l~sg  267 (573)
                      .+.|+++.|.-.|.+|++|...|.|.++.-....     -...+++|..            .|..+.|-.++.  .++..
T Consensus        26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls  105 (460)
T COG5170          26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS  105 (460)
T ss_pred             cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence            4679999999999999999888999999754321     1223455542            367888876554  56777


Q ss_pred             eeCCeEEEEECCCCceec--c-ccc-C-C---cccEEEEEe--cccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-c
Q psy2671         268 CKNGVIHAWDSSTGKQIG--Q-PMR-G-H---KQWITALSW--EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-T  336 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~--~-~~~-~-h---~~~v~~~~~--~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~  336 (573)
                      +.|.+|++|.+.......  + .+. + |   .+++++..-  .| .++.. ..++.+              .+.+.. .
T Consensus       106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lp-rls~h-d~iiaa--------------~p~rvyaN  169 (460)
T COG5170         106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLP-RLSEH-DEIIAA--------------KPCRVYAN  169 (460)
T ss_pred             cCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcc-ccccc-ceEEEe--------------ccceeccc
Confidence            899999999876432110  0 000 0 0   000100000  00 00000 011111              011111 3


Q ss_pred             CCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       337 ~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      .|.-.|.++.+..+...+..+.|-.|.+|++.--                                              
T Consensus       170 aH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~----------------------------------------------  203 (460)
T COG5170         170 AHPYHINSISFNSDKETLLSADDLRINLWNLEII----------------------------------------------  203 (460)
T ss_pred             cceeEeeeeeecCchheeeeccceeeeecccccc----------------------------------------------
Confidence            5777788888877776666677778888876421                                              


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeE-
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKF-  494 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~-  494 (573)
                                           |+...+-|.....     +..-...|++..|+|.. ..+.-.+..|.|++-|++...+ 
T Consensus       204 ---------------------D~sFnIVDiKP~n-----meeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alc  257 (460)
T COG5170         204 ---------------------DGSFNIVDIKPHN-----MEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALC  257 (460)
T ss_pred             ---------------------CCceEEEeccCcc-----HHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhc
Confidence                                 0111111111000     00112346677788853 3344455678888888773211 


Q ss_pred             -----EE--e--------ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc-cccccccCc------------CCC
Q psy2671         495 -----IT--T--------LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-KIEQDLPGH------------GDE  546 (573)
Q Consensus       495 -----~~--~--------~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~-~~~~~l~~h------------~~~  546 (573)
                           +.  +        +.+-...|..+.|+++|+++++-+. .+|++||.+-. .++.+++-|            .+.
T Consensus       258 dn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDa  336 (460)
T COG5170         258 DNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDA  336 (460)
T ss_pred             cCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccc
Confidence                 11  1        1122356788999999999987643 58999998754 344444322            233


Q ss_pred             E---EEEEEccCCCEEEEeeCCCcEEE
Q psy2671         547 V---YAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       547 v---~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      |   ..+.||.|.+.+.+|+-...--+
T Consensus       337 ifdkFeisfSgd~~~v~sgsy~NNfgi  363 (460)
T COG5170         337 IFDKFEISFSGDDKHVLSGSYSNNFGI  363 (460)
T ss_pred             eeeeEEEEecCCcccccccccccceee
Confidence            4   35789999888888876554333

>KOG3914|consensus

Probab=98.84  E-value=5.7e-08  Score=89.95  Aligned_cols=160  Identities=18%  Similarity=0.243  Sum_probs=113.4

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCee----eEEecCCCCcEEEEEEcCCCCeEEE---EeeCCeEEEEECCCCc
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTP----LFKCEGHKHWVLCIAWSPDSKQLVS---GCKNGVIHAWDSSTGK  282 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~----~~~~~~h~~~V~~v~~s~dg~~l~s---gs~dg~i~vwd~~~~~  282 (573)
                      +..+.++|.++++|.+..+....++++....+    +......+.+ +++.|-.+......   ++....+.+|....+.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~-~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRP-TAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCc-ceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            34556788899999888888877777654332    1121222221 33444444444433   4445566777766554


Q ss_pred             eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEeCCCe
Q psy2671         283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSASQDRT  361 (573)
Q Consensus       283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s~d~~  361 (573)
                      .  .++.||-..++.+.|.|     +.+.++++..|..||+-.......+.. +.||+.-|..++..++..|+++|.|++
T Consensus       144 ~--~~~lGhvSml~dVavS~-----D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~t  216 (390)
T KOG3914|consen  144 C--EPILGHVSMLLDVAVSP-----DDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKT  216 (390)
T ss_pred             c--chhhhhhhhhheeeecC-----CCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCc
Confidence            3  45679999999999877     568999999999999977665544444 457999999999998889999999999


Q ss_pred             EEEEeCCCCeeeEecc
Q psy2671         362 IKVWRASDGVMCRTLE  377 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~  377 (573)
                      |++||..+|+.++++.
T Consensus       217 lr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  217 LRLWDITSGKLLDTCD  232 (390)
T ss_pred             EEEEecccCCcccccc
Confidence            9999999998875543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.83  E-value=1e-05  Score=72.30  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=68.1

Q ss_pred             EEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCC---CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         213 VKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHK---HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       213 ~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~---~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ++.+++|+.||.- .|..|.|=..+..  ..+..+.-++   ..-+-++||||+..||.+...|+|+++|+...... ..
T Consensus         3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~I   80 (282)
T PF15492_consen    3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-VI   80 (282)
T ss_pred             eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeE-Ec
Confidence            5567899877765 6778877655432  2233333222   23478999999999999999999999998753321 11


Q ss_pred             ccC------CcccEEEEEecccccCCC-CCEEEEEeCCCcEEEEEC
Q psy2671         288 MRG------HKQWITALSWEPFHLNHQ-CRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       288 ~~~------h~~~v~~~~~~~~~~~~~-~~~l~s~~~dg~v~iwd~  326 (573)
                      -.+      -...|.++.|.+...+.. ...|+.-..+|.++-|-+
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v  126 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV  126 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence            111      123466666655442222 224555566666665543

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.78  E-value=4.7e-06  Score=92.66  Aligned_cols=243  Identities=16%  Similarity=0.203  Sum_probs=141.2

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEecC--C------------CccEEEEEECCC-cEEEEEe-CCCeEEEEeCCCCe
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLTS--H------------TRSVTCIRWGGS-GLIYSAS-QDRTIKVWRASDGV  371 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h------------~~~v~~~~~~~~-~~l~s~s-~d~~i~vw~~~~~~  371 (573)
                      +++.+++-...+.|+++|.... .+..+.+  .            -.....+++.++ +.++.+. ..+.|+.+|..++.
T Consensus       579 ~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~  657 (1057)
T PLN02919        579 NNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNET  657 (1057)
T ss_pred             CCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE
Confidence            3456777778888999997543 3333322  1            112456777654 4555554 45678888876653


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                      . .++.+....                    ...+.................+..| ++..+++.+.++.|++||..++.
T Consensus       658 V-~tlag~G~~--------------------g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~  716 (1057)
T PLN02919        658 V-RTLAGNGTK--------------------GSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGV  716 (1057)
T ss_pred             E-EEEeccCcc--------------------cCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCe
Confidence            2 222111000                    0000000000000000011123345 46667777888999999976543


Q ss_pred             cceee-------eccc------cccEEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeEEEeecC----------------
Q psy2671         451 KSLAR-------MTGH------QQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKFITTLRG----------------  500 (573)
Q Consensus       451 ~~~~~-------~~~h------~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~~~~~~~----------------  500 (573)
                      .....       ..++      -.....|+|+|+|+ ++++-+.++.|++||..++.......+                
T Consensus       717 v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG  796 (1057)
T PLN02919        717 TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDG  796 (1057)
T ss_pred             EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCC
Confidence            21100       0010      12346799999998 455556779999999887643211000                


Q ss_pred             -----CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-------------ccCcCCCEEEEEEccCCCEEEEe
Q psy2671         501 -----HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-------------LPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       501 -----h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-------------l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                           ....-..++++++|.++++-+.++.|++||..++.....             ..+.-.....++++++|+.+++-
T Consensus       797 ~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaD  876 (1057)
T PLN02919        797 VGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVAD  876 (1057)
T ss_pred             chhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEE
Confidence                 011235789999999888888999999999987654321             11122356789999999988888


Q ss_pred             eCCCcEEEcc
Q psy2671         563 GKDKVLRLWQ  572 (573)
Q Consensus       563 ~~d~~i~iw~  572 (573)
                      +.++.|++|+
T Consensus       877 t~Nn~Irvid  886 (1057)
T PLN02919        877 TNNSLIRYLD  886 (1057)
T ss_pred             CCCCEEEEEE
Confidence            8999999996

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.76  E-value=0.00017  Score=66.81  Aligned_cols=259  Identities=13%  Similarity=0.129  Sum_probs=146.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeC---CCeEEEEECCC--CeeeE--EecCCCCcEEEEEEcCCCCeEEEEeeC-CeEEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSG---DTTVRFWDVTT--QTPLF--KCEGHKHWVLCIAWSPDSKQLVSGCKN-GVIHAW  276 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~---d~~i~iwd~~~--~~~~~--~~~~h~~~V~~v~~s~dg~~l~sgs~d-g~i~vw  276 (573)
                      .+.+.++=++|+|++++|.++-.   +|.|.-|.+..  |+.-+  .......+-..++++++|++|+++... |.|.++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~  116 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY  116 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence            34567788999999999988754   46777777664  43321  111122233678999999999988754 678888


Q ss_pred             ECCC-CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE
Q psy2671         277 DSST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY  354 (573)
Q Consensus       277 d~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~  354 (573)
                      -+.. |... .        +..+.-                        +...+.-.++-   +..+.+..+.+++ .++
T Consensus       117 p~~~dG~l~-~--------~v~~~~------------------------h~g~~p~~rQ~---~~h~H~a~~tP~~~~l~  160 (346)
T COG2706         117 PLQADGSLQ-P--------VVQVVK------------------------HTGSGPHERQE---SPHVHSANFTPDGRYLV  160 (346)
T ss_pred             EcccCCccc-c--------ceeeee------------------------cCCCCCCcccc---CCccceeeeCCCCCEEE
Confidence            6643 2111 0        000000                        00000000111   1225566677777 444


Q ss_pred             EEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         355 SAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       355 s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      +.. .--.|.+|++.+|.+...-..                                  .....+-.++..++|++++..
T Consensus       161 v~DLG~Dri~~y~~~dg~L~~~~~~----------------------------------~v~~G~GPRHi~FHpn~k~aY  206 (346)
T COG2706         161 VPDLGTDRIFLYDLDDGKLTPADPA----------------------------------EVKPGAGPRHIVFHPNGKYAY  206 (346)
T ss_pred             EeecCCceEEEEEcccCcccccccc----------------------------------ccCCCCCcceEEEcCCCcEEE
Confidence            433 233577888877654321110                                  001111234455678887765


Q ss_pred             EEe-CCCeEEEEcCCCCccceeeec---------cccccEEEEEECCCCCEEEEeeC-CCcEEEEeCC--CCeE--EEee
Q psy2671         434 SGS-DDFTLFLWNPEKEKKSLARMT---------GHQQLINCVEFSPDGRIIASASF-DKSIKLWDGR--IGKF--ITTL  498 (573)
Q Consensus       434 sg~-~dg~i~lwd~~~~~~~~~~~~---------~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~--~~~~--~~~~  498 (573)
                      ... -+++|.+|........+..+.         ........|.++|||++|.++-. ...|.++.+.  ++++  +...
T Consensus       207 ~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~  286 (346)
T COG2706         207 LVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGIT  286 (346)
T ss_pred             EEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEe
Confidence            444 578899988766422222221         11234678899999999987642 2356676543  3432  2222


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeCCC-cEEEEeCCc
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSADS-TLKVWNMKT  533 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~D~-~v~vwd~~~  533 (573)
                      ..+...-..+.|+++|++|+++..++ .|.+|.+..
T Consensus       287 ~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~  322 (346)
T COG2706         287 PTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDK  322 (346)
T ss_pred             ccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence            33334456788999999999888654 688987743

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.72  E-value=3.3e-08  Score=62.18  Aligned_cols=39  Identities=46%  Similarity=0.966  Sum_probs=36.7

Q ss_pred             CeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ++++.++++|...|++++|+|++.+|++++.|++|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            367889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG4532|consensus

Probab=98.71  E-value=5.2e-06  Score=72.99  Aligned_cols=234  Identities=12%  Similarity=0.072  Sum_probs=135.3

Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      ..+||.|+..|...+|...+.....+.-..|...|+-+.   - .....-.+..++.|.++++.++..+.....+-...-
T Consensus        84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~---r-~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~  159 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVK---R-YCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNL  159 (344)
T ss_pred             ccEEEeccccceeeeecccCcccceeeecccccchhhhh---h-hcccccceeeccCCcceeEEEEecCcccceeecccc
Confidence            347999999999999998765433222222222221110   0 000112355678888988888754433222211112


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .+..+.+++++ .+.+.+....|-.|.+.+....         +...        ....+.+.++               
T Consensus       160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey---------~~~~--------~~a~t~D~gF---------------  207 (344)
T KOG4532|consen  160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEY---------IENI--------YEAPTSDHGF---------------  207 (344)
T ss_pred             ceeeeEEcCCCceEEEecCCCcceEEEeCCccce---------eeee--------EecccCCCce---------------
Confidence            36778888777 5667777788888876543211         0000        0011111111               


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee----eeccccccEEEEEECCCCC--EEEEeeCCCcEEEEeCCCCe
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA----RMTGHQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGK  493 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~----~~~~h~~~v~~v~~sp~g~--~las~s~dg~i~lwd~~~~~  493 (573)
                        +..++.....+|++.+||++.+||.+....+..    .-..|.+.+..+.|++-|.  +|...-.-+.+.+.|.++++
T Consensus       208 --~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~  285 (344)
T KOG4532|consen  208 --YNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV  285 (344)
T ss_pred             --eeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence              122334567899999999999999987654432    2235889999999998664  34444445789999999986


Q ss_pred             EEEeec-------CCc-ceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         494 FITTLR-------GHV-QAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       494 ~~~~~~-------~h~-~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ..+.+.       .|. +.++.-.|+.++.-+.+.+.+ .+.-|++.+
T Consensus       286 ~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~s  332 (344)
T KOG4532|consen  286 NHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILS  332 (344)
T ss_pred             eeeEEecCccccccccccccccccccCCCcccccccch-hhheeeccc
Confidence            544332       232 236666777766665555443 244455543

>KOG4714|consensus

Probab=98.64  E-value=9.4e-07  Score=77.21  Aligned_cols=63  Identities=24%  Similarity=0.381  Sum_probs=54.9

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCC
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~  491 (573)
                      ...+++|++||.+-+||.+....+...+..|..++..|-|+| ++..|.+++.||.+..||..+
T Consensus       192 q~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  192 QHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            356788889999999999887666777888999999999999 678899999999999999765

>KOG2695|consensus

Probab=98.62  E-value=1e-07  Score=86.41  Aligned_cols=129  Identities=16%  Similarity=0.216  Sum_probs=101.0

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe----eeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCC
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT----PLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ....|.++.|...+..+..|+..|.|...|++.+.    .....--|...|+|+..-. ++++|.+.+++|.|++||.+.
T Consensus       251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            35678899999989999999999999999998751    1222335778888887665 788999999999999999886


Q ss_pred             Ccee--cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         281 GKQI--GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       281 ~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      -++.  .....||   |...++.|++.......++++|.|-..|||.+..+..+..+..
T Consensus       331 ~K~~~~V~qYeGH---vN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf  386 (425)
T KOG2695|consen  331 TKCKKSVMQYEGH---VNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF  386 (425)
T ss_pred             hhcccceeeeecc---cccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence            5541  1234455   5556677888887888899999999999999998887776653

>KOG4714|consensus

Probab=98.60  E-value=3.5e-07  Score=79.85  Aligned_cols=146  Identities=16%  Similarity=0.264  Sum_probs=93.4

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-----CCcEEEEeCCCCeEEEeecCC
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-----DKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-----dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      ..+..++++..||.+.+++.+.......++..-...-.+..+-..+.++.++..     -+..+.|+.+..+.+..-.-.
T Consensus        99 ~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~  178 (319)
T KOG4714|consen   99 MTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKA  178 (319)
T ss_pred             ccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccc
Confidence            346789999999999999876532222222111111112222234455554432     123455555443322111111


Q ss_pred             cceEEEEEECCCC-CEEEEEeCCCcEEEEeCCcccc-cccccCcCCCEEEEEEccC-CCEEEEeeCCCcEEEcc
Q psy2671         502 VQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKTKKI-EQDLPGHGDEVYAVDWAPD-GEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       502 ~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~~~~-~~~l~~h~~~v~~~~~s~d-~~~l~s~~~d~~i~iw~  572 (573)
                      ...|.+++-+|.. +.+++|+.||.+-+||.+.... ...+..|..+++.+-|+|. +..|+++++||.+..|+
T Consensus       179 ~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wd  252 (319)
T KOG4714|consen  179 LDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWD  252 (319)
T ss_pred             cccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEc
Confidence            2348888888865 4677888999999999988754 4567889999999999995 56799999999999997

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.59  E-value=4.6e-05  Score=70.65  Aligned_cols=224  Identities=18%  Similarity=0.180  Sum_probs=129.1

Q ss_pred             CCeEEEEECCCCeeeEEecCC--CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc-ccEEEEEecccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGH--KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK-QWITALSWEPFH  304 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h--~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~~~~~  304 (573)
                      +++|..||..+++.+....--  .....+. ..+++.++++++.++.+..||..+|+.+.+...... ...      |  
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~------~--   72 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA------P--   72 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG------E--
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce------e--
Confidence            689999999999988876431  1222221 223566788889999999999999987643221111 110      1  


Q ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCC-----ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccC
Q psy2671         305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHT-----RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG  378 (573)
Q Consensus       305 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~-----~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~  378 (573)
                       ...+..+..++.++.++.+|..+++..... ....     .......+. .+.++.+..++.|..+|+++|..+-....
T Consensus        73 -~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~  150 (238)
T PF13360_consen   73 -VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPV  150 (238)
T ss_dssp             -EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred             -eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence             012345666778889999999999877663 2211     011112222 34567777788888888877765433221


Q ss_pred             CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       379 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                      ...                                              .+                    ......+  
T Consensus       151 ~~~----------------------------------------------~~--------------------~~~~~~~--  162 (238)
T PF13360_consen  151 GEP----------------------------------------------RG--------------------SSPISSF--  162 (238)
T ss_dssp             STT-----------------------------------------------S--------------------S--EEEE--
T ss_pred             CCC----------------------------------------------CC--------------------Ccceeee--
Confidence            100                                              00                    0000000  


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCc-EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKS-IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~-i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                        ..+..-.+..++ .+..++.++. +.+ |..+++.+....  ...+..+ ...++..|+.++.++.|..||+++++.+
T Consensus       163 --~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~  235 (238)
T PF13360_consen  163 --SDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVV  235 (238)
T ss_dssp             --TTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred             --cccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence              001111122244 5555666665 555 999998654333  2222221 3467778888889999999999998754

...

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.57  E-value=0.00041  Score=64.60  Aligned_cols=209  Identities=19%  Similarity=0.221  Sum_probs=124.4

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC-CCcEEEEEeCCCeEEEEeCCCCeeeEeccC-----Ccce
Q psy2671         309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEG-----HAHW  382 (573)
Q Consensus       309 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~-----~~~~  382 (573)
                      +.++.+.-..+.|..|+...+.... +....  ...+++. +++.++.+...+. .++|..++........     ....
T Consensus        12 g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~~~~~~~~~~~~~~~   87 (246)
T PF08450_consen   12 GRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVTVLADLPDGGVPFNR   87 (246)
T ss_dssp             TEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTSEEEEEETTCE-EEEETTTTEEEEEEEEETTCSCTEE
T ss_pred             CEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCCEEEEEEcCce-EEEecCCCcEEEEeeccCCCcccCC
Confidence            4455665567888889887765433 22222  5555555 6788888877555 4448887754332221     2233


Q ss_pred             eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC--------CeEEEEcCCCCcccee
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD--------FTLFLWNPEKEKKSLA  454 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--------g~i~lwd~~~~~~~~~  454 (573)
                      .+.+++.++                                     |.+.++....        |.+..++.. ..  ..
T Consensus        88 ~ND~~vd~~-------------------------------------G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~--~~  127 (246)
T PF08450_consen   88 PNDVAVDPD-------------------------------------GNLYVTDSGGGGASGIDPGSVYRIDPD-GK--VT  127 (246)
T ss_dssp             EEEEEE-TT-------------------------------------S-EEEEEECCBCTTCGGSEEEEEEETT-SE--EE
T ss_pred             CceEEEcCC-------------------------------------CCEEEEecCCCccccccccceEEECCC-Ce--EE
Confidence            444554443                                     4433433322        445556655 21  11


Q ss_pred             eeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCC--C-----eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcE
Q psy2671         455 RMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRI--G-----KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL  526 (573)
Q Consensus       455 ~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~--~-----~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v  526 (573)
                      .+...-...+.++|+|+++.|. +-+..+.|..++...  .     +.+..+....+..-.+++..+|++.++....+.|
T Consensus       128 ~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I  207 (246)
T PF08450_consen  128 VVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRI  207 (246)
T ss_dssp             EEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEE
T ss_pred             EEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEE
Confidence            1222233468899999998765 557788888888742  2     1122233333346678999999988887788899


Q ss_pred             EEEeCCcccccccccCcCCCEEEEEEc-cCCCEEEEe
Q psy2671         527 KVWNMKTKKIEQDLPGHGDEVYAVDWA-PDGEKVASG  562 (573)
Q Consensus       527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s-~d~~~l~s~  562 (573)
                      .+++.+ ++.+..+.-....+++++|. ++.+.|...
T Consensus       208 ~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  208 VVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             EEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred             EEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence            999988 77666554444589999994 666666543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.53  E-value=0.00022  Score=66.46  Aligned_cols=218  Identities=16%  Similarity=0.226  Sum_probs=127.2

Q ss_pred             EEEEEcC-CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy2671         253 LCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC  331 (573)
Q Consensus       253 ~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  331 (573)
                      .+.+|.+ ++..+++--..+.|..|+..++........+    ..++.+..    .+ ..++.+...+ +.++|..+++.
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~----~~G~~~~~----~~-g~l~v~~~~~-~~~~d~~~g~~   72 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG----PNGMAFDR----PD-GRLYVADSGG-IAVVDPDTGKV   72 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS----EEEEEEEC----TT-SEEEEEETTC-EEEEETTTTEE
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC----CceEEEEc----cC-CEEEEEEcCc-eEEEecCCCcE
Confidence            3578887 6666666667899999999887653222222    34444431    23 3455555544 55569888755


Q ss_pred             EEEecC-----CCccEEEEEECCCcEEEEEeCC---------CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         332 VRVLTS-----HTRSVTCIRWGGSGLIYSASQD---------RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       332 ~~~~~~-----h~~~v~~~~~~~~~~l~s~s~d---------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      ......     .....+.+++.++|.++.+...         +.|..++.. +....... .....+.++++        
T Consensus        73 ~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s--------  142 (246)
T PF08450_consen   73 TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFS--------  142 (246)
T ss_dssp             EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEE--------
T ss_pred             EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEEC--------
Confidence            443332     3456788899988876665432         234444443 22211111 11122333333        


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCCCCcc------ceeeeccccccEEEEEECC
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPEKEKK------SLARMTGHQQLINCVEFSP  470 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~~~~~------~~~~~~~h~~~v~~v~~sp  470 (573)
                                                   |+++.| ++-+..+.|..+++.....      ....+.......-.+++++
T Consensus       143 -----------------------------~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~  193 (246)
T PF08450_consen  143 -----------------------------PDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS  193 (246)
T ss_dssp             -----------------------------TTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT
T ss_pred             -----------------------------CcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC
Confidence                                         556544 4556677788887753322      1112222222367899999


Q ss_pred             CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE-CCCCCEEEEE
Q psy2671         471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSG  520 (573)
Q Consensus       471 ~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~-s~dg~~las~  520 (573)
                      +|++.++....+.|.++|.+ |+.+..+......+++++| .++.+.|...
T Consensus       194 ~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  194 DGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             TS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred             CCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence            99998888888999999987 8888877655557899999 4666655543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG0882|consensus

Probab=98.53  E-value=1.4e-06  Score=81.97  Aligned_cols=261  Identities=19%  Similarity=0.225  Sum_probs=165.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC--C-eeeEEecCCCCcEEEEEEcCCCCeEEEEee-CCeEEEEECCC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT--Q-TPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSST  280 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~--~-~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~~  280 (573)
                      -|++.|+.+..+. .+++.+++.||.++.|--..  + +-+..+..|...+.+++.+.||..+.|.+. |..++++|+++
T Consensus         7 mhrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn   85 (558)
T KOG0882|consen    7 MHRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN   85 (558)
T ss_pred             cccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence            3777777765543 45899999999999997543  2 223445678888999999999999999777 99999999876


Q ss_pred             Cceec----ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCCccEEEEEECCCc-EE
Q psy2671         281 GKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWGGSG-LI  353 (573)
Q Consensus       281 ~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~-~l  353 (573)
                      -..+.    ..+.+...|+++    |  .......-++.-.+|.+.++|-....  ....-.-|..+|.++.+.+.+ .+
T Consensus        86 ~DminmiKL~~lPg~a~wv~s----k--Gd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~  159 (558)
T KOG0882|consen   86 FDMINMIKLVDLPGFAEWVTS----K--GDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA  159 (558)
T ss_pred             cchhhhcccccCCCceEEecC----C--CCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccce
Confidence            54321    122333333221    1  00001223344567889999976543  223345689999999998766 46


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      .+....|.|.-|.....  .+-                                                   |+++.  
T Consensus       160 vSiD~~gmVEyWs~e~~--~qf---------------------------------------------------Pr~~l--  184 (558)
T KOG0882|consen  160 VSIDISGMVEYWSAEGP--FQF---------------------------------------------------PRTNL--  184 (558)
T ss_pred             eeccccceeEeecCCCc--ccC---------------------------------------------------ccccc--
Confidence            66677888999976520  000                                                   00000  


Q ss_pred             EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-------------
Q psy2671         434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-------------  500 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-------------  500 (573)
                               .|.+......+ .+........++.|+|+|..+++-+.|..|++++.++|+.++.+..             
T Consensus       185 ---------~~~~K~eTdLy-~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y  254 (558)
T KOG0882|consen  185 ---------NFELKHETDLY-GFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPY  254 (558)
T ss_pred             ---------cccccccchhh-cccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhcccccc
Confidence                     11111111111 1111223457899999999999999999999999988876543321             


Q ss_pred             -------------------Ccc-eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc
Q psy2671         501 -------------------HVQ-AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       501 -------------------h~~-~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~  538 (573)
                                         |.. .-..+.|...|++|+-|+.=| |++.++.++...+
T Consensus       255 ~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~r  311 (558)
T KOG0882|consen  255 GLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVR  311 (558)
T ss_pred             ccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEE
Confidence                               111 123467788899998877654 8888888766544

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=98.53  E-value=0.00054  Score=63.52  Aligned_cols=272  Identities=14%  Similarity=0.219  Sum_probs=152.2

Q ss_pred             CCeEEEEECCC--CceecccccCCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCC--CeEEEE--ecCCCc
Q psy2671         270 NGVIHAWDSST--GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVIL--SQCVRV--LTSHTR  340 (573)
Q Consensus       270 dg~i~vwd~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~--~~~~~~--~~~h~~  340 (573)
                      +.-|.+|++.+  |+.....+..+....+-+.|+|     +.++|-++..   +|.|--|.+..  ++....  ...-..
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~-----~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~   89 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNP-----DQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGS   89 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECC-----CCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCC
Confidence            35688888763  2222122234445566666665     4455655533   56666665543  433221  111122


Q ss_pred             cEEEEEECCCc-EEEEEeC-CCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQ-DRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~-d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      +-+.++.+.++ .++++.. .+.|.++.+++ |.+....        .+..+                 ....+.+....
T Consensus        90 ~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v--------~~~~h-----------------~g~~p~~rQ~~  144 (346)
T COG2706          90 PPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVV--------QVVKH-----------------TGSGPHERQES  144 (346)
T ss_pred             CCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccce--------eeeec-----------------CCCCCCccccC
Confidence            33677888777 6666654 67888887754 3221100        00000                 00001111222


Q ss_pred             hhhheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccce---eeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCC-
Q psy2671         418 ALAKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSL---ARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRI-  491 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~---~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~-  491 (573)
                      ....+....|+++++++..- --.|.+|++..++...   ..+ .....-+.|.|+|++++...- -.+++|.+|.... 
T Consensus       145 ~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~  223 (346)
T COG2706         145 PHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA  223 (346)
T ss_pred             CccceeeeCCCCCEEEEeecCCceEEEEEcccCcccccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence            23344556688988877653 2357888887543211   111 122335789999999987654 4689999997665 


Q ss_pred             -Ce--EEEee---cC---CcceEEEEEECCCCCEEEEEeC-CCcEEEEeCCc--ccc--cccccCcCCCEEEEEEccCCC
Q psy2671         492 -GK--FITTL---RG---HVQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKT--KKI--EQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       492 -~~--~~~~~---~~---h~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~--~~~--~~~l~~h~~~v~~~~~s~d~~  557 (573)
                       ++  .++.+   ..   -..+...+..++||++|.++.. ...|-+|.+..  +++  +.....+...-....|+++++
T Consensus       224 ~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~  303 (346)
T COG2706         224 VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGR  303 (346)
T ss_pred             CceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCC
Confidence             32  22222   11   1245678899999999987753 34788887754  332  222233333346788999999


Q ss_pred             EEEEeeCCC-cEEEcc
Q psy2671         558 KVASGGKDK-VLRLWQ  572 (573)
Q Consensus       558 ~l~s~~~d~-~i~iw~  572 (573)
                      +|+.++.++ .|.+|.
T Consensus       304 ~Liaa~q~sd~i~vf~  319 (346)
T COG2706         304 FLIAANQKSDNITVFE  319 (346)
T ss_pred             EEEEEccCCCcEEEEE
Confidence            999888764 466653

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.49  E-value=0.00013  Score=67.59  Aligned_cols=211  Identities=15%  Similarity=0.139  Sum_probs=129.6

Q ss_pred             CCcEEEEECCCCeEEEEecCC--CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeE
Q psy2671         318 DGAIRIWDVILSQCVRVLTSH--TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR  395 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  395 (573)
                      +|+|..||..+++.+.....-  .....+.....++.+++++.++.|..||..+|+..-...........          
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~----------   71 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGA----------   71 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSG----------
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccce----------
Confidence            678888999888877665431  22223223445678888899999999999999765433221000000          


Q ss_pred             EEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc---ccEEEEEECCCC
Q psy2671         396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ---QLINCVEFSPDG  472 (573)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~sp~g  472 (573)
                                                   ....+..++.+..++.++.+|..++...........   ..........++
T Consensus        72 -----------------------------~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~  122 (238)
T PF13360_consen   72 -----------------------------PVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDG  122 (238)
T ss_dssp             -----------------------------EEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEET
T ss_pred             -----------------------------eeecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEec
Confidence                                         002345667777888999999887765444211110   111222333347


Q ss_pred             CEEEEeeCCCcEEEEeCCCCeEEEeecCCcce----------EEEEEECCCCCEEEEEeCCCc-EEEEeCCccccccccc
Q psy2671         473 RIIASASFDKSIKLWDGRIGKFITTLRGHVQA----------VYMVAWSSDSRLLVSGSADST-LKVWNMKTKKIEQDLP  541 (573)
Q Consensus       473 ~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~----------v~~v~~s~dg~~las~s~D~~-v~vwd~~~~~~~~~l~  541 (573)
                      ..++.+..++.+..+|+++|+.+.........          +..-....++ .+..++.++. +.+ |+.+++.+-...
T Consensus       123 ~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~  200 (238)
T PF13360_consen  123 DRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGEKLWSKP  200 (238)
T ss_dssp             TEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTEEEEEEC
T ss_pred             CEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCCEEEEec
Confidence            78888888999999999999988776543311          1222223345 6666777775 555 999988553222


Q ss_pred             CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         542 GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       542 ~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                        ...+..+ ...++..|+.++.++.|..|+
T Consensus       201 --~~~~~~~-~~~~~~~l~~~~~~~~l~~~d  228 (238)
T PF13360_consen  201 --ISGIYSL-PSVDGGTLYVTSSDGRLYALD  228 (238)
T ss_dssp             --SS-ECEC-EECCCTEEEEEETTTEEEEEE
T ss_pred             --CCCccCC-ceeeCCEEEEEeCCCEEEEEE
Confidence              1223331 456778888888899998876

...

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.49  E-value=0.00036  Score=64.66  Aligned_cols=104  Identities=21%  Similarity=0.319  Sum_probs=64.0

Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCc-------EEEEeCCCCeEEEeec-------CCcceEEEEEECCCCCEEEEEe-CC
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKS-------IKLWDGRIGKFITTLR-------GHVQAVYMVAWSSDSRLLVSGS-AD  523 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~-------i~lwd~~~~~~~~~~~-------~h~~~v~~v~~s~dg~~las~s-~D  523 (573)
                      |..+|..++++++|..+...-..|-       +-+++.  ++.+..+.       .-.+-+-+|++++++.++++.| .-
T Consensus       161 ~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG  238 (305)
T PF07433_consen  161 HQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG  238 (305)
T ss_pred             cccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC
Confidence            4445666777777665554433332       223321  11122121       1224577899999999886655 67


Q ss_pred             CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       524 ~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                      +.+.+||..+++.+....-  ..++.++-.+++ +++|.|....
T Consensus       239 g~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~-f~~ssG~G~~  279 (305)
T PF07433_consen  239 GRVAVWDAATGRLLGSVPL--PDACGVAPTDDG-FLVSSGQGQL  279 (305)
T ss_pred             CEEEEEECCCCCEeecccc--CceeeeeecCCc-eEEeCCCccE
Confidence            7899999999988765542  356778777766 7777766543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.47  E-value=0.00012  Score=73.38  Aligned_cols=93  Identities=8%  Similarity=0.075  Sum_probs=51.5

Q ss_pred             cEEEEEEcCCCCe-EEEEee---CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEE-EEeCC--CcEEE
Q psy2671         251 WVLCIAWSPDSKQ-LVSGCK---NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA-SSGKD--GAIRI  323 (573)
Q Consensus       251 ~V~~v~~s~dg~~-l~sgs~---dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-s~~~d--g~v~i  323 (573)
                      ....-.|+|||+. ++..+.   +..|.++|+.+|+...  +...........|.|     +++.++ +.+.+  ..|.+
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~--lt~~~g~~~~~~~SP-----DG~~la~~~~~~g~~~Iy~  261 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK--IASSQGMLVVSDVSK-----DGSKLLLTMAPKGQPDIYL  261 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE--EecCCCcEEeeEECC-----CCCEEEEEEccCCCcEEEE
Confidence            5678899999985 654443   3568999998876432  222333344555655     565554 33334  45666


Q ss_pred             EECCCCeEEEEecCCCccEEEEEECCCc
Q psy2671         324 WDVILSQCVRVLTSHTRSVTCIRWGGSG  351 (573)
Q Consensus       324 wd~~~~~~~~~~~~h~~~v~~~~~~~~~  351 (573)
                      +|+..+... .+..+........|+++|
T Consensus       262 ~dl~~g~~~-~LT~~~~~d~~p~~SPDG  288 (419)
T PRK04043        262 YDTNTKTLT-QITNYPGIDVNGNFVEDD  288 (419)
T ss_pred             EECCCCcEE-EcccCCCccCccEECCCC
Confidence            676655432 233222222234566555

>KOG2695|consensus

Probab=98.45  E-value=2.6e-07  Score=83.81  Aligned_cols=136  Identities=15%  Similarity=0.173  Sum_probs=100.9

Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC-----eEEEeecCCcceEEE
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG-----KFITTLRGHVQAVYM  507 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~-----~~~~~~~~h~~~v~~  507 (573)
                      ++.+.+-.+-+-|.+++.....   .....|.++.|...+.++..|..+|.|...|++.+     .+...+ -|...|++
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf---~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvts  303 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSF---QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTS  303 (425)
T ss_pred             ecccccceeEEEEeeccccccc---ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhh
Confidence            5555666677777766532211   12345778889888999999999999999999875     222333 37788888


Q ss_pred             EEECC-CCCEEEEEeCCCcEEEEeCCcccc---cccccCcCCCEEEEE--EccCCCEEEEeeCCCcEEEcc
Q psy2671         508 VAWSS-DSRLLVSGSADSTLKVWNMKTKKI---EQDLPGHGDEVYAVD--WAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       508 v~~s~-dg~~las~s~D~~v~vwd~~~~~~---~~~l~~h~~~v~~~~--~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +..-. ++++|.+.+.+|+|++||.+--++   +..+.||...-..+-  ..+....++++|.|+..|||.
T Consensus       304 lq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWs  374 (425)
T KOG2695|consen  304 LQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWS  374 (425)
T ss_pred             hhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEe
Confidence            87666 788999999999999999987666   778888865433332  345667899999999999996

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.44  E-value=9.5e-05  Score=74.00  Aligned_cols=179  Identities=15%  Similarity=0.117  Sum_probs=104.4

Q ss_pred             cEEEEEECCCcE--EEEEeCC---CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         341 SVTCIRWGGSGL--IYSASQD---RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       341 ~v~~~~~~~~~~--l~s~s~d---~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      ......|++++.  ++..+.+   ..|.++|+.++....... .........                            
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~----------------------------  239 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSD----------------------------  239 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeE----------------------------
Confidence            667889999873  5544443   457777887765432211 111111122                            


Q ss_pred             hhhhhheeeeCCCCcEEEE-EeCC--CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CC--cEEEEeC
Q psy2671         416 KHALAKYQAQCPEGEKLVS-GSDD--FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DK--SIKLWDG  489 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~s-g~~d--g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg--~i~lwd~  489 (573)
                               ++|+|+.++. .+.+  ..|.++|+..+.  ...+..+........|+|||+.|+-.+. .+  .|.++|+
T Consensus       240 ---------~SPDG~~la~~~~~~g~~~Iy~~dl~~g~--~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl  308 (419)
T PRK04043        240 ---------VSKDGSKLLLTMAPKGQPDIYLYDTNTKT--LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL  308 (419)
T ss_pred             ---------ECCCCCEEEEEEccCCCcEEEEEECCCCc--EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence                     3466665543 3323  467777776543  3334433332335689999998776653 33  5777788


Q ss_pred             CCCeEEEeec-CCcceEEEEEECCCCCEEEEEeCC---------CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEE
Q psy2671         490 RIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSAD---------STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV  559 (573)
Q Consensus       490 ~~~~~~~~~~-~h~~~v~~v~~s~dg~~las~s~D---------~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l  559 (573)
                      .+++..+... +.    ....|||||++|+-.+..         ..|.+.|+.++.. +.+... .......|+|||+.|
T Consensus       309 ~~g~~~rlt~~g~----~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~SPDG~~I  382 (419)
T PRK04043        309 NSGSVEQVVFHGK----NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRFSSDGGSI  382 (419)
T ss_pred             CCCCeEeCccCCC----cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEECCCCCEE
Confidence            8776533322 22    124899999998866543         2578888877754 333322 223357899999988


Q ss_pred             EEeeCC
Q psy2671         560 ASGGKD  565 (573)
Q Consensus       560 ~s~~~d  565 (573)
                      +-.+.+
T Consensus       383 ~f~~~~  388 (419)
T PRK04043        383 MFIKYL  388 (419)
T ss_pred             EEEEcc
Confidence            765543

>KOG0882|consensus

Probab=98.32  E-value=4.4e-06  Score=78.68  Aligned_cols=205  Identities=16%  Similarity=0.192  Sum_probs=136.7

Q ss_pred             CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCCccEEEEEECCCcE-EEEEeC-CCeEEEE
Q psy2671         291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCVRVLTSHTRSVTCIRWGGSGL-IYSASQ-DRTIKVW  365 (573)
Q Consensus       291 h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~-d~~i~vw  365 (573)
                      |.+.|+.+.-.      ..+.+.+++-||.++.|.-..-   +.++.+..|...|.+++.+-++. +.|.+. |+.++++
T Consensus         8 hrd~i~hv~~t------ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~Kvf   81 (558)
T KOG0882|consen    8 HRDVITHVFPT------KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVF   81 (558)
T ss_pred             ccceeeeEeee------hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEE
Confidence            55666655321      3467899999999999975431   23344567788888888888885 455566 9999999


Q ss_pred             eCCCCeeeE-----eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         366 RASDGVMCR-----TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       366 ~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      |+.+-.+..     .+.+...|+++                      +..                +-...-++.-.++.
T Consensus        82 DvEn~DminmiKL~~lPg~a~wv~s----------------------kGd----------------~~s~IAVs~~~sg~  123 (558)
T KOG0882|consen   82 DVENFDMINMIKLVDLPGFAEWVTS----------------------KGD----------------KISLIAVSLFKSGK  123 (558)
T ss_pred             EeeccchhhhcccccCCCceEEecC----------------------CCC----------------eeeeEEeecccCCC
Confidence            987543321     11111111110                      000                00122334456788


Q ss_pred             EEEEcCCCCcc-ceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-C-----eEEEe---------ecCCcce
Q psy2671         441 LFLWNPEKEKK-SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-G-----KFITT---------LRGHVQA  504 (573)
Q Consensus       441 i~lwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~-----~~~~~---------~~~h~~~  504 (573)
                      +.++|...... ....-.-|..+|.++.++|-+..+++....|.|.-|.... .     +....         +..-+..
T Consensus       124 i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~  203 (558)
T KOG0882|consen  124 IFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTE  203 (558)
T ss_pred             cEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccC
Confidence            99998765442 3334445889999999999999999999999999998762 1     11111         1122345


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      ..++.|+|+|..+++-+.|..|++++.+++++++.
T Consensus       204 pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqe  238 (558)
T KOG0882|consen  204 PTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQE  238 (558)
T ss_pred             ccceEEccccCcccccCcccEEEEEEeccchhhhh
Confidence            67899999999999999999999999999876543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.30  E-value=0.00091  Score=60.18  Aligned_cols=103  Identities=16%  Similarity=0.222  Sum_probs=57.2

Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC---CCCCEEEEEeCCC------cEEEE
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADS------TLKVW  529 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s---~dg~~las~s~D~------~v~vw  529 (573)
                      +...|.++.|+|.-++|++||....      +.+.    -++....+++-..-   |..+.+ +...|+      +-.+|
T Consensus       146 yp~Gi~~~vy~p~h~LLlVgG~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v-~~~~~~~~~~~~~~~~~  214 (282)
T PF15492_consen  146 YPHGINSAVYHPKHRLLLVGGCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQV-TSSEDDITASSKRRGLL  214 (282)
T ss_pred             CCCceeEEEEcCCCCEEEEeccCCC------CCcc----ccccccCceEEEEcCCCCcEEEc-cccCcccccccccccee
Confidence            3556999999998888887764322      0000    00111122221111   221111 122221      12344


Q ss_pred             eCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       530 d~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+-+.+.........+.|..+..||||+.||+...+|.|.+|+
T Consensus       215 ~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~  257 (282)
T PF15492_consen  215 RIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWE  257 (282)
T ss_pred             eccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence            4433332222233457899999999999999999999999996

>KOG1275|consensus

Probab=98.27  E-value=2e-05  Score=80.88  Aligned_cols=142  Identities=17%  Similarity=0.320  Sum_probs=107.4

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC---------CcEEEEeCCCCeEEEe
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD---------KSIKLWDGRIGKFITT  497 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d---------g~i~lwd~~~~~~~~~  497 (573)
                      .++..+.+|...|+|.+-|+.+. +....+..|++.|..  |+-.|++|+++|..         .-|++||+++.+.+..
T Consensus       185 ~Nnr~lf~G~t~G~V~LrD~~s~-~~iht~~aHs~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~P  261 (1118)
T KOG1275|consen  185 YNNRNLFCGDTRGTVFLRDPNSF-ETIHTFDAHSGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSP  261 (1118)
T ss_pred             ecCcEEEeecccceEEeecCCcC-ceeeeeeccccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhhccCC
Confidence            34678999999999999998764 456778899988865  55678899998864         4489999999887776


Q ss_pred             ecCCcceEEEEEECCC-CCEEEEEeCCCcEEEEeCCccc----ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         498 LRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~d-g~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.-+.++ .-+.|.|. ...+|+++..|...+-|..+-.    ..+-....+..+.++++|++++.+|.+..+|.|.+|.
T Consensus       262 I~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  262 IQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             cccccCc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence            6666544 34677775 3467788888999988843211    1222233345599999999999999999999999995

>KOG1920|consensus

Probab=98.25  E-value=0.00052  Score=73.22  Aligned_cols=232  Identities=15%  Similarity=0.216  Sum_probs=126.9

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec-c
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG-Q  286 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~-~  286 (573)
                      +.|.++.|..+...++.+..+|.|.+-|..+... .....-...|.+++||||++.++-.+.++++.+-.-. -..+. +
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~-f~~i~E~  146 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-EIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKD-FEPIAEK  146 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEcccccce-eeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecc-ccchhcc
Confidence            6899999999999899999999999998776432 1112234579999999999999988888877654321 11110 1


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-----eEEEEec--C---CCccEEEEEECCCcEEEEE
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-----QCVRVLT--S---HTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~--~---h~~~v~~~~~~~~~~l~s~  356 (573)
                      ++.....              ....+++.|+...=.-+.-..+     +.....+  +   -...-+.+.|-++|.+++.
T Consensus       147 ~L~~d~~--------------~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAV  212 (1265)
T KOG1920|consen  147 PLDADDE--------------RKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAV  212 (1265)
T ss_pred             ccccccc--------------cccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEE
Confidence            1100000              0011233332221101100000     0000000  0   1223357899999954443


Q ss_pred             -----eCC-CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         357 -----SQD-RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       357 -----s~d-~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                           -.+ +.|++||.+ |.+-.+-......-.+                                     ..+.|.|.
T Consensus       213 s~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~-------------------------------------LsWkPsgs  254 (1265)
T KOG1920|consen  213 SFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHS-------------------------------------LSWKPSGS  254 (1265)
T ss_pred             EEEeccCCceeEEEeccc-chhhcccCcccccccc-------------------------------------eeecCCCC
Confidence                 244 899999976 4332211111110011                                     12336677


Q ss_pred             EEEEEe---CCCeEEEEcCCCCcc--ceeeeccccccEEEEEECCCCCEEEE---eeCCCcEEEEeCCCCe
Q psy2671         431 KLVSGS---DDFTLFLWNPEKEKK--SLARMTGHQQLINCVEFSPDGRIIAS---ASFDKSIKLWDGRIGK  493 (573)
Q Consensus       431 ~l~sg~---~dg~i~lwd~~~~~~--~~~~~~~h~~~v~~v~~sp~g~~las---~s~dg~i~lwd~~~~~  493 (573)
                      .+++..   .|..|.+|.......  ...........+..++|+.++.+||+   ......|++|-..+..
T Consensus       255 ~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  255 LIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             eEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence            777654   345788887443211  11112223344899999999999997   5555569999876543

>KOG1832|consensus

Probab=98.23  E-value=1.5e-06  Score=88.29  Aligned_cols=187  Identities=19%  Similarity=0.276  Sum_probs=128.6

Q ss_pred             EEEEecCCCccEEEEEECCC-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         331 CVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       331 ~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      ..+.+..|+...+|++|+.+ ..++.|+..|.|+++++.+|........|...++.+-.+.+                  
T Consensus      1093 ~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~d------------------ 1154 (1516)
T KOG1832|consen 1093 SWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVD------------------ 1154 (1516)
T ss_pred             cchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCC------------------
Confidence            34566778889999999865 58999999999999999999998888889888776655543                  


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEE-EeCCC-eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVS-GSDDF-TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW  487 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~s-g~~dg-~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw  487 (573)
                                         |..+.+ .+... -..+|+..........+.    .-.++.|+..-+.=+.|..-..+.+|
T Consensus      1155 -------------------gs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~Y 1211 (1516)
T KOG1832|consen 1155 -------------------GSTQLTSSSSSSPLSALWDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLY 1211 (1516)
T ss_pred             -------------------cceeeeeccccCchHHHhccccccCcccccc----ccceeehhhhHHHHHhcccccceEEE
Confidence                               332222 22222 356788765433333332    23578998876555566666779999


Q ss_pred             eCCCCeEEEe-ecC---CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         488 DGRIGKFITT-LRG---HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       488 d~~~~~~~~~-~~~---h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      |++++..+.+ +.+   ....-+++.|||+..++.   .||  .+||++..+.+..+...+..+.. .|+|.|..++..+
T Consensus      1212 DvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~~G-~FHP~g~eVIINS 1285 (1516)
T KOG1832|consen 1212 DVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYGGG-GFHPSGNEVIINS 1285 (1516)
T ss_pred             ecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCc--eeeeeccHHHHhhhhhheecccc-cccCCCceEEeec
Confidence            9999877666 222   222346789999998887   455  58999888777666544433322 4888888877665


Q ss_pred             C
Q psy2671         564 K  564 (573)
Q Consensus       564 ~  564 (573)
                      +
T Consensus      1286 E 1286 (1516)
T KOG1832|consen 1286 E 1286 (1516)
T ss_pred             h
Confidence            3

>KOG1645|consensus

Probab=98.17  E-value=0.00019  Score=67.11  Aligned_cols=80  Identities=19%  Similarity=0.358  Sum_probs=68.8

Q ss_pred             CCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECC
Q psy2671         202 SMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~  279 (573)
                      .+++|...|..++|||..+ .+..++.+..|+|.|+.+...+..+..| ..+++++|.-|.. +|+.|-..|.|.+||++
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R  266 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR  266 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence            4678999999999999877 6788999999999999998888777777 6789999987654 67888899999999997


Q ss_pred             CCc
Q psy2671         280 TGK  282 (573)
Q Consensus       280 ~~~  282 (573)
                      ...
T Consensus       267 ~~~  269 (463)
T KOG1645|consen  267 QPE  269 (463)
T ss_pred             CCC
Confidence            643

>KOG1275|consensus

Probab=98.10  E-value=9.5e-05  Score=76.10  Aligned_cols=182  Identities=14%  Similarity=0.178  Sum_probs=123.8

Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ++..++-|+....+...|.++.+.....-.+ ...|.-++.       +++.+.+|...|+|-+-|..+.+.++.+..|+
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~-a~~v~imR~-------Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs  217 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVS-ASGVTIMRY-------NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHS  217 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeecc-CCceEEEEe-------cCcEEEeecccceEEeecCCcCceeeeeeccc
Confidence            3456777777778888888877654321111 112444442       45778899999999999999999999999999


Q ss_pred             ccEEEEEECCCcEEEEEe---------CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         340 RSVTCIRWGGSGLIYSAS---------QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       340 ~~v~~~~~~~~~~l~s~s---------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      +.|..+...++ .+++++         .|.-|++||++.-+.+..++-+...        +                   
T Consensus       218 ~siSDfDv~GN-lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P--------~-------------------  269 (1118)
T KOG1275|consen  218 GSISDFDVQGN-LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP--------Q-------------------  269 (1118)
T ss_pred             cceeeeeccCC-eEEEeecccccccccccchhhhhhhhhhhccCCcccccCc--------h-------------------
Confidence            99999888765 555655         3556889998865544333222110        0                   


Q ss_pred             chhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCC---CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         411 PEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEK---EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~---~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                                 +....| -...++.++..|...+-|+.+   .......+......+..+.+|++|+.+|.|..+|.|.+
T Consensus       270 -----------flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~  338 (1118)
T KOG1275|consen  270 -----------FLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNL  338 (1118)
T ss_pred             -----------hhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEee
Confidence                       000111 135688888999998888433   22222333333445899999999999999999999999


Q ss_pred             Ee
Q psy2671         487 WD  488 (573)
Q Consensus       487 wd  488 (573)
                      |-
T Consensus       339 wa  340 (1118)
T KOG1275|consen  339 WA  340 (1118)
T ss_pred             ec
Confidence            96

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.08  E-value=0.0079  Score=62.03  Aligned_cols=285  Identities=16%  Similarity=0.189  Sum_probs=149.1

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCC------cEE--EEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccC
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH------WVL--CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG  290 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~------~V~--~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~  290 (573)
                      +..+..++.++.+.-.|..+++.+........      .+.  .++.. ++..++.++.+|.|.-+|.++|+.+.+....
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            34566777889999999999988776543221      010  11111 2257888999999999999999877543221


Q ss_pred             Ccc-cEEEEEecccccCCCCCEEEEEe---------CCCcEEEEECCCCeEEEEecCCCcc-------------------
Q psy2671         291 HKQ-WITALSWEPFHLNHQCRRFASSG---------KDGAIRIWDVILSQCVRVLTSHTRS-------------------  341 (573)
Q Consensus       291 h~~-~v~~~~~~~~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~h~~~-------------------  341 (573)
                      ... .-..+.-.|..   .+..++.++         .+|.+.-+|..+++.+-........                   
T Consensus       140 ~~~~~~~~i~ssP~v---~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~  216 (488)
T cd00216         140 DQVPPGYTMTGAPTI---VKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGG  216 (488)
T ss_pred             CCcCcceEecCCCEE---ECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCC
Confidence            110 00011112211   112333332         3678888898888776554321110                   


Q ss_pred             -E-EEEEEC-CCcEEEEEeCCC------------------eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         342 -V-TCIRWG-GSGLIYSASQDR------------------TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       342 -v-~~~~~~-~~~~l~s~s~d~------------------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                       + ...... ..+.++.++.++                  .|.-.|..+|+..=..+.-......+.....         
T Consensus       217 ~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~---------  287 (488)
T cd00216         217 TSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQ---------  287 (488)
T ss_pred             CccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCC---------
Confidence             0 011222 235677776555                  4555555555443221100000000000000         


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS  477 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las  477 (573)
                                +      .+..  ...-++   ..++.++.+|.+...|.++++..-..-..    ...++.+| +...+.
T Consensus       288 ----------p------~~~~--~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~----~~~~~~~~-~~vyv~  344 (488)
T cd00216         288 ----------P------SLAD--IKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV----EQPMAYDP-GLVYLG  344 (488)
T ss_pred             ----------C------eEEe--ccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee----ccccccCC-ceEEEc
Confidence                      0      0000  000112   25777888999999998887654322111    11233444 222221


Q ss_pred             -----------------eeCCCcEEEEeCCCCeEEEeecCCc--------ceE--EEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         478 -----------------ASFDKSIKLWDGRIGKFITTLRGHV--------QAV--YMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       478 -----------------~s~dg~i~lwd~~~~~~~~~~~~h~--------~~v--~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                                       ...+|.+.-.|..+|+.+.......        ...  ..++  ..+..|+.++.|+.++.+|
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald  422 (488)
T cd00216         345 AFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFD  422 (488)
T ss_pred             cccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEE
Confidence                             1246778888999888776554220        011  1122  2456888889999999999


Q ss_pred             CCccccccccc
Q psy2671         531 MKTKKIEQDLP  541 (573)
Q Consensus       531 ~~~~~~~~~l~  541 (573)
                      .++++.+-+.+
T Consensus       423 ~~tG~~lW~~~  433 (488)
T cd00216         423 ATTGKELWKFR  433 (488)
T ss_pred             CCCCceeeEEE
Confidence            99999875544

The alignment model contains an 8-bladed beta-propeller.

>KOG1832|consensus

Probab=98.08  E-value=3.3e-06  Score=85.98  Aligned_cols=201  Identities=17%  Similarity=0.239  Sum_probs=132.1

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      +.-+++..|+..-+|++|+-+.++|+.|+..|.|+++++.+|...                                   
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e----------------------------------- 1136 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSME----------------------------------- 1136 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccc-----------------------------------
Confidence            344677889999999999999999999999999999999988542                                   


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCC--eEEEEECCC-CeeeEEecCCCCcEEEEEE
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDT--TVRFWDVTT-QTPLFKCEGHKHWVLCIAW  257 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~--~i~iwd~~~-~~~~~~~~~h~~~V~~v~~  257 (573)
                                          .+..+|..+|+-+.-+.||..+++.+.-.  -..+|++.. +.+.+.+.+    -.++.|
T Consensus      1137 --------------------~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~e----d~~vkF 1192 (1516)
T KOG1832|consen 1137 --------------------ESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTGGPRHSFDE----DKAVKF 1192 (1516)
T ss_pred             --------------------ccccccccccccccccCCcceeeeeccccCchHHHhccccccCccccccc----cceeeh
Confidence                                22447999999999999999877665443  467899864 334444433    367889


Q ss_pred             cCCCCeEEEEeeCCeEEEEECCCCceecccccCCc---ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK---QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       258 s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      +...+.-+.|+....+.+||+.++..+...+.+.-   -.-....|+|     ....++   +||  .+||.+..+.++.
T Consensus      1193 sn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP-----~D~LIl---ndG--vLWDvR~~~aIh~ 1262 (1516)
T KOG1832|consen 1193 SNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP-----CDTLIL---NDG--VLWDVRIPEAIHR 1262 (1516)
T ss_pred             hhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC-----CcceEe---eCc--eeeeeccHHHHhh
Confidence            87665556666667899999999876544333211   1112333443     333333   455  4699887776666


Q ss_pred             ecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEec
Q psy2671         335 LTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL  376 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~  376 (573)
                      +...+..+ .-.|+|.| .++.-+     .|||+++-.+++..
T Consensus      1263 FD~ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~lLh~V 1299 (1516)
T KOG1832|consen 1263 FDQFTDYG-GGGFHPSGNEVIINS-----EIWDMRTFKLLHSV 1299 (1516)
T ss_pred             hhhheecc-cccccCCCceEEeec-----hhhhhHHHHHHhcC
Confidence            54433111 12344544 232222     48998887665443

>KOG3617|consensus

Probab=98.07  E-value=0.00033  Score=71.64  Aligned_cols=70  Identities=21%  Similarity=0.263  Sum_probs=62.1

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      +++++|+|..-.||.|-.-|.+.+|...+.+.-.....|..++..+.||++|..++++..-|.+.+|...
T Consensus        62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            4579999999889999999999999987766555567899999999999999999999999999999765

>KOG2066|consensus

Probab=98.04  E-value=0.00036  Score=71.14  Aligned_cols=139  Identities=15%  Similarity=0.284  Sum_probs=92.4

Q ss_pred             CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccc
Q psy2671         121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT  200 (573)
Q Consensus       121 ~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (573)
                      +|.++||||.||+|.|-.+.+.....+                                                     
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~-----------------------------------------------------  108 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQ-----------------------------------------------------  108 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCcccee-----------------------------------------------------
Confidence            599999999999999887765432110                                                     


Q ss_pred             cCCCCCCCcEEEEEEcCC-----CCeEEEEeCCCeEEEEECC---CCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         201 SSMPGHAEAVISVKFSPN-----GRSLASGSGDTTVRFWDVT---TQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~-----g~~las~s~d~~i~iwd~~---~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                        . ....++.+++++|+     .+++++||.-| +.++.-.   ....+ .+..-.++|.++.|.  |+++|=++.+| 
T Consensus       109 --~-df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~--g~lIAWand~G-  180 (846)
T KOG2066|consen  109 --Y-DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWR--GNLIAWANDDG-  180 (846)
T ss_pred             --E-ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEec--CcEEEEecCCC-
Confidence              0 12357899999998     56789999888 7776521   11222 344456789999996  77888887777 


Q ss_pred             EEEEECCCCceecccccCCcc-----cEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQ-----WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      |++||+.+++.+......+..     .-..+.|.+      ..+++ -|+.-+|+|..+.
T Consensus       181 v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~------~~~LV-IGW~d~v~i~~I~  233 (846)
T KOG2066|consen  181 VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQD------EDRLV-IGWGDSVKICSIK  233 (846)
T ss_pred             cEEEeccccceeeccCCCCCCCCcccCCCceEecC------CCeEE-EecCCeEEEEEEe
Confidence            899999988876544333311     112334432      23444 4566788888876

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.00  E-value=5.3e-05  Score=74.77  Aligned_cols=75  Identities=25%  Similarity=0.422  Sum_probs=62.6

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      .....|.|++++|+.+.|+.|+.||+|.+||...+.....  ...-....++|+|+|..+++|+..|.+.+||+.-+
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~--ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA--KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee--eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            3567899999999999999999999999999877644332  22334678999999999999999999999998644

>KOG1920|consensus

Probab=97.98  E-value=0.0047  Score=66.31  Aligned_cols=241  Identities=15%  Similarity=0.190  Sum_probs=130.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS  329 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  329 (573)
                      ..|.++.|..++..++.+..+|.|.+-|+++....  ....-...|.+.+|+|     +.+.++-.+..+++.+-+- .-
T Consensus        69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e--ivg~vd~GI~aaswS~-----Dee~l~liT~~~tll~mT~-~f  140 (1265)
T KOG1920|consen   69 DEIVSVQFLADTNSICVITALGDIILVDPETLELE--IVGNVDNGISAASWSP-----DEELLALITGRQTLLFMTK-DF  140 (1265)
T ss_pred             cceEEEEEecccceEEEEecCCcEEEEccccccee--eeeeccCceEEEeecC-----CCcEEEEEeCCcEEEEEec-cc
Confidence            57999999999999999999999999988775431  1222345788999987     5677777777777654321 11


Q ss_pred             eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeee-EeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMC-RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       330 ~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                      .++..-..+.      .-.+.+..+++++.+.=.-+.-+.|+.. +....+......                       
T Consensus       141 ~~i~E~~L~~------d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~-----------------------  191 (1265)
T KOG1920|consen  141 EPIAEKPLDA------DDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQ-----------------------  191 (1265)
T ss_pred             cchhcccccc------ccccccccceecccccceeeecchhhhcccccccccccccc-----------------------
Confidence            1111000000      0011223444444432222221111100 000000000000                       


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEE-----EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe---eC
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVS-----GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA---SF  480 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~s-----g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~---s~  480 (573)
                           ...........+..+|+++|+     ....+.+++||.+..........  ...=.+++|-|.|.++|+-   +.
T Consensus       192 -----~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drEg~Lns~se~~--~~l~~~LsWkPsgs~iA~iq~~~s  264 (1265)
T KOG1920|consen  192 -----IEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDREGALNSTSEPV--EGLQHSLSWKPSGSLIAAIQCKTS  264 (1265)
T ss_pred             -----hhhccCCceEEEccCCcEEEEEEEeccCCceeEEEecccchhhcccCcc--cccccceeecCCCCeEeeeeecCC
Confidence                 000111112233456777776     33337999999762221111111  1123578999999999985   34


Q ss_pred             CCcEEEEeCC---CCeEEEeecCCcceEEEEEECCCCCEEEE---EeCCCcEEEEeCCcc
Q psy2671         481 DKSIKLWDGR---IGKFITTLRGHVQAVYMVAWSSDSRLLVS---GSADSTLKVWNMKTK  534 (573)
Q Consensus       481 dg~i~lwd~~---~~~~~~~~~~h~~~v~~v~~s~dg~~las---~s~D~~v~vwd~~~~  534 (573)
                      |+.|.++...   -|+....+......+..++|+.++..||+   ......|++|-+.+.
T Consensus       265 d~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  265 DSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             CCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence            5678888732   12222223333445899999999999987   444455999988764

>KOG2066|consensus

Probab=97.93  E-value=0.0003  Score=71.70  Aligned_cols=140  Identities=21%  Similarity=0.313  Sum_probs=96.3

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC-----CCeEEEEeeCCeEEEEECCC-CceecccccCC
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD-----SKQLVSGCKNGVIHAWDSST-GKQIGQPMRGH  291 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d-----g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h  291 (573)
                      +|.+++|||.||+|.|-.+-+........ ...++.+++++||     .+++++|+..| +.++.-.= |......+..-
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~  159 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG  159 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence            59999999999999999988776655443 3457899999998     56799999999 66664321 11111123445


Q ss_pred             cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc------EEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         292 KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS------VTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       292 ~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~------v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      .+.|.++.|.       |.++|-++.+| |++||...++.+..+......      -..+.|.++..++ -|+..+|++.
T Consensus       160 eG~I~~i~W~-------g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LV-IGW~d~v~i~  230 (846)
T KOG2066|consen  160 EGPIHSIKWR-------GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLV-IGWGDSVKIC  230 (846)
T ss_pred             ccceEEEEec-------CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEE-EecCCeEEEE
Confidence            6789999995       45677666555 899999888766555432222      2346777666554 4577788887


Q ss_pred             eCC
Q psy2671         366 RAS  368 (573)
Q Consensus       366 ~~~  368 (573)
                      .++
T Consensus       231 ~I~  233 (846)
T KOG2066|consen  231 SIK  233 (846)
T ss_pred             EEe
Confidence            766

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=97.91  E-value=0.012  Score=55.51  Aligned_cols=275  Identities=15%  Similarity=0.172  Sum_probs=134.2

Q ss_pred             CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEECCCCceeccc-ccC-CcccEE
Q psy2671         229 TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDSSTGKQIGQP-MRG-HKQWIT  296 (573)
Q Consensus       229 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~~~~~~~~~~-~~~-h~~~v~  296 (573)
                      +++.+.|..+++.+.....  +..-.+..|||++.+++++          +.-.|.+||..+-....+. +.+ |+..  
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~--   92 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQ--   92 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B----
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchhe--
Confidence            4788899888876655432  1223467899999888654          3457999999876543321 111 1110  


Q ss_pred             EEEe-cccccCCCCCEEEEE--eCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCee
Q psy2671         297 ALSW-EPFHLNHQCRRFASS--GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVM  372 (573)
Q Consensus       297 ~~~~-~~~~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~  372 (573)
                      .+.+ .-+.++.+++++...  +-...|.+-|+..++.+..+..  ..+..+--.++..+.+-+.||++....+. .|+.
T Consensus        93 ~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~--PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~  170 (342)
T PF06433_consen   93 VVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT--PGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKE  170 (342)
T ss_dssp             BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG--TSEEEEEEEETTEEEEEETTSCEEEEEETSTSSE
T ss_pred             ecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC--CCEEEEEecCCCceEEEecCCceEEEEECCCCCE
Confidence            0000 001122233332221  1222344444444444333321  11111222233457788889988877776 3433


Q ss_pred             eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc
Q psy2671         373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS  452 (573)
Q Consensus       373 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~  452 (573)
                      .....        -.+.++                  +..      +.........+..++--+.+|.|+--|+......
T Consensus       171 ~~~~t--------~~F~~~------------------~dp------~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~  218 (342)
T PF06433_consen  171 AQKST--------KVFDPD------------------DDP------LFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAK  218 (342)
T ss_dssp             EEEEE--------EESSTT------------------TS-------B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEE
T ss_pred             eEeec--------cccCCC------------------Ccc------cccccceECCCCeEEEEecCCEEEEEeccCCccc
Confidence            21110        011111                  000      0000001122334444666777666665443211


Q ss_pred             e-eeec---cc---c----ccEEEEEECCCCCEEEEee---CCC-------cEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         453 L-ARMT---GH---Q----QLINCVEFSPDGRIIASAS---FDK-------SIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       453 ~-~~~~---~h---~----~~v~~v~~sp~g~~las~s---~dg-------~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                      . ..+.   .-   .    ..-.-+++++..+.|.+--   .+|       .|.++|+.+++.+..+... ..+.+++++
T Consensus       219 ~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vs  297 (342)
T PF06433_consen  219 FGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVS  297 (342)
T ss_dssp             EEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEE
T ss_pred             ccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEc
Confidence            1 1110   00   0    0012367776555544421   222       3778899999999887632 457789999


Q ss_pred             CCCC-EEEEE-eCCCcEEEEeCCcccccccccC
Q psy2671         512 SDSR-LLVSG-SADSTLKVWNMKTKKIEQDLPG  542 (573)
Q Consensus       512 ~dg~-~las~-s~D~~v~vwd~~~~~~~~~l~~  542 (573)
                      .|.+ +|++. ..++.+.+||..+++.++.+.+
T Consensus       298 qd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~  330 (342)
T PF06433_consen  298 QDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ  330 (342)
T ss_dssp             SSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred             cCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence            8876 55544 4688999999999998877664

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=97.90  E-value=0.00013  Score=72.15  Aligned_cols=74  Identities=20%  Similarity=0.331  Sum_probs=60.1

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      +...|.|++++|+...++.|+.||+|++||...+.....                                         
T Consensus       258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-----------------------------------------  296 (545)
T PF11768_consen  258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-----------------------------------------  296 (545)
T ss_pred             cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-----------------------------------------
Confidence            667899999999999999999999999999866532110                                         


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ  239 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~  239 (573)
                                      -+.-..+.++|+|+|..+++|+..|.+.+||+.-.
T Consensus       297 ----------------ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  297 ----------------KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             ----------------eecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence                            01123568999999999999999999999997643

>KOG3617|consensus

Probab=97.83  E-value=0.0011  Score=68.09  Aligned_cols=107  Identities=18%  Similarity=0.313  Sum_probs=79.6

Q ss_pred             EEEcCCCCeEEEEe----CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671         213 VKFSPNGRSLASGS----GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM  288 (573)
Q Consensus       213 ~~fsp~g~~las~s----~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~  288 (573)
                      .+|+|...++|.++    ..|.|.||- .+|+|-..... .-.+.+++|+|..-.|++|-..|.+.+|...+.+.. ...
T Consensus        21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h-tv~   97 (1416)
T KOG3617|consen   21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH-TVV   97 (1416)
T ss_pred             cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccChHHHHHhhccccceeEEEecCCceee-eec
Confidence            35788888887775    457888885 45554322111 112567999999888999999999999988765433 334


Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      ..|+..|..+.|++     +|..++++..-|.+.+|...
T Consensus        98 ~th~a~i~~l~wS~-----~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   98 ETHPAPIQGLDWSH-----DGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             cCCCCCceeEEecC-----CCCeEEEcCCCceeEEEEee
Confidence            57899999999976     67899999999999999865

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.83  E-value=0.024  Score=55.91  Aligned_cols=261  Identities=18%  Similarity=0.195  Sum_probs=120.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE-EecCC----------------CCcEEEEEEcCCCCeEEEEeeC
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF-KCEGH----------------KHWVLCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~-~~~~h----------------~~~V~~v~~s~dg~~l~sgs~d  270 (573)
                      ..+....|||+|+.+|-.. ++.|.+++..++.... +..|.                -+.-..+-|||||++||....|
T Consensus        43 ~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d  121 (353)
T PF00930_consen   43 PKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFD  121 (353)
T ss_dssp             TTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE
T ss_pred             cccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEEC
Confidence            4566788999999998886 5789999987764432 22220                0112467899999999876554


Q ss_pred             -CeEEEEECCCCceecccccCC--cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE--e---cCCCccE
Q psy2671         271 -GVIHAWDSSTGKQIGQPMRGH--KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV--L---TSHTRSV  342 (573)
Q Consensus       271 -g~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~---~~h~~~v  342 (573)
                       ..|+.+.+..      ....+  ...+..+.+ |..    |....    .-.+.++|+.+++....  .   .....-+
T Consensus       122 ~~~v~~~~~~~------~~~~~~~yp~~~~~~Y-Pk~----G~~np----~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl  186 (353)
T PF00930_consen  122 EREVPEYPLPD------YSPPDSQYPEVESIRY-PKA----GDPNP----RVSLFVVDLASGKTTELDPPNSLNPQDYYL  186 (353)
T ss_dssp             -TTS-EEEEEE------ESSSTESS-EEEEEE---BT----TS-------EEEEEEEESSSTCCCEE---HHHHTSSEEE
T ss_pred             CcCCceEEeec------cCCccccCCccccccc-CCC----CCcCC----ceEEEEEECCCCcEEEeeeccccCCCccCc
Confidence             3344332210      00000  012233332 110    11000    11355677766654221  1   2334567


Q ss_pred             EEEEECCCcE-EEEE--eCCC---eEEEEeCCCCeeeEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         343 TCIRWGGSGL-IYSA--SQDR---TIKVWRASDGVMCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       343 ~~~~~~~~~~-l~s~--s~d~---~i~vw~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      ..+.|.+++. ++..  ..+.   .+.+.|..++...... +....|+.                       ..      
T Consensus       187 ~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~-----------------------~~------  237 (353)
T PF00930_consen  187 TRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVD-----------------------VY------  237 (353)
T ss_dssp             EEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSS-----------------------SS------
T ss_pred             ccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCccee-----------------------ee------
Confidence            7888876654 4332  2222   2333444433221111 00111110                       00      


Q ss_pred             hhhhhheeee-CC-CCcEEEEEeCCCeEEE--EcCCCCccceeeeccccccEEE-EEECCCCCEEE-EeeCC--C--cEE
Q psy2671         416 KHALAKYQAQ-CP-EGEKLVSGSDDFTLFL--WNPEKEKKSLARMTGHQQLINC-VEFSPDGRIIA-SASFD--K--SIK  485 (573)
Q Consensus       416 ~~~~~~~~~~-~~-~~~~l~sg~~dg~i~l--wd~~~~~~~~~~~~~h~~~v~~-v~~sp~g~~la-s~s~d--g--~i~  485 (573)
                           ..... .+ ...++.....+|.-.|  .+...+.  ...+....-.|.. +.++++++.|. +|..+  +  .+.
T Consensus       238 -----~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~--~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY  310 (353)
T PF00930_consen  238 -----DPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK--PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLY  310 (353)
T ss_dssp             -----SEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE--EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEE
T ss_pred             -----cccccccCCCCEEEEEEEcCCCcEEEEEcccccc--eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEE
Confidence                 00001 12 2334445556665444  4444332  3344444445644 67888877554 44432  2  344


Q ss_pred             EEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE
Q psy2671         486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG  520 (573)
Q Consensus       486 lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~  520 (573)
                      .-+...+..+..+.........+.|||+|++++-.
T Consensus       311 ~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~  345 (353)
T PF00930_consen  311 RVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDT  345 (353)
T ss_dssp             EEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred             EEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence            44555223344443322222689999999987754

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.83  E-value=0.024  Score=58.04  Aligned_cols=133  Identities=17%  Similarity=0.157  Sum_probs=84.8

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCC----CccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeE-------
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEK----EKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKF-------  494 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~----~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~-------  494 (573)
                      ++|++...  .++.|.+.|..+    ....+..+. -.+....+++||||++++++ ..+.+|.+.|+.+.+.       
T Consensus       286 kdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~  362 (635)
T PRK02888        286 KAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIK  362 (635)
T ss_pred             hCCCEEEE--CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCC
Confidence            45655554  367899999886    233333222 33456789999999987765 4689999999887542       


Q ss_pred             -----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------cccccccc-----CcCCCEEEEEEcc
Q psy2671         495 -----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT----------KKIEQDLP-----GHGDEVYAVDWAP  554 (573)
Q Consensus       495 -----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~----------~~~~~~l~-----~h~~~v~~~~~s~  554 (573)
                           .....--.+ -...+|.++|....|-..|+.|-.||+..          ...+..+.     ||...-.+=.-.|
T Consensus       363 ~~~~vvaevevGlG-PLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~  441 (635)
T PRK02888        363 PRDAVVAEPELGLG-PLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEA  441 (635)
T ss_pred             ccceEEEeeccCCC-cceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCC
Confidence                 222221112 23568999998888888999999999876          22333333     3322222223368


Q ss_pred             CCCEEEEee
Q psy2671         555 DGEKVASGG  563 (573)
Q Consensus       555 d~~~l~s~~  563 (573)
                      ||+||++..
T Consensus       442 dgk~l~~~n  450 (635)
T PRK02888        442 DGKWLVSLN  450 (635)
T ss_pred             CCCEEEEcc
Confidence            899988754

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.81  E-value=0.056  Score=55.80  Aligned_cols=155  Identities=17%  Similarity=0.194  Sum_probs=87.0

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCCCc--EEEEEEcC--CCCeEEEEe---------eCCeEEEEECCCCceecc
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW--VLCIAWSP--DSKQLVSGC---------KNGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~--V~~v~~s~--dg~~l~sgs---------~dg~i~vwd~~~~~~~~~  286 (573)
                      ..++.++.++.|.-+|.++++.+.+.......  -..+.-+|  .+..++.++         .+|.+...|..+|+.+.+
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~  190 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR  190 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence            56777888999999999999988776533221  00111111  124455554         367899999999987654


Q ss_pred             cccCCccc-----------EE----EEEecccccCCCCCEEEEEeCCC------------------cEEEEECCCCeEEE
Q psy2671         287 PMRGHKQW-----------IT----ALSWEPFHLNHQCRRFASSGKDG------------------AIRIWDVILSQCVR  333 (573)
Q Consensus       287 ~~~~h~~~-----------v~----~~~~~~~~~~~~~~~l~s~~~dg------------------~v~iwd~~~~~~~~  333 (573)
                      ........           +.    ...|.+......+.++..++.++                  .+.-+|..+++..-
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W  270 (488)
T cd00216         191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW  270 (488)
T ss_pred             eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence            32211100           00    01111111222234555555444                  68888888888776


Q ss_pred             Eec--CCCc--------cE-EEEE-ECCC--cEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671         334 VLT--SHTR--------SV-TCIR-WGGS--GLIYSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       334 ~~~--~h~~--------~v-~~~~-~~~~--~~l~s~s~d~~i~vw~~~~~~~~~  374 (573)
                      ...  .|..        ++ ..+. ..+.  ..++.++.+|.+...|..+|+.+-
T Consensus       271 ~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W  325 (488)
T cd00216         271 FYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLIS  325 (488)
T ss_pred             EeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEee
Confidence            543  1211        11 1111 1111  257888899999999999987653

The alignment model contains an 8-bladed beta-propeller.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.80  E-value=0.03  Score=55.39  Aligned_cols=267  Identities=15%  Similarity=0.157  Sum_probs=124.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCC-------------------------------------------eeeEEe
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-------------------------------------------TPLFKC  245 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~-------------------------------------------~~~~~~  245 (573)
                      .|+.+.|+++..-||.|...|.|.||.+...                                           .+...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            4788999999888999999999999864311                                           012222


Q ss_pred             cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc-ccc------CCcccEEEEEecccccCCCC---CEEEEE
Q psy2671         246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ-PMR------GHKQWITALSWEPFHLNHQC---RRFASS  315 (573)
Q Consensus       246 ~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~-~~~------~h~~~v~~~~~~~~~~~~~~---~~l~s~  315 (573)
                      ....+.|++++.|.=| ++|.|..+|.+.|.|++....+.. .+.      .....++++.|....+..++   -.+..|
T Consensus        83 ~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            3346789999997544 899999999999999976654432 111      12345666666554443332   234445


Q ss_pred             eCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC--eEEEEeCCCCeeeEeccCCcceeeEEEeccCce
Q psy2671         316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR--TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL  393 (573)
Q Consensus       316 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~  393 (573)
                      ...|.+.+|.+.-.      ....-.+..+...      ....+.  .|...+..+|....                   
T Consensus       162 Tn~G~v~~fkIlp~------~~g~f~v~~~~~~------~~~~~~i~~I~~i~~~~G~~a~-------------------  210 (395)
T PF08596_consen  162 TNSGNVLTFKILPS------SNGRFSVQFAGAT------TNHDSPILSIIPINADTGESAL-------------------  210 (395)
T ss_dssp             ETTSEEEEEEEEE-------GGG-EEEEEEEEE--------SS----EEEEEETTT--B-B-------------------
T ss_pred             eCCCCEEEEEEecC------CCCceEEEEeecc------ccCCCceEEEEEEECCCCCccc-------------------
Confidence            55555555443100      0000000000000      000000  01111111111000                   


Q ss_pred             eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE-----
Q psy2671         394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF-----  468 (573)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~-----  468 (573)
                                       ........+..    -..-..++....+..+|++.+.+.+...+.+ ........+.+     
T Consensus       211 -----------------At~~~~~~l~~----g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~-~~~~~~~~~~vv~~~~  268 (395)
T PF08596_consen  211 -----------------ATISAMQGLSK----GISIPGYVVVVSESDIRVFKPPKSKGAHKSF-DDPFLCSSASVVPTIS  268 (395)
T ss_dssp             ------------------BHHHHHGGGG----T----EEEEEE-SSEEEEE-TT---EEEEE--SS-EEEEEEEEEEEE-
T ss_pred             -----------------CchhHhhcccc----CCCcCcEEEEEcccceEEEeCCCCcccceee-ccccccceEEEEeecc
Confidence                             00000000000    0011234555567889999887765444444 22222333444     


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC----cceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRIGKFITTLRGH----VQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h----~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ...+..|++-..+|.|++|.+-..+.+..++-+    ...+....++++|..++-.+.. .+.++.
T Consensus       269 ~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gps-E~~l~s  333 (395)
T PF08596_consen  269 RNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGPS-EIQLFS  333 (395)
T ss_dssp             EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSS-EEEEEE
T ss_pred             cCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEEeCcc-cEEEEE
Confidence            235667888889999999999887777665432    2234456778999987766543 444443

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG2114|consensus

Probab=97.76  E-value=0.0063  Score=62.95  Aligned_cols=214  Identities=13%  Similarity=0.191  Sum_probs=118.8

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc-EEEEEECCC-cEEEEEeCCC-----eEEEEeCCCCeeeEeccCCc
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGS-GLIYSASQDR-----TIKVWRASDGVMCRTLEGHA  380 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~-~~l~s~s~d~-----~i~vw~~~~~~~~~~~~~~~  380 (573)
                      .+..++.|+.+|.|.+++-. .+..+-+..+... |..+..... ..+++.+.|.     .+++|+++.-.....  .+ 
T Consensus        34 ~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s--P~-  109 (933)
T KOG2114|consen   34 STGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS--PQ-  109 (933)
T ss_pred             CCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC--cc-
Confidence            45678889999998887642 2233555566655 333333222 4677766554     589999864210000  00 


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC--CCcc-ceeeec
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE--KEKK-SLARMT  457 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~--~~~~-~~~~~~  457 (573)
                       -+......+        ..      .|.++      ......+.+.+-..+|.|-.+|.|..+.-.  ..+. ......
T Consensus       110 -c~~~~ri~~--------~~------np~~~------~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~  168 (933)
T KOG2114|consen  110 -CLYEHRIFT--------IK------NPTNP------SPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSH  168 (933)
T ss_pred             -eeeeeeeec--------cC------CCCCC------CcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeec
Confidence             000000000        00      00000      000111222345678999999999887421  1111 111122


Q ss_pred             cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe-EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK-FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~-~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      .-.++|+.++|..+++.++-...-..|.+|.+.... ....+..|...++|..+++....++.++ +..+.+|+....+.
T Consensus       169 ~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~  247 (933)
T KOG2114|consen  169 RGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGP  247 (933)
T ss_pred             cCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcce
Confidence            235689999999998873333344578999876322 2455777888899999987655355444 45799999987665


Q ss_pred             ccccc-CcCCCE
Q psy2671         537 EQDLP-GHGDEV  547 (573)
Q Consensus       537 ~~~l~-~h~~~v  547 (573)
                      .-.+. ||....
T Consensus       248 cfaf~~g~kk~~  259 (933)
T KOG2114|consen  248 CFAFEVGEKKEM  259 (933)
T ss_pred             eeeecCCCeEEE
Confidence            55565 665443

>KOG2114|consensus

Probab=97.73  E-value=0.0037  Score=64.53  Aligned_cols=142  Identities=15%  Similarity=0.218  Sum_probs=94.9

Q ss_pred             cEEEEEeCCC-----eEEEEcCCCCc-----cce--eeecc-----ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-
Q psy2671         430 EKLVSGSDDF-----TLFLWNPEKEK-----KSL--ARMTG-----HQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-  491 (573)
Q Consensus       430 ~~l~sg~~dg-----~i~lwd~~~~~-----~~~--~~~~~-----h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-  491 (573)
                      ..|++-++|+     .+++|+++...     .++  .++..     ...++.+++++.+-+.+|+|-.||.|..+...- 
T Consensus        78 ~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~  157 (933)
T KOG2114|consen   78 NFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDIL  157 (933)
T ss_pred             eEEEEEeecCCCCceEEEEecccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcch
Confidence            4666666654     58999987531     112  12323     245688999999999999999999999996432 


Q ss_pred             ---CeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-ccccccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         492 ---GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       492 ---~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                         |....-...-..+|+.+++..|++.++-+.....|.+|.+.... ....+..|...++|..|++....+++++.. .
T Consensus       158 RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e-~  236 (933)
T KOG2114|consen  158 RDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSE-F  236 (933)
T ss_pred             hccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCc-e
Confidence               11111112235689999999999873333344579999998544 245577888899999999876656666543 3


Q ss_pred             EEEcc
Q psy2671         568 LRLWQ  572 (573)
Q Consensus       568 i~iw~  572 (573)
                      +.+|+
T Consensus       237 l~fY~  241 (933)
T KOG2114|consen  237 LYFYD  241 (933)
T ss_pred             EEEEc
Confidence            55543

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.69  E-value=0.065  Score=52.80  Aligned_cols=67  Identities=21%  Similarity=0.233  Sum_probs=45.7

Q ss_pred             cCCCCeEEEE---------eCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671         216 SPNGRSLASG---------SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       216 sp~g~~las~---------s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~  284 (573)
                      |||+++++..         +..+.+.|||+.+++....... ...+....|||+|+.++.. .++.|.+++..++...
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v-~~~nly~~~~~~~~~~   76 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFV-RDNNLYLRDLATGQET   76 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEE-ETTEEEEESSTTSEEE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEE-ecCceEEEECCCCCeE
Confidence            6777777653         2346789999998764332222 4567788999999988876 4678999988776443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>smart00320 WD40 WD40 repeats

Probab=97.69  E-value=5e-05  Score=46.80  Aligned_cols=34  Identities=50%  Similarity=0.931  Sum_probs=30.9

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEee
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD  138 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd  138 (573)
                      .+..|.+.|.++.|+++++++++++.|+.+++||
T Consensus         7 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        7 TLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            3456899999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG3621|consensus

Probab=97.64  E-value=0.00033  Score=70.38  Aligned_cols=139  Identities=15%  Similarity=0.224  Sum_probs=97.1

Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---EE--E
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---FI--T  496 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---~~--~  496 (573)
                      +......+++++.|+.-|.+++|+...+........+....+.....|++..++|.|+..|.|.++-+....   .+  .
T Consensus        38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t  117 (726)
T KOG3621|consen   38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVT  117 (726)
T ss_pred             EEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeec
Confidence            444456789999999999999999665543333333344556667889999999999999999999765432   11  1


Q ss_pred             ee-cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc----ccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         497 TL-RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       497 ~~-~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      .+ +.|...|++++|++|+..|.+|...|+|..-.+.+..    ..+.+-.-.+.|-.++... +..|++
T Consensus       118 ~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q-~~LLVS  186 (726)
T KOG3621|consen  118 PCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQ-SYLLVS  186 (726)
T ss_pred             cccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeeccc-ceehHh
Confidence            12 2377899999999999999999999999988887621    1122222345677777653 344443

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.57  E-value=0.015  Score=57.53  Aligned_cols=270  Identities=11%  Similarity=0.138  Sum_probs=127.6

Q ss_pred             cEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-
Q psy2671         251 WVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-  328 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-  328 (573)
                      .|.++.|+++..-|++|...|.|.+|.....+... +..    ..-....+.++..+..           .-.+-|+.. 
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~----~~~~~~~~~~~~~~~~-----------~~~l~di~~r   67 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQ----PPDLDYNFRRFSLNNS-----------PGKLTDISDR   67 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE----------------------S--GGGS-----------S-SEEE-GGG
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCC----CcccCcccccccccCC-----------CcceEEehhh
Confidence            47899999998899999999999998765432211 000    0001111122211111           111122211 


Q ss_pred             --------CeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe--ccC------CcceeeEEEeccCc
Q psy2671         329 --------SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT--LEG------HAHWVNTLALSTDY  392 (573)
Q Consensus       329 --------~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~--~~~------~~~~v~~~~~s~~~  392 (573)
                              ..+...+....+.|++++.++-|.++.|..+|++.+.|++....+..  +..      ....+..+.|+.  
T Consensus        68 ~~~~~~~gf~P~~l~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~v--  145 (395)
T PF08596_consen   68 APPSLKEGFLPLTLLDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSV--  145 (395)
T ss_dssp             --TT-SEEEEEEEEE---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEE--
T ss_pred             CCcccccccCchhheeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEE--
Confidence                    12334455568899999999999999999999999999986655433  111      111233322220  


Q ss_pred             eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC--CCccc----eeeeccccccEEEE
Q psy2671         393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE--KEKKS----LARMTGHQQLINCV  466 (573)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~--~~~~~----~~~~~~h~~~v~~v  466 (573)
                          ......                       ....-.+.+|...|.+.+|.+.  .....    ......+...|..+
T Consensus       146 ----m~~~~D-----------------------~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I  198 (395)
T PF08596_consen  146 ----MTLGGD-----------------------GYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSI  198 (395)
T ss_dssp             ----EE-TTS-----------------------SSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EE
T ss_pred             ----EecCCC-----------------------cccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEE
Confidence                000000                       0112467888888988888653  11111    11112344444444


Q ss_pred             E-ECCC-C-------------------CEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE-----CCCCCEEEEE
Q psy2671         467 E-FSPD-G-------------------RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-----SSDSRLLVSG  520 (573)
Q Consensus       467 ~-~sp~-g-------------------~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~-----s~dg~~las~  520 (573)
                      . |+.+ |                   .-++....+..+|++...+.+.........-....+.+     ...+..|++-
T Consensus       199 ~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l  278 (395)
T PF08596_consen  199 IPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCL  278 (395)
T ss_dssp             EEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEE
T ss_pred             EEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEE
Confidence            3 3221 1                   12333344677999988777655443322223333444     2356678888


Q ss_pred             eCCCcEEEEeCCcccccccccCcC----CCEEEEEEccCCCEEEEeeC
Q psy2671         521 SADSTLKVWNMKTKKIEQDLPGHG----DEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       521 s~D~~v~vwd~~~~~~~~~l~~h~----~~v~~~~~s~d~~~l~s~~~  564 (573)
                      ..+|.|++|.+..-+.+..+.-..    ..+....++++|..+.-.|.
T Consensus       279 ~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gp  326 (395)
T PF08596_consen  279 FNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGP  326 (395)
T ss_dssp             ETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SS
T ss_pred             ECCCcEEEEECCCchHhhcccCCCccccccccccEECCCCCEEEEeCc
Confidence            899999999998876654433211    12334566888876655544

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>KOG4649|consensus

Probab=97.54  E-value=0.056  Score=48.20  Aligned_cols=106  Identities=18%  Similarity=0.126  Sum_probs=67.8

Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-Cc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-TR  340 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~  340 (573)
                      .+++.|+..+.+.--|..+|+.+.+..-+-+-.-.++.        -++.++.|...|.+.+.+..++.....+..- +-
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v--------vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v   95 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV--------VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV   95 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE--------ECCEEEEEEccCcEEEEEecchhheeeeeehhhh
Confidence            45667777777777777777766554444332222222        2456888899999999999888655544321 11


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~  375 (573)
                      .+....-...+.|+.|+.|++...-|.++...+..
T Consensus        96 k~~a~~d~~~glIycgshd~~~yalD~~~~~cVyk  130 (354)
T KOG4649|consen   96 KVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYK  130 (354)
T ss_pred             ccceEEcCCCceEEEecCCCcEEEecccccceEEe
Confidence            22222223456899999999999888877655443

>smart00320 WD40 WD40 repeats

Probab=97.51  E-value=0.0003  Score=43.11  Aligned_cols=38  Identities=42%  Similarity=0.768  Sum_probs=33.7

Q ss_pred             eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      +.+..+..|...|.++.|++++.++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45566778888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=97.51  E-value=0.0007  Score=67.29  Aligned_cols=93  Identities=18%  Similarity=0.306  Sum_probs=76.5

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEE-EEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL-CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      .|.-+.|+|.-..+|.+..+|.+.+..+. -..+.++.-|...++ +++|.|||+.||.|-.||+|++-|+++|..+...
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF  100 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence            46778899999999999999999999987 667788776776676 9999999999999999999999999998766554


Q ss_pred             ccCCcccEEEEEecc
Q psy2671         288 MRGHKQWITALSWEP  302 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~  302 (573)
                      ...-...|..+.|.+
T Consensus       101 ~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen  101 LFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccchheeeccc
Confidence            344455666777754

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.47  E-value=0.003  Score=66.80  Aligned_cols=140  Identities=20%  Similarity=0.292  Sum_probs=92.4

Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcce-eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg  435 (573)
                      .....|.-.|+..|+.+..+..|... |..++....+.                               . -.......|
T Consensus       501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~a-------------------------------q-lt~e~tflG  548 (794)
T PF08553_consen  501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFA-------------------------------Q-LTNEQTFLG  548 (794)
T ss_pred             CCCCceEEEecCCCcEEEEeecCCCcceeEeccccccc-------------------------------c-cCCCceEEE
Confidence            45677788888888888888766532 33332211000                               0 012345677


Q ss_pred             eCCCeEEEEcCCCCccceee----eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE-EEeecCCcceEEEEEE
Q psy2671         436 SDDFTLFLWNPEKEKKSLAR----MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMVAW  510 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~----~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~-~~~~~~h~~~v~~v~~  510 (573)
                      -.+..+..||++-....+..    .........|++-+.+| +||+|+.+|.||+||. .|+. -..|.+-..+|..|..
T Consensus       549 ls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDv  626 (794)
T PF08553_consen  549 LSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDV  626 (794)
T ss_pred             ECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEe
Confidence            78888999998854322211    11223457788888777 6889999999999994 4433 3346677789999999


Q ss_pred             CCCCCEEEEEeCCCcEEEEeC
Q psy2671         511 SSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~  531 (573)
                      +.||++|++.+ +..+.|++.
T Consensus       627 t~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  627 TADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             cCCCcEEEEee-cceEEEEEE
Confidence            99999988666 456777765

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG3621|consensus

Probab=97.45  E-value=0.00074  Score=67.98  Aligned_cols=110  Identities=19%  Similarity=0.280  Sum_probs=81.5

Q ss_pred             ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc---
Q psy2671         461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI---  536 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~---  536 (573)
                      ..|.--+++..+++++.|+.-|.+.+|+-..++... ...+-.+.+..+..|++..++|.|+..|.|.++-++....   
T Consensus        34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~  113 (726)
T KOG3621|consen   34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL  113 (726)
T ss_pred             ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence            344445667788999999999999999866554322 2222344566678899999999999999999998866321   


Q ss_pred             c--ccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         537 E--QDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       537 ~--~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      .  ..+ ..|...|+++.|++|++.+.+|..-|+|.+
T Consensus       114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~  150 (726)
T KOG3621|consen  114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVL  150 (726)
T ss_pred             eeeccccccCCceEEEEEecccccEEeecCCCceEEE
Confidence            1  111 237789999999999999999999898754

>KOG4649|consensus

Probab=97.44  E-value=0.079  Score=47.32  Aligned_cols=136  Identities=17%  Similarity=0.106  Sum_probs=86.0

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEE
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS  299 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~  299 (573)
                      .+++.||..+.+.--|..+|..+++..- ...+.+-+.- -|++++.|+..|.+.+.+.++|.+.........-.+.+. 
T Consensus        24 T~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~-  100 (354)
T KOG4649|consen   24 TLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQ-  100 (354)
T ss_pred             eEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceE-
Confidence            4678888888888889888887665321 1122222222 367899999999999999999976543322211112211 


Q ss_pred             ecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCCCeEE
Q psy2671         300 WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQDRTIK  363 (573)
Q Consensus       300 ~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d~~i~  363 (573)
                           ...++..+-.++.|++....|..+..++...+.-.....+-+..+ ++.++.+...|.+.
T Consensus       101 -----~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vl  160 (354)
T KOG4649|consen  101 -----CDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVL  160 (354)
T ss_pred             -----EcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEE
Confidence                 234567888999999999999998888776543322222223332 45566666555543

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.44  E-value=0.15  Score=52.40  Aligned_cols=56  Identities=14%  Similarity=0.106  Sum_probs=36.7

Q ss_pred             EEEcCCCCeEEE-EeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee
Q psy2671         213 VKFSPNGRSLAS-GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK  269 (573)
Q Consensus       213 ~~fsp~g~~las-~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~  269 (573)
                      +-++|||+.+.. .-..+.+.+.|..+.+...++.--. .-.-++++|||+++++.+.
T Consensus       198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsy  254 (635)
T PRK02888        198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCY  254 (635)
T ss_pred             cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEecc
Confidence            345678876633 3345678888888766665543322 2256789999999988764

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=97.41  E-value=0.22  Score=51.81  Aligned_cols=112  Identities=17%  Similarity=0.175  Sum_probs=66.1

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEE---E-------EEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVL---C-------IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~---~-------v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      +..++.++.++.|.-.|..+++.+.+..... ..+.   +       +++  .+..++.++.|+.+.-.|.++|+.+.+.
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~  146 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK  146 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence            4467777778888889999998887654211 1111   1       222  2346888899999999999999887543


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEe
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~  335 (573)
                      .......-..+.-.|.-  .++ .++.+.      .+|.|+-+|..+++.+-..
T Consensus       147 ~~~~~~~~~~~tssP~v--~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~  197 (527)
T TIGR03075       147 KNGDYKAGYTITAAPLV--VKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRR  197 (527)
T ss_pred             ccccccccccccCCcEE--ECC-EEEEeecccccCCCcEEEEEECCCCceeEec
Confidence            22111100011112211  122 344332      3688999999998876543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.41  E-value=0.14  Score=49.52  Aligned_cols=108  Identities=18%  Similarity=0.233  Sum_probs=53.0

Q ss_pred             cEEEEEECCCCCEEEE-----eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC------------
Q psy2671         462 LINCVEFSPDGRIIAS-----ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS------------  524 (573)
Q Consensus       462 ~v~~v~~sp~g~~las-----~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~------------  524 (573)
                      .+..=-|.|||..|.-     ++.+..|.-+|+.+++......  ..+...+--++||+++|-=+.|.            
T Consensus       239 ~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~  316 (386)
T PF14583_consen  239 SVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKI  316 (386)
T ss_dssp             EEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE--E-SEEEEEE-TTSSEEEEEE---------------
T ss_pred             ccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe--CCceeeeEEcCCCCEEEecCCCCCcccccccccee
Confidence            3444568999987653     2234467777888876433222  22445666789999987544442            


Q ss_pred             ----cEEEEeCCccccc---------ccccCcCC-CEEEEEEccCCCEEE-EeeCCCcEEEc
Q psy2671         525 ----TLKVWNMKTKKIE---------QDLPGHGD-EVYAVDWAPDGEKVA-SGGKDKVLRLW  571 (573)
Q Consensus       525 ----~v~vwd~~~~~~~---------~~l~~h~~-~v~~~~~s~d~~~l~-s~~~d~~i~iw  571 (573)
                          .|++++++.+...         ..+.+|.. .=....|||||++++ ++...|...||
T Consensus       317 ~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY  378 (386)
T PF14583_consen  317 ENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVY  378 (386)
T ss_dssp             ----EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEE
T ss_pred             cCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEE
Confidence                4667777665432         11222221 123578999999865 55666766655

>KOG4640|consensus

Probab=97.36  E-value=0.001  Score=66.16  Aligned_cols=92  Identities=17%  Similarity=0.235  Sum_probs=76.8

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE-EEEECCCCCEEEEEeCCCcEEEEeCCccccccc-
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY-MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-  539 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~-~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-  539 (573)
                      .+.-+.|+|.-.+||.+..+|.+-+.... .+.+.++.-|...+. +++|.|||++||.|-.||+|++-|+.++..+.. 
T Consensus        22 ~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   22 NIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF  100 (665)
T ss_pred             ceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence            36778999999999999999999998877 777888887777777 999999999999999999999999998877654 


Q ss_pred             ccCcCCCEEEEEEcc
Q psy2671         540 LPGHGDEVYAVDWAP  554 (573)
Q Consensus       540 l~~h~~~v~~~~~s~  554 (573)
                      +..-...|.++-|.+
T Consensus       101 ~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen  101 LFSVETDISKGIWDR  115 (665)
T ss_pred             ccccccchheeeccc
Confidence            223345778888864

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.35  E-value=0.11  Score=47.69  Aligned_cols=201  Identities=14%  Similarity=0.193  Sum_probs=107.5

Q ss_pred             cCCCccccEEEEEEcCCCC-eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~-~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .++|-.+.+++++|.|+.+ ++|.....+.|--.+.+ |+.+-+                                    
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~------------------------------------   58 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRR------------------------------------   58 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEE------------------------------------
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEE------------------------------------
Confidence            4567677799999999866 45555556666555542 322211                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe------eeE--Ee---cCCCCcE
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT------PLF--KC---EGHKHWV  252 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~------~~~--~~---~~h~~~V  252 (573)
                                       ..+.|. +..-.+++..++.++++.-.++.+.+.++....      ...  .+   ..++..+
T Consensus        59 -----------------i~l~g~-~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~  120 (248)
T PF06977_consen   59 -----------------IPLDGF-GDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGF  120 (248)
T ss_dssp             -----------------EE-SS--SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--
T ss_pred             -----------------EeCCCC-CCceeEEEECCCEEEEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcce
Confidence                             012232 335577787788777766668899888873321      111  11   1355678


Q ss_pred             EEEEEcCCCCeEEEEeeCCeEEEEECCC---Cceec----cc---ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         253 LCIAWSPDSKQLVSGCKNGVIHAWDSST---GKQIG----QP---MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       253 ~~v~~s~dg~~l~sgs~dg~i~vwd~~~---~~~~~----~~---~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      ..++|+|.++.|+.+-...-..++.+..   +..+.    ..   .......++++.+.|.    .+..++.+.....+.
T Consensus       121 EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~----t~~lliLS~es~~l~  196 (248)
T PF06977_consen  121 EGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPR----TGHLLILSDESRLLL  196 (248)
T ss_dssp             EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETT----TTEEEEEETTTTEEE
T ss_pred             EEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCC----CCeEEEEECCCCeEE
Confidence            9999999988888887776666666543   11110    00   1122334677887763    456777788888888


Q ss_pred             EEECCCCeEEEEecCCC---------ccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         323 IWDVILSQCVRVLTSHT---------RSVTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       323 iwd~~~~~~~~~~~~h~---------~~v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      .+| ..++.+..+.-..         ...-.+++.++|.|+..+.-+...+|
T Consensus       197 ~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f  247 (248)
T PF06977_consen  197 ELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF  247 (248)
T ss_dssp             EE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred             EEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence            888 4565554433211         24578889888988888876654443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1645|consensus

Probab=97.32  E-value=0.00085  Score=62.93  Aligned_cols=93  Identities=17%  Similarity=0.337  Sum_probs=75.0

Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-CEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-RLLV  518 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-~~la  518 (573)
                      +++.+..+.+. ...+.+|...|..++|||..+ ++..++.+.+|+|.|+++...+..+..| ..+++++|.-|. +++.
T Consensus       175 v~~l~~~~fks-sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IY  252 (463)
T KOG1645|consen  175 VQKLESHDFKS-SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIY  252 (463)
T ss_pred             eEEeccCCcch-hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeE
Confidence            55555444332 335667888899999999887 7888999999999999998888888888 789999999765 4677


Q ss_pred             EEeCCCcEEEEeCCccc
Q psy2671         519 SGSADSTLKVWNMKTKK  535 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~  535 (573)
                      .|-..|.|.+||++..+
T Consensus       253 aGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  253 AGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             EeccCceEEEEEccCCC
Confidence            88889999999997643

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.30  E-value=0.14  Score=53.65  Aligned_cols=142  Identities=15%  Similarity=0.163  Sum_probs=70.8

Q ss_pred             EEEEEEcCCCCeEEEEeCC-CeEEEE-----------ECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE--
Q psy2671         210 VISVKFSPNGRSLASGSGD-TTVRFW-----------DVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA--  275 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d-~~i~iw-----------d~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v--  275 (573)
                      .+.-.|+|||+.|++.+.. ..+++.           ++..+....   .....|..+.|||||.+|+.-. +|.|.+  
T Consensus       399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~  474 (591)
T PRK13616        399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAV  474 (591)
T ss_pred             CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEE
Confidence            5566799998888777533 223333           333222211   2245699999999999988755 466666  


Q ss_pred             -EECCCCc-eeccc--c-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE-EecC--CCccEEEEEE
Q psy2671         276 -WDSSTGK-QIGQP--M-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR-VLTS--HTRSVTCIRW  347 (573)
Q Consensus       276 -wd~~~~~-~~~~~--~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~--h~~~v~~~~~  347 (573)
                       -....|. .+..+  + .+-...+..+.|.+     ++ .|+.+..++...+|.+...-... .+..  ....+..++-
T Consensus       475 Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~-----~~-~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa  548 (591)
T PRK13616        475 VEQTEDGQYALTNPREVGPGLGDTAVSLDWRT-----GD-SLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAA  548 (591)
T ss_pred             EEeCCCCceeecccEEeecccCCccccceEec-----CC-EEEEEecCCCCceEEEecCCccccccCCCCccCceEEEec
Confidence             3333443 11111  1 11222345667754     22 35555555555555443221111 1122  1344555544


Q ss_pred             CCCcEEEEEeCCCeE
Q psy2671         348 GGSGLIYSASQDRTI  362 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i  362 (573)
                      ++ +.++....++.+
T Consensus       549 ~~-~~iyv~~~~g~~  562 (591)
T PRK13616        549 SP-STVYVTDARAVL  562 (591)
T ss_pred             CC-ceEEEEcCCceE
Confidence            43 345555555533

>KOG2444|consensus

Probab=97.25  E-value=0.0014  Score=57.16  Aligned_cols=108  Identities=19%  Similarity=0.242  Sum_probs=76.7

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEE-EEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-ce
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC-VEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-QA  504 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~-v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-~~  504 (573)
                      ..+..++.|+.+|.|++|+.........+...-...|.+ |.-..++.+..+++.||.|+.|+...++.+.....|. ..
T Consensus        68 ~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~  147 (238)
T KOG2444|consen   68 TASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFES  147 (238)
T ss_pred             ccCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCC
Confidence            446789999999999999876333222222222223332 3333456688899999999999999888777766676 56


Q ss_pred             EEEEEECCCCCEEEEE--eCCCcEEEEeCCcc
Q psy2671         505 VYMVAWSSDSRLLVSG--SADSTLKVWNMKTK  534 (573)
Q Consensus       505 v~~v~~s~dg~~las~--s~D~~v~vwd~~~~  534 (573)
                      +..+..+..+++++.+  |.|..++.|++..-
T Consensus       148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             cceeEEecCCceEEeeccccchhhhhcchhhh
Confidence            6666677778888888  89999999998653

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.20  E-value=0.011  Score=62.80  Aligned_cols=125  Identities=19%  Similarity=0.332  Sum_probs=81.3

Q ss_pred             CCCeEEEEcCCCCccceeeecccccc-EEEEEECCCC-------CEEEEeeCCCcEEEEeCCCCe--EEEe-ec--CCcc
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQL-INCVEFSPDG-------RIIASASFDKSIKLWDGRIGK--FITT-LR--GHVQ  503 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~-v~~v~~sp~g-------~~las~s~dg~i~lwd~~~~~--~~~~-~~--~h~~  503 (573)
                      ....++-.|++.++. +....-|... |.  .|.|+.       .-...|-.+..+..||+|...  ++.. ..  ....
T Consensus       502 ~~~~ly~mDLe~GKV-V~eW~~~~~~~v~--~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~  578 (794)
T PF08553_consen  502 NPNKLYKMDLERGKV-VEEWKVHDDIPVV--DIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN  578 (794)
T ss_pred             CCCceEEEecCCCcE-EEEeecCCCccee--EecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCC
Confidence            456677777776543 3333333322 33  333432       234456677889999998632  2211 11  1234


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      ...|++-+.+| +||+||.+|.||+||--.....-.+++-.++|.+|+.+.||+||+.....
T Consensus       579 ~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t  639 (794)
T PF08553_consen  579 NFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT  639 (794)
T ss_pred             CceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc
Confidence            56788877776 78899999999999954434444577888999999999999998755443

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG2444|consensus

Probab=97.17  E-value=0.0011  Score=57.72  Aligned_cols=138  Identities=16%  Similarity=0.138  Sum_probs=86.8

Q ss_pred             EEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-ee-cCCcceEEEEE
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-TL-RGHVQAVYMVA  509 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~~-~~h~~~v~~v~  509 (573)
                      +...+.|+.++-++.+..+........|...   ...-.-+..+++|+.+|.|.+|.....-... .. .+.....+.+.
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip  109 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIP  109 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccc
Confidence            4445667777777665443322222222221   1111234578899999999999865211110 00 11112223344


Q ss_pred             ECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC-CCEEEEEEccCCCEEEEe--eCCCcEEEcc
Q psy2671         510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-DEVYAVDWAPDGEKVASG--GKDKVLRLWQ  572 (573)
Q Consensus       510 ~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~-~~v~~~~~s~d~~~l~s~--~~d~~i~iw~  572 (573)
                      -..++.+..+++.|+.||.|++..++.+.....|+ .++..+..+..++.|+++  |.|..++.|+
T Consensus       110 ~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~  175 (238)
T KOG2444|consen  110 NGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWN  175 (238)
T ss_pred             cccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcc
Confidence            44566788999999999999999988887777787 566666667777888888  8888888886

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.14  E-value=0.34  Score=48.61  Aligned_cols=69  Identities=14%  Similarity=0.221  Sum_probs=46.2

Q ss_pred             cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      .+++..+++||+|++||.-..+|.+.+....-.+.+..+... ......+.|..+...++.-  ...+.+..
T Consensus       216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg  285 (410)
T PF04841_consen  216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVLSW--EDELLLVG  285 (410)
T ss_pred             CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEEEe--CCEEEEEC
Confidence            356999999999999999999999999876655555554433 2344567777654433332  33455544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG2395|consensus

Probab=97.07  E-value=0.0091  Score=58.46  Aligned_cols=145  Identities=19%  Similarity=0.335  Sum_probs=93.9

Q ss_pred             EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      +.++.....|.-.|+..|+.+..+.-+.. |+.+.+.++....-                              -....-
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Q------------------------------l~~e~T  397 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQ------------------------------LTSEQT  397 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhc------------------------------cccccc
Confidence            44555556777778888888888776655 55555544422110                              011223


Q ss_pred             EEEeCCCeEEEEcCCCCcc-ceeeecccc----ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE-EeecCCcceEE
Q psy2671         433 VSGSDDFTLFLWNPEKEKK-SLARMTGHQ----QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI-TTLRGHVQAVY  506 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~-~~~~~~~h~----~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~-~~~~~h~~~v~  506 (573)
                      +.|-.|+.|.-||++-... .+....+|+    ....|.+-..+| +||+||.+|.||+||- .+... ..+++-..+|.
T Consensus       398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~  475 (644)
T KOG2395|consen  398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIK  475 (644)
T ss_pred             EEeecCCceEEecccccCcceeeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCcee
Confidence            4577788899999874433 222223332    235566666665 7889999999999996 54433 44678888999


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      .+..+.||++|+..+ +..+.+-++
T Consensus       476 hVdvtadGKwil~Tc-~tyLlLi~t  499 (644)
T KOG2395|consen  476 HVDVTADGKWILATC-KTYLLLIDT  499 (644)
T ss_pred             eEEeeccCcEEEEec-ccEEEEEEE
Confidence            999999999987665 455655554

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.06  E-value=0.053  Score=42.02  Aligned_cols=64  Identities=22%  Similarity=0.340  Sum_probs=42.7

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC---CCC-eEEEEeeCCeEE
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP---DSK-QLVSGCKNGVIH  274 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~---dg~-~l~sgs~dg~i~  274 (573)
                      ++.|+++.-... ..++.|..+|+|-+|+-.  ..++..+.... +.++++..   ||. -|++|-.+|.|-
T Consensus        42 ~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWRiKSK~~-~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   42 TDKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWRIKSKNQ-VTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             ccceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeeeeccCCC-eEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            356777776666 458899999999999853  44555554333 66666543   332 588888888764

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=96.97  E-value=0.49  Score=47.47  Aligned_cols=65  Identities=14%  Similarity=0.070  Sum_probs=41.6

Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      ++.+....+....++.+.+.+....+.   +. ..+++..+++||+|++||.-..+|.+.+....-.+.
T Consensus       186 l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~  250 (410)
T PF04841_consen  186 LSSDRVVEILLANGETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEK  250 (410)
T ss_pred             eecCcceEEEEecCCEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccce
Confidence            444555555555556666444332211   22 135789999999999999999999998887544333

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.93  E-value=0.39  Score=48.41  Aligned_cols=138  Identities=13%  Similarity=0.166  Sum_probs=71.6

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM  288 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~  288 (573)
                      ....+.++|+|++++. ++||.-.|+.....+....-     .-...+|.+.+ .+|+-...+.|.++.--.........
T Consensus        34 ~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~~G-----~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i~  106 (443)
T PF04053_consen   34 YPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKAFG-----SGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKSIK  106 (443)
T ss_dssp             --SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEEEE-----E-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT----
T ss_pred             CCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccccC-----ceeEEEEecCc-cEEEEECCCeEEEEEcCccccceEEc
Confidence            4678999999999888 56788888885443333221     23457898855 46666668889986322111100100


Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                      ...  .+..+..        |..|...+. +.|.+||..+++.++.+...  .|..+.|++++.+++-..+.++.+.+
T Consensus       107 ~~~--~~~~If~--------G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~il~  171 (443)
T PF04053_consen  107 LPF--SVEKIFG--------GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIYILK  171 (443)
T ss_dssp             -SS---EEEEE---------SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEEE
T ss_pred             CCc--ccceEEc--------CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEEEEE
Confidence            011  1222221        445555544 47999999999888887643  38889999887443333344555544

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1008|consensus

Probab=96.79  E-value=0.00051  Score=68.25  Aligned_cols=166  Identities=20%  Similarity=0.323  Sum_probs=102.2

Q ss_pred             cCCCccccEEEEEEcC-CCCeeEEe----eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         105 SMPGHAEAVISVKFSP-NGRSLASG----SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~-~~~~lat~----s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      ..++|-..-++++|++ |.++||.|    ..|..+.|||+.++-...+                              +.
T Consensus        97 ~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPk------------------------------e~  146 (783)
T KOG1008|consen   97 VTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPK------------------------------ES  146 (783)
T ss_pred             ecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCc------------------------------cc
Confidence            3467888889999987 45677776    3467899999987621100                              00


Q ss_pred             eEEEEEeceeeEEEeeccccccCCC-CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMP-GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s  258 (573)
                                           ..+. +-...+.+++|-.+.+.+.+|.....+.++|++.... ....-.+..|..+..+
T Consensus       147 ---------------------~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~-~~~svnTk~vqG~tVd  204 (783)
T KOG1008|consen  147 ---------------------PLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD-SVSSVNTKYVQGITVD  204 (783)
T ss_pred             ---------------------cccccccccCccccccccCcchhhcccccchhhhhhhhhhhh-hhhhhhhhhcccceec
Confidence                                 0000 1223445888888888899998888999999873211 0111122345667777


Q ss_pred             C-CCCeEEEEeeCCeEEEEECC-CCceeccccc----CCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECC
Q psy2671         259 P-DSKQLVSGCKNGVIHAWDSS-TGKQIGQPMR----GHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI  327 (573)
Q Consensus       259 ~-dg~~l~sgs~dg~i~vwd~~-~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~  327 (573)
                      | .+.|+++-. ||.|.+||.. .-+.......    .....+..++|.|..   .| .+++.. ..++|+++|+.
T Consensus       205 p~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtr---tg-lla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  205 PFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTR---TG-LLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             CCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCC---cc-hhhhhccCcceEEEeccc
Confidence            7 677887765 9999999942 2111111111    112358899999854   23 344444 45789999974

>KOG2395|consensus

Probab=96.75  E-value=0.026  Score=55.41  Aligned_cols=130  Identities=22%  Similarity=0.337  Sum_probs=84.2

Q ss_pred             EEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCE-------EEEeeCCCcEEEEeCCCCe--EEEeecCC-
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI-------IASASFDKSIKLWDGRIGK--FITTLRGH-  501 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~-------las~s~dg~i~lwd~~~~~--~~~~~~~h-  501 (573)
                      +.++.....++-.|++.++. +....-+.+ |+-+.+.|+.+.       -+.|-.|..|.=||++-..  .+..-++| 
T Consensus       349 l~~~~~~~~l~klDIE~GKI-VeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKI-VEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             eeCCCCcCcceeeeccccee-eeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            34444455566666665432 333333333 677777776541       2335567888889987432  22233333 


Q ss_pred             ---cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         502 ---VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       502 ---~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                         .....|++-..+| ++|+||.+|-||+||--.......+++-.++|..++.+.||++|+....
T Consensus       427 y~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~  491 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCK  491 (644)
T ss_pred             cccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecc
Confidence               2335566666665 8889999999999998444444568899999999999999999875543

>KOG2079|consensus

Probab=96.61  E-value=0.0075  Score=64.02  Aligned_cols=101  Identities=19%  Similarity=0.329  Sum_probs=73.8

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce---E
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA---V  505 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~---v  505 (573)
                      +..++.|+..|.+...|....-..+..-..-+.+|++++|+.+|++++.|-.+|.|.+||...++.++.+..|..+   |
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v  178 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV  178 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence            4467888888888888766543322222223567999999999999999999999999999999888887765544   4


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      ..+.+..++..+.++..-|.  +|..
T Consensus       179 i~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  179 IFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             EEEEEeCCCcEEEEccCCCc--eEEE
Confidence            44555666777777776665  6654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.51  E-value=0.79  Score=43.59  Aligned_cols=249  Identities=18%  Similarity=0.241  Sum_probs=120.1

Q ss_pred             EEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC---CCc----EEEEEEcCCCCeEEEEee--CCeE
Q psy2671         213 VKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH---KHW----VLCIAWSPDSKQLVSGCK--NGVI  273 (573)
Q Consensus       213 ~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h---~~~----V~~v~~s~dg~~l~sgs~--dg~i  273 (573)
                      +..|||++.+.+++          ..-.|.+||..+..+.....-.   ...    ....++++||++++..-.  ...|
T Consensus        41 ~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SV  120 (342)
T PF06433_consen   41 VALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSV  120 (342)
T ss_dssp             EEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEE
T ss_pred             eeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeE
Confidence            45789999887654          2336999999998776654322   111    123578889988776543  4568


Q ss_pred             EEEECCCCceecccc-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC-CCeEEEE----ecCCCccE-EEEE
Q psy2671         274 HAWDSSTGKQIGQPM-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI-LSQCVRV----LTSHTRSV-TCIR  346 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~~~~~~~----~~~h~~~v-~~~~  346 (573)
                      -|-|+..++.+...- .|.   .  +.| |.    ..+.|.+-..||.+....+. .++..+.    +..-..++ ..-+
T Consensus       121 tVVDl~~~kvv~ei~~PGC---~--~iy-P~----~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~  190 (342)
T PF06433_consen  121 TVVDLAAKKVVGEIDTPGC---W--LIY-PS----GNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPA  190 (342)
T ss_dssp             EEEETTTTEEEEEEEGTSE---E--EEE-EE----ETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--E
T ss_pred             EEEECCCCceeeeecCCCE---E--EEE-ec----CCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccc
Confidence            888888776543221 111   1  111 11    12457777888988877775 3333221    11111111 1112


Q ss_pred             EC-CCcEEEEEeCCCeEEEEeCCCCeee--EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         347 WG-GSGLIYSASQDRTIKVWRASDGVMC--RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       347 ~~-~~~~l~s~s~d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      +. ..+.++--+..|.|.--++......  ..+.--.          +        ......|.|..-         ...
T Consensus       191 ~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t----------~--------~e~~~~WrPGG~---------Q~~  243 (342)
T PF06433_consen  191 YSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLT----------D--------AEKADGWRPGGW---------QLI  243 (342)
T ss_dssp             EETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-----------H--------HHHHTTEEE-SS---------S-E
T ss_pred             eECCCCeEEEEecCCEEEEEeccCCcccccCcccccC----------c--------cccccCcCCcce---------eee
Confidence            22 2234444566666665555433211  0000000          0        000000000000         000


Q ss_pred             eeCCCCcEEEEEe--------CCC--eEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEE-eeCCCcEEEEeCCC
Q psy2671         424 AQCPEGEKLVSGS--------DDF--TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIAS-ASFDKSIKLWDGRI  491 (573)
Q Consensus       424 ~~~~~~~~l~sg~--------~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las-~s~dg~i~lwd~~~  491 (573)
                      +.++....|....        .|+  .|.++|+.+.+. +.++.- ...+.+|.++.+.+ +|.+ ...++.+.+||..+
T Consensus       244 A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~kr-v~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t  321 (342)
T PF06433_consen  244 AYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKR-VARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT  321 (342)
T ss_dssp             EEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEE-EEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred             eeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeE-EEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence            1112222222111        112  456667776554 344332 23477899998877 5544 34689999999999


Q ss_pred             CeEEEeecC
Q psy2671         492 GKFITTLRG  500 (573)
Q Consensus       492 ~~~~~~~~~  500 (573)
                      |+.+.++..
T Consensus       322 Gk~~~~~~~  330 (342)
T PF06433_consen  322 GKLVRSIEQ  330 (342)
T ss_dssp             --EEEEE--
T ss_pred             CcEEeehhc
Confidence            999888763

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.49  E-value=0.91  Score=45.03  Aligned_cols=94  Identities=21%  Similarity=0.269  Sum_probs=59.6

Q ss_pred             EEEEcCCCCeEEEEeeCCeEEE---EECCC-C----ceec---ccccCC-cccEEEEEecccccC------CCCCEEEEE
Q psy2671         254 CIAWSPDSKQLVSGCKNGVIHA---WDSST-G----KQIG---QPMRGH-KQWITALSWEPFHLN------HQCRRFASS  315 (573)
Q Consensus       254 ~v~~s~dg~~l~sgs~dg~i~v---wd~~~-~----~~~~---~~~~~h-~~~v~~~~~~~~~~~------~~~~~l~s~  315 (573)
                      +++.+|+++.|+.|..+..+.+   |+... +    ....   ..+... ...|+++.|-|+...      .+...++.|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            4577889998888877776554   64321 1    1100   011111 268999999887332      235678999


Q ss_pred             eCCCcEEEEECCCCeEEEEecCCCccEEEEEEC
Q psy2671         316 GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       316 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~  348 (573)
                      -.+|.|++|.. ++..+..-..|..+|..+...
T Consensus        86 ~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~  117 (415)
T PF14655_consen   86 TSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCR  117 (415)
T ss_pred             ecccEEEEEec-cchHHHHHhcCccceEEEEec
Confidence            99999999986 444444444577788777763

>KOG1008|consensus

Probab=96.49  E-value=0.00098  Score=66.33  Aligned_cols=141  Identities=16%  Similarity=0.285  Sum_probs=95.4

Q ss_pred             cEEEEEeCCCeEEEEcCCCCccc-eeeeccccccEEEEEECC-CCCEEEEee----CCCcEEEEeCCCCe--EE--Eeec
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKS-LARMTGHQQLINCVEFSP-DGRIIASAS----FDKSIKLWDGRIGK--FI--TTLR  499 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp-~g~~las~s----~dg~i~lwd~~~~~--~~--~~~~  499 (573)
                      ..++.|..+|.|-+-..+..... .....+|....++++|++ |...||.|-    .|..+.|||..++-  +.  ..+.
T Consensus        71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs  150 (783)
T KOG1008|consen   71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS  150 (783)
T ss_pred             hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence            46788888898888766544333 345567788899999998 566777663    35569999987651  11  1122


Q ss_pred             C-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc-cccccccCcCCCEEEEEEcc-CCCEEEEeeCCCcEEEccC
Q psy2671         500 G-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK-KIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       500 ~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~-~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d~~i~iw~~  573 (573)
                      + -.....+++|-.|.+++.+|.....++++|++.. .....+  .+..+..+...| .+.++++-. |+.|.+|++
T Consensus       151 ~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~  224 (783)
T KOG1008|consen  151 SSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSV--NTKYVQGITVDPFSPNYFCSNS-DGDIAIWDT  224 (783)
T ss_pred             cccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhh--hhhhcccceecCCCCCceeccc-cCceeeccc
Confidence            2 2234557888889999999999999999999732 212222  122344556667 567787666 999999983

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=96.47  E-value=0.15  Score=39.58  Aligned_cols=91  Identities=19%  Similarity=0.268  Sum_probs=58.5

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV  508 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v  508 (573)
                      ...|+.|++|..||+|+-+.   .+..+.. .+.|.++.-... ..++-+-.+|+|-+|+...  .+...+.... +.++
T Consensus        15 ~~eLlvGs~D~~IRvf~~~e---~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~--RlWRiKSK~~-~~~~   86 (111)
T PF14783_consen   15 ENELLVGSDDFEIRVFKGDE---IVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ--RLWRIKSKNQ-VTSM   86 (111)
T ss_pred             cceEEEecCCcEEEEEeCCc---EEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCcc--eeeeeccCCC-eEEE
Confidence            35799999999999998442   3334433 345777776665 5688899999999998532  2333333223 4444


Q ss_pred             EEC-C--CCC-EEEEEeCCCcEE
Q psy2671         509 AWS-S--DSR-LLVSGSADSTLK  527 (573)
Q Consensus       509 ~~s-~--dg~-~las~s~D~~v~  527 (573)
                      ++. .  ||. -|++|-.+|.|-
T Consensus        87 ~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   87 AFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             EEEcCCCCCceEEEEEecCCeEE
Confidence            433 2  332 577888887764

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=96.42  E-value=1.5  Score=45.71  Aligned_cols=65  Identities=22%  Similarity=0.322  Sum_probs=41.8

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecC--CCCcEEEEEEcC---CCCeEEEEee------CCeEEEEECCCCceecc
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEG--HKHWVLCIAWSP---DSKQLVSGCK------NGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~--h~~~V~~v~~s~---dg~~l~sgs~------dg~i~vwd~~~~~~~~~  286 (573)
                      ..++.++.|+.+.-.|.++++.+.....  +... ..+.-+|   ++ .++.++.      +|.|.-+|.++|+.+.+
T Consensus       121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~-~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~  196 (527)
T TIGR03075       121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAG-YTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWR  196 (527)
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEeeccccccccc-ccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEe
Confidence            3567778899999999999998876542  1110 0111122   34 4555543      68999999999987643

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=96.39  E-value=0.97  Score=43.89  Aligned_cols=136  Identities=20%  Similarity=0.221  Sum_probs=75.6

Q ss_pred             EEEEEeCCCeEEEEcCCCCc-cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE--eCCCCeEEEeec-CCcceEE
Q psy2671         431 KLVSGSDDFTLFLWNPEKEK-KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLR-GHVQAVY  506 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw--d~~~~~~~~~~~-~h~~~v~  506 (573)
                      +++.+. .+.+.+|++.... ............+.++...  +.+|+.|.....+.++  +....+....-+ .....++
T Consensus       100 ~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~  176 (321)
T PF03178_consen  100 RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVT  176 (321)
T ss_dssp             EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEE
T ss_pred             EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEE
Confidence            444443 4788898877655 1111112122245555544  5699999988888877  432222222222 2345688


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCcc---------cccccc-cCcCCCEEEE---EEccC--CC------EEEEeeCC
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTK---------KIEQDL-PGHGDEVYAV---DWAPD--GE------KVASGGKD  565 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~---------~~~~~l-~~h~~~v~~~---~~s~d--~~------~l~s~~~d  565 (573)
                      ++.|-+|+..++.+..+|.+.++.....         ++.... ....+.|+++   ...|.  +.      .++-++.+
T Consensus       177 ~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~  256 (321)
T PF03178_consen  177 AAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVD  256 (321)
T ss_dssp             EEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETT
T ss_pred             EEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecC
Confidence            8888877779999999999999987631         111111 1234567777   44452  22      37778888


Q ss_pred             CcEE
Q psy2671         566 KVLR  569 (573)
Q Consensus       566 ~~i~  569 (573)
                      |.|.
T Consensus       257 G~Ig  260 (321)
T PF03178_consen  257 GSIG  260 (321)
T ss_dssp             S-EE
T ss_pred             CEEE
Confidence            8775

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.34  E-value=0.21  Score=49.99  Aligned_cols=133  Identities=23%  Similarity=0.276  Sum_probs=71.1

Q ss_pred             eCCCCcEEEE-EeCCCe--EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCc--EEEEeCCCCeEEEee
Q psy2671         425 QCPEGEKLVS-GSDDFT--LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKS--IKLWDGRIGKFITTL  498 (573)
Q Consensus       425 ~~~~~~~l~s-g~~dg~--i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~--i~lwd~~~~~~~~~~  498 (573)
                      ++|+|+.++- ...||.  |++.|+....  +..+..-...-..=.|+|||+.|+-.+ ..|.  |.++|...+.. ..+
T Consensus       245 fspDG~~l~f~~~rdg~~~iy~~dl~~~~--~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~ri  321 (425)
T COG0823         245 FSPDGSKLAFSSSRDGSPDIYLMDLDGKN--LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRL  321 (425)
T ss_pred             CCCCCCEEEEEECCCCCccEEEEcCCCCc--ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEe
Confidence            4577777654 445665  5555665543  222322222222457899999888554 4554  55556655443 222


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeCC-Cc--EEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSAD-ST--LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~D-~~--v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      ......-..-.|||||++++..+.. |.  |.+.++.++...+.+. +......-+|.++++.|..
T Consensus       322 T~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~  386 (425)
T COG0823         322 TFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMF  386 (425)
T ss_pred             eccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEE
Confidence            1111122256799999999877643 33  6666665554333332 2222333456666665543

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=96.34  E-value=0.07  Score=53.61  Aligned_cols=132  Identities=19%  Similarity=0.213  Sum_probs=71.6

Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ  503 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~  503 (573)
                      ..+|+|..++. ..||.-.++.....+.   ..   .+.-....|.++++ +|+-...++|.++.--..+....++-. .
T Consensus        39 s~npngr~v~V-~g~geY~iyt~~~~r~---k~---~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~k~i~~~-~  109 (443)
T PF04053_consen   39 SHNPNGRFVLV-CGDGEYEIYTALAWRN---KA---FGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVVKSIKLP-F  109 (443)
T ss_dssp             EE-TTSSEEEE-EETTEEEEEETTTTEE---EE---EEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT-----S-S
T ss_pred             EECCCCCEEEE-EcCCEEEEEEccCCcc---cc---cCceeEEEEecCcc-EEEEECCCeEEEEEcCccccceEEcCC-c
Confidence            34577888777 5566666666322221   11   12234578888554 666666888999742222221222211 1


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .+..+- .  |.+|+..+.+ .|.+||+.+++.++++...  +|..+.||+++.+++-.+.+. +.++
T Consensus       110 ~~~~If-~--G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~-i~il  170 (443)
T PF04053_consen  110 SVEKIF-G--GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDS-IYIL  170 (443)
T ss_dssp             -EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-S-EEEE
T ss_pred             ccceEE-c--CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCe-EEEE
Confidence            122222 2  8888877655 8999999999999888743  489999999999999887664 5554

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.16  E-value=0.018  Score=37.13  Aligned_cols=34  Identities=18%  Similarity=0.265  Sum_probs=29.5

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP  241 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~  241 (573)
                      ...|.+++|+|....||.|..||.|.++.+ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            356999999999999999999999999998 4443

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.16  E-value=0.99  Score=45.33  Aligned_cols=95  Identities=25%  Similarity=0.285  Sum_probs=53.4

Q ss_pred             eCCCCcEEEEEeCC-C--eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC-Cc--EEEEeCCCCeEEEee
Q psy2671         425 QCPEGEKLVSGSDD-F--TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD-KS--IKLWDGRIGKFITTL  498 (573)
Q Consensus       425 ~~~~~~~l~sg~~d-g--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d-g~--i~lwd~~~~~~~~~~  498 (573)
                      .+|+|+.++-.++. |  .|.+.+++....  .++......=..-.+||||++|+..+.. |.  |.+.|..++..++.+
T Consensus       289 ~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~--~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l  366 (425)
T COG0823         289 WSPDGSKIVFTSDRGGRPQIYLYDLEGSQV--TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL  366 (425)
T ss_pred             CCCCCCEEEEEeCCCCCcceEEECCCCCce--eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence            45888888766654 4  455556554433  2222221111256789999999977643 44  666666665533333


Q ss_pred             cCCcceEEEEEECCCCCEEEEEeC
Q psy2671         499 RGHVQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       499 ~~h~~~v~~v~~s~dg~~las~s~  522 (573)
                      .. ......-.|.++|+.+...+.
T Consensus       367 t~-~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         367 TS-TYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             cc-cccCCCCCcCCCCceEEEecc
Confidence            21 122234467788887665443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.16  E-value=1.3  Score=42.32  Aligned_cols=60  Identities=18%  Similarity=0.248  Sum_probs=42.6

Q ss_pred             ccEEEEEECCCCCEEEEeeCCC-cEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEEe
Q psy2671         461 QLINCVEFSPDGRIIASASFDK-SIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGS  521 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s~dg-~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~s  521 (573)
                      ...-.++...+|.+.+++..+| .|..|+.. |+++..+.-+...+++++|- |+.+.|...+
T Consensus       213 G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         213 GLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             CCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            3445577788888886555554 89999988 99888887776777888876 4455544443

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.04  E-value=0.053  Score=56.71  Aligned_cols=103  Identities=18%  Similarity=0.165  Sum_probs=63.7

Q ss_pred             ccEEEEEECCCCCEEEEee------CCC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---------
Q psy2671         461 QLINCVEFSPDGRIIASAS------FDK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---------  523 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s------~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---------  523 (573)
                      ..+...++||||+.+|..-      .|.  .+.+++. .+.......+.  ..+.-.|+|||+.|++.+..         
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~  426 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRD  426 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEecc
Confidence            4577899999999887654      244  4444454 22222223333  36778999999988776532         


Q ss_pred             ---CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         524 ---STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       524 ---~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                         +.+.+.++..++..+   ...+.|..+.|||||+.|+... ++.|++
T Consensus       427 ~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~V  472 (591)
T PRK13616        427 PATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYL  472 (591)
T ss_pred             CCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence               233333454444332   2345799999999999988655 355544

>PHA02713 hypothetical protein; Provisional

Probab=95.97  E-value=2  Score=45.25  Aligned_cols=72  Identities=8%  Similarity=0.137  Sum_probs=42.1

Q ss_pred             CCcEEEEEeCC------CeEEEEcCCC-Cc-cceeeeccccccEEEEEECCCCCEEEEeeCCC--cEEEEeCCCCeEEEe
Q psy2671         428 EGEKLVSGSDD------FTLFLWNPEK-EK-KSLARMTGHQQLINCVEFSPDGRIIASASFDK--SIKLWDGRIGKFITT  497 (573)
Q Consensus       428 ~~~~l~sg~~d------g~i~lwd~~~-~~-~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg--~i~lwd~~~~~~~~~  497 (573)
                      ++...+.|+.+      ..+..||+++ .. .....+.........+.+  +|++.++||.||  .+..||+.+.+....
T Consensus       463 ~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~  540 (557)
T PHA02713        463 KDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWNHI  540 (557)
T ss_pred             CCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCcccccccch
Confidence            45666667654      2467899886 32 222223222222222333  688999999998  778888887765443


Q ss_pred             ecCC
Q psy2671         498 LRGH  501 (573)
Q Consensus       498 ~~~h  501 (573)
                      ...|
T Consensus       541 ~~~~  544 (557)
T PHA02713        541 CHQH  544 (557)
T ss_pred             hhhc
Confidence            3334

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.92  E-value=0.2  Score=50.77  Aligned_cols=99  Identities=20%  Similarity=0.284  Sum_probs=62.6

Q ss_pred             EEEEEECCCCCEEEEe-eCCC----cEEEEeCCCCeEEEee-cCCcceEEEEEECCCCCEEEEEeCCC-----------c
Q psy2671         463 INCVEFSPDGRIIASA-SFDK----SIKLWDGRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGSADS-----------T  525 (573)
Q Consensus       463 v~~v~~sp~g~~las~-s~dg----~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~dg~~las~s~D~-----------~  525 (573)
                      +....+||||+++|-+ +..|    .++++|+.+|+.+... ..-  ....+.|.+|++.|+-...|.           .
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            4467899999998865 4444    4999999999876532 211  112389999988766554332           3


Q ss_pred             EEEEeCCccccc--ccccCcCC-C-EEEEEEccCCCEEEEee
Q psy2671         526 LKVWNMKTKKIE--QDLPGHGD-E-VYAVDWAPDGEKVASGG  563 (573)
Q Consensus       526 v~vwd~~~~~~~--~~l~~h~~-~-v~~~~~s~d~~~l~s~~  563 (573)
                      |+.|.+.+....  ..+..... . ...+..++|+++|+..+
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~  245 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISS  245 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEE
Confidence            788888765432  22222222 2 66889999999977543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG4441|consensus

Probab=95.82  E-value=1.1  Score=47.18  Aligned_cols=135  Identities=17%  Similarity=0.173  Sum_probs=73.4

Q ss_pred             CCcEEEEEeCCC-----eEEEEcCCCCccceeeeccccccEEEEE-ECCCCCEEEEeeCCC------cEEEEeCCCCeEE
Q psy2671         428 EGEKLVSGSDDF-----TLFLWNPEKEKKSLARMTGHQQLINCVE-FSPDGRIIASASFDK------SIKLWDGRIGKFI  495 (573)
Q Consensus       428 ~~~~l~sg~~dg-----~i~lwd~~~~~~~~~~~~~h~~~v~~v~-~sp~g~~las~s~dg------~i~lwd~~~~~~~  495 (573)
                      +|...|.|+.||     ++..||+.+.+-....  .......... ..-+|++.++||.++      ++..||..+.+..
T Consensus       380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va--~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~  457 (571)
T KOG4441|consen  380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVA--PMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWT  457 (571)
T ss_pred             CCEEEEEeccccccccccEEEecCCCCcccccC--CCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCcee
Confidence            467788888886     5677887765322111  0111111111 123688889998665      4678898877543


Q ss_pred             EeecCCcceE-EEEEECCCCCEEEEEeCCCc-----EEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         496 TTLRGHVQAV-YMVAWSSDSRLLVSGSADST-----LKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       496 ~~~~~h~~~v-~~v~~s~dg~~las~s~D~~-----v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                      ..-.-...+. ..++ .-++.+.+.||.|+.     |..||..+.+-  +..+......+..+.+  +++..+.||.|+.
T Consensus       458 ~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~  534 (571)
T KOG4441|consen  458 LIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGN  534 (571)
T ss_pred             ecCCcccccccceEE-EECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEecccCc
Confidence            2211111111 1122 236778888887763     77888876543  3333333333333322  4567778887764

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=95.79  E-value=2  Score=41.62  Aligned_cols=170  Identities=15%  Similarity=0.166  Sum_probs=90.0

Q ss_pred             CcEEEEECCCC----eEEEEe--cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCe-eeEeccC-CcceeeEEEecc
Q psy2671         319 GAIRIWDVILS----QCVRVL--TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV-MCRTLEG-HAHWVNTLALST  390 (573)
Q Consensus       319 g~v~iwd~~~~----~~~~~~--~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~-~~~~~~~-~~~~v~~~~~s~  390 (573)
                      |.+.++++...    ..++.+  ....++|.+++--.+ .++ ++..+.|.+|++.... +...-.- ....+.++.   
T Consensus        62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~-~lv-~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~---  136 (321)
T PF03178_consen   62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNG-RLV-VAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLS---  136 (321)
T ss_dssp             EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETT-EEE-EEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEE---
T ss_pred             cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCC-EEE-EeecCEEEEEEccCcccchhhheecceEEEEEEe---
Confidence            88999998873    222222  234678888876543 333 3345889999987665 2221110 001111111   


Q ss_pred             CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee--ccccccEEEEEE
Q psy2671         391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM--TGHQQLINCVEF  468 (573)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~  468 (573)
                                                          ..+++++.|...+.+.++........+..+  ......++++.|
T Consensus       137 ------------------------------------~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~  180 (321)
T PF03178_consen  137 ------------------------------------VFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEF  180 (321)
T ss_dssp             ------------------------------------EETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEE
T ss_pred             ------------------------------------ccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEE
Confidence                                                125578888777777665333222212222  123445888888


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCC-------C--eEEEeecCC-cceEEEE---EECCC--CC------EEEEEeCCCcEE
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRI-------G--KFITTLRGH-VQAVYMV---AWSSD--SR------LLVSGSADSTLK  527 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~-------~--~~~~~~~~h-~~~v~~v---~~s~d--g~------~las~s~D~~v~  527 (573)
                      -+++..++.+..+|.+.++....       +  +......-| ...|+++   ++.|.  +.      .++-++.+|.|-
T Consensus       181 l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig  260 (321)
T PF03178_consen  181 LVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIG  260 (321)
T ss_dssp             E-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EE
T ss_pred             ecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEE
Confidence            86767999999999999986431       2  222222222 2346666   44451  22      377788899887


Q ss_pred             EE
Q psy2671         528 VW  529 (573)
Q Consensus       528 vw  529 (573)
                      ..
T Consensus       261 ~l  262 (321)
T PF03178_consen  261 VL  262 (321)
T ss_dssp             EE
T ss_pred             EE
Confidence            43

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.78  E-value=2.6  Score=42.68  Aligned_cols=73  Identities=22%  Similarity=0.250  Sum_probs=47.3

Q ss_pred             cEEEEEEcCCCCeEEEE-eCC----CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC-----------e
Q psy2671         209 AVISVKFSPNGRSLASG-SGD----TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG-----------V  272 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~-s~d----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg-----------~  272 (573)
                      .+...++||||+++|-+ +..    .++++.|+.+++.+...-... ....+.|.+|++.|+....+.           .
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            34467899999998755 222    469999999997654321111 112499999988876655433           3


Q ss_pred             EEEEECCCCc
Q psy2671         273 IHAWDSSTGK  282 (573)
Q Consensus       273 i~vwd~~~~~  282 (573)
                      |+.|++.++.
T Consensus       204 v~~~~~gt~~  213 (414)
T PF02897_consen  204 VYRHKLGTPQ  213 (414)
T ss_dssp             EEEEETTS-G
T ss_pred             EEEEECCCCh
Confidence            6777776553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=95.77  E-value=0.95  Score=45.07  Aligned_cols=132  Identities=17%  Similarity=0.178  Sum_probs=89.6

Q ss_pred             CCCc-EEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---CCcEEEEeCCCCeEEEeecCCc
Q psy2671         427 PEGE-KLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---DKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       427 ~~~~-~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                      +.+. ..+....+..+.+.|.......-....+.  ....++++|+++.+..+..   ++++.+.|..+++.+.+...-.
T Consensus        83 ~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~  160 (381)
T COG3391          83 PAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN  160 (381)
T ss_pred             CCCCeEEEecCCCCeEEEEcCcccceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC
Confidence            3344 55566667889999966554433333333  4567999999987776654   7899999999988877754333


Q ss_pred             ceEEEEEECCCCCEEEEEe-CCCcEEEEeCCcccccc-----cccCcCCCEEEEEEccCCCEEEEe
Q psy2671         503 QAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQ-----DLPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~-----~l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      .+ ..++++|+|..++.+. .+++|.+.|.+.....+     ...-+. .-..+.++|+|+++...
T Consensus       161 ~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~-~P~~i~v~~~g~~~yV~  224 (381)
T COG3391         161 TP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGT-GPAGIAVDPDGNRVYVA  224 (381)
T ss_pred             Cc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCC-CCceEEECCCCCEEEEE
Confidence            34 7899999999766554 78899999987665542     122122 23567889999865443

>KOG2079|consensus

Probab=95.68  E-value=0.029  Score=59.80  Aligned_cols=95  Identities=22%  Similarity=0.252  Sum_probs=68.8

Q ss_pred             CCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEE
Q psy2671         472 GRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA  549 (573)
Q Consensus       472 g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~  549 (573)
                      +..++.|+..|.+-..|.... .-.-.+  .-..+|++++|+.||++++.|-.+|.|.+||+..++.++.+.-|..++++
T Consensus        99 ~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~  177 (1206)
T KOG2079|consen   99 VVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG  177 (1206)
T ss_pred             eeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence            456888888888888776542 111111  12468999999999999999999999999999999988877766655444


Q ss_pred             ---EEEccCCCEEEEeeCCCc
Q psy2671         550 ---VDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       550 ---~~~s~d~~~l~s~~~d~~  567 (573)
                         +.|..++..+.++...|.
T Consensus       178 vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  178 VIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             EEEEEEeCCCcEEEEccCCCc
Confidence               445555666777776664

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=95.67  E-value=0.046  Score=35.21  Aligned_cols=30  Identities=20%  Similarity=0.500  Sum_probs=27.8

Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ..|.+++|+|...+||.++.||.|.+|.++
T Consensus        12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   12 SRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            468899999999999999999999999983

>KOG4441|consensus

Probab=95.66  E-value=2  Score=45.16  Aligned_cols=103  Identities=20%  Similarity=0.332  Sum_probs=56.0

Q ss_pred             CCcEEEEEeCCC------eEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCCCc-----EEEEeCCCCeEE
Q psy2671         428 EGEKLVSGSDDF------TLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFDKS-----IKLWDGRIGKFI  495 (573)
Q Consensus       428 ~~~~l~sg~~dg------~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~dg~-----i~lwd~~~~~~~  495 (573)
                      +|...+.|+.++      ++..||+.++.-.. ..+..-.. -..++ .-++.+.+.||.|+.     |..||..+.+..
T Consensus       427 ~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~-~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~  504 (571)
T KOG4441|consen  427 GGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRS-GFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWT  504 (571)
T ss_pred             CCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccc-cceEE-EECCEEEEECCccCCCccceEEEEcCCCCcee
Confidence            466777777554      56778887653211 11111001 11122 236788999998873     777898876543


Q ss_pred             Ee--ecCCcceEEEEEECCCCCEEEEEeCCCc-----EEEEeCCcc
Q psy2671         496 TT--LRGHVQAVYMVAWSSDSRLLVSGSADST-----LKVWNMKTK  534 (573)
Q Consensus       496 ~~--~~~h~~~v~~v~~s~dg~~las~s~D~~-----v~vwd~~~~  534 (573)
                      ..  +......+..+.  -+++..++|+.|+.     |..||..+.
T Consensus       505 ~v~~m~~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  505 MVAPMTSPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             EcccCccccccccEEE--ECCEEEEEecccCccccceeEEcCCCCC
Confidence            32  222222222222  25677788887764     566665443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.58  E-value=0.98  Score=41.99  Aligned_cols=136  Identities=15%  Similarity=0.181  Sum_probs=79.1

Q ss_pred             CCCCcEEEEEe---CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe-CCCCeEE-EeecC
Q psy2671         426 CPEGEKLVSGS---DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD-GRIGKFI-TTLRG  500 (573)
Q Consensus       426 ~~~~~~l~sg~---~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd-~~~~~~~-~~~~~  500 (573)
                      ++++..++...   ....++++........  ...+  ..+..-.|++++.+.+....+...+++. ...++.. ..+..
T Consensus        32 S~dg~~~A~v~~~~~~~~L~~~~~~~~~~~--~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~  107 (253)
T PF10647_consen   32 SPDGSRVAAVSEGDGGRSLYVGPAGGPVRP--VLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDW  107 (253)
T ss_pred             CCCCCeEEEEEEcCCCCEEEEEcCCCccee--eccC--CccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecc
Confidence            45566555544   3335556554332221  1122  2567778999998888877777777773 3333221 11111


Q ss_pred             C--cceEEEEEECCCCCEEEEEe---CCCcEEEEeCC---cc--c----ccccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         501 H--VQAVYMVAWSSDSRLLVSGS---ADSTLKVWNMK---TK--K----IEQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       501 h--~~~v~~v~~s~dg~~las~s---~D~~v~vwd~~---~~--~----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      .  ...|..+++||||..+|.-.   .++.|.+=-+.   .+  .    ...........+.+++|.+++..++.+...
T Consensus       108 ~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~  186 (253)
T PF10647_consen  108 PGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSA  186 (253)
T ss_pred             cccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCC
Confidence            1  12799999999999877655   35667766542   22  1    111222334688999999998876655443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.41  E-value=0.42  Score=43.59  Aligned_cols=116  Identities=24%  Similarity=0.381  Sum_probs=75.8

Q ss_pred             EEEcCCCCccce-------eeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCC-eEEEeecCCcceEEEE
Q psy2671         442 FLWNPEKEKKSL-------ARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIG-KFITTLRGHVQAVYMV  508 (573)
Q Consensus       442 ~lwd~~~~~~~~-------~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~-~~~~~~~~h~~~v~~v  508 (573)
                      .++|+.....+.       ..+.||.      .|||||.+|...-.|     |.|-|||.+.+ +.+..+..|.-.-..+
T Consensus        94 ~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev  167 (366)
T COG3490          94 MVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEV  167 (366)
T ss_pred             EEECCCCCcCcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCccee
Confidence            456665544322       2345664      699999998876443     67999998854 4566777777667788


Q ss_pred             EECCCCCEEEEEeC------C------------CcEEEEeCCcccccc--ccc--CcCCCEEEEEEccCCCEEEEee
Q psy2671         509 AWSSDSRLLVSGSA------D------------STLKVWNMKTKKIEQ--DLP--GHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       509 ~~s~dg~~las~s~------D------------~~v~vwd~~~~~~~~--~l~--~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      .+.+||+.++.+..      |            -.+.+-|..++.++.  +|+  -+.-.|..++.-+||..++-+-
T Consensus       168 ~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQ  244 (366)
T COG3490         168 TLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQ  244 (366)
T ss_pred             EEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEE
Confidence            99999999987654      1            123344544555432  333  3455788888888887665543

>KOG1897|consensus

Probab=95.35  E-value=5.1  Score=43.29  Aligned_cols=103  Identities=15%  Similarity=0.208  Sum_probs=66.8

Q ss_pred             EEEEEECCC-CCEEEEeeC----------CCcEEEEeCCCCeEEEeecCC--cceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         463 INCVEFSPD-GRIIASASF----------DKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       463 v~~v~~sp~-g~~las~s~----------dg~i~lwd~~~~~~~~~~~~h--~~~v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                      +.++.|..| +.++++|..          .|.|.++....++.++....+  .+.++++.. -+|++||.  -...|++|
T Consensus       777 i~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~--In~~vrLy  853 (1096)
T KOG1897|consen  777 IISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAG--INQSVRLY  853 (1096)
T ss_pred             eeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEe--cCcEEEEE
Confidence            555568877 777877742          355666654443223322211  234454432 25777764  45689999


Q ss_pred             eCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671         530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL  568 (573)
Q Consensus       530 d~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i  568 (573)
                      +..+.+.++.-..|..++..+...-.|..++.|.-=+.+
T Consensus       854 e~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Si  892 (1096)
T KOG1897|consen  854 EWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSI  892 (1096)
T ss_pred             EccccceehhhhcccCCeEEEEEEecCcEEEEeeccceE
Confidence            998887777777788889999998888888888654443

>PHA02713 hypothetical protein; Provisional

Probab=95.12  E-value=2.3  Score=44.68  Aligned_cols=135  Identities=10%  Similarity=0.002  Sum_probs=70.7

Q ss_pred             CCcEEEEEeCCC-----eEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCCC-------------------
Q psy2671         428 EGEKLVSGSDDF-----TLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFDK-------------------  482 (573)
Q Consensus       428 ~~~~l~sg~~dg-----~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~dg-------------------  482 (573)
                      ++...+.|+.++     ++..||+.+..-.. ..+.........+.  -+|++.+.||.++                   
T Consensus       351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~  428 (557)
T PHA02713        351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDT  428 (557)
T ss_pred             CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccc
Confidence            456667777653     47888887543111 11111111111122  3688888888653                   


Q ss_pred             ----cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC------CcEEEEeCCc-c--cccccccCcCCCEEE
Q psy2671         483 ----SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD------STLKVWNMKT-K--KIEQDLPGHGDEVYA  549 (573)
Q Consensus       483 ----~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D------~~v~vwd~~~-~--~~~~~l~~h~~~v~~  549 (573)
                          .+..||+.+.+....-.-.......-+..-+|++.+.||.+      ..+..||..+ .  ..+..++........
T Consensus       429 ~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~  508 (557)
T PHA02713        429 HSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHT  508 (557)
T ss_pred             cccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccccccee
Confidence                47778888765432211111111111223356777777654      2467899876 3  334445443333333


Q ss_pred             EEEccCCCEEEEeeCCC
Q psy2671         550 VDWAPDGEKVASGGKDK  566 (573)
Q Consensus       550 ~~~s~d~~~l~s~~~d~  566 (573)
                      +..  +++..+.||.|+
T Consensus       509 ~~~--~~~iyv~Gg~~~  523 (557)
T PHA02713        509 ILH--DNTIMMLHCYES  523 (557)
T ss_pred             EEE--CCEEEEEeeecc
Confidence            333  678888898887

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=95.10  E-value=3.6  Score=40.10  Aligned_cols=86  Identities=20%  Similarity=0.176  Sum_probs=42.6

Q ss_pred             EEcCCCCeEEEEe-CCC--eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccC
Q psy2671         214 KFSPNGRSLASGS-GDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG  290 (573)
Q Consensus       214 ~fsp~g~~las~s-~d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~  290 (573)
                      +|.+||+.|+.++ .|+  .+.+-|+.+++....-.+.........++|+++.++-......|+.-|+++.+.. .....
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~-~vy~~  120 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER-VVYEV  120 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE-EEEE-
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE-EEEEC
Confidence            4788997665554 354  5666688887755443332222223456788888765555568888888886542 22233


Q ss_pred             CcccEEEEEe
Q psy2671         291 HKQWITALSW  300 (573)
Q Consensus       291 h~~~v~~~~~  300 (573)
                      ...++....|
T Consensus       121 p~~~~g~gt~  130 (386)
T PF14583_consen  121 PDDWKGYGTW  130 (386)
T ss_dssp             -TTEEEEEEE
T ss_pred             Ccccccccce
Confidence            3444444444

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=94.92  E-value=3  Score=38.34  Aligned_cols=199  Identities=14%  Similarity=0.234  Sum_probs=96.6

Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC-CccEEEEEECCCcEEEEEe-CCCeEEE
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH-TRSVTCIRWGGSGLIYSAS-QDRTIKV  364 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~l~s~s-~d~~i~v  364 (573)
                      .+.+-...+++++|.|.    .+..++.....+.|..++. .++.++.+... .+..-.+++.+++.++..+ .++.+.+
T Consensus        16 ~l~g~~~e~SGLTy~pd----~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~   90 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPD----TGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYI   90 (248)
T ss_dssp             E-TT--S-EEEEEEETT----TTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEE
T ss_pred             ECCCccCCccccEEcCC----CCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEE
Confidence            44555566999999873    3456777788888888886 46666665433 3557788888877655555 5888888


Q ss_pred             EeCCCCee---e---Eecc-----CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         365 WRASDGVM---C---RTLE-----GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       365 w~~~~~~~---~---~~~~-----~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      +++.....   .   ..+.     .+...+..+++.                                     +.+..|.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D-------------------------------------~~~~~L~  133 (248)
T PF06977_consen   91 FTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYD-------------------------------------PKTNRLF  133 (248)
T ss_dssp             EEE----TT--EEEEEEEE---S---SS--EEEEEE-------------------------------------TTTTEEE
T ss_pred             EEEeccccccchhhceEEecccccCCCcceEEEEEc-------------------------------------CCCCEEE
Confidence            87743210   0   0000     011112222222                                     3334444


Q ss_pred             EEeCCCeEEEEcCCC--Cccc--eee------eccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEee--cC
Q psy2671         434 SGSDDFTLFLWNPEK--EKKS--LAR------MTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTL--RG  500 (573)
Q Consensus       434 sg~~dg~i~lwd~~~--~~~~--~~~------~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~--~~  500 (573)
                      .+-+....+++....  ....  ...      .......+.++.|+|. |++++.+..+..+..+| ..|+.+..+  ..
T Consensus       134 v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~  212 (248)
T PF06977_consen  134 VAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDR  212 (248)
T ss_dssp             EEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-ST
T ss_pred             EEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCC
Confidence            444444444443321  1000  000      1112234788999985 56777777888899999 667655443  22


Q ss_pred             -C------cceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         501 -H------VQAVYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       501 -h------~~~v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                       .      ...--.|+|.++|.+.+++ .-+..++|
T Consensus       213 g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  213 GFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             TGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             cccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence             1      1234578999999766544 55544443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=94.80  E-value=3.8  Score=38.91  Aligned_cols=107  Identities=19%  Similarity=0.256  Sum_probs=59.0

Q ss_pred             cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe-CCcccc
Q psy2671         458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN-MKTKKI  536 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd-~~~~~~  536 (573)
                      +-...+..+..++||+++++++......-||.-.......-+.-...|..+.|+||+.+.+.+ ..+.|++=+ ....+.
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~  220 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGET  220 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEE
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccc
Confidence            334568888899999999998776666788754322222333345789999999998876655 777777765 222211


Q ss_pred             ----cccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         537 ----EQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       537 ----~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                          ...+..-.-.+..++|.+++...|+|+..
T Consensus       221 w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G  253 (302)
T PF14870_consen  221 WSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSG  253 (302)
T ss_dssp             E---B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred             cccccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence                11222223358999999987777766544

>KOG4460|consensus

Probab=94.62  E-value=0.52  Score=46.70  Aligned_cols=76  Identities=18%  Similarity=0.212  Sum_probs=51.4

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeC---------CCCeEEEeec-----------CCcceEEEEEECCCC---CEEE
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDG---------RIGKFITTLR-----------GHVQAVYMVAWSSDS---RLLV  518 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~---------~~~~~~~~~~-----------~h~~~v~~v~~s~dg---~~la  518 (573)
                      .|..|..++.|..+|-+|.+|.+.++=.         ..|+..-..+           ...-.+..++|+|++   ..|.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            3677888999999999999997766421         1232211111           111245678999986   5677


Q ss_pred             EEeCCCcEEEEeCCccccc
Q psy2671         519 SGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~  537 (573)
                      .-+.|+++|+||......+
T Consensus       185 iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  185 LLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             EEecCcEEEEEecCCcchh
Confidence            7788999999999765544

>KOG1916|consensus

Probab=94.51  E-value=0.019  Score=59.85  Aligned_cols=140  Identities=21%  Similarity=0.277  Sum_probs=78.2

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEE-----------ECCCCCEEEEeeCCCcEEEEeCC-----CC
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE-----------FSPDGRIIASASFDKSIKLWDGR-----IG  492 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~-----------~sp~g~~las~s~dg~i~lwd~~-----~~  492 (573)
                      ..++-.+-.++++++........  ..+.+|...+..++           .||||+.+|.++.||.++.|...     ..
T Consensus       195 ~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~  272 (1283)
T KOG1916|consen  195 KVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH  272 (1283)
T ss_pred             cceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence            34555666777887765443222  23445666554443           69999999999999999988643     22


Q ss_pred             eEEEeecCCc-ceEEEEEECCC-------C--CEEEEEeC-CCcEEEEeCCcccccccccCcCCCEEEEEEccCCC----
Q psy2671         493 KFITTLRGHV-QAVYMVAWSSD-------S--RLLVSGSA-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE----  557 (573)
Q Consensus       493 ~~~~~~~~h~-~~v~~v~~s~d-------g--~~las~s~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~----  557 (573)
                      +++...+.|. .+-.|.-+..+       +  .++++++. ...+++|.....+|+-..  --+.|..+. -+|++    
T Consensus       273 rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cll~~--~~d~v~iV~-p~~~~v~~~  349 (1283)
T KOG1916|consen  273 RCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCLLDK--LIDGVQIVG-PHDGEVTDL  349 (1283)
T ss_pred             hhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhhhhh--cccceEeec-CCCccccch
Confidence            3334444454 22222223321       1  24555554 456999998777765211  122333333 22222    


Q ss_pred             --------EEEEeeCCCcEEEccC
Q psy2671         558 --------KVASGGKDKVLRLWQN  573 (573)
Q Consensus       558 --------~l~s~~~d~~i~iw~~  573 (573)
                              .+++.+-|++|++|.|
T Consensus       350 ~~~~~~~~~~v~r~v~~~i~~~qn  373 (1283)
T KOG1916|consen  350 SMCQWMTTRLVSRSVDGTIKIWQN  373 (1283)
T ss_pred             hhhHHHHHHHHHhhhHHHHHHhhc
Confidence                    2345666778888864

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=93.86  E-value=5.9  Score=37.33  Aligned_cols=146  Identities=12%  Similarity=0.145  Sum_probs=79.6

Q ss_pred             CCCCeEEEEeCCCeEEEEECCC-CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc--------
Q psy2671         217 PNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP--------  287 (573)
Q Consensus       217 p~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~--------  287 (573)
                      ..++.|+.|..+| +.+++... ..+....  +...|..+...|+-+.|++-+ |+.+.++++..-......        
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~   80 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS   80 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence            3567899999888 89999832 2222222  223389999988877666544 499999998653322100        


Q ss_pred             -----ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-----eEEEEecCCCccEEEEEECCCcEEEEEe
Q psy2671         288 -----MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-----QCVRVLTSHTRSVTCIRWGGSGLIYSAS  357 (573)
Q Consensus       288 -----~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~l~s~s  357 (573)
                           .......+...+  .. ....+...+.......|.+|.....     +..+.+.. ...+.++.|.++ .++.|.
T Consensus        81 ~~~~~~~~~~~~v~~f~--~~-~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~~~-~i~v~~  155 (275)
T PF00780_consen   81 RSLPTKLPETKGVSFFA--VN-GGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFLGN-KICVGT  155 (275)
T ss_pred             ccccccccccCCeeEEe--ec-cccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEeCC-EEEEEe
Confidence                 001111222222  00 1112233344444558888876542     23333332 256778888744 444444


Q ss_pred             CCCeEEEEeCCCCee
Q psy2671         358 QDRTIKVWRASDGVM  372 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~  372 (573)
                      . +...+.|+.++..
T Consensus       156 ~-~~f~~idl~~~~~  169 (275)
T PF00780_consen  156 S-KGFYLIDLNTGSP  169 (275)
T ss_pred             C-CceEEEecCCCCc
Confidence            3 3466777776544

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=93.78  E-value=3  Score=39.36  Aligned_cols=132  Identities=16%  Similarity=0.247  Sum_probs=78.2

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe---------
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT---------  497 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~---------  497 (573)
                      ..++.|+.|.++| +.+++...........  +...|..+...|+-+.+++-+ |+.+.++++........         
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~   80 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS   80 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence            3578899999999 8888873332222222  223389999999877766654 59999999765433221         


Q ss_pred             -----ecCCcceEEEEE---ECCCCCEEEEEeCCCcEEEEeCCcc-----cccccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         498 -----LRGHVQAVYMVA---WSSDSRLLVSGSADSTLKVWNMKTK-----KIEQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       498 -----~~~h~~~v~~v~---~s~dg~~las~s~D~~v~vwd~~~~-----~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                           -......+..++   -...+.+|+.+. ..+|.+|.....     +..+.+. -.+.+.++.|.+  +.|+.|..
T Consensus        81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~~--~~i~v~~~  156 (275)
T PF00780_consen   81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFLG--NKICVGTS  156 (275)
T ss_pred             ccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEeC--CEEEEEeC
Confidence                 011122344444   122334555544 458998887653     2334433 236788999983  45666655


Q ss_pred             CC
Q psy2671         565 DK  566 (573)
Q Consensus       565 d~  566 (573)
                      ++
T Consensus       157 ~~  158 (275)
T PF00780_consen  157 KG  158 (275)
T ss_pred             Cc
Confidence            44

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.60  E-value=0.27  Score=30.66  Aligned_cols=30  Identities=27%  Similarity=0.553  Sum_probs=25.8

Q ss_pred             cEEEEEECCCC---CEEEEeeCCCcEEEEeCCC
Q psy2671         462 LINCVEFSPDG---RIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       462 ~v~~v~~sp~g---~~las~s~dg~i~lwd~~~  491 (573)
                      .|.++.|||+.   .+|+.+-.-|.|.|+|+++
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            58899999854   4899888889999999985

It contains a characteristic DLL sequence motif.

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.50  E-value=0.31  Score=30.40  Aligned_cols=31  Identities=35%  Similarity=0.412  Sum_probs=26.1

Q ss_pred             CcEEEEEEcCC-C--CeEEEEeCCCeEEEEECCC
Q psy2671         208 EAVISVKFSPN-G--RSLASGSGDTTVRFWDVTT  238 (573)
Q Consensus       208 ~~V~~~~fsp~-g--~~las~s~d~~i~iwd~~~  238 (573)
                      +.|.+++|||+ +  .+|+-+-.-+.|.|+|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            36889999985 4  5888888889999999985

It contains a characteristic DLL sequence motif.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=93.36  E-value=2.5  Score=39.32  Aligned_cols=100  Identities=25%  Similarity=0.351  Sum_probs=61.6

Q ss_pred             cEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe-CCccccc-
Q psy2671         462 LINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN-MKTKKIE-  537 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd-~~~~~~~-  537 (573)
                      .+.+.+++++|+.+|.-. .++.-.||-...+..... +.+.  .+..-.|++++...+....+...+++. ...++.. 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~--~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGG--SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCC--ccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            578899999999877655 233333333333332222 2332  567778999988777766677777774 2333221 


Q ss_pred             c--cccCcCCCEEEEEEccCCCEEEEee
Q psy2671         538 Q--DLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       538 ~--~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      .  ....-.+.|.++.+||||..+|...
T Consensus       103 ~~v~~~~~~~~I~~l~vSpDG~RvA~v~  130 (253)
T PF10647_consen  103 VEVDWPGLRGRITALRVSPDGTRVAVVV  130 (253)
T ss_pred             EEecccccCCceEEEEECCCCcEEEEEE
Confidence            1  1121222899999999999887655

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>KOG4499|consensus

Probab=93.33  E-value=5.6  Score=35.46  Aligned_cols=49  Identities=8%  Similarity=0.195  Sum_probs=42.2

Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671         465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       465 ~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                      .+++..+|++.++.-..++|...|..+|+.+.+++-....+++++|-..
T Consensus       216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecCC
Confidence            3555778899888888999999999999999999888889999999743

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=92.89  E-value=11  Score=37.57  Aligned_cols=207  Identities=17%  Similarity=0.186  Sum_probs=120.7

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC---CCeEEEEeCCCCeeeEeccCCcceeeE
Q psy2671         310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ---DRTIKVWRASDGVMCRTLEGHAHWVNT  385 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~---d~~i~vw~~~~~~~~~~~~~~~~~v~~  385 (573)
                      +.++....++.|.+.|..+.........-. ....+++.+++ .++.+..   ++++.+.|..++....+...-..+ . 
T Consensus        87 ~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~-  163 (381)
T COG3391          87 KVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-T-  163 (381)
T ss_pred             eEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-c-
Confidence            356666677899999976665554433211 34566776665 5555544   678888887776655442211000 1 


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE-eCCCeEEEEcCCCCccceee---eccccc
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG-SDDFTLFLWNPEKEKKSLAR---MTGHQQ  461 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-~~dg~i~lwd~~~~~~~~~~---~~~h~~  461 (573)
                                                          ..+..|+|..+... ..++.+.+.|.+........   ..+-..
T Consensus       164 ------------------------------------~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~  207 (381)
T COG3391         164 ------------------------------------GVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGT  207 (381)
T ss_pred             ------------------------------------eEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCC
Confidence                                                12234667644444 47788888886543211000   011112


Q ss_pred             cEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeC-CCcEEEEeCCcccc
Q psy2671         462 LINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKTKKI  536 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~~~~  536 (573)
                      .-..+.++|+|+.+.+.-..   +.+...|..++..... ..........+.++|+|+.+.+... .+.+.+-|..+...
T Consensus       208 ~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v  287 (381)
T COG3391         208 GPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRV  287 (381)
T ss_pred             CCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCce
Confidence            23568999999966654433   5899999988876554 2211113456789999999888744 47899988887665


Q ss_pred             cccccCcCC---CEEEEEEccC
Q psy2671         537 EQDLPGHGD---EVYAVDWAPD  555 (573)
Q Consensus       537 ~~~l~~h~~---~v~~~~~s~d  555 (573)
                      .........   .+..+++.+.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~  309 (381)
T COG3391         288 VKTGPTGNEALGEPVSIAISPL  309 (381)
T ss_pred             eeeecccccccccceeccceee
Confidence            544332222   3444555443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=92.78  E-value=9.4  Score=36.52  Aligned_cols=106  Identities=16%  Similarity=0.136  Sum_probs=62.2

Q ss_pred             ccccccEEEEEECCCCCEEEEeeC-CCcEEEEeCCC--C----eE-EEeecCCcceEEEEEECCCCCEEEEEeCCC-cEE
Q psy2671         457 TGHQQLINCVEFSPDGRIIASASF-DKSIKLWDGRI--G----KF-ITTLRGHVQAVYMVAWSSDSRLLVSGSADS-TLK  527 (573)
Q Consensus       457 ~~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~~--~----~~-~~~~~~h~~~v~~v~~s~dg~~las~s~D~-~v~  527 (573)
                      .++-..-+.|+||||++.+..+.. .+.|.-|+...  +    +. ...+..+.+.--.++...+|.+-+++-.+| .|.
T Consensus       159 ~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~  238 (307)
T COG3386         159 DDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVV  238 (307)
T ss_pred             cCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEE
Confidence            333344578999999988777754 46777776542  1    11 111222223333455666777765444444 899


Q ss_pred             EEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEee
Q psy2671         528 VWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGG  563 (573)
Q Consensus       528 vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~  563 (573)
                      .|+.. ++++..+.-....+.+++|-- +.+.|...+
T Consensus       239 ~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs  274 (307)
T COG3386         239 RFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS  274 (307)
T ss_pred             EECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence            99998 777665554445677777753 445554433

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=92.39  E-value=1.6  Score=45.61  Aligned_cols=100  Identities=19%  Similarity=0.322  Sum_probs=66.6

Q ss_pred             cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC--CCCCEEEEeeCCCcEEEEeCC---------CCeEEEee
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS--PDGRIIASASFDKSIKLWDGR---------IGKFITTL  498 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s--p~g~~las~s~dg~i~lwd~~---------~~~~~~~~  498 (573)
                      +..++-+...++.|||...............+.|..+.|.  |+|+.+++-|..+.|.+|-..         +...+..+
T Consensus        42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i  121 (631)
T PF12234_consen   42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKI  121 (631)
T ss_pred             cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEE
Confidence            3334444455799999887654443333456778898874  799999999999999998532         11223322


Q ss_pred             --cCCc-ceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         499 --RGHV-QAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       499 --~~h~-~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                        ..|+ .+|.+..|.++|.+++.++  +.+.|++-
T Consensus       122 ~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk  155 (631)
T PF12234_consen  122 DISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK  155 (631)
T ss_pred             EeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence              3333 4688999999998776554  46777764

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=92.37  E-value=2.4  Score=45.62  Aligned_cols=72  Identities=21%  Similarity=0.301  Sum_probs=50.9

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeCCC---------CeE---EEee--------cCCcceEEEEEECCC---CCEEE
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDGRI---------GKF---ITTL--------RGHVQAVYMVAWSSD---SRLLV  518 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~---------~~~---~~~~--------~~h~~~v~~v~~s~d---g~~la  518 (573)
                      .|..|.++|+|+++|..|..|.+.+.=.+.         |+.   .+++        ..+...|..+.|+|.   +.+|+
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~  165 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV  165 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence            488899999999999998877544432211         111   1111        123457889999996   47888


Q ss_pred             EEeCCCcEEEEeCCc
Q psy2671         519 SGSADSTLKVWNMKT  533 (573)
Q Consensus       519 s~s~D~~v~vwd~~~  533 (573)
                      .=..|+++|+||+..
T Consensus       166 vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  166 VLTSDNTLRLYDISD  180 (717)
T ss_pred             EEecCCEEEEEecCC
Confidence            889999999999965

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG1897|consensus

Probab=92.35  E-value=20  Score=39.16  Aligned_cols=121  Identities=13%  Similarity=0.096  Sum_probs=67.9

Q ss_pred             EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCC-CCCEEEEEeCCCcEEEEECCCCe
Q psy2671         252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH-QCRRFASSGKDGAIRIWDVILSQ  330 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~  330 (573)
                      ++..+.+.+..+++.++.++.+...++..+.........-+..|.|+.+.|..-.+ ..+.++.|.++..+.+.-.....
T Consensus       490 ~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~  569 (1096)
T KOG1897|consen  490 ITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDL  569 (1096)
T ss_pred             eEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCc
Confidence            34444455666788888888887777766542212222334578888888753222 23467888777766554322111


Q ss_pred             EEEE---ecC--CCccEEEEEECC-CcEEEEEeCCCeEEEEeC--CCCee
Q psy2671         331 CVRV---LTS--HTRSVTCIRWGG-SGLIYSASQDRTIKVWRA--SDGVM  372 (573)
Q Consensus       331 ~~~~---~~~--h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~--~~~~~  372 (573)
                      ....   +.+  -...|.-..+.. .+.++++..||.+..|.+  .+|..
T Consensus       570 ~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~l  619 (1096)
T KOG1897|consen  570 ILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQL  619 (1096)
T ss_pred             ceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceE
Confidence            1111   111  112344444545 568999999999987654  44443

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=92.18  E-value=21  Score=39.06  Aligned_cols=57  Identities=18%  Similarity=0.193  Sum_probs=38.3

Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEE---------EEEECC-CCC---EEEEEeCCCcEEEEeCCcccccc
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVY---------MVAWSS-DSR---LLVSGSADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~---------~v~~s~-dg~---~las~s~D~~v~vwd~~~~~~~~  538 (573)
                      +.|.-.|.++|+....++.....++         -+.+.. +|+   .++.++++|.+.+.|.++++.+.
T Consensus       414 ~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~  483 (764)
T TIGR03074       414 SSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIV  483 (764)
T ss_pred             ceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEe
Confidence            4566678888888776654111111         122333 664   78899999999999999998754

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=91.55  E-value=5.9  Score=39.27  Aligned_cols=99  Identities=16%  Similarity=0.229  Sum_probs=55.6

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeCCC-------CeEE-EeecC----CcceEEEEEECCCCCEEEEEeCC------
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDGRI-------GKFI-TTLRG----HVQAVYMVAWSSDSRLLVSGSAD------  523 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~-------~~~~-~~~~~----h~~~v~~v~~s~dg~~las~s~D------  523 (573)
                      ..+.+++.++| +++ ++.....++.|...       .+.+ ..+..    +......++|.|||.+.++-+..      
T Consensus        73 ~p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~  150 (367)
T TIGR02604        73 MVTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVT  150 (367)
T ss_pred             CccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceec
Confidence            35788999998 554 44444344445421       1112 22322    12346789999999876654421      


Q ss_pred             -------------CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         524 -------------STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       524 -------------~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                                   +.|.-++..+++....-.++. ..+.++|+++|+.+++-.
T Consensus       151 ~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~r-np~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       151 RPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQ-NPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             cCCCccCcccccCceEEEEecCCCeEEEEecCcC-CCccceECCCCCEEEEcc
Confidence                         335555555544432233433 346899999998776644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG4499|consensus

Probab=91.47  E-value=8.3  Score=34.45  Aligned_cols=92  Identities=15%  Similarity=0.169  Sum_probs=62.2

Q ss_pred             EEEEECCCCCEEE-EeeCCCcEEEEe--CCCCe-----EEEeecCC----cceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         464 NCVEFSPDGRIIA-SASFDKSIKLWD--GRIGK-----FITTLRGH----VQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       464 ~~v~~sp~g~~la-s~s~dg~i~lwd--~~~~~-----~~~~~~~h----~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      +.++|+.+.+.+. +-+.+-.|.-||  ..+|.     .+..++..    ...--.++...+|.+.++.-.-++|...|.
T Consensus       161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp  240 (310)
T KOG4499|consen  161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP  240 (310)
T ss_pred             ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence            5678887776544 556777887787  55553     23333321    001112334557777777777889999999


Q ss_pred             CcccccccccCcCCCEEEEEEccC
Q psy2671         532 KTKKIEQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       532 ~~~~~~~~l~~h~~~v~~~~~s~d  555 (573)
                      .+++.+..+.-....|++++|--.
T Consensus       241 ~tGK~L~eiklPt~qitsccFgGk  264 (310)
T KOG4499|consen  241 TTGKILLEIKLPTPQITSCCFGGK  264 (310)
T ss_pred             CCCcEEEEEEcCCCceEEEEecCC
Confidence            999999887777889999999754

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=91.34  E-value=3.9  Score=37.85  Aligned_cols=115  Identities=10%  Similarity=0.267  Sum_probs=82.3

Q ss_pred             ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       457 ~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      .|-...+.++.|+|+.+.|.+-.....-.++=...|+.+.++.  +- ..--.+++..+|+++++-=.++.+.++.+...
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~-~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGF-SDPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccccc-CChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            3444559999999999999888888888888777888887754  21 12235678888999888888999998887654


Q ss_pred             ccc----------ccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         535 KIE----------QDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       535 ~~~----------~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..+          ......+..--.++|.|.++.|..+-+-.-+.||.
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~  208 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFE  208 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEE
Confidence            221          11111134566899999999888887777666654

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=91.27  E-value=14  Score=36.84  Aligned_cols=140  Identities=15%  Similarity=0.196  Sum_probs=77.8

Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe-----EEEeecC
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK-----FITTLRG  500 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~-----~~~~~~~  500 (573)
                      ++++.+++.+..-..++-||.-...- ..........+..+.+.+++.+++++ .+|.+.. ....++     .......
T Consensus       247 ~~dG~~~~vg~~G~~~~s~d~G~~~W-~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~~~~  323 (398)
T PLN00033        247 SPDGDYVAVSSRGNFYLTWEPGQPYW-QPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEEADI  323 (398)
T ss_pred             cCCCCEEEEECCccEEEecCCCCcce-EEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceeeccc
Confidence            35566666665554445555322100 11112224568899999999988766 4555433 333332     1222221


Q ss_pred             --CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc---cccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         501 --HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI---EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       501 --h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~---~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                        ....++.+.|.+++..+++| ..|.+.... ..++.   ...-..-....+.+.|.++++.++ .|.+|.|.-|
T Consensus       324 ~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~-~G~~G~il~~  396 (398)
T PLN00033        324 KSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFV-LGNDGVLLRY  396 (398)
T ss_pred             CCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEE-EeCCcEEEEe
Confidence              12358889999888776655 567666654 33332   211122345788999988766555 5567776554

>PHA03098 kelch-like protein; Provisional

Probab=90.90  E-value=23  Score=37.18  Aligned_cols=104  Identities=15%  Similarity=0.180  Sum_probs=51.5

Q ss_pred             CCcEEEEEeCC------CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCCC--------cEEEEeCCCC
Q psy2671         428 EGEKLVSGSDD------FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFDK--------SIKLWDGRIG  492 (573)
Q Consensus       428 ~~~~l~sg~~d------g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~dg--------~i~lwd~~~~  492 (573)
                      ++...+.|+.+      ..+..||+.+..-.. ..+..... -.++ ...++++++.||.++        .+..||..+.
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~  466 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY-GGCA-IYHDGKIYVIGGISYIDNIKVYNIVESYNPVTN  466 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc-CceE-EEECCEEEEECCccCCCCCcccceEEEecCCCC
Confidence            34555666532      357788876542111 11110000 1112 223567777777532        3888998876


Q ss_pred             eEEEe--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy2671         493 KFITT--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK  535 (573)
Q Consensus       493 ~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~  535 (573)
                      +....  +.........+.  -++++++.|+.+     +.|.+||..+.+
T Consensus       467 ~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        467 KWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             ceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence            54322  211111111222  267777777654     468888877653

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.89  E-value=3.3  Score=38.08  Aligned_cols=99  Identities=20%  Similarity=0.255  Sum_probs=64.6

Q ss_pred             EEEECCCC-CEEEEeeCCCc-EEEEeCCCCeEEEeecCCcceEE--EEEECCCCCEEEEEeCC-----CcEEEEeCCcc-
Q psy2671         465 CVEFSPDG-RIIASASFDKS-IKLWDGRIGKFITTLRGHVQAVY--MVAWSSDSRLLVSGSAD-----STLKVWNMKTK-  534 (573)
Q Consensus       465 ~v~~sp~g-~~las~s~dg~-i~lwd~~~~~~~~~~~~h~~~v~--~v~~s~dg~~las~s~D-----~~v~vwd~~~~-  534 (573)
                      .++|+|.- +-++.+-.=|+ ..++|....+...++...++.-+  .=.|||||.+|+..-.|     |.|-|||.+.+ 
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f  151 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF  151 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence            46777743 34555554454 46788877765554432222111  12589999999876443     57999998743 


Q ss_pred             cccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         535 KIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ..+..+..|.-.-..+.|.+||+.|+.+.
T Consensus       152 qrvgE~~t~GiGpHev~lm~DGrtlvvan  180 (366)
T COG3490         152 QRVGEFSTHGIGPHEVTLMADGRTLVVAN  180 (366)
T ss_pred             ceecccccCCcCcceeEEecCCcEEEEeC
Confidence            34566777776667889999999988764

>PHA02790 Kelch-like protein; Provisional

Probab=90.86  E-value=18  Score=37.42  Aligned_cols=101  Identities=15%  Similarity=0.139  Sum_probs=48.5

Q ss_pred             CCcEEEEEeCCC---eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE--eecCCc
Q psy2671         428 EGEKLVSGSDDF---TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT--TLRGHV  502 (573)
Q Consensus       428 ~~~~l~sg~~dg---~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~--~~~~h~  502 (573)
                      +|...+.|+.++   .+..||+++..-...........-.++ ..-+|++.+.|+   .+..||.++.+...  .+....
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~-~~~~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~~r  437 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCA-LVFGRRLFLVGR---NAEFYCESSNTWTLIDDPIYPR  437 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceE-EEECCEEEEECC---ceEEecCCCCcEeEcCCCCCCc
Confidence            455666666543   467788765432111001111001122 234567777774   57789988765432  222111


Q ss_pred             ceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTK  534 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~  534 (573)
                      ... .++ .-+|+..+.||.+     .++..||..+.
T Consensus       438 ~~~-~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        438 DNP-ELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             ccc-EEE-EECCEEEEECCcCCCcccceEEEEECCCC
Confidence            112 222 2366777777754     23555655443

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.64  E-value=14  Score=34.31  Aligned_cols=164  Identities=12%  Similarity=0.189  Sum_probs=91.5

Q ss_pred             CCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671         106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY  185 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (573)
                      +.|-+..|+++.|+|+.+.|.+......-.||=...|..+-..                      +              
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gdlirti----------------------P--------------  124 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTI----------------------P--------------  124 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEe----------------------c--------------
Confidence            4455566999999999999888877666666644444332111                      0              


Q ss_pred             eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee----------EEecCCCCcEEEE
Q psy2671         186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL----------FKCEGHKHWVLCI  255 (573)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~----------~~~~~h~~~V~~v  255 (573)
                                       +.|-. .--.+.+..+|++.++--.++.+.++.+.....+          ......+.....+
T Consensus       125 -----------------L~g~~-DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGl  186 (316)
T COG3204         125 -----------------LTGFS-DPETIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGL  186 (316)
T ss_pred             -----------------ccccC-ChhHeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceee
Confidence                             11110 1123445555655555555666666655433211          1111225567889


Q ss_pred             EEcCCCCeEEEEeeCCeEEEEECCCCce-ec-ccccCCc-------ccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         256 AWSPDSKQLVSGCKNGVIHAWDSSTGKQ-IG-QPMRGHK-------QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       256 ~~s~dg~~l~sgs~dg~i~vwd~~~~~~-~~-~~~~~h~-------~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      ||.|....|+.+-.-.-+.++.++.+.. +. .....+.       .-|+++.|++.    .+..++-+.+++.+.-.|.
T Consensus       187 A~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~----~~~LLVLS~ESr~l~Evd~  262 (316)
T COG3204         187 AWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAI----TNSLLVLSDESRRLLEVDL  262 (316)
T ss_pred             ecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceecCC----CCcEEEEecCCceEEEEec
Confidence            9999999999888877777777654321 10 0111111       12445555442    3455666666666666555


Q ss_pred             C
Q psy2671         327 I  327 (573)
Q Consensus       327 ~  327 (573)
                      .
T Consensus       263 ~  263 (316)
T COG3204         263 S  263 (316)
T ss_pred             C
Confidence            3

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=90.63  E-value=3.2  Score=43.43  Aligned_cols=102  Identities=16%  Similarity=0.265  Sum_probs=64.8

Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEEC--CCCCEEEEEeCCCcEEEEeCCc---------ccc
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWS--SDSRLLVSGSADSTLKVWNMKT---------KKI  536 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s--~dg~~las~s~D~~v~vwd~~~---------~~~  536 (573)
                      |.-++.-++-+....+.|||.+.+.....-. ...+.|.++.|.  |||+.+++-|..+.|.+|.-..         ...
T Consensus        38 ss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~  117 (631)
T PF12234_consen   38 SSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAP  117 (631)
T ss_pred             cccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccce
Confidence            3444444444455679999998876443322 335678888886  7899998889999999985311         111


Q ss_pred             cc--cccCcC-CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         537 EQ--DLPGHG-DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       537 ~~--~l~~h~-~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++  .+..|+ .+|.+..|.++|..++.+  +..+.+++
T Consensus       118 i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~d  154 (631)
T PF12234_consen  118 IRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFD  154 (631)
T ss_pred             eEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEEC
Confidence            11  233444 578999999998655433  33455553

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PHA03098 kelch-like protein; Provisional

Probab=89.88  E-value=19  Score=37.81  Aligned_cols=132  Identities=17%  Similarity=0.146  Sum_probs=62.8

Q ss_pred             CCcEEEEEeCC-----CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCeEE
Q psy2671         428 EGEKLVSGSDD-----FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDGRIGKFI  495 (573)
Q Consensus       428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~~~~~~~  495 (573)
                      ++...+.|+.+     ..+..||+.+..-.. ..+. +...-.+++ .-++++.+.||.+      ..+..||..+.+..
T Consensus       342 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp-~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~  419 (534)
T PHA03098        342 NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLI-FPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS  419 (534)
T ss_pred             CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcC-cCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence            35566666654     356778876543111 1111 111111122 2357788888742      35788998776532


Q ss_pred             Ee--ecCCcceEEEEEECCCCCEEEEEeCC--------CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         496 TT--LRGHVQAVYMVAWSSDSRLLVSGSAD--------STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       496 ~~--~~~h~~~v~~v~~s~dg~~las~s~D--------~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ..  +....... + +...+++..+.||.+        ..+.+||..+.+-  +..++........+.  -+++.++.||
T Consensus       420 ~~~~~p~~r~~~-~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG  495 (534)
T PHA03098        420 KGSPLPISHYGG-C-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCI--FNNKIYVVGG  495 (534)
T ss_pred             ecCCCCccccCc-e-EEEECCEEEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEE--ECCEEEEEcC
Confidence            21  11111111 1 222356666777643        2388889876542  222221111112222  2667777777


Q ss_pred             CC
Q psy2671         564 KD  565 (573)
Q Consensus       564 ~d  565 (573)
                      .+
T Consensus       496 ~~  497 (534)
T PHA03098        496 DK  497 (534)
T ss_pred             Cc
Confidence            55

>KOG2247|consensus

Probab=89.55  E-value=0.05  Score=53.08  Aligned_cols=147  Identities=21%  Similarity=0.312  Sum_probs=96.3

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCCCceec
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~~~~~~  285 (573)
                      ........|-|.+..++.++.+..+..||-.. +..... ...+....++|..+|..++. +-..+.+.+||+.+.....
T Consensus        34 lv~pi~~~w~~e~~nlavaca~tiv~~YD~ag-q~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq  111 (615)
T KOG2247|consen   34 LVGPIIHRWRPEGHNLAVACANTIVIYYDKAG-QVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ  111 (615)
T ss_pred             ccccceeeEecCCCceehhhhhhHHHhhhhhc-ceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence            33445667888888899999999999999543 222221 22334567788888876654 5677899999987643211


Q ss_pred             ccccC-CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeE
Q psy2671         286 QPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI  362 (573)
Q Consensus       286 ~~~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i  362 (573)
                      -...+ |....  +.|++     ....++.+-..|.++|++..+.+.......|...+++++|...+..+.++.|..+
T Consensus       112 LE~gg~~s~sl--l~wsK-----g~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L  182 (615)
T KOG2247|consen  112 LESGGTSSKSL--LAWSK-----GTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTL  182 (615)
T ss_pred             HhccCcchHHH--Hhhcc-----CCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHH
Confidence            01111 11111  33433     2344566667899999998887766666669999999999988877777766543

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=89.54  E-value=16  Score=37.45  Aligned_cols=118  Identities=19%  Similarity=0.297  Sum_probs=68.4

Q ss_pred             CCCCcEEEEEEcCC----CCeEEEEeCCCeEEEEECCC-----CeeeE--EecC-CCCcE--EEEEEcCCCCeEEEEeeC
Q psy2671         205 GHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTT-----QTPLF--KCEG-HKHWV--LCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       205 gh~~~V~~~~fsp~----g~~las~s~d~~i~iwd~~~-----~~~~~--~~~~-h~~~V--~~v~~s~dg~~l~sgs~d  270 (573)
                      |.-+-|..+.|+|-    -..|.+....+.|.+|.+..     .+.+.  +++- ..-+|  ..+.|+|....|+.-...
T Consensus        54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~  133 (671)
T PF15390_consen   54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR  133 (671)
T ss_pred             eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC
Confidence            55567899999985    33566667788999998752     12221  1111 01111  345699988877765554


Q ss_pred             CeEEEEECCCCc-eecccccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCC
Q psy2671         271 GVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVIL  328 (573)
Q Consensus       271 g~i~vwd~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~  328 (573)
                      ..-.+.+++... ++...+ ...+.|.+.+|.+     +|.+|+.+ |..=.-.+||-..
T Consensus       134 dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~-----DG~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  134 DVSVLPSVHCDSSRVKADI-KTSGLIHCACWTK-----DGQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             ceeEeeeeeeCCceEEEec-cCCceEEEEEecC-----cCCEEEEEeCCeEEEEEecCch
Confidence            444445554322 222222 3456789999976     66676554 4444567888643

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=88.25  E-value=44  Score=36.62  Aligned_cols=113  Identities=18%  Similarity=0.198  Sum_probs=69.1

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCC--------cEEEEEEcC----------------CCCeEEEEeeCCeEE
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH--------WVLCIAWSP----------------DSKQLVSGCKNGVIH  274 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~--------~V~~v~~s~----------------dg~~l~sgs~dg~i~  274 (573)
                      +..|..++.++.|.-.|..+++.+.++.....        ..+.+++..                .+.+|+.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            55677778888888889999888877643221        012233321                344788999999999


Q ss_pred             EEECCCCceecccccCCcccE-------------EEEEecccccCCCCCEEEEEeC----------CCcEEEEECCCCeE
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWI-------------TALSWEPFHLNHQCRRFASSGK----------DGAIRIWDVILSQC  331 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v-------------~~~~~~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~  331 (573)
                      -.|.++|+.....  +....|             ....-.|.-   .+..++.++.          +|.|+-+|..+++.
T Consensus       274 ALDA~TGk~~W~f--g~~G~vdl~~~~g~~~~g~~~~ts~P~V---~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl  348 (764)
T TIGR03074       274 ALDADTGKLCEDF--GNNGTVDLTAGMGTTPPGYYYPTSPPLV---AGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGAL  348 (764)
T ss_pred             EEECCCCCEEEEe--cCCCceeeecccCcCCCcccccccCCEE---ECCEEEEEecccccccccCCCcEEEEEECCCCcE
Confidence            9999999876432  111111             001111111   1234555532          68899999999987


Q ss_pred             EEEec
Q psy2671         332 VRVLT  336 (573)
Q Consensus       332 ~~~~~  336 (573)
                      +-.+.
T Consensus       349 ~W~~~  353 (764)
T TIGR03074       349 VWAWD  353 (764)
T ss_pred             eeEEe
Confidence            76553

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG2377|consensus

Probab=88.19  E-value=19  Score=35.63  Aligned_cols=100  Identities=12%  Similarity=0.185  Sum_probs=69.0

Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      ..++|.++.||+|.+.||+--.|.+|.+++....+.    ..+.+.....|..+.|+.+ .-+|--+. ..+-+|....-
T Consensus        65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~-~G~e~y~v~pe  142 (657)
T KOG2377|consen   65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITD-QGIEFYQVLPE  142 (657)
T ss_pred             CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEec-CCeEEEEEchh
Confidence            456899999999999999999999999998633221    2223334455888899866 44554443 34777766433


Q ss_pred             -cccccccCcCCCEEEEEEccCCCEEE
Q psy2671         535 -KIEQDLPGHGDEVYAVDWAPDGEKVA  560 (573)
Q Consensus       535 -~~~~~l~~h~~~v~~~~~s~d~~~l~  560 (573)
                       ..++..+.|.-.|+.-.|-++.+.+.
T Consensus       143 krslRlVks~~~nvnWy~yc~et~v~L  169 (657)
T KOG2377|consen  143 KRSLRLVKSHNLNVNWYMYCPETAVIL  169 (657)
T ss_pred             hhhhhhhhhcccCccEEEEccccceEe
Confidence             23455667777888888888877644

>KOG1916|consensus

Probab=88.02  E-value=0.56  Score=49.57  Aligned_cols=103  Identities=15%  Similarity=0.195  Sum_probs=62.6

Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE-----------EECCCCCEEEEEeCCCcEEEEeCC-cc-
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV-----------AWSSDSRLLVSGSADSTLKVWNMK-TK-  534 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v-----------~~s~dg~~las~s~D~~v~vwd~~-~~-  534 (573)
                      |-++..++..+-.++.|++....+.. ...+++|..++..+           ..||||+.+|.++.||.+++|.+. ++ 
T Consensus       191 ~~~~~~~ic~~~~~~~i~lL~~~ra~-~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~  269 (1283)
T KOG1916|consen  191 IAVNKVYICYGLKGGEIRLLNINRAL-RSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGK  269 (1283)
T ss_pred             cccccceeeeccCCCceeEeeechHH-HHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeecc
Confidence            34455567777788888887654432 14456676665443           368999999999999999999874 22 


Q ss_pred             ---cccccccCcCC--CEEEEEEccC-------CC--EEEEee-CCCcEEEcc
Q psy2671         535 ---KIEQDLPGHGD--EVYAVDWAPD-------GE--KVASGG-KDKVLRLWQ  572 (573)
Q Consensus       535 ---~~~~~l~~h~~--~v~~~~~s~d-------~~--~l~s~~-~d~~i~iw~  572 (573)
                         .++...+.|.+  .|+.+ |..+       ++  ++++++ ....+++|.
T Consensus       270 ~~~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~  321 (1283)
T KOG1916|consen  270 IVHRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWA  321 (1283)
T ss_pred             ccHhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEee
Confidence               23444455542  34444 4432       12  233333 335688885

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=87.49  E-value=10  Score=36.86  Aligned_cols=102  Identities=20%  Similarity=0.334  Sum_probs=56.0

Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE---EEee----cCCcceEEEEEECCC----CCEEEEEeCC--------
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKF---ITTL----RGHVQAVYMVAWSSD----SRLLVSGSAD--------  523 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~---~~~~----~~h~~~v~~v~~s~d----g~~las~s~D--------  523 (573)
                      -..|+|.|||+++++ ...|.|++++ ..+..   +..+    .........++++|+    +.+.++.+..        
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            468999999988775 5599999998 44432   2222    223456889999995    3333333321        


Q ss_pred             CcEEEEeCCcc-------c-ccccccC---cCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         524 STLKVWNMKTK-------K-IEQDLPG---HGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       524 ~~v~vwd~~~~-------~-~~~~l~~---h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      ..|.-|.....       + ++..++.   ....-..|.|.|||...++.|..+
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence            23444444322       1 1112222   222456799999997777766543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=87.34  E-value=7.1  Score=38.99  Aligned_cols=60  Identities=20%  Similarity=0.223  Sum_probs=44.8

Q ss_pred             CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       472 g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .-++|.||..|-|++||--.-+.-..+++-...|-.+..+.+|+++++.+. ..+.+-|++
T Consensus       573 sGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~  632 (776)
T COG5167         573 SGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP  632 (776)
T ss_pred             CceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence            458999999999999994332333446667778999999999999877665 456666664

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=87.10  E-value=28  Score=33.15  Aligned_cols=141  Identities=17%  Similarity=0.243  Sum_probs=73.9

Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe-CCCCeEEEe----ecC
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD-GRIGKFITT----LRG  500 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd-~~~~~~~~~----~~~  500 (573)
                      .++|.++++++......-||.-...- ......-...|..+.|+|++.+.+.+ ..|.|+.=+ ....+....    ++.
T Consensus       153 ~~dG~~vavs~~G~~~~s~~~G~~~w-~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~  230 (302)
T PF14870_consen  153 SSDGRYVAVSSRGNFYSSWDPGQTTW-QPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKT  230 (302)
T ss_dssp             -TTS-EEEEETTSSEEEEE-TT-SS--EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS
T ss_pred             CCCCcEEEEECcccEEEEecCCCccc-eEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCccc
Confidence            36788888776666667887543211 11222235679999999998876655 788888776 222222111    111


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc---cccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI---EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~---~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      -.-.+..++|.+++...|+|+. |++ +.....++.   ......-....+.+.|.++.+- ..-|.+|.|.-|
T Consensus       231 ~~~~~ld~a~~~~~~~wa~gg~-G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~g-f~lG~~G~ll~~  301 (302)
T PF14870_consen  231 NGYGILDLAYRPPNEIWAVGGS-GTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKG-FVLGQDGVLLRY  301 (302)
T ss_dssp             --S-EEEEEESSSS-EEEEEST-T-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEE-EEE-STTEEEEE
T ss_pred             CceeeEEEEecCCCCEEEEeCC-ccE-EEeCCCCccceECccccCCCCceEEEEEcCCCce-EEECCCcEEEEe
Confidence            2234789999999888887664 433 334444442   2222233456888999876544 446678876555

>PRK13684 Ycf48-like protein; Provisional

Probab=87.07  E-value=31  Score=33.60  Aligned_cols=151  Identities=13%  Similarity=0.130  Sum_probs=79.2

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEE-EEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVR-FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~-iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      ...+.++.+.|++.+++++. .|.+. -++-....-.....+-...+.++++.++++.+++| ..|.+++=..+.|..-.
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~  249 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWS  249 (334)
T ss_pred             cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccc
Confidence            45788999999987776654 44433 22211111111122334568999999998866654 56766532334443211


Q ss_pred             ccc---cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec---CCCccEEEEEECCCcEEEEEeCC
Q psy2671         286 QPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT---SHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       286 ~~~---~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      ...   ......+.++.+.|     ++. +..++.+|.+.. ....++.-....   .-......+.+..++..+..+..
T Consensus       250 ~~~~~~~~~~~~l~~v~~~~-----~~~-~~~~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  322 (334)
T PRK13684        250 KPIIPEITNGYGYLDLAYRT-----PGE-IWAGGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQR  322 (334)
T ss_pred             cccCCccccccceeeEEEcC-----CCC-EEEEcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECCC
Confidence            111   11122355666544     233 445566775543 333222211111   11234666777666677778888


Q ss_pred             CeEEEEe
Q psy2671         360 RTIKVWR  366 (573)
Q Consensus       360 ~~i~vw~  366 (573)
                      |.|-.|+
T Consensus       323 G~il~~~  329 (334)
T PRK13684        323 GVLLRYV  329 (334)
T ss_pred             ceEEEec
Confidence            8887665

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=86.91  E-value=4.5  Score=35.04  Aligned_cols=28  Identities=25%  Similarity=0.455  Sum_probs=23.5

Q ss_pred             CCEEEEEEccCC------CEEEEeeCCCcEEEcc
Q psy2671         545 DEVYAVDWAPDG------EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       545 ~~v~~~~~s~d~------~~l~s~~~d~~i~iw~  572 (573)
                      ..|.+++|||.|      -.||.-..++.|.||.
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~  119 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYG  119 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEe
Confidence            378899999954      4688999999999985

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG3630|consensus

Probab=86.81  E-value=3.4  Score=45.26  Aligned_cols=95  Identities=18%  Similarity=0.229  Sum_probs=61.8

Q ss_pred             CcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC--cee
Q psy2671         208 EAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG--KQI  284 (573)
Q Consensus       208 ~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~--~~~  284 (573)
                      ..+.++.|+|.- ...|....|+.|++..+.-.......-.-...++|++|+|.|++++.|-..|++.-|...-.  +.+
T Consensus       156 vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~i  235 (1405)
T KOG3630|consen  156 VFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEI  235 (1405)
T ss_pred             cccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecc
Confidence            345678888853 24566778888988876543222222233456899999999999999999999999976543  122


Q ss_pred             cccccCCcccEEEEEecc
Q psy2671         285 GQPMRGHKQWITALSWEP  302 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~  302 (573)
                      ..+-......|.+++|..
T Consensus       236 p~Pp~~e~yrvl~v~Wl~  253 (1405)
T KOG3630|consen  236 PEPPVEENYRVLSVTWLS  253 (1405)
T ss_pred             cCCCcCCCcceeEEEEec
Confidence            111111245678888743

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=86.61  E-value=5.3  Score=36.11  Aligned_cols=64  Identities=13%  Similarity=0.213  Sum_probs=48.6

Q ss_pred             ECCCCCEEEEeeCCCcEEEEeCCCCeEEEe-------ec-------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         468 FSPDGRIIASASFDKSIKLWDGRIGKFITT-------LR-------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       468 ~sp~g~~las~s~dg~i~lwd~~~~~~~~~-------~~-------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +..++++|.+-+.+|.+++||+.+++.+..       +.       .....|..+.++.+|.-|++-+ +|..+.|+..
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~   95 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD   95 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence            445688899999999999999998875432       22       2446788899999998887765 5778888764

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=86.60  E-value=5.5  Score=36.01  Aligned_cols=66  Identities=12%  Similarity=0.224  Sum_probs=49.0

Q ss_pred             EcCCCCeEEEEeCCCeEEEEECCCCeeeEEe-------c-------CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-------E-------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       215 fsp~g~~las~s~d~~i~iwd~~~~~~~~~~-------~-------~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      +..++.+|++-..+|.+++||+.+++.+...       .       .....|..+.++.+|.-|++- .+|....|+..-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEecccc
Confidence            5567889999999999999999987654332       1       345668888899888766654 457788888654


Q ss_pred             C
Q psy2671         281 G  281 (573)
Q Consensus       281 ~  281 (573)
                      +
T Consensus        97 ~   97 (219)
T PF07569_consen   97 G   97 (219)
T ss_pred             c
Confidence            3

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=85.88  E-value=6.3  Score=39.29  Aligned_cols=83  Identities=17%  Similarity=0.246  Sum_probs=57.2

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc----EEEEEEcCC--------------CCe
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW----VLCIAWSPD--------------SKQ  263 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~----V~~v~~s~d--------------g~~  263 (573)
                      .+......+.++..+|++++.|+...=|.|.++|+.++..+...+|-++.    +....-...              ..+
T Consensus       302 ~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~  381 (415)
T PF14655_consen  302 GLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALF  381 (415)
T ss_pred             eeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEE
Confidence            44556677889999999998888777799999999998877777665432    111111111              112


Q ss_pred             -EEEEeeCCeEEEEECCCCcee
Q psy2671         264 -LVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       264 -l~sgs~dg~i~vwd~~~~~~~  284 (573)
                       ++-+-.-|.|.+|.++.|.++
T Consensus       382 LvIyaprRg~lEvW~~~~g~Rv  403 (415)
T PF14655_consen  382 LVIYAPRRGILEVWSMRQGPRV  403 (415)
T ss_pred             EEEEeccCCeEEEEecCCCCEE
Confidence             334677899999999888654

>KOG3616|consensus

Probab=85.43  E-value=30  Score=36.49  Aligned_cols=67  Identities=13%  Similarity=0.269  Sum_probs=44.9

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd  277 (573)
                      ....++++.-+|.|+-+++++.||.|++|++...+.  +.+...   +-..+.|...|  |+++..|..+.-|.
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~---p~~nlv~tnhg--l~~~tsdrr~la~~   81 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAK---PKENLVFTNHG--LVTATSDRRALAWK   81 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcC---Cccceeeeccc--eEEEeccchhheee
Confidence            455678888889999999999999999999876543  222211   12334555444  55666666666664

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=84.66  E-value=16  Score=38.89  Aligned_cols=116  Identities=12%  Similarity=0.145  Sum_probs=75.9

Q ss_pred             EEEEEEc--CCCCeEEEEeCCCeEEEEECCC-------C-------------eeeEEecCCCCcEEEEEEc--CCCCeEE
Q psy2671         210 VISVKFS--PNGRSLASGSGDTTVRFWDVTT-------Q-------------TPLFKCEGHKHWVLCIAWS--PDSKQLV  265 (573)
Q Consensus       210 V~~~~fs--p~g~~las~s~d~~i~iwd~~~-------~-------------~~~~~~~~h~~~V~~v~~s--~dg~~l~  265 (573)
                      |.-+...  -+...|+.|..||.|.+|..++       .             +|.+.+. -...++++++.  ...+.||
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEE
Confidence            4444443  3456889999999999997521       0             1222222 23467889988  7777888


Q ss_pred             EEeeCCeEEEEECCCC--ceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEEC
Q psy2671         266 SGCKNGVIHAWDSSTG--KQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDV  326 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~  326 (573)
                      +++....|.||-....  +........|...|.+++|.+......|. .+++++-.|.+.+|++
T Consensus       182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            8888888888765432  11111112355678899998876655554 6778899999998887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=84.21  E-value=3.4  Score=25.12  Aligned_cols=29  Identities=14%  Similarity=0.406  Sum_probs=19.4

Q ss_pred             cCCCEEEEEEccCCCEEEEee-CC--CcEEEc
Q psy2671         543 HGDEVYAVDWAPDGEKVASGG-KD--KVLRLW  571 (573)
Q Consensus       543 h~~~v~~~~~s~d~~~l~s~~-~d--~~i~iw  571 (573)
                      ....-....|||||++|+-++ .+  |.-.||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            344567889999999987544 44  666665

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>KOG2377|consensus

Probab=84.07  E-value=34  Score=33.95  Aligned_cols=120  Identities=15%  Similarity=0.205  Sum_probs=69.6

Q ss_pred             EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc---cccCCcccEEEEEecccccCCCCCEEEEEeCCCc
Q psy2671         244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ---PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA  320 (573)
Q Consensus       244 ~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~  320 (573)
                      .....+++|.++.||+|.+.||+--.+.+|.+.+.........   .-+.....|.+.+|...      ..+|-.+..| 
T Consensus        61 fdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s------~e~A~i~~~G-  133 (657)
T KOG2377|consen   61 FDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS------TEIAFITDQG-  133 (657)
T ss_pred             eeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC------eeEEEEecCC-
Confidence            3344566899999999999999999999999998733222111   11222345778888542      3344444333 


Q ss_pred             EEEEECCC-CeEEEEecCCCccEEEEEECCCc-E-EEEEe-CCCeEEEEeCCCC
Q psy2671         321 IRIWDVIL-SQCVRVLTSHTRSVTCIRWGGSG-L-IYSAS-QDRTIKVWRASDG  370 (573)
Q Consensus       321 v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~-~-l~s~s-~d~~i~vw~~~~~  370 (573)
                      +-+|.... .+.++....|.-.|.--.|.++. . +++.+ ..+++.=+.++++
T Consensus       134 ~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~  187 (657)
T KOG2377|consen  134 IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG  187 (657)
T ss_pred             eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence            44444322 23345556677777777776654 2 22222 4445444444443

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=83.96  E-value=12  Score=40.42  Aligned_cols=25  Identities=24%  Similarity=0.291  Sum_probs=20.2

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEE
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRF  233 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~i  233 (573)
                      .|..+.+||+|++||..|..|.+.+
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~v~V~  110 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRGVVVL  110 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEE
Confidence            5888999999999998887665444

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=83.93  E-value=16  Score=36.71  Aligned_cols=52  Identities=21%  Similarity=0.470  Sum_probs=43.1

Q ss_pred             CCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         513 DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       513 dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      .+.++|.||.-|-||+||--.......+++-.+.|..++.+.+|+++++...
T Consensus       572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk  623 (776)
T COG5167         572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK  623 (776)
T ss_pred             cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec
Confidence            4559999999999999997665556678888899999999999999765543

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=83.39  E-value=30  Score=30.74  Aligned_cols=103  Identities=13%  Similarity=0.232  Sum_probs=59.7

Q ss_pred             cEEEEEeCCCeEEEEcCCCCcc-ceeeeccccccEEEEEECCCCCEEEEeeCC---C---cEEEE---eCC--CCeEEE-
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKK-SLARMTGHQQLINCVEFSPDGRIIASASFD---K---SIKLW---DGR--IGKFIT-  496 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g~~las~s~d---g---~i~lw---d~~--~~~~~~-  496 (573)
                      +.|..+...+.|.+|++..... .+.++. --+.|..+.++..|.+|++--.+   .   .+|+|   ...  ..+.+. 
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v  107 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV  107 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence            5565557778899999884332 233333 23678999999999999985322   2   56765   211  111111 


Q ss_pred             eecCC---------------------cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         497 TLRGH---------------------VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       497 ~~~~h---------------------~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      .+-||                     .....+++..|-..-|+.|+ ++++.+|.+...
T Consensus       108 RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~  165 (215)
T PF14761_consen  108 RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQ  165 (215)
T ss_pred             EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEE
Confidence            11121                     12345666666433444554 567999987654

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=83.13  E-value=32  Score=34.93  Aligned_cols=101  Identities=15%  Similarity=0.222  Sum_probs=58.9

Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--EEEeec-----CCcceEEEEEECCCC------CEEEEEe--------
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLR-----GHVQAVYMVAWSSDS------RLLVSGS--------  521 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~--~~~~~~-----~h~~~v~~v~~s~dg------~~las~s--------  521 (573)
                      -..|+|.|||++|++--..|.|++++...+.  .+..+.     ........|+++|+-      ++|...-        
T Consensus        32 Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~~  111 (454)
T TIGR03606        32 PWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDKE  111 (454)
T ss_pred             ceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCCC
Confidence            5789999999888766556999999865543  222221     124668899999884      2344331        


Q ss_pred             --CCCcEEEEeCCcc--c------cccccc---CcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         522 --ADSTLKVWNMKTK--K------IEQDLP---GHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       522 --~D~~v~vwd~~~~--~------~~~~l~---~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                        ....|.-|.+...  .      ++..++   .|.+  ..|.|.|||+..++.|..
T Consensus       112 ~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~G--grI~FgPDG~LYVs~GD~  166 (454)
T TIGR03606       112 LPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNG--GRLVFGPDGKIYYTIGEQ  166 (454)
T ss_pred             ccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCC--ceEEECCCCcEEEEECCC
Confidence              1223444544321  1      112221   2433  367899999877766544

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=82.93  E-value=11  Score=37.33  Aligned_cols=99  Identities=18%  Similarity=0.244  Sum_probs=55.8

Q ss_pred             EEEEEECCCCCEEEEee-----------CCC-cEEEEeCCC--Ce--EEEeecCCcceEEEEEECCCCCEEEEEeCCCcE
Q psy2671         463 INCVEFSPDGRIIASAS-----------FDK-SIKLWDGRI--GK--FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL  526 (573)
Q Consensus       463 v~~v~~sp~g~~las~s-----------~dg-~i~lwd~~~--~~--~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v  526 (573)
                      ...|+|.++|+++++-.           ..+ .|.+++-..  |+  ....+.........+++.++| +++ ++.....
T Consensus        16 P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~i~   93 (367)
T TIGR02604        16 PIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPDIL   93 (367)
T ss_pred             CceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCeEE
Confidence            45789999999877643           223 677775432  22  223333223345778899998 444 4444433


Q ss_pred             EEEeCCcc-----c---ccccccC----cCCCEEEEEEccCCCEEEEee
Q psy2671         527 KVWNMKTK-----K---IEQDLPG----HGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       527 ~vwd~~~~-----~---~~~~l~~----h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ++.+....     +   ++..+..    +......+.|.|||+..++-+
T Consensus        94 ~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        94 FLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            34454321     1   1122322    123477899999998777655

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=82.40  E-value=56  Score=32.65  Aligned_cols=148  Identities=11%  Similarity=0.143  Sum_probs=79.3

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce-----
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ-----  283 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~-----  283 (573)
                      ....+..+++|.+++.+.....++-||--...-..........+.++.|.+++..++++ .+|.+. |....++.     
T Consensus       240 sf~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~-~S~d~G~~~~~~~  317 (398)
T PLN00033        240 TFSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLY-VSKGTGLTEEDFD  317 (398)
T ss_pred             ceeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEE-EecCCCCcccccc
Confidence            34556678888877777655444445532110011112234458899999998866654 556543 33334421     


Q ss_pred             eccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEEe--cCCCccEEEEEECCCcEEEEEeCC
Q psy2671         284 IGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL--TSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       284 ~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~--~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      .... .......+.++.|.+     + +.+..+|..|.+....- .++. .+.-  ..-......+.|.+++..+..+.+
T Consensus       318 f~~~~~~~~~~~l~~v~~~~-----d-~~~~a~G~~G~v~~s~D-~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~  390 (398)
T PLN00033        318 FEEADIKSRGFGILDVGYRS-----K-KEAWAAGGSGILLRSTD-GGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGND  390 (398)
T ss_pred             eeecccCCCCcceEEEEEcC-----C-CcEEEEECCCcEEEeCC-CCcceeEccccCCCCcceeEEEEcCCCceEEEeCC
Confidence            1110 011112356666543     2 34666777887766532 2222 1111  122346778888887878888888


Q ss_pred             CeEEEE
Q psy2671         360 RTIKVW  365 (573)
Q Consensus       360 ~~i~vw  365 (573)
                      |.|.-|
T Consensus       391 G~il~~  396 (398)
T PLN00033        391 GVLLRY  396 (398)
T ss_pred             cEEEEe
Confidence            877654

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=82.40  E-value=34  Score=30.17  Aligned_cols=68  Identities=22%  Similarity=0.236  Sum_probs=35.0

Q ss_pred             CCCeEEEEeC--CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCCCceec
Q psy2671         218 NGRSLASGSG--DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       218 ~g~~las~s~--d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~~~~~~  285 (573)
                      +|.++.+.+.  ...|+.||+.+++.+....-....+..=-...-|+++.. .-.+|....+|.++-+.+.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg  125 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELG  125 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhc
Confidence            3455566553  457999999988776543211111110000111233322 2346777788877665543

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=82.37  E-value=19  Score=36.90  Aligned_cols=112  Identities=12%  Similarity=0.302  Sum_probs=67.5

Q ss_pred             ccEEEEEECCCC----CEEEEeeCCCcEEEEeCC-----CCeEEEeecCCcc---eE--EEEEECCCCCEEEEEeCCCcE
Q psy2671         461 QLINCVEFSPDG----RIIASASFDKSIKLWDGR-----IGKFITTLRGHVQ---AV--YMVAWSSDSRLLVSGSADSTL  526 (573)
Q Consensus       461 ~~v~~v~~sp~g----~~las~s~dg~i~lwd~~-----~~~~~~~~~~h~~---~v--~~v~~s~dg~~las~s~D~~v  526 (573)
                      +-|..+.|.|-+    -.|++-.....|.+|.+.     ..+.+..-..+.+   +|  -.+.|+|....|++-.....=
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS  136 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS  136 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence            458899999853    234444557889999764     2232222111111   11  235699999888876655444


Q ss_pred             EEEeCCc--ccccccccCcCCCEEEEEEccCCCEEEEeeCC-CcEEEccC
Q psy2671         527 KVWNMKT--KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD-KVLRLWQN  573 (573)
Q Consensus       527 ~vwd~~~--~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d-~~i~iw~~  573 (573)
                      -++++..  ......+.+ .+.|.|..|.+||+.|+.+-.. =.-++|+.
T Consensus       137 V~~sV~~d~srVkaDi~~-~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~  185 (671)
T PF15390_consen  137 VLPSVHCDSSRVKADIKT-SGLIHCACWTKDGQRLVVAVGSSLHSYIWDS  185 (671)
T ss_pred             EeeeeeeCCceEEEeccC-CceEEEEEecCcCCEEEEEeCCeEEEEEecC
Confidence            5555533  233344543 5789999999999998765333 34678863

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=82.29  E-value=6.4  Score=23.89  Aligned_cols=28  Identities=25%  Similarity=0.319  Sum_probs=18.2

Q ss_pred             cccEEEEEECCCCCEEEEee-CC--CcEEEE
Q psy2671         460 QQLINCVEFSPDGRIIASAS-FD--KSIKLW  487 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~s-~d--g~i~lw  487 (573)
                      ...-....|||||+.|+-.+ .+  |.-.||
T Consensus         8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            34456789999999887554 44  555555

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PRK10115 protease 2; Provisional

Probab=81.84  E-value=84  Score=34.24  Aligned_cols=149  Identities=11%  Similarity=0.035  Sum_probs=71.3

Q ss_pred             EEEEEcCCCCeEEEEeCC------CeEEEEECCCC--eeeEEecCCCCcEE-EEEEcCCCCeEEEEee---CCeEEEEEC
Q psy2671         211 ISVKFSPNGRSLASGSGD------TTVRFWDVTTQ--TPLFKCEGHKHWVL-CIAWSPDSKQLVSGCK---NGVIHAWDS  278 (573)
Q Consensus       211 ~~~~fsp~g~~las~s~d------~~i~iwd~~~~--~~~~~~~~h~~~V~-~v~~s~dg~~l~sgs~---dg~i~vwd~  278 (573)
                      ..++|++|++.|+-...+      ..|..+++.++  +....+........ .+..+.|+++++..+.   ++.+.+++.
T Consensus       175 ~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~  254 (686)
T PRK10115        175 PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA  254 (686)
T ss_pred             eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence            358899999877665432      36777888876  22222222222222 3334558887765444   356888885


Q ss_pred             C--CCceecccccCCcccEEEEEecccccCCCCCEEEEEeC-CCcEEEE--ECC-CCeEEEEecCC-C-ccEEEEEECCC
Q psy2671         279 S--TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-DGAIRIW--DVI-LSQCVRVLTSH-T-RSVTCIRWGGS  350 (573)
Q Consensus       279 ~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-dg~v~iw--d~~-~~~~~~~~~~h-~-~~v~~~~~~~~  350 (573)
                      .  .+... ..+.........+    .+.  ....++.... ....++.  ++. .++. ..+..+ . ..+..+.+..+
T Consensus       255 ~~~~~~~~-~~~~~~~~~~~~~----~~~--~~~ly~~tn~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~~i~~~~~~~~  326 (686)
T PRK10115        255 ELADAEPF-VFLPRRKDHEYSL----DHY--QHRFYLRSNRHGKNFGLYRTRVRDEQQW-EELIPPRENIMLEGFTLFTD  326 (686)
T ss_pred             cCCCCCce-EEEECCCCCEEEE----EeC--CCEEEEEEcCCCCCceEEEecCCCcccC-eEEECCCCCCEEEEEEEECC
Confidence            3  23211 0111011111111    111  1122222211 1223333  333 1222 223333 3 36777888777


Q ss_pred             cEEEEEeCCCeEEEEeC
Q psy2671         351 GLIYSASQDRTIKVWRA  367 (573)
Q Consensus       351 ~~l~s~s~d~~i~vw~~  367 (573)
                      ..+++...++.-+++-+
T Consensus       327 ~l~~~~~~~g~~~l~~~  343 (686)
T PRK10115        327 WLVVEERQRGLTSLRQI  343 (686)
T ss_pred             EEEEEEEeCCEEEEEEE
Confidence            77777777877666644

>KOG2247|consensus

Probab=81.03  E-value=0.17  Score=49.60  Aligned_cols=133  Identities=18%  Similarity=0.265  Sum_probs=88.0

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCeEEEeec--C-Cc
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRIGKFITTLR--G-HV  502 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~~~~~~~~~--~-h~  502 (573)
                      +.+.-++.++.+..+..||-......  ... .+.....++++.+|..++ .+-..+.+.+||+.+.. .+++.  + |.
T Consensus        44 ~e~~nlavaca~tiv~~YD~agq~~l--e~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~ey-tqqLE~gg~~s  119 (615)
T KOG2247|consen   44 PEGHNLAVACANTIVIYYDKAGQVIL--ELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY-TQQLESGGTSS  119 (615)
T ss_pred             cCCCceehhhhhhHHHhhhhhcceec--ccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhh-HHHHhccCcch
Confidence            45555788888888888874432111  111 122234567777776544 45677899999987532 12221  1 22


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      ..  -+.|++-+..++.+-..+.+.||+..+.+.......|..++++++|.+.+. .+.++.|.
T Consensus       120 ~s--ll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~  180 (615)
T KOG2247|consen  120 KS--LLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDN  180 (615)
T ss_pred             HH--HHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHH
Confidence            22  268999999999998999999999988776666655999999999999864 45555554

>KOG3630|consensus

Probab=81.01  E-value=4.1  Score=44.71  Aligned_cols=108  Identities=15%  Similarity=0.079  Sum_probs=66.9

Q ss_pred             EEEEEECCCCCEEEE--eeCCCcEEEEeCCCCeEE-----EeecCC------cceEEEEEECCCCC-EEEEEeCCCcEEE
Q psy2671         463 INCVEFSPDGRIIAS--ASFDKSIKLWDGRIGKFI-----TTLRGH------VQAVYMVAWSSDSR-LLVSGSADSTLKV  528 (573)
Q Consensus       463 v~~v~~sp~g~~las--~s~dg~i~lwd~~~~~~~-----~~~~~h------~~~v~~v~~s~dg~-~las~s~D~~v~v  528 (573)
                      +..+...+|+...++  .+.+-.|..||+++...-     .-|..|      .....++.|.|.=. ..|....|+.|++
T Consensus       103 i~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V  182 (1405)
T KOG3630|consen  103 IVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRV  182 (1405)
T ss_pred             ceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhh
Confidence            445555667665443  334447888998753211     112222      22345778887533 3556678888888


Q ss_pred             EeCCcccc-cccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         529 WNMKTKKI-EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       529 wd~~~~~~-~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      ..+..... +..+ .-...++++.|+|.|++++.|-..|++.=|
T Consensus       183 ~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy  225 (1405)
T KOG3630|consen  183 KSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQY  225 (1405)
T ss_pred             hhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEe
Confidence            87654332 2222 235578999999999999999988887543

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=80.68  E-value=22  Score=38.03  Aligned_cols=109  Identities=14%  Similarity=0.157  Sum_probs=71.4

Q ss_pred             EEEEEECC--CCCEEEEeeCCCcEEEEeCCC-------C----e---------EEEeecCCcceEEEEEEC--CCCCEEE
Q psy2671         463 INCVEFSP--DGRIIASASFDKSIKLWDGRI-------G----K---------FITTLRGHVQAVYMVAWS--SDSRLLV  518 (573)
Q Consensus       463 v~~v~~sp--~g~~las~s~dg~i~lwd~~~-------~----~---------~~~~~~~h~~~v~~v~~s--~dg~~la  518 (573)
                      |+.+....  +...|+.+..||.|.+|..++       .    +         +...++- ...++.++++  ...++||
T Consensus       103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v-~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRV-GASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeec-CCceeEEEEEecCcceEEE
Confidence            55555443  456888999999999996421       0    0         1111221 2367899998  7888999


Q ss_pred             EEeCCCcEEEEeCCcc--ccc-ccccCcCCCEEEEEEccCC---C---EEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTK--KIE-QDLPGHGDEVYAVDWAPDG---E---KVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~--~~~-~~l~~h~~~v~~~~~s~d~---~---~l~s~~~d~~i~iw~  572 (573)
                      +++....|.||-....  +.. ..-..|...|-+|.|-++.   .   ++++++-.|.+.+|+
T Consensus       182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~  244 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFK  244 (717)
T ss_pred             EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEE
Confidence            9988888988876432  111 1111245578899998764   2   788899999887764

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	573
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		5e-55
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		4e-40
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		7e-22
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		9e-30
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		4e-28
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-21
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		9e-30
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		8e-28
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		2e-21
2h9l_A	329	Wdr5delta23 Length = 329		9e-30
2h9l_A	329	Wdr5delta23 Length = 329		8e-28
2h9l_A	329	Wdr5delta23 Length = 329		2e-21
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		1e-29
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		9e-28
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-21
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-29
2g99_A	308	Structural Basis For The Specific Recognition Of Me		9e-28
2g99_A	308	Structural Basis For The Specific Recognition Of Me		2e-21
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-29
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		9e-28
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		2e-21
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-29
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-27
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		2e-21
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-29
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		7e-28
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		2e-21
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-29
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-27
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		2e-21
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-29
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-27
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		2e-21
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		1e-29
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		1e-28
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-29
2gnq_A	336	Structure Of Wdr5 Length = 336		5e-28
2gnq_A	336	Structure Of Wdr5 Length = 336		2e-21
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-29
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		9e-28
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		2e-21
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-29
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		4e-27
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		5e-29
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-28
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		5e-29
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		7e-27
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		8e-29
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		1e-26
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-26
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-18
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		5e-17
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		6e-11
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-26
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-18
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		6e-17
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		7e-11
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		2e-26
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		3e-16
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		3e-25
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		9e-23
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		6e-14
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		8e-11
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		3e-05
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		5e-22
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		5e-06
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		8e-20
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		1e-19
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-12
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-18
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		4e-09
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		2e-08
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-18
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		6e-14
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-18
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		6e-14
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-18
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		6e-14
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		3e-18
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		4e-09
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		3e-08
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		4e-18
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		1e-13
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		5e-18
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		1e-13
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		3e-17
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		8e-17
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		3e-07
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		2e-04
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		1e-16
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-16
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-16
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-16
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		1e-16
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		2e-16
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		4e-16
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		5e-16
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		5e-16
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		2e-15
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		3e-13
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		2e-15
4aez_A	401	Crystal Structure Of Mitotic Checkpoint Complex Len		9e-10
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		9e-15
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		4e-04
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		9e-15
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		4e-04
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		1e-14
4gga_A	420	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-11
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		1e-14
4ggd_A	431	Structural Analysis Of Human Cdc20 Supports Multisi		2e-11
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-14
4ggc_A	318	Structural Analysis Of Human Cdc20 Supports Multi-S		2e-11
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		2e-14
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		2e-14
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-14
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		6e-14
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		5e-12
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		4e-13
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		1e-12
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		4e-11
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		1e-10
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		1e-10
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		2e-10
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		2e-07
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		2e-10
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		5e-10
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		8e-10
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		9e-10
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		7e-08
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		1e-07
1pi6_A	615	Yeast Actin Interacting Protein 1 (Aip1), Orthorhom		7e-06
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		1e-07
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		2e-07
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		4e-07
1pgu_A	615	Yeast Actin Interacting Protein 1 (aip1), Se-met Pr		7e-06
4gqb_B	344	Crystal Structure Of The Human Prmt5:mep50 Complex		5e-07
3bg0_A	316	Architecture Of A Coat For The Nuclear Pore Membran		7e-07
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		7e-07
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		4e-06
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		1e-06
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		5e-06
3jpx_A	402	Eed: A Novel Histone Trimethyllysine Binder Within		8e-06
3iiy_A	365	Crystal Structure Of Eed In Complex With A Trimethy		8e-06
3iiw_A	365	Crystal Structure Of Eed In Complex With A Trimethy		8e-06
3jzn_A	366	Structure Of Eed In Apo Form Length = 366		9e-06
2qxv_A	361	Structural Basis Of Ezh2 Recognition By Eed Length		9e-06
3mmy_A	368	Structural And Functional Analysis Of The Interacti		1e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		4e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		7e-04
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		4e-05
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		7e-04
3jro_A	753	Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice		2e-04
3jro_A	753	Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice		4e-04
3jrp_A	379	Sec13 With Nup145c (Aa109-179) Insertion Blade Leng		3e-04
3jrp_A	379	Sec13 With Nup145c (Aa109-179) Insertion Blade Leng		4e-04
2pm6_B	297	Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF		5e-04
2pm6_B	297	Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF		5e-04
2pm9_B	297	Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O		8e-04
2pm9_B	297	Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT O		8e-04

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  212 bits (539), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 249/472 (52%), Gaps = 34/472 (7%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITK 164
           ++ GH+ +V  V FSP+G+++AS S D TV+ W+   Q        +  +  V  +   +
Sbjct: 52  TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQ 111
Query: 165 TLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLAS 224
           T+A      + + ++ V +  +   + Q         ++ GH+ +V  V FSP+G+++AS
Sbjct: 112 TIA------SASDDKTVKLWNRNGQLLQ---------TLTGHSSSVWGVAFSPDGQTIAS 156
Query: 225 GSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
            S D TV+ W+   Q  L    GH   V  +A+SPD + + S   +  +  W+ +   Q+
Sbjct: 157 ASDDKTVKLWNRNGQL-LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN--GQL 213
Query: 285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC 344
            Q + GH   +  +++ P       +  AS+  D  +++W+    Q ++ LT H+ SV  
Sbjct: 214 LQTLTGHSSSVRGVAFSP-----DGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVNG 267
Query: 345 IRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG 403
           + +   G  I SAS D+T+K+W   +G + +TL GH+  V  +A S D      A+    
Sbjct: 268 VAFRPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 326
Query: 404 FKYDPANPEE---SSKHALAKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH 459
            K    N +     + H+ + +  A  P+G+ + S SDD T+ LWN  +  + L  +TGH
Sbjct: 327 VKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN--RNGQLLQTLTGH 384
Query: 460 QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVS 519
              +  V FSPDG+ IASAS DK++KLW+ R G+ + TL GH  +V+ VA+S D + + S
Sbjct: 385 SSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIAS 443
Query: 520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            S D T+K+WN +  ++ Q L GH   V  V ++PDG+ +AS   DK ++LW
Sbjct: 444 ASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 494

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  162 bits (411), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 179/333 (53%), Gaps = 18/333 (5%)
Query: 244 KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
           + E H   V  +A+SPD + + S   +  +  W+ +   Q+ Q + GH   +  +++ P 
Sbjct: 11  RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSP- 67
Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTI 362
                 +  AS+  D  +++W+    Q ++ LT H+ SV  + +   G  I SAS D+T+
Sbjct: 68  ----DGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP---EESSKHAL 419
           K+W   +G + +TL GH+  V  +A S D      A+     K    N    +  + H+ 
Sbjct: 123 KLWN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS 181
Query: 420 AKYQ-AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA 478
           + +  A  P+G+ + S SDD T+ LWN  +  + L  +TGH   +  V FSPDG+ IASA
Sbjct: 182 SVWGVAFSPDGQTIASASDDKTVKLWN--RNGQLLQTLTGHSSSVRGVAFSPDGQTIASA 239
Query: 479 SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
           S DK++KLW+ R G+ + TL GH  +V  VA+  D + + S S D T+K+WN +  ++ Q
Sbjct: 240 SDDKTVKLWN-RNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWN-RNGQLLQ 297
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            L GH   V+ V ++PDG+ +AS   DK ++LW
Sbjct: 298 TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 330

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score =  102 bits (253), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/121 (42%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW 510
           K   R+  H   +  V FSPDG+ IASAS DK++KLW+ R G+ + TL GH  +V+ VA+
Sbjct: 7   KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVAF 65
Query: 511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL 570
           S D + + S S D T+K+WN +  ++ Q L GH   V  V ++PDG+ +AS   DK ++L
Sbjct: 66  SPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKL 124
Query: 571 W 571
           W
Sbjct: 125 W 125

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 31  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 91  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 144
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 205 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 228
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 229 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 288 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 39  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 95
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
              +       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 96  ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 182
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 183 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 235
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 295
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 296 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 332

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 30  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 88
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 89  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 149 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 9   VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 68
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 69  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 122
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 123 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 183 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 206
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 207 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 266 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 17  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 75
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 76  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 130
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 131 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 160
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 161 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 274 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 8   PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 66
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 67  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 126
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 176

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 26  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 85
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 86  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 139
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 140 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 199
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 200 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 223
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 224 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 282
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 283 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 325

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 34  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 92
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 93  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 147
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 148 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 177
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 178 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 230
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 231 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 290
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 291 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 327

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 25  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 83
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 84  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 143
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 144 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 193

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 14  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 73
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 74  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 127
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 128 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 187
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 188 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 211
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 212 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 270
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 271 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 313

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  121 bits (304), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 22  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 80
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 81  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 135
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 136 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 165
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 166 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 218
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 219 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 278
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 279 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 315

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 13  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 71
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 72  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 131
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 132 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 181

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 5   VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 65  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 118
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 179 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 202
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 203 ILAATLDNTLKLWDYSKG-KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 262 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  121 bits (304), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 13  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 71
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 72  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 156
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 157 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 209
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 210 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 269
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 270 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 306

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 4   PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 62
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 63  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 122
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 123 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 172

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 10  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 69
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 70  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 123
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 124 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 183
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 184 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 207
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 208 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 266
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 267 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 309

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  121 bits (304), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 18  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 76
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 77  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 131
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 132 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 161
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 162 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 214
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 215 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 274
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 275 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 311

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 9   PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 67
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 68  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 127
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 128 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 177

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 9   VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 68
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 69  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 122
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 123 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 183 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 206
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 207 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 266 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 17  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 75
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 76  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 130
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 131 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 160
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 161 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 214 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 273
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 274 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 8   PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 66
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 67  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 126
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 127 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 176

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 15  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 74
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 75  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 128
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 189 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 212
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 213 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 272 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 314

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 23  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 79
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
              +       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 80  ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 136
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 137 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 166
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 167 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 219
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 220 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 279
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 280 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 316

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 14  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 72
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 73  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 132
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 182

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 8   VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 67
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 68  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 121
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 122 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 181
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 182 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 205
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 206 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 264
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 265 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 307

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 16  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 74
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 75  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 129
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 130 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 159
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 160 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 212
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 213 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 272
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 273 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 309

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 7   PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 65
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 66  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 125
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 126 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 175

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 15  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 74
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 75  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 128
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 189 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 212
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 213 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 272 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 314

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 23  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 81
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 82  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 136
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 137 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 166
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 167 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 219
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 220 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 279
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 280 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 316

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 14  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 72
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 73  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 132
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 182

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 12  VKPNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 125
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV    C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 126 VSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 186 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 209
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 210 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 269 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 311

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 49/338 (14%)
Query: 242 LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
           +F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W 
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWS 77
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDR 360
                       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D 
Sbjct: 78  S-----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
           ++++W    G+  +TL  H+  V+ +  + D                             
Sbjct: 133 SVRIWDVKTGMCLKTLPAHSDPVSAVHFNRD----------------------------- 163
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
                   G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ 
Sbjct: 164 --------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 215
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIE 537
           D ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I 
Sbjct: 216 DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIV 275
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
           Q L GH D V +    P    +AS     DK ++LW++
Sbjct: 276 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 313

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 33  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 92
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 93  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 146
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 147 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 206
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 207 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 230
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 231 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 289
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 290 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 332

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  122 bits (306), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 41  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 97
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
              +       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 98  ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 154
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 155 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 184
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 185 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 237
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 238 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 297
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 298 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 334

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 32  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 90
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 91  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 150
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 151 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 200

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 15  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 74
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 75  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 128
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 129 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 188
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 189 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 212
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 213 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 272 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 314

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  121 bits (304), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 23  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAW-- 79
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
              +       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 80  ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 136
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 137 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 166
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 167 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 219
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 220 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 279
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 280 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 316

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 7/170 (4%)
Query: 408 PANPEESSKHALAKYQAQC------PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           P  P  + K  LA +          P GE L S S D  + +W    + K    ++GH+ 
Sbjct: 14  PVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKL 72
Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            I+ V +S D  ++ SAS DK++K+WD   GK + TL+GH   V+   ++  S L+VSGS
Sbjct: 73  GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 132
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            D ++++W++KT K  + LP H D V AV +  DG  + S   D + R+W
Sbjct: 133 FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 182

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score =  127 bits (318), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LA+ S D  ++ W            GHK  +
Sbjct: 12  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 125
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 186 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 209
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 210 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 269 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 311

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L +   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 78
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 79  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 133
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 134 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 163
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 164 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 216
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 217 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 276
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++LW++
Sbjct: 277 KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 313

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 152/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 12  VKPNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 125
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV    C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 126 VSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 186 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 209
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D  L LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 210 ILAATLDNDLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K+W
Sbjct: 269 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 311

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 150/338 (44%), Gaps = 49/338 (14%)
Query: 242 LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE 301
           +F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W 
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWS 77
Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDR 360
                       S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D 
Sbjct: 78  S-----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 132
Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
           ++++W    G+  +TL  H+  V+ +  + D                             
Sbjct: 133 SVRIWDVKTGMCLKTLPAHSDPVSAVHFNRD----------------------------- 163
Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
                   G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ 
Sbjct: 164 --------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL 215
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIE 537
           D  +KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I 
Sbjct: 216 DNDLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQTKEIV 275
Query: 538 QDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
           Q L GH D V +    P    +AS     DK ++LW++
Sbjct: 276 QKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 313

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 12  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 125
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 186 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 209
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 210 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K++
Sbjct: 269 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLY 311

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 78
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 79  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 133
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 134 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 163
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 164 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 216
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 217 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 276
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++L+++
Sbjct: 277 KLQGHTDVVISTACHPTENIIASAALENDKTIKLYKS 313

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score =  125 bits (313), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWV 252
           V+P      ++ GH +AV SVKFSPNG  LAS S D  ++ W            GHK  +
Sbjct: 12  VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 71
Query: 253 LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF 312
             +AWS DS  LVS   +  +  WD S+GK + + ++GH  ++   ++ P     Q    
Sbjct: 72  SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLI 125
Query: 313 ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGV 371
            S   D ++RIWDV   +C++ L +H+  V+ + +   G LI S+S D   ++W  + G 
Sbjct: 126 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
             +TL                              D  NP  S      K+    P G+ 
Sbjct: 186 CLKTL-----------------------------IDDDNPPVS----FVKFS---PNGKY 209
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV--EFS-PDGRIIASASFDKSIKLWD 488
           +++ + D TL LW+  K  K L   TGH+    C+   FS   G+ I S S D  + +W+
Sbjct: 210 ILAATLDNTLKLWDYSK-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVW 529
            +  + +  L+GH   V   A      ++ S +   D T+K++
Sbjct: 269 LQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLF 311

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 149/337 (44%), Gaps = 49/337 (14%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           F   GH   V  + +SP+ + L S   + +I  W +  GK   + + GHK  I+ ++W  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKLGISDVAWSS 78
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRT 361
                      S+  D  ++IWDV   +C++ L  H+  V C  +   S LI S S D +
Sbjct: 79  -----DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 133
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +++W    G   +TL  H+  V+ +  + D                              
Sbjct: 134 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRD------------------------------ 163
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD 481
                  G  +VS S D    +W+    +     +      ++ V+FSP+G+ I +A+ D
Sbjct: 164 -------GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 216
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNMKTKKIEQ 538
            ++KLWD   GK + T  GH    Y +  +   +  + +VSGS D+ + +WN++TK+I Q
Sbjct: 217 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 276
Query: 539 DLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQN 573
            L GH D V +    P    +AS     DK ++L+++
Sbjct: 277 KLQGHTDVVISTACHPTENIIASAALENDKTIKLFKS 313

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 212/493 (43%), Gaps = 60/493 (12%)
Query: 106  MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
            +  H + V+   FS +   +A+ S D  V+ WD  T   +   +   +   VN    T  
Sbjct: 653  IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD--EHSEQVNCCHFTNK 710
Query: 166  LADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
             ++ L L T + +  + +  + QK+          C ++M GH  +V   +FSP+   LA
Sbjct: 711  -SNHLLLATGSNDFFLKLWDLNQKE----------CRNTMFGHTNSVNHCRFSPDDELLA 759
Query: 224  SGSGDTTVRFWDVTTQTPLFKCEGHKHW-------------VLCIAWSPDSKQLVSGCKN 270
            S S D T+R WDV +          + +             V C +WS D  +++   KN
Sbjct: 760  SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819
Query: 271  GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-HLNHQCRRFASSGKDGAIRIWDVILS 329
             V+  +D  T   + +   GH   I    + P+ HL         +     + +W++   
Sbjct: 820  KVL-LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA------VIALSQYCVELWNIDSR 872
Query: 330  QCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVW------RASDGVMCRTLEGHAHW 382
              V     H   V  + +   G  + +AS D+TI+VW      + S  V+ + ++     
Sbjct: 873  LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932
Query: 383  VNTLALSTDYL--MRVEATSTGGFKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDD 438
              T+ L+ D +  +++ A  TG   Y P           A+    C  P  E +  G +D
Sbjct: 933  NETMVLAVDNIRGLQLIAGKTGQIDYLPE----------AQVSCCCLSPHLEYVAFGDED 982
Query: 439  FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
              + +       +  +   GH++ +  ++F+ DG+ + S+S D  I++W+ + G ++  L
Sbjct: 983  GAIKIIEL-PNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FL 1040
Query: 499  RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
            + H + V       DSRLL S S D T+KVWN+ T +IE+D   H   V +   + D  K
Sbjct: 1041 QAHQETVKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATK 1099
Query: 559  VASGGKDKVLRLW 571
             +S   DK  ++W
Sbjct: 1100 FSSTSADKTAKIW 1112

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 146/336 (43%), Gaps = 40/336 (11%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
           H +AV    FS +G+ +AS   D T++ +   T   L   + H+  VLC A+S D   + 
Sbjct: 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 673
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW--EPFHLNHQCRRFASSGKDGAIRI 323
           +   +  +  WDS+TGK +      H + +    +  +  HL       A+   D  +++
Sbjct: 674 TCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTNKSNHL-----LLATGSNDFFLKL 727
Query: 324 WDVILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
           WD+   +C   +  HT SV   R+     L+ S S D T+++W        +++      
Sbjct: 728 WDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN----- 782
Query: 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF 442
           V    LS++               DP  PE+     + K  +   +G+K++  + +  L 
Sbjct: 783 VKRFFLSSE---------------DP--PEDVE--VIVKCCSWSADGDKIIVAAKNKVL- 822
Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRG 500
           L++           TGH   I   +FSP   +   A     ++LW  D R+   +   RG
Sbjct: 823 LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK--VADCRG 880
Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
           H+  V+ V +S D    ++ S D T++VW  +TKK+
Sbjct: 881 HLSWVHGVMFSPDGSSFLTASDDQTIRVW--ETKKV 914

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 22/284 (7%)
Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS 368
           +R AS G D  ++++     + +  + +H   V C  +      I + S D+ +K+W ++
Sbjct: 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687
Query: 369 DGVMCRTLEGHAHWVNTLALS--TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA-- 424
            G +  T + H+  VN    +  +++L+    ++    K    N +E          +  
Sbjct: 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVN 747
Query: 425 QC---PEGEKLVSGSDDFTLFLWN----PEKEKKSLARMTGHQQ--------LINCVEFS 469
            C   P+ E L S S D TL LW+     E++  ++ R     +        ++ C  +S
Sbjct: 748 HCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKV 528
            DG  I  A+ +K + L+D      +  +  GH   +    +S    L V   +   +++
Sbjct: 808 ADGDKIIVAAKNK-VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVEL 866
Query: 529 WNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           WN+ ++    D  GH   V+ V ++PDG    +   D+ +R+W+
Sbjct: 867 WNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
           PE S  +  AK QA+  EG       D   L+L W  +K  K+L+R+    H   +    
Sbjct: 571 PETSEVYRQAKLQAK-QEG-------DTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHAC 622
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
           FS DG+ IAS   DK+++++    G+ +  ++ H   V   A+SSD   + + SAD  +K
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVK 682
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASGGKDKVLRLW 571
           +W+  T K+      H ++V    +        +A+G  D  L+LW
Sbjct: 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 212/493 (43%), Gaps = 60/493 (12%)
Query: 106  MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKT 165
            +  H + V+   FS +   +A+ S D  V+ WD  T   +   +   +   VN    T  
Sbjct: 660  IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD--EHSEQVNCCHFTNK 717
Query: 166  LADVLPLDTLNTEEVVDI--VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
             ++ L L T + +  + +  + QK+          C ++M GH  +V   +FSP+   LA
Sbjct: 718  -SNHLLLATGSNDFFLKLWDLNQKE----------CRNTMFGHTNSVNHCRFSPDDELLA 766
Query: 224  SGSGDTTVRFWDVTTQTPLFKCEGHKHW-------------VLCIAWSPDSKQLVSGCKN 270
            S S D T+R WDV +          + +             V C +WS D  +++   KN
Sbjct: 767  SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 826
Query: 271  GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF-HLNHQCRRFASSGKDGAIRIWDVILS 329
             V+  +D  T   + +   GH   I    + P+ HL         +     + +W++   
Sbjct: 827  KVL-LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLA------VIALSQYCVELWNIDSR 879
Query: 330  QCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVW------RASDGVMCRTLEGHAHW 382
              V     H   V  + +   G  + +AS D+TI+VW      + S  V+ + ++     
Sbjct: 880  LKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 939
Query: 383  VNTLALSTDYL--MRVEATSTGGFKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDD 438
              T+ L+ D +  +++ A  TG   Y P           A+    C  P  E +  G +D
Sbjct: 940  NETMVLAVDNIRGLQLIAGKTGQIDYLPE----------AQVSCCCLSPHLEYVAFGDED 989
Query: 439  FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
              + +       +  +   GH++ +  ++F+ DG+ + S+S D  I++W+ + G ++  L
Sbjct: 990  GAIKIIELPN-NRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FL 1047
Query: 499  RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK 558
            + H + V       DSRLL S S D T+KVWN+ T +IE+D   H   V +   + D  K
Sbjct: 1048 QAHQETVKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATK 1106
Query: 559  VASGGKDKVLRLW 571
             +S   DK  ++W
Sbjct: 1107 FSSTSADKTAKIW 1119

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 145/334 (43%), Gaps = 36/334 (10%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
           H +AV    FS +G+ +AS   D T++ +   T   L   + H+  VLC A+S D   + 
Sbjct: 621 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIA 680
Query: 266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD 325
           +   +  +  WDS+TGK +      H + +    +     NH     A+   D  +++WD
Sbjct: 681 TCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTN-KSNH--LLLATGSNDFFLKLWD 736
Query: 326 VILSQCVRVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
           +   +C   +  HT SV   R+     L+ S S D T+++W        +++      V 
Sbjct: 737 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN-----VK 791
Query: 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW 444
              LS++               DP  PE+     + K  +   +G+K++  + +  L L+
Sbjct: 792 RFFLSSE---------------DP--PEDVE--VIVKCCSWSADGDKIIVAAKNKVL-LF 831
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHV 502
           +           TGH   I   +FSP   +   A     ++LW  D R+   +   RGH+
Sbjct: 832 DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLK--VADCRGHL 889
Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI 536
             V+ V +S D    ++ S D T++VW  +TKK+
Sbjct: 890 SWVHGVMFSPDGSSFLTASDDQTIRVW--ETKKV 921

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 123/284 (43%), Gaps = 22/284 (7%)
Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQDRTIKVWRAS 368
           +R AS G D  ++++     + +  + +H   V C  +      I + S D+ +K+W ++
Sbjct: 635 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 694
Query: 369 DGVMCRTLEGHAHWVNTLALS--TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA-- 424
            G +  T + H+  VN    +  +++L+    ++    K    N +E          +  
Sbjct: 695 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVN 754
Query: 425 QC---PEGEKLVSGSDDFTLFLWN----PEKEKKSLARMTGHQQ--------LINCVEFS 469
            C   P+ E L S S D TL LW+     E++  ++ R     +        ++ C  +S
Sbjct: 755 HCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 814
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSRLLVSGSADSTLKV 528
            DG  I  A+ +K + L+D      +  +  GH   +    +S    L V   +   +++
Sbjct: 815 ADGDKIIVAAKNK-VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVEL 873
Query: 529 WNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           WN+ ++    D  GH   V+ V ++PDG    +   D+ +R+W+
Sbjct: 874 WNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 917

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL-WNPEKEKKSLARMT--GHQQLINCVE 467
           PE S  +  AK QA+  EG       D   L+L W  +K  K+L+R+    H   +    
Sbjct: 578 PETSEVYRQAKLQAK-QEG-------DTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHAC 629
Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK 527
           FS DG+ IAS   DK+++++    G+ +  ++ H   V   A+SSD   + + SAD  +K
Sbjct: 630 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVK 689
Query: 528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASGGKDKVLRLW 571
           +W+  T K+      H ++V    +        +A+G  D  L+LW
Sbjct: 690 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 735

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 150/351 (42%), Gaps = 65/351 (18%)
Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEP 302
           +   GH+  V  + + P    +VS  ++  I  WD  TG    + ++GH   +  +S   
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDIS--- 157
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRT 361
              +H  +  AS   D  I++WD    +C+R +  H  +V+ +    +G  I SAS+D+T
Sbjct: 158 --FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKT 215
Query: 362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           IK+W    G   +T  GH  WV  +  + D                              
Sbjct: 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQD------------------------------ 245
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD---------- 471
                  G  + S S+D T+ +W     K+  A +  H+ ++ C+ ++P+          
Sbjct: 246 -------GTLIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEAT 297
Query: 472 ----------GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
                     G  + S S DK+IK+WD   G  + TL GH   V  V + S  + ++S +
Sbjct: 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCA 357
Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
            D TL+VW+ K K+  + L  H   V ++D+      V +G  D+ +++W+
Sbjct: 358 DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
           W P   +K    ++GH+  +  V F P   ++ SAS D +IK+WD   G F  TL+GH  
Sbjct: 94  WIPRPPEKYA--LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 151
Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG 563
           +V  +++    +LL S SAD T+K+W+ +  +  + + GH   V +V   P+G+ + S  
Sbjct: 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 211
Query: 564 KDKVLRLWQ 572
           +DK +++W+
Sbjct: 212 RDKTIKMWE 220

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GLIYSASQDRTIKVWRA 367
           R  S   D  +++W  +  +C+R L  HT  V    W       +I S S DRT+KVW A
Sbjct: 131 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQMRDNIIISGSTDRTLKVWNA 186
Query: 368 SDGVMCRTLEGHAHWVNTLAL--------STDYLMRVEATSTGGFKYDPANPEESSKHAL 419
             G    TL GH   V  + L        S D  +RV    TG              H L
Sbjct: 187 ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG-----------QCLHVL 235
Query: 420 AKYQA--QCPE--GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
             + A  +C +  G ++VSG+ DF + +W+PE E   L  + GH   +  ++F  DG  +
Sbjct: 236 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHV 292
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S S D SI++WD   G  I TL GH      +    +  +LVSG+ADST+K+W++KT +
Sbjct: 293 VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQ 350
Query: 536 IEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
             Q L G      AV      +  V +   D  ++LW
Sbjct: 351 CLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 387

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 128/271 (47%), Gaps = 48/271 (17%)
Query: 303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI 362
           + L +  ++  S  +D  I+IWD    +C R+LT HT SV C+++    +I + S D T+
Sbjct: 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTV 195
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422
           +VW  + G M  TL  H   V  L  +                                 
Sbjct: 196 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGM------------------------------ 225
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR--MTGHQQLINCVEFSPDGRIIASASF 480
                    +V+ S D ++ +W+         R  + GH+  +N V+F  D + I SAS 
Sbjct: 226 ---------MVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274
Query: 481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
           D++IK+W+    +F+ TL GH + +  + +    RL+VSGS+D+T+++W+++     + L
Sbjct: 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVL 332
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            GH + V  + +  D +++ SG  D  +++W
Sbjct: 333 EGHEELVRCIRF--DNKRIVSGAYDGKIKVW 361

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA 522
           + C+++  D + I S   D +IK+WD    +    L GH  +V  + +  D R++++GS+
Sbjct: 136 VYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS 191
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           DST++VW++ T ++   L  H + V  + +  +   + +  KD+ + +W
Sbjct: 192 DSTVRVWDVNTGEMLNTLIHHCEAVLHLRF--NNGMMVTCSKDRSIAVW 238

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 117/250 (46%), Gaps = 52/250 (20%)
Query: 335 LTSHTRSVTCIR--WGGSGLIYSASQDRTIKVWRASD-----GVMCRTLEGHAHWVNTLA 387
           + +HT  VT I      + +I SAS+D++I +W+ +      GV  R L GH+H+V  + 
Sbjct: 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 437
Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
           LS+D                                     G+  +SGS D  L LW+  
Sbjct: 438 LSSD-------------------------------------GQFALSGSWDGELRLWD-L 459
Query: 448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL----RGHVQ 503
               S  R  GH + +  V FS D R I SAS D++IKLW+  +G+   T+     GH  
Sbjct: 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRD 518
Query: 504 AVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
            V  V +S ++    +VS S D T+KVWN+   K+   L GH   V  V  +PDG   AS
Sbjct: 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS 578
Query: 562 GGKDKVLRLW 571
           GGKD V+ LW
Sbjct: 579 GGKDGVVLLW 588

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 33/245 (13%)
Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
           HT  V C+++   G   +   ++T +V+R SDG +   L                     
Sbjct: 63  HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARL--------------------- 101
Query: 398 ATSTGGFKYDPANPEESSKHALAKY-QAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLA 454
            +       DP N   SS  +   Y ++ C  P+G+ L +G++D  + +W+ E  +K + 
Sbjct: 102 -SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN-RKIVM 159
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
            + GH+Q I  +++ P G  + S S D+++++WD R G+   TL        +     D 
Sbjct: 160 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219
Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDL-------PGHGDEVYAVDWAPDGEKVASGGKDKV 567
           + + +GS D  ++VW+ +T  + + L        GH D VY+V +  DG+ V SG  D+ 
Sbjct: 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279
Query: 568 LRLWQ 572
           ++LW 
Sbjct: 280 VKLWN 284

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 22/151 (14%)
Query: 442 FLWNPEKEKK---SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL 498
            L+NP   ++    L +   H  ++ CV+FS DG  +A+   +K+ +++    G  +  L
Sbjct: 43  ILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARL 101
Query: 499 RGHVQA------------------VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
                A                  +  V +S D + L +G+ D  +++W+++ +KI   L
Sbjct: 102 SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMIL 161
Query: 541 PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            GH  ++Y++D+ P G+K+ SG  D+ +R+W
Sbjct: 162 QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIW 192

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 288 MRGHK-QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
           +RGH    IT L +E  ++        +   D  IR++D I  + +  L+ H   V  ++
Sbjct: 117 LRGHXTSVITCLQFEDNYV-------ITGADDKXIRVYDSINKKFLLQLSGHDGGVWALK 169
Query: 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
           +   G++ S S DRT++VW    G      EGH   V  L          +       KY
Sbjct: 170 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL----------DIVEYKNIKY 219
Query: 407 DPANPEESSKHA--LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
                 +++ H   L K  +    GE+      D+ L    PE+    +  + GH   + 
Sbjct: 220 IVTGSRDNTLHVWKLPKESSVPDHGEE-----HDYPLVFHTPEENPYFVGVLRGHXASVR 274
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
            V  S  G I+ S S+D ++ +WD    K +  L GH   +Y   +  + +  +S S D+
Sbjct: 275 TV--SGHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKRCISASXDT 332
Query: 525 TLKVWNMKTKKIEQDLPGH 543
           T+++W+++  ++   L GH
Sbjct: 333 TIRIWDLENGELXYTLQGH 351

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 35/227 (15%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE---ESSKHALAKYQAQCPEGEK 431
           TL GH   V T     D  +   A       YD  N +   + S H    +  +   G  
Sbjct: 116 TLRGHXTSVITCLQFEDNYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 175
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI--IASASFDKSIKLWDG 489
           LVSGS D T+ +W+ +K   +     GH   + C++      I  I + S D ++ +W  
Sbjct: 176 LVSGSTDRTVRVWDIKKGCCTHV-FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW-- 232
Query: 490 RIGK-------------------------FITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
           ++ K                         F+  LRGH  +V  V  S    ++VSGS D+
Sbjct: 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHXASVRTV--SGHGNIVVSGSYDN 290
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           TL VW++   K    L GH D +Y+  +  + ++  S   D  +R+W
Sbjct: 291 TLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKRCISASXDTTIRIW 337

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 439 FTLFLWNPEKEKKSLARMTGHQ-QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
           F L  W   K       + GH   +I C++F  D  +I  A  DK I+++D    KF+  
Sbjct: 100 FILKNWYNPKFVPQRTTLRGHXTSVITCLQF-EDNYVITGAD-DKXIRVYDSINKKFLLQ 157
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA--PD 555
           L GH   V+ + ++    +LVSGS D T++VW++K         GH   V  +D     +
Sbjct: 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216
Query: 556 GEKVASGGKDKVLRLWQ 572
            + + +G +D  L +W+
Sbjct: 217 IKYIVTGSRDNTLHVWK 233

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFH 304
            GH   +  + W  DS+ LVS  ++G +  WDS T  ++   P+R    W+   ++ P  
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR--SSWVMTCAYAPSG 109
Query: 305 -------LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
                  L++ C  +    ++G +R+         R L  HT  ++C R+     I ++S
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRV--------SRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G    T  GH   V +L+L+                            
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLA---------------------------- 193
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                    P+    VSG+ D +  LW+  +E       TGH+  IN + F P+G   A+
Sbjct: 194 ---------PDTRLFVSGACDASAKLWDV-REGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 478 ASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  + + T      +  +  V++S   RLL++G  D    VW+     
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
               L GH + V  +    DG  VA+G  D  L++W 
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGF----KYDP----ANPEESSKHALAKYQAQ 425
           RTL GH   +  +   TD  + V A+  G       Y      A P  SS      Y   
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA-- 106
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDK 482
            P G  +  G  D    ++N +  + ++     + GH   ++C  F  D +I+ S S D 
Sbjct: 107 -PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDT 164
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
           +  LWD   G+  TT  GH   V  ++ + D+RL VSG+ D++ K+W+++     Q   G
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           H  ++ A+ + P+G   A+G  D   RL+
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLF 253

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFH 304
            GH   +  + W  DS+ LVS  ++G +  WDS T  ++   P+R    W+   ++ P  
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR--SSWVMTCAYAPSG 109
Query: 305 -------LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
                  L++ C  +    ++G +R+         R L  HT  ++C R+     I ++S
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRV--------SRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G    T  GH   V +L+L+                            
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLA---------------------------- 193
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                    P+    VSG+ D +  LW+  +E       TGH+  IN + F P+G   A+
Sbjct: 194 ---------PDTRLFVSGACDASAKLWDV-REGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 478 ASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  + + T      +  +  V++S   RLL++G  D    VW+     
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
               L GH + V  +    DG  VA+G  D  L++W 
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGF----KYDP----ANPEESSKHALAKYQAQ 425
           RTL GH   +  +   TD  + V A+  G       Y      A P  SS      Y   
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA-- 106
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDK 482
            P G  +  G  D    ++N +  + ++     + GH   ++C  F  D +I+ S S D 
Sbjct: 107 -PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDT 164
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
           +  LWD   G+  TT  GH   V  ++ + D+RL VSG+ D++ K+W+++     Q   G
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           H  ++ A+ + P+G   A+G  D   RL+
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLF 253

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFH 304
            GH   +  + W  DS+ LVS  ++G +  WDS T  ++   P+R    W+   ++ P  
Sbjct: 63  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLR--SSWVMTCAYAPSG 120
Query: 305 -------LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
                  L++ C  +    ++G +R+         R L  HT  ++C R+     I ++S
Sbjct: 121 NYVACGGLDNICSIYNLKTREGNVRV--------SRELAGHTGYLSCCRFLDDNQIVTSS 172
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G    T  GH   V +L+L+                            
Sbjct: 173 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLA---------------------------- 204
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                    P+    VSG+ D +  LW+  +E       TGH+  IN + F P+G   A+
Sbjct: 205 ---------PDTRLFVSGACDASAKLWDV-REGMCRQTFTGHESDINAICFFPNGNAFAT 254
Query: 478 ASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  + + T      +  +  V++S   RLL++G  D    VW+     
Sbjct: 255 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 314
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
               L GH + V  +    DG  VA+G  D  L++W 
Sbjct: 315 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 351

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGF----KYDP----ANPEESSKHALAKYQAQ 425
           RTL GH   +  +   TD  + V A+  G       Y      A P  SS      Y   
Sbjct: 60  RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA-- 117
Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLA---RMTGHQQLINCVEFSPDGRIIASASFDK 482
            P G  +  G  D    ++N +  + ++     + GH   ++C  F  D +I+ S S D 
Sbjct: 118 -PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDT 175
Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG 542
           +  LWD   G+  TT  GH   V  ++ + D+RL VSG+ D++ K+W+++     Q   G
Sbjct: 176 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 235
Query: 543 HGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           H  ++ A+ + P+G   A+G  D   RL+
Sbjct: 236 HESDINAICFFPNGNAFATGSDDATCRLF 264

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 27/259 (10%)
Query: 288 MRGH-KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
           +RGH    IT L +E  ++        +   D  IR++D I  + +  L+ H   V  ++
Sbjct: 117 LRGHMTSVITCLQFEDNYV-------ITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 169
Query: 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKY 406
           +   G++ S S DRT++VW    G      EGH   V  L          +       KY
Sbjct: 170 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCL----------DIVEYKNIKY 219
Query: 407 DPANPEESSKHA--LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN 464
                 +++ H   L K  +    GE+      D+ L    PE+    +  + GH   + 
Sbjct: 220 IVTGSRDNTLHVWKLPKESSVPDHGEE-----HDYPLVFHTPEENPYFVGVLRGHMASVR 274
Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
            V  S  G I+ S S+D ++ +WD    K +  L GH   +Y   +  + +  +S S D+
Sbjct: 275 TV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT 332
Query: 525 TLKVWNMKTKKIEQDLPGH 543
           T+++W+++  ++   L GH
Sbjct: 333 TIRIWDLENGELMYTLQGH 351

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE---ESSKHALAKYQAQCPEGEK 431
           TL GH   V T     D  +   A       YD  N +   + S H    +  +   G  
Sbjct: 116 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 175
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI--IASASFDKSIKLWDG 489
           LVSGS D T+ +W+ +K   +     GH   + C++      I  I + S D ++ +W  
Sbjct: 176 LVSGSTDRTVRVWDIKKGCCTHV-FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW-- 232
Query: 490 RIGK-------------------------FITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
           ++ K                         F+  LRGH+ +V  V  S    ++VSGS D+
Sbjct: 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDN 290
Query: 525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           TL VW++   K    L GH D +Y+  +  + ++  S   D  +R+W
Sbjct: 291 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 337

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Query: 439 FTLFLWNPEKEKKSLARMTGHQ-QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
           F L  W   K       + GH   +I C++F  D  +I  A  DK I+++D    KF+  
Sbjct: 100 FILKNWYNPKFVPQRTTLRGHMTSVITCLQF-EDNYVITGAD-DKMIRVYDSINKKFLLQ 157
Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA--PD 555
           L GH   V+ + ++    +LVSGS D T++VW++K         GH   V  +D     +
Sbjct: 158 LSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 216
Query: 556 GEKVASGGKDKVLRLWQ 572
            + + +G +D  L +W+
Sbjct: 217 IKYIVTGSRDNTLHVWK 233

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFH 304
            GH   +  + W  DS+ L+S  ++G +  WDS T  ++   P+R    W+   ++ P  
Sbjct: 52  RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR--SSWVMTCAYAPSG 109
Query: 305 -------LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
                  L++ C  +    ++G +R+         R L  HT  ++C R+     I ++S
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRV--------SRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G    T  GH   V +L+L+                            
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLA---------------------------- 193
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                    P+    VSG+ D +  LW+  +E       TGH+  IN + F P+G   A+
Sbjct: 194 ---------PDTRLFVSGACDASAKLWDV-REGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 478 ASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  + + T      +  +  V++S   RLL++G  D    VW+     
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
               L GH + V  +    DG  VA+G  D  L++W 
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
           R L  H   +  + WG  S L+ SASQD  + +W +        +   + WV T A +  
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA-- 106
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451
                                              P G  +  G  D    ++N +  + 
Sbjct: 107 -----------------------------------PSGNYVACGGLDNICSIYNLKTREG 131
Query: 452 SLA---RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
           ++     + GH   ++C  F  D +I+ S S D +  LWD   G+  TT  GH   V  +
Sbjct: 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVMSL 190
Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
           + + D+RL VSG+ D++ K+W+++     Q   GH  ++ A+ + P+G   A+G  D   
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Query: 569 RLW 571
           RL+
Sbjct: 251 RLF 253

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 137/337 (40%), Gaps = 58/337 (17%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFH 304
            GH   +  + W  DS+ L+S  ++G +  WDS T  ++   P+R    W+   ++ P  
Sbjct: 52  RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR--SSWVMTCAYAPSG 109
Query: 305 -------LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
                  L++ C  +    ++G +R+         R L  HT  ++C R+     I ++S
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRV--------SRELAGHTGYLSCCRFLDDNQIVTSS 161
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G    T  GH   V +L+L+                            
Sbjct: 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLA---------------------------- 193
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                    P+    VSG+ D +  LW+  +E       TGH+  IN + F P+G   A+
Sbjct: 194 ---------PDTRLFVSGACDASAKLWDV-REGMCRQTFTGHESDINAICFFPNGNAFAT 243
Query: 478 ASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  + + T      +  +  V++S   RLL++G  D    VW+     
Sbjct: 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
               L GH + V  +    DG  VA+G  D  L++W 
Sbjct: 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 42/243 (17%)
Query: 333 RVLTSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
           R L  H   +  + WG  S L+ SASQD  + +W +        +   + WV T A +  
Sbjct: 49  RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYA-- 106
Query: 392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK 451
                                              P G  +  G  D    ++N +  + 
Sbjct: 107 -----------------------------------PSGNYVACGGLDNICSIYNLKTREG 131
Query: 452 SLA---RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
           ++     + GH   ++C  F  D +I+ S S D +  LWD   G+  TT  GH   V  +
Sbjct: 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTS-SGDTTCALWDIETGQQTTTFTGHTGDVMSL 190
Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
           + + D+RL VSG+ D++ K+W+++     Q   GH  ++ A+ + P+G   A+G  D   
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250
Query: 569 RLW 571
           RL+
Sbjct: 251 RLF 253

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 12/159 (7%)
Query: 425 QCPE-GEKLVSGSDDFTLFLWNPEKEKKSLA--------RMTGHQQLINCVEFSPDGRII 475
           Q PE   K+VS S D TL  W P  ++ S          R+ GH   ++ V  S +G   
Sbjct: 23  QTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFVSDVALSNNGNFA 82
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            SAS+D S++LW+ + G+      GH + V  VA+S D+R +VSG  D+ L+VWN+K + 
Sbjct: 83  VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNVKGEC 142
Query: 536 IEQDLPG-HGDEVYAVDWAP--DGEKVASGGKDKVLRLW 571
           +     G H D V  V ++P  D   + SGG D ++++W
Sbjct: 143 MHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVW 181

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 136/336 (40%), Gaps = 53/336 (15%)
Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS-STGKQIGQPMRGHKQWITALSWEPFH 304
           +GH + VLC+ W  D +++VS  ++G +  WDS +T K+    M     W+ A ++ P  
Sbjct: 61  KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC--TWVMACAYAPSG 118
Query: 305 LNHQCRRFASSGKDGAIRIWDVI------LSQCVRVLTSHTRSVTCIRWGGSGL-IYSAS 357
               C      G D    ++ +       ++   + +  HT  ++   +  S + I +AS
Sbjct: 119 CAIAC-----GGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS 173
Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T  +W    G + ++  GH   V  L L+                     P E+   
Sbjct: 174 GDGTCALWDVESGQLLQSFHGHGADVLCLDLA---------------------PSET--- 209
Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS 477
                      G   VSG  D    +W+  +  + +     H+  +N V + P G   AS
Sbjct: 210 -----------GNTFVSGGCDKKAMVWDM-RSGQCVQAFETHESDVNSVRYYPSGDAFAS 257
Query: 478 ASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
            S D + +L+D R  +   I +    +     V +S   RLL +G  D T+ VW++    
Sbjct: 258 GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317
Query: 536 IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
               L GH + V  +  +PDG    SG  D  LR+W
Sbjct: 318 RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVW 353

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 27/260 (10%)
Query: 333 RVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTD 391
           R L  H   V C+ W      I S+SQD  + VW +        +     WV   A    
Sbjct: 58  RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACA---- 113
Query: 392 YLMRVEATSTGGFK---------YDPANPEESSKHALA---KYQAQCP---EGEKLVSGS 436
           Y     A + GG           +D      + K ++A    Y + C       ++++ S
Sbjct: 114 YAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTAS 173
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKLWDGRIGKF 494
            D T  LW+ E   + L    GH   + C++ +P   G    S   DK   +WD R G+ 
Sbjct: 174 GDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC 232
Query: 495 ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY---AVD 551
           +     H   V  V +        SGS D+T ++++++  + E  +      ++   +VD
Sbjct: 233 VQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR-EVAIYSKESIIFGASSVD 291
Query: 552 WAPDGEKVASGGKDKVLRLW 571
           ++  G  + +G  D  + +W
Sbjct: 292 FSLSGRLLFAGYNDYTINVW 311

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 491 IGKFIT----TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE 546
           +G+F+     TL+GH   V  + W  D R +VS S D  + VW+  T   E  +      
Sbjct: 49  LGQFVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTW 108
Query: 547 VYAVDWAPDGEKVASGGKDKVLRLW 571
           V A  +AP G  +A GG D    ++
Sbjct: 109 VMACAYAPSGCAIACGGLDNKCSVY 133

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 13  LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 64
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     + +I S
Sbjct: 65  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIIS 124
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+ +        RV              P E +
Sbjct: 125 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQV--------RVV-------------PNEKA 162
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 163 DD----------DSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 211
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K + TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 212 ASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269
Query: 536 IEQDL----PGHGD--EVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 13  LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 64
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     + +I S
Sbjct: 65  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIIS 124
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+ +        RV              P E +
Sbjct: 125 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQV--------RVV-------------PNEKA 162
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 163 DD----------DSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 211
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K + TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 212 ASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269
Query: 536 IEQDL----PGH--GDEVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 270 LVDDLRPEFAGYSAAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 13  LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 64
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     + +I S
Sbjct: 65  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIIS 124
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+ +        RV              P E +
Sbjct: 125 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQV--------RVV-------------PNEKA 162
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 163 DD----------DSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 211
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K + TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 212 ASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269
Query: 536 IEQDL----PGHGD--EVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 148/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 7   LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 58
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     + +I S
Sbjct: 59  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIIS 118
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+ +        RV              P E +
Sbjct: 119 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQV--------RVV-------------PNEKA 156
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 157 DD----------DSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 205
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K + TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 206 ASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 263
Query: 536 IEQDL----PGHGD--EVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 264 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 308

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 147/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 13  LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 64
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     + +I S
Sbjct: 65  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIIS 124
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+ + +                      P E +
Sbjct: 125 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVV---------------------PNEKA 162
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 163 DD----------DSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 211
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K + TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 212 ASAGKDGEIMLWNLAAKKAMYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269
Query: 536 IEQDL----PGHGD--EVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 150/392 (38%), Gaps = 92/392 (23%)
Query: 203 MPGHAEA-VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWS 258
           +P H ++    + ++P G  LAS  GD  +R W     + + K    EGH+  V  +AWS
Sbjct: 11  VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWS 70
Query: 259 PDSKQLVSGCKNGVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
           P    L S   +     W  +    +    + GH+  + +++W P          A+  +
Sbjct: 71  PCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-----NLLATCSR 125
Query: 318 DGAIRIWDVILS---QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS--DGV 371
           D ++ +W+V      +CV VL SHT+ V  + W  S  L+ SAS D T+K++R    D V
Sbjct: 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185
Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK 431
            C TLEGH   V +LA                                       P G++
Sbjct: 186 CCATLEGHESTVWSLAFD-------------------------------------PSGQR 208
Query: 432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI 491
           L S SDD T+ +W           + G++Q + C    P                     
Sbjct: 209 LASCSDDRTVRIWR--------QYLPGNEQGVACSGSDPS-------------------- 240
Query: 492 GKFITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD---------LP 541
            K I TL G H + +Y +AW   +  L +   D  ++V+        Q            
Sbjct: 241 WKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQ 300
Query: 542 GHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQ 572
            H  +V  V W P +   +AS   D  +  W+
Sbjct: 301 AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWK 332

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 146/347 (42%), Gaps = 67/347 (19%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAW----DSSTGKQIGQPMRGHKQWITALSW 300
           +GH  WV  IA +P    ++ S  ++  I  W    D +      + +RGH  +++ +  
Sbjct: 35  KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 92
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
               +     +FA SG  DG +R+WD+      R    HT+ V  + +      I S S+
Sbjct: 93  ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 148
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416
           D+TIK+W  + GV   T+  E H+ WV+ +                 F  + +NP     
Sbjct: 149 DKTIKLWN-TLGVCKYTVQDESHSEWVSCVR----------------FSPNSSNP----- 186
Query: 417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
                          +VS   D  + +WN    K     + GH   +N V  SPDG + A
Sbjct: 187 --------------IIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCA 231
Query: 477 SASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
           S   D    LWD   GK + TL G   + A+      S +R  +  +   ++K+W+++ K
Sbjct: 232 SGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF----SPNRYWLCAATGPSIKIWDLEGK 287
Query: 535 KIEQDL---------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
            I  +L              +  ++ W+ DG+ + +G  D ++R+WQ
Sbjct: 288 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 146/345 (42%), Gaps = 60/345 (17%)
Query: 245 CEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWD-SSTGKQIGQPMRGHKQWITALSWEP 302
            EGH  WV  +A S     L+ S  ++  + +W  +   ++ G P+R  K          
Sbjct: 13  LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG--------H 64
Query: 303 FHLNHQCRRFA------SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYS 355
            H+   C   A      S+  D  +R+WDV   +  +    H   V  +     +  I S
Sbjct: 65  SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIIS 124
Query: 356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS 415
            S+D+TIKVW    G    TL GH  WV+         +RV              P E +
Sbjct: 125 GSRDKTIKVWTIK-GQCLATLLGHNDWVSQ--------VRVV-------------PNEKA 162
Query: 416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
                       +   ++S  +D  +  WN  + +   A   GH   IN +  SPDG +I
Sbjct: 163 DD----------DSVTIISAGNDKXVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGTLI 211
Query: 476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK 535
           ASA  D  I LW+    K   TL    + V+ +A+S +   L + +A + +KV+++  + 
Sbjct: 212 ASAGKDGEIXLWNLAAKKAXYTLSAQDE-VFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269
Query: 536 IEQDL----PGHGD--EVYAVD--WAPDGEKVASGGKDKVLRLWQ 572
           +  DL     G+    E +AV   W+ DG+ + +G  D V+R+WQ
Sbjct: 270 LVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/347 (24%), Positives = 146/347 (42%), Gaps = 67/347 (19%)
Query: 246 EGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAW----DSSTGKQIGQPMRGHKQWITALSW 300
           +GH  WV  IA +P    ++ S  ++  I  W    D +      + +RGH  +++ +  
Sbjct: 12  KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV-- 69
Query: 301 EPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQ 358
               +     +FA SG  DG +R+WD+      R    HT+ V  + +      I S S+
Sbjct: 70  ----VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR 125
Query: 359 DRTIKVWRASDGVMCRTL--EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK 416
           D+TIK+W  + GV   T+  E H+ WV+ +                 F  + +NP     
Sbjct: 126 DKTIKLWN-TLGVCKYTVQDESHSEWVSCVR----------------FSPNSSNP----- 163
Query: 417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA 476
                          +VS   D  + +WN    K     + GH   +N V  SPDG + A
Sbjct: 164 --------------IIVSCGWDKLVKVWNLANCKLKTNHI-GHTGYLNTVTVSPDGSLCA 208
Query: 477 SASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
           S   D    LWD   GK + TL G   + A+      S +R  +  +   ++K+W+++ K
Sbjct: 209 SGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF----SPNRYWLCAATGPSIKIWDLEGK 264
Query: 535 KIEQDL---------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
            I  +L              +  ++ W+ DG+ + +G  D ++R+WQ
Sbjct: 265 IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 311

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY----LFYVNET 160
           S+ GH   V+SV  S      AS S D  +R WD+     +   +  P     L +  ++
Sbjct: 75  SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 134
Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
           +   T   V  ++    E                   +   S+    + ++S+ +SP+G+
Sbjct: 135 QYLATGTHVGKVNIFGVES-----------------GKKEYSLDTRGKFILSIAYSPDGK 177
Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
            LASG+ D  +  +D+ T   L   EGH   +  + +SPDS+ LV+   +G I  +D   
Sbjct: 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237
Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
               G  + GH  W+  +++ P         F SS  D ++++WDV    CV     H  
Sbjct: 238 ANLAG-TLSGHASWVLNVAFCP-----DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD 291
Query: 341 SVTCIRWGGSG-LIYSASQDRTIKVW 365
            V  +++ G+G  I S   D+ I ++
Sbjct: 292 QVWGVKYNGNGSKIVSVGDDQEIHIY 317

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 6/222 (2%)
Query: 355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG---FKYDPANP 411
           S+S D  I++W   +G   ++++       TLA S D       T  G    F  +    
Sbjct: 97  SSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156
Query: 412 EES--SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS 469
           E S  ++       A  P+G+ L SG+ D  + +++     K L  + GH   I  + FS
Sbjct: 157 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFS 215
Query: 470 PDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
           PD +++ +AS D  IK++D +      TL GH   V  VA+  D    VS S+D ++KVW
Sbjct: 216 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 275
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           ++ T+        H D+V+ V +  +G K+ S G D+ + ++
Sbjct: 276 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 120/283 (42%), Gaps = 48/283 (16%)
Query: 210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
           V SVK+S +G  L+ G G+  V  +DV +QT L    GH+  V C++W  +   L SG +
Sbjct: 137 VASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR 194
Query: 270 NGVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL 328
           +G IH  D      QIG  ++GH   +  L+W    L     + AS G D  ++IWD   
Sbjct: 195 SGAIHHHDVRIANHQIGT-LQGHSSEVCGLAWRSDGL-----QLASGGNDNVVQIWDARS 248
Query: 329 SQCVRVLTSHTRSVTCIRWG--GSGLIYS--ASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
           S      T+H  +V  + W    S L+ +   + D+ I  W A+ G    T++  +  V 
Sbjct: 249 SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQ-VT 307
Query: 385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW 444
           +L  S       E  ST GF  +  +    S   L K Q   P                 
Sbjct: 308 SLIWSP---HSKEIMSTHGFPDNNLSIWSYSSSGLTK-QVDIP----------------- 346
Query: 445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
                         H   +     SPDGRI+++A+ D+++K W
Sbjct: 347 -------------AHDTRVLYSALSPDGRILSTAASDENLKFW 376

>pdb|4AEZ|A Chain A, Crystal Structure Of Mitotic Checkpoint Complex Length = 401

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 61/311 (19%), Positives = 118/311 (37%), Gaps = 59/311 (18%)
Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
           ++ W++ +G            ++ ++ W     +H     +    +G + I+DV     +
Sbjct: 115 VYVWNADSGSVSALAETDESTYVASVKW-----SHDGSFLSVGLGNGLVDIYDVESQTKL 169
Query: 333 RVLTSHTRSVTCIRWG----GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
           R +  H   V C+ W      SG    A     +++     G    TL+GH+  V  LA 
Sbjct: 170 RTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIG----TLQGHSSEVCGLAW 225
Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
            +D                                     G +L SG +D  + +W+   
Sbjct: 226 RSD-------------------------------------GLQLASGGNDNVVQIWDARS 248
Query: 449 EKKSLARMTGHQQLINCVEFSP-DGRIIASA--SFDKSIKLWDGRIGKFITTLRGHVQAV 505
                 + T H   +  V + P    ++A+   + DK I  W+   G  + T+    Q  
Sbjct: 249 SIPKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVT 307
Query: 506 YMVAWSSDSRLLVS--GSADSTLKVWNMKTKKIEQ--DLPGHGDEVYAVDWAPDGEKVAS 561
            ++ WS  S+ ++S  G  D+ L +W+  +  + +  D+P H   V     +PDG  +++
Sbjct: 308 SLI-WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366
Query: 562 GGKDKVLRLWQ 572
              D+ L+ W+
Sbjct: 367 AASDENLKFWR 377

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 353 IYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
           + S S D T+K+W   ++  + +T EGH H+V  +A                      NP
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF---------------------NP 150
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP- 470
           ++ S  A               SG  D T+ +W+  +   +    TG ++ +N V++ P 
Sbjct: 151 KDPSTFA---------------SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195
Query: 471 -DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
            D   + +AS D +IK+WD +    + TL GH+  V    +     +++SGS D TLK+W
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASG 562
           N  T K+E+ L    +  + +   P G K  +ASG
Sbjct: 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
           I   S D  I++++   G+ +     H   +  +A       ++SGS D T+K+WN +  
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 535 -KIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLW 571
             +EQ   GH   V  V + P D    ASG  D+ +++W
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 353 IYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
           + S S D T+K+W   ++  + +T EGH H+V  +A                      NP
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF---------------------NP 150
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP- 470
           ++ S  A               SG  D T+ +W+  +   +    TG ++ +N V++ P 
Sbjct: 151 KDPSTFA---------------SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195
Query: 471 -DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
            D   + +AS D +IK+WD +    + TL GH+  V    +     +++SGS D TLK+W
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASG 562
           N  T K+E+ L    +  + +   P G K  +ASG
Sbjct: 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
           I   S D  I++++   G+ +     H   +  +A       ++SGS D T+K+WN +  
Sbjct: 70  IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 535 -KIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLW 571
             +EQ   GH   V  V + P D    ASG  D+ +++W
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 114/292 (39%), Gaps = 54/292 (18%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
           PG  E + SV +   G  LA G+    V+ WDV  Q  L     H   V  ++W  +S  
Sbjct: 146 PG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI 201
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
           L SG ++G IH  D    +     + GH Q +  L W P       R  AS G D  + +
Sbjct: 202 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNV 256
Query: 324 WDVILSQC----VRVLTSHTRSVTCIRWG--GSGLIYS--ASQDRTIKVWRASDGVMCRT 375
           W     +     ++  T H  +V  + W    S ++ +   + DR I++W    G     
Sbjct: 257 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435
           ++ H+   + L                   + P   E  S H  A+ Q            
Sbjct: 317 VDAHSQVCSIL-------------------WSPHYKELISGHGFAQNQ------------ 345
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
                L +W      K +A + GH   +  +  SPDG  +ASA+ D++++LW
Sbjct: 346 -----LVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 391

>pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 318 DGAIRIWDVILSQCVRVLT-----SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM 372
           D ++ +W       +++L       +  SV  I+ G    + ++S +  +++W       
Sbjct: 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE--VQLWDVQQQKR 181
Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC-----P 427
            R +  H+  V +L+ ++ Y++   + S     +D    E          Q  C     P
Sbjct: 182 LRNMTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 240
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKS---LARMTGHQQLINCVEFSP-DGRIIASA--SFD 481
           +G  L SG +D  + +W     +     L   T HQ  +  V + P    ++A+   + D
Sbjct: 241 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMKTKKIEQD 539
           + I++W+   G  ++ +  H Q V  + WS   + L+SG   A + L +W   T     +
Sbjct: 301 RHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE 359
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           L GH   V ++  +PDG  VAS   D+ LRLW+
Sbjct: 360 LKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 114/292 (39%), Gaps = 54/292 (18%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
           PG  E + SV +   G  LA G+    V+ WDV  Q  L     H   V  ++W  +S  
Sbjct: 157 PG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI 212
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
           L SG ++G IH  D    +     + GH Q +  L W P       R  AS G D  + +
Sbjct: 213 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNV 267
Query: 324 WDVILSQC----VRVLTSHTRSVTCIRWG--GSGLIYS--ASQDRTIKVWRASDGVMCRT 375
           W     +     ++  T H  +V  + W    S ++ +   + DR I++W    G     
Sbjct: 268 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 327
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435
           ++ H+   + L                   + P   E  S H  A+ Q            
Sbjct: 328 VDAHSQVCSIL-------------------WSPHYKELISGHGFAQNQ------------ 356
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
                L +W      K +A + GH   +  +  SPDG  +ASA+ D++++LW
Sbjct: 357 -----LVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 402

>pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 318 DGAIRIWDVILSQCVRVLT-----SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM 372
           D ++ +W       +++L       +  SV  I+ G    + ++S +  +++W       
Sbjct: 135 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE--VQLWDVQQQKR 192
Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC-----P 427
            R +  H+  V +L+ ++ Y++   + S     +D    E          Q  C     P
Sbjct: 193 LRNMTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 251
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKS---LARMTGHQQLINCVEFSP-DGRIIASA--SFD 481
           +G  L SG +D  + +W     +     L   T HQ  +  V + P    ++A+   + D
Sbjct: 252 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 311
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMKTKKIEQD 539
           + I++W+   G  ++ +  H Q V  + WS   + L+SG   A + L +W   T     +
Sbjct: 312 RHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE 370
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           L GH   V ++  +PDG  VAS   D+ LRLW+
Sbjct: 371 LKGHTSRVLSLTMSPDGATVASAAADETLRLWR 403

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 114/292 (39%), Gaps = 54/292 (18%)
Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ 263
           PG  E + SV +   G  LA G+    V+ WDV  Q  L     H   V  ++W  +S  
Sbjct: 66  PG--EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYI 121
Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
           L SG ++G IH  D    +     + GH Q +  L W P       R  AS G D  + +
Sbjct: 122 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNV 176
Query: 324 WDVILSQC----VRVLTSHTRSVTCIRWG--GSGLIYS--ASQDRTIKVWRASDGVMCRT 375
           W     +     ++  T H  +V  + W    S ++ +   + DR I++W    G     
Sbjct: 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 236
Query: 376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG 435
           ++ H+   + L                   + P   E  S H  A+ Q            
Sbjct: 237 VDAHSQVCSIL-------------------WSPHYKELISGHGFAQNQ------------ 265
Query: 436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW 487
                L +W      K +A + GH   +  +  SPDG  +ASA+ D++++LW
Sbjct: 266 -----LVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311

>pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 22/273 (8%)
Query: 318 DGAIRIWDVILSQCVRVLT-----SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM 372
           D ++ +W       +++L       +  SV  I+ G    + ++S +  +++W       
Sbjct: 44  DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE--VQLWDVQQQKR 101
Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC-----P 427
            R +  H+  V +L+ ++ Y++   + S     +D    E          Q  C     P
Sbjct: 102 LRNMTSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP 160
Query: 428 EGEKLVSGSDDFTLFLWNPEKEKKS---LARMTGHQQLINCVEFSP-DGRIIASA--SFD 481
           +G  L SG +D  + +W     +     L   T HQ  +  V + P    ++A+   + D
Sbjct: 161 DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220
Query: 482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMKTKKIEQD 539
           + I++W+   G  ++ +  H Q V  + WS   + L+SG   A + L +W   T     +
Sbjct: 221 RHIRIWNVCSGACLSAVDAHSQ-VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE 279
Query: 540 LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           L GH   V ++  +PDG  VAS   D+ LRLW+
Sbjct: 280 LKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 115/239 (48%), Gaps = 23/239 (9%)
Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE 413
           YS +Q RT   +  +D V CRTL+GH+  V +L  + +    V A+  G  +    N   
Sbjct: 40  YSKAQGRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDG--RLIVWNALT 97
Query: 414 SSK-HAL---AKYQAQC---PEGEKLVSGSDDFTLFLWNPEKEKKSLARM------TGHQ 460
           S K HA+     +  +C   P G+ +  G  D    ++N   +      M      TGH+
Sbjct: 98  SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHK 157
Query: 461 QLINCVEFSPDGRI-IASASFDKSIKLWDGRIGKFITTL-----RGHVQAVYMVAWSS-D 513
              +  ++ PD    + + S D++  LWD   G+ I+        GH   V  ++ +S +
Sbjct: 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217
Query: 514 SRLLVSGSADSTLKVWNMK-TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           + + +SGS D+T+++W+++ T +  +   GH  ++ +V + PDG++  +G  D   RL+
Sbjct: 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 353 IYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
           + S S D T+K+W   ++  + +T EGH H+V  +A                      NP
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF---------------------NP 150
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP- 470
           ++ S  A               SG  D T+ +W+  +   +    TG ++ +N V++ P 
Sbjct: 151 KDPSTFA---------------SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195
Query: 471 -DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
            D   + +AS D +IK+WD +    + TL GH+  V    +     +++SGS D TLK+W
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASG 562
           N  T K+E+ L    +  + +   P G K  +ASG
Sbjct: 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 353 IYSASQDRTIKVWR-ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP 411
           + S S D T+K+W   ++  + +T EGH H+V  +A                      NP
Sbjct: 112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF---------------------NP 150
Query: 412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP- 470
           ++ S  A               SG  D T+ +W+  +   +    TG ++ +N V++ P 
Sbjct: 151 KDPSTFA---------------SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL 195
Query: 471 -DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
            D   + +AS D +IK+WD +    + TL GH+  V    +     +++SGS D TLK+W
Sbjct: 196 PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255
Query: 530 NMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASG 562
           N  T K+E+ L    +  + +   P G K  +ASG
Sbjct: 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASG 290

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 203/503 (40%), Gaps = 71/503 (14%)
Query: 105 SMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
           ++ G A A+ SV F P+    + SGS D TV  +           EG P+ F     E T
Sbjct: 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF-----------EGPPFKFKSTFGEHT 190
Query: 164 KTLADVL--PLDTLNTEEVVD---IVYQ-----KQAVFQVRPVTRCTSSMPGHAEAVISV 213
           K +  V   P  +L      D   ++Y      K  VF+   +         H+ +V  +
Sbjct: 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNV-----AHSGSVFGL 245
Query: 214 KFSPNGRSLASGSGDTTVRFWDVTT-----QTPL-FKCEGHKHWVLCIAWSPDSKQLVSG 267
            +SP+G  +AS S D T++ W+V T       P+  + E  +   L I W+   + LVS 
Sbjct: 246 TWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQ---LGIIWT--KQALVSI 300
Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
             NG I+  +   G  I Q   GH + ITALS          +   S+  +G I  WD+ 
Sbjct: 301 SANGFINFVNPELG-SIDQVRYGHNKAITALSSSA-----DGKTLFSADAEGHINSWDIS 354
Query: 328 LSQCVRVLTS-HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNT- 385
                RV    H   +T I+    G +++ S D  +KV  A  G    + +  A+ +++ 
Sbjct: 355 TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG-GSGVDSSKAVANKLSSQ 413
Query: 386 ---LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC----PEGEKLVSGSDD 438
              LA+S D  + V A     +K+               Y + C     + + +  G  D
Sbjct: 414 PLGLAVSADGDIAVAAC----YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQD 469
Query: 439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK----- 493
             + ++       S  +   H   I  V FS +G  + +   D+S K+    +       
Sbjct: 470 SKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT--DQSRKVIPYSVANNFELA 527
Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG----DEVYA 549
              +   H   V  V+WS D+  L +GS D+++ VWNM  K  +  +   G      V +
Sbjct: 528 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN-KPSDHPIIIKGAHAMSSVNS 586
Query: 550 VDWAPDGEKVASGGKDKVLRLWQ 572
           V W  +   + S G+D  ++ W 
Sbjct: 587 VIWLNE-TTIVSAGQDSNIKFWN 608

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 452 SLARMTGHQQLINCVEFSPDG--RIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
           S   +TG  + +N V+F P    RII S S D ++ +++G   KF +T   H + V+ V 
Sbjct: 139 SNGNLTGQARAMNSVDFKPSRPFRII-SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVR 197
Query: 510 WSSDSRLLVSGSADSTLKVWN----MKTKKIEQDL---PGHGDEVYAVDWAPDGEKVASG 562
           ++ D  L  S   D T+ ++N     KT   E D      H   V+ + W+PDG K+AS 
Sbjct: 198 YNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257
Query: 563 GKDKVLRLWQ 572
             DK +++W 
Sbjct: 258 SADKTIKIWN 267

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 105/264 (39%), Gaps = 65/264 (24%)
Query: 334 VLTSHTRSVTCIRWG-------GSGLIYSASQDRTIKVWRASD-------GVMCRTLEGH 379
           +L  H+  VT I  G        S ++ S S+D+T+ +W+  +       G+  + L GH
Sbjct: 16  ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGH 75
Query: 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439
            H+V+ LALS                                 Q  C      +S S D 
Sbjct: 76  NHFVSDLALS---------------------------------QENCFA----ISSSWDK 98
Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITT 497
           TL LW+  +   +  R  GHQ  +  V FSPD R I SA  ++ IKLW+  G        
Sbjct: 99  TLRLWDL-RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE 157
Query: 498 LRGHVQAVYMVAWSSDSR----------LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
              H   V  V +S   +             S   D  LKVWN   + I      H   V
Sbjct: 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ-IRYTFKAHESNV 216
Query: 548 YAVDWAPDGEKVASGGKDKVLRLW 571
             +  +P+G+ +A+GGKDK L +W
Sbjct: 217 NHLSISPNGKYIATGGKDKKLLIW 240

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 18/168 (10%)
Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKS------LARMTGHQQLINCVEFSPDGRIIA 476
           Q +  +   L+SGS D T+ +W   +E+++         +TGH   ++ +  S +     
Sbjct: 33  QKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92
Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNM--KTK 534
           S+S+DK+++LWD R G       GH   VY VA+S D+R ++S  A+  +K+WN+  + K
Sbjct: 93  SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK 152
Query: 535 KIEQDLPGHGDEVYAVDWAP---DGEKV-------ASGGKDKVLRLWQ 572
               +   H D V  V ++P      KV       AS G D  L++W 
Sbjct: 153 FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN 200

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 115/287 (40%), Gaps = 40/287 (13%)
Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV 334
           A  +S+GK   Q        +T L+W     +H      +  ++G +R+W+      + V
Sbjct: 99  ALSASSGKTTNQ--------VTCLAW-----SHDGNSIVTGVENGELRLWNKT-GALLNV 144
Query: 335 LTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL 393
           L  H   +  ++W   G  I S   +    +W    G +                    +
Sbjct: 145 LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV--------------------M 184
Query: 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL 453
              E   TGG      N E  S         +  + +K V       +F++    EK   
Sbjct: 185 QHFELKETGG---SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQI-TEKTPT 240
Query: 454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
            ++ GH   I+ +EF+   +++ SAS D ++++W G  G       GH Q++   +W  D
Sbjct: 241 GKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD 300
Query: 514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA 560
            + ++S S D ++++W++K   +       G  ++A   + DG+K A
Sbjct: 301 DK-VISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYA 346

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W  +  G + SAS D TI +W  +                    +T  
Sbjct: 179 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDIN--------------------ATPK 218
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
             RV   +   F    A  E+ + H L +            S +DD  L +W+      S
Sbjct: 219 EHRV-IDAKNIFTGHTAVVEDVAWHLLHE--------SLFGSVADDQKLMIWDTRNNNTS 269
Query: 453 LARMT--GHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
               T   H   +NC+ F+P    I+A+ S DK++ LWD R  K  + +   H   ++ V
Sbjct: 270 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 329
Query: 509 AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 330 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 389
Query: 554 PDGE-KVASGGKDKVLRLWQ 572
           P+    + S  +D ++++WQ
Sbjct: 390 PNEPWIICSVSEDNIMQVWQ 409

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W  +  G + SAS D TI +W  +                    +T  
Sbjct: 177 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDIN--------------------ATPK 216
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
             RV   +   F    A  E+ + H L +            S +DD  L +W+      S
Sbjct: 217 EHRV-IDAKNIFTGHTAVVEDVAWHLLHE--------SLFGSVADDQKLMIWDTRNNNTS 267
Query: 453 LARMT--GHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
               T   H   +NC+ F+P    I+A+ S DK++ LWD R  K  + +   H   ++ V
Sbjct: 268 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327
Query: 509 AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 387
Query: 554 PDGE-KVASGGKDKVLRLWQ 572
           P+    + S  +D ++++WQ
Sbjct: 388 PNEPWIICSVSEDNIMQVWQ 407

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
           STD  +++ +     F       E + K A+ +  A  P    L +GS D T+ +W  E+
Sbjct: 31  STDRKIKLVSVKYDDFTLIDVLDETAHKKAI-RSVAWRPHTSLLAAGSFDSTVSIWAKEE 89
Query: 449 ------EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD----GRIGKFITTL 498
                 E   LA + GH+  +  V +S DG  +A+ S DKS+ +W+    G   + I+ L
Sbjct: 90  SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL 149
Query: 499 RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDWAPDG 556
           + H Q V  V W     LL S S D T+++W       E    L GH   V    W+ D 
Sbjct: 150 QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV----WSSDF 205
Query: 557 EK------VASGGKDKVLRLWQ 572
           +K      + SG  D  +R+W+
Sbjct: 206 DKTEGVFRLCSGSDDSTVRVWK 227

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 13/125 (10%)
Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF----ITTLRGHVQAVYMVAWSSDS 514
           +++ I   +FS    I+A+ S D+ IKL   +   F    +     H +A+  VAW   +
Sbjct: 13  YKEKIWSFDFSQ--GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHT 70
Query: 515 RLLVSGSADSTLKVWNMKT---KKIEQDL----PGHGDEVYAVDWAPDGEKVASGGKDKV 567
            LL +GS DST+ +W  +    +  E DL     GH +EV  V W+ DG  +A+  +DK 
Sbjct: 71  SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKS 130
Query: 568 LRLWQ 572
           + +W+
Sbjct: 131 VWIWE 135

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W  +  G + SAS D TI +W  +                    +T  
Sbjct: 181 LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDIN--------------------ATPK 220
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
             RV   +   F    A  E+ + H L +            S +DD  L +W+      S
Sbjct: 221 EHRV-IDAKNIFTGHTAVVEDVAWHLLHE--------SLFGSVADDQKLMIWDTRNNNTS 271
Query: 453 LARMT--GHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
               T   H   +NC+ F+P    I+A+ S DK++ LWD R  K  + +   H   ++ V
Sbjct: 272 KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 331
Query: 509 AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 332 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWN 391
Query: 554 PDGE-KVASGGKDKVLRLWQ 572
           P+    + S  +D ++++WQ
Sbjct: 392 PNEPWIICSVSEDNIMQVWQ 411

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W    SG + SAS D TI +W  S        EG    V+   + T +
Sbjct: 173 LRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS----AVPKEGKV--VDAKTIFTGH 226
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-- 450
              V               E+ S H L +            S +DD  L +W+       
Sbjct: 227 TAVV---------------EDVSWHLLHE--------SLFGSVADDQKLMIWDTRSNNTS 263
Query: 451 KSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
           K    +  H   +NC+ F+P    I+A+ S DK++ LWD R  K  + +   H   ++ V
Sbjct: 264 KPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 323
Query: 509 AWSSDSR-LLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 324 QWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWN 383
Query: 554 PDGE-KVASGGKDKVLRLWQ 572
           P+    + S  +D ++++WQ
Sbjct: 384 PNEPWVICSVSEDNIMQVWQ 403

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 103/260 (39%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W    SG + SAS D T+ +W  + G      EG    V+  A+ T +
Sbjct: 175 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK----EGKI--VDAKAIFTGH 228
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE--K 450
              V               E+ + H L +            S +DD  L +W+       
Sbjct: 229 SAVV---------------EDVAWHLLHE--------SLFGSVADDQKLXIWDTRSNTTS 265
Query: 451 KSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
           K    +  H   +NC+ F+P    I+A+ S DK++ LWD R  K  + T   H   ++ V
Sbjct: 266 KPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQV 325
Query: 509 AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 326 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWN 385
Query: 554 PDGEKV-ASGGKDKVLRLWQ 572
           P+   V  S  +D + ++WQ
Sbjct: 386 PNEPWVICSVSEDNIXQIWQ 405

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 51/260 (19%)
Query: 335 LTSHTRSVTCIRWGG--SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
           L  H +    + W    SG + SAS D T+ +W  + G      EG    V+  A+ T +
Sbjct: 175 LRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPK----EGKI--VDAKAIFTGH 228
Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS 452
              V               E+ + H L +            S +DD  L +W+      S
Sbjct: 229 SAVV---------------EDVAWHLLHE--------SLFGSVADDQKLMIWDTRSNTTS 265
Query: 453 LAR--MTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRGHVQAVYMV 508
                +  H   +NC+ F+P    I+A+ S DK++ LWD R  K  + T   H   ++ V
Sbjct: 266 KPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQV 325
Query: 509 AWS-SDSRLLVSGSADSTLKVWNMKTKKIEQ------DLP--------GHGDEVYAVDWA 553
            WS  +  +L S   D  L VW++     EQ      D P        GH  ++    W 
Sbjct: 326 HWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWN 385
Query: 554 PDGE-KVASGGKDKVLRLWQ 572
           P+    + S  +D ++++WQ
Sbjct: 386 PNEPWVICSVSEDNIMQIWQ 405

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 451 KSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLR-------GHV 502
           K++  + GH   +  + + P +  +IAS S D ++ +W+   G  +  LR       GH 
Sbjct: 72  KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131
Query: 503 QAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQDLPG--HGDEVYAVDWAPDGEKV 559
           + V +VAW   ++ +L+S   D+ + VW++ T      L    H D +Y+VDW+ DG  +
Sbjct: 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191
Query: 560 ASGGKDKVLRL 570
            +  +DK +R+
Sbjct: 192 CTSCRDKRVRV 202

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 38/232 (16%)
Query: 203 MPGHAEAVIS--VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-----HKH--WVL 253
           + GH++ + +  +K S   RS+  G  D +V F+    Q P FK        HK   +V 
Sbjct: 156 VSGHSQRINACHLKQSRPMRSMTVGD-DGSVVFY----QGPPFKFSASDRTHHKQGSFVR 210
Query: 254 CIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIG------QPMRGHKQWITALSWEPFHLN 306
            + +SPDS + V +   +  I  +D  +G+ +       +P++G    I ALSW    L+
Sbjct: 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG---IFALSW----LD 263
Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG----GSGLIYSASQDRTI 362
            Q  +FA+ G D  IR+WDV  S+CV+  T   + +   + G    G+G I S S D T+
Sbjct: 264 SQ--KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 321
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLA----LSTDYLMRVEATSTGGFKYDPAN 410
             +      + +T+ GH   +  L     +S  Y  R+   S+     D +N
Sbjct: 322 NFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSN 373

>pdb|1PI6|A Chain A, Yeast Actin Interacting Protein 1 (Aip1), Orthorhombic Crystal Form Length = 615

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQ--LINCVEFSPD-GRIIASASFDKSIKLWDGRIGK 493
           DD ++  +     K S +  T H+Q   +  VEFSPD G  + +   D+ I  +DG+ G+
Sbjct: 181 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240
Query: 494 FITTLRGHVQ----AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
           F+  +    +     ++ ++W  DS+   +  AD+T++VW++ T K  Q
Sbjct: 241 FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 451 KSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLR-------GHV 502
           K++  + GH   +  + + P +  +IAS S D ++ +W+   G  +  LR       GH 
Sbjct: 72  KNVPLVXGHTAPVLDIAWXPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT 131
Query: 503 QAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQDLPG--HGDEVYAVDWAPDGEKV 559
           + V +VAW   ++ +L+S   D+ + VW++ T      L    H D +Y+VDW+ DG  +
Sbjct: 132 KRVGIVAWHPTAQNVLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191
Query: 560 ASGGKDKVLRL 570
            +  +DK +R+
Sbjct: 192 CTSCRDKRVRV 202

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
           P+G  L+ G +  TL +W+       + A +T        +  SPD ++  S   D +I 
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT-KKIEQDLPGHG 544
           +WD      +   +GH      +  S+D   L +G  D+T++ W+++  ++++Q      
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH--DFT 224
Query: 545 DEVYAVDWAPDGEKVASG 562
            +++++ + P GE +A G
Sbjct: 225 SQIFSLGYCPTGEWLAVG 242

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 34/207 (16%)
Query: 203 MPGHAEAVIS--VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-----HKH--WVL 253
           + GH++ + +  +K S   RS   G  D +V F+    Q P FK        HK   +V 
Sbjct: 156 VSGHSQRINACHLKQSRPXRSXTVGD-DGSVVFY----QGPPFKFSASDRTHHKQGSFVR 210
Query: 254 CIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIG------QPMRGHKQWITALSWEPFHLN 306
            + +SPDS + V +   +  I  +D  +G+ +       +P++G    I ALSW    L+
Sbjct: 211 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG---IFALSW----LD 263
Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG----GSGLIYSASQDRTI 362
            Q  +FA+ G D  IR+WDV  S+CV+  T   + +   + G    G+G I S S D T+
Sbjct: 264 SQ--KFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 321
Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALS 389
             +      + +T+ GH   +  L ++
Sbjct: 322 NFYELGHDEVLKTISGHNKGITALTVN 348

>pdb|1PGU|A Chain A, Yeast Actin Interacting Protein 1 (aip1), Se-met Protein, Monoclinic Crystal Form Length = 615

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQ--LINCVEFSPD-GRIIASASFDKSIKLWDGRIGK 493
           DD ++  +     K S +  T H+Q   +  VEFSPD G  + +   D+ I  +DG+ G+
Sbjct: 181 DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240
Query: 494 FITTLRGHVQ----AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ 538
           F+  +    +     ++ ++W  DS+   +  AD+T++VW++ T K  Q
Sbjct: 241 FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288

>pdb|4GQB|B Chain B, Crystal Structure Of The Human Prmt5:mep50 Complex Length = 344

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
           H + V +V    +G    SGS D  ++ WD+  Q  L     H   V C+A SP    + 
Sbjct: 126 HDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVF 185
Query: 266 SGC-KNGVIHAWDSSTGK---QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
             C ++  I  WD+   K   QIG    G+    T+L+W P     Q   F    ++G +
Sbjct: 186 LSCSEDNRILLWDTRCPKPASQIGCSAPGYLP--TSLAWHP----QQSEVFVFGDENGTV 239
Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYS 355
            + D   + CV     H++ VT       GL++S
Sbjct: 240 SLVDTKSTSCVLSSAVHSQCVT-------GLVFS 266

>pdb|3BG0|A Chain A, Architecture Of A Coat For The Nuclear Pore Membrane Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSSD- 513
           T H+ +I+  +    G  +A+ S D+S+K++D R G    I  LRGH   V+ VAW+   
Sbjct: 10  TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM 69
Query: 514 -SRLLVSGSADSTLKVWNMKTKKIEQ--DLPGHGDEVYAVDWAPD--GEKVASGGKDKVL 568
              +L S S D  + +W  +    E+  +  GH   V +V WAP   G  +A G  D  +
Sbjct: 70  YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI 129
Query: 569 RL 570
            L
Sbjct: 130 SL 131

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 19/229 (8%)
Query: 353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP--AN 410
           + S S+D T+++W   D  +   +     ++N++   ++  + +           P  A 
Sbjct: 32  VASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTXINGVPLFAT 91
Query: 411 PEESSKHALAKYQAQ-CP---EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--- 463
             E   + L  +Q   C    +   ++SGS D T  +W   KE   +  +  H   +   
Sbjct: 92  SGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVW---KEGSLVYNLQAHNASVWDA 148
Query: 464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLVSGSA 522
             V FS +  + ASA  DK+IKLW     K I T  G H   V  +A   D    +S S 
Sbjct: 149 KVVSFSENKFLTASA--DKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGHF-ISCSN 203
Query: 523 DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           D  +K+ +  T  + +   GH   VY +   P+G+ + S G+D+ +R+W
Sbjct: 204 DGLIKLVDXHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIW 251

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
            K ++ S D T+ LW  +K  K+ + +  H  ++  +    DG  I S S D  IKL D 
Sbjct: 156 NKFLTASADKTIKLWQNDKVIKTFSGI--HNDVVRHLAVVDDGHFI-SCSNDGLIKLVDX 212
Query: 490 RIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYA 549
             G  + T  GH   VY +    +  + VS   D T+++W+ +   ++Q +      +++
Sbjct: 213 HTGDVLRTYEGHESFVYCIKLLPNGDI-VSCGEDRTVRIWSKENGSLKQVITLPAISIWS 271
Query: 550 VDWAPDGEKVASGGKDKVLRLW 571
           VD   +G+ +  G  D ++R++
Sbjct: 272 VDCXSNGDIIV-GSSDNLVRIF 292

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 109/304 (35%), Gaps = 88/304 (28%)
Query: 289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ------CVRVLT------ 336
           R H   I  L  EP     + R   S G DG I ++D+  S       C  V +      
Sbjct: 40  RIHGGGINTLDIEPV----EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHP 95
Query: 337 -SHTRSVTCIRW--GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL 393
             H  SV  ++W    +G+  S+S D+T+KVW                  +T  L T  +
Sbjct: 96  DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVW------------------DTNTLQTADV 137
Query: 394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE--KLVSGSDDFTLFLWNPEKEKK 451
              E T      Y       S+KH L     + P+ +   L SGS    L          
Sbjct: 138 FNFEETV-----YSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL---------- 182
Query: 452 SLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWD-GRIGKFITTLRGHVQAVYMVA 509
                 GH+Q I  V +SP    I+A+AS D  +KLWD  R    + TL  H        
Sbjct: 183 -----QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN------- 230
Query: 510 WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR 569
                                 K++ +E     H  +V  + +  DG  + + G D  +R
Sbjct: 231 --------------------GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270
Query: 570 LWQN 573
           LW +
Sbjct: 271 LWNS 274

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 47/77 (61%)
Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
           ++TGH++ +  V+++ +G ++ S S D S  +W    G+ + TL GH   ++ +     +
Sbjct: 27  KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFT 86
Query: 515 RLLVSGSADSTLKVWNM 531
           +  V+GSAD ++K+W++
Sbjct: 87  KYCVTGSADYSIKLWDV 103

>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The Eed-Ezh2 Polycomb Complex Length = 402

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPD 555
           GH  A+  + +   D  LL+S S D  L++WN++T     I   + GH DEV + D+   
Sbjct: 149 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 208
Query: 556 GEKVASGGKDKVLRLWQ 572
           GEK+ S G D  L+LW+
Sbjct: 209 GEKIMSCGMDHSLKLWR 225

>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H1k26 Peptide Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPD 555
           GH  A+  + +   D  LL+S S D  L++WN++T     I   + GH DEV + D+   
Sbjct: 112 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 171
Query: 556 GEKVASGGKDKVLRLWQ 572
           GEK+ S G D  L+LW+
Sbjct: 172 GEKIMSCGMDHSLKLWR 188

>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated Histone H3k27 Peptide Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPD 555
           GH  A+  + +   D  LL+S S D  L++WN++T     I   + GH DEV + D+   
Sbjct: 112 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 171
Query: 556 GEKVASGGKDKVLRLWQ 572
           GEK+ S G D  L+LW+
Sbjct: 172 GEKIMSCGMDHSLKLWR 188

>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form Length = 366

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPD 555
           GH  A+  + +   D  LL+S S D  L++WN++T     I   + GH DEV + D+   
Sbjct: 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172
Query: 556 GEKVASGGKDKVLRLWQ 572
           GEK+ S G D  L+LW+
Sbjct: 173 GEKIMSCGMDHSLKLWR 189

>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed Length = 361

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 500 GHVQAVYMVAWS-SDSRLLVSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPD 555
           GH  A+  + +   D  LL+S S D  L++WN++T     I   + GH DEV + D+   
Sbjct: 108 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 167
Query: 556 GEKVASGGKDKVLRLWQ 572
           GEK+ S G D  L+LW+
Sbjct: 168 GEKIMSCGMDHSLKLWR 184

>pdb|3MMY|A Chain A, Structural And Functional Analysis Of The Interaction Between The Nucleoporin Nup98 And The Mrna Export Factor Rae1 Length = 368

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Query: 463 INCVEFSPD---GRIIASASFDKSIKLWDGR-IGKFITTLRG-HVQAVYMVAWSSDSRLL 517
           I C+ FSP    G  + + S+   ++ W+ +  G+ I   +  H   V  V WS D   +
Sbjct: 42  IGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKV 101
Query: 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW--APDGEKVASGGKDKVLRLW 571
            + S D T K+W++ + +  Q +  H   V  + W  AP+   V +G  DK L+ W
Sbjct: 102 FTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR 366
           Q RRF     +G I++ D   +    +  +H   +T +++  SG  + S+SQD  +K+W 
Sbjct: 105 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWS 164
Query: 367 ASDGVMCRTLEGHAHWVNTLAL 388
             DG   RTL GH   V  +A+
Sbjct: 165 VKDGSNPRTLIGHRATVTDIAI 186

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
           P GE L+S S D  L +W+  K+  +   + GH+  +  +     GR + SAS D +I+L
Sbjct: 146 PSGEALISSSQDMQLKIWSV-KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 204
Query: 487 WDGRIGKFITTLR 499
           W+   G  I T  
Sbjct: 205 WECGTGTTIHTFN 217

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR 366
           Q RRF     +G I++ D   +    +  +H   +T +++  SG  + S+SQD  +K+W 
Sbjct: 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWS 167
Query: 367 ASDGVMCRTLEGHAHWVNTLAL 388
             DG   RTL GH   V  +A+
Sbjct: 168 VKDGSNPRTLIGHRATVTDIAI 189

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
           P GE L+S S D  L +W+  K+  +   + GH+  +  +     GR + SAS D +I+L
Sbjct: 149 PSGEALISSSQDMQLKIWSV-KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207
Query: 487 WDGRIGKFITTLR 499
           W+   G  I T  
Sbjct: 208 WECGTGTTIHTFN 220

>pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/310 (19%), Positives = 110/310 (35%), Gaps = 62/310 (20%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--KCEGHKHWVLCIAWS-PDS 261
            H E +        G+ LA+ S D T++ ++V  +T        GH+  V  + W+ P  
Sbjct: 7   AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKF 66
Query: 262 KQLVSGCK-NGVIHAWDSSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDG 319
             +++ C  +G +  W    G+     +   H   + ++ W P          +S GK  
Sbjct: 67  GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL--------------IYSASQDRTIKVW 365
            +   +   +  + ++ +H   V    W  + +                +   D  +K+W
Sbjct: 127 VVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185
Query: 366 R----ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +    A   V+  TLEGH+ WV  +A S   L+R                          
Sbjct: 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-------------------------- 219
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKE----KKSLARMTGHQQLINCVEFSPDGRIIAS 477
                     L S S D T  +W  + E    KK+L +      ++    +S  G ++A 
Sbjct: 220 --------SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271
Query: 478 ASFDKSIKLW 487
           +  D  + LW
Sbjct: 272 SGGDNKVTLW 281

>pdb|3JRO|A Chain A, Nup84-Nup145c-Sec13 Edge Element Of The Npc Lattice Length = 753

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSDS 514
             H +LI+       G+ +A+ S DK+IK+++  G   K I TL GH   V+ V W+   
Sbjct: 6   NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK 65
Query: 515 --RLLVSGSADSTLKVWNMKTKKIEQDL--PGHGDEVYAVDWAP 554
              +L S S D  + +W  +  +  Q      H   V +V WAP
Sbjct: 66  FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109

>pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/310 (19%), Positives = 111/310 (35%), Gaps = 62/310 (20%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWS-PDS 261
            H E +        G+ LA+ S D T++ ++V  +T   +    GH+  V  + W+ P  
Sbjct: 9   AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKF 68
Query: 262 KQLVSGCK-NGVIHAWDSSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDG 319
             +++ C  +G +  W    G+     +   H   + ++ W P          +S GK  
Sbjct: 69  GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 128
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL--------------IYSASQDRTIKVW 365
            +   +   +  + ++ +H   V    W  + +                +   D  +K+W
Sbjct: 129 VVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 187
Query: 366 R----ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +    A   V+  TLEGH+ WV  +A S   L+R                          
Sbjct: 188 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-------------------------- 221
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKE----KKSLARMTGHQQLINCVEFSPDGRIIAS 477
                     L S S D T  +W  + E    KK+L +      ++    +S  G ++A 
Sbjct: 222 --------SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 273
Query: 478 ASFDKSIKLW 487
           +  D  + LW
Sbjct: 274 SGGDNKVTLW 283

>pdb|3JRP|A Chain A, Sec13 With Nup145c (Aa109-179) Insertion Blade Length = 379

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSD- 513
             H +LI+       G+ +A+ S DK+IK+++  G   K I TL GH   V+ V W+   
Sbjct: 8   NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK 67
Query: 514 -SRLLVSGSADSTLKVWNMKTKKIEQDL--PGHGDEVYAVDWAP 554
              +L S S D  + +W  +  +  Q      H   V +V WAP
Sbjct: 68  FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 111

>pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/310 (19%), Positives = 110/310 (35%), Gaps = 62/310 (20%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--KCEGHKHWVLCIAWS-PDS 261
            H E +        G+ LA+ S D T++ ++V  +T        GH+  V  + W+ P  
Sbjct: 7   AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKF 66
Query: 262 KQLVSGCK-NGVIHAWDSSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDG 319
             +++ C  +G +  W    G+     +   H   + ++ W P          +S GK  
Sbjct: 67  GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL--------------IYSASQDRTIKVW 365
            +   +   +  + ++ +H   V    W  + +                +   D  +K+W
Sbjct: 127 VVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185
Query: 366 R----ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +    A   V+  TLEGH+ WV  +A S   L+R                          
Sbjct: 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-------------------------- 219
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKE----KKSLARMTGHQQLINCVEFSPDGRIIAS 477
                     L S S D T  +W  + E    KK+L +      ++    +S  G ++A 
Sbjct: 220 --------SYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271
Query: 478 ASFDKSIKLW 487
           +  D  + LW
Sbjct: 272 SGGDNKVTLW 281

>pdb|2PM6|B Chain B, Crystal Structure Of Yeast Sec1331 EDGE ELEMENT OF THE Copii Vesicular Coat, Native Version Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSD- 513
             H +LI+       G+ +A+ S DK+IK+++  G   K I TL GH   V+ V W+   
Sbjct: 6   NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK 65
Query: 514 -SRLLVSGSADSTLKVWNMKTKKIEQDL--PGHGDEVYAVDWAP 554
              +L S S D  + +W  +  +  Q      H   V +V WAP
Sbjct: 66  FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP 109

>pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/310 (18%), Positives = 110/310 (35%), Gaps = 62/310 (20%)
Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--KCEGHKHWVLCIAWS-PDS 261
            H E +        G+ +A+ S D T++ ++V  +T        GH+  V  + W+ P  
Sbjct: 7   AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKF 66
Query: 262 KQLVSGCK-NGVIHAWDSSTGKQIGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDG 319
             +++ C  +G +  W    G+     +   H   + ++ W P          +S GK  
Sbjct: 67  GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126
Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL--------------IYSASQDRTIKVW 365
            +   +   +  + ++ +H   V    W  + +                +   D  +K+W
Sbjct: 127 VVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIW 185
Query: 366 R----ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK 421
           +    A   V+  TLEGH+ WV  +A S   L+R                          
Sbjct: 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR-------------------------- 219
Query: 422 YQAQCPEGEKLVSGSDDFTLFLWNPEKE----KKSLARMTGHQQLINCVEFSPDGRIIAS 477
                     + S S D T  +W  + E    KK+L +      ++    +S  G ++A 
Sbjct: 220 --------SYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271
Query: 478 ASFDKSIKLW 487
           +  D  + LW
Sbjct: 272 SGGDNKVTLW 281

>pdb|2PM9|B Chain B, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE Copii Vesicular Coat Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWD--GRIGKFITTLRGHVQAVYMVAWSSD- 513
             H ++I+       G+ +A+ S DK+IK+++  G   K I TL GH   V+ V W+   
Sbjct: 6   NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK 65
Query: 514 -SRLLVSGSADSTLKVWNMKTKKIEQDL--PGHGDEVYAVDWAP 554
              +L S S D  + +W  +  +  Q      H   V +V WAP
Sbjct: 66  FGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAP 109

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	573
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1k32_A	1045	Tricorn protease; protein degradation, substrate g	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	99.98
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.98
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.97
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.93
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.92
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.92
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.92
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.91
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.91
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.91
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.91
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.9
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.9
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.89
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.89
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.89
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.88
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.88
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.88
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.86
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.85
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.85
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.85
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.85
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.84
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.84
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.84
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.82
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.82
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.81
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.8
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.79
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.79
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.77
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.76
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.76
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.75
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.75
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.74
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.74
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.72
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.72
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.72
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.7
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.7
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.7
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.68
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.67
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.67
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.66
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.65
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.63
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.63
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.6
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.59
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.58
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.58
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.57
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.57
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.57
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.56
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.56
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.56
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.54
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.54
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.51
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.5
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.47
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.47
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.44
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.44
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.41
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.37
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.36
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.36
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.35
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.34
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.32
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.3
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.29
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.29
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.28
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.28
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.28
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.23
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.22
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.22
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.2
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.17
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.15
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.13
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.13
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.12
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.11
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.07
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.06
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.03
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.01
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.01
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.01
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.91
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.86
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.85
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.72
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.71
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.7
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.65
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.64
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.61
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.54
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.54
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.52
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.48
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.45
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.4
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.39
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.38
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.38
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.35
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.35
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.34
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.32
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.3
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.3
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.29
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.26
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.25
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.22
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.16
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.14
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.13
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.05
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.01
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.0
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.95
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.87
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.78
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.76
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.75
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.71
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.69
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.64
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.58
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.44
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.37
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.35
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.35
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.35
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.24
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.18
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.17
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.14
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.12
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.12
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	97.08
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	96.92
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.88
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	96.75
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	96.74
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	96.74
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.7
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	96.68
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.47
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	96.3
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.29
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.23
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.17
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	95.84
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	95.82
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	95.74
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.49
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	95.24
3kya_A	496	Putative phosphatase; structural genomics, joint c	94.9
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	94.68
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	94.54
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	94.41
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	93.95
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	93.94
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	93.73
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	93.7
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	93.67
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	93.54
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	93.24
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	93.19
3ott_A	758	Two-component system sensor histidine kinase; beta	93.07
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	92.92
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	92.64
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	92.51
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	91.38
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	90.89
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	90.74
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	90.61
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	90.07
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	90.05
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	89.07
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	88.86
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	88.65
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	87.68
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	87.62
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	87.43
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	86.03
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	85.9
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	83.97
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	82.54
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	81.96
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	81.42
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	80.92

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=6.9e-60  Score=501.06  Aligned_cols=450  Identities=21%  Similarity=0.313  Sum_probs=346.4

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCccee--eecCCCe-eeeecccccccccccccCCCCCCcc
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--KCEGTPY-LFYVNETEITKTLADVLPLDTLNTE  178 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  178 (573)
                      ....+.||.++|++++|+|+|++||||+.|++|||||+.+++...  ...++.. +....               ..+.+
T Consensus        51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~---------------fs~dg  115 (611)
T 1nr0_A           51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDIS---------------WDSES  115 (611)
T ss_dssp             CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEE---------------ECTTS
T ss_pred             cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEE---------------ECCCC
Confidence            445678999999999999999999999999999999997654321  2221110 00000               00111


Q ss_pred             ceEEEEEec-e--eeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEE
Q psy2671         179 EVVDIVYQK-Q--AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC  254 (573)
Q Consensus       179 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~  254 (573)
                      ..+...... .  ....+.....+...+.||.+.|.+++|+|++. .|++|+.|++|++||..+++.+..+.+|...|.+
T Consensus       116 ~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~  195 (611)
T 1nr0_A          116 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS  195 (611)
T ss_dssp             CEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred             CEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEE
Confidence            111111100 0  11222223445567899999999999999987 5999999999999999999888999999999999


Q ss_pred             EEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       255 v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      ++|+|||++|++|+.|++|++||..+++.+.....      +|...|.+++|.|     ++++|++++.|++|++||+.+
T Consensus       196 v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-----dg~~l~s~s~D~~v~lWd~~~  270 (611)
T 1nr0_A          196 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-----DGTKIASASADKTIKIWNVAT  270 (611)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTT
T ss_pred             EEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-----CCCEEEEEeCCCeEEEEeCCC
Confidence            99999999999999999999999998876543222      8999999999987     678999999999999999987


Q ss_pred             CeEEE-------------------------------------------EecCCCccEEEEEECCCc-EEEEEeCCCeEEE
Q psy2671         329 SQCVR-------------------------------------------VLTSHTRSVTCIRWGGSG-LIYSASQDRTIKV  364 (573)
Q Consensus       329 ~~~~~-------------------------------------------~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~v  364 (573)
                      +++..                                           .+.+|...|.+++|++++ .+++++.|++|++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~  350 (611)
T 1nr0_A          271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS  350 (611)
T ss_dssp             TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence            65443                                           345799999999999887 7999999999999


Q ss_pred             EeCCCCeeeEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh------------------------------
Q psy2671         365 WRASDGVMCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE------------------------------  413 (573)
Q Consensus       365 w~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------------------------------  413 (573)
                      ||+.++.....+ .+|...+..++++++..+...........|+......                              
T Consensus       351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~  430 (611)
T 1nr0_A          351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC  430 (611)
T ss_dssp             EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred             EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence            999998877665 6788999999988765444332221111121110000                              


Q ss_pred             ---------h-----hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee
Q psy2671         414 ---------S-----SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS  479 (573)
Q Consensus       414 ---------~-----~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s  479 (573)
                               .     .........+++|+|.++++|+.|++|++||+...........+|...|++|+|+|||++||+++
T Consensus       431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s  510 (611)
T 1nr0_A          431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATD  510 (611)
T ss_dssp             SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEc
Confidence                     0     00000112345799999999999999999998765322222367999999999999999999999


Q ss_pred             CCCcEEEEeCCC-CeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc-cc-ccccCc-CCCEEEEEEc
Q psy2671         480 FDKSIKLWDGRI-GKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK-IE-QDLPGH-GDEVYAVDWA  553 (573)
Q Consensus       480 ~dg~i~lwd~~~-~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~-~~-~~l~~h-~~~v~~~~~s  553 (573)
                      .|++|++||..+ ++.+..  +.+|...|++++|+|||++||+|+.|++|++||+.++. .. ..+.+| .+.|++++|+
T Consensus       511 ~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs  590 (611)
T 1nr0_A          511 QSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL  590 (611)
T ss_dssp             TTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE
T ss_pred             CCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEc
Confidence            999999999987 665544  34599999999999999999999999999999998765 33 567899 8999999999


Q ss_pred             cCCCEEEEeeCCCcEEEcc
Q psy2671         554 PDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       554 ~d~~~l~s~~~d~~i~iw~  572 (573)
                      ||++ |+++|.|++|++|+
T Consensus       591 ~d~~-l~s~~~D~~i~lW~  608 (611)
T 1nr0_A          591 NETT-IVSAGQDSNIKFWN  608 (611)
T ss_dssp             ETTE-EEEEETTSCEEEEE
T ss_pred             CCCE-EEEecCCCCEEEEe
Confidence            9998 99999999999997

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=4.2e-54  Score=455.03  Aligned_cols=360  Identities=34%  Similarity=0.580  Sum_probs=308.4

Q ss_pred             cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                      +...+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.|++++.|+.|++|+.
T Consensus       213 ~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~  291 (577)
T 2ymu_A          213 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR  291 (577)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence            34456789999999999999999999999999999996 45677888999999999999999999999999999999997


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS  357 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s  357 (573)
                      .. +. ...+.+|...|.+++|.|     +++.+++++.|++|++||... .....+.+|...+.+++|++++ .+++++
T Consensus       292 ~~-~~-~~~~~~h~~~v~~~~~~~-----~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~  363 (577)
T 2ymu_A          292 NG-QL-LQTLTGHSSSVWGVAFSP-----DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASAS  363 (577)
T ss_dssp             TS-CE-EEEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CC-cE-EEEEecCCCCeEEEEECC-----CCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence            53 33 245678999999999876     568999999999999999754 4567788999999999999887 789999


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchh--hhhhh-hhheeeeCCCCcEEE
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEE--SSKHA-LAKYQAQCPEGEKLV  433 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~l~  433 (573)
                      .|+.+++|+. ++.....+.+|...|..++++++....+....++.+. |+......  ...+. ......++|++.+++
T Consensus       364 ~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~  442 (577)
T 2ymu_A          364 DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIA  442 (577)
T ss_dssp             TTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred             CCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence            9999999995 5677888999999999999999887666665555543 43221110  00011 111234679999999


Q ss_pred             EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671         434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                      +++.|+++++||...  ..+..+.+|...|++++|+|++++||+++.|+.|++||. +++.+..+.+|...|++++|+||
T Consensus       443 ~~~~d~~v~~w~~~~--~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~d  519 (577)
T 2ymu_A          443 SASDDKTVKLWNRNG--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPD  519 (577)
T ss_dssp             EEETTSEEEEEETTS--CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTT
T ss_pred             EEcCCCEEEEEECCC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCC
Confidence            999999999999643  456778899999999999999999999999999999994 68889999999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |++||+++.|+.|++||. +++.+..+.+|.+.|++++|+||+++|+|+|.|++|++|+
T Consensus       520 g~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd  577 (577)
T 2ymu_A          520 GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN  577 (577)
T ss_dssp             SSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             CCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence            999999999999999996 6778888999999999999999999999999999999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.3e-54  Score=458.67  Aligned_cols=401  Identities=21%  Similarity=0.298  Sum_probs=325.4

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      .+.+.+.+++|+|||++||+++ +++|+|||+.++...                                          
T Consensus        16 ~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~------------------------------------------   52 (611)
T 1nr0_A           16 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDT------------------------------------------   52 (611)
T ss_dssp             CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCC------------------------------------------
T ss_pred             cccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccC------------------------------------------
Confidence            3677888999999999999998 569999999765432                                          


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                                   ..+.||.+.|++++|+|+|++||+|+.|++|+|||+.+++  ....+.+|...|.+++|+|||++|+
T Consensus        53 -------------~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~  119 (611)
T 1nr0_A           53 -------------EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIA  119 (611)
T ss_dssp             -------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEE
T ss_pred             -------------eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEE
Confidence                         2356899999999999999999999999999999987543  3457789999999999999999999


Q ss_pred             EEeeC----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         266 SGCKN----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       266 sgs~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      +++.+    +.|++||.  +... ..+.+|...|.+++|.|..    ..+|++++.|++|++||....++...+.+|...
T Consensus       120 ~~~~~~~~~~~v~~wd~--~~~~-~~l~gh~~~v~~v~f~p~~----~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~  192 (611)
T 1nr0_A          120 AVGEGRERFGHVFLFDT--GTSN-GNLTGQARAMNSVDFKPSR----PFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF  192 (611)
T ss_dssp             EEECCSSCSEEEEETTT--CCBC-BCCCCCSSCEEEEEECSSS----SCEEEEEETTSCEEEEETTTBEEEEEECCCSSC
T ss_pred             EEECCCCceeEEEEeeC--CCCc-ceecCCCCCceEEEECCCC----CeEEEEEeCCCeEEEEECCCCeEeeeeccccCc
Confidence            98875    47888874  4433 4578999999999998731    236999999999999999999999999999999


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-------CCcceeeEEEeccCceeEEEEcCCCcee-eCCCCch
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-------GHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPE  412 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~  412 (573)
                      |.+++|++++ .+++++.|++|++|+..++.....+.       +|...|.+++++++....+....++.++ |+.....
T Consensus       193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~  272 (611)
T 1nr0_A          193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK  272 (611)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred             eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence            9999999987 79999999999999999998887774       7999999999999887666665555443 3332110


Q ss_pred             hhh----------------------------------------------hh-hhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         413 ESS----------------------------------------------KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       413 ~~~----------------------------------------------~~-~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      ...                                              .| ......+++|++.+|++++.|++|++||
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd  352 (611)
T 1nr0_A          273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD  352 (611)
T ss_dssp             EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence            000                                              00 0011123578999999999999999999


Q ss_pred             CCCCccceee----------------------------------------------------------------------
Q psy2671         446 PEKEKKSLAR----------------------------------------------------------------------  455 (573)
Q Consensus       446 ~~~~~~~~~~----------------------------------------------------------------------  455 (573)
                      +.++......                                                                      
T Consensus       353 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~  432 (611)
T 1nr0_A          353 ISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK  432 (611)
T ss_dssp             TTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESS
T ss_pred             CCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCc
Confidence            7653210000                                                                      


Q ss_pred             -----------eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeC
Q psy2671         456 -----------MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       456 -----------~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~  522 (573)
                                 ...|...+.+++|+|||++||+|+.|++|++||...++.  +.. .+|...|++++|||||++||+++.
T Consensus       433 ~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~  511 (611)
T 1nr0_A          433 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQ  511 (611)
T ss_dssp             EEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEET
T ss_pred             eEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcC
Confidence                       001234578999999999999999999999999887653  233 679999999999999999999999


Q ss_pred             CCcEEEEeCCc-cccccc--ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         523 DSTLKVWNMKT-KKIEQD--LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       523 D~~v~vwd~~~-~~~~~~--l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |++|++|++.+ +++...  +.+|...|++++|+|||++|+++|.|++|++|+
T Consensus       512 d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~  564 (611)
T 1nr0_A          512 SRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN  564 (611)
T ss_dssp             TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEE
Confidence            99999999987 555543  345999999999999999999999999999997

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1e-53  Score=452.15  Aligned_cols=398  Identities=34%  Similarity=0.599  Sum_probs=333.5

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .|.||+++|++|+|||||++||||+.|++|+|||. +++++                                       
T Consensus        11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~---------------------------------------   50 (577)
T 2ymu_A           11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL---------------------------------------   50 (577)
T ss_dssp             EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE---------------------------------------
T ss_pred             EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEE---------------------------------------
Confidence            57899999999999999999999999999999995 34322                                       


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                      .++.||.+.|++++|+|||++||+++.|++|+|||+ +++.+..+.+|...|.+++|+||+++|
T Consensus        51 ----------------~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l  113 (577)
T 2ymu_A           51 ----------------QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTI  113 (577)
T ss_dssp             ----------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             ----------------EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEE
Confidence                            234589999999999999999999999999999996 567888999999999999999999999


Q ss_pred             EEEeeCCeEEEEECCCCceecccccC-----------------------------------------CcccEEEEEeccc
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRG-----------------------------------------HKQWITALSWEPF  303 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~-----------------------------------------h~~~v~~~~~~~~  303 (573)
                      ++++.|+.+++|+.......  ...+                                         |...|..+.+.  
T Consensus       114 ~~~~~d~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--  189 (577)
T 2ymu_A          114 ASASDDKTVKLWNRNGQLLQ--TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFS--  189 (577)
T ss_dssp             EEEETTSCEEEEETTCCEEE--EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEEC--
T ss_pred             EEEcCCCceeecccccceee--eccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeec--
Confidence            99999999999997643221  1222                                         33334444443  


Q ss_pred             ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcce
Q psy2671         304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHW  382 (573)
Q Consensus       304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~  382 (573)
                         ++++++++++.|+.|++||. .++....+.+|...|.+++|++++ .+++++.|+.|++|+. ++..+..+.+|...
T Consensus       190 ---~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~  264 (577)
T 2ymu_A          190 ---PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS  264 (577)
T ss_dssp             ---TTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSC
T ss_pred             ---CCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCC
Confidence               35678999999999999995 567788899999999999999887 6999999999999996 46778889999999


Q ss_pred             eeEEEeccCceeEEEEcCCCcee-eCCCCchhh--hhhh-hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFK-YDPANPEES--SKHA-LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~-~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                      |..++++++....+....++.+. |+.......  ..+. .......+|++..+++++.|+++++||....  .+..+.+
T Consensus       265 v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~--~~~~~~~  342 (577)
T 2ymu_A          265 VNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ--HLQTLTG  342 (577)
T ss_dssp             EEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC--EEEEECC
T ss_pred             EEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC--eeEEEeC
Confidence            99999999887666665555543 332211100  0011 1112345789999999999999999997643  3566788


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~  538 (573)
                      |...|.+++|+|+|++|++|+.||.|++||. +++.+..+.+|...|.+++|+|||++|++++.|+.|++||. +++.+.
T Consensus       343 ~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~  420 (577)
T 2ymu_A          343 HSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ  420 (577)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEE
Confidence            9999999999999999999999999999994 67888899999999999999999999999999999999996 566778


Q ss_pred             cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       539 ~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+.+|...|++++|+||+++|++++.|++|++|+
T Consensus       421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~  454 (577)
T 2ymu_A          421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN  454 (577)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            8899999999999999999999999999999996

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-51  Score=450.14  Aligned_cols=402  Identities=12%  Similarity=0.151  Sum_probs=316.2

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      .||.+.|++++|+|++++||+|+.||+|+|||..++.++.                                        
T Consensus        14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~----------------------------------------   53 (902)
T 2oaj_A           14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI----------------------------------------   53 (902)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE----------------------------------------
T ss_pred             cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE----------------------------------------
Confidence            3799999999999999999999999999999986543221                                        


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s  266 (573)
                                      ...|...|.+++|+| |++|++++.|++|+|||+.+++.+..+. |...|++++|+|++++|++
T Consensus        54 ----------------~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~s  115 (902)
T 2oaj_A           54 ----------------KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLI  115 (902)
T ss_dssp             ----------------ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEE
T ss_pred             ----------------EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEE
Confidence                            113678999999999 8899999999999999999998887775 6678999999999999999


Q ss_pred             EeeCCeEEEEECCCCceec----------ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671         267 GCKNGVIHAWDSSTGKQIG----------QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  336 (573)
                      |+.||.|++||+++++...          ....+|...|.+++|.|.    +...+++++.||.| +||+..+++.+.+.
T Consensus       116 gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~----~~~~l~~g~~dg~v-lWd~~~~~~~~~~~  190 (902)
T 2oaj_A          116 GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR----DIGTVLISYEYVTL-TYSLVENEIKQSFI  190 (902)
T ss_dssp             EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT----EEEEEEEECSSCEE-EEETTTTEEEEEEC
T ss_pred             EcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC----CCCEEEEEeCCCcE-EEECCCCceEEEEe
Confidence            9999999999999876431          235789999999999883    23578999999999 99999999888877


Q ss_pred             CC------------------CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEe--c---cC-------------C
Q psy2671         337 SH------------------TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRT--L---EG-------------H  379 (573)
Q Consensus       337 ~h------------------~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~--~---~~-------------~  379 (573)
                      .|                  ...|.+++|++++ .+++++.|++|++||+++++.+..  +   .+             |
T Consensus       191 ~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~  270 (902)
T 2oaj_A          191 YELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTN  270 (902)
T ss_dssp             CCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSC
T ss_pred             cccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccc
Confidence            65                  5779999999987 799999999999999998876543  2   12             3


Q ss_pred             cceeeEEEec----cCc-e-eEEEEcCCC----ce-e-------------------------------------------
Q psy2671         380 AHWVNTLALS----TDY-L-MRVEATSTG----GF-K-------------------------------------------  405 (573)
Q Consensus       380 ~~~v~~~~~s----~~~-~-~~~~~~~~~----~~-~-------------------------------------------  405 (573)
                      ...|..++++    ++. . +........    .+ .                                           
T Consensus       271 ~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  350 (902)
T 2oaj_A          271 AAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILP  350 (902)
T ss_dssp             CCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEE
T ss_pred             cCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEE
Confidence            4468888884    321 1 111111100    00 0                                           


Q ss_pred             ----------------------------eCCCCchhhhh----h-hhh--------------------------------
Q psy2671         406 ----------------------------YDPANPEESSK----H-ALA--------------------------------  420 (573)
Q Consensus       406 ----------------------------~~~~~~~~~~~----~-~~~--------------------------------  420 (573)
                                                  |+.........    + .+.                                
T Consensus       351 ~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~  430 (902)
T 2oaj_A          351 IPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYL  430 (902)
T ss_dssp             CCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCS
T ss_pred             CCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCc
Confidence                                        00000000000    0 000                                


Q ss_pred             --------heeeeCCCCcEEEEEeCCCeEEEEcCCCCccc----ee-eec-----cccccEEEEEECCCCCEEEEeeCCC
Q psy2671         421 --------KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS----LA-RMT-----GHQQLINCVEFSPDGRIIASASFDK  482 (573)
Q Consensus       421 --------~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~----~~-~~~-----~h~~~v~~v~~sp~g~~las~s~dg  482 (573)
                              ...+++|++.+|++|+.|++|++||+.++...    +. .+.     +|...|.+|+|+|||++||+|+.||
T Consensus       431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg  510 (902)
T 2oaj_A          431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG  510 (902)
T ss_dssp             CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS
T ss_pred             ccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc
Confidence                    00112477889999999999999998765321    11 111     7889999999999999999999999


Q ss_pred             cEEEEeCCCC---------------------------------------------eEEEeecCCcceEEEEEECCCCCEE
Q psy2671         483 SIKLWDGRIG---------------------------------------------KFITTLRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       483 ~i~lwd~~~~---------------------------------------------~~~~~~~~h~~~v~~v~~s~dg~~l  517 (573)
                      +|+|||..++                                             +++..+.+|...|++++||||| +|
T Consensus       511 tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~l  589 (902)
T 2oaj_A          511 DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FV  589 (902)
T ss_dssp             CEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EE
T ss_pred             EEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EE
Confidence            9999998765                                             2467788999999999999999 99


Q ss_pred             EEEeCCCcEEEEeCCccccc-----cccc-CcCCCEEEEEEc-----cCC---CEEEEeeCCCcEEEcc
Q psy2671         518 VSGSADSTLKVWNMKTKKIE-----QDLP-GHGDEVYAVDWA-----PDG---EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~-----~~l~-~h~~~v~~~~~s-----~d~---~~l~s~~~d~~i~iw~  572 (573)
                      |+|+.|++|+|||+++...+     ..+. +|.+.|++++|+     |||   ++|++|+.|++|++|+
T Consensus       590 Asgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd  658 (902)
T 2oaj_A          590 GIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK  658 (902)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred             EEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence            99999999999999887654     3454 999999999999     885   8999999999999997

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=4.5e-50  Score=427.33  Aligned_cols=445  Identities=20%  Similarity=0.308  Sum_probs=346.2

Q ss_pred             ccccCCCcccc-EEEEEEcC--CCCeeEEeeCCCcEEEeeccCC--------cceeeecCCCe-eeeecccccccccccc
Q psy2671         102 CTSSMPGHAEA-VISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--------TPLFKCEGTPY-LFYVNETEITKTLADV  169 (573)
Q Consensus       102 ~~~~~~gH~~~-V~~l~~s~--~~~~lat~s~D~~vrvWd~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~~~  169 (573)
                      ....+.+|.+. |.+++|+|  ++++||+|+.||+|+|||+.++        ..+.....+.. +...            
T Consensus        55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~------------  122 (615)
T 1pgu_A           55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI------------  122 (615)
T ss_dssp             SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEE------------
T ss_pred             cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEE------------
Confidence            44567899999 99999999  9999999999999999999755        22222221110 0000            


Q ss_pred             cCCCCCCccceEEEEEece---eeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEECCCCeeeEEe
Q psy2671         170 LPLDTLNTEEVVDIVYQKQ---AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKC  245 (573)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~~~~~~~~~~  245 (573)
                         ...+.+..+.......   ....+....++...+.+|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+
T Consensus       123 ---~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~  199 (615)
T 1pgu_A          123 ---SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD  199 (615)
T ss_dssp             ---EECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE
T ss_pred             ---EEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee
Confidence               0001111111111110   11112223334456789999999999999998 7999999999999999999999999


Q ss_pred             cCCCC---cEEEEEEcCC-CCeEEEEeeCCeEEEEECCCCceeccccc---CCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         246 EGHKH---WVLCIAWSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQPMR---GHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       246 ~~h~~---~V~~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      .+|..   .|.+++|+|+ +++|++++.||.|++||+.+++.+.....   +|...|.++.|.      +++++++++.|
T Consensus       200 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~l~~~~~d  273 (615)
T 1pgu_A          200 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL------DSQKFATVGAD  273 (615)
T ss_dssp             CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES------SSSEEEEEETT
T ss_pred             cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc------CCCEEEEEcCC
Confidence            99999   9999999999 99999999999999999999887654435   899999999985      45789999999


Q ss_pred             CcEEEEECCCCeEEEEecCC----CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCcee
Q psy2671         319 GAIRIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  394 (573)
                      |.|++||+.+++.+..+..+    ...+.++.|+....+++++.|+.|++|++.++.....+.+|...|..+++ ++  +
T Consensus       274 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l  350 (615)
T 1pgu_A          274 ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--L  350 (615)
T ss_dssp             SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--T
T ss_pred             CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--c
Confidence            99999999999988888776    46788888876678999999999999999999888899999888888888 55  2


Q ss_pred             EEEEcCCCcee-eCCC------------------------------------Cchh-------------------h----
Q psy2671         395 RVEATSTGGFK-YDPA------------------------------------NPEE-------------------S----  414 (573)
Q Consensus       395 ~~~~~~~~~~~-~~~~------------------------------------~~~~-------------------~----  414 (573)
                      .... .++.+. |+..                                    ....                   .    
T Consensus       351 ~~~~-~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  429 (615)
T 1pgu_A          351 ISGS-YDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL  429 (615)
T ss_dssp             EEEE-TTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEE
T ss_pred             EEEC-CCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCce
Confidence            1111 111111 1100                                    0000                   0    


Q ss_pred             ------hhhhh------hheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         415 ------SKHAL------AKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       415 ------~~~~~------~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                            .....      .........+.++++++. |+.+++||+.+.......+.+|...|.+++|+|+|++|++++.|
T Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d  509 (615)
T 1pgu_A          430 LILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVM  509 (615)
T ss_dssp             EEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCC
Confidence                  00000      000000011778899999 99999999876533225667899999999999999999999999


Q ss_pred             CcEEEEeCCCCeEEEeecC-CcceEEEEEECC----------CCCEEEEEeCCCcEEEEeCCcc-cccccccCcCCCEEE
Q psy2671         482 KSIKLWDGRIGKFITTLRG-HVQAVYMVAWSS----------DSRLLVSGSADSTLKVWNMKTK-KIEQDLPGHGDEVYA  549 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~-h~~~v~~v~~s~----------dg~~las~s~D~~v~vwd~~~~-~~~~~l~~h~~~v~~  549 (573)
                      |.|++||..+++.+..+.+ |...|++++|+|          ++++||+++.|+.|++||+.++ +.+..+.+|.+.|++
T Consensus       510 g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~  589 (615)
T 1pgu_A          510 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN  589 (615)
T ss_dssp             SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred             CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEE
Confidence            9999999999999999988 999999999999          9999999999999999999987 778889999999999


Q ss_pred             EEEccCCCEEEEeeCCCcEEEcc
Q psy2671         550 VDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       550 ~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++|+|+++ |++++.|++|++|+
T Consensus       590 l~~s~~~~-l~s~~~d~~v~iw~  611 (615)
T 1pgu_A          590 LLWETPST-LVSSGADACIKRWN  611 (615)
T ss_dssp             EEEEETTE-EEEEETTSCEEEEE
T ss_pred             EEEcCCCC-eEEecCCceEEEEe
Confidence            99999999 99999999999997

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=6.5e-50  Score=460.03  Aligned_cols=406  Identities=23%  Similarity=0.410  Sum_probs=343.0

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|.+.|++++|+|+|++||||+.||+|+|||+.+++++.                                      
T Consensus       610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~--------------------------------------  651 (1249)
T 3sfz_A          610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL--------------------------------------  651 (1249)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--------------------------------------
T ss_pred             EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE--------------------------------------
Confidence            567999999999999999999999999999999998875432                                      


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC--CCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP--DSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~--dg~  262 (573)
                                       .+.+|.+.|.+++|+|+|++||+|+.|++|++||+.+++.+..+.+|...|.+++|+|  ++.
T Consensus       652 -----------------~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  714 (1249)
T 3sfz_A          652 -----------------DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL  714 (1249)
T ss_dssp             -----------------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred             -----------------EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce
Confidence                             2458999999999999999999999999999999999999999999999999999999  455


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-------  335 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------  335 (573)
                      .+++|+.|+.|++||+.+++.. ..+.+|...|.+++|.|     +++.+++++.||+|++||+..++....+       
T Consensus       715 ~l~sg~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~~~~sp-----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~  788 (1249)
T 3sfz_A          715 LLATGSNDFFLKLWDLNQKECR-NTMFGHTNSVNHCRFSP-----DDELLASCSADGTLRLWDVRSANERKSINVKRFFL  788 (1249)
T ss_dssp             EEEEEETTSCEEEEETTSSSEE-EEECCCSSCEEEEEECS-----STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC-
T ss_pred             EEEEEeCCCeEEEEECCCcchh-heecCCCCCEEEEEEec-----CCCEEEEEECCCeEEEEeCCCCcccceeccccccc
Confidence            8999999999999999998765 45678999999999977     5679999999999999998766443322       


Q ss_pred             ------------------------------------------------cCCCccEEEEEECCCc-EEEEEeCCCeEEEEe
Q psy2671         336 ------------------------------------------------TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR  366 (573)
Q Consensus       336 ------------------------------------------------~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~  366 (573)
                                                                      .+|...|.+++|++++ .+++++.|+.|++|+
T Consensus       789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd  868 (1249)
T 3sfz_A          789 SSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWN  868 (1249)
T ss_dssp             -------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEE
T ss_pred             ccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence                                                            2677788999998876 789999999999999


Q ss_pred             CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhh-------------------------------
Q psy2671         367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEES-------------------------------  414 (573)
Q Consensus       367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------------------  414 (573)
                      +.++.....+.+|...|..++++++....+....++.+. |+.......                               
T Consensus       869 ~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  948 (1249)
T 3sfz_A          869 IDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQL  948 (1249)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEE
T ss_pred             cCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEE
Confidence            999999999999999999999999886666665555443 321100000                               


Q ss_pred             ----------hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         415 ----------SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       415 ----------~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                ...........+|++.++++|+.+|.|++|++.+.. ....+.+|...|.+++|+|+|++|++++.||.|
T Consensus       949 ~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~-~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i 1027 (1249)
T 3sfz_A          949 IAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNR-VFSSGVGHKKAVRHIQFTADGKTLISSSEDSVI 1027 (1249)
T ss_dssp             EEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTS-CEEECCCCSSCCCCEEECSSSSCEEEECSSSBE
T ss_pred             EecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCc-eeeecccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence                      000001122457899999999999999999987654 456677899999999999999999999988888


Q ss_pred             EEEeCCCCe----------------------------------------EEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671         485 KLWDGRIGK----------------------------------------FITTLRGHVQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       485 ~lwd~~~~~----------------------------------------~~~~~~~h~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      ++||..+++                                        .+..+.+|...|++++|+||+++|++++.|+
T Consensus      1028 ~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~ 1107 (1249)
T 3sfz_A         1028 QVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK 1107 (1249)
T ss_dssp             EEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS
T ss_pred             EEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC
Confidence            888866543                                        3344556788889999999999999999999


Q ss_pred             cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         525 TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       525 ~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|++||+.+++....+.+|.+.|++++|+||+++|++++.||.|++|+
T Consensus      1108 ~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd 1155 (1249)
T 3sfz_A         1108 TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWN 1155 (1249)
T ss_dssp             CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEE
T ss_pred             cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence            999999999999999999999999999999999999999999999997

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.7e-49  Score=397.85  Aligned_cols=308  Identities=29%  Similarity=0.533  Sum_probs=269.3

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+.||.++|++++|+|++++||||+.|++|+|||+.++.+.                                     
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-------------------------------------  143 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-------------------------------------  143 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------------------------------
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-------------------------------------
Confidence            4567899999999999999999999999999999999877543                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                        ..+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|+++
T Consensus       144 ------------------~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~  205 (410)
T 1vyh_C          144 ------------------RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD  205 (410)
T ss_dssp             ------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred             ------------------EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC
Confidence                              23568999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +|++|+.|++|++||+.++..+ ..+.+|..+|..+.+.|     ++..+++++.|++|++||+.++++...+.+|...|
T Consensus       206 ~l~s~s~D~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v  279 (410)
T 1vyh_C          206 HIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMVRPNQ-----DGTLIASCSNDQTVRVWVVATKECKAELREHRHVV  279 (410)
T ss_dssp             EEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred             EEEEEeCCCeEEEEECCCCcEE-EEEeCCCccEEEEEECC-----CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceE
Confidence            9999999999999999998765 45678999999998765     67899999999999999999998888888999989


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      .+++|++++....                    ..                                             
T Consensus       280 ~~~~~~~~~~~~~--------------------~~---------------------------------------------  294 (410)
T 1vyh_C          280 ECISWAPESSYSS--------------------IS---------------------------------------------  294 (410)
T ss_dssp             EEEEECCSCGGGG--------------------GG---------------------------------------------
T ss_pred             EEEEEcCcccccc--------------------hh---------------------------------------------
Confidence            8888876431000                    00                                             


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                         ...+                                 .......++|.+|++|+.|++|++||.++++.+..+.+|.
T Consensus       295 ---~~~~---------------------------------~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~  338 (410)
T 1vyh_C          295 ---EATG---------------------------------SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD  338 (410)
T ss_dssp             ---GCCS---------------------------------CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             ---hhcc---------------------------------ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence               0000                                 0001122457899999999999999999999999999999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..|.+++|+|+|++|++|+.|++|++||+.+++++..+.+|.+.|++++|+|++++|++||.|++|++|+
T Consensus       339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~  408 (410)
T 1vyh_C          339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  408 (410)
T ss_dssp             SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.8e-48  Score=376.83  Aligned_cols=290  Identities=29%  Similarity=0.488  Sum_probs=239.2

Q ss_pred             ccCCCccccEEEEEEcCC----CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         104 SSMPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~----~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      ..+.+|.++|++++|+|+    +++|||||.|++|||||+.+++...                                 
T Consensus        26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~---------------------------------   72 (321)
T 3ow8_A           26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDL---------------------------------   72 (321)
T ss_dssp             EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEE---------------------------------
T ss_pred             eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeee---------------------------------
Confidence            346789999999999985    5699999999999999987653210                                 


Q ss_pred             eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~  259 (573)
                                          ...+.||...|.+++|+|++..+++++.|++|++||+.+++.+..+..|...+.+++|+|
T Consensus        73 --------------------~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~sp  132 (321)
T 3ow8_A           73 --------------------QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP  132 (321)
T ss_dssp             --------------------EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECT
T ss_pred             --------------------eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECC
Confidence                                123568999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ++++|++|+.||.|++|++++++... .+..|...|.+++|.|     ++++|++++.||.|++||              
T Consensus       133 dg~~l~~g~~dg~v~i~~~~~~~~~~-~~~~~~~~v~~~~~sp-----dg~~lasg~~dg~i~iwd--------------  192 (321)
T 3ow8_A          133 DSQYLATGTHVGKVNIFGVESGKKEY-SLDTRGKFILSIAYSP-----DGKYLASGAIDGIINIFD--------------  192 (321)
T ss_dssp             TSSEEEEECTTSEEEEEETTTCSEEE-EEECSSSCEEEEEECT-----TSSEEEEEETTSCEEEEE--------------
T ss_pred             CCCEEEEEcCCCcEEEEEcCCCceeE-EecCCCceEEEEEECC-----CCCEEEEEcCCCeEEEEE--------------
Confidence            99999999999999999998876542 2334444444444433     233333333333333333              


Q ss_pred             ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         340 RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       340 ~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                                                 ++++..                                               
T Consensus       193 ---------------------------~~~~~~-----------------------------------------------  198 (321)
T 3ow8_A          193 ---------------------------IATGKL-----------------------------------------------  198 (321)
T ss_dssp             ---------------------------TTTTEE-----------------------------------------------
T ss_pred             ---------------------------CCCCcE-----------------------------------------------
Confidence                                       332211                                               


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                       +..+.+|...|.+++|+|++++|++|+.||+|++||.++++.+..+.
T Consensus       199 ---------------------------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~  245 (321)
T 3ow8_A          199 ---------------------------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS  245 (321)
T ss_dssp             ---------------------------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred             ---------------------------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence                                             22334566778899999999999999999999999999999999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      +|...|.+++|+|++++|++++.|++|++||+.+++++..+.+|.+.|++++|+|++++|++++.|++|++|+.
T Consensus       246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred             CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999973

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=3.3e-48  Score=374.75  Aligned_cols=286  Identities=25%  Similarity=0.432  Sum_probs=235.7

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .+|.+|.+.|.+++|+|++++||||+.||+|+|||+.++.++.                                     
T Consensus         7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~-------------------------------------   49 (304)
T 2ynn_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR-------------------------------------   49 (304)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred             EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-------------------------------------
Confidence            3567899999999999999999999999999999998775432                                     


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                        .+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++
T Consensus        50 ------------------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~  111 (304)
T 2ynn_A           50 ------------------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY  111 (304)
T ss_dssp             ------------------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred             ------------------EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCE
Confidence                              23468899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      |++|+.|++|++||++++......                                               +.+|...|.
T Consensus       112 l~sgs~D~~v~lWd~~~~~~~~~~-----------------------------------------------~~~h~~~v~  144 (304)
T 2ynn_A          112 VLSGSDDLTVKLWNWENNWALEQT-----------------------------------------------FEGHEHFVM  144 (304)
T ss_dssp             EEEEETTSCEEEEEGGGTTEEEEE-----------------------------------------------ECCCCSCEE
T ss_pred             EEEECCCCeEEEEECCCCcchhhh-----------------------------------------------hcccCCcEE
Confidence            999999999999998655333222                                               334555555


Q ss_pred             EEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         344 CIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       344 ~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      +++|++.  ..+++|+.|++|++||++++.                                                  
T Consensus       145 ~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~--------------------------------------------------  174 (304)
T 2ynn_A          145 CVAFNPKDPSTFASGCLDRTVKVWSLGQST--------------------------------------------------  174 (304)
T ss_dssp             EEEECTTCTTEEEEEETTSEEEEEETTCSS--------------------------------------------------
T ss_pred             EEEECCCCCCEEEEEeCCCeEEEEECCCCC--------------------------------------------------
Confidence            5555542  245555555555555543221                                                  


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC--CCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                   .......+|...+..+.|+|  ++++|++|+.|++|++||.++++++.++.
T Consensus       175 -----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~  225 (304)
T 2ynn_A          175 -----------------------------PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE  225 (304)
T ss_dssp             -----------------------------CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             -----------------------------ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC
Confidence                                         11111223445678888876  78899999999999999999999999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCC--EEEEeeCCCcEEEc
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE--KVASGGKDKVLRLW  571 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~--~l~s~~~d~~i~iw  571 (573)
                      +|...|.+++|+|++++|++|+.|++|++||+.++++++.+..|.+.+++++|+|+++  +|++|+.||.+ +|
T Consensus       226 ~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~-~~  298 (304)
T 2ynn_A          226 GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFT-VL  298 (304)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEE-EE
T ss_pred             CCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceE-EE
Confidence            9999999999999999999999999999999999999999999999999999999875  58888777654 44

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=3.7e-47  Score=404.90  Aligned_cols=397  Identities=17%  Similarity=0.279  Sum_probs=318.2

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCC----cceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .|.+.|.+++|+|+|++||+++ |+.|+|||+.++    ++.                                      
T Consensus        16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~--------------------------------------   56 (615)
T 1pgu_A           16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPV--------------------------------------   56 (615)
T ss_dssp             CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSE--------------------------------------
T ss_pred             CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccc--------------------------------------
Confidence            5899999999999999999998 889999999876    322                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCc-EEEEEEcC--CCCeEEEEeCCCeEEEEECCCC--------eeeEEecCCCCcE
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEA-VISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--------TPLFKCEGHKHWV  252 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~-V~~~~fsp--~g~~las~s~d~~i~iwd~~~~--------~~~~~~~~h~~~V  252 (573)
                                       ..+.+|.+. |.+++|+|  ++++||+|+.|++|++||+.++        ..+..+.+|...|
T Consensus        57 -----------------~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v  119 (615)
T 1pgu_A           57 -----------------VQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI  119 (615)
T ss_dssp             -----------------EEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred             -----------------eEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccE
Confidence                             235689999 99999999  9999999999999999999754        5667788999999


Q ss_pred             EEEEEcCCCCeEEEEeeC----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECC
Q psy2671         253 LCIAWSPDSKQLVSGCKN----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVI  327 (573)
Q Consensus       253 ~~v~~s~dg~~l~sgs~d----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~  327 (573)
                      .+++|+|++++|++++.+    +.|++||  .++.+ ..+.+|...|.++.|.|     +++ .+++++.|+.|++||+.
T Consensus       120 ~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~-~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~d~~v~vwd~~  191 (615)
T 1pgu_A          120 SDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSL-GEVSGHSQRINACHLKQ-----SRPMRSMTVGDDGSVVFYQGP  191 (615)
T ss_dssp             EEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEE-EECCSCSSCEEEEEECS-----SSSCEEEEEETTTEEEEEETT
T ss_pred             EEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcc-eeeecCCccEEEEEECC-----CCCcEEEEEeCCCcEEEEeCC
Confidence            999999999999999988    7899998  34443 45678999999999987     344 79999999999999999


Q ss_pred             CCeEEEEecCCCc---cEEEEEECCC-c-EEEEEeCCCeEEEEeCCCCeeeEec-c---CCcceeeEEEeccCceeEEEE
Q psy2671         328 LSQCVRVLTSHTR---SVTCIRWGGS-G-LIYSASQDRTIKVWRASDGVMCRTL-E---GHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       328 ~~~~~~~~~~h~~---~v~~~~~~~~-~-~l~s~s~d~~i~vw~~~~~~~~~~~-~---~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      .++....+.+|..   .|.+++|+++ + .+++++.|+.|++||+.++.....+ .   +|...|..++++ +....+..
T Consensus       192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~  270 (615)
T 1pgu_A          192 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV  270 (615)
T ss_dssp             TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE
T ss_pred             CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE
Confidence            9999999999999   9999999988 6 7999999999999999999998888 6   899999999999 76655555


Q ss_pred             cCCCcee-eCCCCchhhhh---h----hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEE------
Q psy2671         399 TSTGGFK-YDPANPEESSK---H----ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLIN------  464 (573)
Q Consensus       399 ~~~~~~~-~~~~~~~~~~~---~----~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~------  464 (573)
                      ..++.+. |+.........   .    .........+++.++++++.|+.+++||+.+.. .+..+.+|...|.      
T Consensus       271 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~  349 (615)
T 1pgu_A          271 GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE-VLKTISGHNKGITALTVNP  349 (615)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE-EEEEECCCSSCEEEEETTT
T ss_pred             cCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc-EEEEEeCCCCCEEEEEecC
Confidence            5555433 44332111000   0    001111112367788888888888888876422 2223333333222      


Q ss_pred             --------------------------------------------------------------------------------
Q psy2671         465 --------------------------------------------------------------------------------  464 (573)
Q Consensus       465 --------------------------------------------------------------------------------  464 (573)
                                                                                                      
T Consensus       350 l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  429 (615)
T 1pgu_A          350 LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDL  429 (615)
T ss_dssp             TEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEE
T ss_pred             cEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCce
Confidence                                                                                            


Q ss_pred             ---------------------EEEECCCCCEEEEeeC-CCcEEEEeCCCCeEE-EeecCCcceEEEEEECCCCCEEEEEe
Q psy2671         465 ---------------------CVEFSPDGRIIASASF-DKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       465 ---------------------~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~-~~~~~h~~~v~~v~~s~dg~~las~s  521 (573)
                                           +++|+  +++|++++. ||.|++||..+++.. ..+.+|...|.+++|+|++++|++++
T Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~  507 (615)
T 1pgu_A          430 LILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD  507 (615)
T ss_dssp             EEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEeccCCceeeecccCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcC
Confidence                                 22232  455666666 777777777666554 66778999999999999999999999


Q ss_pred             CCCcEEEEeCCcccccccccC-cCCCEEEEEEcc----------CCCEEEEeeCCCcEEEcc
Q psy2671         522 ADSTLKVWNMKTKKIEQDLPG-HGDEVYAVDWAP----------DGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       522 ~D~~v~vwd~~~~~~~~~l~~-h~~~v~~~~~s~----------d~~~l~s~~~d~~i~iw~  572 (573)
                      .|+.|++||+.+++.+..+.+ |...|++++|+|          ++++|++++.|+.|++|+
T Consensus       508 ~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~  569 (615)
T 1pgu_A          508 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS  569 (615)
T ss_dssp             TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred             CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence            999999999999999988888 999999999999          999999999999999997

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=5.9e-48  Score=443.77  Aligned_cols=408  Identities=24%  Similarity=0.359  Sum_probs=327.5

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      .+...+.+|.++|.+++|+|++++||||+.|++|+|||+.+++++.                                  
T Consensus       648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~----------------------------------  693 (1249)
T 3sfz_A          648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH----------------------------------  693 (1249)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE----------------------------------
T ss_pred             CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE----------------------------------
Confidence            3455778999999999999999999999999999999998876542                                  


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s  258 (573)
                                           .+.+|...|.+++|+|  ++..+++|+.|++|++||+.++..+..+.+|...|.+++|+
T Consensus       694 ---------------------~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s  752 (1249)
T 3sfz_A          694 ---------------------TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS  752 (1249)
T ss_dssp             ---------------------EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred             ---------------------EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence                                 2347999999999999  45689999999999999999999999999999999999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecc----------------------------------------------------
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQ----------------------------------------------------  286 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~----------------------------------------------------  286 (573)
                      |++++|++++.||.|++||+.++.....                                                    
T Consensus       753 p~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~  832 (1249)
T 3sfz_A          753 PDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL  832 (1249)
T ss_dssp             SSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred             cCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence            9999999999999999999876643211                                                    


Q ss_pred             --cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEE
Q psy2671         287 --PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIK  363 (573)
Q Consensus       287 --~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~  363 (573)
                        ...+|...|.++.|.|     +++.+++++.||.|++||+.++.....+.+|...|.+++|++++ .+++++.|++|+
T Consensus       833 ~~~~~~~~~~v~~~~~sp-----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~  907 (1249)
T 3sfz_A          833 AEIHTGHHSTIQYCDFSP-----YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIR  907 (1249)
T ss_dssp             EEEECSSSSCCCEEEECS-----STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eEEcCCCCCceEEEEEcC-----CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEE
Confidence              0114556666777655     67899999999999999999999999999999999999999887 789999999999


Q ss_pred             EEeCCC--------------------------------------------------------------------------
Q psy2671         364 VWRASD--------------------------------------------------------------------------  369 (573)
Q Consensus       364 vw~~~~--------------------------------------------------------------------------  369 (573)
                      +|+..+                                                                          
T Consensus       908 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i  987 (1249)
T 3sfz_A          908 VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI  987 (1249)
T ss_dssp             EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEE
T ss_pred             EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEE
Confidence            998532                                                                          


Q ss_pred             -----CeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhhh--hhh-hhheeeeCCCCcEEEEEeCCCe
Q psy2671         370 -----GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESS--KHA-LAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       370 -----~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                           +.....+.+|...|..++++++....+....++.+. |+........  .+. .......+| +..+++++.|++
T Consensus       988 ~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~dg~ 1066 (1249)
T 3sfz_A          988 IELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQ-DSRLLSWSFDGT 1066 (1249)
T ss_dssp             EETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECS-SSEEEEEESSSE
T ss_pred             EEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcC-CCcEEEEECCCc
Confidence                 122233445556666666666655444444444332 2222111000  000 001112234 446788888888


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG  520 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~  520 (573)
                      +++||+.++. ....+.+|...|.+++|+|+++++++++.||+|++||..+++.+..+.+|...|++++|+|||++||++
T Consensus      1067 v~vwd~~~~~-~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~ 1145 (1249)
T 3sfz_A         1067 VKVWNVITGR-IERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATG 1145 (1249)
T ss_dssp             EEEEETTTTC-CCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEE
T ss_pred             EEEEECCCCc-eeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEE
Confidence            8888887654 456678899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCcEEEEeCCcccccccc---------cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         521 SADSTLKVWNMKTKKIEQDL---------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       521 s~D~~v~vwd~~~~~~~~~l---------~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.||.|++||+.+++.+..+         .+|.+.|++++|+||+++|++++  |.|++|+
T Consensus      1146 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~--g~v~vwd 1204 (1249)
T 3sfz_A         1146 DDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG--GYLKWWN 1204 (1249)
T ss_dssp             ETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES--SSEEEBC
T ss_pred             eCCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC--CeEEEEE
Confidence            99999999999998877665         67999999999999999999886  8999997

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=8.3e-47  Score=371.08  Aligned_cols=290  Identities=27%  Similarity=0.460  Sum_probs=261.7

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.+.|.+++|+|++++|++|+.|++|++||+.++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.+
T Consensus        49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~  128 (340)
T 1got_B           49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT  128 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred             eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECcc
Confidence            45779999999999999999999999999999999999999999999999999999999999999999999999999865


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      +...                                            ......+.+|...|.++.|.+++.+++++.|+
T Consensus       129 ~~~~--------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  164 (340)
T 1got_B          129 REGN--------------------------------------------VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT  164 (340)
T ss_dssp             CSBS--------------------------------------------CEEEEEEECCSSCEEEEEEEETTEEEEEETTS
T ss_pred             CCCc--------------------------------------------ceeEEEecCCCccEEEEEECCCCcEEEEECCC
Confidence            4210                                            01123456788899999999888999999999


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      +|++||+.++.....+.+|...|.+++++                                     |++.++++|+.|++
T Consensus       165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~-------------------------------------~~~~~l~sg~~d~~  207 (340)
T 1got_B          165 TCALWDIETGQQTTTFTGHTGDVMSLSLA-------------------------------------PDTRLFVSGACDAS  207 (340)
T ss_dssp             CEEEEETTTTEEEEEECCCSSCEEEEEEC-------------------------------------TTSSEEEEEETTSC
T ss_pred             cEEEEECCCCcEEEEEcCCCCceEEEEEC-------------------------------------CCCCEEEEEeCCCc
Confidence            99999999999999999999999888876                                     45789999999999


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~la  518 (573)
                      |++||+++.. ....+.+|...|++++|+|++++|++|+.||+|++||.++++.+..+.  .+...|.+++|+|+|++|+
T Consensus       208 v~~wd~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~  286 (340)
T 1got_B          208 AKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL  286 (340)
T ss_dssp             EEEEETTTCS-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred             EEEEECCCCe-eEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEE
Confidence            9999998653 456788999999999999999999999999999999999998777664  3345799999999999999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++++|+|||.|++|++|+
T Consensus       287 ~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            999999999999999999999999999999999999999999999999999996

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=1.3e-46  Score=369.58  Aligned_cols=289  Identities=25%  Similarity=0.430  Sum_probs=252.4

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...|.||.++|++++|+|++++||||+.|++|+|||+.+++++.                                   
T Consensus        47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-----------------------------------   91 (340)
T 1got_B           47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-----------------------------------   91 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------------------------
T ss_pred             hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-----------------------------------
Confidence            345678999999999999999999999999999999998765432                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----eeeEEecCCCCcEEEEEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAW  257 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~  257 (573)
                                          .+.+|...|.+++|+|++++|++|+.|+.|++|++.++    .....+.+|...|.+++|
T Consensus        92 --------------------~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~  151 (340)
T 1got_B           92 --------------------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF  151 (340)
T ss_dssp             --------------------EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE
T ss_pred             --------------------EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE
Confidence                                23468889999999999999999999999999999875    345567899999999999


Q ss_pred             cCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       258 s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      ++++. +++++.|++|++||+++++.+ ..+.+|...|.+++|.|     +++++++++.|++|++||+..+.+...+.+
T Consensus       152 ~~~~~-l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~  224 (340)
T 1got_B          152 LDDNQ-IVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAP-----DTRLFVSGACDASAKLWDVREGMCRQTFTG  224 (340)
T ss_dssp             EETTE-EEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred             CCCCc-EEEEECCCcEEEEECCCCcEE-EEEcCCCCceEEEEECC-----CCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence            98875 999999999999999998765 45678999999999987     567899999999999999999999999999


Q ss_pred             CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      |...|.+++|++++ .+++|+.|++|++||++++.....+.                                       
T Consensus       225 h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---------------------------------------  265 (340)
T 1got_B          225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS---------------------------------------  265 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC---------------------------------------
T ss_pred             CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc---------------------------------------
Confidence            99999999998876 68888888888888877554321110                                       


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                                                             ...+...|.+++|+|+|++|++|+.||.|++||..+++.+.
T Consensus       266 ---------------------------------------~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~  306 (340)
T 1got_B          266 ---------------------------------------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG  306 (340)
T ss_dssp             ---------------------------------------CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             ---------------------------------------cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEee
Confidence                                                   01123458999999999999999999999999999999999


Q ss_pred             eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       497 ~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      .+.+|...|++++|+|||++||+|+.|++|++||
T Consensus       307 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            9999999999999999999999999999999996

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.6e-47  Score=380.56  Aligned_cols=293  Identities=25%  Similarity=0.469  Sum_probs=247.8

Q ss_pred             cccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       199 ~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                      |..++.||.+.|++++|+|++++|++|+.|++|+|||+.+++....+.+|...|.+++|+|+|++|++|+.|+.+++|++
T Consensus        58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~  137 (380)
T 3iz6_a           58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL  137 (380)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred             EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence            34567899999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCc------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-----cCCCccEEEEEE
Q psy2671         279 STGK------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-----TSHTRSVTCIRW  347 (573)
Q Consensus       279 ~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-----~~h~~~v~~~~~  347 (573)
                      .+..      .....+.+|...|.++.|.|.    .+.++++++.|++|++||+.+++.+..+     .+|...|.++.|
T Consensus       138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~----~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~  213 (380)
T 3iz6_a          138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPD----QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSI  213 (380)
T ss_dssp             CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS----SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEE
T ss_pred             CCCccccCCccceeeccCCCcceEEEEEecC----CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEe
Confidence            7532      123456799999998888763    3457999999999999999988777655     345555555555


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      .+                                                                             +
T Consensus       214 ~~-----------------------------------------------------------------------------~  216 (380)
T 3iz6_a          214 NS-----------------------------------------------------------------------------L  216 (380)
T ss_dssp             CS-----------------------------------------------------------------------------S
T ss_pred             ec-----------------------------------------------------------------------------C
Confidence            32                                                                             1


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-----  502 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----  502 (573)
                      ++.++++|+.|++|++||++........+.+|...|++++|+|++++|++|+.||+|++||.++++.+..+..+.     
T Consensus       217 ~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~  296 (380)
T 3iz6_a          217 NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDN  296 (380)
T ss_dssp             SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCC
T ss_pred             CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccccc
Confidence            244566666666666666654444556677899999999999999999999999999999999999888776543     


Q ss_pred             --ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc----cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 --QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL----PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 --~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l----~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                        ..|++++|+|+|++|++|+.|+.|++||+..++....+    .+|.+.|.+++|+|||++|+|||.|++|++|+
T Consensus       297 ~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~  372 (380)
T 3iz6_a          297 ELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA  372 (380)
T ss_dssp             SSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             ccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence              24889999999999999999999999999888776555    68999999999999999999999999999997

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=4.3e-46  Score=367.78  Aligned_cols=291  Identities=24%  Similarity=0.419  Sum_probs=251.6

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...|.||.+.|++++|+|++++|||||.|++|+|||..++....                                    
T Consensus        57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~------------------------------------  100 (354)
T 2pbi_B           57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH------------------------------------  100 (354)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE------------------------------------
T ss_pred             EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce------------------------------------
Confidence            34678999999999999999999999999999999987764331                                    


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC------eeeEEecCCCCcEEEEE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ------TPLFKCEGHKHWVLCIA  256 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~------~~~~~~~~h~~~V~~v~  256 (573)
                                         .+..|...|.+++|+|+|.++++|+.|+.+++|++...      .....+.+|...|.+++
T Consensus       101 -------------------~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~  161 (354)
T 2pbi_B          101 -------------------AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACS  161 (354)
T ss_dssp             -------------------EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEE
T ss_pred             -------------------EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEE
Confidence                               12357788999999999999999999999999998643      23456678999999999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  336 (573)
                      |+|++.+|++++.|++|++||+++++.+ ..+.+|...|.++.|.|.   .+++.|++++.||+|++||+.+++++..+.
T Consensus       162 ~~~~~~~l~t~s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~~~~~~~---~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~  237 (354)
T 2pbi_B          162 FTNSDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPS---ETGNTFVSGGCDKKAMVWDMRSGQCVQAFE  237 (354)
T ss_dssp             ECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECCC---SSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred             EeCCCCEEEEEeCCCcEEEEeCCCCeEE-EEEcCCCCCeEEEEEEeC---CCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence            9999999999999999999999998765 457789999999998763   356799999999999999999999999999


Q ss_pred             CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         337 SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       337 ~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      +|...|.+++|++++ .+++++.|++|++||++.+.....+..                                     
T Consensus       238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-------------------------------------  280 (354)
T 2pbi_B          238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK-------------------------------------  280 (354)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------------------------------------
T ss_pred             CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-------------------------------------
Confidence            999999999998876 788899999999998875432211100                                     


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI  495 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~  495 (573)
                                                               ..+...+.+++|+|+|++|++|+.|++|++||..+++.+
T Consensus       281 -----------------------------------------~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~  319 (354)
T 2pbi_B          281 -----------------------------------------ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRV  319 (354)
T ss_dssp             -----------------------------------------TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE
T ss_pred             -----------------------------------------CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceE
Confidence                                                     011235789999999999999999999999999999999


Q ss_pred             EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       496 ~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ..+.+|...|++++|+|||++||+|+.|++|++|+
T Consensus       320 ~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          320 SILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999999999999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=5.8e-46  Score=366.85  Aligned_cols=287  Identities=24%  Similarity=0.428  Sum_probs=247.0

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.+.|++++|+|++++||||+.|++|+|||..+++....+..|...|.+++|+|+|.+|++|+.|+.+++|++..
T Consensus        58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~  137 (354)
T 2pbi_B           58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTF  137 (354)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCC
T ss_pred             EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEec
Confidence            45679999999999999999999999999999999999988888899999999999999999999999999999999865


Q ss_pred             Cce-----ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC---cE
Q psy2671         281 GKQ-----IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS---GL  352 (573)
Q Consensus       281 ~~~-----~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~  352 (573)
                      ...     ....+.+|...|.++.|.|     ++..+++++.|++|++||+.+++++..+.+|...|.++.+.++   ..
T Consensus       138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~  212 (354)
T 2pbi_B          138 DKNENMAAKKKSVAMHTNYLSACSFTN-----SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT  212 (354)
T ss_dssp             CTTCCSGGGCEEEEECSSCEEEEEECS-----SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred             cccccccccceeeeccCCcEEEEEEeC-----CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence            421     1223557999999999876     4578999999999999999999988888899888888887642   24


Q ss_pred             EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         353 IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       353 l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      +++|+.|++|++||++++.                                                             
T Consensus       213 l~sgs~Dg~v~~wd~~~~~-------------------------------------------------------------  231 (354)
T 2pbi_B          213 FVSGGCDKKAMVWDMRSGQ-------------------------------------------------------------  231 (354)
T ss_dssp             EEEEETTSCEEEEETTTCC-------------------------------------------------------------
T ss_pred             EEEEeCCCeEEEEECCCCc-------------------------------------------------------------
Confidence            5555555555555544332                                                             


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC--cceEEEEEE
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAW  510 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h--~~~v~~v~~  510 (573)
                                         ....+.+|...|++++|+|++.+|++|+.|++|++||++.++.+..+..+  ...+.+++|
T Consensus       232 -------------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~  292 (354)
T 2pbi_B          232 -------------------CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF  292 (354)
T ss_dssp             -------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred             -------------------EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence                               23345567888999999999999999999999999999998877766543  457899999


Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+|++|++|+.|++|++||+.+++.+..+.+|.+.|++++|+||+++|++|+.|++|++|+
T Consensus       293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            99999999999999999999999998889999999999999999999999999999999995

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.7e-46  Score=366.35  Aligned_cols=295  Identities=29%  Similarity=0.540  Sum_probs=237.2

Q ss_pred             cccCCCccc-cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         103 TSSMPGHAE-AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       103 ~~~~~gH~~-~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ...+++|.+ .|++++|+|+|++||||+.|++|||||+.++.....                                  
T Consensus         8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~----------------------------------   53 (345)
T 3fm0_A            8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICK----------------------------------   53 (345)
T ss_dssp             EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEE----------------------------------
T ss_pred             eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceee----------------------------------
Confidence            446778988 999999999999999999999999999876532210                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~  259 (573)
                                        .....||.+.|.+++|+|+|++||+|+.|++|+|||+.++  +.+..+.+|...|.+++|+|
T Consensus        54 ------------------~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp  115 (345)
T 3fm0_A           54 ------------------SVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP  115 (345)
T ss_dssp             ------------------EEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECT
T ss_pred             ------------------eeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeC
Confidence                              0113589999999999999999999999999999998776  45678899999999999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ++++|++|+.|++|++||+..+...                                             .++..+.+|.
T Consensus       116 ~~~~l~s~s~D~~v~iwd~~~~~~~---------------------------------------------~~~~~~~~h~  150 (345)
T 3fm0_A          116 SGNLLATCSRDKSVWVWEVDEEDEY---------------------------------------------ECVSVLNSHT  150 (345)
T ss_dssp             TSSEEEEEETTSCEEEEEECTTSCE---------------------------------------------EEEEEECCCC
T ss_pred             CCCEEEEEECCCeEEEEECCCCCCe---------------------------------------------EEEEEecCcC
Confidence            9999999999999999998654211                                             1123345677


Q ss_pred             ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       340 ~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ..|.+++|++++ .+++++.|++|++|+.+++..                                              
T Consensus       151 ~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~----------------------------------------------  184 (345)
T 3fm0_A          151 QDVKHVVWHPSQELLASASYDDTVKLYREEEDDW----------------------------------------------  184 (345)
T ss_dssp             SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE----------------------------------------------
T ss_pred             CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE----------------------------------------------
Confidence            777788777655 566667777777776433211                                              


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-------
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-------  491 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-------  491 (573)
                                                      .....+.+|...|.+++|+|+|++|++|+.||+|++||...       
T Consensus       185 --------------------------------~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~  232 (345)
T 3fm0_A          185 --------------------------------VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV  232 (345)
T ss_dssp             --------------------------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred             --------------------------------EEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence                                            11234567888999999999999999999999999998532       


Q ss_pred             --------CeEEEeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc---------cccccCcCCCEEEEEEc
Q psy2671         492 --------GKFITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI---------EQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       492 --------~~~~~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~---------~~~l~~h~~~v~~~~~s  553 (573)
                              .+++.++.+ |...|++++|+|++..||+++.|+.|++|+......         .....+|.+.|++++|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~  312 (345)
T 3fm0_A          233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN  312 (345)
T ss_dssp             CCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred             eeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence                    133455555 888999999999999999999999999999876432         12346899999999999


Q ss_pred             cCC-CEEEEeeCCCcEEEcc
Q psy2671         554 PDG-EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       554 ~d~-~~l~s~~~d~~i~iw~  572 (573)
                      |++ .+|||||.||+|++|+
T Consensus       313 p~~~~~laS~s~Dg~v~~W~  332 (345)
T 3fm0_A          313 PKEPGLLASCSDDGEVAFWK  332 (345)
T ss_dssp             SSSTTEEEEEETTSCEEEEE
T ss_pred             CCCceEEEEcCCCCcEEEEE
Confidence            997 4899999999999997

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-45  Score=406.05  Aligned_cols=399  Identities=13%  Similarity=0.176  Sum_probs=293.5

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      .|..+|.+++|+| |++|||++.|++|+|||+.+++++..                                        
T Consensus        56 ~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~----------------------------------------   94 (902)
T 2oaj_A           56 EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT----------------------------------------   94 (902)
T ss_dssp             SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEE----------------------------------------
T ss_pred             CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE----------------------------------------
Confidence            4888999999999 88999999999999999988765421                                        


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-----------EEecCCCCcEEEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-----------FKCEGHKHWVLCIA  256 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-----------~~~~~h~~~V~~v~  256 (573)
                                     + .|.+.|++++|+|++++|++|+.||+|++||+.++...           ....+|...|.+++
T Consensus        95 ---------------~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~  158 (902)
T 2oaj_A           95 ---------------V-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ  158 (902)
T ss_dssp             ---------------E-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred             ---------------E-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence                           1 15578999999999999999999999999999987653           23468999999999


Q ss_pred             EcCC-CCeEEEEeeCCeEEEEECCCCceeccc-----------------ccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         257 WSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQP-----------------MRGHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       257 ~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      |+|+ +..|++|+.||.| +||+++++.+...                 ..+|...|.+++|.|     ++++|++++.|
T Consensus       159 ~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-----dg~~lasgs~D  232 (902)
T 2oaj_A          159 WNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-----NSLHIITIHED  232 (902)
T ss_dssp             EETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-----TSSEEEEEETT
T ss_pred             EccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-----CCCEEEEEECC
Confidence            9996 4689999999999 9999988654221                 123467899999987     57899999999


Q ss_pred             CcEEEEECCCCeEEEE--e---cC-------------CCccEEEEEEC----CC--cEEEEEeCCC-----eEEEEe---
Q psy2671         319 GAIRIWDVILSQCVRV--L---TS-------------HTRSVTCIRWG----GS--GLIYSASQDR-----TIKVWR---  366 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~--~---~~-------------h~~~v~~~~~~----~~--~~l~s~s~d~-----~i~vw~---  366 (573)
                      |+|++||+.+++++..  +   ..             |...|.+++|+    ++  ..+++|+.|.     .+++|+   
T Consensus       233 g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~  312 (902)
T 2oaj_A          233 NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGY  312 (902)
T ss_dssp             CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEE
T ss_pred             CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCC
Confidence            9999999998877653  2   12             34578888883    33  2455665442     455554   


Q ss_pred             --------------------------------------------------------------------CCCCeeeEe---
Q psy2671         367 --------------------------------------------------------------------ASDGVMCRT---  375 (573)
Q Consensus       367 --------------------------------------------------------------------~~~~~~~~~---  375 (573)
                                                                                          +.+|.....   
T Consensus       313 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~  392 (902)
T 2oaj_A          313 TPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASL  392 (902)
T ss_dssp             CCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGG
T ss_pred             CCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccccc
Confidence                                                                                332211110   


Q ss_pred             ----c----------------------------------cCCcceeeEEEeccCceeEEEEcCCCcee-eCCCCchhhh-
Q psy2671         376 ----L----------------------------------EGHAHWVNTLALSTDYLMRVEATSTGGFK-YDPANPEESS-  415 (573)
Q Consensus       376 ----~----------------------------------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~-  415 (573)
                          +                                  .||...+..++++++....+....++.++ |+........ 
T Consensus       393 ~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~  472 (902)
T 2oaj_A          393 FPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDN  472 (902)
T ss_dssp             SCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTT
T ss_pred             CCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCC
Confidence                1                                  11222222233344444455555555544 3332221100 


Q ss_pred             -------------hh-hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-------------------------------
Q psy2671         416 -------------KH-ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-------------------------------  450 (573)
Q Consensus       416 -------------~~-~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-------------------------------  450 (573)
                                   .+ ......+++|++.+||+|+.||+|++|++.+.+                               
T Consensus       473 ~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  552 (902)
T 2oaj_A          473 ASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVD  552 (902)
T ss_dssp             BCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEE
T ss_pred             ceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccc
Confidence                         00 011223568999999999999999999986542                               


Q ss_pred             -------------cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-----eec-CCcceEEEEEEC
Q psy2671         451 -------------KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-----TLR-GHVQAVYMVAWS  511 (573)
Q Consensus       451 -------------~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-----~~~-~h~~~v~~v~~s  511 (573)
                                   .++..+.+|...|++|+||||| +||+|+.|++|+|||++++..+.     .+. +|...|++++||
T Consensus       553 ~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs  631 (902)
T 2oaj_A          553 VRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFV  631 (902)
T ss_dssp             CGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred             ccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEE
Confidence                         1256677899999999999999 99999999999999998887653     343 899999999999


Q ss_pred             -----CCC---CEEEEEeCCCcEEEEeC---CcccccccccCcC-----CCEEEEE-Ec---------------------
Q psy2671         512 -----SDS---RLLVSGSADSTLKVWNM---KTKKIEQDLPGHG-----DEVYAVD-WA---------------------  553 (573)
Q Consensus       512 -----~dg---~~las~s~D~~v~vwd~---~~~~~~~~l~~h~-----~~v~~~~-~s---------------------  553 (573)
                           |||   ++|++|+.|++|++||+   .+++....+.+|.     ++|.++. |+                     
T Consensus       632 ~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~  711 (902)
T 2oaj_A          632 IMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGL  711 (902)
T ss_dssp             EEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTC
T ss_pred             EEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCC
Confidence                 886   89999999999999999   7888777777764     6787776 76                     


Q ss_pred             -cCCCEEEEeeCCCcEEEcc
Q psy2671         554 -PDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       554 -~d~~~l~s~~~d~~i~iw~  572 (573)
                       +++..|+++  +..||||+
T Consensus       712 ~~~~~~l~~~--~~~ir~~~  729 (902)
T 2oaj_A          712 CIPGIVLITG--FDDIRLIT  729 (902)
T ss_dssp             CCCEEEEEEC--SSEEEEEC
T ss_pred             CCCeEEEEEe--ccceEEEe
Confidence             455444444  77899997

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=3.5e-45  Score=355.99  Aligned_cols=298  Identities=24%  Similarity=0.422  Sum_probs=245.7

Q ss_pred             cccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         103 TSSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ...|.||.++|++++|+|++ ++|+|||.|++|++||+.+.....                                   
T Consensus        10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~-----------------------------------   54 (319)
T 3frx_A           10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF-----------------------------------   54 (319)
T ss_dssp             EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE-----------------------------------
T ss_pred             EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc-----------------------------------
Confidence            34678999999999999965 899999999999999986432110                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                     ..+...+.||...|.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++
T Consensus        55 ---------------~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~  119 (319)
T 3frx_A           55 ---------------GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA  119 (319)
T ss_dssp             ---------------EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred             ---------------cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC
Confidence                           00113456899999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc-CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL-NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      .+|++|+.|++|++||++.. .+ ..+.+|...|.++.|.|... ..++..+++++.|+.|++||+...+....+.+|..
T Consensus       120 ~~l~s~s~D~~i~vwd~~~~-~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~  197 (319)
T 3frx_A          120 SMIISGSRDKTIKVWTIKGQ-CL-ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNS  197 (319)
T ss_dssp             CEEEEEETTSCEEEEETTSC-EE-EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCS
T ss_pred             CEEEEEeCCCeEEEEECCCC-eE-EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCC
Confidence            99999999999999999743 33 35678999999999987532 22456899999999999999999999999999999


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|.+++|++++ .+++++.|++|++||+.++....                                             
T Consensus       198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~---------------------------------------------  232 (319)
T 3frx_A          198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY---------------------------------------------  232 (319)
T ss_dssp             CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---------------------------------------------
T ss_pred             cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---------------------------------------------
Confidence            99999998776 57777778888887776543321                                             


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                         .+. +...|.+++|+|++.+|++++.+ .+++|+...+..+..+.
T Consensus       233 -----------------------------------~~~-~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~  275 (319)
T 3frx_A          233 -----------------------------------TLS-AQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLR  275 (319)
T ss_dssp             -----------------------------------EEE-CCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEEC
T ss_pred             -----------------------------------Eec-CCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccC
Confidence                                               111 12458899999999999988755 59999998877666554


Q ss_pred             --------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         500 --------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       500 --------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                              .|...+.+++|+|||++|++|+.|++|++||+.++
T Consensus       276 ~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          276 PEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             ccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence                    24567899999999999999999999999998764

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.4e-46  Score=375.37  Aligned_cols=302  Identities=24%  Similarity=0.459  Sum_probs=255.2

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...|.||.++|++++|+|++++|||||.|++|+|||..+++++.                                   
T Consensus        58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~-----------------------------------  102 (380)
T 3iz6_a           58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH-----------------------------------  102 (380)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-----------------------------------
T ss_pred             EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce-----------------------------------
Confidence            445788999999999999999999999999999999998765432                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-------eeEEecCCCCcEEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-------PLFKCEGHKHWVLC  254 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-------~~~~~~~h~~~V~~  254 (573)
                                          .+.+|...|.+++|+|+|++||+|+.|+.|++||+.+..       ....+.+|.+.|.+
T Consensus       103 --------------------~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~  162 (380)
T 3iz6_a          103 --------------------AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS  162 (380)
T ss_dssp             --------------------EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred             --------------------EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence                                234688999999999999999999999999999987532       23457899999999


Q ss_pred             EEEcCCC-CeEEEEeeCCeEEEEECCCCceecc----cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC-C
Q psy2671         255 IAWSPDS-KQLVSGCKNGVIHAWDSSTGKQIGQ----PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI-L  328 (573)
Q Consensus       255 v~~s~dg-~~l~sgs~dg~i~vwd~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-~  328 (573)
                      ++|+|++ .+|++|+.|++|++||+.+++.+..    ...+|...|.++.|.+.    +++.+++++.|++|++||+. .
T Consensus       163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~sgs~D~~v~~wd~~~~  238 (380)
T 3iz6_a          163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSL----NANMFISGSCDTTVRLWDLRIT  238 (380)
T ss_dssp             CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSS----SCCEEEEEETTSCEEEEETTTT
T ss_pred             EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecC----CCCEEEEEECCCeEEEEECCCC
Confidence            9999974 5799999999999999999876532    22689999999998763    56789999999999999997 4


Q ss_pred             CeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         329 SQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       329 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      .+++..+.+|...|.+++|++++ .+++|+.|++|++||++++.....+..+..                          
T Consensus       239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~--------------------------  292 (380)
T 3iz6_a          239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD--------------------------  292 (380)
T ss_dssp             CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS--------------------------
T ss_pred             CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc--------------------------
Confidence            57788899999999999999887 799999999999999988765544332110                          


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW  487 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw  487 (573)
                                                                     ....+...|.+++|+|+|++|++|+.||.|++|
T Consensus       293 -----------------------------------------------~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw  325 (380)
T 3iz6_a          293 -----------------------------------------------RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW  325 (380)
T ss_dssp             -----------------------------------------------SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred             -----------------------------------------------ccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence                                                           001122347899999999999999999999999


Q ss_pred             eCCCCeEEEee----cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         488 DGRIGKFITTL----RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       488 d~~~~~~~~~~----~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      |..+++.+..+    .+|...|++++|+|||++|++|+.|++|++|++...+
T Consensus       326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            99999887776    6899999999999999999999999999999987653

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1e-45  Score=365.43  Aligned_cols=283  Identities=19%  Similarity=0.295  Sum_probs=234.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeC------CCeEEEEECCCCeee----EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSG------DTTVRFWDVTTQTPL----FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~------d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      +|...|.+++|||||++||+|+.      |++|++|+..++.+.    ....+|...|.+++|+|++. +++++.||+|+
T Consensus        40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~  118 (357)
T 4g56_B           40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVE  118 (357)
T ss_dssp             CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEE
T ss_pred             cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEE
Confidence            69999999999999999999997      788999998776542    33457888999999999985 66788999999


Q ss_pred             EEECCCCceecc---cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc
Q psy2671         275 AWDSSTGKQIGQ---PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG  351 (573)
Q Consensus       275 vwd~~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~  351 (573)
                      +||+.+++....   ...+|...|.+++|.|     ++++|++++.|++|++||+.+++++..+.+|...|.+++|++++
T Consensus       119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-----dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~  193 (357)
T 4g56_B          119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFS-----DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK  193 (357)
T ss_dssp             EC--------CCCCEEECCCSSCEEEEEECS-----SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred             EeeccccceeEEEeeccCCCCCCEEEEEECC-----CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence            999988764321   2358999999999976     67899999999999999999999999999999999999997654


Q ss_pred             --EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671         352 --LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG  429 (573)
Q Consensus       352 --~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (573)
                        .+++++.|++|++||++++.....                                                      
T Consensus       194 ~~~~~s~~~dg~v~~wd~~~~~~~~~------------------------------------------------------  219 (357)
T 4g56_B          194 DTIFLSCGEDGRILLWDTRKPKPATR------------------------------------------------------  219 (357)
T ss_dssp             SSCEEEEETTSCEEECCTTSSSCBCB------------------------------------------------------
T ss_pred             CceeeeeccCCceEEEECCCCceeee------------------------------------------------------
Confidence              577777788888887765432211                                                      


Q ss_pred             cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV  508 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v  508 (573)
                                              .....|...+.+++|+|+ +.+||+|+.|+.|++||+++++.+..+.+|...|+++
T Consensus       220 ------------------------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l  275 (357)
T 4g56_B          220 ------------------------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL  275 (357)
T ss_dssp             ------------------------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred             ------------------------eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence                                    112234566899999997 5689999999999999999999999999999999999


Q ss_pred             EECCCC-CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEeeCCCcEEEcc
Q psy2671         509 AWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       509 ~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+|++ ++||+|+.|++|+|||++++++++.+ +|.+.|++++|+| |+++|+|+|.|++|++|+
T Consensus       276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~  340 (357)
T 4g56_B          276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH  340 (357)
T ss_dssp             EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred             EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence            999987 58999999999999999999887655 7999999999998 799999999999999997

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-46  Score=378.41  Aligned_cols=328  Identities=17%  Similarity=0.310  Sum_probs=270.4

Q ss_pred             ccccEEEEEEcCCCC-eeEEe----------eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCc
Q psy2671         109 HAEAVISVKFSPNGR-SLASG----------SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNT  177 (573)
Q Consensus       109 H~~~V~~l~~s~~~~-~lat~----------s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (573)
                      +...|.+++|+|+++ +||+|          +.|++|+|||+.++....                               
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~-------------------------------   59 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK-------------------------------   59 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS-------------------------------
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc-------------------------------
Confidence            455788999999987 99999          899999999998764210                               


Q ss_pred             cceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC----CeeeEEecCCCCcEE
Q psy2671         178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT----QTPLFKCEGHKHWVL  253 (573)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~----~~~~~~~~~h~~~V~  253 (573)
                                           + ....+|...|.+++|+|++++|++|+.|+.|++||+.+    .+.+..+.+|...|.
T Consensus        60 ---------------------~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~  117 (416)
T 2pm9_A           60 ---------------------P-IASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK  117 (416)
T ss_dssp             ---------------------C-SCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC
T ss_pred             ---------------------E-EEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE
Confidence                                 0 01225889999999999999999999999999999987    357788899999999


Q ss_pred             EEEEcCC-CCeEEEEeeCCeEEEEECCCCc------eec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEE
Q psy2671         254 CIAWSPD-SKQLVSGCKNGVIHAWDSSTGK------QIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW  324 (573)
Q Consensus       254 ~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~------~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iw  324 (573)
                      +++|+|+ +++|++++.||.|++||+.++.      ...  ....+|...|.+++|.|.    .+.++++++.||.|++|
T Consensus       118 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~v~iw  193 (416)
T 2pm9_A          118 TVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQS----LAHVFASAGSSNFASIW  193 (416)
T ss_dssp             EEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSS----CTTEEEEESSSSCEEEE
T ss_pred             EEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCC----CCcEEEEEcCCCCEEEE
Confidence            9999998 8999999999999999998876      221  224678899999999873    25789999999999999


Q ss_pred             ECCCCeEEEEecCC------CccEEEEEECCCc--EEEEEeCCC---eEEEEeCCCCeeeEeccCCcceeeEEEeccCce
Q psy2671         325 DVILSQCVRVLTSH------TRSVTCIRWGGSG--LIYSASQDR---TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL  393 (573)
Q Consensus       325 d~~~~~~~~~~~~h------~~~v~~~~~~~~~--~l~s~s~d~---~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~  393 (573)
                      |+..++.+..+..|      ...|.+++|++++  .+++++.|+   .|++||                           
T Consensus       194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d---------------------------  246 (416)
T 2pm9_A          194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD---------------------------  246 (416)
T ss_dssp             ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE---------------------------
T ss_pred             ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe---------------------------
Confidence            99998888877765      5667777776553  455555554   555554                           


Q ss_pred             eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECC-C
Q psy2671         394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSP-D  471 (573)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp-~  471 (573)
                                                                          +++.......+. +|...|.+++|+| +
T Consensus       247 ----------------------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~s~~~  274 (416)
T 2pm9_A          247 ----------------------------------------------------LRNANTPLQTLNQGHQKGILSLDWCHQD  274 (416)
T ss_dssp             ----------------------------------------------------TTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred             ----------------------------------------------------CCCCCCCcEEeecCccCceeEEEeCCCC
Confidence                                                                444333344455 7888999999999 9


Q ss_pred             CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCCcccccccccC--------
Q psy2671         472 GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPG--------  542 (573)
Q Consensus       472 g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~--------  542 (573)
                      +++|++++.||.|++||.++++.+..+.+|...|++++|+|++ .+|++++.|+.|++|++.+.+.......        
T Consensus       275 ~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~  354 (416)
T 2pm9_A          275 EHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQES  354 (416)
T ss_dssp             SSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------
T ss_pred             CCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCC
Confidence            9999999999999999999999999999999999999999999 8999999999999999987664332211        


Q ss_pred             ---------------------------cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         543 ---------------------------HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       543 ---------------------------h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                                                 |...+.+++|+|||++|++++.|++|+||+
T Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~  411 (416)
T 2pm9_A          355 ETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITN  411 (416)
T ss_dssp             ------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred             cccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence                                       677888999999999999999999999997

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=2.2e-44  Score=354.29  Aligned_cols=302  Identities=23%  Similarity=0.392  Sum_probs=233.0

Q ss_pred             cccCCCccccEEEEEE-----cC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCC
Q psy2671         103 TSSMPGHAEAVISVKF-----SP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLN  176 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~-----s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (573)
                      ...|.||.++|++++|     ++ ++++|||||.|++|||||+.++.....                             
T Consensus        14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-----------------------------   64 (343)
T 2xzm_R           14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-----------------------------   64 (343)
T ss_dssp             EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-----------------------------
T ss_pred             eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-----------------------------
Confidence            3467899999999999     77 999999999999999999875432100                             


Q ss_pred             ccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEE
Q psy2671         177 TEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA  256 (573)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~  256 (573)
                                         ...+...+.||...|.+++|+|++.++++|+.|++|++||+.+++.+..+.+|...|.+++
T Consensus        65 -------------------~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~  125 (343)
T 2xzm_R           65 -------------------FGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVA  125 (343)
T ss_dssp             -------------------SEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred             -------------------cccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence                               0001124568999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEeccccc-----CCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHL-----NHQCRRFASSGKDGAIRIWDVILSQ  330 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~-----~~~~~~l~s~~~dg~v~iwd~~~~~  330 (573)
                      |+|++++|++|+.|++|++||+....... ....+|...|.++.|.|...     .+.+.++++++.||+|++||. ..+
T Consensus       126 ~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~  204 (343)
T 2xzm_R          126 FSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQ  204 (343)
T ss_dssp             ECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTE
T ss_pred             ECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCc
Confidence            99999999999999999999997433221 12347889999999988531     122357888888888888883 445


Q ss_pred             EEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         331 CVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       331 ~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      ....+.+|...|.+++|++++ .|++|+.|++|++||+.                                         
T Consensus       205 ~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~-----------------------------------------  243 (343)
T 2xzm_R          205 IRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL-----------------------------------------  243 (343)
T ss_dssp             EEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS-----------------------------------------
T ss_pred             eeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC-----------------------------------------
Confidence            556667777777777776655 45566666666666542                                         


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG  489 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~  489 (573)
                                                            ........+ .+...|.+++|+|++++++++ .|+.|++||.
T Consensus       244 --------------------------------------~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~  283 (343)
T 2xzm_R          244 --------------------------------------NLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNL  283 (343)
T ss_dssp             --------------------------------------CCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEES
T ss_pred             --------------------------------------CCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEe
Confidence                                                  111111111 123459999999999988755 5888999999


Q ss_pred             CCCeEEE--eec-----------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         490 RIGKFIT--TLR-----------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       490 ~~~~~~~--~~~-----------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      .+++...  .+.           +|...|++++|+|+|++||+|+.||+|++|++.++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          284 MTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             SSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred             CCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence            8765433  333           68888999999999999999999999999998765

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=6.3e-45  Score=356.79  Aligned_cols=282  Identities=17%  Similarity=0.259  Sum_probs=233.0

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-----------CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-----------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI  273 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-----------~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i  273 (573)
                      .|...|.+++|+|||++|++++ |+++++||...           .........|...|.+++|+|++ +|++|+.||+|
T Consensus        28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v  105 (344)
T 4gqb_B           28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV  105 (344)
T ss_dssp             SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred             cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence            5777899999999999999887 77888887321           00111122356779999999985 68899999999


Q ss_pred             EEEECCCCceec---ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC
Q psy2671         274 HAWDSSTGKQIG---QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS  350 (573)
Q Consensus       274 ~vwd~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~  350 (573)
                      ++||+++++.+.   ....+|...|.+++|.|     ++++|++++.|++|++||+.+++++..+.+|...|.+++|+++
T Consensus       106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-----dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~  180 (344)
T 4gqb_B          106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLS-----SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPH  180 (344)
T ss_dssp             EEEEECTTSSCEEEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSS
T ss_pred             EEEeccCCCceeEeeccccCCCCCEEEEEECC-----CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCC
Confidence            999999886542   23458999999999976     6789999999999999999999999999999999999999876


Q ss_pred             c--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         351 G--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       351 ~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      +  .+++++.|++|++||+++++....+.                                                   
T Consensus       181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---------------------------------------------------  209 (344)
T 4gqb_B          181 KDSVFLSCSEDNRILLWDTRCPKPASQIG---------------------------------------------------  209 (344)
T ss_dssp             CTTEEEEEETTSCEEEEETTSSSCEEECC---------------------------------------------------
T ss_pred             CCCceeeeccccccccccccccceeeeee---------------------------------------------------
Confidence            5  67888888888888887654332221                                                   


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM  507 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~  507 (573)
                                                 ...|...+.+++|+| ++++|++|+.||+|++||.++++.+.++.+|...|++
T Consensus       210 ---------------------------~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~  262 (344)
T 4gqb_B          210 ---------------------------CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTG  262 (344)
T ss_dssp             -------------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEE
T ss_pred             ---------------------------cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEE
Confidence                                       112334578999998 4678999999999999999999999999999999999


Q ss_pred             EEECCCC-CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE-EEEeeCCCcEEEcc
Q psy2671         508 VAWSSDS-RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLWQ  572 (573)
Q Consensus       508 v~~s~dg-~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~-l~s~~~d~~i~iw~  572 (573)
                      ++|+|++ ++||+|+.|++|+|||++++++. .+.+|.+.|++++|+|+++. |+|+|.|++|++|+
T Consensus       263 v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~  328 (344)
T 4gqb_B          263 LVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV  328 (344)
T ss_dssp             EEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred             EEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence            9999998 58999999999999999988765 46899999999999999875 67999999999996

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.3e-44  Score=352.83  Aligned_cols=300  Identities=20%  Similarity=0.292  Sum_probs=227.7

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      ..|...|.+++|+|||++|++++ |+++|+||.....  +..          ...             ....        
T Consensus        27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~--~~~----------~~~-------------~~~~--------   72 (344)
T 4gqb_B           27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWL--FKD----------PCA-------------APNE--------   72 (344)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEE--ESS----------GGG-------------TTCG--------
T ss_pred             ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeee--ecc----------ccc-------------cCCc--------
Confidence            35788899999999999999888 8899999853210  000          000             0000        


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE----EecCCCCcEEEEEEcCCCC
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF----KCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~----~~~~h~~~V~~v~~s~dg~  262 (573)
                                ..+ .....|...|.+++|+|++ .|++|+.||+|+|||+.+++.+.    ...+|...|++++|+|+|+
T Consensus        73 ----------~~~-~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~  140 (344)
T 4gqb_B           73 ----------GFC-SAGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT  140 (344)
T ss_dssp             ----------GGC-SEEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS
T ss_pred             ----------cee-eeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC
Confidence                      000 0111356789999999986 68899999999999999876543    3458999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCc
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTR  340 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~  340 (573)
                      +|++|+.|++|++||+++++.+ ..+.+|...|.++.|.|.    ....|++++.|++|++||+.++++...+.  .|..
T Consensus       141 ~l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~~V~~~~~~~~----~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~  215 (344)
T 4gqb_B          141 QAVSGSKDICIKVWDLAQQVVL-SSYRAHAAQVTCVAASPH----KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY  215 (344)
T ss_dssp             EEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECSS----CTTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred             EEEEEeCCCeEEEEECCCCcEE-EEEcCcCCceEEEEecCC----CCCceeeeccccccccccccccceeeeeecceeec
Confidence            9999999999999999998766 467899999999999773    23578999999999999999988877664  3444


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      .+.+++|++++                                                                     
T Consensus       216 ~~~~~~~~p~~---------------------------------------------------------------------  226 (344)
T 4gqb_B          216 LPTSLAWHPQQ---------------------------------------------------------------------  226 (344)
T ss_dssp             CEEEEEECSSC---------------------------------------------------------------------
T ss_pred             cceeeeecCCC---------------------------------------------------------------------
Confidence            56666665432                                                                     


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                              +.++++|+.||+|++||+++. ..+..+.+|...|++++|+|++ ++||+|+.|++|+|||.++++.+ .+.
T Consensus       227 --------~~~l~sg~~dg~v~~wd~~~~-~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~  296 (344)
T 4gqb_B          227 --------SEVFVFGDENGTVSLVDTKST-SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQ  296 (344)
T ss_dssp             --------TTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EEC
T ss_pred             --------CcceEEeccCCcEEEEECCCC-cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEc
Confidence                    234444555555555554433 2344567788899999999998 58999999999999999998754 578


Q ss_pred             CCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccc
Q psy2671         500 GHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~  536 (573)
                      +|...|++++|+|+++ +|+++|.|++|++|++.+...
T Consensus       297 ~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~  334 (344)
T 4gqb_B          297 AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL  334 (344)
T ss_dssp             CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred             CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence            9999999999999986 577999999999999977543

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-44  Score=366.17  Aligned_cols=322  Identities=19%  Similarity=0.340  Sum_probs=284.4

Q ss_pred             CCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEEC----CCCe------eeEEecC----------CCCcEEEEEEcCCCCe
Q psy2671         205 GHAEAVISVKFSPNGR-SLASGSGDTTVRFWDV----TTQT------PLFKCEG----------HKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~----~~~~------~~~~~~~----------h~~~V~~v~~s~dg~~  263 (573)
                      .|.+.|.+++|+|+|+ +||+|+.|+.|++||+    .+++      ....+..          |...|.+++|+|++++
T Consensus        43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  122 (425)
T 1r5m_A           43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS  122 (425)
T ss_dssp             EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred             eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence            4668999999999999 9999999999999999    8877      4444443          6889999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc--
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS--  341 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~--  341 (573)
                      |++|+.||.|++|| .+++.+ ..+.+|...|.++.|.|     +++++++++.||.|++||+.+++....+..+...  
T Consensus       123 l~~~~~dg~i~i~~-~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  195 (425)
T 1r5m_A          123 IVTGVENGELRLWN-KTGALL-NVLNFHRAPIVSVKWNK-----DGTHIISMDVENVTILWNVISGTVMQHFELKETGGS  195 (425)
T ss_dssp             EEEEETTSCEEEEE-TTSCEE-EEECCCCSCEEEEEECT-----TSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred             EEEEeCCCeEEEEe-CCCCee-eeccCCCccEEEEEECC-----CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence            99999999999999 445444 45678999999999977     5678999999999999999999998888888776  


Q ss_pred             -------------EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         342 -------------VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       342 -------------v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                                   +.++.|.+++.+++++.|+.|++|++.++.....+.+|...+..++++                   
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~-------------------  256 (425)
T 1r5m_A          196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN-------------------  256 (425)
T ss_dssp             ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-------------------
T ss_pred             ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-------------------
Confidence                         889999999999999999999999999998888888998888888776                   


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                                        |++.++++++.|+.|++||+.+.. ....+.+|...|.+++|+|++ ++++++.||.|++||
T Consensus       257 ------------------~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d  316 (425)
T 1r5m_A          257 ------------------DTNKLLLSASDDGTLRIWHGGNGN-SQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWS  316 (425)
T ss_dssp             ------------------TTTTEEEEEETTSCEEEECSSSBS-CSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEE
T ss_pred             ------------------CCCCEEEEEcCCCEEEEEECCCCc-cceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEE
Confidence                              457799999999999999987653 455667899999999999999 999999999999999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc--------------------ccccccCcCC--C
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--------------------IEQDLPGHGD--E  546 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~--------------------~~~~l~~h~~--~  546 (573)
                      .++++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++                    .+..+.+|..  .
T Consensus       317 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  396 (425)
T 1r5m_A          317 LKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDY  396 (425)
T ss_dssp             TTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCC
T ss_pred             CCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCc
Confidence            99999999999999999999999999999999999999999999888                    7888999976  9


Q ss_pred             EEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         547 VYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       547 v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |++++|+|++++|++++.||.|++|+
T Consensus       397 v~~~~~s~~~~~l~~~~~dg~i~iw~  422 (425)
T 1r5m_A          397 IFDLSWNCAGNKISVAYSLQEGSVVA  422 (425)
T ss_dssp             EEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred             eEEEEccCCCceEEEEecCceEEEEe
Confidence            99999999999999999999999997

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=8e-45  Score=358.97  Aligned_cols=291  Identities=19%  Similarity=0.266  Sum_probs=223.6

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeC------CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSG------DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~------D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      .+|+..|.+|+|||||++|||||.      |++|++|+..++.+...                                 
T Consensus        39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~---------------------------------   85 (357)
T 4g56_B           39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES---------------------------------   85 (357)
T ss_dssp             -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG---------------------------------
T ss_pred             ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee---------------------------------
Confidence            469999999999999999999998      66788887766543210                                 


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee----EEecCCCCcEEEEE
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL----FKCEGHKHWVLCIA  256 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~  256 (573)
                                        ......+|...|.+++|+|+++ +++++.|++|+|||+.+++..    ....+|...|.+++
T Consensus        86 ------------------~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~  146 (357)
T 4g56_B           86 ------------------LCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLS  146 (357)
T ss_dssp             ------------------GCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEE
T ss_pred             ------------------EecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEE
Confidence                              0011236888999999999986 556789999999999887643    34458999999999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  336 (573)
                      |+|++++|++|+.|+.|++||+++++.+ ..+.+|...|.+++|.|.    ....+++++.||+|++||+.++++...+.
T Consensus       147 ~spdg~~l~sgs~dg~v~iwd~~~~~~~-~~~~~h~~~v~~v~~s~~----~~~~~~s~~~dg~v~~wd~~~~~~~~~~~  221 (357)
T 4g56_B          147 VFSDGTQAVSGGKDFSVKVWDLSQKAVL-KSYNAHSSEVNCVAACPG----KDTIFLSCGEDGRILLWDTRKPKPATRID  221 (357)
T ss_dssp             ECSSSSEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTT----CSSCEEEEETTSCEEECCTTSSSCBCBCC
T ss_pred             ECCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCCCCCEEEEEEccC----CCceeeeeccCCceEEEECCCCceeeeee
Confidence            9999999999999999999999988765 456889999999999763    22478999999999999999887665543


Q ss_pred             --CCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         337 --SHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       337 --~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                        .|...+.+++|++++  .+++|+.|+.|++||++                                            
T Consensus       222 ~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~--------------------------------------------  257 (357)
T 4g56_B          222 FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK--------------------------------------------  257 (357)
T ss_dssp             CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS--------------------------------------------
T ss_pred             eccccccccchhhhhcccceEEEeecccceeEEECC--------------------------------------------
Confidence              456667777776542  34455555555555543                                            


Q ss_pred             hhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCCcEEEEeCCC
Q psy2671         413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg~i~lwd~~~  491 (573)
                                                         +. .....+.+|...|++++|+|++ ++||+|+.||+|+|||.++
T Consensus       258 -----------------------------------~~-~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~  301 (357)
T 4g56_B          258 -----------------------------------NP-DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF  301 (357)
T ss_dssp             -----------------------------------CG-GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred             -----------------------------------CC-cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence                                               32 2234556778889999999987 5799999999999999999


Q ss_pred             CeEEEeecCCcceEEEEEECC-CCCEEEEEeCCCcEEEEeCCccc
Q psy2671         492 GKFITTLRGHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      ++.+..+ +|...|++++|+| |+++||++|.|++|++|++.+..
T Consensus       302 ~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          302 SEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             CEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred             CcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence            9877655 7999999999998 89999999999999999996643

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.2e-44  Score=398.56  Aligned_cols=365  Identities=21%  Similarity=0.325  Sum_probs=307.1

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..+.+|.++|.+++|||++++||+|+.||+|+|||+.++.++.                                     
T Consensus         7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-------------------------------------   49 (814)
T 3mkq_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-------------------------------------   49 (814)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-------------------------------------
T ss_pred             eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-------------------------------------
Confidence            3567899999999999999999999999999999998775432                                     


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                        .+.+|.++|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++
T Consensus        50 ------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~  111 (814)
T 3mkq_A           50 ------------------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPY  111 (814)
T ss_dssp             ------------------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSE
T ss_pred             ------------------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCE
Confidence                              23478999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSV  342 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v  342 (573)
                      |++++.||.|++||+.++......+.+|...|.+++|.|.    ++..+++++.||+|++||+..+.....+..+. ..+
T Consensus       112 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~----~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v  187 (814)
T 3mkq_A          112 VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK----DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGV  187 (814)
T ss_dssp             EEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT----EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCC
T ss_pred             EEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC----CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCE
Confidence            9999999999999998875555677889999999999872    34689999999999999998877766665544 889


Q ss_pred             EEEEECC--Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         343 TCIRWGG--SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       343 ~~~~~~~--~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .+++|++  ++ .+++++.|+.|++||..++.....+.+|...+..++++                              
T Consensus       188 ~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~------------------------------  237 (814)
T 3mkq_A          188 NYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH------------------------------  237 (814)
T ss_dssp             CEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC------------------------------
T ss_pred             EEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc------------------------------
Confidence            9999987  55 79999999999999999999999999998888888776                              


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC--EEEEeeCCCcEEEEeCCCCe----
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGK----  493 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~--~las~s~dg~i~lwd~~~~~----  493 (573)
                             |++.++++++.||.|++||+.+.. ....+..|...+.+++|+|+|.  ++++++ |+.+.+|+...+.    
T Consensus       238 -------~~~~~l~~~~~dg~v~vwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  308 (814)
T 3mkq_A          238 -------PTLPIIISGSEDGTLKIWNSSTYK-VEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLS  308 (814)
T ss_dssp             -------SSSSEEEEEETTSCEEEEETTTCS-EEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEE
T ss_pred             -------CCCCEEEEEeCCCeEEEEECCCCc-EEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeE
Confidence                   557899999999999999987653 4566777888999999999987  455554 6678888765322    


Q ss_pred             ------EEE---------------------------------eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         494 ------FIT---------------------------------TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       494 ------~~~---------------------------------~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                            .+.                                 .+..+...+.+++|+|+|++|++++ |+.+.+|++...
T Consensus       309 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~  387 (814)
T 3mkq_A          309 LDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW  387 (814)
T ss_dssp             ECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT
T ss_pred             ECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc
Confidence                  111                                 1122334578899999999999998 899999997543


Q ss_pred             cccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..     .+.+.+.+++|+||+++|++++.|+.|++|+
T Consensus       388 ~~-----~~~~~i~~~~~spdg~~la~~~~~g~v~l~~  420 (814)
T 3mkq_A          388 RN-----KAFGKCQDFVWGPDSNSYALIDETGQIKYYK  420 (814)
T ss_dssp             EE-----EEEEECSEEEECTTSSCEEEECTTCCEEEEE
T ss_pred             cc-----cCCCceEEEEEeCCCCeEEEEeCCCcEEEEE
Confidence            22     2345677889999999999999999999885

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-44  Score=363.28  Aligned_cols=338  Identities=18%  Similarity=0.309  Sum_probs=279.9

Q ss_pred             ccccEEEEEEcCCCC-eeEEeeCCCcEEEeec----cCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         109 HAEAVISVKFSPNGR-SLASGSGDTTVRFWDV----TTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       109 H~~~V~~l~~s~~~~-~lat~s~D~~vrvWd~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      |.++|.+++|+|+++ +||+|+.|++|+|||+    .+++++++....                                
T Consensus        44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~--------------------------------   91 (425)
T 1r5m_A           44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTII--------------------------------   91 (425)
T ss_dssp             ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEE--------------------------------
T ss_pred             ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccc--------------------------------
Confidence            669999999999999 9999999999999999    777643221000                                


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                             ..+...........+|.+.|.+++|+|++++|++|+.|+.|++|| .++..+..+.+|...|.+++|+|++++
T Consensus        92 -------~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~  163 (425)
T 1r5m_A           92 -------AELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTH  163 (425)
T ss_dssp             -------EEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSE
T ss_pred             -------ccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCE
Confidence                   000000000112345788999999999999999999999999999 667788889999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCccc---------------EEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW---------------ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      |++++.|+.|++||+.+++.+. .+..+...               +.++.|.|      ...+++++.+|.|++||+..
T Consensus       164 l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~i~~~d~~~  236 (425)
T 1r5m_A          164 IISMDVENVTILWNVISGTVMQ-HFELKETGGSSINAENHSGDGSLGVDVEWVD------DDKFVIPGPKGAIFVYQITE  236 (425)
T ss_dssp             EEEEETTCCEEEEETTTTEEEE-EECCC---------------CCCBSCCEEEE------TTEEEEECGGGCEEEEETTC
T ss_pred             EEEEecCCeEEEEECCCCcEEE-EeeccccCccceeeccccCCcceeeEEEEcC------CCEEEEEcCCCeEEEEEcCC
Confidence            9999999999999999887653 33444443               66777765      24689999999999999999


Q ss_pred             CeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         329 SQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       329 ~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      ++....+..|...|.+++|++++ .+++++.|+.|++|+++++.....+.+|...+..++++                  
T Consensus       237 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~------------------  298 (425)
T 1r5m_A          237 KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWV------------------  298 (425)
T ss_dssp             SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEE------------------
T ss_pred             CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEEC------------------
Confidence            98888899999999999999876 79999999999999999998888888898888888776                  


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW  487 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lw  487 (573)
                                         |++ .+++++.|+.|++||+.+.. .+..+..|...|.+++|+|++++|++++.||.|++|
T Consensus       299 -------------------~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~  357 (425)
T 1r5m_A          299 -------------------GDD-KVISCSMDGSVRLWSLKQNT-LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY  357 (425)
T ss_dssp             -------------------TTT-EEEEEETTSEEEEEETTTTE-EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             -------------------CCC-EEEEEeCCCcEEEEECCCCc-EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence                               345 89999999999999997654 456677888999999999999999999999999999


Q ss_pred             eCCCCe--------------------EEEeecCCcc--eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         488 DGRIGK--------------------FITTLRGHVQ--AVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       488 d~~~~~--------------------~~~~~~~h~~--~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      |.++++                    .+..+.+|..  .|++++|+|++++|++++.|+.|++|+++
T Consensus       358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          358 DLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             ECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred             ECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence            999888                    8899999976  99999999999999999999999999985

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.1e-43  Score=345.52  Aligned_cols=290  Identities=27%  Similarity=0.457  Sum_probs=244.7

Q ss_pred             cCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCC-----CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         201 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTT-----QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~-----~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      .++.||.+.|.+++|+|++ ++|++|+.|++|++|++.+     +.++..+.+|...|.+++|+|+|++|++|+.|++|+
T Consensus        11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~   90 (319)
T 3frx_A           11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR   90 (319)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence            4578999999999999965 8999999999999999864     345677899999999999999999999999999999


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEE
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY  354 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~  354 (573)
                      +||+.+++.+ ..+.+|...|.++.|.|     ++.++++++.|++|++||+. ++++..+.+|...|.++.+.+.... 
T Consensus        91 ~wd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~-  162 (319)
T 3frx_A           91 LWDVATGETY-QRFVGHKSDVMSVDIDK-----KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA-  162 (319)
T ss_dssp             EEETTTTEEE-EEEECCSSCEEEEEECT-----TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred             EEECCCCCee-EEEccCCCcEEEEEEcC-----CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC-
Confidence            9999998765 45779999999999876     56789999999999999986 5577788899999999988764210 


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                                                                                             .+++..+++
T Consensus       163 -----------------------------------------------------------------------~~~~~~l~s  171 (319)
T 3frx_A          163 -----------------------------------------------------------------------DDDSVTIIS  171 (319)
T ss_dssp             --------------------------------------------------------------------------CCEEEE
T ss_pred             -----------------------------------------------------------------------CCCccEEEE
Confidence                                                                                   012446677


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg  514 (573)
                      ++.|++|++||+++.. ....+.+|...|.+++|+|+|++|++|+.||+|++||.++++.+..+..+ ..|.+++|+|++
T Consensus       172 ~~~d~~i~~wd~~~~~-~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~  249 (319)
T 3frx_A          172 AGNDKMVKAWNLNQFQ-IEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNR  249 (319)
T ss_dssp             EETTSCEEEEETTTTE-EEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSS
T ss_pred             EeCCCEEEEEECCcch-hheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCC
Confidence            7777777777766532 34556789999999999999999999999999999999999999888765 679999999999


Q ss_pred             CEEEEEeCCCcEEEEeCCcccccccc--------cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         515 RLLVSGSADSTLKVWNMKTKKIEQDL--------PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ~~las~s~D~~v~vwd~~~~~~~~~l--------~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .+|++++.+ .+++|++..+.....+        ..|...+.+++|+|||++|++|+.|++|++|+
T Consensus       250 ~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd  314 (319)
T 3frx_A          250 YWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ  314 (319)
T ss_dssp             SEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence            999988755 5999999876654433        24567899999999999999999999999997

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-44  Score=348.61  Aligned_cols=300  Identities=25%  Similarity=0.415  Sum_probs=232.0

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...|.+|.++|++++|+|+  +||||+.|++|+|||+.++.....                                   
T Consensus         7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~-----------------------------------   49 (330)
T 2hes_X            7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLI-----------------------------------   49 (330)
T ss_dssp             EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEE-----------------------------------
T ss_pred             ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEE-----------------------------------
Confidence            3467799999999999987  999999999999999876421000                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-------CeeeEEecCCCCcEEEE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-------QTPLFKCEGHKHWVLCI  255 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-------~~~~~~~~~h~~~V~~v  255 (573)
                               .       .....+|.+.|.+++|+|++++||+|+.|++|+|||+..       ...+..+.+|...|.++
T Consensus        50 ---------~-------~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v  113 (330)
T 2hes_X           50 ---------D-------VLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGV  113 (330)
T ss_dssp             ---------E-------EECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEE
T ss_pred             ---------E-------EEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEE
Confidence                     0       001124999999999999999999999999999999853       34567788999999999


Q ss_pred             EEcCCCCeEEEEeeCCeEEEEECCCC-c--eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--e
Q psy2671         256 AWSPDSKQLVSGCKNGVIHAWDSSTG-K--QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--Q  330 (573)
Q Consensus       256 ~~s~dg~~l~sgs~dg~i~vwd~~~~-~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~  330 (573)
                      +|+|+|++|++|+.|++|++||+... .  .....+.+|...|.++.|.|     ++++|++++.|++|++||...+  +
T Consensus       114 ~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-----~~~~l~s~s~D~~i~iW~~~~~~~~  188 (330)
T 2hes_X          114 AWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-----SEALLASSSYDDTVRIWKDYDDDWE  188 (330)
T ss_dssp             EECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-----SSSEEEEEETTSCEEEEEEETTEEE
T ss_pred             EECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-----CCCEEEEEcCCCeEEEEECCCCCee
Confidence            99999999999999999999999533 2  22245678999999999987     5679999999999999998766  5


Q ss_pred             EEEEecCCCccEEEEEECCC--c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         331 CVRVLTSHTRSVTCIRWGGS--G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       331 ~~~~~~~h~~~v~~~~~~~~--~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      ++..+.+|...|.+++|+++  + .+++++.|++|++|++..+...                                  
T Consensus       189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~----------------------------------  234 (330)
T 2hes_X          189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED----------------------------------  234 (330)
T ss_dssp             EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT----------------------------------
T ss_pred             EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc----------------------------------
Confidence            77888999999999999886  4 6889999999999986432100                                  


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKL  486 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~l  486 (573)
                                           +.           ..|      .....+.+ |...|.+++|++++ +|++++.||+|++
T Consensus       235 ---------------------~~-----------~~~------~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~i  275 (330)
T 2hes_X          235 ---------------------DQ-----------QEW------VCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAV  275 (330)
T ss_dssp             ---------------------SC-----------EEE------EEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEE
T ss_pred             ---------------------cc-----------cee------EEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEE
Confidence                                 00           000      01112223 78889999999765 8999999999999


Q ss_pred             EeCCCCe--EEE-eecCCcc-eEEEEEECC--CCCEEEEEeCCCcEEEEeCCc
Q psy2671         487 WDGRIGK--FIT-TLRGHVQ-AVYMVAWSS--DSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       487 wd~~~~~--~~~-~~~~h~~-~v~~v~~s~--dg~~las~s~D~~v~vwd~~~  533 (573)
                      ||..+++  .+. .+.+|.. .|++++|+|  ++++||+|+.|++|++|+++.
T Consensus       276 w~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          276 YEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             EEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             EEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence            9988774  333 3467877 899999999  789999999999999999864

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=2.8e-43  Score=341.89  Aligned_cols=287  Identities=34%  Similarity=0.642  Sum_probs=251.1

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.+.|.+++|+|++++|++|+.|+.|++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++||+++
T Consensus        17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~   96 (312)
T 4ery_A           17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS   96 (312)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence            45679999999999999999999999999999999999998889999999999999999999999999999999999998


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD  359 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d  359 (573)
                      ++.+ ..+.+|...|.++.|.|     +++.+++++.|+.|++||+.+++++..+..|...|.+++|++++ .+++++.|
T Consensus        97 ~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  170 (312)
T 4ery_A           97 GKCL-KTLKGHSNYVFCCNFNP-----QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD  170 (312)
T ss_dssp             CCEE-EEEECCSSCEEEEEECS-----SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             CcEE-EEEcCCCCCEEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence            8765 45678999999999877     56789999999999999999999988999999999999988765 67777778


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      +.|++||++++.....                                                                
T Consensus       171 ~~i~~wd~~~~~~~~~----------------------------------------------------------------  186 (312)
T 4ery_A          171 GLCRIWDTASGQCLKT----------------------------------------------------------------  186 (312)
T ss_dssp             SCEEEEETTTCCEEEE----------------------------------------------------------------
T ss_pred             CcEEEEECCCCceeeE----------------------------------------------------------------
Confidence            8888887765432211                                                                


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE---EEEECCCCCE
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY---MVAWSSDSRL  516 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~---~v~~s~dg~~  516 (573)
                                     ....+...+.+++|+|++++|++++.||.|++||.++++.+..+.+|.....   .....+++.+
T Consensus       187 ---------------~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (312)
T 4ery_A          187 ---------------LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW  251 (312)
T ss_dssp             ---------------ECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred             ---------------EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence                           1123345688999999999999999999999999999999999988865432   2334478899


Q ss_pred             EEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee--CCCcEEEcc
Q psy2671         517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG--KDKVLRLWQ  572 (573)
Q Consensus       517 las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~--~d~~i~iw~  572 (573)
                      |++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|+++.|++++  .|++|++|+
T Consensus       252 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~  309 (312)
T 4ery_A          252 IVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK  309 (312)
T ss_dssp             EEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred             EEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence            99999999999999999999999999999999999999999999987  699999997

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=7.7e-43  Score=338.77  Aligned_cols=293  Identities=30%  Similarity=0.543  Sum_probs=251.1

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ....+.||.+.|++++|+|++++||+|+.|++|+|||..+++..                                    
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~------------------------------------   58 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE------------------------------------   58 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE------------------------------------
T ss_pred             eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc------------------------------------
Confidence            34567899999999999999999999999999999998776432                                    


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                         ..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++
T Consensus        59 -------------------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~  119 (312)
T 4ery_A           59 -------------------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS  119 (312)
T ss_dssp             -------------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred             -------------------hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence                               1245799999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTR  340 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~  340 (573)
                      ++|++|+.|+.|++||+++++.+ ..+.+|...|.++.|.|     +++.+++++.||.|++||+.+++.+..+ ..+..
T Consensus       120 ~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~  193 (312)
T 4ery_A          120 NLIVSGSFDESVRIWDVKTGKCL-KTLPAHSDPVSAVHFNR-----DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP  193 (312)
T ss_dssp             SEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCC
T ss_pred             CEEEEEeCCCcEEEEECCCCEEE-EEecCCCCcEEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCC
Confidence            99999999999999999988765 45678999999999876     5678999999999999999998877665 45667


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .+.+++|++++ .+++++.|+.|++||++++.....+.+|....                                    
T Consensus       194 ~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------------------------------  237 (312)
T 4ery_A          194 PVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK------------------------------------  237 (312)
T ss_dssp             CEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS------------------------------------
T ss_pred             ceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce------------------------------------
Confidence            89999998876 68888899999999988776655544432110                                    


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                               ..+......+++.+|++|+.||.|++||.++++.+..+.
T Consensus       238 -----------------------------------------~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~  276 (312)
T 4ery_A          238 -----------------------------------------YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQ  276 (312)
T ss_dssp             -----------------------------------------SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEEC
T ss_pred             -----------------------------------------EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhh
Confidence                                                     001122234678899999999999999999999999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEe--CCCcEEEEeCC
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGS--ADSTLKVWNMK  532 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s--~D~~v~vwd~~  532 (573)
                      +|...|.+++|+|++++|++++  .|++|++|+..
T Consensus       277 ~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          277 GHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             CCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             ccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            9999999999999999999987  69999999864

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.3e-42  Score=341.36  Aligned_cols=298  Identities=26%  Similarity=0.457  Sum_probs=248.7

Q ss_pred             cccCCCccccEEEEEEcCC-CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         103 TSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~-~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      ..+|.||.++|++|+|+|+ +++|||||.|++|||||+.++.....                                  
T Consensus        31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~----------------------------------   76 (340)
T 4aow_A           31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG----------------------------------   76 (340)
T ss_dssp             EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE----------------------------------
T ss_pred             EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc----------------------------------
Confidence            4568899999999999998 68999999999999999976542210                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCC
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg  261 (573)
                                      .+...+.||...|.+++|+|+|++|++|+.|+.|++|+............+...+..+.+++++
T Consensus        77 ----------------~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (340)
T 4aow_A           77 ----------------IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN  140 (340)
T ss_dssp             ----------------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred             ----------------eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC
Confidence                            0113456899999999999999999999999999999999998888888888999999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      .+|++|+.|+.+++||............+|...+..+.|.+.   .....+++++.|+.|++||+..++....+.+|...
T Consensus       141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~  217 (340)
T 4aow_A          141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN---SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGY  217 (340)
T ss_dssp             SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC---SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred             ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC---CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCc
Confidence            999999999999999998776665667789999999998763   23457899999999999999999999999999999


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |.+++|++++ .+++|+.|++|++||++++..+..                                             
T Consensus       218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~---------------------------------------------  252 (340)
T 4aow_A          218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT---------------------------------------------  252 (340)
T ss_dssp             EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE---------------------------------------------
T ss_pred             EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee---------------------------------------------
Confidence            9999998775 677788888888887765433211                                             


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee--
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL--  498 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~--  498 (573)
                                                         +. +...|.++.|+|++.++ +++.|+.|++||.+++..+..+  
T Consensus       253 -----------------------------------~~-~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~  295 (340)
T 4aow_A          253 -----------------------------------LD-GGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQ  295 (340)
T ss_dssp             -----------------------------------EE-CSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECC
T ss_pred             -----------------------------------ec-CCceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccc
Confidence                                               11 23458889999987655 4556999999999888766554  


Q ss_pred             -------cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         499 -------RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       499 -------~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                             .+|...|++++|+|||++||+|+.||.|+|||+++|+
T Consensus       296 ~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          296 EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             C-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             cceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence                   3688899999999999999999999999999998875

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=3.7e-43  Score=352.22  Aligned_cols=314  Identities=26%  Similarity=0.454  Sum_probs=250.2

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      +|.+.|.+++|+|||++||+|+ |++++||++.+++.+..........                   .          . 
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~-------------------~----------~-  110 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAAN-------------------K----------D-  110 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------------------
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccc-------------------c----------c-
Confidence            5999999999999999999987 7899999999887654432210000                   0          0 


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg  267 (573)
                             +..........+...|.+++|+|+|++||+|+.|++|+|||+.+++.+..+.+|...|.+++|+|++++|++|
T Consensus       111 -------~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~  183 (393)
T 1erj_A          111 -------PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG  183 (393)
T ss_dssp             -----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             -------cccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEe
Confidence                   0000001123455679999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------cCCCc
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-------TSHTR  340 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~h~~  340 (573)
                      +.|++|++||+++++....  ..+...+.+++|.|    .+++++++++.||.|++||+.++..+..+       .+|..
T Consensus       184 s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~----~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~  257 (393)
T 1erj_A          184 SGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAVSP----GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD  257 (393)
T ss_dssp             ETTSEEEEEETTTTEEEEE--EECSSCEEEEEECS----TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred             cCCCcEEEEECCCCeeEEE--EEcCCCcEEEEEEC----CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC
Confidence            9999999999998876432  23556788888876    25689999999999999999988877666       57999


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|.+++|++++ .+++|+.|++|++||+++........                                          
T Consensus       258 ~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~------------------------------------------  295 (393)
T 1erj_A          258 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK------------------------------------------  295 (393)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEEC----------------------------------------------------
T ss_pred             CEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc------------------------------------------
Confidence            99999999887 79999999999999986542210000                                          


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                ..........+.+|...|.+++|+|++++|++|+.||.|++||.++++.+..+.
T Consensus       296 --------------------------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~  349 (393)
T 1erj_A          296 --------------------------TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ  349 (393)
T ss_dssp             -------------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             --------------------------CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC
Confidence                                      000011233456788999999999999999999999999999999999999999


Q ss_pred             CCcceEEEEEECC------CCCEEEEEeCCCcEEEEeCCc
Q psy2671         500 GHVQAVYMVAWSS------DSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       500 ~h~~~v~~v~~s~------dg~~las~s~D~~v~vwd~~~  533 (573)
                      +|...|.+++|++      ++++||+|+.|++|++|++..
T Consensus       350 ~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          350 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             CCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence            9999999999986      688999999999999999854

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=7.3e-43  Score=343.52  Aligned_cols=294  Identities=23%  Similarity=0.395  Sum_probs=238.9

Q ss_pred             cCCCCCCCcEEEEEE-----cC-CCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671         201 SSMPGHAEAVISVKF-----SP-NGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       201 ~~~~gh~~~V~~~~f-----sp-~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg~~l~sg  267 (573)
                      ..+.||.+.|++++|     +| ++++|++|+.|++|++||+.+.       .+...+.+|...|.+++|+|++.+|++|
T Consensus        15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~   94 (343)
T 2xzm_R           15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS   94 (343)
T ss_dssp             EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred             eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence            457799999999999     77 8999999999999999998753       4566789999999999999999999999


Q ss_pred             eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCccEEEE
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSHTRSVTCI  345 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~  345 (573)
                      +.|++|++||+++++.+ ..+.+|...|.+++|.|     +++++++++.|++|++||+.........  ..|...|.++
T Consensus        95 s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~v~~sp-----~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~  168 (343)
T 2xzm_R           95 SWDKTLRLWDLRTGTTY-KRFVGHQSEVYSVAFSP-----DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV  168 (343)
T ss_dssp             ETTSEEEEEETTSSCEE-EEEECCCSCEEEEEECS-----STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred             cCCCcEEEEECCCCcEE-EEEcCCCCcEEEEEECC-----CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence            99999999999998765 45678999999999987     5689999999999999998743322211  2566777777


Q ss_pred             EECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       346 ~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      +|++.+..                                                                    ....
T Consensus       169 ~~~~~~~~--------------------------------------------------------------------~~~~  180 (343)
T 2xzm_R          169 RYSPIMKS--------------------------------------------------------------------ANKV  180 (343)
T ss_dssp             EECCCCCS--------------------------------------------------------------------CSCC
T ss_pred             eecccccc--------------------------------------------------------------------cccc
Confidence            77654210                                                                    0001


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcce
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQA  504 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~  504 (573)
                      .|.+.++++++.|++|++||..  ......+.+|...|.+++|+|+|++|++|+.||.|++||+.. ......+. +...
T Consensus       181 ~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~  257 (343)
T 2xzm_R          181 QPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGST  257 (343)
T ss_dssp             CSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSC
T ss_pred             CCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCc
Confidence            2456789999999999999943  334556788999999999999999999999999999999854 33333332 3456


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc--ccc-----------CcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ--DLP-----------GHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~--~l~-----------~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      |.+++|+|++++++++ .|+.|++|++.+++...  .+.           +|...|++++|+|++++|++|+.||+|++|
T Consensus       258 v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w  336 (343)
T 2xzm_R          258 INQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTF  336 (343)
T ss_dssp             EEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEE
T ss_pred             EEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEE
Confidence            9999999999888755 58889999998765433  332           788899999999999999999999999999


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      +
T Consensus       337 ~  337 (343)
T 2xzm_R          337 S  337 (343)
T ss_dssp             E
T ss_pred             E
Confidence            6

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=9.1e-44  Score=391.47  Aligned_cols=393  Identities=19%  Similarity=0.283  Sum_probs=320.8

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+.+|..+|.+++|+|++++||+|+.||+|+|||+.+++++.                                    
T Consensus        48 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~------------------------------------   91 (814)
T 3mkq_A           48 VRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV------------------------------------   91 (814)
T ss_dssp             EEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE------------------------------------
T ss_pred             EEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE------------------------------------
Confidence            34566899999999999999999999999999999998875432                                    


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC-eeeEEecCCCCcEEEEEEcC-C
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-TPLFKCEGHKHWVLCIAWSP-D  260 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~-~~~~~~~~h~~~V~~v~~s~-d  260 (573)
                                         .+.+|.+.|.+++|+|++++|++++.|++|++||+.++ .....+.+|...|.+++|+| +
T Consensus        92 -------------------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~  152 (814)
T 3mkq_A           92 -------------------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD  152 (814)
T ss_dssp             -------------------EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTE
T ss_pred             -------------------EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCC
Confidence                               23479999999999999999999999999999999886 66677889999999999999 8


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      +..|++++.||.|++||+.++.........+...+..++|.|.   +++..+++++.||.|++||+.++++...+.+|..
T Consensus       153 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~  229 (814)
T 3mkq_A          153 PSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPL---PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS  229 (814)
T ss_dssp             EEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCS---TTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred             CCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEEC---CCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence            8999999999999999998876654444455578899998773   3567999999999999999999999999999999


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCce--eEEEEcCCCceeeCC---------
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYL--MRVEATSTGGFKYDP---------  408 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~~~~~~~~~~~~~~~---------  408 (573)
                      .|.+++|++++ .+++++.||.|++|+..++.....+..|...+..++++++..  ..+.....+...+..         
T Consensus       230 ~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (814)
T 3mkq_A          230 NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSL  309 (814)
T ss_dssp             CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEE
T ss_pred             CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEE
Confidence            99999999887 799999999999999999999999999999999999988753  222222221111110         


Q ss_pred             --CCch-------h-----------------------------hhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         409 --ANPE-------E-----------------------------SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       409 --~~~~-------~-----------------------------~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                        ....       .                             ............+|+|.++++++ ++.+.+|+.....
T Consensus       310 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~  388 (814)
T 3mkq_A          310 DPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR  388 (814)
T ss_dssp             CSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred             CCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccc
Confidence              0000       0                             00000112334578999999998 8999999975432


Q ss_pred             cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC---CEEEEEeCCCcEE
Q psy2671         451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS---RLLVSGSADSTLK  527 (573)
Q Consensus       451 ~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg---~~las~s~D~~v~  527 (573)
                      .      .+...+.+++|+|+|+++|+++.+|.|++|+        .+.+|...+.+++|+|+|   .+|++++.|++|+
T Consensus       389 ~------~~~~~i~~~~~spdg~~la~~~~~g~v~l~~--------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~  454 (814)
T 3mkq_A          389 N------KAFGKCQDFVWGPDSNSYALIDETGQIKYYK--------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVY  454 (814)
T ss_dssp             E------EEEEECSEEEECTTSSCEEEECTTCCEEEEE--------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEE
T ss_pred             c------cCCCceEEEEEeCCCCeEEEEeCCCcEEEEE--------CCCCccceEEcCCcCccceecceEEEEecCCEEE
Confidence            1      2345688999999999999999999999996        334577788899999998   6888999999999


Q ss_pred             EEeCCcccccccccCcCCCEEEEEEccCCCEEEEe------eCCCcEEEc
Q psy2671         528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG------GKDKVLRLW  571 (573)
Q Consensus       528 vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~------~~d~~i~iw  571 (573)
                      +||+.+++.+..+.+|..   .+.|+|||++|+++      +.++...+|
T Consensus       455 ~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~~  501 (814)
T 3mkq_A          455 FFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTLL  501 (814)
T ss_dssp             EECTTTCCEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEEE
T ss_pred             EEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEEE
Confidence            999999999888887764   89999999999999      666666565

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-43  Score=343.04  Aligned_cols=286  Identities=26%  Similarity=0.470  Sum_probs=225.4

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEe-cC-CCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKC-EG-HKHWVLCIAWSPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~-~~-h~~~V~~v~~s~dg~~l~sgs~dg~i~vw  276 (573)
                      ..+.+|.+.|++++|+|+  +||+|+.|++|++||+.++  +.+..+ .+ |...|.+++|+|++++|++|+.|++|++|
T Consensus         8 ~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw   85 (330)
T 2hes_X            8 KSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW   85 (330)
T ss_dssp             EEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             eeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence            456799999999999998  9999999999999999875  344445 44 99999999999999999999999999999


Q ss_pred             ECCCCc------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC----CeEEEEecCCCccEEEEE
Q psy2671         277 DSSTGK------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----SQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       277 d~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----~~~~~~~~~h~~~v~~~~  346 (573)
                      |++.+.      .....+.+|...|.+++|.|     ++++|++++.|++|++||+..    .+++..+.+|...|.+++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-----~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~  160 (330)
T 2hes_X           86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSN-----DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI  160 (330)
T ss_dssp             EC-------CCCEEEEEEC----CEEEEEECT-----TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred             EcccCcCccccceeEEEEcCCCCcEEEEEECC-----CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence            986431      12245679999999999987     578999999999999999943    245667788888888888


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      |++++ .+++++.|++|++|+..++.                                                      
T Consensus       161 ~~p~~~~l~s~s~D~~i~iW~~~~~~------------------------------------------------------  186 (330)
T 2hes_X          161 WHPSEALLASSSYDDTVRIWKDYDDD------------------------------------------------------  186 (330)
T ss_dssp             ECSSSSEEEEEETTSCEEEEEEETTE------------------------------------------------------
T ss_pred             ECCCCCEEEEEcCCCeEEEEECCCCC------------------------------------------------------
Confidence            87665 56677777777777643220                                                      


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEEEeCCCC--------eEE
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKLWDGRIG--------KFI  495 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~lwd~~~~--------~~~  495 (573)
                                              ...+..+.+|...|.+++|+|+  +.+|++|+.|++|++||.+.+        ...
T Consensus       187 ------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~  242 (330)
T 2hes_X          187 ------------------------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE  242 (330)
T ss_dssp             ------------------------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred             ------------------------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence                                    1223456688889999999998  779999999999999998654        345


Q ss_pred             EeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc--cc-ccccCcCC-CEEEEEEcc--CCCEEEEeeCCCcE
Q psy2671         496 TTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK--IE-QDLPGHGD-EVYAVDWAP--DGEKVASGGKDKVL  568 (573)
Q Consensus       496 ~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~--~~-~~l~~h~~-~v~~~~~s~--d~~~l~s~~~d~~i  568 (573)
                      ..+.+ |...|++++|++++ +||+++.|++|++|+..+++  .. ..+.+|.. .|.+++|+|  ++++|++||.|++|
T Consensus       243 ~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v  321 (330)
T 2hes_X          243 AILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV  321 (330)
T ss_dssp             EECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred             eecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence            55655 89999999999765 89999999999999997763  22 33467887 899999999  78999999999999


Q ss_pred             EEcc
Q psy2671         569 RLWQ  572 (573)
Q Consensus       569 ~iw~  572 (573)
                      ++|+
T Consensus       322 ~~W~  325 (330)
T 2hes_X          322 NFWS  325 (330)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            9997

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1e-43  Score=360.09  Aligned_cols=343  Identities=15%  Similarity=0.181  Sum_probs=278.2

Q ss_pred             cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEecee
Q psy2671         110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQA  189 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (573)
                      .+.+++++|+|++++|++|+.|++|++||+.++...                                            
T Consensus        56 ~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~--------------------------------------------   91 (420)
T 3vl1_A           56 VDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS--------------------------------------------   91 (420)
T ss_dssp             CBCCTTCEEEEEETTEEEEEETTEEEEEECCSEETT--------------------------------------------
T ss_pred             cccccceeeeecCCeEEEEEcCCcEEEEEeccccee--------------------------------------------
Confidence            345568899999999999999999999998765432                                            


Q ss_pred             eEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee
Q psy2671         190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK  269 (573)
Q Consensus       190 ~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~  269 (573)
                                 ..+.+| ..+....|+|++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++|+.
T Consensus        92 -----------~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~  159 (420)
T 3vl1_A           92 -----------KMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ  159 (420)
T ss_dssp             -----------TTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET
T ss_pred             -----------eEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC
Confidence                       223344 44556678999999999999999999999999888888899999999999999999999999


Q ss_pred             CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---CCccEEEEE
Q psy2671         270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS---HTRSVTCIR  346 (573)
Q Consensus       270 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~~~  346 (573)
                      |+.|++||+.+++.+ ..+.+|...|.+++|.|     +++.|++++.||+|++||+.+++.+..+..   |...+.+++
T Consensus       160 d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~  233 (420)
T 3vl1_A          160 DMQLKIWSVKDGSNP-RTLIGHRATVTDIAIID-----RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIA  233 (420)
T ss_dssp             TSEEEEEETTTCCCC-EEEECCSSCEEEEEEET-----TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEE
T ss_pred             CCeEEEEeCCCCcCc-eEEcCCCCcEEEEEEcC-----CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEE
Confidence            999999999988765 35678999999999987     567899999999999999999998888764   455666666


Q ss_pred             ECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671         347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC  426 (573)
Q Consensus       347 ~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (573)
                      +.+.+       +..             ....+...+..                                     ..++
T Consensus       234 ~~~~~-------~~~-------------~~~~~~~~v~~-------------------------------------~~~s  256 (420)
T 3vl1_A          234 LFVGT-------DRQ-------------LHEISTSKKNN-------------------------------------LEFG  256 (420)
T ss_dssp             EEECC-------CSS-------------CGGGCCCCCCT-------------------------------------TCSS
T ss_pred             EecCC-------cce-------------eeecccCcccc-------------------------------------eEEc
Confidence            54321       000             00111111111                                     1234


Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeE-EEeecC-Ccc
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRIGKF-ITTLRG-HVQ  503 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~-~~~~~~-h~~  503 (573)
                      |++.++++|+.||.|++||+++.........+|...|.+++|+|+++ +|++|+.||.|++||+++++. +..+.+ |..
T Consensus       257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~  336 (420)
T 3vl1_A          257 TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT  336 (420)
T ss_dssp             CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS
T ss_pred             CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC
Confidence            77899999999999999999887666566667889999999999999 999999999999999998754 666766 667


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCccc---------ccccccCcCCCEEEEEEccCCC---EEEEeeCCCcEEEc
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK---------IEQDLPGHGDEVYAVDWAPDGE---KVASGGKDKVLRLW  571 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~---------~~~~l~~h~~~v~~~~~s~d~~---~l~s~~~d~~i~iw  571 (573)
                      .+.++.+ +++++|++++.|+.|++|++....         ....+.+|.+.|.+++|+|+++   .|+++|.+|.+++|
T Consensus       337 ~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~  415 (420)
T 3vl1_A          337 PINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALY  415 (420)
T ss_dssp             CEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEE
T ss_pred             CceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEE
Confidence            7888855 578899999999999999987632         2234567888999999999999   78889999999999


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      +
T Consensus       416 ~  416 (420)
T 3vl1_A          416 N  416 (420)
T ss_dssp             E
T ss_pred             e
Confidence            6

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1e-42  Score=348.93  Aligned_cols=287  Identities=30%  Similarity=0.518  Sum_probs=242.3

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC------------------cEEEEEEcCCCCeEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH------------------WVLCIAWSPDSKQLVS  266 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~------------------~V~~v~~s~dg~~l~s  266 (573)
                      +|.+.|.+++|+|||++||+|+ |+++++|++.+++.+..+.+|..                  .|.+++|+|||++|++
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s  140 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  140 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence            5999999999999999999976 78999999999988777765532                  4999999999999999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      |+.|+.|++||+.+++.+ ..+.+|...|.+++|.|     ++++|++++.|++|++||+.++++...+. +...+.+++
T Consensus       141 ~~~d~~i~iwd~~~~~~~-~~~~~h~~~v~~~~~~p-----~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~  213 (393)
T 1erj_A          141 GAEDRLIRIWDIENRKIV-MILQGHEQDIYSLDYFP-----SGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA  213 (393)
T ss_dssp             EETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred             EcCCCeEEEEECCCCcEE-EEEccCCCCEEEEEEcC-----CCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence            999999999999988655 45789999999999977     56789999999999999999998877665 456788888


Q ss_pred             ECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         347 WGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       347 ~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      |++ ++ .+++|+.|++|++||++++.....+..                                              
T Consensus       214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~----------------------------------------------  247 (393)
T 1erj_A          214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS----------------------------------------------  247 (393)
T ss_dssp             ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-----------------------------------------------
T ss_pred             EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc----------------------------------------------
Confidence            876 44 688888888888888876644322210                                              


Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------------
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG------------  492 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~------------  492 (573)
                                                 ......+|...|.+++|+|+|++|++|+.||+|++||+++.            
T Consensus       248 ---------------------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~  300 (393)
T 1erj_A          248 ---------------------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG  300 (393)
T ss_dssp             --------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred             ---------------------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence                                       00112468888999999999999999999999999998753            


Q ss_pred             eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc------CCCEEEEeeCCC
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP------DGEKVASGGKDK  566 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~------d~~~l~s~~~d~  566 (573)
                      .+...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|++      ++++|+|||.|+
T Consensus       301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg  380 (393)
T 1erj_A          301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDC  380 (393)
T ss_dssp             CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTS
T ss_pred             cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCC
Confidence            34567789999999999999999999999999999999999999999999999999999986      678999999999


Q ss_pred             cEEEcc
Q psy2671         567 VLRLWQ  572 (573)
Q Consensus       567 ~i~iw~  572 (573)
                      +|++|+
T Consensus       381 ~i~iW~  386 (393)
T 1erj_A          381 KARIWK  386 (393)
T ss_dssp             EEEEEE
T ss_pred             cEEECc
Confidence            999997

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.1e-42  Score=337.99  Aligned_cols=320  Identities=17%  Similarity=0.275  Sum_probs=277.6

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      |.++|.+++|+|||++++++..++.+.+|+...........+|...|.+++|+|++++|++++ ||.|++||+.++....
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~   86 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS   86 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence            456789999999999999998888777777665555555568999999999999999999999 9999999998765432


Q ss_pred             cc----ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCCccEEEEEECCCc-EEEEEeC
Q psy2671         286 QP----MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWGGSG-LIYSASQ  358 (573)
Q Consensus       286 ~~----~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~-~l~s~s~  358 (573)
                      ..    ..+|...|.+++|.|     +++++++++.||.|++||+..++  ....+..|...|.+++|++++ .+++++.
T Consensus        87 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~  161 (337)
T 1gxr_A           87 PVSQLDCLNRDNYIRSCKLLP-----DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCS  161 (337)
T ss_dssp             CSEEEECSCTTSBEEEEEECT-----TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred             eeecccccCCCCcEEEEEEcC-----CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeC
Confidence            21    127889999999987     56789999999999999998876  566778899999999999876 7899999


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      |+.|++||++++.....+.+|...+..++++                                     |++..+++++.|
T Consensus       162 dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~-------------------------------------~~~~~l~~~~~d  204 (337)
T 1gxr_A          162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS-------------------------------------NDGTKLWTGGLD  204 (337)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEC-------------------------------------TTSSEEEEEETT
T ss_pred             CCcEEEEeCCCCceeeeeecccCceEEEEEC-------------------------------------CCCCEEEEEecC
Confidence            9999999999999999999998888888776                                     457899999999


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la  518 (573)
                      +.|++||+++.... .. ..+...+.+++|+|++++|++++.|+.|++||.++++. ..+..|...|.+++|+|++++|+
T Consensus       205 g~i~~~d~~~~~~~-~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~  281 (337)
T 1gxr_A          205 NTVRSWDLREGRQL-QQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFV  281 (337)
T ss_dssp             SEEEEEETTTTEEE-EE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEE
T ss_pred             CcEEEEECCCCceE-ee-ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEE
Confidence            99999999876432 22 34677899999999999999999999999999998775 46778999999999999999999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +++.|+.|++||+.+++.+.. ..|...|.++.|+|++++|++++.||.|++|+
T Consensus       282 ~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~  334 (337)
T 1gxr_A          282 STGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYE  334 (337)
T ss_dssp             EEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             EecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence            999999999999999887644 45788999999999999999999999999997

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.8e-41  Score=346.23  Aligned_cols=320  Identities=29%  Similarity=0.538  Sum_probs=278.5

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+.||.+.|.. +++++|++|+||+.||+|+|||+.+++++                                     
T Consensus       111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~-------------------------------------  152 (445)
T 2ovr_B          111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL-------------------------------------  152 (445)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE-------------------------------------
T ss_pred             eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEE-------------------------------------
Confidence            3467899997643 24557899999999999999999877543                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                        ..+.+|.+.|.+++|+  +..+++|+.|++|++||+.+++.+..+.+|...|.+++|+  ++
T Consensus       153 ------------------~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~  210 (445)
T 2ovr_B          153 ------------------RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EK  210 (445)
T ss_dssp             ------------------EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred             ------------------EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CC
Confidence                              2356899999999998  5699999999999999999999999999999999999995  56


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      .|++|+.||.|++||+.+++.+ ..+.+|...|.++.|       +++.+++++.||.|++||+.+++++..+.+|...|
T Consensus       211 ~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~v~~~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v  282 (445)
T 2ovr_B          211 RVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQY-------DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV  282 (445)
T ss_dssp             EEEEEETTSEEEEEESSSCCEE-EEEECCSSCEEEEEE-------CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCE
T ss_pred             EEEEEeCCCEEEEEECCCCcEE-EEEcCCcccEEEEEE-------CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCce
Confidence            8999999999999999988765 356789999999987       34679999999999999999999999999999999


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      .++.| ....+++++.|+.|++||++++.....+.+|...+..+.++                                 
T Consensus       283 ~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~---------------------------------  328 (445)
T 2ovr_B          283 YSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK---------------------------------  328 (445)
T ss_dssp             EEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE---------------------------------
T ss_pred             EEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe---------------------------------
Confidence            99999 45589999999999999999999998898888776655432                                 


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc---ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee-
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL-  498 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~-  498 (573)
                            +.++++|+.||.|++||+++.. .+..+.+   |...|.+++|+  +++|++|+.||.|++||..+++.+..+ 
T Consensus       329 ------~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~  399 (445)
T 2ovr_B          329 ------DNILVSGNADSTVKIWDIKTGQ-CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV  399 (445)
T ss_dssp             ------TTEEEEEETTSCEEEEETTTCC-EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             ------CCEEEEEeCCCeEEEEECCCCc-EEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence                  5689999999999999997754 3445544   88899999996  579999999999999999999988887 


Q ss_pred             ----cCCcceEEEEEECCCCCEEEEEeCCCc----EEEEeCCc
Q psy2671         499 ----RGHVQAVYMVAWSSDSRLLVSGSADST----LKVWNMKT  533 (573)
Q Consensus       499 ----~~h~~~v~~v~~s~dg~~las~s~D~~----v~vwd~~~  533 (573)
                          .+|...|++++|+|++.++|+|+.||+    |.+||+..
T Consensus       400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~  442 (445)
T 2ovr_B          400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  442 (445)
T ss_dssp             ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence                478889999999999999999999998    99999864

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.4e-41  Score=333.21  Aligned_cols=321  Identities=19%  Similarity=0.328  Sum_probs=271.1

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      |.++|.+++|+|||++++++..++.+.+|+.......                                           
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------   44 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ-------------------------------------------   44 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEE-------------------------------------------
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCcccc-------------------------------------------
Confidence            6778999999999999999988777766654321110                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEe--cCCCCcEEEEEEcCCCCe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKC--EGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~--~~h~~~V~~v~~s~dg~~  263 (573)
                                  ....+|.+.|.+++|+|++++|++++ |+.|++||+.++..   +..+  .+|...|.+++|+|++++
T Consensus        45 ------------~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  111 (337)
T 1gxr_A           45 ------------INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT  111 (337)
T ss_dssp             ------------EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE
T ss_pred             ------------ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCE
Confidence                        01226999999999999999999998 99999999987542   2333  379999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      |++++.||.|++||+.+++. ....+.+|...|.+++|.|     +++++++++.||.|++||+.+++....+..|...+
T Consensus       112 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i  186 (337)
T 1gxr_A          112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA  186 (337)
T ss_dssp             EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred             EEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECC-----CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce
Confidence            99999999999999988763 2234667889999999876     56789999999999999999999999999999999


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .+++|++++ .+++++.|+.|++||++++.....+. +...+..++++                                
T Consensus       187 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s--------------------------------  233 (337)
T 1gxr_A          187 SCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC--------------------------------  233 (337)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC--------------------------------
T ss_pred             EEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC--------------------------------
Confidence            999999877 79999999999999999887766553 34445555544                                


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                           |++.++++++.++.+++||+.+..  ...+..|...|.+++|+|++++|++++.||.|++||..+++.+... .|
T Consensus       234 -----~~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~  305 (337)
T 1gxr_A          234 -----PTGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KE  305 (337)
T ss_dssp             -----TTSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-EC
T ss_pred             -----CCCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cC
Confidence                 668899999999999999998754  3466789999999999999999999999999999999998877544 47


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      ...+.+++|+|++++|++++.|+.|++|++
T Consensus       306 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~  335 (337)
T 1gxr_A          306 SSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             SSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence            789999999999999999999999999996

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=6.7e-41  Score=342.01  Aligned_cols=315  Identities=28%  Similarity=0.556  Sum_probs=280.0

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      .+.||.+.|.. +++++|++|++|+.|++|++||+.+++.+..+.+|...|.+++|+  ++.|++|+.||.|++||+.++
T Consensus       113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~  189 (445)
T 2ovr_B          113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG  189 (445)
T ss_dssp             EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT
T ss_pred             EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC
Confidence            45689887543 355678999999999999999999999999999999999999997  569999999999999999998


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCe
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRT  361 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~  361 (573)
                      +.+ ..+.+|...|.++.|.       ++.+++++.||+|++||+.+++.+..+.+|...|.++.+ ....+++++.|+.
T Consensus       190 ~~~-~~~~~h~~~v~~~~~~-------~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~  260 (445)
T 2ovr_B          190 ECI-HTLYGHTSTVRCMHLH-------EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYDFM  260 (445)
T ss_dssp             EEE-EEECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETTSC
T ss_pred             cEE-EEECCCCCcEEEEEec-------CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCCCE
Confidence            765 4567899999999884       357999999999999999999999999999999999999 4457999999999


Q ss_pred             EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671         362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL  441 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  441 (573)
                      |++||++++.....+.+|...+.++++                                       ++..+++|+.|+.|
T Consensus       261 i~iwd~~~~~~~~~~~~~~~~v~~~~~---------------------------------------~~~~l~~~~~d~~i  301 (445)
T 2ovr_B          261 VKVWDPETETCLHTLQGHTNRVYSLQF---------------------------------------DGIHVVSGSLDTSI  301 (445)
T ss_dssp             EEEEEGGGTEEEEEECCCSSCEEEEEE---------------------------------------CSSEEEEEETTSCE
T ss_pred             EEEEECCCCcEeEEecCCCCceEEEEE---------------------------------------CCCEEEEEeCCCeE
Confidence            999999999999999999888877765                                       25689999999999


Q ss_pred             EEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEEEEEECCCCCEEE
Q psy2671         442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~~v~~s~dg~~la  518 (573)
                      ++||+++.. ....+.+|...+.++.++  ++++++|+.||.|++||.++++.+..+.+   |...|++++|+  +++|+
T Consensus       302 ~i~d~~~~~-~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  376 (445)
T 2ovr_B          302 RVWDVETGN-CIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVI  376 (445)
T ss_dssp             EEEETTTCC-EEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred             EEEECCCCC-EEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEE
Confidence            999998754 456778899889888774  67999999999999999999999998886   88899999996  57999


Q ss_pred             EEeCCCcEEEEeCCcccccccc-----cCcCCCEEEEEEccCCCEEEEeeCCCc----EEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDL-----PGHGDEVYAVDWAPDGEKVASGGKDKV----LRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l-----~~h~~~v~~~~~s~d~~~l~s~~~d~~----i~iw~  572 (573)
                      +|+.||.|++||+.+++.+..+     .+|.+.|++++|+|++.+|++|+.||+    |.+|+
T Consensus       377 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d  439 (445)
T 2ovr_B          377 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD  439 (445)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred             EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence            9999999999999999887776     578899999999999999999999998    99987

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1e-40  Score=342.61  Aligned_cols=318  Identities=25%  Similarity=0.458  Sum_probs=270.7

Q ss_pred             ccCCCccccE-EEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V-~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..+.+|.+.| .+++|  ++++|+||+.||+|++||+.+++++                                     
T Consensus       115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~-------------------------------------  155 (464)
T 3v7d_B          115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL-------------------------------------  155 (464)
T ss_dssp             EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE-------------------------------------
T ss_pred             EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE-------------------------------------
Confidence            4677999885 66666  5789999999999999999877543                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEc--CC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS--PD  260 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s--~d  260 (573)
                                        ..+.+|.+.|.+++|+|++ .|++|+.|++|++||+.+++.+..+.+|...|.+++|+  ++
T Consensus       156 ------------------~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~  216 (464)
T 3v7d_B          156 ------------------LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN  216 (464)
T ss_dssp             ------------------EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSS
T ss_pred             ------------------EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCC
Confidence                              2245899999999999998 89999999999999999999999999999999999998  57


Q ss_pred             CCeEEEEeeCCeEEEEECCCCcee----------------------cccccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQI----------------------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~----------------------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      +.+|++|+.||.|++||+.++...                      ...+.+|...+.++..       +++++++++.|
T Consensus       217 ~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~~~~~d  289 (464)
T 3v7d_B          217 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG-------HGNIVVSGSYD  289 (464)
T ss_dssp             CEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE-------ETTEEEEEETT
T ss_pred             CCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC-------CCCEEEEEeCC
Confidence            889999999999999999876532                      1235577777777643       45789999999


Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEE
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~  397 (573)
                      |.|++||+.+++++..+.+|...|.+++|++++ .+++|+.|++|++||++++.....+.+|...|..++++        
T Consensus       290 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--------  361 (464)
T 3v7d_B          290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--------  361 (464)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--------
T ss_pred             CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--------
Confidence            999999999999999999999999999999876 79999999999999999999999999999988877764        


Q ss_pred             EcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE
Q psy2671         398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS  477 (573)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las  477 (573)
                                                     +.++++++.||+|++||+.+.......  .|...+..++|+|+++++++
T Consensus       362 -------------------------------~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~  408 (464)
T 3v7d_B          362 -------------------------------DKFLVSAAADGSIRGWDANDYSRKFSY--HHTNLSAITTFYVSDNILVS  408 (464)
T ss_dssp             -------------------------------SSEEEEEETTSEEEEEETTTCCEEEEE--ECTTCCCEEEEEECSSEEEE
T ss_pred             -------------------------------CCEEEEEeCCCcEEEEECCCCceeeee--cCCCCccEEEEEeCCCEEEE
Confidence                                           458999999999999999876543322  35566788999999999999


Q ss_pred             eeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         478 ASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       478 ~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                      |+ ||.|++||.++++.+.. +..|...|++++|+ +..++++++.|+.+.+|
T Consensus       409 ~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          409 GS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             EE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred             ec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence            98 99999999999999886 67889999999997 34455566667765554

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-41  Score=332.65  Aligned_cols=296  Identities=19%  Similarity=0.313  Sum_probs=243.2

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .|.+|.+.|++++|+|++++||+|+.|+.|+|||+.+++++.                                      
T Consensus        27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~--------------------------------------   68 (369)
T 3zwl_B           27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG--------------------------------------   68 (369)
T ss_dssp             EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE--------------------------------------
T ss_pred             EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh--------------------------------------
Confidence            467899999999999999999999999999999998775432                                      


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                       .+.+|...|.+++|+|++++|++++.|++|++||+.+++.+..+. |...|.+++|+|++++|
T Consensus        69 -----------------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l  130 (369)
T 3zwl_B           69 -----------------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYF  130 (369)
T ss_dssp             -----------------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEE
T ss_pred             -----------------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEE
Confidence                             245799999999999999999999999999999999998888777 88899999999999999


Q ss_pred             EEEeeC-----CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC
Q psy2671         265 VSGCKN-----GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT  339 (573)
Q Consensus       265 ~sgs~d-----g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~  339 (573)
                      ++++.+     +.|++||+..+.....                         +....            ......+..|.
T Consensus       131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~-------------------------~~~~~------------~~~~~~~~~~~  173 (369)
T 3zwl_B          131 LAILDNVMKNPGSINIYEIERDSATHE-------------------------LTKVS------------EEPIHKIITHE  173 (369)
T ss_dssp             EEEECCBTTBCCEEEEEEEEECTTTCC-------------------------EEEEC------------SSCSEEEECCT
T ss_pred             EEecCCccCCCCEEEEEEecCCcccee-------------------------ecccc------------cceeeeccCCc
Confidence            999999     9999999865432110                         00000            01112222333


Q ss_pred             c--cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         340 R--SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       340 ~--~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      .  .+.+++|+++                                                                   
T Consensus       174 ~~~~~~~~~~~~~-------------------------------------------------------------------  186 (369)
T 3zwl_B          174 GLDAATVAGWSTK-------------------------------------------------------------------  186 (369)
T ss_dssp             TCCCEEEEEECGG-------------------------------------------------------------------
T ss_pred             CccceeEEEEcCC-------------------------------------------------------------------
Confidence            3  5566655544                                                                   


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                 +..+++++.||.|++||+.+.......+..|...|.+++|+|++++|++++.||.|++||.++++.+..
T Consensus       187 -----------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~  255 (369)
T 3zwl_B          187 -----------GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK  255 (369)
T ss_dssp             -----------GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             -----------CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence                       344555555555555555543344555667888899999999999999999999999999999998888


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCC--------------cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADS--------------TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~--------------~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      +. +...+.+++|+|+++++++++.++              .+++||+.+++.+..+.+|.+.|.+++|+|++++|++++
T Consensus       256 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  334 (369)
T 3zwl_B          256 YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG  334 (369)
T ss_dssp             EE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence            87 667899999999999999999988              899999999999999999999999999999999999999


Q ss_pred             CCCcEEEcc
Q psy2671         564 KDKVLRLWQ  572 (573)
Q Consensus       564 ~d~~i~iw~  572 (573)
                      .||.|++|+
T Consensus       335 ~dg~v~iw~  343 (369)
T 3zwl_B          335 EDGFIRLHH  343 (369)
T ss_dssp             TTSEEEEEE
T ss_pred             CCCeEEEEE
Confidence            999999996

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=2.1e-40  Score=325.55  Aligned_cols=287  Identities=26%  Similarity=0.488  Sum_probs=228.3

Q ss_pred             cCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCC-----eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         201 SSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQ-----TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~-----~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      .++.||.+.|++++|+|+ +++|||||.|++|+|||+.+.     .+...+.+|...|.+++|+|+|++|++|+.|+.|+
T Consensus        32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~  111 (340)
T 4aow_A           32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLR  111 (340)
T ss_dssp             EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccce
Confidence            467899999999999998 689999999999999998764     34567899999999999999999999999999999


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE-EEecCCCccEEEEEECCCcEE
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV-RVLTSHTRSVTCIRWGGSGLI  353 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~l  353 (573)
                      +|+...+.... ....+...+....+.+     .++.+++++.|+.+++||....... ....+|...+.+++|.+++  
T Consensus       112 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--  183 (340)
T 4aow_A          112 LWDLTTGTTTR-RFVGHTKDVLSVAFSS-----DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS--  183 (340)
T ss_dssp             EEETTTTEEEE-EEECCSSCEEEEEECT-----TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS--
T ss_pred             EEeecccceee-eecCCCCceeEEEEee-----cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC--
Confidence            99998776543 3344555666666554     4578999999999999998765433 3345677777776665332  


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                                                                                                ...+++
T Consensus       184 --------------------------------------------------------------------------~~~~~~  189 (340)
T 4aow_A          184 --------------------------------------------------------------------------SNPIIV  189 (340)
T ss_dssp             --------------------------------------------------------------------------SSCEEE
T ss_pred             --------------------------------------------------------------------------CCcEEE
Confidence                                                                                      123344


Q ss_pred             EEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671         434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                      +++.|++|++||+++.. ....+.+|...|++++|+|++++|++|+.||.|++||.++++.+..+..+ ..+.+++|+|+
T Consensus       190 s~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~  267 (340)
T 4aow_A          190 SCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPN  267 (340)
T ss_dssp             EEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSS
T ss_pred             EEcCCCEEEEEECCCCc-eeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCC
Confidence            55555555555554432 24455678889999999999999999999999999999999998888765 57999999998


Q ss_pred             CCEEEEEeCCCcEEEEeCCccccccc---------ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQD---------LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~---------l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.++ +++.|+.|++||++++..+..         ..+|...|++++|+||+++|++|+.||.|++|+
T Consensus       268 ~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~  334 (340)
T 4aow_A          268 RYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ  334 (340)
T ss_dssp             SSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             Ccee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence            8665 566799999999988765433         347889999999999999999999999999997

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=6.4e-41  Score=361.33  Aligned_cols=294  Identities=24%  Similarity=0.475  Sum_probs=242.3

Q ss_pred             ccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..+.+|.+.|++|+|+|++ ++|+|||.|++|||||+.+.....                                    
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~------------------------------------  419 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY------------------------------------  419 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS------------------------------------
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc------------------------------------
Confidence            4578999999999999875 799999999999999987643210                                    


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                    ..+...+.||...|.+++|+|++++|++|+.|++|+|||+.++..+..+.+|...|.+++|+|+++
T Consensus       420 --------------~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~  485 (694)
T 3dm0_A          420 --------------GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR  485 (694)
T ss_dssp             --------------CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred             --------------ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC
Confidence                          001123568999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCcee--cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQI--GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      +|++|+.|++|++||.......  .....+|...|.+++|.|..   ....+++++.|++|++||+...++...+.+|..
T Consensus       486 ~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~  562 (694)
T 3dm0_A          486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT---LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG  562 (694)
T ss_dssp             CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS---SSCEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred             EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC---CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence            9999999999999998654332  22345799999999998742   235799999999999999999999999999999


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|.+++|++++ .+++|+.|++|++||+.++..+..+                                           
T Consensus       563 ~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~-------------------------------------------  599 (694)
T 3dm0_A          563 YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL-------------------------------------------  599 (694)
T ss_dssp             CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC-------------------------------------------
T ss_pred             CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-------------------------------------------
Confidence            99999998876 6778888888888887665432211                                           


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                            .+...|.+++|+|++.++++++ |+.|++||+++++.+..+.
T Consensus       600 --------------------------------------~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~  640 (694)
T 3dm0_A          600 --------------------------------------EANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLK  640 (694)
T ss_dssp             --------------------------------------BCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEC
T ss_pred             --------------------------------------cCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhc
Confidence                                                  1224588899999988887765 5669999999988877665


Q ss_pred             CCc-------------------ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         500 GHV-------------------QAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       500 ~h~-------------------~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .+.                   ..+++++|||||++|++|+.||+|++|++.
T Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          641 VDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             CCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence            331                   137889999999999999999999999985

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-43  Score=361.18  Aligned_cols=282  Identities=12%  Similarity=0.134  Sum_probs=219.8

Q ss_pred             CCCCCcEEEEEEcCC------CCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671         204 PGHAEAVISVKFSPN------GRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~------g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~~~V~~v~~s~dg~~l~s  266 (573)
                      .+|.+.|.+++|+|+      +.+||+|+.|++|+|||+.++.           +...+.+|...|.+++|++++ .|++
T Consensus       204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~las  282 (524)
T 2j04_B          204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVC  282 (524)
T ss_dssp             EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEE
T ss_pred             EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEE
Confidence            357889999999997      5799999999999999997653           234678999999999999865 8999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEE--ecccccCCCC-CEEEEEeCCCcEEEEECCCCeEEEEecCCCc--c
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS--WEPFHLNHQC-RRFASSGKDGAIRIWDVILSQCVRVLTSHTR--S  341 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~--~  341 (573)
                      |+.||+|++||++++......+.+|...|.+++  |.|     ++ .+|+|++.|++|++||+..+++...+.+|..  .
T Consensus       283 gs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~-----~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~  357 (524)
T 2j04_B          283 GFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD-----FEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN  357 (524)
T ss_dssp             EETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT-----TSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred             EeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC-----CCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence            999999999999877544345678999999994  443     44 6899999999999999988877666766654  4


Q ss_pred             EEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      |.+++|++++ .+++++.|++|++||++++....++.+|...|++++++                               
T Consensus       358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S-------------------------------  406 (524)
T 2j04_B          358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS-------------------------------  406 (524)
T ss_dssp             CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC-------------------------------
T ss_pred             ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC-------------------------------
Confidence            7899999976 78899999999999999998888888999999999887                               


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-----ccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeE
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-----HQQLINCVEFSPDGRIIASASFDKSIKLWDGR-IGKF  494 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-----h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~  494 (573)
                            |++..|++|+.||+|++||+...  .+.....     +...|.+++|+|+|+.+.. .  ..+++|+.. ++..
T Consensus       407 ------p~g~~l~Sgs~Dgtv~lwd~~~~--~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~--~~~~~~~~~~~g~~  475 (524)
T 2j04_B          407 ------RLHPMVLAGSADGSLIITNAARR--LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-D--SSYEVYPLTVNDVS  475 (524)
T ss_dssp             ------SSCCBCEEEETTTEEECCBSCSS--TTTCC------CCCCEEEECBCCSSSCEEEE-C--CCCCCCC-------
T ss_pred             ------CCCCeEEEEECCCEEEEEechHh--hccccccCccceeeeEEEEeccCCCCCeEEc-c--CCceecccccCCcc
Confidence                  45788999999999999998643  2211111     1124779999999986532 2  234444433 4677


Q ss_pred             EEeecCCcceEEEEEECCCCC---EEEEEeCCCcEEEEeCCc
Q psy2671         495 ITTLRGHVQAVYMVAWSSDSR---LLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       495 ~~~~~~h~~~v~~v~~s~dg~---~las~s~D~~v~vwd~~~  533 (573)
                      +.++.+|...|++|+|+|+++   ++|+|+.||+||||++..
T Consensus       476 ~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~  517 (524)
T 2j04_B          476 KAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL  517 (524)
T ss_dssp             ------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred             eeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence            888999999999999999964   999999999999999864

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.4e-41  Score=342.62  Aligned_cols=348  Identities=11%  Similarity=0.185  Sum_probs=265.4

Q ss_pred             cccccC-CCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccC---CcceeeecCCCeeeeecccccccccccccCCCCC
Q psy2671         101 RCTSSM-PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT---QTPLFKCEGTPYLFYVNETEITKTLADVLPLDTL  175 (573)
Q Consensus       101 ~~~~~~-~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (573)
                      ++...+ .+|.++|++++|+| ++++||||+.|++|+|||+.+   +.+..                             
T Consensus        53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----------------------------  103 (437)
T 3gre_A           53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-----------------------------  103 (437)
T ss_dssp             CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-----------------------------
T ss_pred             eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-----------------------------
Confidence            344456 78999999999999 999999999999999999875   22100                             


Q ss_pred             CccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC---CCeeeEEec------
Q psy2671         176 NTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT---TQTPLFKCE------  246 (573)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~---~~~~~~~~~------  246 (573)
                                             +.. ..+|...|.+++|+|++++|++|+.|++|++||+.   +++.+....      
T Consensus       104 -----------------------~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~  159 (437)
T 3gre_A          104 -----------------------SSL-TYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK  159 (437)
T ss_dssp             -----------------------CSE-EEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred             -----------------------eee-eccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence                                   000 11489999999999999999999999999999984   443332222      


Q ss_pred             ----C--CCCcEEEEE--EcCCCCeEEEEeeCCeEEEEECCCCceecccccC--CcccEEEEEecccccCCCCCEEEEEe
Q psy2671         247 ----G--HKHWVLCIA--WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRG--HKQWITALSWEPFHLNHQCRRFASSG  316 (573)
Q Consensus       247 ----~--h~~~V~~v~--~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~l~s~~  316 (573)
                          .  +...+.++.  +++++.+|++|+.||.|++||+++++.+. .+.+  |...|.+++|.|     +++++++++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~s~-----~~~~l~s~~  233 (437)
T 3gre_A          160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ-IIENSPRHGAVSSICIDE-----ECCVLILGT  233 (437)
T ss_dssp             EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE-EEECCGGGCCEEEEEECT-----TSCEEEEEE
T ss_pred             EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE-EEccCCCCCceEEEEECC-----CCCEEEEEc
Confidence                1  556677777  66899999999999999999999987754 3445  889999999976     568999999


Q ss_pred             CCCcEEEEECCCCeEEEEec-CCCccEEEEEECC----Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEecc
Q psy2671         317 KDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGG----SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST  390 (573)
Q Consensus       317 ~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~----~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~  390 (573)
                      .||.|++||+..++++..+. .|...|.+++|.+    ++ .+++++.|++|++||++++.....+.+|...+..+.+++
T Consensus       234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  313 (437)
T 3gre_A          234 TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLP  313 (437)
T ss_dssp             TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred             CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecc
Confidence            99999999999999988876 7888999997753    45 789999999999999999998888888765544333322


Q ss_pred             CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc--ccccEEEEEE
Q psy2671         391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG--HQQLINCVEF  468 (573)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~  468 (573)
                      +                                     +..+                   .-..+.+  |...|.+++|
T Consensus       314 ~-------------------------------------~~~l-------------------~~~~~~~~~~~~~v~~l~~  337 (437)
T 3gre_A          314 I-------------------------------------EKGL-------------------EELNFCGIRSLNALSTISV  337 (437)
T ss_dssp             B-------------------------------------CSSG-------------------GGCCCCCCCSGGGGCCEEE
T ss_pred             c-------------------------------------cccc-------------------ccceecccccCCceEEEEE
Confidence            1                                     1111                   0011233  7888999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD  545 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~  545 (573)
                      + ++++|++|+.||.|++||+.+++.+..+.+|.   ..+....++++..+++..        |+............|.+
T Consensus       338 ~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~  408 (437)
T 3gre_A          338 S-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHD  408 (437)
T ss_dssp             E-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC-------------CC
T ss_pred             C-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCccccccc
Confidence            9 78999999999999999999999888888763   345666777776665544        33333444455677999


Q ss_pred             CEEEEEEccC--CCEEEEeeCCCcEEEcc
Q psy2671         546 EVYAVDWAPD--GEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       546 ~v~~~~~s~d--~~~l~s~~~d~~i~iw~  572 (573)
                      .|++++|+++  +.+|++|+.||.|++|+
T Consensus       409 ~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          409 IINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             CEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             ceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence            9999999998  77999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.3e-40  Score=321.56  Aligned_cols=245  Identities=22%  Similarity=0.401  Sum_probs=203.3

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.+|.+.|.+++|+|++++|++|+.|++|++||+.++..+..+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus         7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~   86 (304)
T 2ynn_A            7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT   86 (304)
T ss_dssp             EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT
T ss_pred             EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC
Confidence            34668999999999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD  359 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d  359 (573)
                      ++.+                                                ..+.+|...|.+++|++++ .+++|+.|
T Consensus        87 ~~~~------------------------------------------------~~~~~h~~~v~~~~~~~~~~~l~sgs~D  118 (304)
T 2ynn_A           87 GEKV------------------------------------------------VDFEAHPDYIRSIAVHPTKPYVLSGSDD  118 (304)
T ss_dssp             CCEE------------------------------------------------EEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred             CcEE------------------------------------------------EEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence            6432                                                2233455556666655443 34455555


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      ++|++||+++                                                                      
T Consensus       119 ~~v~lWd~~~----------------------------------------------------------------------  128 (304)
T 2ynn_A          119 LTVKLWNWEN----------------------------------------------------------------------  128 (304)
T ss_dssp             SCEEEEEGGG----------------------------------------------------------------------
T ss_pred             CeEEEEECCC----------------------------------------------------------------------
Confidence            5555554432                                                                      


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEee-cCCcceEEEEEECC--CCC
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTL-RGHVQAVYMVAWSS--DSR  515 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~--dg~  515 (573)
                               .......+.+|...|.+++|+| ++.+|++|+.|++|++||++.+.....+ .+|...+..++|+|  +++
T Consensus       129 ---------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  199 (304)
T 2ynn_A          129 ---------NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP  199 (304)
T ss_dssp             ---------TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred             ---------CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence                     2222334567888899999999 6899999999999999999887655554 35667899999987  788


Q ss_pred             EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         516 LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|++|+.|++|++||+++++++..+.+|...|.+++|+|++++|++|+.|++|++|+
T Consensus       200 ~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd  256 (304)
T 2ynn_A          200 YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWN  256 (304)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred             EEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence            999999999999999999999999999999999999999999999999999999997

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-42  Score=354.67  Aligned_cols=309  Identities=10%  Similarity=0.096  Sum_probs=226.4

Q ss_pred             cCCCCeEEEEeCCCeEEEEECCCCeee----EEecCCCCcEEEEEEcCC------CCeEEEEeeCCeEEEEECCCCcee-
Q psy2671         216 SPNGRSLASGSGDTTVRFWDVTTQTPL----FKCEGHKHWVLCIAWSPD------SKQLVSGCKNGVIHAWDSSTGKQI-  284 (573)
Q Consensus       216 sp~g~~las~s~d~~i~iwd~~~~~~~----~~~~~h~~~V~~v~~s~d------g~~l~sgs~dg~i~vwd~~~~~~~-  284 (573)
                      +|+++.+++++.|++|+|||+.+++..    ..+.+|.+.|.+++|+|+      +.+||+|+.||+|++||+..+... 
T Consensus       170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~  249 (524)
T 2j04_B          170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV  249 (524)
T ss_dssp             ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred             chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence            444555666778999999999876532    345678889999999997      579999999999999999876421 


Q ss_pred             ---------cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEE--EECCCc-
Q psy2671         285 ---------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCI--RWGGSG-  351 (573)
Q Consensus       285 ---------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~--~~~~~~-  351 (573)
                               ...+.+|...|.+++|.+.      ..|++|+.||+|++||+.++ .+...+.+|...|.++  .|++++ 
T Consensus       250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~------~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~  323 (524)
T 2j04_B          250 HVFKMCEKPSLTLSLADSLITTFDFLSP------TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFED  323 (524)
T ss_dssp             SEEECCCSCSEEECCTTTCEEEEEESSS------SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSC
T ss_pred             ccceeecCceEEEEcCCCCEEEEEecCC------CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCC
Confidence                     1135689999999999751      47999999999999999876 3455688999999999  567764 


Q ss_pred             -EEEEEeCCCeEEEEeCCCCeeeEeccCCcc--eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         352 -LIYSASQDRTIKVWRASDGVMCRTLEGHAH--WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       352 -~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                       .+++++.|++|++||++++.....+.+|..  .|.+++++                                     |+
T Consensus       324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fs-------------------------------------p~  366 (524)
T 2j04_B          324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYC-------------------------------------PQ  366 (524)
T ss_dssp             CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEE-------------------------------------TT
T ss_pred             eEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeC-------------------------------------CC
Confidence             789999999999999988776655555542  24445544                                     56


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-----Ccc
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-----HVQ  503 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-----h~~  503 (573)
                      +..+++++.|++|++||+++.. .+..+.+|...|++|+|+|+|++|++|+.||+|++||...+ .+..++.     +..
T Consensus       367 ~~~l~s~~~d~tv~lwd~~~~~-~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~  444 (524)
T 2j04_B          367 IYSYIYSDGASSLRAVPSRAAF-AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSL  444 (524)
T ss_dssp             TTEEEEECSSSEEEEEETTCTT-CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCC
T ss_pred             cCeEEEeCCCCcEEEEECcccc-cceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeee
Confidence            7889999999999999998754 34567789999999999999999999999999999998653 2222111     112


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCC-cccccccccCcCCCEEEEEEccCCC---EEEEeeCCCcEEEcc
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMK-TKKIEQDLPGHGDEVYAVDWAPDGE---KVASGGKDKVLRLWQ  572 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~-~~~~~~~l~~h~~~v~~~~~s~d~~---~l~s~~~d~~i~iw~  572 (573)
                      .+++++|+|+|+.+. ...  .+++|+.. ++.++..+.+|...|++|+|+|+++   +||+|+.||+||||+
T Consensus       445 ~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~  514 (524)
T 2j04_B          445 RLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY  514 (524)
T ss_dssp             EEEECBCCSSSCEEE-ECC--CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred             EEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence            578999999998653 222  34455443 4667788999999999999999954   999999999999996

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-42  Score=344.58  Aligned_cols=315  Identities=12%  Similarity=0.134  Sum_probs=254.1

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      -.++|.+|+|||||+++||+|.|++||  |...++                                             
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~---------------------------------------------   46 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK---------------------------------------------   46 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS---------------------------------------------
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceee--cccccc---------------------------------------------
Confidence            457999999999999999999999999  643321                                             


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                   .+.||...|.+++|+|+|       .++++.+|+..... +..+ +|...|.+++|||||.+||+++
T Consensus        47 -------------~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~~~~-~~~~~V~~vawSPdG~~LAs~s  104 (588)
T 2j04_A           47 -------------DINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-LLNS-QPVCYPRVCKPSPIDDWMAVLS  104 (588)
T ss_dssp             -------------CCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-SSTT-SCSCCEEEEEECSSSSCEEEEE
T ss_pred             -------------eecCCCccEEEEEECCCC-------CcceEEEEeCCCce-Eeec-CCCCcEEEEEECCCCCEEEEEe
Confidence                         235899999999999999       46666666543222 2222 5588899999999999999999


Q ss_pred             eCCeEEEEECCCCceecccccCCcc-----cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-------EEEEe-
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQ-----WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-------CVRVL-  335 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~-  335 (573)
                      .||.|++||...  .+ ..+. |..     .+.+++|+|     ++++|++|+.||+|++||+..+.       .+..+ 
T Consensus       105 ~dg~V~iwd~~~--~l-~~l~-~~~~~~~~sv~svafSP-----DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~  175 (588)
T 2j04_A          105 NNGNVSVFKDNK--ML-TNLD-SKGNLSSRTYHCFEWNP-----IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIR  175 (588)
T ss_dssp             TTSCEEEEETTE--EE-EECC-CSSCSTTTCEEEEEECS-----SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEE
T ss_pred             CCCcEEEEeCCc--ee-eecc-CCCccccccEEEEEEcC-----CCCEEEEEcCCCEEEEEECCCCccccccceeeeeee
Confidence            999999999644  32 2334 544     599999977     78899999999999999998874       35665 


Q ss_pred             ---cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCee---eEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         336 ---TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM---CRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       336 ---~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                         .+|...|.+++|++++ +++++.|+++++|++.++..   .+++ .+|...|.+++++                   
T Consensus       176 ~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-------------------  235 (588)
T 2j04_A          176 LSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-------------------  235 (588)
T ss_dssp             CSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-------------------
T ss_pred             cccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-------------------
Confidence               6788899999999999 99999999999999987763   2455 4777778777765                   


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE--CCCCCEEEEeeCCCcEEE
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF--SPDGRIIASASFDKSIKL  486 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~--sp~g~~las~s~dg~i~l  486 (573)
                                          +..+|+++ +++|++||..+..... ...+|...|..++|  +|+++.|++++.||+ ++
T Consensus       236 --------------------g~~LASa~-~~tIkLWd~~~~~~~~-~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl  292 (588)
T 2j04_A          236 --------------------DYKVVLTC-PGYVHKIDLKNYSISS-LKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV  292 (588)
T ss_dssp             --------------------TTEEEEEC-SSEEEEEETTTTEEEE-EECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred             --------------------CCEEEEEe-CCeEEEEECCCCeEEE-EEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence                                35788887 6999999988755422 23389999999999  999999999999999 99


Q ss_pred             EeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         487 WDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       487 wd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      |...                .++++||+..+++.  |+++++|+...+. ...+.+ ...|++++|||||+.+|+++.
T Consensus       293 w~~d----------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~  350 (588)
T 2j04_A          293 LLED----------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD  350 (588)
T ss_dssp             EESS----------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred             Eeec----------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence            9866                25699999998775  9999999986555 445555 677999999999999998874

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.2e-39  Score=332.70  Aligned_cols=319  Identities=23%  Similarity=0.416  Sum_probs=272.6

Q ss_pred             CCCCCCCcE-EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         202 SMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       202 ~~~gh~~~V-~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .+.||.+.| .++.|  ++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++ +|++|+.||+|++||+++
T Consensus       116 ~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~  192 (464)
T 3v7d_B          116 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK  192 (464)
T ss_dssp             EEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT
T ss_pred             EEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC
Confidence            466898875 55555  56799999999999999999999999999999999999999988 899999999999999999


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe-----------------------EEEEecC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ-----------------------CVRVLTS  337 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-----------------------~~~~~~~  337 (573)
                      ++.+ ..+.+|...|.++.|.+.   +++..+++++.||+|++||+....                       ....+.+
T Consensus       193 ~~~~-~~~~~h~~~v~~l~~~~~---~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (464)
T 3v7d_B          193 GCCT-HVFEGHNSTVRCLDIVEY---KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG  268 (464)
T ss_dssp             TEEE-EEECCCSSCEEEEEEEES---SSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred             CcEE-EEECCCCCccEEEEEecC---CCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence            8765 456789999999998763   356789999999999999998754                       2456778


Q ss_pred             CCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       338 h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      |...+.++... ...+++++.|+.|++||++++.....+.+|...|.+++++                            
T Consensus       269 ~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~----------------------------  319 (464)
T 3v7d_B          269 HMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD----------------------------  319 (464)
T ss_dssp             CSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE----------------------------
T ss_pred             ccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEc----------------------------
Confidence            99999988644 3479999999999999999999999999999999888876                            


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                               |++.++++|+.||+|++||++++. .+..+.+|...|.+++|+  +++|++|+.||.|++||..+++....
T Consensus       320 ---------~~~~~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~  387 (464)
T 3v7d_B          320 ---------HERKRCISASMDTTIRIWDLENGE-LMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS  387 (464)
T ss_dssp             ---------TTTTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ---------CCCCEEEEEeCCCcEEEEECCCCc-EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeee
Confidence                     457899999999999999998754 567788999999999998  57999999999999999998876655


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .. |...+..++|++++++|++++ |+.|++||+++++.+.. +.+|.+.|++++|+ ++..+++++.|+.+.+|
T Consensus       388 ~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~  459 (464)
T 3v7d_B          388 YH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE  459 (464)
T ss_dssp             EE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred             ec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence            53 455677889999999999998 99999999999998875 77889999999998 33455566677766554

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.1e-39  Score=351.66  Aligned_cols=284  Identities=26%  Similarity=0.503  Sum_probs=236.3

Q ss_pred             cCCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCC-----eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         201 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQ-----TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~-----~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      ..+.+|.+.|++++|+|++ ++|+||+.|++|++||+.+.     .....+.+|...|.+++|+|++++|++|+.||+|+
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~  455 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR  455 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence            3467999999999999875 78999999999999998763     34567889999999999999999999999999999


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCccEEEEEECCCc
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL---TSHTRSVTCIRWGGSG  351 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~h~~~v~~~~~~~~~  351 (573)
                      +||+.++... ..+.+|...|.+++|.|     +++++++++.|++|++||..........   .+|...|.+++|++++
T Consensus       456 vwd~~~~~~~-~~~~~h~~~v~~~~~s~-----~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  529 (694)
T 3dm0_A          456 LWDLAAGVST-RRFVGHTKDVLSVAFSL-----DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT  529 (694)
T ss_dssp             EEETTTTEEE-EEEECCSSCEEEEEECT-----TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred             EEECCCCcce-eEEeCCCCCEEEEEEeC-----CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence            9999988765 45679999999999977     5678999999999999998655443332   4688889999998754


Q ss_pred             ---EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         352 ---LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       352 ---~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                         .+++++.|++|++||++++.                                                         
T Consensus       530 ~~~~l~s~s~d~~v~vwd~~~~~---------------------------------------------------------  552 (694)
T 3dm0_A          530 LQPTIVSASWDKTVKVWNLSNCK---------------------------------------------------------  552 (694)
T ss_dssp             SSCEEEEEETTSCEEEEETTTCC---------------------------------------------------------
T ss_pred             CcceEEEEeCCCeEEEEECCCCc---------------------------------------------------------
Confidence               46666666666666654332                                                         


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV  508 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v  508 (573)
                                             ....+.+|...|++++|+|+|++|++|+.||+|++||+++++.+..+..+ ..|.++
T Consensus       553 -----------------------~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~  608 (694)
T 3dm0_A          553 -----------------------LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHAL  608 (694)
T ss_dssp             -----------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEE
T ss_pred             -----------------------EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEE
Confidence                                   22345578888999999999999999999999999999999988888754 579999


Q ss_pred             EECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC-------------------CCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-------------------DEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       509 ~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~-------------------~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      +|+|++.+|++++ |+.|++||+++++.+..+..+.                   ..+++++|||||++|++|+.||+|+
T Consensus       609 ~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~  687 (694)
T 3dm0_A          609 CFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR  687 (694)
T ss_dssp             EECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence            9999998887765 5669999999887765543221                   2378999999999999999999999


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      +|+
T Consensus       688 iW~  690 (694)
T 3dm0_A          688 VWG  690 (694)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            997

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=9.7e-40  Score=326.61  Aligned_cols=302  Identities=19%  Similarity=0.323  Sum_probs=242.8

Q ss_pred             ccCCCccccEEEEEEcCCC-CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         104 SSMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~-~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ..+.+|.+.|.+++|+|++ ++||+|+.|++|+|||+.++.....                                   
T Consensus        67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-----------------------------------  111 (383)
T 3ei3_B           67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF-----------------------------------  111 (383)
T ss_dssp             EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-----------------------------------
T ss_pred             EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-----------------------------------
Confidence            3567899999999999999 9999999999999999987654311                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEec---CCCCcEEEEEEc
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCE---GHKHWVLCIAWS  258 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~---~h~~~V~~v~~s  258 (573)
                                        ....+|...|.+++|+| ++++|++++.|+.|++||+.+ ..+..+.   +|...|.+++|+
T Consensus       112 ------------------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~  172 (383)
T 3ei3_B          112 ------------------IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVS  172 (383)
T ss_dssp             ------------------ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEE
T ss_pred             ------------------eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEEC
Confidence                              12347999999999999 789999999999999999986 4444444   345889999999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCC----CeEEE
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVIL----SQCVR  333 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~----~~~~~  333 (573)
                      |++++|++|+.|+.|++||++ ++.+ ..+.+|...|.+++|.|     +++ .+++++.|+.|++||+..    +.++.
T Consensus       173 ~~~~~l~~~~~d~~i~i~d~~-~~~~-~~~~~h~~~v~~~~~~~-----~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~  245 (383)
T 3ei3_B          173 VSRQMLATGDSTGRLLLLGLD-GHEI-FKEKLHKAKVTHAEFNP-----RCDWLMATSSVDATVKLWDLRNIKDKNSYIA  245 (383)
T ss_dssp             TTTTEEEEEETTSEEEEEETT-SCEE-EEEECSSSCEEEEEECS-----SCTTEEEEEETTSEEEEEEGGGCCSTTCEEE
T ss_pred             CCCCEEEEECCCCCEEEEECC-CCEE-EEeccCCCcEEEEEECC-----CCCCEEEEEeCCCEEEEEeCCCCCcccceEE
Confidence            999999999999999999994 4443 45678999999999987     445 899999999999999987    55666


Q ss_pred             EecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         334 VLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       334 ~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      .+ +|...|.+++|++ ++ .+++++.|+.|++||++++.....+.+|......                          
T Consensus       246 ~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------------------------  298 (383)
T 3ei3_B          246 EM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ--------------------------  298 (383)
T ss_dssp             EE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT--------------------------
T ss_pred             Ee-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc--------------------------
Confidence            66 6999999999998 76 7999999999999999887665555444321000                          


Q ss_pred             hhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC
Q psy2671         412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI  491 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~  491 (573)
                                     .... +       . ..|.             ....+..++|+|+|++  +|+.||.|++||..+
T Consensus       299 ---------------~~~~-~-------~-~~~~-------------p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~  339 (383)
T 3ei3_B          299 ---------------HLTP-I-------K-ATWH-------------PMYDLIVAGRYPDDQL--LLNDKRTIDIYDANS  339 (383)
T ss_dssp             ---------------TSCC-C-------C-CEEC-------------SSSSEEEEECBCCTTT--CTTCCCCEEEEETTT
T ss_pred             ---------------cccc-e-------E-Eecc-------------CCCCceEEEecCCccc--ccCCCCeEEEEecCC
Confidence                           0000 0       0 0111             1234667899999988  899999999999999


Q ss_pred             CeEEEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         492 GKFITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       492 ~~~~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ++.+..+.+  |...+.+++|+|++++|++|+ |+.|++||+++
T Consensus       340 ~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          340 GGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             CCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             CceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence            999999987  456777889999999999997 99999999864

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=6.9e-40  Score=318.58  Aligned_cols=247  Identities=28%  Similarity=0.492  Sum_probs=209.3

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..+.||...|.+++|+|++++++||+.|++|+|||+.+++++..                                    
T Consensus        74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~------------------------------------  117 (321)
T 3ow8_A           74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKS------------------------------------  117 (321)
T ss_dssp             EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE------------------------------------
T ss_pred             eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEE------------------------------------
Confidence            45789999999999999999999999999999999988755421                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCe
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQ  263 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~  263 (573)
                                         +.+|...+.+++|+|++++|++|+.|+.|++||+.+++....+..|...|.+++|+|+|++
T Consensus       118 -------------------~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~  178 (321)
T 3ow8_A          118 -------------------IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY  178 (321)
T ss_dssp             -------------------EECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE
T ss_pred             -------------------EeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE
Confidence                               2356677889999999999999999999999999999999899999999999999999999


Q ss_pred             EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       264 l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      |++|+.||.|++||+++++.+ ..+.+|...|.+++|.|     ++++|++++.|++|++||+..+.             
T Consensus       179 lasg~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~sp-----d~~~l~s~s~dg~i~iwd~~~~~-------------  239 (321)
T 3ow8_A          179 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKIYDVQHAN-------------  239 (321)
T ss_dssp             EEEEETTSCEEEEETTTTEEE-EEECCCSSCCCEEEECT-----TSCEEEEECTTSCEEEEETTTCC-------------
T ss_pred             EEEEcCCCeEEEEECCCCcEE-EEEcccCCceeEEEEcC-----CCCEEEEEcCCCeEEEEECCCcc-------------
Confidence            999999999999999988765 34567777777766655     34455555555555555543221             


Q ss_pred             EEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         344 CIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       344 ~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                                                                                                      
T Consensus       240 --------------------------------------------------------------------------------  239 (321)
T 3ow8_A          240 --------------------------------------------------------------------------------  239 (321)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ  503 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~  503 (573)
                                                  ....+.+|...|.+++|+|++++|++|+.|++|++||+++++++.++.+|..
T Consensus       240 ----------------------------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~  291 (321)
T 3ow8_A          240 ----------------------------LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD  291 (321)
T ss_dssp             ----------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred             ----------------------------eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC
Confidence                                        1123445777899999999999999999999999999999999999999999


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .|++++|+|++++|++++.|++|++||..
T Consensus       292 ~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          292 QVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            99999999999999999999999999963

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=8.6e-40  Score=329.45  Aligned_cols=245  Identities=30%  Similarity=0.514  Sum_probs=215.0

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ..+.||.++|++++|+|++++|++|+.|++|+|||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~  181 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG  181 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence            45679999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      ++.+ ..+.+|...|.+++|.|     +++.+++++.|++|++||+.++.++                            
T Consensus       182 ~~~~-~~~~~h~~~V~~v~~~p-----~~~~l~s~s~D~~i~~wd~~~~~~~----------------------------  227 (410)
T 1vyh_C          182 FECI-RTMHGHDHNVSSVSIMP-----NGDHIVSASRDKTIKMWEVQTGYCV----------------------------  227 (410)
T ss_dssp             SCEE-ECCCCCSSCEEEEEECS-----SSSEEEEEETTSEEEEEETTTCCEE----------------------------
T ss_pred             Ccee-EEEcCCCCCEEEEEEeC-----CCCEEEEEeCCCeEEEEECCCCcEE----------------------------
Confidence            7765 45678888888887765     3455666666666666655433221                            


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                                                                                                      
T Consensus       228 --------------------------------------------------------------------------------  227 (410)
T 1vyh_C          228 --------------------------------------------------------------------------------  227 (410)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC-------
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-------  513 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d-------  513 (573)
                                   ..+.+|...|.+++|+|+|++|++|+.|++|++||.++++....+.+|...|.+++|+|+       
T Consensus       228 -------------~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  294 (410)
T 1vyh_C          228 -------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS  294 (410)
T ss_dssp             -------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGG
T ss_pred             -------------EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchh
Confidence                         123345667888999999999999999999999999999999999999999999999996       


Q ss_pred             -------------CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         514 -------------SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 -------------g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                                   |.+|++|+.|++|++||+++++++..+.+|.+.|.++.|+|++++|++|+.|++|++|+
T Consensus       295 ~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd  366 (410)
T 1vyh_C          295 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD  366 (410)
T ss_dssp             GCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred             hhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence                         67899999999999999999999999999999999999999999999999999999997

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=5.1e-40  Score=330.20  Aligned_cols=309  Identities=18%  Similarity=0.237  Sum_probs=250.0

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+.+|.++|++++|+|  ++||+|+.||+|+|||+.++.....                                   
T Consensus         9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~-----------------------------------   51 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENP-----------------------------------   51 (397)
T ss_dssp             EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCG-----------------------------------
T ss_pred             hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccC-----------------------------------
Confidence            346789999999999999  8999999999999999987642100                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC----C---CeEEEEeCCCeEEEEECCCCee-----eEEecCC--
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN----G---RSLASGSGDTTVRFWDVTTQTP-----LFKCEGH--  248 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~----g---~~las~s~d~~i~iwd~~~~~~-----~~~~~~h--  248 (573)
                                    ..+...+.+|...|.+++|+|+    +   ++|++++.|+.|++||+.++..     +..+.+|  
T Consensus        52 --------------~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~  117 (397)
T 1sq9_A           52 --------------KDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDS  117 (397)
T ss_dssp             --------------GGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCT
T ss_pred             --------------CCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeeccccc
Confidence                          0011234479999999999999    9   9999999999999999988776     7888888  


Q ss_pred             ---CCcEEEEEEc----CCCCe-EEEEeeCCeEEEEECCC------Cceec----ccc-------cCCcccEEEEEeccc
Q psy2671         249 ---KHWVLCIAWS----PDSKQ-LVSGCKNGVIHAWDSST------GKQIG----QPM-------RGHKQWITALSWEPF  303 (573)
Q Consensus       249 ---~~~V~~v~~s----~dg~~-l~sgs~dg~i~vwd~~~------~~~~~----~~~-------~~h~~~v~~~~~~~~  303 (573)
                         ...|.+++|+    |++++ |++++.||.|++||+.+      ++.+.    ..+       ..|...|.++.|.| 
T Consensus       118 ~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-  196 (397)
T 1sq9_A          118 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE-  196 (397)
T ss_dssp             TGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT-
T ss_pred             ccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECC-
Confidence               5899999999    99999 99999999999999987      54432    022       44788899999877 


Q ss_pred             ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC---C---CccEEEEEECCCc-EEEEEeCC---CeEEEEeCCCCeee
Q psy2671         304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS---H---TRSVTCIRWGGSG-LIYSASQD---RTIKVWRASDGVMC  373 (573)
Q Consensus       304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h---~~~v~~~~~~~~~-~l~s~s~d---~~i~vw~~~~~~~~  373 (573)
                          ++ .+++++.||.|++||+..++.+..+..   |   ...|.+++|++++ .+++++.|   +.|++||++++...
T Consensus       197 ----~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~  271 (397)
T 1sq9_A          197 ----RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI  271 (397)
T ss_dssp             ----TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             ----Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence                45 899999999999999999999999888   8   9999999998776 68888888   89999998776544


Q ss_pred             EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccce
Q psy2671         374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL  453 (573)
Q Consensus       374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~  453 (573)
                      ..+.+...                                             +.                      ...
T Consensus       272 ~~~~~~~~---------------------------------------------~~----------------------~~~  284 (397)
T 1sq9_A          272 GSLSVPTH---------------------------------------------SS----------------------QAS  284 (397)
T ss_dssp             EEECBC--------------------------------------------------------------------------
T ss_pred             ceeccCcc---------------------------------------------cc----------------------ccc
Confidence            33321100                                             00                      000


Q ss_pred             eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec------CC---------------cceEEEEEECC
Q psy2671         454 ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR------GH---------------VQAVYMVAWSS  512 (573)
Q Consensus       454 ~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~------~h---------------~~~v~~v~~s~  512 (573)
                      .....|...|.+++|+|++++|++++.||.|++||.++++.+..+.      +|               ...|++++|+|
T Consensus       285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~  364 (397)
T 1sq9_A          285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK  364 (397)
T ss_dssp             -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred             ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence            1122377889999999999999999999999999999999999998      88               89999999999


Q ss_pred             CC----------CEEEEEeCCCcEEEEeCCccc
Q psy2671         513 DS----------RLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       513 dg----------~~las~s~D~~v~vwd~~~~~  535 (573)
                      ++          ++|++++.|+.|++|++++++
T Consensus       365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~  397 (397)
T 1sq9_A          365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK  397 (397)
T ss_dssp             TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred             ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence            98          799999999999999998763

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.1e-39  Score=313.95  Aligned_cols=261  Identities=23%  Similarity=0.401  Sum_probs=206.0

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|.++|.+++|+|+|++||||+.|++|+|||+.++..                                        
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~----------------------------------------   43 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH----------------------------------------   43 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB----------------------------------------
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc----------------------------------------
Confidence            4678999999999999999999999999999999864321                                        


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~d  260 (573)
                                   ++..++.||.++|.+++|+|+  +++||+|+.|++|+|||+.++.  .+..+.+|...|.+++|+|+
T Consensus        44 -------------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~  110 (297)
T 2pm7_B           44 -------------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPH  110 (297)
T ss_dssp             -------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCG
T ss_pred             -------------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcC
Confidence                         012345689999999999864  8999999999999999998763  56677899999999999997


Q ss_pred             --CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCC
Q psy2671         261 --SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSH  338 (573)
Q Consensus       261 --g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h  338 (573)
                        |.+|++|+.|+.|++||++++....                                              ...+.+|
T Consensus       111 ~~g~~l~s~s~d~~v~~wd~~~~~~~~----------------------------------------------~~~~~~h  144 (297)
T 2pm7_B          111 EYGPMLLVASSDGKVSVVEFKENGTTS----------------------------------------------PIIIDAH  144 (297)
T ss_dssp             GGCSEEEEEETTSEEEEEEBCSSSCBC----------------------------------------------CEEEECC
T ss_pred             CCCcEEEEEECCCcEEEEEecCCCcee----------------------------------------------eeeeecc
Confidence              8899999999999999986542110                                              0112345


Q ss_pred             CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       339 ~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ...|.+++|++++..                                                                 
T Consensus       145 ~~~v~~~~~~p~~~~-----------------------------------------------------------------  159 (297)
T 2pm7_B          145 AIGVNSASWAPATIE-----------------------------------------------------------------  159 (297)
T ss_dssp             SSCEEEEEECCCC-------------------------------------------------------------------
T ss_pred             cCccceEeecCCccc-----------------------------------------------------------------
Confidence            666666666543200                                                                 


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe----E
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK----F  494 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~----~  494 (573)
                              +.+                            .+       ...+++++||+|+.|++|++||.++++    .
T Consensus       160 --------~~~----------------------------~~-------~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~  196 (297)
T 2pm7_B          160 --------EDG----------------------------EH-------NGTKESRKFVTGGADNLVKIWKYNSDAQTYVL  196 (297)
T ss_dssp             -----------------------------------------------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred             --------ccc----------------------------cC-------CCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence                    000                            00       012357899999999999999988765    5


Q ss_pred             EEeecCCcceEEEEEECCCC---CEEEEEeCCCcEEEEeCCcccc---cccc--cCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         495 ITTLRGHVQAVYMVAWSSDS---RLLVSGSADSTLKVWNMKTKKI---EQDL--PGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       495 ~~~~~~h~~~v~~v~~s~dg---~~las~s~D~~v~vwd~~~~~~---~~~l--~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      ...+.+|...|.+++|+|++   ++||+++.|++|++||+++...   ...+  .+|.+.|++++|+|++++|++++.|+
T Consensus       197 ~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~  276 (297)
T 2pm7_B          197 ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN  276 (297)
T ss_dssp             EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred             EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC
Confidence            67889999999999999995   8999999999999999976431   1222  57888999999999999999999999


Q ss_pred             cEEEcc
Q psy2671         567 VLRLWQ  572 (573)
Q Consensus       567 ~i~iw~  572 (573)
                      +|++|+
T Consensus       277 ~v~lw~  282 (297)
T 2pm7_B          277 KVTLWK  282 (297)
T ss_dssp             CEEEEE
T ss_pred             cEEEEE
Confidence            999996

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.9e-39  Score=311.75  Aligned_cols=289  Identities=20%  Similarity=0.375  Sum_probs=242.4

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...+.+|.++|++++| |++++||+|+.||+|+|||+.++....                                   
T Consensus        10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~-----------------------------------   53 (313)
T 3odt_A           10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT-----------------------------------   53 (313)
T ss_dssp             EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE-----------------------------------
T ss_pred             HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE-----------------------------------
Confidence            44567899999999999 999999999999999999997654321                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEc
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s  258 (573)
                                          .+.+|...|.+++|+|++++|++|+.|+.|++|++...   +.+..+.+|...|.+++| 
T Consensus        54 --------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  112 (313)
T 3odt_A           54 --------------------VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-  112 (313)
T ss_dssp             --------------------EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE-
T ss_pred             --------------------EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe-
Confidence                                12358899999999999999999999999999998654   556778899999999999 


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-  337 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-  337 (573)
                       ++++|++++.||.|++||  .+... ..+..|...+.++.|.|.    +++.+++++.||.|++||  ..+....+.. 
T Consensus       113 -~~~~l~~~~~d~~i~~~d--~~~~~-~~~~~~~~~v~~~~~~~~----~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~  182 (313)
T 3odt_A          113 -QDGVVISGSWDKTAKVWK--EGSLV-YNLQAHNASVWDAKVVSF----SENKFLTASADKTIKLWQ--NDKVIKTFSGI  182 (313)
T ss_dssp             -ETTEEEEEETTSEEEEEE--TTEEE-EEEECCSSCEEEEEEEET----TTTEEEEEETTSCEEEEE--TTEEEEEECSS
T ss_pred             -cCCEEEEEeCCCCEEEEc--CCcEE-EecccCCCceeEEEEccC----CCCEEEEEECCCCEEEEe--cCceEEEEecc
Confidence             577999999999999999  33332 456789999999998763    467899999999999999  4566666666 


Q ss_pred             CCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       338 h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      |...+.+++|++++.+++++.|+.|++||++++..                                             
T Consensus       183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~---------------------------------------------  217 (313)
T 3odt_A          183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV---------------------------------------------  217 (313)
T ss_dssp             CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE---------------------------------------------
T ss_pred             CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh---------------------------------------------
Confidence            88999999998877788888888888888765432                                             


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                                         +..+.+|...|.+++|+|++ .|++++.||.|++||.++++.+..
T Consensus       218 -----------------------------------~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~  261 (313)
T 3odt_A          218 -----------------------------------LRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV  261 (313)
T ss_dssp             -----------------------------------EEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred             -----------------------------------hhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEE
Confidence                                               22334567789999999999 588999999999999999999999


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      +..|...|.+++|+|+++ +++++.|+.|++||+++++....
T Consensus       262 ~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~  302 (313)
T 3odt_A          262 ITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE  302 (313)
T ss_dssp             EECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred             EeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence            999999999999999998 55789999999999998876543

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.3e-39  Score=311.50  Aligned_cols=279  Identities=23%  Similarity=0.356  Sum_probs=226.8

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ..+.+|.+.|.+++| |++++|++|+.||.|++||+.++.....+..|...|.+++|+|++++|++|+.||.|++|++..
T Consensus        12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~   90 (313)
T 3odt_A           12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFA   90 (313)
T ss_dssp             EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTC
T ss_pred             HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeee
Confidence            457799999999999 9999999999999999999999988888899999999999999999999999999999999876


Q ss_pred             Cce--ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC
Q psy2671         281 GKQ--IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ  358 (573)
Q Consensus       281 ~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~  358 (573)
                      ...  ....+.+|...|.++.|.       ++.+++++.||.|++||  .++....+..|...+.++.|.+         
T Consensus        91 ~~~~~~~~~~~~~~~~i~~~~~~-------~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~---------  152 (313)
T 3odt_A           91 TSGEDPLYTLIGHQGNVCSLSFQ-------DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVS---------  152 (313)
T ss_dssp             CTTSCC-CEECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEE---------
T ss_pred             cCCCCcccchhhcccCEEEEEec-------CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEcc---------
Confidence            431  123345666777777662       34667777777777777  4455555566666666655533         


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                                                                                          +++..+++++.|
T Consensus       153 --------------------------------------------------------------------~~~~~l~~~~~d  164 (313)
T 3odt_A          153 --------------------------------------------------------------------FSENKFLTASAD  164 (313)
T ss_dssp             --------------------------------------------------------------------TTTTEEEEEETT
T ss_pred             --------------------------------------------------------------------CCCCEEEEEECC
Confidence                                                                                123445555555


Q ss_pred             CeEEEEcCCCCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l  517 (573)
                      +.+++||..   .....+.. |...|.+++|+|++. +++++.||.|++||.++++.+..+.+|...|++++|+|++ .|
T Consensus       165 ~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l  239 (313)
T 3odt_A          165 KTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI  239 (313)
T ss_dssp             SCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred             CCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence            555555521   12233333 778899999999998 9999999999999999999999999999999999999999 68


Q ss_pred             EEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++.|+.|++||+++++....+..|...|.+++|+|+++ +++++.|+.|++|+
T Consensus       240 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~  293 (313)
T 3odt_A          240 VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS  293 (313)
T ss_dssp             EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred             EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence            8999999999999999999999999999999999999998 67799999999997

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=322.48  Aligned_cols=299  Identities=17%  Similarity=0.289  Sum_probs=237.1

Q ss_pred             CCCccccEEEEEEcCCCCe-eEEeeC---CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         106 MPGHAEAVISVKFSPNGRS-LASGSG---DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~~-lat~s~---D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +.+|.+.|.+++|+|+++. +++|+.   |++|+|||+.+++....                                  
T Consensus        14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~----------------------------------   59 (357)
T 3i2n_A           14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL----------------------------------   59 (357)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE----------------------------------
T ss_pred             ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccce----------------------------------
Confidence            4579999999999999964 556665   99999999987653210                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC---CCeEEEEeCCCeEEEEECCCCe-eeEEecCCCCcEEEEE-
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN---GRSLASGSGDTTVRFWDVTTQT-PLFKCEGHKHWVLCIA-  256 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~---g~~las~s~d~~i~iwd~~~~~-~~~~~~~h~~~V~~v~-  256 (573)
                                          ...+|...|.+++|+|+   +++|++|+.|+.|++||+.+++ ++..+.+|...|.+++ 
T Consensus        60 --------------------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~  119 (357)
T 3i2n_A           60 --------------------REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDG  119 (357)
T ss_dssp             --------------------EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEE
T ss_pred             --------------------eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEee
Confidence                                01157889999999998   6999999999999999999887 8888999999999995 


Q ss_pred             -----EcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc----ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         257 -----WSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK----QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       257 -----~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                           |+|++++|++++.||.|++||+.++......+..|.    ..+.++.|.+. ++++++.+++++.||.|++||+.
T Consensus       120 ~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~l~~~~~d~~i~i~d~~  198 (357)
T 3i2n_A          120 IGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA-YNQEERVVCAGYDNGDIKLFDLR  198 (357)
T ss_dssp             ESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC-CC-CCCEEEEEETTSEEEEEETT
T ss_pred             ccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec-cCCCCCEEEEEccCCeEEEEECc
Confidence                 578999999999999999999998763333333333    37888886542 23467899999999999999999


Q ss_pred             CCeEEEEecCCCccEEEEEECC---C-cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671         328 LSQCVRVLTSHTRSVTCIRWGG---S-GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG  403 (573)
Q Consensus       328 ~~~~~~~~~~h~~~v~~~~~~~---~-~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~  403 (573)
                      .++... ...|...|.+++|++   + ..+++++.|+.|++||++++.....                            
T Consensus       199 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~----------------------------  249 (357)
T 3i2n_A          199 NMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG----------------------------  249 (357)
T ss_dssp             TTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE----------------------------
T ss_pred             cCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc----------------------------
Confidence            887644 466888999999986   4 4678888888888887653221100                            


Q ss_pred             eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCC
Q psy2671         404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDK  482 (573)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg  482 (573)
                                                                     .......+|...|++++|+|+++ +|++|+.||
T Consensus       250 -----------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg  282 (357)
T 3i2n_A          250 -----------------------------------------------FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG  282 (357)
T ss_dssp             -----------------------------------------------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred             -----------------------------------------------eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC
Confidence                                                           00112346788899999999998 899999999


Q ss_pred             cEEEEeCCCC-------------------eEEEeecCCcceEEEEEECCCCCEEE-EEeCCCcEEEEeCCccc
Q psy2671         483 SIKLWDGRIG-------------------KFITTLRGHVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKK  535 (573)
Q Consensus       483 ~i~lwd~~~~-------------------~~~~~~~~h~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~~~~  535 (573)
                      .|++||.+.+                   +.+..+.+|...|++++|+|++++|+ +++.|+.|++||+.+.+
T Consensus       283 ~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          283 GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            9999998643                   46777889999999999999999998 89999999999997654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.4e-39  Score=327.10  Aligned_cols=289  Identities=20%  Similarity=0.281  Sum_probs=236.5

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe------eeEEecCCCCcEEEEEEcCC----C---CeEEEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT------PLFKCEGHKHWVLCIAWSPD----S---KQLVSG  267 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~------~~~~~~~h~~~V~~v~~s~d----g---~~l~sg  267 (573)
                      ..+.+|.+.|++++|+|  ++|++|+.|++|++||+.+++      .+..+.+|...|.+++|+|+    +   ++|+++
T Consensus        10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~   87 (397)
T 1sq9_A           10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   87 (397)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence            45789999999999999  799999999999999999887      67888899999999999999    9   999999


Q ss_pred             eeCCeEEEEECCCCce----ecccccCC-----cccEEEEEecccccCCCCCE-EEEEeCCCcEEEEECCC------CeE
Q psy2671         268 CKNGVIHAWDSSTGKQ----IGQPMRGH-----KQWITALSWEPFHLNHQCRR-FASSGKDGAIRIWDVIL------SQC  331 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~----~~~~~~~h-----~~~v~~~~~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~------~~~  331 (573)
                      +.||.|++||+.++..    ....+.+|     ...|.++.|.+.. .++++. +++++.||.|++||+..      ++.
T Consensus        88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  166 (397)
T 1sq9_A           88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN-DRLLSHRLVATDVKGTTYIWKFHPFADESNSLT  166 (397)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred             cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc-CCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence            9999999999987764    12345667     5899999998210 025678 99999999999999877      444


Q ss_pred             EE-----Ee-------cCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         332 VR-----VL-------TSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       332 ~~-----~~-------~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      +.     .+       ..|...|.+++|++++.+++++.|+.|++||++++.                            
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------------------------  218 (397)
T 1sq9_A          167 LNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLR----------------------------  218 (397)
T ss_dssp             TCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTE----------------------------
T ss_pred             eeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCc----------------------------
Confidence            33     33       235555555555544444444455555555544332                            


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc---c---cccEEEEEECCCCC
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG---H---QQLINCVEFSPDGR  473 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h---~~~v~~v~~sp~g~  473 (573)
                                                                          .+..+..   |   ...|.+++|+|+++
T Consensus       219 ----------------------------------------------------~~~~~~~~~~h~~~~~~i~~i~~~~~~~  246 (397)
T 1sq9_A          219 ----------------------------------------------------PLYNFESQHSMINNSNSIRSVKFSPQGS  246 (397)
T ss_dssp             ----------------------------------------------------EEEEEECCC---CCCCCEEEEEECSSTT
T ss_pred             ----------------------------------------------------eeEEEeccccccccCCccceEEECCCCC
Confidence                                                                2333344   6   77899999999999


Q ss_pred             EEEEeeCC---CcEEEEeCCCCeEEEeecC-------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         474 IIASASFD---KSIKLWDGRIGKFITTLRG-------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       474 ~las~s~d---g~i~lwd~~~~~~~~~~~~-------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                      +|++++.|   |.|++||.++++.+..+.+             |...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus       247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  326 (397)
T 1sq9_A          247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI  326 (397)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred             EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence            99999999   9999999999999999998             9999999999999999999999999999999999988


Q ss_pred             cccc------Cc---------------CCCEEEEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671         538 QDLP------GH---------------GDEVYAVDWAPDG----------EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       538 ~~l~------~h---------------~~~v~~~~~s~d~----------~~l~s~~~d~~i~iw~  572 (573)
                      ..+.      +|               ...|++++|+|++          ++|++++.|+.|++|+
T Consensus       327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~  392 (397)
T 1sq9_A          327 TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  392 (397)
T ss_dssp             EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence            8888      78               9999999999998          7999999999999997

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=4.2e-40  Score=334.77  Aligned_cols=309  Identities=18%  Similarity=0.259  Sum_probs=234.2

Q ss_pred             cCCCccccEEEEEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ...+|...|+||+||| ++++||+|+.||+|+|||+.++....                                     
T Consensus       114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~-------------------------------------  156 (435)
T 4e54_B          114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT-------------------------------------  156 (435)
T ss_dssp             EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE-------------------------------------
T ss_pred             cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee-------------------------------------
Confidence            3456899999999999 56799999999999999998664221                                     


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEcCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSPD  260 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s~d  260 (573)
                                      ...+.||.+.|++++|+| ++.+|++|+.|++|++||++++.......  .+...+.+++|+|+
T Consensus       157 ----------------~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (435)
T 4e54_B          157 ----------------FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSAS  220 (435)
T ss_dssp             ----------------EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETT
T ss_pred             ----------------EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCC
Confidence                            123568999999999998 68899999999999999998765433333  34456889999999


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE---EecC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR---VLTS  337 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~  337 (573)
                      +++|++|+.||.|++||++.. .+ ..+.+|...|.+++|.|.    ....+++++.|++|++||+...+...   ...+
T Consensus       221 ~~~l~~g~~dg~i~~wd~~~~-~~-~~~~~h~~~v~~v~~~p~----~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~  294 (435)
T 4e54_B          221 SRMVVTGDNVGNVILLNMDGK-EL-WNLRMHKKKVTHVALNPC----CDWFLATASVDQTVKIWDLRQVRGKASFLYSLP  294 (435)
T ss_dssp             TTEEEEECSSSBEEEEESSSC-BC-CCSBCCSSCEEEEEECTT----CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCB
T ss_pred             CCEEEEEeCCCcEeeeccCcc-ee-EEEecccceEEeeeecCC----CceEEEEecCcceeeEEecccccccceEEEeee
Confidence            999999999999999998653 33 457899999999999873    23478899999999999998765433   3357


Q ss_pred             CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      |...|.+++|++++ .|++++.|++|++|++.++.....+.+|......                    .          
T Consensus       295 h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~--------------------~----------  344 (435)
T 4e54_B          295 HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ--------------------H----------  344 (435)
T ss_dssp             CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS--------------------S----------
T ss_pred             ccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc--------------------c----------
Confidence            99999999999887 7999999999999999988766655554321000                    0          


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEE
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFI  495 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~  495 (573)
                                  ...+        -..|.             ....+..+.+++++..+++++ .++.|++||..+++.+
T Consensus       345 ------------~~~~--------~~~~~-------------~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~  391 (435)
T 4e54_B          345 ------------LTPI--------KAAWH-------------PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM  391 (435)
T ss_dssp             ------------SCCC--------BCEEC-------------SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred             ------------ceeE--------EEEEc-------------CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence                        0000        00111             112234456667766655544 4568999999999988


Q ss_pred             Eeec-CCcceEEEE-EECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         496 TTLR-GHVQAVYMV-AWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       496 ~~~~-~h~~~v~~v-~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      ..+. +|...|.++ +|+|+|++||+|+ |++|+||++++++.
T Consensus       392 ~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~  433 (435)
T 4e54_B          392 CQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART  433 (435)
T ss_dssp             EEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred             EEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence            8765 677888887 6999999999876 78999999988764

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.1e-39  Score=323.66  Aligned_cols=304  Identities=19%  Similarity=0.318  Sum_probs=240.4

Q ss_pred             CCCccccEEEEEEcCC----CCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         106 MPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~----~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +.+|.++|++++|+|+    ...+++++.++.|+|||+.++..+.....                               
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~-------------------------------   62 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQS-------------------------------   62 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEE-------------------------------
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeee-------------------------------
Confidence            4589999999999984    55677777778999999987654321110                               


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC----CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW  257 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~----g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~  257 (573)
                                         .....|...|.+++|+|+    +++|++|+.|+.|++||+.+++.+..+.+|...|.+++|
T Consensus        63 -------------------~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~  123 (366)
T 3k26_A           63 -------------------YVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKF  123 (366)
T ss_dssp             -------------------EECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEE
T ss_pred             -------------------ccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEE
Confidence                               112347889999999999    679999999999999999999999999999999999999


Q ss_pred             cC-CCCeEEEEeeCCeEEEEECCCCceeccc--ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         258 SP-DSKQLVSGCKNGVIHAWDSSTGKQIGQP--MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       258 s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      +| ++.+|++|+.||.|++||+++++.+...  +.+|...|.++.|.|     +++++++++.||.|++||+..++....
T Consensus       124 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~i~d~~~~~~~~~  198 (366)
T 3k26_A          124 HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL-----LGEKIMSCGMDHSLKLWRINSKRMMNA  198 (366)
T ss_dssp             CSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESCSHHHHHH
T ss_pred             CCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC-----CCCEEEEecCCCCEEEEECCCCccccc
Confidence            99 9999999999999999999988765432  268999999999987     567999999999999999987654433


Q ss_pred             ec----------------------------CCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe-ccCCcceeeE
Q psy2671         335 LT----------------------------SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNT  385 (573)
Q Consensus       335 ~~----------------------------~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~-~~~~~~~v~~  385 (573)
                      +.                            .|...|.+++|+ ...+++++.|+.|++||+.++..... +..+      
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~------  271 (366)
T 3k26_A          199 IKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPS------  271 (366)
T ss_dssp             HHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTT------
T ss_pred             cceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccC------
Confidence            32                            267777777776 44677777777777777654321100 0000      


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEE
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC  465 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~  465 (573)
                                                                                   ......+..+.+|...|.+
T Consensus       272 -------------------------------------------------------------~~~~~~~~~~~~~~~~v~~  290 (366)
T 3k26_A          272 -------------------------------------------------------------ESNVTILGRFDYSQCDIWY  290 (366)
T ss_dssp             -------------------------------------------------------------CCCEEEEEEEECSSCCSSC
T ss_pred             -------------------------------------------------------------CcchheeccccccCCcEEE
Confidence                                                                         0001224456678888999


Q ss_pred             EEECCC--CCEEEEeeCCCcEEEEeCCCCe----EEEeecCC--cceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         466 VEFSPD--GRIIASASFDKSIKLWDGRIGK----FITTLRGH--VQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       466 v~~sp~--g~~las~s~dg~i~lwd~~~~~----~~~~~~~h--~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ++|+|+  +++|++|+.||.|++||..+++    ....+.+|  ...|++++|+|++++|++++.|+.|++||+.
T Consensus       291 ~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          291 MRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             EEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            999999  9999999999999999999875    44577777  7899999999999999999999999999985

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2.5e-38  Score=320.27  Aligned_cols=298  Identities=23%  Similarity=0.418  Sum_probs=235.2

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      +..|+||++ ++||+| .|++|+|||..+++++..                                             
T Consensus       108 ~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~---------------------------------------------  140 (420)
T 4gga_A          108 LNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQL---------------------------------------------  140 (420)
T ss_dssp             CBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEE---------------------------------------------
T ss_pred             ceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEE---------------------------------------------
Confidence            567899975 577766 499999999998865421                                             


Q ss_pred             EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                              ..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+++.+..+.+|...+.+++|+  +..|++|+.|+.
T Consensus       141 --------~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~  210 (420)
T 4gga_A          141 --------LQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGH  210 (420)
T ss_dssp             --------EECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred             --------EEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCc
Confidence                    1245788999999999999999999999999999999999999999999999998875  679999999999


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe----EEEEecCCCccEEEEEEC
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~  348 (573)
                      +++||..........+.+|...+..+.|.|     +++.+++++.|+.+++|+...++    .+.....|...|.+++|+
T Consensus       211 i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~-----~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~  285 (420)
T 4gga_A          211 IHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC  285 (420)
T ss_dssp             EEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEEC
T ss_pred             eeEeeecccceeeEEecccccceeeeeecC-----CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeC
Confidence            999999887666566789999999999876     56899999999999999997654    345667899999999998


Q ss_pred             CCc--EEEE--EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         349 GSG--LIYS--ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       349 ~~~--~l~s--~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      +.+  .+++  |+.|++|++||+.++.....                                                 
T Consensus       286 p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~-------------------------------------------------  316 (420)
T 4gga_A          286 PWQSNVLATGGGTSDRHIRIWNVCSGACLSA-------------------------------------------------  316 (420)
T ss_dssp             TTCTTEEEEEECTTTCEEEEEETTTTEEEEE-------------------------------------------------
T ss_pred             CCcccEEEEEeecCCCEEEEEeCCcccccee-------------------------------------------------
Confidence            653  4443  34677777777765543221                                                 


Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEeecCCc
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                     +.. ...+.++.|+|+++.+++++  .|+.|++||..+++.+.++.+|.
T Consensus       317 -------------------------------~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~  364 (420)
T 4gga_A          317 -------------------------------VDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT  364 (420)
T ss_dssp             -------------------------------EEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred             -------------------------------ecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence                                           111 23578889999999888765  79999999999999999999999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                      ..|++++|+|||++||||+.|++|+|||+......+....+...+....+.
T Consensus       365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~  415 (420)
T 4gga_A          365 SRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLI  415 (420)
T ss_dssp             SCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------------
T ss_pred             CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccC
Confidence            999999999999999999999999999998766655555555444444443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.1e-39  Score=320.46  Aligned_cols=299  Identities=16%  Similarity=0.252  Sum_probs=247.5

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK  282 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~  282 (573)
                      .|.++|.+++|+|++++|++|+.|+.|++||+.+++  .+..+.+|...|.+++|+|++++|++++.||.|++||+++++
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   85 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence            588999999999999999999999999999999887  788889999999999999999999999999999999998876


Q ss_pred             eec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe----EEEEecCCCccEEEEEECCCc-EEEEE
Q psy2671         283 QIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ----CVRVLTSHTRSVTCIRWGGSG-LIYSA  356 (573)
Q Consensus       283 ~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~-~l~s~  356 (573)
                      ... ....+|...|.++.|.|     +++++++++.||.|++||+....    .......|...|.+++|++++ .++++
T Consensus        86 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  160 (372)
T 1k8k_C           86 WKPTLVILRINRAARCVRWAP-----NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG  160 (372)
T ss_dssp             EEEEEECCCCSSCEEEEEECT-----TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred             eeeeEEeecCCCceeEEEECC-----CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence            332 23467889999999976     56799999999999999998765    233346789999999999876 78899


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      +.|+.|++||++.........                                                           
T Consensus       161 ~~dg~i~~~d~~~~~~~~~~~-----------------------------------------------------------  181 (372)
T 1k8k_C          161 SCDFKCRIFSAYIKEVEERPA-----------------------------------------------------------  181 (372)
T ss_dssp             ETTSCEEEEECCCTTTSCCCC-----------------------------------------------------------
T ss_pred             cCCCCEEEEEccccccccccc-----------------------------------------------------------
Confidence            999999999976432100000                                                           


Q ss_pred             CCCeEEEEcC-CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671         437 DDFTLFLWNP-EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       437 ~dg~i~lwd~-~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                          ...|.. .........+.+|...|.+++|+|++++|++++.||.|++||.++++.+..+..|...|.+++|+|+++
T Consensus       182 ----~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~  257 (372)
T 1k8k_C          182 ----PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESS  257 (372)
T ss_dssp             ----CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTE
T ss_pred             ----ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCC
Confidence                000110 011233445567888999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCc--cc--------------------------------cc------ccc-cCcCCCEEEEEEc-
Q psy2671         516 LLVSGSADSTLKVWNMKT--KK--------------------------------IE------QDL-PGHGDEVYAVDWA-  553 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~--~~--------------------------------~~------~~l-~~h~~~v~~~~~s-  553 (573)
                      +|+++ .|+.|++|++..  ++                                ..      ..+ .+|.+.|++++|+ 
T Consensus       258 ~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~  336 (372)
T 1k8k_C          258 LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLS  336 (372)
T ss_dssp             EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEE
T ss_pred             EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEec
Confidence            98887 899999999977  32                                00      233 4899999999977 


Q ss_pred             cCC---CEEEEeeCCCcEEEcc
Q psy2671         554 PDG---EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       554 ~d~---~~l~s~~~d~~i~iw~  572 (573)
                      ++|   ++|+|++.||.|++|+
T Consensus       337 ~~g~~~~~l~s~~~Dg~i~~W~  358 (372)
T 1k8k_C          337 GGKAKCSQFCTTGMDGGMSIWD  358 (372)
T ss_dssp             STTTSCSEEEEEETTSEEEEEE
T ss_pred             CCCcceeeEEEecCCCceEEEE
Confidence            566   8999999999999997

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.8e-39  Score=321.65  Aligned_cols=291  Identities=15%  Similarity=0.256  Sum_probs=229.2

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      .|.++|++++|+|++++||+|+.|+.|+|||+.+++..                                          
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~------------------------------------------   43 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV------------------------------------------   43 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE------------------------------------------
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE------------------------------------------
Confidence            49999999999999999999999999999998765310                                          


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee--EEecCCCCcEEEEEEcCCCCeEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                                 +...+.+|...|.+++|+|++++|++++.|+.|++||+.+++..  ..+.+|...|.+++|+|++++|+
T Consensus        44 -----------~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  112 (372)
T 1k8k_C           44 -----------QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFA  112 (372)
T ss_dssp             -----------EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEE
T ss_pred             -----------eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEE
Confidence                       01234579999999999999999999999999999999887643  34578999999999999999999


Q ss_pred             EEeeCCeEEEEECCCCce---ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC---------------
Q psy2671         266 SGCKNGVIHAWDSSTGKQ---IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI---------------  327 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~---------------  327 (573)
                      +++.|+.|++||++.+..   ......+|...|.++.|.|     +++++++++.||.|++||+.               
T Consensus       113 ~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~  187 (372)
T 1k8k_C          113 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-----NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGS  187 (372)
T ss_dssp             EEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-----TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBS
T ss_pred             EEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-----CCCEEEEEcCCCCEEEEEccccccccccccccccc
Confidence            999999999999988763   2334467899999999987     56789999999999999964               


Q ss_pred             ---CCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         328 ---LSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       328 ---~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                         .++.+..+..|...|.+++|+++                                                      
T Consensus       188 ~~~~~~~~~~~~~~~~~v~~~~~~~~------------------------------------------------------  213 (372)
T 1k8k_C          188 KMPFGELMFESSSSCGWVHGVCFSAN------------------------------------------------------  213 (372)
T ss_dssp             CCCTTCEEEECCCCSSCEEEEEECSS------------------------------------------------------
T ss_pred             ccchhhheEecCCCCCeEEEEEECCC------------------------------------------------------
Confidence               33444444455555555555443                                                      


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                              +.++++++.|+.|++||+++.. .+..+..|...|.+++|+|+++++++| .|+.|
T Consensus       214 ------------------------~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i  267 (372)
T 1k8k_C          214 ------------------------GSRVAWVSHDSTVCLADADKKM-AVATLASETLPLLAVTFITESSLVAAG-HDCFP  267 (372)
T ss_dssp             ------------------------SSEEEEEETTTEEEEEEGGGTT-EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSC
T ss_pred             ------------------------CCEEEEEeCCCEEEEEECCCCc-eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeE
Confidence                                    4455555555555555554332 344556677789999999999988888 89999


Q ss_pred             EEEeCCC--CeE--------------------------------E------Eee-cCCcceEEEEEEC-CCC---CEEEE
Q psy2671         485 KLWDGRI--GKF--------------------------------I------TTL-RGHVQAVYMVAWS-SDS---RLLVS  519 (573)
Q Consensus       485 ~lwd~~~--~~~--------------------------------~------~~~-~~h~~~v~~v~~s-~dg---~~las  519 (573)
                      ++||.+.  ++.                                .      ..+ .+|...|++++|+ ++|   ++|++
T Consensus       268 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s  347 (372)
T 1k8k_C          268 VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCT  347 (372)
T ss_dssp             EEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEE
T ss_pred             EEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEE
Confidence            9999877  421                                0      233 4899999999966 677   99999


Q ss_pred             EeCCCcEEEEeCCcccc
Q psy2671         520 GSADSTLKVWNMKTKKI  536 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~~~  536 (573)
                      |+.||.|++|++.+++.
T Consensus       348 ~~~Dg~i~~W~~~~~~~  364 (372)
T 1k8k_C          348 TGMDGGMSIWDVRSLES  364 (372)
T ss_dssp             EETTSEEEEEEHHHHHH
T ss_pred             ecCCCceEEEEecChhH
Confidence            99999999999987653

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=4.6e-39  Score=321.71  Aligned_cols=285  Identities=16%  Similarity=0.240  Sum_probs=233.9

Q ss_pred             CCCCCCCcEEEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEec--CCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEE
Q psy2671         202 SMPGHAEAVISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~--~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd  277 (573)
                      .+.+|.+.|.+++|+|++ ++|++|+.|++|+|||+.+++....+.  +|...|.+++|+| ++++|++++.|+.|++||
T Consensus        68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd  147 (383)
T 3ei3_B           68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD  147 (383)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred             eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence            457899999999999999 999999999999999999877665554  7999999999999 789999999999999999


Q ss_pred             CCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671         278 SSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIY  354 (573)
Q Consensus       278 ~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~  354 (573)
                      +++..... ....+|...|.+++|.|     +++.+++++.|+.|++||+ .++++..+.+|...|.+++|++++  .++
T Consensus       148 ~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  221 (383)
T 3ei3_B          148 FSGSVIQVFAKTDSWDYWYCCVDVSV-----SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA  221 (383)
T ss_dssp             TTSCEEEEEECCCCSSCCEEEEEEET-----TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred             CCCCceEEEeccCCCCCCeEEEEECC-----CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence            98643211 12234558899999977     5679999999999999998 577788888999999999998775  577


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +++.|++|++||++++..                                                              
T Consensus       222 s~~~d~~i~iwd~~~~~~--------------------------------------------------------------  239 (383)
T 3ei3_B          222 TSSVDATVKLWDLRNIKD--------------------------------------------------------------  239 (383)
T ss_dssp             EEETTSEEEEEEGGGCCS--------------------------------------------------------------
T ss_pred             EEeCCCEEEEEeCCCCCc--------------------------------------------------------------
Confidence            888888888887654210                                                              


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----------
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITTLRGHV-----------  502 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----------  502 (573)
                                    ....+.. .+|...|.+++|+| ++++|++++.|+.|++||.++++.+..+.+|.           
T Consensus       240 --------------~~~~~~~-~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  304 (383)
T 3ei3_B          240 --------------KNSYIAE-MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK  304 (383)
T ss_dssp             --------------TTCEEEE-EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred             --------------ccceEEE-ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceE
Confidence                          0011112 25778899999999 99999999999999999999887666665442           


Q ss_pred             ------ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC--cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 ------QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG--HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ------~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~--h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                            ..+..++|+|||++  +++.|+.|++||+.+++.+..+.+  |...+..++|+|++++|++++ |+.|++|+
T Consensus       305 ~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~  379 (383)
T 3ei3_B          305 ATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWN  379 (383)
T ss_dssp             CEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred             EeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEe
Confidence                  23455777788877  788999999999999999888877  557788889999999999997 99999997

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=5.8e-39  Score=323.44  Aligned_cols=328  Identities=19%  Similarity=0.319  Sum_probs=235.8

Q ss_pred             CCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEe-------------cCCCCcEEEEEEcC-CCCeEEE
Q psy2671         202 SMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKC-------------EGHKHWVLCIAWSP-DSKQLVS  266 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~-------------~~h~~~V~~v~~s~-dg~~l~s  266 (573)
                      .+.+|.+.|++++|+| ++++|++|+.||.|++||+.++......             .+|...|.+++|+| ++.+|++
T Consensus        38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s  117 (408)
T 4a11_B           38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS  117 (408)
T ss_dssp             ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred             eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence            3568999999999999 9999999999999999999887544332             36999999999999 7789999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      ++.||.|++||+.+++....  ..+...+.++.|.|..  .++..+++++.||.|++||+..++....+..|...|.+++
T Consensus       118 ~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~  193 (408)
T 4a11_B          118 SSFDKTLKVWDTNTLQTADV--FNFEETVYSHHMSPVS--TKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS  193 (408)
T ss_dssp             EETTSEEEEEETTTTEEEEE--EECSSCEEEEEECSSC--SSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred             EeCCCeEEEeeCCCCcccee--ccCCCceeeeEeecCC--CCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence            99999999999998876533  2366778889888753  3556899999999999999999999999999999999999


Q ss_pred             ECCCc--EEEEEeCCCeEEEEeCCCCe-eeEec---------------cCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         347 WGGSG--LIYSASQDRTIKVWRASDGV-MCRTL---------------EGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       347 ~~~~~--~l~s~s~d~~i~vw~~~~~~-~~~~~---------------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                      |++++  .+++++.|+.|++||++++. ....+               .+|...|..+++                    
T Consensus       194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------------------  253 (408)
T 4a11_B          194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF--------------------  253 (408)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE--------------------
T ss_pred             ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE--------------------
Confidence            99886  58899999999999998764 33333               344444444444                    


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee----ccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM----TGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~----~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                       +|++.++++++.||.+++||+.+........    ......+........+..+++++.|+.|
T Consensus       254 -----------------~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  316 (408)
T 4a11_B          254 -----------------TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTI  316 (408)
T ss_dssp             -----------------CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEE
T ss_pred             -----------------cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEE
Confidence                             3678899999999999999998764322111    0111112222223345566777889999


Q ss_pred             EEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEcc-CCCEEEEee
Q psy2671         485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP-DGEKVASGG  563 (573)
Q Consensus       485 ~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~-d~~~l~s~~  563 (573)
                      ++||..+++.+..+.+|...|++++|+|++++|++++.||.|++||+.+++.+.....+...   ..+.+ +...+.+++
T Consensus       317 ~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  393 (408)
T 4a11_B          317 AVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSD  393 (408)
T ss_dssp             EEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------------------------------
T ss_pred             EEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccC
Confidence            99999999999999999999999999999999999999999999999998876554433221   23333 233455677


Q ss_pred             CCCcEEEccC
Q psy2671         564 KDKVLRLWQN  573 (573)
Q Consensus       564 ~d~~i~iw~~  573 (573)
                      .|+.+++|++
T Consensus       394 ~~~~~~~W~~  403 (408)
T 4a11_B          394 EEGGTSAWSH  403 (408)
T ss_dssp             ----------
T ss_pred             ccCceeecCC
Confidence            8899999974

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=4e-39  Score=318.57  Aligned_cols=294  Identities=16%  Similarity=0.297  Sum_probs=236.1

Q ss_pred             CCCCCCcEEEEEEcCCCCeEE-EEeC---CCeEEEEECCCCeeeEE-ecCCCCcEEEEEEcCC---CCeEEEEeeCCeEE
Q psy2671         203 MPGHAEAVISVKFSPNGRSLA-SGSG---DTTVRFWDVTTQTPLFK-CEGHKHWVLCIAWSPD---SKQLVSGCKNGVIH  274 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~la-s~s~---d~~i~iwd~~~~~~~~~-~~~h~~~V~~v~~s~d---g~~l~sgs~dg~i~  274 (573)
                      +.+|.+.|.+++|+|++..++ +|+.   |++|++||+.+++.... ..+|...|.+++|+|+   +++|++|+.||.|+
T Consensus        14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~   93 (357)
T 3i2n_A           14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH   93 (357)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred             ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence            357999999999999996554 5554   99999999998775533 3478999999999998   69999999999999


Q ss_pred             EEECCCCceecccccCCcccEEEEEeccc-ccCCCCCEEEEEeCCCcEEEEECCCCe-EEEEecCCCc----cEEEEEEC
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPF-HLNHQCRRFASSGKDGAIRIWDVILSQ-CVRVLTSHTR----SVTCIRWG  348 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~h~~----~v~~~~~~  348 (573)
                      +||+.+++.....+.+|...|.++.|.+. .++++++.+++++.||.|++||+..++ ....+..|..    .+.++.|.
T Consensus        94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  173 (357)
T 3i2n_A           94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFG  173 (357)
T ss_dssp             EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEE
T ss_pred             EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEE
Confidence            99999887344567799999999988763 345678899999999999999998765 4555544433    34444321


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      .                                                                          ..+|+
T Consensus       174 ~--------------------------------------------------------------------------~~~~~  179 (357)
T 3i2n_A          174 N--------------------------------------------------------------------------AYNQE  179 (357)
T ss_dssp             C--------------------------------------------------------------------------CCC-C
T ss_pred             e--------------------------------------------------------------------------ccCCC
Confidence            0                                                                          01245


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC---CCCEEEEeeCCCcEEEEeCCCCeEEEee-----cC
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP---DGRIIASASFDKSIKLWDGRIGKFITTL-----RG  500 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp---~g~~las~s~dg~i~lwd~~~~~~~~~~-----~~  500 (573)
                      +.++++++.||.|++||+++...  .....|...|.+++|+|   ++.+|++++.||.|++||.++++.+..+     .+
T Consensus       180 ~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~  257 (357)
T 3i2n_A          180 ERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKA  257 (357)
T ss_dssp             CCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEEC
T ss_pred             CCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCC
Confidence            66777777778888887766543  33456778899999999   9999999999999999999876654444     38


Q ss_pred             CcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcc-------------------cccccccCcCCCEEEEEEccCCCEEE
Q psy2671         501 HVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTK-------------------KIEQDLPGHGDEVYAVDWAPDGEKVA  560 (573)
Q Consensus       501 h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~-------------------~~~~~l~~h~~~v~~~~~s~d~~~l~  560 (573)
                      |...|++++|+|+++ +|++++.|+.|++||++.+                   +.+..+.+|.+.|++++|+|++++|+
T Consensus       258 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~  337 (357)
T 3i2n_A          258 HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC  337 (357)
T ss_dssp             CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE
T ss_pred             CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE
Confidence            999999999999999 8999999999999999754                   34566788999999999999999998


Q ss_pred             -EeeCCCcEEEcc
Q psy2671         561 -SGGKDKVLRLWQ  572 (573)
Q Consensus       561 -s~~~d~~i~iw~  572 (573)
                       +++.|+.|++|+
T Consensus       338 ~s~~~d~~i~iw~  350 (357)
T 3i2n_A          338 VCSSFDQTVRVLI  350 (357)
T ss_dssp             EEEETTSEEEEEE
T ss_pred             EEecCCCcEEEEE
Confidence             899999999997

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=6.6e-39  Score=317.43  Aligned_cols=288  Identities=15%  Similarity=0.140  Sum_probs=220.7

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCC-------eEEEEECCCCee----------eEEecCCCCcEEEEEEcCCCCeEEEEeeC
Q psy2671         208 EAVISVKFSPNGRSLASGSGDT-------TVRFWDVTTQTP----------LFKCEGHKHWVLCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~-------~i~iwd~~~~~~----------~~~~~~h~~~V~~v~~s~dg~~l~sgs~d  270 (573)
                      -||.|++|+|||++|++||+|.       .|++|++.....          ...+.+|...|.+++++  ++.+++|+.+
T Consensus        15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~   92 (365)
T 4h5i_A           15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNE   92 (365)
T ss_dssp             SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCC
T ss_pred             CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECC
Confidence            4799999999999999998754       599999875421          13467888889888765  5577777654


Q ss_pred             CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEE-----ecCCCcc
Q psy2671         271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRV-----LTSHTRS  341 (573)
Q Consensus       271 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~-----~~~h~~~  341 (573)
                      +..++|                                     +++.|+.+|+|++.....    ...     ...+...
T Consensus        93 ~~~~l~-------------------------------------s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (365)
T 4h5i_A           93 NSTKIT-------------------------------------QGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDY  135 (365)
T ss_dssp             CHHHHH-------------------------------------HTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCC
T ss_pred             CccEEE-------------------------------------EecCCCcEEEEEecCCCceEEEeeeeceeecCCcccC
Confidence            432222                                     223344455554432210    111     1234456


Q ss_pred             EEEEEECCCcE-EE--EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         342 VTCIRWGGSGL-IY--SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       342 v~~~~~~~~~~-l~--s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      +.+++|+++|. ++  +++.|++|++||++++.....+. |...|.+++++                             
T Consensus       136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fs-----------------------------  185 (365)
T 4h5i_A          136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFS-----------------------------  185 (365)
T ss_dssp             EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEEC-----------------------------
T ss_pred             EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEc-----------------------------
Confidence            88999999983 43  45579999999999998888775 66678888776                             


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC----cEEEEeCCCCeE
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK----SIKLWDGRIGKF  494 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg----~i~lwd~~~~~~  494 (573)
                              |+|.++++++.++.+.+|.............+|...|.+++|+|+++++++++.|+    .+++||......
T Consensus       186 --------pdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~  257 (365)
T 4h5i_A          186 --------TDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT  257 (365)
T ss_dssp             --------TTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred             --------cCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence                    55889999987665555554433333344567888999999999999999999887    688899876643


Q ss_pred             ----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc-ccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         495 ----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD-LPGHGDEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       495 ----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~-l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                          ...+.+|...|++++|||||++||+|+.|++|+|||+++++++.. +.+|.+.|++++|||||++|||||.|++||
T Consensus       258 ~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvr  337 (365)
T 4h5i_A          258 SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIH  337 (365)
T ss_dssp             EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEE
T ss_pred             cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEE
Confidence                346778999999999999999999999999999999999998876 689999999999999999999999999999


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      ||+
T Consensus       338 vw~  340 (365)
T 4h5i_A          338 IIK  340 (365)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            997

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=4.4e-39  Score=318.73  Aligned_cols=290  Identities=15%  Similarity=0.134  Sum_probs=212.1

Q ss_pred             ccEEEEEEcCCCCeeEEeeCCC-------cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         111 EAVISVKFSPNGRSLASGSGDT-------TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       111 ~~V~~l~~s~~~~~lat~s~D~-------~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      -||.|++|+|||++||+||+|.       +|+||++..+......                              ...  
T Consensus        15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~------------------------------~~~--   62 (365)
T 4h5i_A           15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE------------------------------QFH--   62 (365)
T ss_dssp             SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH------------------------------HEE--
T ss_pred             CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee------------------------------eee--
Confidence            3799999999999999998754       5999998765321000                              000  


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEE-----------eCCCeEEEEECCCCeee----EE----
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG-----------SGDTTVRFWDVTTQTPL----FK----  244 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~-----------s~d~~i~iwd~~~~~~~----~~----  244 (573)
                                   ......+.+|.+.|.++++++  +.+++|           +.|+++|+|++.+....    ..    
T Consensus        63 -------------~~~~~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~  127 (365)
T 4h5i_A           63 -------------ILSEFALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFD  127 (365)
T ss_dssp             -------------EEEEEECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSS
T ss_pred             -------------eeeEEEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeecee
Confidence                         000123668888888887654  455555           45788999987654221    11    


Q ss_pred             -ecCCCCcEEEEEEcCCCCeEEEE--eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         245 -CEGHKHWVLCIAWSPDSKQLVSG--CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       245 -~~~h~~~V~~v~~s~dg~~l~sg--s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                       ...+...+.+++|||||++|+++  +.|++|++||+++++.                                      
T Consensus       128 ~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~--------------------------------------  169 (365)
T 4h5i_A          128 ASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE--------------------------------------  169 (365)
T ss_dssp             CCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--------------------------------------
T ss_pred             ecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--------------------------------------
Confidence             12345568889999999887644  3567777777665432                                      


Q ss_pred             EEEECCCCeEEEEecCCCccEEEEEECCCcE-EEEEeCCCeEEEEeCCCCeee--EeccCCcceeeEEEeccCceeEEEE
Q psy2671         322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSASQDRTIKVWRASDGVMC--RTLEGHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       322 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~  398 (573)
                                +..+. |...|.+++|++++. +++++ ++.+++|+..++...  ....+|...+..++++         
T Consensus       170 ----------~~~~~-~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs---------  228 (365)
T 4h5i_A          170 ----------KFEIE-TRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFI---------  228 (365)
T ss_dssp             ----------EEEEE-CSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEE---------
T ss_pred             ----------EEEeC-CCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEc---------
Confidence                      22222 556688889988874 55555 556667766666544  3456788888888776         


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC----eEEEEcCCCCccc---eeeeccccccEEEEEECCC
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF----TLFLWNPEKEKKS---LARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg----~i~lwd~~~~~~~---~~~~~~h~~~v~~v~~sp~  471 (573)
                                                  |++..+++++.|+    .+++|+.......   ...+.+|...|++++|+||
T Consensus       229 ----------------------------pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd  280 (365)
T 4h5i_A          229 ----------------------------ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK  280 (365)
T ss_dssp             ----------------------------ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred             ----------------------------CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence                                        4477888888776    6888987654332   3456789999999999999


Q ss_pred             CCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         472 GRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       472 g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      |++||+|+.|++|+|||+++++.+.. +.+|...|++++|||||++|||||.|++||||++...
T Consensus       281 g~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          281 GELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             SCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             CCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            99999999999999999999999887 4799999999999999999999999999999999643

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.5e-39  Score=324.44  Aligned_cols=319  Identities=12%  Similarity=0.185  Sum_probs=229.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      |.++|++++|+|++++||+|+.|++|+|||+.++..                                            
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~--------------------------------------------   45 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW--------------------------------------------   45 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE--------------------------------------------
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce--------------------------------------------
Confidence            678999999999999999999999999999876521                                            


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                               ++...+.+|.+.|.+++|+|++++|++++.|++|++||+.++.   +...+.+|...|.+++|+|++++|+
T Consensus        46 ---------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  116 (377)
T 3dwl_C           46 ---------KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFA  116 (377)
T ss_dssp             ---------EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCE
T ss_pred             ---------EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEE
Confidence                     1124567899999999999999999999999999999999876   6777889999999999999999999


Q ss_pred             EEeeCCeEEEEECCCCce--ecccccC-CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC---------------
Q psy2671         266 SGCKNGVIHAWDSSTGKQ--IGQPMRG-HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI---------------  327 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~---------------  327 (573)
                      +|+.|+.|++||+++++.  ....+.+ |...|.+++|.|     +++++++++.|+.|++||+.               
T Consensus       117 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~  191 (377)
T 3dwl_C          117 VGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP-----NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGS  191 (377)
T ss_dssp             EEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT-----TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCS
T ss_pred             EEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC-----CCCEEEEEeCCCEEEEEEEEecccCCCcccccccc
Confidence            999999999999988763  2234455 999999999987     56799999999999999984               


Q ss_pred             ---CCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCee----eEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         328 ---LSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVM----CRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       328 ---~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                         .++++..+ +|...|.+++|++++ .+++++.|++|++||+.++..    ...+.+|...|.++++++         
T Consensus       192 ~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~---------  261 (377)
T 3dwl_C          192 RLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN---------  261 (377)
T ss_dssp             CCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE---------
T ss_pred             ccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC---------
Confidence               34556666 899999999999887 699999999999999998877    778889998888888774         


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-cceeeecccc---------------ccE
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQ---------------QLI  463 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~---------------~~v  463 (573)
                                                  ++.+|++|+.++.+ +|+..... .....+....               ...
T Consensus       262 ----------------------------~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (377)
T 3dwl_C          262 ----------------------------ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEE  312 (377)
T ss_dssp             ----------------------------TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-
T ss_pred             ----------------------------CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccc
Confidence                                        46788888877777 55544222 1111111100               113


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-C---EEEEEeCCCcEEEEeC
Q psy2671         464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-R---LLVSGSADSTLKVWNM  531 (573)
Q Consensus       464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-~---~las~s~D~~v~vwd~  531 (573)
                      ..+.|++....+......|...       ........|...|+++++.+.. .   .|+|||.||.|++||+
T Consensus       313 ~~~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          313 GPVSFTALRSTFRNMDLKGSSQ-------SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -------------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             cccccccccccccchhhccccc-------cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            3334443322222221111111       1122334699999999976543 3   6999999999999985

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=6e-38  Score=315.49  Aligned_cols=294  Identities=24%  Similarity=0.414  Sum_probs=238.8

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      ..++|.+.+.+.++++++..+++++.|++|+|||+.+++.....                                    
T Consensus        86 ~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~------------------------------------  129 (401)
T 4aez_A           86 DAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALA------------------------------------  129 (401)
T ss_dssp             ECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEE------------------------------------
T ss_pred             eCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEee------------------------------------
Confidence            34577776544444444577899999999999999887643211                                    


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                        ...|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|...|.+++|  ++.+|
T Consensus       130 ------------------~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l  189 (401)
T 4aez_A          130 ------------------ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVL  189 (401)
T ss_dssp             ------------------ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEE
T ss_pred             ------------------ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEE
Confidence                              1137889999999999999999999999999999999999999999999999999  46799


Q ss_pred             EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  344 (573)
                      ++|+.||.|++||++........+.+|...|.++.|.|     +++.+++++.||.|++||+..+++...+..|...|.+
T Consensus       190 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~  264 (401)
T 4aez_A          190 SSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRS-----DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKA  264 (401)
T ss_dssp             EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCE
T ss_pred             EEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcC-----CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEE
Confidence            99999999999999865555566788999999999987     5679999999999999999999999999999999999


Q ss_pred             EEECCCc--EEEEEe--CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         345 IRWGGSG--LIYSAS--QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       345 ~~~~~~~--~l~s~s--~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      ++|++++  .+++++  .|+.|++||+.++.....                                             
T Consensus       265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~---------------------------------------------  299 (401)
T 4aez_A          265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT---------------------------------------------  299 (401)
T ss_dssp             EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE---------------------------------------------
T ss_pred             EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE---------------------------------------------
Confidence            9998754  555554  688888887765432211                                             


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE--eeCCCcEEEEeCCCCeEEE--
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS--ASFDKSIKLWDGRIGKFIT--  496 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las--~s~dg~i~lwd~~~~~~~~--  496 (573)
                                                         + .+...|.+++|+|+++++++  |+.||.|++||..+++...  
T Consensus       300 -----------------------------------~-~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~  343 (401)
T 4aez_A          300 -----------------------------------V-DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV  343 (401)
T ss_dssp             -----------------------------------E-ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred             -----------------------------------E-eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence                                               1 13456899999999999999  5589999999999875544  


Q ss_pred             eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671         497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       497 ~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l  540 (573)
                      .+.+|...|.+++|+|+|++|++++.|+.|++|++.+++.+...
T Consensus       344 ~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~  387 (401)
T 4aez_A          344 DIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP  387 (401)
T ss_dssp             EEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred             EecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence            46799999999999999999999999999999999988776543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.1e-39  Score=311.06  Aligned_cols=259  Identities=24%  Similarity=0.374  Sum_probs=190.7

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|.++|++++|+|+|++||||+.|++|||||+.++...                                       
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~---------------------------------------   48 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI---------------------------------------   48 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE---------------------------------------
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE---------------------------------------
Confidence            46689999999999999999999999999999998765321                                       


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~d  260 (573)
                                    +...+.||.+.|.+++|+|  ++++|++|+.|++|++||+.++  .....+.+|...|.+++|+|+
T Consensus        49 --------------~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~  114 (316)
T 3bg1_A           49 --------------LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH  114 (316)
T ss_dssp             --------------EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred             --------------EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence                          0123558999999999986  4899999999999999999886  356678899999999999998


Q ss_pred             --CCeEEEEeeCCeEEEEECCCCce--ecccccCCcccEEEEEecccccC------------CCCCEEEEEeCCCcEEEE
Q psy2671         261 --SKQLVSGCKNGVIHAWDSSTGKQ--IGQPMRGHKQWITALSWEPFHLN------------HQCRRFASSGKDGAIRIW  324 (573)
Q Consensus       261 --g~~l~sgs~dg~i~vwd~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~------------~~~~~l~s~~~dg~v~iw  324 (573)
                        +.+|++|+.|++|++||+..+..  ....+.+|...|.++.|.|....            ..+++|++++.|++|++|
T Consensus       115 ~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lW  194 (316)
T 3bg1_A          115 DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLW  194 (316)
T ss_dssp             TTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEE
T ss_pred             CCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEE
Confidence              78999999999999999987632  23456789999999999885211            113567788888888888


Q ss_pred             ECCCC---eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         325 DVILS---QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       325 d~~~~---~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      |+...   ++...+.+|...|.+++|++++.                                                 
T Consensus       195 d~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~-------------------------------------------------  225 (316)
T 3bg1_A          195 KEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG-------------------------------------------------  225 (316)
T ss_dssp             EECTTSCEEEEECCBCCSSCEEEEECCCCSS-------------------------------------------------
T ss_pred             EeCCCCccceeeecccCCCceEEEEecCCCC-------------------------------------------------
Confidence            77543   34555666777777777765420                                                 


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCC---ccceeeeccccccEEEEEECCCCCEEEEe
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE---KKSLARMTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~---~~~~~~~~~h~~~v~~v~~sp~g~~las~  478 (573)
                                               .++.+|++|+.|++|++|+++..   ......+.+|...|.+++|+|+|++||++
T Consensus       226 -------------------------~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~  280 (316)
T 3bg1_A          226 -------------------------LPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVS  280 (316)
T ss_dssp             -------------------------CSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE
T ss_pred             -------------------------CCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE
Confidence                                     01133444444444444444321   11112334577889999999999999999


Q ss_pred             eCCCcEEEEeCC
Q psy2671         479 SFDKSIKLWDGR  490 (573)
Q Consensus       479 s~dg~i~lwd~~  490 (573)
                      +.||+|++|+..
T Consensus       281 ~~D~~v~lw~~~  292 (316)
T 3bg1_A          281 GGDNKVTLWKES  292 (316)
T ss_dssp             ESSSCEEEEEEC
T ss_pred             cCCCeEEEEEEC
Confidence            999999999965

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-39  Score=325.55  Aligned_cols=299  Identities=15%  Similarity=0.233  Sum_probs=231.4

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc-
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK-  282 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~-  282 (573)
                      |.++|.+++|+|++++||+|+.|+.|+|||+.++  +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++. 
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~   89 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT   89 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence            5678999999999999999999999999999988  6778889999999999999999999999999999999998876 


Q ss_pred             -eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---EEEEecC-CCccEEEEEECCCc-EEEEE
Q psy2671         283 -QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---CVRVLTS-HTRSVTCIRWGGSG-LIYSA  356 (573)
Q Consensus       283 -~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~-h~~~v~~~~~~~~~-~l~s~  356 (573)
                       .....+.+|...|.+++|.|     ++++|++++.|+.|++||+..++   ....+.. |...|.+++|++++ .++++
T Consensus        90 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~  164 (377)
T 3dwl_C           90 WKQTLVLLRLNRAATFVRWSP-----NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG  164 (377)
T ss_dssp             CCCEEECCCCSSCEEEEECCT-----TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred             eeeeeEecccCCceEEEEECC-----CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence             11234668999999999987     56789999999999999998876   3666777 99999999999886 79999


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      +.|++|++||+..+........                                               .+.+..+    
T Consensus       165 ~~d~~i~iwd~~~~~~~~~~~~-----------------------------------------------~~~~~~~----  193 (377)
T 3dwl_C          165 CADRKAYVLSAYVRDVDAKPEA-----------------------------------------------SVWGSRL----  193 (377)
T ss_dssp             ESSSCEEEEEECCSSCC-CCCS-----------------------------------------------CSSCSCC----
T ss_pred             eCCCEEEEEEEEecccCCCccc-----------------------------------------------ccccccc----
Confidence            9999999999865432110000                                               0000000    


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE----EEeecCCcceEEEEEECC
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF----ITTLRGHVQAVYMVAWSS  512 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~----~~~~~~h~~~v~~v~~s~  512 (573)
                                 ........+ +|...|.+++|+|+|++|++++.||.|++||.++++.    +..+.+|...|.+++|+|
T Consensus       194 -----------~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~  261 (377)
T 3dwl_C          194 -----------PFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN  261 (377)
T ss_dssp             -----------CEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE
T ss_pred             -----------chhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC
Confidence                       001223334 7889999999999999999999999999999999877    788899999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCccc--ccc--------------------------------------------------cc
Q psy2671         513 DSRLLVSGSADSTLKVWNMKTKK--IEQ--------------------------------------------------DL  540 (573)
Q Consensus       513 dg~~las~s~D~~v~vwd~~~~~--~~~--------------------------------------------------~l  540 (573)
                      ++++|++++.|+.+ +|+.....  ...                                                  ..
T Consensus       262 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  340 (377)
T 3dwl_C          262 ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLP  340 (377)
T ss_dssp             TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCS
T ss_pred             CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccC
Confidence            99999999876665 66654211  000                                                  01


Q ss_pred             cCcCCCEEEEEEccCCC----EEEEeeCCCcEEEccC
Q psy2671         541 PGHGDEVYAVDWAPDGE----KVASGGKDKVLRLWQN  573 (573)
Q Consensus       541 ~~h~~~v~~~~~s~d~~----~l~s~~~d~~i~iw~~  573 (573)
                      ..|.+.|+++.+.++..    .|+|||.||.|++|+.
T Consensus       341 ~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          341 TVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             SSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence            23999999999776543    5999999999999973

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.7e-38  Score=313.58  Aligned_cols=311  Identities=19%  Similarity=0.334  Sum_probs=250.9

Q ss_pred             CCCCCCcEEEEEEcCC----CCeEEEEeCCCeEEEEECCCCeeeEEec-----CCCCcEEEEEEcCC----CCeEEEEee
Q psy2671         203 MPGHAEAVISVKFSPN----GRSLASGSGDTTVRFWDVTTQTPLFKCE-----GHKHWVLCIAWSPD----SKQLVSGCK  269 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~----g~~las~s~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~v~~s~d----g~~l~sgs~  269 (573)
                      ..+|.++|++++|+|+    ...+++++.++.|++||+.++..+..+.     .|...|.+++|+|+    +++|++|+.
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~   93 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS   93 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence            3589999999999994    4566777777799999999876655544     36678999999999    679999999


Q ss_pred             CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe---cCCCccEEEEE
Q psy2671         270 NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL---TSHTRSVTCIR  346 (573)
Q Consensus       270 dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~---~~h~~~v~~~~  346 (573)
                      ||.|++||+.+++.+. .+.+|...|.++.|.|.    +++.+++++.||.|++||+..++....+   ..|...|.+++
T Consensus        94 dg~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  168 (366)
T 3k26_A           94 RGIIRIINPITMQCIK-HYVGHGNAINELKFHPR----DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD  168 (366)
T ss_dssp             TCEEEEECTTTCCEEE-EEESCCSCEEEEEECSS----CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred             CCEEEEEEchhceEee-eecCCCCcEEEEEECCC----CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence            9999999999887653 46789999999999872    4678999999999999999999988887   78999999999


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      |++++ .+++++.|+.|++||++++.....+..+.                                           ..
T Consensus       169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------------------------~~  205 (366)
T 3k26_A          169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY-------------------------------------------DY  205 (366)
T ss_dssp             ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHH-------------------------------------------TC
T ss_pred             ECCCCCEEEEecCCCCEEEEECCCCccccccceeE-------------------------------------------Ee
Confidence            99876 79999999999999998764432222100                                           00


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe------------
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK------------  493 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~------------  493 (573)
                      .|++..++...    ...+     ........+|...|.+++|+  +++|++++.||.|++||.++++            
T Consensus       206 ~~~~~~~~~~~----~~~~-----~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~  274 (366)
T 3k26_A          206 NPNKTNRPFIS----QKIH-----FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN  274 (366)
T ss_dssp             CGGGCSSCCCC----EEEC-----CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred             cCCCCcccccc----eeec-----cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence            11111111110    0011     11233455688999999999  7799999999999999988764            


Q ss_pred             --EEEeecCCcceEEEEEECCC--CCEEEEEeCCCcEEEEeCCcccccc----cccCc--CCCEEEEEEccCCCEEEEee
Q psy2671         494 --FITTLRGHVQAVYMVAWSSD--SRLLVSGSADSTLKVWNMKTKKIEQ----DLPGH--GDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       494 --~~~~~~~h~~~v~~v~~s~d--g~~las~s~D~~v~vwd~~~~~~~~----~l~~h--~~~v~~~~~s~d~~~l~s~~  563 (573)
                        .+..+.+|...|++++|+|+  +++|++++.|+.|++||+.+++...    .+.+|  ...|++++|+|++++|++++
T Consensus       275 ~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~  354 (366)
T 3k26_A          275 VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC  354 (366)
T ss_dssp             EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred             hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence              37788889999999999999  9999999999999999999876544    67777  78999999999999999999


Q ss_pred             CCCcEEEcc
Q psy2671         564 KDKVLRLWQ  572 (573)
Q Consensus       564 ~d~~i~iw~  572 (573)
                      .||.|++|+
T Consensus       355 ~dg~i~iwd  363 (366)
T 3k26_A          355 DDASIWRWD  363 (366)
T ss_dssp             TTSEEEEEE
T ss_pred             CCCEEEEEE
Confidence            999999997

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.1e-38  Score=322.95  Aligned_cols=298  Identities=20%  Similarity=0.225  Sum_probs=248.9

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ..+++++|+|+|++|++++.|+.|++||+.+++....+..| ..+....|+|++++|++|+.||.|++||+.+++.. ..
T Consensus        57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~  134 (420)
T 3vl1_A           57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR-EI  134 (420)
T ss_dssp             BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE-EE
T ss_pred             ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee-ee
Confidence            34557899999999999999999999999887766666666 44556678999999999999999999999887654 45


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEe
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWR  366 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~  366 (573)
                      +.+|...|.+++|.|     ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|++++ .+++++.|++|++||
T Consensus       135 ~~~h~~~v~~~~~~~-----~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd  209 (420)
T 3vl1_A          135 DQAHVSEITKLKFFP-----SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWE  209 (420)
T ss_dssp             TTSSSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             cccccCccEEEEECC-----CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeE
Confidence            679999999999987     56799999999999999999999999999999999999999876 799999999999999


Q ss_pred             CCCCeeeEeccCC---cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEE
Q psy2671         367 ASDGVMCRTLEGH---AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFL  443 (573)
Q Consensus       367 ~~~~~~~~~~~~~---~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~l  443 (573)
                      ++++.....+..|   ...+..+++.+..                                             +.    
T Consensus       210 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------------------------------~~----  240 (420)
T 3vl1_A          210 CGTGTTIHTFNRKENPHDGVNSIALFVGT---------------------------------------------DR----  240 (420)
T ss_dssp             TTTTEEEEEECBTTBTTCCEEEEEEEECC---------------------------------------------CS----
T ss_pred             CCCCceeEEeecCCCCCCCccEEEEecCC---------------------------------------------cc----
Confidence            9999888777653   3344444332210                                             00    


Q ss_pred             EcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec-CCcceEEEEEECCCCC-EEEEEe
Q psy2671         444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSDSR-LLVSGS  521 (573)
Q Consensus       444 wd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~-~h~~~v~~v~~s~dg~-~las~s  521 (573)
                                .....+...+.+++|+|++++|++|+.||.|++||.++++.+..+. +|...|++++|+|+++ +|++|+
T Consensus       241 ----------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~  310 (420)
T 3vl1_A          241 ----------QLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY  310 (420)
T ss_dssp             ----------SCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE
T ss_pred             ----------eeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe
Confidence                      0112345668889999999999999999999999999988777664 5888999999999999 999999


Q ss_pred             CCCcEEEEeCCcccc-cccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         522 ADSTLKVWNMKTKKI-EQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       522 ~D~~v~vwd~~~~~~-~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|+.|++||+++++. +..+.+ |...|.++. ++++++|++++.|+.|++|+
T Consensus       311 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~  362 (420)
T 3vl1_A          311 ENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDI  362 (420)
T ss_dssp             TTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEE
T ss_pred             CCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEe
Confidence            999999999998754 566666 667788885 55788999999999999997

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.4e-38  Score=323.48  Aligned_cols=285  Identities=18%  Similarity=0.293  Sum_probs=225.0

Q ss_pred             CCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECC
Q psy2671         204 PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       204 ~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~  279 (573)
                      .+|...|+|++|+| ++.+||+|+.||+|+|||+.++..  ...+.+|.+.|++|+|+| ++.+|++|+.||+|++||++
T Consensus       116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~  195 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK  195 (435)
T ss_dssp             EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred             CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence            46889999999999 567899999999999999987653  445678999999999998 78899999999999999998


Q ss_pred             CCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEE
Q psy2671         280 TGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSA  356 (573)
Q Consensus       280 ~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~  356 (573)
                      ++.... .....+..++.++.|.|     +++++++|+.||.|++||+. ++.+..+.+|...|.+++|++++  .++++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~  269 (435)
T 4e54_B          196 GNILRVFASSDTINIWFCSLDVSA-----SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATA  269 (435)
T ss_dssp             SCEEEEEECCSSCSCCCCCEEEET-----TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred             CCceeEEeccCCCCccEEEEEECC-----CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEe
Confidence            654321 11223345667777765     67899999999999999985 45667788999999999998654  56777


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      +.|++|++||++++...                                                               
T Consensus       270 s~d~~v~iwd~~~~~~~---------------------------------------------------------------  286 (435)
T 4e54_B          270 SVDQTVKIWDLRQVRGK---------------------------------------------------------------  286 (435)
T ss_dssp             ETTSBCCEEETTTCCSS---------------------------------------------------------------
T ss_pred             cCcceeeEEeccccccc---------------------------------------------------------------
Confidence            78888888876543210                                                               


Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcc------eEEEEEE
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ------AVYMVAW  510 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~------~v~~v~~  510 (573)
                                    ..+....+|...|++++|+|+|++|++++.||.|++||.++++....+..|..      .+..+.|
T Consensus       287 --------------~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  352 (435)
T 4e54_B          287 --------------ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAW  352 (435)
T ss_dssp             --------------SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEE
T ss_pred             --------------ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEE
Confidence                          11122346888999999999999999999999999999999887777766542      2334567


Q ss_pred             CCCCCEEEEEe------------CCCcEEEEeCCcccccccc-cCcCCCEEEE-EEccCCCEEEEeeCCCcEEEcc
Q psy2671         511 SSDSRLLVSGS------------ADSTLKVWNMKTKKIEQDL-PGHGDEVYAV-DWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       511 s~dg~~las~s------------~D~~v~vwd~~~~~~~~~l-~~h~~~v~~~-~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|++.++++++            .++.|++||..+++.+..+ .+|...|.++ +|+|+|++|++|+ |++|+||+
T Consensus       353 ~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~  427 (435)
T 4e54_B          353 HPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS  427 (435)
T ss_dssp             CSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred             cCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence            77777766654            2357999999999887765 4688888887 6999999999876 88999997

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.5e-38  Score=307.44  Aligned_cols=250  Identities=27%  Similarity=0.530  Sum_probs=201.6

Q ss_pred             ccCCCCCCC-cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE---EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         200 TSSMPGHAE-AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF---KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       200 ~~~~~gh~~-~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~---~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                      ..++.+|.+ .|++++|+|+|++||+|+.|++|+|||+.++....   ...+|...|.+++|+|+|++|++|+.|+++++
T Consensus         8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i   87 (345)
T 3fm0_A            8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI   87 (345)
T ss_dssp             EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred             eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence            345778988 99999999999999999999999999998875432   24689999999999999999999999999999


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEE
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIY  354 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~  354 (573)
                      |+...+..                                              +++..+.+|...|.+++|++++ .++
T Consensus        88 w~~~~~~~----------------------------------------------~~~~~~~~h~~~v~~v~~sp~~~~l~  121 (345)
T 3fm0_A           88 WKKNQDDF----------------------------------------------ECVTTLEGHENEVKSVAWAPSGNLLA  121 (345)
T ss_dssp             EEECCC-E----------------------------------------------EEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred             EEccCCCe----------------------------------------------EEEEEccCCCCCceEEEEeCCCCEEE
Confidence            98754321                                              1123455677777777777655 566


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +|+.|++|++||+.++..                                                              
T Consensus       122 s~s~D~~v~iwd~~~~~~--------------------------------------------------------------  139 (345)
T 3fm0_A          122 TCSRDKSVWVWEVDEEDE--------------------------------------------------------------  139 (345)
T ss_dssp             EEETTSCEEEEEECTTSC--------------------------------------------------------------
T ss_pred             EEECCCeEEEEECCCCCC--------------------------------------------------------------
Confidence            677777777776543210                                                              


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--EEEeecCCcceEEEEEECC
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--FITTLRGHVQAVYMVAWSS  512 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~--~~~~~~~h~~~v~~v~~s~  512 (573)
                                     ......+.+|...|.+++|+|++++|++|+.|++|++||.+.++  ...++.+|...|++++|+|
T Consensus       140 ---------------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp  204 (345)
T 3fm0_A          140 ---------------YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP  204 (345)
T ss_dssp             ---------------EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT
T ss_pred             ---------------eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC
Confidence                           01123345678889999999999999999999999999988775  4578899999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCcc---------------cccccccC-cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         513 DSRLLVSGSADSTLKVWNMKTK---------------KIEQDLPG-HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       513 dg~~las~s~D~~v~vwd~~~~---------------~~~~~l~~-h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|++||+++.|++|++|+....               +++..+.+ |...|++++|+|++..|++++.|+.|++|+
T Consensus       205 ~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~  280 (345)
T 3fm0_A          205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ  280 (345)
T ss_dssp             TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred             CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence            9999999999999999996332               12233444 888999999999999999999999999995

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.5e-37  Score=297.17  Aligned_cols=283  Identities=24%  Similarity=0.408  Sum_probs=223.9

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      ..+|+||+++ +||+| .|++|||||+++++++..+                                            
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~--------------------------------------------   61 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLL--------------------------------------------   61 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEE--------------------------------------------
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEE--------------------------------------------
Confidence            4678999875 67665 5999999999988754221                                            


Q ss_pred             EeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         193 VRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                               .+.+|...|++++|+|++++||+|+.|++|++||+.+++.+..+.+|...+.++++  ++..+++|+.++.
T Consensus        62 ---------~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~  130 (318)
T 4ggc_A           62 ---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGH  130 (318)
T ss_dssp             ---------ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred             ---------EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCc
Confidence                     23478899999999999999999999999999999999999999999998887665  5678999999999


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE----EEEecCCCccEEEEEEC
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC----VRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~~~~~  348 (573)
                      +++|+...+......+.+|...+..+.+.+     .++++++++.||+|++||+.+++.    ......|...|.++.+.
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~  205 (318)
T 4ggc_A          131 IHHHDVRVAEHHVATLSGHSQEVCGLRWAP-----DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWC  205 (318)
T ss_dssp             EEEEETTSSSCEEEEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEEC
T ss_pred             eEeeecCCCceeEEEEcCccCceEEEEEcC-----CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEec
Confidence            999999887766667788999999988765     567899999999999999976542    23334455566666654


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      +.+.                                                                           .
T Consensus       206 ~~~~---------------------------------------------------------------------------~  210 (318)
T 4ggc_A          206 PWQS---------------------------------------------------------------------------N  210 (318)
T ss_dssp             TTST---------------------------------------------------------------------------T
T ss_pred             CCCC---------------------------------------------------------------------------c
Confidence            4320                                                                           0


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee--CCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS--FDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s--~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                      .-.+++++.+++|++||......  .....+...+..+.|+|++..+++++  .|+.|++||.++++.+.++.+|...|+
T Consensus       211 ~~~~~~~~~~~~i~lwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~  288 (318)
T 4ggc_A          211 VLATGGGTSDRHIRIWNVCSGAC--LSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL  288 (318)
T ss_dssp             EEEEEECTTTCEEEEEETTTCCE--EEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred             EEEEEecCCCCEEEEEecccccc--cccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence            01123344555555555544322  12233456688999999999887654  799999999999999999999999999


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      +++|+|||++|||||.|++|+|||+...
T Consensus       289 ~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          289 SLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             EEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             EEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            9999999999999999999999998653

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=6.4e-37  Score=309.87  Aligned_cols=276  Identities=27%  Similarity=0.530  Sum_probs=229.6

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe--cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ...|+||+++ .||+| .|++|+|||..+++....+  .+|...|+||+|+|||++|++|+.||+|++||+++++.+ ..
T Consensus       108 ~~~l~wS~~n-~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~-~~  184 (420)
T 4gga_A          108 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL-RN  184 (420)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EE
T ss_pred             ceeEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE-EE
Confidence            4578999864 67766 4999999999999876544  578889999999999999999999999999999998876 45


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW  365 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw  365 (573)
                      +.+|...+.++.|.+       ..+++++.|+.+++||.... ..+..+.+|...+.++.+.+++ .+++++.|+.+++|
T Consensus       185 ~~~h~~~v~~~s~~~-------~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~  257 (420)
T 4gga_A          185 MTSHSARVGSLSWNS-------YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW  257 (420)
T ss_dssp             ECCCSSCEEEEEEET-------TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             EeCCCCceEEEeeCC-------CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEE
Confidence            678999999988754       57999999999999998764 4556778888888888887665 57777777777777


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      +..++...                                                                        
T Consensus       258 ~~~~~~~~------------------------------------------------------------------------  265 (420)
T 4gga_A          258 PSAPGEGG------------------------------------------------------------------------  265 (420)
T ss_dssp             ESSCCSSC------------------------------------------------------------------------
T ss_pred             eecccccc------------------------------------------------------------------------
Confidence            76543210                                                                        


Q ss_pred             CCCCccceeeeccccccEEEEEECCCC-CEEEE--eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe-
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDG-RIIAS--ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS-  521 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las--~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s-  521 (573)
                          ...+.....|...|.+++|+|++ .++++  |+.|++|++||+.+++.+..+..| ..+.++.|+|+++.+++++ 
T Consensus       266 ----~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg  340 (420)
T 4gga_A          266 ----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHG  340 (420)
T ss_dssp             ----SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEEC
T ss_pred             ----ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEe
Confidence                01223445677889999999965 45554  468999999999999999888766 4688899999999988765 


Q ss_pred             -CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         522 -ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       522 -~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                       .|+.|+|||+.+++.+..+.+|.+.|++++|+|||++|+|||.|++|++|+
T Consensus       341 ~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd  392 (420)
T 4gga_A          341 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR  392 (420)
T ss_dssp             TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred             cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence             799999999999999999999999999999999999999999999999997

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.3e-38  Score=307.50  Aligned_cols=248  Identities=23%  Similarity=0.353  Sum_probs=192.1

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEEEE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~vwd  277 (573)
                      .+.||.+.|++++|+|+|++||+|+.|++|+|||+.++.  .+..+.+|...|.+++|+|  ++++|++|+.|++|++||
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd   87 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR   87 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence            456999999999999999999999999999999998764  4667899999999999986  488999999999999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--c-EEE
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--G-LIY  354 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~  354 (573)
                      ++++...                                              ....+.+|...|.+++|+++  + .++
T Consensus        88 ~~~~~~~----------------------------------------------~~~~~~~h~~~V~~v~~~p~~~g~~la  121 (316)
T 3bg1_A           88 EENGTWE----------------------------------------------KSHEHAGHDSSVNSVCWAPHDYGLILA  121 (316)
T ss_dssp             CSSSCCC----------------------------------------------EEEEECCCSSCCCEEEECCTTTCSCEE
T ss_pred             CCCCcce----------------------------------------------EEEEccCCCCceEEEEECCCCCCcEEE
Confidence            8654210                                              11223456667777777654  2 566


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +|+.|++|++|+++.+...                                                             
T Consensus       122 sgs~D~~i~lwd~~~~~~~-------------------------------------------------------------  140 (316)
T 3bg1_A          122 CGSSDGAISLLTYTGEGQW-------------------------------------------------------------  140 (316)
T ss_dssp             EECSSSCEEEEEECSSSCE-------------------------------------------------------------
T ss_pred             EEcCCCCEEEEecCCCCCc-------------------------------------------------------------
Confidence            6777777777765432100                                                             


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-----------------CCEEEEeeCCCcEEEEeCCCC---eE
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-----------------GRIIASASFDKSIKLWDGRIG---KF  494 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-----------------g~~las~s~dg~i~lwd~~~~---~~  494 (573)
                                      .....+.+|...|.+++|+|+                 +++|++|+.|++|++||.+..   +.
T Consensus       141 ----------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~  204 (316)
T 3bg1_A          141 ----------------EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE  204 (316)
T ss_dssp             ----------------EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE
T ss_pred             ----------------ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccce
Confidence                            001123356666777777776                 478999999999999998755   46


Q ss_pred             EEeecCCcceEEEEEECCCC----CEEEEEeCCCcEEEEeCCccc----ccccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         495 ITTLRGHVQAVYMVAWSSDS----RLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       495 ~~~~~~h~~~v~~v~~s~dg----~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      +..+.+|...|.+++|+|++    ++||+++.|++|++|++.+..    ....+.+|.+.|++++|+|++++|++++.|+
T Consensus       205 ~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~  284 (316)
T 3bg1_A          205 EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDN  284 (316)
T ss_dssp             EECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSS
T ss_pred             eeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCC
Confidence            77899999999999999987    899999999999999997631    2234567899999999999999999999999


Q ss_pred             cEEEcc
Q psy2671         567 VLRLWQ  572 (573)
Q Consensus       567 ~i~iw~  572 (573)
                      +|++|+
T Consensus       285 ~v~lw~  290 (316)
T 3bg1_A          285 KVTLWK  290 (316)
T ss_dssp             CEEEEE
T ss_pred             eEEEEE
Confidence            999996

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-38  Score=322.19  Aligned_cols=289  Identities=21%  Similarity=0.369  Sum_probs=244.3

Q ss_pred             CCCcEEEEEEcCCCC-eEEEE----------eCCCeEEEEECCCCee--eEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         206 HAEAVISVKFSPNGR-SLASG----------SGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       206 h~~~V~~~~fsp~g~-~las~----------s~d~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                      +...|.+++|+|+|+ +|++|          +.|+.|+|||+.++..  ......|...|.+++|+|++++|++|+.||.
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~   90 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS   90 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence            345678999999987 89999          8999999999988752  2223468889999999999999999999999


Q ss_pred             EEEEECCC---CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe------EEE---EecCCCc
Q psy2671         273 IHAWDSST---GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ------CVR---VLTSHTR  340 (573)
Q Consensus       273 i~vwd~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~------~~~---~~~~h~~  340 (573)
                      |++||+.+   +......+.+|...|.++.|.|.    .++++++++.||.|++||+...+      ...   ....|..
T Consensus        91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  166 (416)
T 2pm9_A           91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAK----QDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD  166 (416)
T ss_dssp             EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSS----STTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred             EEEeecccccccccchhhccCCccceEEEEEcCC----CCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence            99999987   33234567789999999999873    25789999999999999998876      322   2467899


Q ss_pred             cEEEEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         341 SVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       341 ~v~~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      .|.+++|+++  ..+++++.|+.|++||++++.....+..+.                                      
T Consensus       167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--------------------------------------  208 (416)
T 2pm9_A          167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS--------------------------------------  208 (416)
T ss_dssp             CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC--------------------------------------
T ss_pred             CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc--------------------------------------
Confidence            9999999987  378899999999999988765543332210                                      


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEeeCCC---cEEEEeCCCC-e
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASASFDK---SIKLWDGRIG-K  493 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~s~dg---~i~lwd~~~~-~  493 (573)
                                                          ...+|...|.+++|+|++ .++++++.|+   .|++||.+++ +
T Consensus       209 ------------------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~  252 (416)
T 2pm9_A          209 ------------------------------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT  252 (416)
T ss_dssp             ------------------------------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred             ------------------------------------cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence                                                012456779999999997 6999999999   9999999986 6


Q ss_pred             EEEeec-CCcceEEEEEECC-CCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCC-CEEEEeeCCCcEEE
Q psy2671         494 FITTLR-GHVQAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG-EKVASGGKDKVLRL  570 (573)
Q Consensus       494 ~~~~~~-~h~~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~-~~l~s~~~d~~i~i  570 (573)
                      .+..+. +|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.+|...|++++|+|++ ++|++++.|+.|++
T Consensus       253 ~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i  332 (416)
T 2pm9_A          253 PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEV  332 (416)
T ss_dssp             CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred             CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEE
Confidence            677788 8999999999999 99999999999999999999999999999999999999999999 89999999999999


Q ss_pred             cc
Q psy2671         571 WQ  572 (573)
Q Consensus       571 w~  572 (573)
                      |+
T Consensus       333 w~  334 (416)
T 2pm9_A          333 QT  334 (416)
T ss_dssp             EE
T ss_pred             EE
Confidence            97

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.3e-37  Score=305.97  Aligned_cols=275  Identities=16%  Similarity=0.174  Sum_probs=235.7

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEEC
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDS  278 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~  278 (573)
                      ..+|.+.|.+++|+|++++|++++.|+.|++||+.++.   ......+|...|.+++|+|+++ +|++|+.||.|++||+
T Consensus         7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~   86 (342)
T 1yfq_A            7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL   86 (342)
T ss_dssp             SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred             ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence            45899999999999999999999999999999998776   3455568999999999999999 9999999999999999


Q ss_pred             -CCCceecccccC--CcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC---------CeEEEEecCCCccEEEEE
Q psy2671         279 -STGKQIGQPMRG--HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL---------SQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       279 -~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~---------~~~~~~~~~h~~~v~~~~  346 (573)
                       .++..  ..+.+  |...|.++.|.|      ++.+++++.|+.|++||+..         .+++..+. |...|.+++
T Consensus        87 ~~~~~~--~~~~~~~~~~~v~~l~~~~------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~  157 (342)
T 1yfq_A           87 IGSPSF--QALTNNEANLGICRICKYG------DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD  157 (342)
T ss_dssp             SSSSSE--EECBSCCCCSCEEEEEEET------TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred             ccCCce--EeccccCCCCceEEEEeCC------CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence             87765  45667  999999999976      46899999999999999876         55555555 778888888


Q ss_pred             ECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      |++++ +++++.|+.|++|++++ +..                                                     
T Consensus       158 ~~~~~-l~~~~~d~~i~i~d~~~~~~~-----------------------------------------------------  183 (342)
T 1yfq_A          158 TNSSR-LIVGMNNSQVQWFRLPLCEDD-----------------------------------------------------  183 (342)
T ss_dssp             ECSSE-EEEEESTTEEEEEESSCCTTC-----------------------------------------------------
T ss_pred             ecCCc-EEEEeCCCeEEEEECCccccc-----------------------------------------------------
Confidence            88776 77778888888887654 211                                                     


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCC------eEEEee
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIG------KFITTL  498 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~------~~~~~~  498 (573)
                                               ........|...|.+++|+| +++++++++.||.|++||.+..      +....+
T Consensus       184 -------------------------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  238 (342)
T 1yfq_A          184 -------------------------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             -------------------------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             -------------------------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence                                     01112234566799999999 9999999999999999999876      677778


Q ss_pred             cCCcc---------eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc-CCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         499 RGHVQ---------AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH-GDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       499 ~~h~~---------~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h-~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                      .+|..         .|.+++|+|++++|++++.|+.|++||+.+++.+..+.+| .+.|++++  |++++|++++.|++
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT  315 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred             ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence            87755         9999999999999999999999999999999999999998 99999999  99999999999998

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.1e-36  Score=290.23  Aligned_cols=276  Identities=26%  Similarity=0.503  Sum_probs=225.0

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe--cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~--~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ..+|+|||++ .||+| .|++|+|||+.+++.+..+  .+|...|.+++|+|++++|++|+.||+|++||+++++.+ ..
T Consensus        28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~-~~  104 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL-RN  104 (318)
T ss_dssp             CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EE
T ss_pred             ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE-EE
Confidence            4678999987 66665 5999999999999877654  578888999999999999999999999999999999876 34


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCc-EEEEEeCCCeEEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW  365 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw  365 (573)
                      +.+|...+.++.+.       +..+++++.++.+++|+.... ..+..+.+|...+.++.+.+++ .+++++.|++|++|
T Consensus       105 ~~~h~~~~~~~~~~-------~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iw  177 (318)
T 4ggc_A          105 MTSHSARVGSLSWN-------SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVW  177 (318)
T ss_dssp             EECCSSCEEEEEEE-------TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ecCccceEEEeecC-------CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEE
Confidence            67898888877654       357999999999999998765 4556678888888888887665 57777777777777


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      |++++...                                                                        
T Consensus       178 d~~~~~~~------------------------------------------------------------------------  185 (318)
T 4ggc_A          178 PSAPGEGG------------------------------------------------------------------------  185 (318)
T ss_dssp             ESSCBTTB------------------------------------------------------------------------
T ss_pred             ECCCCccc------------------------------------------------------------------------
Confidence            76543211                                                                        


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCE---EEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe-
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRI---IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS-  521 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~---las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s-  521 (573)
                          .........|...|.+++++|++..   +++++.+++|++||.+......... +...+..+.|+|++..+++++ 
T Consensus       186 ----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg  260 (318)
T 4ggc_A          186 ----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHG  260 (318)
T ss_dssp             ----SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEEC
T ss_pred             ----ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEE
Confidence                0112223445667889999987653   3567889999999999887665544 556789999999999887655 


Q ss_pred             -CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         522 -ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       522 -~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                       .|+.|++||+++++.+..+.+|.+.|++++|+||+++|+|||.|++|+||+
T Consensus       261 ~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd  312 (318)
T 4ggc_A          261 FAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR  312 (318)
T ss_dssp             TTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred             cCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence             799999999999999999999999999999999999999999999999997

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4.4e-37  Score=313.89  Aligned_cols=306  Identities=17%  Similarity=0.300  Sum_probs=219.3

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      .|.+.|++++|+|+|++||+|+.||.|+|||+.++........                           .+        
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~---------------------------~~--------   70 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSR---------------------------GE--------   70 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCC---------------------------CC--------
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccc---------------------------cc--------
Confidence            4889999999999999999999999999999987642100000                           00        


Q ss_pred             eeeEEEeeccccccCCCCCC------------CcEEEEEEcCCC--CeEEEEeCCCeEEEEECCCCeee-----------
Q psy2671         188 QAVFQVRPVTRCTSSMPGHA------------EAVISVKFSPNG--RSLASGSGDTTVRFWDVTTQTPL-----------  242 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~------------~~V~~~~fsp~g--~~las~s~d~~i~iwd~~~~~~~-----------  242 (573)
                               .++...+.+|.            +.|.+++|+|++  ..|++++.|++|++||+.++...           
T Consensus        71 ---------~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g  141 (447)
T 3dw8_B           71 ---------YNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDG  141 (447)
T ss_dssp             ---------EEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC----
T ss_pred             ---------eeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccc
Confidence                     00112345677            889999999998  78999999999999998764331           


Q ss_pred             ----------------------------EE-ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc-------
Q psy2671         243 ----------------------------FK-CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ-------  286 (573)
Q Consensus       243 ----------------------------~~-~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~-------  286 (573)
                                                  .. ..+|...|.+++|+|++++|++| .|+.|++||++.+.....       
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~  220 (447)
T 3dw8_B          142 RYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPA  220 (447)
T ss_dssp             ----CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS
T ss_pred             cccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccc
Confidence                                        12 36899999999999999999998 799999999984432222       


Q ss_pred             cccCCcccEEEEEecccccCCCC-CEEEEEeCCCcEEEEECCCCeE----EEEecCCCc------------cEEEEEECC
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQC-RRFASSGKDGAIRIWDVILSQC----VRVLTSHTR------------SVTCIRWGG  349 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~------------~v~~~~~~~  349 (573)
                      .+.+|...|.+++|.|     ++ +.+++++.||.|++||+..++.    ...+..|..            .|.+++|++
T Consensus       221 ~~~~~~~~v~~~~~~p-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  295 (447)
T 3dw8_B          221 NMEELTEVITAAEFHP-----NSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH  295 (447)
T ss_dssp             SGGGCCCCEEEEEECS-----SCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT
T ss_pred             cccccCcceEEEEECC-----CCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC
Confidence            3568999999999987     44 7899999999999999998776    667777765            677777776


Q ss_pred             Cc-EEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         350 SG-LIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       350 ~~-~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      ++ .+++++. +.|++||++. +..+..+.+|...+                                            
T Consensus       296 ~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~--------------------------------------------  330 (447)
T 3dw8_B          296 SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR--------------------------------------------  330 (447)
T ss_dssp             TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT--------------------------------------------
T ss_pred             CCCEEEEeeC-CeEEEEeCCCCccccceeecccccc--------------------------------------------
Confidence            65 4555555 7777777654 43333332221100                                            


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-------
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-------  500 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-------  500 (573)
                                          ....... ....-..+..++|+|++++|++|+.||.|++||..+++.+. +.+       
T Consensus       331 --------------------~~l~~~~-~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~  388 (447)
T 3dw8_B          331 --------------------SKLCSLY-ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP  388 (447)
T ss_dssp             --------------------TTHHHHH-HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred             --------------------ccccccc-cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence                                0000000 00000113358999999999999999999999999887653 222       


Q ss_pred             --------------------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         501 --------------------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       501 --------------------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                                                +...|..++|+|++.+||+++.++ +++|.-
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred             ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence                                      234688899999999999998775 888864

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1e-36  Score=309.95  Aligned_cols=292  Identities=29%  Similarity=0.540  Sum_probs=241.1

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      .+|...|.+++|  +++++++|+.|++|++||+.+++.+..+.+|...|.+++|  ++++|++|+.||.|++||+.+++.
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~  205 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM  205 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence            467788998877  8899999999999999999999999999999999999999  788999999999999999999876


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE---EEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      + ..+.+|...|.++.|.+       ..+++++.||.|++||+..+...   ..+.+|...|.++.+ ....+++|+.|+
T Consensus       206 ~-~~~~~h~~~v~~l~~~~-------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg  276 (435)
T 1p22_A          206 L-NTLIHHCEAVLHLRFNN-------GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDR  276 (435)
T ss_dssp             E-EEECCCCSCEEEEECCT-------TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTS
T ss_pred             E-EEEcCCCCcEEEEEEcC-------CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCC
Confidence            5 45678999999999853       58999999999999999887654   677899999999999 445899999999


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      +|++||++++.....+.+|...+.+++++                                       +.++++|+.||+
T Consensus       277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~---------------------------------------~~~l~~g~~dg~  317 (435)
T 1p22_A          277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR---------------------------------------DRLVVSGSSDNT  317 (435)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEEE---------------------------------------TTEEEEEETTSC
T ss_pred             eEEEEECCcCcEEEEEcCCCCcEEEEEeC---------------------------------------CCEEEEEeCCCe
Confidence            99999999999999999998888776543                                       468999999999


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---------EEEeecCCcceEEEEEEC
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---------FITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---------~~~~~~~h~~~v~~v~~s  511 (573)
                      |++||++++. .+..+.+|...|.+++|  ++++|++|+.||.|++||.++++         .+..+.+|...|++++| 
T Consensus       318 i~iwd~~~~~-~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-  393 (435)
T 1p22_A          318 IRLWDIECGA-CLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF-  393 (435)
T ss_dssp             EEEEETTTCC-EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE-
T ss_pred             EEEEECCCCC-EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe-
Confidence            9999998754 56778899999999999  78899999999999999987665         78889999999999999 


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                       ++.+|++++.||+|++||+.+......... ..+..++.|.
T Consensus       394 -~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~  433 (435)
T 1p22_A          394 -DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRTYTYI  433 (435)
T ss_dssp             -CSSCEEECCSSSEEEEEC-----------------------
T ss_pred             -CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccceeee
Confidence             788999999999999999987665443322 2344455554

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=5.8e-37  Score=308.78  Aligned_cols=304  Identities=19%  Similarity=0.297  Sum_probs=254.3

Q ss_pred             CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCceecccc------------cCCcc
Q psy2671         227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQIGQPM------------RGHKQ  293 (573)
Q Consensus       227 ~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~~~~~~------------~~h~~  293 (573)
                      .++.+++|++..++....+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++.......            .+|..
T Consensus        21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (408)
T 4a11_B           21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRY  100 (408)
T ss_dssp             HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSS
T ss_pred             ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCC
Confidence            355688888887777788899999999999999 99999999999999999999876432211            36999


Q ss_pred             cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc----EEEEEeCCCeEEEEeCCC
Q psy2671         294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG----LIYSASQDRTIKVWRASD  369 (573)
Q Consensus       294 ~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~----~l~s~s~d~~i~vw~~~~  369 (573)
                      .|.+++|.|.    ++.++++++.||.|++||+..++....+. +...+.++.+.+.+    .+++++.|+.|++||+++
T Consensus       101 ~v~~~~~~~~----~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~  175 (408)
T 4a11_B          101 SVETVQWYPH----DTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS  175 (408)
T ss_dssp             CEEEEEECTT----CTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred             cEEEEEEccC----CCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence            9999999873    45689999999999999999998887776 67788999987532    799999999999999999


Q ss_pred             CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC
Q psy2671         370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~  448 (573)
                      +.....+.+|...|.++++++                                     ++. .+++|+.||.|++||++.
T Consensus       176 ~~~~~~~~~~~~~v~~~~~~~-------------------------------------~~~~ll~~~~~dg~i~i~d~~~  218 (408)
T 4a11_B          176 GSCSHILQGHRQEILAVSWSP-------------------------------------RYDYILATASADSRVKLWDVRR  218 (408)
T ss_dssp             SCCCEEECCCCSCEEEEEECS-------------------------------------SCTTEEEEEETTSCEEEEETTC
T ss_pred             cceeeeecCCCCcEEEEEECC-------------------------------------CCCcEEEEEcCCCcEEEEECCC
Confidence            999899999999998888764                                     355 589999999999999987


Q ss_pred             Cccceeee---------------ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----ceEEEE
Q psy2671         449 EKKSLARM---------------TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-----QAVYMV  508 (573)
Q Consensus       449 ~~~~~~~~---------------~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----~~v~~v  508 (573)
                      .......+               .+|...|.+++|+|++++|++++.||.|++||.++++....+.++.     ..+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~  298 (408)
T 4a11_B          219 ASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT  298 (408)
T ss_dssp             SSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred             CCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence            65444333               5788899999999999999999999999999999887655443321     112222


Q ss_pred             EECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       509 ~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .....+..+++++.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++|+
T Consensus       299 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~  362 (408)
T 4a11_B          299 VSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWV  362 (408)
T ss_dssp             ECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             EecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEe
Confidence            2233455677778899999999999999999999999999999999999999999999999997

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.2e-36  Score=309.36  Aligned_cols=280  Identities=26%  Similarity=0.503  Sum_probs=239.6

Q ss_pred             CCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEe
Q psy2671         107 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ  186 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (573)
                      .+|...|.+++|  ++++|++|+.||+|++||+.+++++                                         
T Consensus       130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~-----------------------------------------  166 (435)
T 1p22_A          130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK-----------------------------------------  166 (435)
T ss_dssp             CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE-----------------------------------------
T ss_pred             cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE-----------------------------------------
Confidence            467788999887  7999999999999999999876543                                         


Q ss_pred             ceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671         187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s  266 (573)
                                    ..+.+|.+.|.+++|  ++++|++|+.||+|++||+.+++.+..+.+|...|.+++|++  .+|++
T Consensus       167 --------------~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s  228 (435)
T 1p22_A          167 --------------RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVT  228 (435)
T ss_dssp             --------------EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEE
T ss_pred             --------------EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEE
Confidence                          224589999999998  788999999999999999999999999999999999999974  58999


Q ss_pred             EeeCCeEEEEECCCCceec--ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIG--QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  344 (573)
                      |+.||.|++||+.++....  ..+.+|...|.++.|       +++.+++++.||.|++||+.+++.+..+.+|...|.+
T Consensus       229 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~  301 (435)
T 1p22_A          229 CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC  301 (435)
T ss_dssp             EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred             eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-------CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEE
Confidence            9999999999998876542  456789999999987       3468999999999999999999999999999999999


Q ss_pred             EEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         345 IRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       345 ~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      +.+. +..+++|+.|++|++||++++.....+.+|...|.++++                                    
T Consensus       302 ~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~------------------------------------  344 (435)
T 1p22_A          302 LQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF------------------------------------  344 (435)
T ss_dssp             EEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC------------------------------------
T ss_pred             EEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe------------------------------------
Confidence            9995 458999999999999999999999999999988877764                                    


Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCc--------cceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEK--------KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~--------~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                         ++.++++|+.||.|++||+....        ..+..+.+|...|.+++|  ++++|++|+.||+|++||..+.....
T Consensus       345 ---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~  419 (435)
T 1p22_A          345 ---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ  419 (435)
T ss_dssp             ---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred             ---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence               25689999999999999975432        146678899999999999  67899999999999999998765433

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=3.8e-36  Score=295.48  Aligned_cols=286  Identities=14%  Similarity=0.104  Sum_probs=231.2

Q ss_pred             CCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671         106 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY  185 (573)
Q Consensus       106 ~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (573)
                      ..+|.+.|++++|+|++++||+|+.|++|+|||+.++.....                                      
T Consensus         7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~--------------------------------------   48 (342)
T 1yfq_A            7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD--------------------------------------   48 (342)
T ss_dssp             SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEE--------------------------------------
T ss_pred             ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccc--------------------------------------
Confidence            457999999999999999999999999999999987642100                                      


Q ss_pred             eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCC-eEEEEeCCCeEEEEEC-CCCeeeEEecC--CCCcEEEEEEcCCC
Q psy2671         186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR-SLASGSGDTTVRFWDV-TTQTPLFKCEG--HKHWVLCIAWSPDS  261 (573)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~-~las~s~d~~i~iwd~-~~~~~~~~~~~--h~~~V~~v~~s~dg  261 (573)
                                    ...+.+|...|.+++|+|+++ +|++|+.|+.|++||+ .++.. ..+.+  |...|.+++|+| +
T Consensus        49 --------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~  112 (342)
T 1yfq_A           49 --------------LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-D  112 (342)
T ss_dssp             --------------EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-T
T ss_pred             --------------ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-C
Confidence                          001226889999999999999 9999999999999999 77654 67778  999999999999 9


Q ss_pred             CeEEEEeeCCeEEEEECCC---------CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-Ce-
Q psy2671         262 KQLVSGCKNGVIHAWDSST---------GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQ-  330 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~-  330 (573)
                      ++|++++.|+.|++||+++         ++.+. .+. |...|.++.|.|.       .+++++.|+.|++||+.. .. 
T Consensus       113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~~  183 (342)
T 1yfq_A          113 DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-NTK-VKNKIFTMDTNSS-------RLIVGMNNSQVQWFRLPLCEDD  183 (342)
T ss_dssp             TEEEEEETTSEEEEECHHHHTTBCEEEEESCSS-SSS-SCCCEEEEEECSS-------EEEEEESTTEEEEEESSCCTTC
T ss_pred             CEEEEEcCCCeEEEEcccccccccccccCCeee-EEe-eCCceEEEEecCC-------cEEEEeCCCeEEEEECCccccc
Confidence            9999999999999999876         54432 233 8889999998762       389999999999999987 43 


Q ss_pred             -EEEEecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         331 -CVRVLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       331 -~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                       .......|...+.+++|++ ++ .+++++.|+.+++|+++.....  .                               
T Consensus       184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~--~-------------------------------  230 (342)
T 1yfq_A          184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDD--Y-------------------------------  230 (342)
T ss_dssp             CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCS--T-------------------------------
T ss_pred             cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcc--c-------------------------------
Confidence             3344556788889999887 55 6778888888888876543000  0                               


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---------cccccEEEEEECCCCCEEEEe
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---------GHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---------~h~~~v~~v~~sp~g~~las~  478 (573)
                                                               .......+.         +|...|.+++|+|++++|+++
T Consensus       231 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  269 (342)
T 1yfq_A          231 -----------------------------------------NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA  269 (342)
T ss_dssp             -----------------------------------------TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred             -----------------------------------------ccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence                                                     001111122         345589999999999999999


Q ss_pred             eCCCcEEEEeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCCc-EEEEe
Q psy2671         479 SFDKSIKLWDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADST-LKVWN  530 (573)
Q Consensus       479 s~dg~i~lwd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~~-v~vwd  530 (573)
                      +.||.|++||..+++.+..+.+| ...|++++  |++++|++++.|++ .+.|.
T Consensus       270 ~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~  321 (342)
T 1yfq_A          270 GSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA  321 (342)
T ss_dssp             ETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred             cCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence            99999999999999999999998 99999999  99999999999998 55554

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=314.02  Aligned_cols=292  Identities=17%  Similarity=0.330  Sum_probs=233.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCC------------CcEEEEEEcCCC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHK------------HWVLCIAWSPDS  261 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~------------~~V~~v~~s~dg  261 (573)
                      .|.+.|.+++|+|+|++||+|+.||.|+|||+.++.           ....+.+|.            ..|.+++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            467899999999999999999999999999998776           467788998            889999999998


Q ss_pred             --CeEEEEeeCCeEEEEECCCCcee---------------------------------------cccccCCcccEEEEEe
Q psy2671         262 --KQLVSGCKNGVIHAWDSSTGKQI---------------------------------------GQPMRGHKQWITALSW  300 (573)
Q Consensus       262 --~~l~sgs~dg~i~vwd~~~~~~~---------------------------------------~~~~~~h~~~v~~~~~  300 (573)
                        .+|++++.|+.|++||+.++...                                       .....+|...|.+++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              79999999999999998764321                                       0114679999999999


Q ss_pred             cccccCCCCCEEEEEeCCCcEEEEECCC-CeEEE-------EecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCC
Q psy2671         301 EPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVR-------VLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDG  370 (573)
Q Consensus       301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~-------~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~  370 (573)
                      .|     ++++|+++ .|+.|++||+.. .+...       .+.+|...|.+++|++++  .+++|+.|++|++||++++
T Consensus       186 ~~-----~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~  259 (447)
T 3dw8_B          186 NS-----DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS  259 (447)
T ss_dssp             CT-----TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred             cC-----CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence            87     56789998 899999999984 44444       256899999999999875  7999999999999999876


Q ss_pred             ee----eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcC
Q psy2671         371 VM----CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNP  446 (573)
Q Consensus       371 ~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~  446 (573)
                      ..    ...+.+|...                                                                
T Consensus       260 ~~~~~~~~~~~~~~~~----------------------------------------------------------------  275 (447)
T 3dw8_B          260 ALCDRHSKLFEEPEDP----------------------------------------------------------------  275 (447)
T ss_dssp             SSSCTTCEEECCC-------------------------------------------------------------------
T ss_pred             ccccceeeEeccCCCc----------------------------------------------------------------
Confidence            54    2223222110                                                                


Q ss_pred             CCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcce---------------EEEEEE
Q psy2671         447 EKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQA---------------VYMVAW  510 (573)
Q Consensus       447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~---------------v~~v~~  510 (573)
                          .....+.+|...|.+++|+|+|++|++++. +.|++||.++ ++.+..+.+|...               ++.++|
T Consensus       276 ----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~  350 (447)
T 3dw8_B          276 ----SNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW  350 (447)
T ss_dssp             ------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred             ----cccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence                001123446678999999999999999999 9999999997 8888888888532               334899


Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCccccccc--------------------------------ccCcCCCEEEEEEccCCCE
Q psy2671         511 SSDSRLLVSGSADSTLKVWNMKTKKIEQD--------------------------------LPGHGDEVYAVDWAPDGEK  558 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~~~~~~~~~--------------------------------l~~h~~~v~~~~~s~d~~~  558 (573)
                      +|++++|++|+.|+.|++||+.+++.+..                                ...+...|..++|+|++++
T Consensus       351 s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~  430 (447)
T 3dw8_B          351 NGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENI  430 (447)
T ss_dssp             CTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSE
T ss_pred             CCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCE
Confidence            99999999999999999999988765320                                0123467899999999999


Q ss_pred             EEEeeCCCcEEEcc
Q psy2671         559 VASGGKDKVLRLWQ  572 (573)
Q Consensus       559 l~s~~~d~~i~iw~  572 (573)
                      ||+++.++ +++|.
T Consensus       431 la~~~~~~-~~~~~  443 (447)
T 3dw8_B          431 IAVATTNN-LYIFQ  443 (447)
T ss_dssp             EEEECSSC-EEEEE
T ss_pred             EEEEecce-eeeec
Confidence            99998887 66664

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.6e-36  Score=296.84  Aligned_cols=300  Identities=20%  Similarity=0.323  Sum_probs=226.4

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.||.+.|++++|+|++++||+|+.||+|+|||+.++....+                                     
T Consensus         6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------------------------------   48 (351)
T 3f3f_A            6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE-------------------------------------   48 (351)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-------------------------------------
T ss_pred             cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-------------------------------------
Confidence            4679999999999999999999999999999999986542211                                     


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCC---------eeeEEecCCCCcEE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQ---------TPLFKCEGHKHWVL  253 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~---------~~~~~~~~h~~~V~  253 (573)
                                    +...+.+|...|.+++|+|  ++++|++|+.|++|++||+.++         +++..+.+|...|.
T Consensus        49 --------------~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~  114 (351)
T 3f3f_A           49 --------------LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY  114 (351)
T ss_dssp             --------------EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE
T ss_pred             --------------ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee
Confidence                          1123457999999999999  6999999999999999999876         55778889999999


Q ss_pred             EEEEcCC--CCeEEEEeeCCeEEEEECCCCceecc------------cccCCcccEEEEEecccccCCCCCEEEEEeCCC
Q psy2671         254 CIAWSPD--SKQLVSGCKNGVIHAWDSSTGKQIGQ------------PMRGHKQWITALSWEPFHLNHQCRRFASSGKDG  319 (573)
Q Consensus       254 ~v~~s~d--g~~l~sgs~dg~i~vwd~~~~~~~~~------------~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg  319 (573)
                      +++|+|+  +.+|++++.||.|++||+++++.+..            ...+|...+.++.|.|...  .+..+++++.++
T Consensus       115 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~l~~~~~~~  192 (351)
T 3f3f_A          115 SVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRF--SPEKLAVSALEQ  192 (351)
T ss_dssp             EEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSS--SCCEEEEEETTE
T ss_pred             EEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCC--CCcEEEEecCCC
Confidence            9999999  99999999999999999988764321            1126778899999988532  357899999999


Q ss_pred             cEEEEECCCCeE--EEEecCCCccEEEEEECCCc-----EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCc
Q psy2671         320 AIRIWDVILSQC--VRVLTSHTRSVTCIRWGGSG-----LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY  392 (573)
Q Consensus       320 ~v~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~-----~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~  392 (573)
                      .+.+|+...++.  ...+.+|...|.+++|++++     .+++++.|+.|++||++.+........+.            
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------  260 (351)
T 3f3f_A          193 AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL------------  260 (351)
T ss_dssp             EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------
T ss_pred             cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc------------
Confidence            998888877764  66788999999999999885     79999999999999976542211100000            


Q ss_pred             eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC
Q psy2671         393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG  472 (573)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g  472 (573)
                                                                                          ..+.....++..
T Consensus       261 --------------------------------------------------------------------~~~~~~~~~~~~  272 (351)
T 3f3f_A          261 --------------------------------------------------------------------TNSNMFDNSADV  272 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------cceeccCCCccc
Confidence                                                                                000001111111


Q ss_pred             C----EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         473 R----IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       473 ~----~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                      .    ....+.....+.+|+....+.+..+.+|...|++++|+|++++|++++.|+.|++|++.+++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~  341 (351)
T 3f3f_A          273 DMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEF  341 (351)
T ss_dssp             ------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred             ccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence            1    1123344556778887778888999999999999999999999999999999999999876543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.5e-35  Score=297.90  Aligned_cols=283  Identities=22%  Similarity=0.446  Sum_probs=241.9

Q ss_pred             EEecCCCCc--EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCc
Q psy2671         243 FKCEGHKHW--VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA  320 (573)
Q Consensus       243 ~~~~~h~~~--V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~  320 (573)
                      ....+|...  +.+++|++  ..+++++.|+.|++||+.+++........|...|.+++|.|     ++++|++++.||.
T Consensus        85 ~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-----~~~~l~~~~~dg~  157 (401)
T 4aez_A           85 LDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-----DGSFLSVGLGNGL  157 (401)
T ss_dssp             EECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-----TSSEEEEEETTSC
T ss_pred             eeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-----CCCEEEEECCCCe
Confidence            334455544  45667765  56889999999999999998876544455889999999987     5679999999999


Q ss_pred             EEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       321 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      |++||+.+++.+..+.+|...|.++.|.+ ..+++++.|+.|++||++ .+.....+.+|...|..++++          
T Consensus       158 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~----------  226 (401)
T 4aez_A          158 VDIYDVESQTKLRTMAGHQARVGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWR----------  226 (401)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEEC----------
T ss_pred             EEEEECcCCeEEEEecCCCCceEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEc----------
Confidence            99999999999999999999999999954 589999999999999998 466677888898888888776          


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCC-CEEEEe
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDG-RIIASA  478 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g-~~las~  478 (573)
                                                 |++.++++|+.|+.|++||+++.. ....+.+|...|.+++|+|++ .+++++
T Consensus       227 ---------------------------~~~~~l~s~~~d~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~p~~~~ll~~~  278 (401)
T 4aez_A          227 ---------------------------SDGLQLASGGNDNVVQIWDARSSI-PKFTKTNHNAAVKAVAWCPWQSNLLATG  278 (401)
T ss_dssp             ---------------------------TTSSEEEEEETTSCEEEEETTCSS-EEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred             ---------------------------CCCCEEEEEeCCCeEEEccCCCCC-ccEEecCCcceEEEEEECCCCCCEEEEe
Confidence                                       457899999999999999998743 455677899999999999976 566665


Q ss_pred             e--CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE--eCCCcEEEEeCCccccc--ccccCcCCCEEEEEE
Q psy2671         479 S--FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG--SADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDW  552 (573)
Q Consensus       479 s--~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~--s~D~~v~vwd~~~~~~~--~~l~~h~~~v~~~~~  552 (573)
                      +  .|+.|++||.++++.+..+. +...|.+++|+|++++|+++  +.|+.|++|++.+++..  ..+.+|...|.+++|
T Consensus       279 ~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~  357 (401)
T 4aez_A          279 GGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSAL  357 (401)
T ss_dssp             CCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEE
T ss_pred             cCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEE
Confidence            5  79999999999999888886 45789999999999999994  48999999999886544  347799999999999


Q ss_pred             ccCCCEEEEeeCCCcEEEcc
Q psy2671         553 APDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       553 s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|++++|++++.||.|++|+
T Consensus       358 s~dg~~l~s~~~dg~i~iw~  377 (401)
T 4aez_A          358 SPDGRILSTAASDENLKFWR  377 (401)
T ss_dssp             CTTSSEEEEECTTSEEEEEE
T ss_pred             CCCCCEEEEEeCCCcEEEEE
Confidence            99999999999999999997

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-35  Score=294.91  Aligned_cols=292  Identities=15%  Similarity=0.241  Sum_probs=241.1

Q ss_pred             EECCCCeeeEEecCCCCcEEEEEEcCC---CCeEEEEeeCCeEEEEECCC-CceecccccCCcccEEEEEecccccCCCC
Q psy2671         234 WDVTTQTPLFKCEGHKHWVLCIAWSPD---SKQLVSGCKNGVIHAWDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQC  309 (573)
Q Consensus       234 wd~~~~~~~~~~~~h~~~V~~v~~s~d---g~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~  309 (573)
                      |+....+.+..+.+|...|.+++|+|+   |++|++|+.||.|++||+.+ +..+...+.+|...|.+++|.|     ++
T Consensus        24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-----~~   98 (368)
T 3mmy_A           24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-----DG   98 (368)
T ss_dssp             CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-----TS
T ss_pred             CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-----CC
Confidence            344555667778999999999999999   69999999999999999988 5555466788999999999987     56


Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE--CCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEE
Q psy2671         310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW--GGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTL  386 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~  386 (573)
                      ++|++++.||.|++||+..++... +..|...|.+++|  ++++ .+++++.|+.|++||++++.....+..+.. +..+
T Consensus        99 ~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~  176 (368)
T 3mmy_A           99 SKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER-CYCA  176 (368)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC-EEEE
T ss_pred             CEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC-ceEE
Confidence            799999999999999999888766 5679999999999  7776 699999999999999998887776665542 2111


Q ss_pred             EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEE
Q psy2671         387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINC  465 (573)
Q Consensus       387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~  465 (573)
                      .                                       +....+++++.++.+++|+++.......... .+...+.+
T Consensus       177 ~---------------------------------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  217 (368)
T 3mmy_A          177 D---------------------------------------VIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRC  217 (368)
T ss_dssp             E---------------------------------------EETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEE
T ss_pred             E---------------------------------------ecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCce
Confidence            1                                       1234788899999999999987654433322 23344666


Q ss_pred             EEECCCCCE----EEEeeCCCcEEEEeCCCC---eEEEeecCCcc------------eEEEEEECCCCCEEEEEeCCCcE
Q psy2671         466 VEFSPDGRI----IASASFDKSIKLWDGRIG---KFITTLRGHVQ------------AVYMVAWSSDSRLLVSGSADSTL  526 (573)
Q Consensus       466 v~~sp~g~~----las~s~dg~i~lwd~~~~---~~~~~~~~h~~------------~v~~v~~s~dg~~las~s~D~~v  526 (573)
                      +.+.++...    +++++.||.|++||.+..   +.+..+.+|..            .|++++|+|++++|++++.|+.|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i  297 (368)
T 3mmy_A          218 VAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRF  297 (368)
T ss_dssp             EEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCE
T ss_pred             EEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeE
Confidence            766665544    999999999999999887   55677778876            69999999999999999999999


Q ss_pred             EEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         527 KVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      ++||+.+++.+..+.+|...|.+++|+|++++|++++.|+..+.|
T Consensus       298 ~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~  342 (368)
T 3mmy_A          298 SFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH  342 (368)
T ss_dssp             EEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred             EEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence            999999999999999999999999999999999999998754444

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.1e-35  Score=292.91  Aligned_cols=292  Identities=17%  Similarity=0.247  Sum_probs=236.1

Q ss_pred             cCCCCCCCcEEEEEEcCC---CCeEEEEeCCCeEEEEECCC-Ceee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         201 SSMPGHAEAVISVKFSPN---GRSLASGSGDTTVRFWDVTT-QTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~---g~~las~s~d~~i~iwd~~~-~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                      ..+.+|.+.|++++|+|+   |++|++|+.|+.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++++.||.|++
T Consensus        33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i  112 (368)
T 3mmy_A           33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKM  112 (368)
T ss_dssp             ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence            457899999999999999   69999999999999999987 5444 678899999999999999999999999999999


Q ss_pred             EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEE
Q psy2671         276 WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYS  355 (573)
Q Consensus       276 wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s  355 (573)
                      ||+++++.+.  ..+|...|.++.|.+   .++++++++++.||.|++||+.+++++..+..|. .+.++.+.++ .+++
T Consensus       113 wd~~~~~~~~--~~~~~~~v~~~~~~~---~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~  185 (368)
T 3mmy_A          113 WDLSSNQAIQ--IAQHDAPVKTIHWIK---APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIYP-MAVV  185 (368)
T ss_dssp             EETTTTEEEE--EEECSSCEEEEEEEE---CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEETT-EEEE
T ss_pred             EEcCCCCcee--eccccCceEEEEEEe---CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecCC-eeEE
Confidence            9999887653  567999999999943   2366789999999999999999998888887765 5666666544 6788


Q ss_pred             EeCCCeEEEEeCCCCeeeEe-c-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         356 ASQDRTIKVWRASDGVMCRT-L-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       356 ~s~d~~i~vw~~~~~~~~~~-~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      ++.++.+++|+++....... . ..+...+..+++..+.                                 ......++
T Consensus       186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~  232 (368)
T 3mmy_A          186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDK---------------------------------QNKPTGFA  232 (368)
T ss_dssp             EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECT---------------------------------TSCEEEEE
T ss_pred             EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccC---------------------------------CCCCCeEE
Confidence            89999999999976543221 1 1112222222221110                                 01123499


Q ss_pred             EEeCCCeEEEEcCCCCc--cceeeeccccc------------cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         434 SGSDDFTLFLWNPEKEK--KSLARMTGHQQ------------LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~--~~~~~~~~h~~------------~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      +++.||.+++|++....  .....+.+|..            .|.+++|+|++++|++|+.||.|++||.++++.+..+.
T Consensus       233 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  312 (368)
T 3mmy_A          233 LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE  312 (368)
T ss_dssp             EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred             EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence            99999999999998653  34455666665            79999999999999999999999999999999999999


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +|...|.+++|+|+|++||+++.|+..+.|++.
T Consensus       313 ~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~  345 (368)
T 3mmy_A          313 QLDQPISACCFNHNGNIFAYASSYDWSKGHEFY  345 (368)
T ss_dssp             CCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred             CCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence            999999999999999999999999876666543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=7.6e-36  Score=293.53  Aligned_cols=306  Identities=19%  Similarity=0.311  Sum_probs=211.2

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----eeeEEecCCCCcEEEEEEcC--CCCeEEEEeeCCeEEE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAWSP--DSKQLVSGCKNGVIHA  275 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~s~--dg~~l~sgs~dg~i~v  275 (573)
                      .+.||.+.|++++|+|++++||+|+.|++|++||+.++    +....+.+|...|.+++|+|  |+++|++|+.||.|++
T Consensus         6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v   85 (351)
T 3f3f_A            6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL   85 (351)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred             cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence            35699999999999999999999999999999999876    45667789999999999999  6999999999999999


Q ss_pred             EECCCCc--------eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE
Q psy2671         276 WDSSTGK--------QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW  347 (573)
Q Consensus       276 wd~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  347 (573)
                      ||++++.        .....+.+|...|.++.|.|..   .+.++++++.||.|++||+..++.+..+... ..+..+. 
T Consensus        86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~~~-  160 (351)
T 3f3f_A           86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAH---LGLKLACLGNDGILRLYDALEPSDLRSWTLT-SEMKVLS-  160 (351)
T ss_dssp             EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGG---GCSEEEEEETTCEEEEEECSSTTCTTCCEEE-EEEESCS-
T ss_pred             EecCCCcccccccCcceeeeecccCCceeEEEEcCCC---CCcEEEEecCCCcEEEecCCChHHhcccccc-ccccccc-
Confidence            9998764        2234466899999999998731   1678999999999999999876543322100 0000000 


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                                                ....+|...+..++++++.                                  .
T Consensus       161 --------------------------~~~~~~~~~~~~~~~~p~~----------------------------------~  180 (351)
T 3f3f_A          161 --------------------------IPPANHLQSDFCLSWCPSR----------------------------------F  180 (351)
T ss_dssp             --------------------------CCCSSCSCCCEEEEECCCS----------------------------------S
T ss_pred             --------------------------cccCCcccceeEEEeccCC----------------------------------C
Confidence                                      0011233334444433210                                  1


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCcc-ceeeeccccccEEEEEECCCC----CEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKK-SLARMTGHQQLINCVEFSPDG----RIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~h~~~v~~v~~sp~g----~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                      .+..+++++.++.+.+|+...... ....+.+|...|++++|+|++    ++|++|+.||.|++||.+.+........+.
T Consensus       181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  260 (351)
T 3f3f_A          181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESL  260 (351)
T ss_dssp             SCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------
T ss_pred             CCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcc
Confidence            256777888888777776554432 355667899999999999998    899999999999999998775544444444


Q ss_pred             ceEEEEEECCCCCEEEEEe----CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGS----ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s----~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .......++++...++.+.    ....+.+|+....+.+..+.+|.+.|++++|+|++++|++++.||.|++|+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~  334 (351)
T 3f3f_A          261 TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWK  334 (351)
T ss_dssp             ------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred             cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence            4444455555555544443    345567777777788888999999999999999999999999999999997

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-36  Score=298.10  Aligned_cols=263  Identities=22%  Similarity=0.376  Sum_probs=210.0

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+.+|.++|++++|+|++++||+|+.|++|+|||+..+...                                     
T Consensus         4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-------------------------------------   46 (379)
T 3jrp_A            4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK-------------------------------------   46 (379)
T ss_dssp             -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE-------------------------------------
T ss_pred             cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce-------------------------------------
Confidence            3467789999999999999999999999999999998643210                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEc
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s  258 (573)
                                      +...+.+|.+.|.+++|+|+  +++|++|+.|++|++||+.+++  .+..+.+|...|.+++|+
T Consensus        47 ----------------~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~  110 (379)
T 3jrp_A           47 ----------------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA  110 (379)
T ss_dssp             ----------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred             ----------------eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence                            11235689999999999987  9999999999999999999886  677888999999999999


Q ss_pred             CC--CCeEEEEeeCCeEEEEECCCCcee-cccccCCcccEEEEEeccccc--------CCCCCEEEEEeCCCcEEEEECC
Q psy2671         259 PD--SKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHL--------NHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       259 ~d--g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~--------~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      |+  +.+|++++.|+.|++||+..+... ...+.+|...|.++.|.|...        ..++..+++++.||.|++||+.
T Consensus       111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~  190 (379)
T 3jrp_A          111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN  190 (379)
T ss_dssp             CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE
T ss_pred             CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec
Confidence            99  999999999999999999887432 234568999999999988421        1146789999999999999987


Q ss_pred             CCe----EEEEecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         328 LSQ----CVRVLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       328 ~~~----~~~~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      .+.    ....+.+|...|.+++|+++   + .+++++.|+.|++|+++++....                         
T Consensus       191 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-------------------------  245 (379)
T 3jrp_A          191 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-------------------------  245 (379)
T ss_dssp             TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC-------------------------
T ss_pred             CCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccc-------------------------
Confidence            653    44567788888999988876   4 57777778888888765431000                         


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS  479 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s  479 (573)
                                                                        .........|...|.+++|+|+|++|++++
T Consensus       246 --------------------------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~  275 (379)
T 3jrp_A          246 --------------------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSG  275 (379)
T ss_dssp             --------------------------------------------------EEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred             --------------------------------------------------eeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence                                                              001111234677899999999999999999


Q ss_pred             CCCcEEEEeCCCCe
Q psy2671         480 FDKSIKLWDGRIGK  493 (573)
Q Consensus       480 ~dg~i~lwd~~~~~  493 (573)
                      .||.|++||...+.
T Consensus       276 ~dg~i~iw~~~~~~  289 (379)
T 3jrp_A          276 GDNKVTLWKENLEG  289 (379)
T ss_dssp             SSSSEEEEEEEETT
T ss_pred             CCCcEEEEeCCCCC
Confidence            99999999987543

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.6e-37  Score=306.95  Aligned_cols=282  Identities=10%  Similarity=0.119  Sum_probs=231.8

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~  286 (573)
                      ...|.+++|||||+++||++.|++|+  |...++.   +.+|...|.+++|+|+|       .++.+.+|+.+...   .
T Consensus        15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~---~   79 (588)
T 2j04_A           15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INCNSKNLFHVKEFPLE-------FENKLDFELAQQNG---L   79 (588)
T ss_dssp             SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC---S
T ss_pred             hccEEEEEECCCCCEEEEEcCCceee--cccccce---ecCCCccEEEEEECCCC-------CcceEEEEeCCCce---E
Confidence            57899999999999999999999999  7555543   47999999999999999       45555555543222   1


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc-----cEEEEEECCCc-EEEEEeCCC
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR-----SVTCIRWGGSG-LIYSASQDR  360 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~-~l~s~s~d~  360 (573)
                      ....|...|.+++|+|     ++.++|+++.||.|++||...  ++..+. |..     .+.+++|+++| .|++|+.||
T Consensus        80 ~~~~~~~~V~~vawSP-----dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DG  151 (588)
T 2j04_A           80 LNSQPVCYPRVCKPSP-----IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDG  151 (588)
T ss_dssp             STTSCSCCEEEEEECS-----SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTS
T ss_pred             eecCCCCcEEEEEECC-----CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCC
Confidence            1225688999999987     678999999999999999544  666667 665     59999999998 799999999


Q ss_pred             eEEEEeCCCCee-------eEec----cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671         361 TIKVWRASDGVM-------CRTL----EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG  429 (573)
Q Consensus       361 ~i~vw~~~~~~~-------~~~~----~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (573)
                      +|++|++.++..       +.++    .+|..+|.++++++                                     +|
T Consensus       152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-------------------------------------dg  194 (588)
T 2j04_A          152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-------------------------------------DV  194 (588)
T ss_dssp             EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-------------------------------------TE
T ss_pred             EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-------------------------------------Cc
Confidence            999999998752       4565    77888999998874                                     46


Q ss_pred             cEEEEEeCCCeEEEEcCCCCcc--ceeee-ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKK--SLARM-TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~--~~~~~-~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                        +++++.|+++++||+.....  ....+ .+|...|.+++|+  |+.||+++ +++|++||...++......+|...|+
T Consensus       195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~  269 (588)
T 2j04_A          195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFH  269 (588)
T ss_dssp             --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred             --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEE
Confidence              88899999999999977653  22345 4788899999999  68999997 69999999998877444448999999


Q ss_pred             EEEE--CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         507 MVAW--SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       507 ~v~~--s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .++|  +||+..|++++.||+ ++|...                .++++||+..+++.  |+++++|+
T Consensus       270 ~va~~~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~--d~~v~lW~  318 (588)
T 2j04_A          270 IIPLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYL--EKKFKKWS  318 (588)
T ss_dssp             EEEETTCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHH--HHHHHHTT
T ss_pred             EEEeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEc--CCEEEEEE
Confidence            9999  999999999999999 999876                15699999877664  89999986

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-36  Score=305.39  Aligned_cols=302  Identities=13%  Similarity=0.216  Sum_probs=239.9

Q ss_pred             CCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCC---Ce---eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671         204 PGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTT---QT---PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       204 ~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~---~~---~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vw  276 (573)
                      .+|.+.|++++|+| ++++||+|+.|++|+|||+.+   +.   ....+ +|...|.+++|+|++++|++|+.||.|++|
T Consensus        60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vw  138 (437)
T 3gre_A           60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVL  138 (437)
T ss_dssp             TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEE
Confidence            68999999999999 999999999999999999876   32   22332 589999999999999999999999999999


Q ss_pred             ECC---CCceecccccCCcccEEEEEeccc-----------ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCc
Q psy2671         277 DSS---TGKQIGQPMRGHKQWITALSWEPF-----------HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTR  340 (573)
Q Consensus       277 d~~---~~~~~~~~~~~h~~~v~~~~~~~~-----------~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~  340 (573)
                      |++   .++... ...+|  .+..+.+.|.           ...+++..+++++.||.|++||+.+++++..+..  |..
T Consensus       139 d~~~~~~~~~~~-~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~  215 (437)
T 3gre_A          139 KVNHYQQESEVK-FLNCE--CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG  215 (437)
T ss_dssp             EEEEEEETTEEE-EEEEE--EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred             EeccccCCceee-ccccc--eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence            985   444321 11222  3334443331           1234678999999999999999999999999888  899


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      .|.+++|++++ .+++|+.|++|++||++++.....+. +|...|..+++++.                           
T Consensus       216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~---------------------------  268 (437)
T 3gre_A          216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF---------------------------  268 (437)
T ss_dssp             CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT---------------------------
T ss_pred             ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc---------------------------
Confidence            99999999877 79999999999999999999888876 77778888876643                           


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                            .++++.++++|+.||+|++||+++.. ....+.+|...+..+.|+|+++.+    .+.              .+
T Consensus       269 ------~s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l----~~~--------------~~  323 (437)
T 3gre_A          269 ------YGKNSVIVVGGSSKTFLTIWNFVKGH-CQYAFINSDEQPSMEHFLPIEKGL----EEL--------------NF  323 (437)
T ss_dssp             ------TCTTEEEEEEESTTEEEEEEETTTTE-EEEEEESSSSCCCGGGGSCBCSSG----GGC--------------CC
T ss_pred             ------cCCCccEEEEEcCCCcEEEEEcCCCc-EEEEEEcCCCCCccceeccccccc----ccc--------------ee
Confidence                  12567899999999999999998654 466777888888888999987665    111              13


Q ss_pred             cC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC---CEEEEEEccCCCEEEEe
Q psy2671         499 RG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD---EVYAVDWAPDGEKVASG  562 (573)
Q Consensus       499 ~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~---~v~~~~~s~d~~~l~s~  562 (573)
                      .+  |...|++++|+ ++++|++|+.|+.|++||+.+++....+.+|..   .+....++++..+++..
T Consensus       324 ~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (437)
T 3gre_A          324 CGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRK  391 (437)
T ss_dssp             CCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEE
T ss_pred             cccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEe
Confidence            44  88899999999 889999999999999999999998888887643   34555666655544433

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.6e-35  Score=289.85  Aligned_cols=264  Identities=18%  Similarity=0.353  Sum_probs=214.0

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEcCC--CCeEEEEeeCCeEEEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAW  276 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s~d--g~~l~sgs~dg~i~vw  276 (573)
                      ..+.||.+.|++++|+|++++||+|+.|+.|+|||+.  ++..+..+.+|...|.+++|+|+  +++|++|+.||.|++|
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw   84 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW   84 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence            4567899999999999999999999999999999998  55667788999999999999987  8999999999999999


Q ss_pred             ECCCCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe--EEEEecCCCccEEEEEECCCcEE
Q psy2671         277 DSSTGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ--CVRVLTSHTRSVTCIRWGGSGLI  353 (573)
Q Consensus       277 d~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~l  353 (573)
                      |+.+++. ....+.+|...|.+++|.|..   .++.+++++.||.|++||+....  ....+..|...|.+++|++....
T Consensus        85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  161 (379)
T 3jrp_A           85 KEENGRWSQIAVHAVHSASVNSVQWAPHE---YGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE  161 (379)
T ss_dssp             EEETTEEEEEEEECCCSSCEEEEEECCGG---GCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred             EcCCCceeEeeeecCCCcceEEEEeCCCC---CCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence            9998862 224566799999999998731   16789999999999999998763  34456678888888888764211


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      ..+..                                                                 ...+++..++
T Consensus       162 ~~~~~-----------------------------------------------------------------~~~~~~~~l~  176 (379)
T 3jrp_A          162 EDGEH-----------------------------------------------------------------NGTKESRKFV  176 (379)
T ss_dssp             -------------------------------------------------------------------------CTTCEEE
T ss_pred             ccccc-----------------------------------------------------------------cCCCCCCEEE
Confidence            00000                                                                 0014567788


Q ss_pred             EEeCCCeEEEEcCCCCcc---ceeeeccccccEEEEEECCC---CCEEEEeeCCCcEEEEeCCCCe-----EEEeecCCc
Q psy2671         434 SGSDDFTLFLWNPEKEKK---SLARMTGHQQLINCVEFSPD---GRIIASASFDKSIKLWDGRIGK-----FITTLRGHV  502 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~---~~~~~~~h~~~v~~v~~sp~---g~~las~s~dg~i~lwd~~~~~-----~~~~~~~h~  502 (573)
                      +++.|+.|++||++....   ....+.+|...|.+++|+|+   +++|++++.||.|++||.++++     .+.....|.
T Consensus       177 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  256 (379)
T 3jrp_A          177 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP  256 (379)
T ss_dssp             EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred             EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC
Confidence            888888888888765432   34567789999999999999   8999999999999999998863     223334588


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ..|++++|+|+|++|++++.|+.|++|++.
T Consensus       257 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~  286 (379)
T 3jrp_A          257 DVLWRASWSLSGNVLALSGGDNKVTLWKEN  286 (379)
T ss_dssp             SCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred             CcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence            899999999999999999999999999986

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.1e-34  Score=291.84  Aligned_cols=287  Identities=19%  Similarity=0.301  Sum_probs=224.4

Q ss_pred             EEEEEEcCCCCe-eEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         113 VISVKFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       113 V~~l~~s~~~~~-lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      ...++++|+... +++++.||.|+|||+.+...+                                              
T Consensus        37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~----------------------------------------------   70 (402)
T 2aq5_A           37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRV----------------------------------------------   70 (402)
T ss_dssp             SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC----------------------------------------------
T ss_pred             CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCC----------------------------------------------
Confidence            345788888754 456899999999998643211                                              


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcC-CCCeEEEEeCCCeEEEEECCCC-------eeeEEecCCCCcEEEEEEcCCC-C
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSP-NGRSLASGSGDTTVRFWDVTTQ-------TPLFKCEGHKHWVLCIAWSPDS-K  262 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~v~~s~dg-~  262 (573)
                           ......+.+|.+.|.+++|+| ++++|++|+.|++|+|||+.++       +++..+.+|...|.+++|+|++ .
T Consensus        71 -----~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~  145 (402)
T 2aq5_A           71 -----DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQN  145 (402)
T ss_dssp             -----CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTT
T ss_pred             -----CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCC
Confidence                 011234678999999999999 8999999999999999999987       5678889999999999999998 6


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccc-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCc
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPM-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTR  340 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~  340 (573)
                      +|++|+.||.|++||+++++.+.... .+|...|.+++|.|     ++++|++++.||.|++||+.+++.+..+ ..|..
T Consensus       146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~  220 (402)
T 2aq5_A          146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-----DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG  220 (402)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-----TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS
T ss_pred             EEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECC-----CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC
Confidence            99999999999999999987664332 78999999999987     5678999999999999999998888877 67776


Q ss_pred             c-EEEEEECCCcE-EEEE---eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         341 S-VTCIRWGGSGL-IYSA---SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       341 ~-v~~~~~~~~~~-l~s~---s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      . +.++.|++++. +++|   +.|+.|++||++++                                             
T Consensus       221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~---------------------------------------------  255 (402)
T 2aq5_A          221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL---------------------------------------------  255 (402)
T ss_dssp             SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC---------------------------------------------
T ss_pred             CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc---------------------------------------------
Confidence            5 77777776663 3444   45666666665432                                             


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee-eeccccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCCCe
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA-RMTGHQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRIGK  493 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~-~~~~h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~~~  493 (573)
                                                        ..... ....|...+.+++|+|++++|++ |+.||.|++||..+++
T Consensus       256 ----------------------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~  301 (402)
T 2aq5_A          256 ----------------------------------EEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA  301 (402)
T ss_dssp             ----------------------------------SSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred             ----------------------------------cCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence                                              21111 11235567899999999999875 5579999999999877


Q ss_pred             E-EEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         494 F-ITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       494 ~-~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      . +..+..  |...|.+++|+|++.++++  .|+.+++|++.++++
T Consensus       302 ~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          302 PFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC  345 (402)
T ss_dssp             TCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred             cceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence            3 444443  4588999999999998874  567999999987643

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=4e-34  Score=282.20  Aligned_cols=286  Identities=14%  Similarity=0.177  Sum_probs=206.8

Q ss_pred             EEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEE
Q psy2671         233 FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRF  312 (573)
Q Consensus       233 iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l  312 (573)
                      ||++.+..++....+|...|++++|+|||++|++|+.++ +++|+..++......   +...+..+.+.+     .++.+
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~   73 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---EMRHLSKVRMLH-----RTNYV   73 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---ECSCCCEEEECT-----TSSEE
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---ecCCeEEEEEcC-----CCCEE
Confidence            567777778777889999999999999999999988775 789998876544221   111244455443     23444


Q ss_pred             -EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCcceeeEEEecc
Q psy2671         313 -ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG-VMCRTLEGHAHWVNTLALST  390 (573)
Q Consensus       313 -~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~  390 (573)
                       ++++.|++|++||..+++++..+. |...|.++.++++..+++  .|+.|++|++.++ ..+..+..   .....++  
T Consensus        74 ~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~--  145 (355)
T 3vu4_A           74 AFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEF--  145 (355)
T ss_dssp             EEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEE--
T ss_pred             EEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEE--
Confidence             667888999999999999888876 566899999988764433  4889999999887 54443332   1111111  


Q ss_pred             CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE--EeCCCeEEEEcCCCCc--------------cc-e
Q psy2671         391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS--GSDDFTLFLWNPEKEK--------------KS-L  453 (573)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--g~~dg~i~lwd~~~~~--------------~~-~  453 (573)
                                                         ++  .+++.  |+.||+|++||+.+..              .+ .
T Consensus       146 -----------------------------------s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~  188 (355)
T 3vu4_A          146 -----------------------------------SN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKG  188 (355)
T ss_dssp             -----------------------------------ET--TEEEEEESSCTTCEEEEECCC------------------CC
T ss_pred             -----------------------------------Ec--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCccc
Confidence                                               12  34554  6899999999998654              11 5


Q ss_pred             eeeccccccEEEEEECCCCCEEEEeeCCCc-EEEEeCCCCeEEEeec-C-CcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         454 ARMTGHQQLINCVEFSPDGRIIASASFDKS-IKLWDGRIGKFITTLR-G-HVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       454 ~~~~~h~~~v~~v~~sp~g~~las~s~dg~-i~lwd~~~~~~~~~~~-~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ..+.+|...|++++|+|+|++||+|+.||+ |++||.++++.+..+. + |...|++++|+|||++|++++.|++|++||
T Consensus       189 ~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~  268 (355)
T 3vu4_A          189 VLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE  268 (355)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred             EEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence            678899999999999999999999999998 9999999999999998 6 999999999999999999999999999999


Q ss_pred             CCcccccc--ccc---------------------CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         531 MKTKKIEQ--DLP---------------------GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       531 ~~~~~~~~--~l~---------------------~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++......  .+.                     .+......++|++|++.|++++.||.+++|+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~  333 (355)
T 3vu4_A          269 IFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFK  333 (355)
T ss_dssp             SSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEE
T ss_pred             ccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            97653211  111                     1122346789999999999999999999985

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-34  Score=312.67  Aligned_cols=262  Identities=22%  Similarity=0.376  Sum_probs=209.0

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ..+.||.++|++++|+|++++||+|+.||+|+|||+.++...                                      
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~--------------------------------------   44 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK--------------------------------------   44 (753)
T ss_dssp             -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEE--------------------------------------
T ss_pred             eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCc--------------------------------------
Confidence            357799999999999999999999999999999998743210                                      


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCC--CCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN--GRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~--g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~  259 (573)
                                     +...+.+|.++|.+++|+|+  +++|++|+.||+|++||+.++.  .+....+|...|.+++|+|
T Consensus        45 ---------------~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp  109 (753)
T 3jro_A           45 ---------------LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAP  109 (753)
T ss_dssp             ---------------EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC
T ss_pred             ---------------cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECC
Confidence                           11235689999999999988  9999999999999999999886  6777889999999999999


Q ss_pred             C--CCeEEEEeeCCeEEEEECCCCcee-cccccCCcccEEEEEeccccc--------CCCCCEEEEEeCCCcEEEEECCC
Q psy2671         260 D--SKQLVSGCKNGVIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHL--------NHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       260 d--g~~l~sgs~dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~--------~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      +  ++.+++|+.||.|++||+.++... ...+.+|...|.++.|.|...        ..++..+++++.||.|++||+..
T Consensus       110 ~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~  189 (753)
T 3jro_A          110 HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNS  189 (753)
T ss_dssp             GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEET
T ss_pred             CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccC
Confidence            9  999999999999999999877432 234568999999999988421        11467899999999999999876


Q ss_pred             C----eEEEEecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         329 S----QCVRVLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       329 ~----~~~~~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      +    .....+.+|...|.+++|+++   + .+++++.|++|++||+.++....                          
T Consensus       190 ~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~--------------------------  243 (753)
T 3jro_A          190 DAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW--------------------------  243 (753)
T ss_dssp             TTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC--------------------------
T ss_pred             CcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc--------------------------
Confidence            6    456677889999999999876   4 57778888888888765431100                          


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                                                                       ........+|...|.+++|+|+|+++++|+.
T Consensus       244 -------------------------------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~  274 (753)
T 3jro_A          244 -------------------------------------------------KKTLLKEEKFPDVLWRASWSLSGNVLALSGG  274 (753)
T ss_dssp             -------------------------------------------------BCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred             -------------------------------------------------eeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence                                                             0011222356778999999999999999999


Q ss_pred             CCcEEEEeCCCCe
Q psy2671         481 DKSIKLWDGRIGK  493 (573)
Q Consensus       481 dg~i~lwd~~~~~  493 (573)
                      ||.|++||..++.
T Consensus       275 Dg~I~vwd~~~~~  287 (753)
T 3jro_A          275 DNKVTLWKENLEG  287 (753)
T ss_dssp             SSCEECCBCCSSS
T ss_pred             CCEEEEEecCCCC
Confidence            9999999988643

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=2.4e-34  Score=287.96  Aligned_cols=265  Identities=12%  Similarity=0.075  Sum_probs=181.5

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee----cccccCCcccEEEEEeccccc---CCCCCEEEEEeCCCc
Q psy2671         248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI----GQPMRGHKQWITALSWEPFHL---NHQCRRFASSGKDGA  320 (573)
Q Consensus       248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~----~~~~~~h~~~v~~~~~~~~~~---~~~~~~l~s~~~dg~  320 (573)
                      |...+....+++++.+|++|+.|++|++||.+++...    ...+.||...|.+++|.|...   ..++++|+++|.|++
T Consensus        88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t  167 (393)
T 4gq1_A           88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT  167 (393)
T ss_dssp             ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred             cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence            3344455567778889999999999999999887543    245789999999999998532   125679999999999


Q ss_pred             EEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEE
Q psy2671         321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       321 v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      ||+||+..+.+...+..|...+.+++|+|++  .+++++.|++|++||++++........+......             
T Consensus       168 v~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~-------------  234 (393)
T 4gq1_A          168 LIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP-------------  234 (393)
T ss_dssp             EEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC-------------
T ss_pred             EEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc-------------
Confidence            9999999888888888899999999999875  6999999999999999887654433322111000             


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC-CCCCEEEE
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS-PDGRIIAS  477 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s-p~g~~las  477 (573)
                                                      ...+.....          ........+|...+.+++|+ |+|+.|++
T Consensus       235 --------------------------------~~~s~~~~~----------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s  272 (393)
T 4gq1_A          235 --------------------------------WLLTLNTLP----------LVNTCHSSGIASSLANVRWIGSDGSGILA  272 (393)
T ss_dssp             --------------------------------CSEEEESGG----------GC------CCSSSCSEEEEETTTTCEEEE
T ss_pred             --------------------------------eEEeccccc----------ceeeeecccccccceeeeeecCCCCEEEE
Confidence                                            000000000          00111234677788899986 79999999


Q ss_pred             eeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECC--------------------CCCEEEEEeCCCcEEEEeCCccccc
Q psy2671         478 ASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSS--------------------DSRLLVSGSADSTLKVWNMKTKKIE  537 (573)
Q Consensus       478 ~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~--------------------dg~~las~s~D~~v~vwd~~~~~~~  537 (573)
                      ++.|+++++||+.+++....+..|...+..+.++|                    ++.++++|+.|++|++||+.+++..
T Consensus       273 ~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~  352 (393)
T 4gq1_A          273 MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN  352 (393)
T ss_dssp             ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred             EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence            99999999999998877777766665555444433                    3446788889999999999999888


Q ss_pred             ccccCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         538 QDLPGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       538 ~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                      ..+.+|...|.+++|||||++||+++.||.
T Consensus       353 ~~~~~~~~~V~svafspdG~~LA~as~~Gv  382 (393)
T 4gq1_A          353 SIPIQLGMPIVDFCWHQDGSHLAIATEGSV  382 (393)
T ss_dssp             EEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred             EEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence            888889999999999999999999998885

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.1e-33  Score=284.52  Aligned_cols=277  Identities=19%  Similarity=0.367  Sum_probs=220.0

Q ss_pred             EEEEEcCCCCeE-EEEeCCCeEEEEECCCCe----eeEEecCCCCcEEEEEEcC-CCCeEEEEeeCCeEEEEECCCCce-
Q psy2671         211 ISVKFSPNGRSL-ASGSGDTTVRFWDVTTQT----PLFKCEGHKHWVLCIAWSP-DSKQLVSGCKNGVIHAWDSSTGKQ-  283 (573)
Q Consensus       211 ~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~s~-dg~~l~sgs~dg~i~vwd~~~~~~-  283 (573)
                      ..++++|+...+ ++++.||.|+||++....    .+..+.+|...|.+++|+| ++++|++|+.||.|++||+.++.. 
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~  117 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV  117 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence            357889886544 457899999999986542    3445779999999999999 999999999999999999988742 


Q ss_pred             -----ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--cCCCccEEEEEECCCc-EEEE
Q psy2671         284 -----IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--TSHTRSVTCIRWGGSG-LIYS  355 (573)
Q Consensus       284 -----~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~-~l~s  355 (573)
                           ....+.+|...|.+++|.|..    .+.+++++.||.|++||+.+++.+..+  ..|...|.+++|++++ .+++
T Consensus       118 ~~~~~~~~~~~~h~~~v~~~~~~p~~----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  193 (402)
T 2aq5_A          118 LPLREPVITLEGHTKRVGIVAWHPTA----QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICT  193 (402)
T ss_dssp             SCBCSCSEEEECCSSCEEEEEECSSB----TTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred             cccCCceEEecCCCCeEEEEEECcCC----CCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEE
Confidence                 223567899999999998731    258999999999999999999998888  7899999999998765 5777


Q ss_pred             EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671         356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       356 ~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg  435 (573)
                      ++.|+.|++||++++.....+                                                           
T Consensus       194 ~~~d~~i~iwd~~~~~~~~~~-----------------------------------------------------------  214 (402)
T 2aq5_A          194 SCRDKRVRVIEPRKGTVVAEK-----------------------------------------------------------  214 (402)
T ss_dssp             EETTSEEEEEETTTTEEEEEE-----------------------------------------------------------
T ss_pred             EecCCcEEEEeCCCCceeeee-----------------------------------------------------------
Confidence            778888888877655433222                                                           


Q ss_pred             eCCCeEEEEcCCCCccceeeecccccc-EEEEEECCCCCEEEEe---eCCCcEEEEeCCCCeE-EEee-cCCcceEEEEE
Q psy2671         436 SDDFTLFLWNPEKEKKSLARMTGHQQL-INCVEFSPDGRIIASA---SFDKSIKLWDGRIGKF-ITTL-RGHVQAVYMVA  509 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~~~~h~~~-v~~v~~sp~g~~las~---s~dg~i~lwd~~~~~~-~~~~-~~h~~~v~~v~  509 (573)
                                          ..+|... +.+++|+|++++|++|   +.|+.|++||.++++. +... ..|...+.+++
T Consensus       215 --------------------~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~  274 (402)
T 2aq5_A          215 --------------------DRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPF  274 (402)
T ss_dssp             --------------------ECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred             --------------------ccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEE
Confidence                                0234333 7789999999999999   7999999999988654 2222 24667899999


Q ss_pred             ECCCCCEEEE-EeCCCcEEEEeCCcccc-cccccC--cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         510 WSSDSRLLVS-GSADSTLKVWNMKTKKI-EQDLPG--HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       510 ~s~dg~~las-~s~D~~v~vwd~~~~~~-~~~l~~--h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |+|++++|++ ++.|+.|++||+.+++. +..+..  |.+.|.+++|+|++.++++  .|+.+++|+
T Consensus       275 ~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~  339 (402)
T 2aq5_A          275 FDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK  339 (402)
T ss_dssp             EETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred             EcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence            9999999875 55799999999998874 444444  4589999999999988764  566899996

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9e-33  Score=282.10  Aligned_cols=277  Identities=14%  Similarity=0.120  Sum_probs=215.1

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe---eeEEec--------------------------------------
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCE--------------------------------------  246 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~---~~~~~~--------------------------------------  246 (573)
                      .++.+++|+|+|++|+++ .++.|++||+.+++   .+..+.                                      
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            467899999999966665 57799999998887   544443                                      


Q ss_pred             ----------------CCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECC--CCceeccccc--CCcccEEEEEeccccc
Q psy2671         247 ----------------GHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSS--TGKQIGQPMR--GHKQWITALSWEPFHL  305 (573)
Q Consensus       247 ----------------~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~--~~~~~~~~~~--~h~~~v~~~~~~~~~~  305 (573)
                                      +|...|.+++|+|++++| ++|+.||.|++||+.  ++..+. .+.  .|...|.+++|.|   
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~~~~sp---  159 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK-LRKRFCFSKRPNAISIAE---  159 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE-EEEEEECSSCEEEEEECT---
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee-eeecccCCCCceEEEEcC---
Confidence                            234479999999999996 899999999999998  666543 233  5678899999977   


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEE----EecCCCccEEEEEECCC---c-EEEEEeCCCeEEEEeCCCCeeeEecc
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVR----VLTSHTRSVTCIRWGGS---G-LIYSASQDRTIKVWRASDGVMCRTLE  377 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~---~-~l~s~s~d~~i~vw~~~~~~~~~~~~  377 (573)
                        ++++|++++.+|.+++|++.......    .+.+|...|.+++|+++   + .+++++.|++|++||+.++       
T Consensus       160 --~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~-------  230 (450)
T 2vdu_B          160 --DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC-------  230 (450)
T ss_dssp             --TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT-------
T ss_pred             --CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC-------
Confidence              56899999999999999998766443    66678888888888765   4 5666666666666665432       


Q ss_pred             CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec
Q psy2671         378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT  457 (573)
Q Consensus       378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~  457 (573)
                                                                                              ......+.
T Consensus       231 ------------------------------------------------------------------------~~~~~~~~  238 (450)
T 2vdu_B          231 ------------------------------------------------------------------------FIVDKWLF  238 (450)
T ss_dssp             ------------------------------------------------------------------------TCEEEECC
T ss_pred             ------------------------------------------------------------------------ceeeeeec
Confidence                                                                                    21112244


Q ss_pred             cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------------------cceEEEEEECC
Q psy2671         458 GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------------------VQAVYMVAWSS  512 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------------------~~~v~~v~~s~  512 (573)
                      +|...|.+++|+ ++++|++++.|+.|++||.++++.+..+..+                         ...|.+++|+|
T Consensus       239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~  317 (450)
T 2vdu_B          239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK  317 (450)
T ss_dssp             CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred             CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence            688889999999 9999999999999999999999988777532                         34689999999


Q ss_pred             CCCEEEEEe-CCCcEEEEeC--Ccc---cccccccCcCCCEEEEEEccCCCEEEEeeC------CCcEEEcc
Q psy2671         513 DSRLLVSGS-ADSTLKVWNM--KTK---KIEQDLPGHGDEVYAVDWAPDGEKVASGGK------DKVLRLWQ  572 (573)
Q Consensus       513 dg~~las~s-~D~~v~vwd~--~~~---~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~------d~~i~iw~  572 (573)
                      ++++|++++ .|+.|++|++  ..+   +.+..+.+| +.|.+++|+|++.+++.++.      +..|++|.
T Consensus       318 ~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~  388 (450)
T 2vdu_B          318 NLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE  388 (450)
T ss_dssp             SSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE
T ss_pred             CCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEE
Confidence            999999998 8999999999  555   566777888 88999999996433333343      44577774

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-32  Score=278.28  Aligned_cols=360  Identities=13%  Similarity=0.055  Sum_probs=238.0

Q ss_pred             cccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCc---ceeeecCCCee-eeecccccccccccccCCCCCC-ccceEEEE
Q psy2671         110 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT---PLFKCEGTPYL-FYVNETEITKTLADVLPLDTLN-TEEVVDIV  184 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  184 (573)
                      ..++.+++|+|+|++|+++ .++.|++||+.+++   .+......... ..+........   ...+.... .+......
T Consensus         4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~   79 (450)
T 2vdu_B            4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQ---QGQSSENENENKKLKSN   79 (450)
T ss_dssp             ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhh---ccccccccccccccccC
Confidence            4578899999999977665 57899999999998   54433221100 00000000000   00000000 00000000


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECC--CCeeeEEec--CCCCcEEEEEEcC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVT--TQTPLFKCE--GHKHWVLCIAWSP  259 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~--~~~~~~~~~--~h~~~V~~v~~s~  259 (573)
                      ...................++|.+.|.+++|+|++++| ++|+.|++|+|||+.  ++..+..+.  .|...|.+++|+|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp  159 (450)
T 2vdu_B           80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE  159 (450)
T ss_dssp             --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred             cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence            00000000000011123456889999999999999996 899999999999998  777776665  6778899999999


Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceec---ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-e
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIG---QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-L  335 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~  335 (573)
                      ++++|++|+.+|.+++|++.++....   ..+.+|...|.+++|.|..  ..+++|++++.|++|++||+.+++.+.. +
T Consensus       160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~--~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~  237 (450)
T 2vdu_B          160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDS--DGHQFIITSDRDEHIKISHYPQCFIVDKWL  237 (450)
T ss_dssp             TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECT--TSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred             CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCC--CCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence            99999999999999999998776432   2567899999999998731  1167899999999999999998887776 6


Q ss_pred             cCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671         336 TSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES  414 (573)
Q Consensus       336 ~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  414 (573)
                      .+|...|.+++|+ ++ .+++++.|++|++||+.++.....+..+.. +..+.+..                        
T Consensus       238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-~~~~~~~~------------------------  291 (450)
T 2vdu_B          238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSL-IKPYLNDQ------------------------  291 (450)
T ss_dssp             CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHH-HGGGCCTT------------------------
T ss_pred             cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhh-hhhhhhhc------------------------
Confidence            6899999999999 65 899999999999999999877665543210 00000000                        


Q ss_pred             hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeC--CC
Q psy2671         415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDG--RI  491 (573)
Q Consensus       415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~--~~  491 (573)
                                ..+.. .+.                   ..........|.+++|+|++++|++++ .|+.|++||+  ..
T Consensus       292 ----------~~~~~-~~~-------------------~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~  341 (450)
T 2vdu_B          292 ----------HLAPP-RFQ-------------------NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ  341 (450)
T ss_dssp             ----------SBC------------------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS
T ss_pred             ----------ccccc-ccc-------------------ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC
Confidence                      00000 000                   000012245689999999999999998 8999999999  56


Q ss_pred             C---eEEEeecCCcceEEEEEECCCCCEEEEEeC------CCcEEEEeCC
Q psy2671         492 G---KFITTLRGHVQAVYMVAWSSDSRLLVSGSA------DSTLKVWNMK  532 (573)
Q Consensus       492 ~---~~~~~~~~h~~~v~~v~~s~dg~~las~s~------D~~v~vwd~~  532 (573)
                      +   +.+..+.+| ..|.+++|+|++.++++++.      +..|++|.+.
T Consensus       342 ~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~  390 (450)
T 2vdu_B          342 KGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN  390 (450)
T ss_dssp             TTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred             CCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence            5   677788888 78999999996544444443      5568999764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-33  Score=274.67  Aligned_cols=273  Identities=12%  Similarity=0.048  Sum_probs=214.3

Q ss_pred             EEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc
Q psy2671         213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK  292 (573)
Q Consensus       213 ~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~  292 (573)
                      ..+.+++.++++|+.|++|++||+.+++.+..+.  ...|.++.|+|+   +++++.|++|++|+...            
T Consensus        42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------  104 (343)
T 3lrv_A           42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------  104 (343)
T ss_dssp             SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT------------
T ss_pred             hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC------------
Confidence            3455678899999999999999999988777665  456788889887   99999999999998642            


Q ss_pred             ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCccEEEEEECC--Cc-EEEEEeCCCeEEEEeCC
Q psy2671         293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGG--SG-LIYSASQDRTIKVWRAS  368 (573)
Q Consensus       293 ~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~--~~-~l~s~s~d~~i~vw~~~  368 (573)
                                                 .+.+|+..+++.++.+. .|...|.+++|++  ++ .+++++.|++|++||++
T Consensus       105 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~  157 (343)
T 3lrv_A          105 ---------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE  157 (343)
T ss_dssp             ---------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS
T ss_pred             ---------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC
Confidence                                       24567777766555443 7778999999998  66 78899999999999999


Q ss_pred             CCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671         369 DGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE  447 (573)
Q Consensus       369 ~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~  447 (573)
                      ++........ |...+.+++++                                     |++.++++|+.||.|++||++
T Consensus       158 ~~~~~~~~~~~~~~~i~~~~~~-------------------------------------pdg~~lasg~~dg~i~iwd~~  200 (343)
T 3lrv_A          158 DDSQYIVHSAKSDVEYSSGVLH-------------------------------------KDSLLLALYSPDGILDVYNLS  200 (343)
T ss_dssp             SSCEEEEECCCSSCCCCEEEEC-------------------------------------TTSCEEEEECTTSCEEEEESS
T ss_pred             CCcEEEEEecCCCCceEEEEEC-------------------------------------CCCCEEEEEcCCCEEEEEECC
Confidence            9887665533 34456666655                                     668899999999999999998


Q ss_pred             CCccceeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEE--EEEECCCCCEEEEEe
Q psy2671         448 KEKKSLARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVY--MVAWSSDSRLLVSGS  521 (573)
Q Consensus       448 ~~~~~~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~--~v~~s~dg~~las~s  521 (573)
                      +.......+.+ |...|++++|+|+|.+|++++ |+.|++||+++++.+..+..   |...+.  +++|+|+|++|++++
T Consensus       201 ~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s  279 (343)
T 3lrv_A          201 SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYS  279 (343)
T ss_dssp             CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEE
T ss_pred             CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEec
Confidence            87655356666 999999999999999999999 55999999998876555443   434443  699999999999999


Q ss_pred             C-CCcEEEEeCCcccccccccCcCCCEEEEEEcc---CCCEEEEeeCCCcEEEc
Q psy2671         522 A-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP---DGEKVASGGKDKVLRLW  571 (573)
Q Consensus       522 ~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~---d~~~l~s~~~d~~i~iw  571 (573)
                      . |+.|++|++.........    .++..+.|++   +.+.|++++.|+.++++
T Consensus       280 ~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~  329 (343)
T 3lrv_A          280 NESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI  329 (343)
T ss_dssp             TTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred             CCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence            8 999999999665433222    4677888888   88899999999988876

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-32  Score=270.67  Aligned_cols=253  Identities=18%  Similarity=0.292  Sum_probs=211.4

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      .+.||.+.|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus        27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~  106 (369)
T 3zwl_B           27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG  106 (369)
T ss_dssp             EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred             EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence            46699999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-----CcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-----GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~  356 (573)
                      +.+... . +...+.++.|.|     +++.+++++.+     |.|++||+........+                     
T Consensus       107 ~~~~~~-~-~~~~v~~~~~~~-----~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~---------------------  158 (369)
T 3zwl_B          107 QCVATW-K-SPVPVKRVEFSP-----CGNYFLAILDNVMKNPGSINIYEIERDSATHEL---------------------  158 (369)
T ss_dssp             CEEEEE-E-CSSCEEEEEECT-----TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---------------------
T ss_pred             cEEEEe-e-cCCCeEEEEEcc-----CCCEEEEecCCccCCCCEEEEEEecCCccceee---------------------
Confidence            766433 2 777889998876     56678887777     67777664322100000                     


Q ss_pred             eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         357 SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       357 s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                            .                                                                      .. 
T Consensus       159 ------~----------------------------------------------------------------------~~-  161 (369)
T 3zwl_B          159 ------T----------------------------------------------------------------------KV-  161 (369)
T ss_dssp             ------E----------------------------------------------------------------------EE-
T ss_pred             ------c----------------------------------------------------------------------cc-
Confidence                  0                                                                      00 


Q ss_pred             CCCeEEEEcCCCCccceeeeccccc--cEEEEEECCCCCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcceEEEEEECCC
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQ--LINCVEFSPDGRIIASASFDKSIKLWDGRI-GKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~--~v~~v~~sp~g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                              .    ......+..|..  .+.+++|+|++++|++++.||.|++||.++ ++.+..+..|...|.+++|+|+
T Consensus       162 --------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~  229 (369)
T 3zwl_B          162 --------S----EEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPD  229 (369)
T ss_dssp             --------C----SSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTT
T ss_pred             --------c----cceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCC
Confidence                    0    001112223333  799999999999999999999999999998 7888899999999999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCC--------------cEEEcc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK--------------VLRLWQ  572 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~--------------~i~iw~  572 (573)
                      +++|++++.|+.|++||+++++....+. +...+.++.|+|+++++++++.++              .+++|+
T Consensus       230 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d  301 (369)
T 3zwl_B          230 LTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH  301 (369)
T ss_dssp             SSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred             CCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence            9999999999999999999998887776 678899999999999999999998              788886

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=4.1e-32  Score=255.39  Aligned_cols=282  Identities=16%  Similarity=0.152  Sum_probs=206.8

Q ss_pred             EEEEEEcCCCC---eEEEEeCCCeEEEEECCCC---eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671         210 VISVKFSPNGR---SLASGSGDTTVRFWDVTTQ---TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       210 V~~~~fsp~g~---~las~s~d~~i~iwd~~~~---~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      +.++.|-..|-   .+++++. .+|++|+..++   +.+++..+|+.+|..+.|.||..-|++..-.             
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------  107 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG-------------  107 (356)
T ss_dssp             EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC-------------
T ss_pred             EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec-------------
Confidence            44555544332   4667765 59999999998   8899999999999999999987655543211             


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEe---CCC
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS---QDR  360 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s---~d~  360 (573)
                           .-+...|.++++.|... .-+..+++++.+  +++|++..+                      .++..+   .|+
T Consensus       108 -----~~~~~~v~sla~spd~~-~~~~~l~s~g~~--~~v~~l~~g----------------------~lv~ss~~g~d~  157 (356)
T 2w18_A          108 -----NLEIREIRALFCSSDDE-SEKQVLLKSGNI--KAVLGLTKR----------------------RLVSSSGTLSDQ  157 (356)
T ss_dssp             -----SSSEEEEEEECC-------CCEEEEEEEEE--EEEEEETTT----------------------EEEEEESSSTTC
T ss_pred             -----cccccceEEEEECCCcc-ccccEEEeCCCe--EEEEecCCC----------------------cEEEecccCCCC
Confidence                 12345677777766311 115677877744  677765433                      333333   588


Q ss_pred             eEEEEeC-CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         361 TIKVWRA-SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       361 ~i~vw~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      .|++|++ .+|+....+.+|...+..+++++-                                  ..++..|++|+.|+
T Consensus       158 ~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~----------------------------------~g~~~~LaSgS~D~  203 (356)
T 2w18_A          158 QVEVMTFAEDGGGKENQFLMPPEETILTFAEV----------------------------------QGMQEALLGTTIMN  203 (356)
T ss_dssp             EEEEEEECTTSCEEEEEEECCCSSCEEEEEEE----------------------------------ETSTTEEEEEETTS
T ss_pred             cEEEEEECCCCceeeeeccCCCceeeEEeecc----------------------------------CCCCceEEEecCCC
Confidence            8999998 457777888888888888877741                                  02478999999999


Q ss_pred             eEEEEcCCCCccceeeecccc---ccEEEEEECCCCCEE------------EEeeCCCcEEEEeCCCCeEEEee-----c
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQ---QLINCVEFSPDGRII------------ASASFDKSIKLWDGRIGKFITTL-----R  499 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~---~~v~~v~~sp~g~~l------------as~s~dg~i~lwd~~~~~~~~~~-----~  499 (573)
                      +|++||+.+++ .+..+.+|.   ..+.+++|+|+|+++            ++|+.|++|++||..+++.+..+     .
T Consensus       204 TIkIWDl~TGk-~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~  282 (356)
T 2w18_A          204 NIVIWNLKTGQ-LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP  282 (356)
T ss_dssp             EEEEEETTTCC-EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred             cEEEEECCCCc-EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence            99999998765 455565543   367788999999986            67889999999999999987765     4


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEE-EEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY-AVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~-~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|...+.+..++  +.++|+++.|++|+|||+.+++++..+.+|.+.+. +++|||||++|+||+.|++||||+
T Consensus       283 Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd  354 (356)
T 2w18_A          283 GQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH  354 (356)
T ss_dssp             TCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred             CCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence            776665555444  88999999999999999999999999999988766 589999999999999999999997

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.5e-33  Score=282.21  Aligned_cols=289  Identities=16%  Similarity=0.155  Sum_probs=189.0

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      ....|...+....+++++++||+|+.|++|||||..++.+...                                     
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~-------------------------------------  126 (393)
T 4gq1_A           84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQ-------------------------------------  126 (393)
T ss_dssp             ECC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEE-------------------------------------
T ss_pred             cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcccee-------------------------------------
Confidence            3445666777777888899999999999999999987653211                                     


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcC--------CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP--------NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIA  256 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp--------~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~  256 (573)
                                   .....+.||.+.|.+++|+|        |+++||+||.|++|+|||+.++.++..+.+|...|.+++
T Consensus       127 -------------~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~  193 (393)
T 4gq1_A          127 -------------HVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQ  193 (393)
T ss_dssp             -------------EEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEE
T ss_pred             -------------eeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEE
Confidence                         11245789999999999998        889999999999999999999888888889999999999


Q ss_pred             EcCCCC-eEEEEeeCCeEEEEECCCCceecccc---cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         257 WSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       257 ~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      |+|++. +|++|+.|++|++||+.+++......   ..+..++......+                          ....
T Consensus       194 ~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~--------------------------~~~~  247 (393)
T 4gq1_A          194 FRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP--------------------------LVNT  247 (393)
T ss_dssp             EETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG--------------------------GC--
T ss_pred             ECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc--------------------------ceee
Confidence            999875 79999999999999999876542211   11111111111111                          0111


Q ss_pred             EEecCCCccEEEEEEC-CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCC
Q psy2671         333 RVLTSHTRSVTCIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPAN  410 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~-~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~  410 (573)
                      ....+|...+.++.|. +++ .+++++.|+++++||+..+.....+..|...+..+.+.++.                  
T Consensus       248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~------------------  309 (393)
T 4gq1_A          248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNV------------------  309 (393)
T ss_dssp             ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSE------------------
T ss_pred             eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccc------------------
Confidence            2234678888999885 444 79999999999999998877666665554444333322210                  


Q ss_pred             chhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC--CCCEEEEeeCCCcEEEEe
Q psy2671         411 PEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDKSIKLWD  488 (573)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~las~s~dg~i~lwd  488 (573)
                                                                 .....+...+. ..|+|  ++.++++|+.||+|++||
T Consensus       310 -------------------------------------------~~~~~~~~~~~-~~~~~~~~~~~~~sgs~Dg~V~lwd  345 (393)
T 4gq1_A          310 -------------------------------------------QGISLFPSLLG-ACPHPRYMDYFATAHSQHGLIQLIN  345 (393)
T ss_dssp             -------------------------------------------EEECSSCCSSC-CEECSSCTTEEEEEETTTTEEEEEE
T ss_pred             -------------------------------------------ccccccCccee-EEEccCCCCEEEEEECCCCEEEEEE
Confidence                                                       00111111122 23333  455778889999999999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ..+++.+..+.+|..+|.+++|||||++||+++.|| +.+|.+.
T Consensus       346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             TTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            999988888888989999999999999999998765 6666653

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.4e-33  Score=300.13  Aligned_cols=247  Identities=25%  Similarity=0.423  Sum_probs=201.0

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEcCC--CCeEEEEeeCCeEEEEE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWSPD--SKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s~d--g~~l~sgs~dg~i~vwd  277 (573)
                      .+.||.+.|++++|+|+|++|++|+.||+|+|||+.  ++..+..+.+|.+.|.+++|+|+  +++|++|+.||.|++||
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd   83 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   83 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence            467999999999999999999999999999999998  45667788999999999999988  89999999999999998


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC--c-EEE
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS--G-LIY  354 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~  354 (573)
                      +.+++..                                              ....+.+|...|.+++|+++  + .++
T Consensus        84 ~~~~~~~----------------------------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~  117 (753)
T 3jro_A           84 EENGRWS----------------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLL  117 (753)
T ss_dssp             EETTEEE----------------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred             CCCCccc----------------------------------------------ccccccCCCCCeEEEEECCCCCCCEEE
Confidence            7654310                                              12234456777778877764  3 566


Q ss_pred             EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      +|+.|++|++||++++..                                                              
T Consensus       118 sgs~dg~I~vwdl~~~~~--------------------------------------------------------------  135 (753)
T 3jro_A          118 VASSDGKVSVVEFKENGT--------------------------------------------------------------  135 (753)
T ss_dssp             EEETTSEEEEEECCSSSC--------------------------------------------------------------
T ss_pred             EEeCCCcEEEEEeecCCC--------------------------------------------------------------
Confidence            666777777776553211                                                              


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-------------CCCEEEEeeCCCcEEEEeCCCC----eEEEe
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-------------DGRIIASASFDKSIKLWDGRIG----KFITT  497 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-------------~g~~las~s~dg~i~lwd~~~~----~~~~~  497 (573)
                                      .....+.+|...|.+++|+|             ++.++++|+.||.|++||.+++    .....
T Consensus       136 ----------------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~  199 (753)
T 3jro_A          136 ----------------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST  199 (753)
T ss_dssp             ----------------CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred             ----------------cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee
Confidence                            11223456778899999999             5899999999999999998876    56678


Q ss_pred             ecCCcceEEEEEECCC---CCEEEEEeCCCcEEEEeCCccc-----ccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         498 LRGHVQAVYMVAWSSD---SRLLVSGSADSTLKVWNMKTKK-----IEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~d---g~~las~s~D~~v~vwd~~~~~-----~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      +.+|...|++++|+|+   +++|++++.||.|++||+.+++     ......+|.+.|++++|+|++++|++++.||.|+
T Consensus       200 ~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~  279 (753)
T 3jro_A          200 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVT  279 (753)
T ss_dssp             ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEE
T ss_pred             ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEE
Confidence            8899999999999999   8999999999999999998864     3444567889999999999999999999999999


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      +|+
T Consensus       280 vwd  282 (753)
T 3jro_A          280 LWK  282 (753)
T ss_dssp             CCB
T ss_pred             EEe
Confidence            997

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=1.3e-30  Score=264.84  Aligned_cols=300  Identities=12%  Similarity=0.133  Sum_probs=238.1

Q ss_pred             EeCCCeEEEEECC--CC--eeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc----cccCCcccEE
Q psy2671         225 GSGDTTVRFWDVT--TQ--TPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ----PMRGHKQWIT  296 (573)
Q Consensus       225 ~s~d~~i~iwd~~--~~--~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~----~~~~h~~~v~  296 (573)
                      ++.++.++||.+.  ++  +.+..+..+. .+.+++|+|++..+++++.++.|++||+.+++....    .+.+|...|.
T Consensus        95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~  173 (433)
T 3bws_A           95 KPEELNEKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE  173 (433)
T ss_dssp             SGGGGTTCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred             ccCCCceEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee
Confidence            3445544555543  34  4455555554 456999999777888888899999999998876532    3457888999


Q ss_pred             EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeE
Q psy2671         297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~  374 (573)
                      ++.|.|     +++.+++++.|+.|++||+.+++....+..|...+.+++|++++ .+ ++++.|+.|++||++++....
T Consensus       174 ~~~~~~-----~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~  248 (433)
T 3bws_A          174 TISIPE-----HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR  248 (433)
T ss_dssp             EEEEGG-----GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             EEEEcC-----CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence            999865     56789999999999999999999988888999999999999876 45 455589999999999988877


Q ss_pred             eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe--------CCCeEEEEcC
Q psy2671         375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS--------DDFTLFLWNP  446 (573)
Q Consensus       375 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~--------~dg~i~lwd~  446 (573)
                      .+..+.. +..++++                                     |++..+++++        .|+.|++||+
T Consensus       249 ~~~~~~~-~~~~~~~-------------------------------------~~g~~l~~~~~~~~~~~~~dg~i~~~d~  290 (433)
T 3bws_A          249 KTDKIGL-PRGLLLS-------------------------------------KDGKELYIAQFSASNQESGGGRLGIYSM  290 (433)
T ss_dssp             ECCCCSE-EEEEEEC-------------------------------------TTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred             EecCCCC-ceEEEEc-------------------------------------CCCCEEEEEECCCCccccCCCeEEEEEC
Confidence            7665432 4445444                                     5577777777        5899999999


Q ss_pred             CCCccceeeeccccccEEEEEECCCCCE-EEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC---
Q psy2671         447 EKEKKSLARMTGHQQLINCVEFSPDGRI-IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA---  522 (573)
Q Consensus       447 ~~~~~~~~~~~~h~~~v~~v~~sp~g~~-las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~---  522 (573)
                      .+.+.  .....|...+.+++|+|+++. +++++.|+.|++||..+++.+..+. +...+.+++|+|+|++|++++.   
T Consensus       291 ~~~~~--~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~  367 (433)
T 3bws_A          291 DKEKL--IDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPN  367 (433)
T ss_dssp             TTTEE--EEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCC
T ss_pred             CCCcE--EeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCC
Confidence            86543  223355667899999999975 5667899999999999998887776 5577899999999999988876   


Q ss_pred             ------------CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeC-CCcEEEcc
Q psy2671         523 ------------DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGK-DKVLRLWQ  572 (573)
Q Consensus       523 ------------D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~-d~~i~iw~  572 (573)
                                  ||.|++||+.+++.+..+.+ ...+.+++|+||+++|++++. |+.|++|+
T Consensus       368 ~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~  429 (433)
T 3bws_A          368 HPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYR  429 (433)
T ss_dssp             CTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred             ccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence                        57999999999988877776 457999999999999998875 99999996

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=6.7e-32  Score=266.29  Aligned_cols=279  Identities=13%  Similarity=0.144  Sum_probs=210.7

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECCC
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSST  280 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~~  280 (573)
                      +..+|.+.|.+++|+|||++||+|+.| .++|||+.+++.......+  .+..+++.++++.+ ++++.|++|++||..+
T Consensus        14 ~~~~h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~   90 (355)
T 3vu4_A           14 PENHVSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK   90 (355)
T ss_dssp             -----CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred             ccccCCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence            456899999999999999999998876 4789999887766554332  47788899988877 5688889999999999


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC-eEEEEecCCCccEEEEEECCCcEEEE--Ee
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS-QCVRVLTSHTRSVTCIRWGGSGLIYS--AS  357 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~s--~s  357 (573)
                      ++.+...  .+...|.++.+.+.       .++.+ .|+.|++||+... +.+..+..   ....+++++ ..++.  |+
T Consensus        91 ~~~~~~~--~~~~~v~~v~~~~~-------~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~  156 (355)
T 3vu4_A           91 KQDVSRI--KVDAPVKDLFLSRE-------FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEF  156 (355)
T ss_dssp             TEEEEEE--ECSSCEEEEEECSS-------EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESS
T ss_pred             CcEEEEE--ECCCceEEEEEcCC-------EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCC
Confidence            8876432  35668999988652       34443 4789999999887 55554443   333344455 44444  68


Q ss_pred             CCCeEEEEeCCCCe----------------eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         358 QDRTIKVWRASDGV----------------MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       358 ~d~~i~vw~~~~~~----------------~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .||.|++||+.++.                ....+.+|...|.+++++                                
T Consensus       157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s--------------------------------  204 (355)
T 3vu4_A          157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN--------------------------------  204 (355)
T ss_dssp             CTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC--------------------------------
T ss_pred             cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC--------------------------------
Confidence            99999999998765                267788999999888877                                


Q ss_pred             eeeeCCCCcEEEEEeCCCe-EEEEcCCCCccceeeec-c-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EE
Q psy2671         422 YQAQCPEGEKLVSGSDDFT-LFLWNPEKEKKSLARMT-G-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--IT  496 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~-i~lwd~~~~~~~~~~~~-~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~  496 (573)
                           |++.+|++|+.|++ |++||++++.. +..+. + |...|.+++|+|+|++|++++.|++|++||++.+..  ..
T Consensus       205 -----~~g~~l~s~s~d~~~v~iwd~~~~~~-~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~  278 (355)
T 3vu4_A          205 -----RKSDMVATCSQDGTIIRVFKTEDGVL-VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRH  278 (355)
T ss_dssp             -----TTSSEEEEEETTCSEEEEEETTTCCE-EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSE
T ss_pred             -----CCCCEEEEEeCCCCEEEEEECCCCcE-EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccc
Confidence                 55889999999998 99999987654 44555 5 999999999999999999999999999999876431  11


Q ss_pred             eecC---------------------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         497 TLRG---------------------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       497 ~~~~---------------------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      .+.+                     +......++|++||++|++++.||.+++|++..++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          279 ALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             ETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             cccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence            1111                     11223568999999999999999999999986543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=7.6e-32  Score=253.58  Aligned_cols=257  Identities=15%  Similarity=0.131  Sum_probs=185.2

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC----CCeEEEEeeCCeEEEE
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD----SKQLVSGCKNGVIHAW  276 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d----g~~l~sgs~dg~i~vw  276 (573)
                      +++.+|..+|..+.|.||...|++....                 .-+...|++++|+||    ++.+++++.+  +++|
T Consensus        80 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~  140 (356)
T 2w18_A           80 YTWHFAEVPVLQIVPVPDVYNLVCVALG-----------------NLEIREIRALFCSSDDESEKQVLLKSGNI--KAVL  140 (356)
T ss_dssp             EEEECCSSCEEEECCCTTCCSCEEEEEC-----------------SSSEEEEEEECC------CCEEEEEEEEE--EEEE
T ss_pred             EEEeccCceeEEEEEcCcccceeeeeec-----------------cccccceEEEEECCCccccccEEEeCCCe--EEEE
Confidence            4456899999999999997766543221                 123456899999999    9999998854  7888


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe--CCCcEEEEEC-CCCeEEEEecCCCccEEEEEECC---C
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG--KDGAIRIWDV-ILSQCVRVLTSHTRSVTCIRWGG---S  350 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~--~dg~v~iwd~-~~~~~~~~~~~h~~~v~~~~~~~---~  350 (573)
                      ++.+++                            .+.+++  .|+.|++|++ ..++.+..+.+|...+..++|++   +
T Consensus       141 ~l~~g~----------------------------lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~  192 (356)
T 2w18_A          141 GLTKRR----------------------------LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM  192 (356)
T ss_dssp             EETTTE----------------------------EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred             ecCCCc----------------------------EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence            764332                            233322  5899999999 55778888888998888888876   3


Q ss_pred             c-EEEEEeCCCeEEEEeCCCCeeeEeccCCcc---eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeC
Q psy2671         351 G-LIYSASQDRTIKVWRASDGVMCRTLEGHAH---WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC  426 (573)
Q Consensus       351 ~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  426 (573)
                      + .+++++.|++|++||+++|+.++++.+|..   .+..++++++....+.....                         
T Consensus       193 ~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~-------------------------  247 (356)
T 2w18_A          193 QEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP-------------------------  247 (356)
T ss_dssp             TTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC---------------------------
T ss_pred             CceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccC-------------------------
Confidence            3 799999999999999999999999987543   45666788876544332210                         


Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceee----eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLAR----MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~----~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                      .....+++|+.|+++++||+.+++.....    ..+|...+.+..++  +.++|+|+.|++|+|||+.+++++.++.+|.
T Consensus       248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~  325 (356)
T 2w18_A          248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVS  325 (356)
T ss_dssp             ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC-
T ss_pred             CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCC
Confidence            01235789999999999999876532111    14666554444443  7899999999999999999999999999998


Q ss_pred             ceEE-EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         503 QAVY-MVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       503 ~~v~-~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      ..+. +++|||||++||+|+.|++|||||+
T Consensus       326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             -CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            7665 5899999999999999999999985

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3.1e-32  Score=276.22  Aligned_cols=249  Identities=22%  Similarity=0.461  Sum_probs=205.4

Q ss_pred             CCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCC----------CeeeEEecCCCCcEEEEEEcCCCC-eEEEEeeCC
Q psy2671         204 PGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTT----------QTPLFKCEGHKHWVLCIAWSPDSK-QLVSGCKNG  271 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~----------~~~~~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg  271 (573)
                      .+|.+.|++++|+|+ +.+||+++.||.|++||+.+          ..++..+.+|...|.+++|+|++. +|++|+.||
T Consensus       125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg  204 (430)
T 2xyi_A          125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH  204 (430)
T ss_dssp             EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred             EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence            468999999999997 77999999999999999976          567788899999999999999998 999999999


Q ss_pred             eEEEEECCCCcee------cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC---eEEEEecCCCccE
Q psy2671         272 VIHAWDSSTGKQI------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS---QCVRVLTSHTRSV  342 (573)
Q Consensus       272 ~i~vwd~~~~~~~------~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~---~~~~~~~~h~~~v  342 (573)
                      .|++|++..+...      ...+.+|...|.+++|.|.    .+..|++++.||.|++||+...   .....+..|...|
T Consensus       205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~----~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v  280 (430)
T 2xyi_A          205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL----HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV  280 (430)
T ss_dssp             CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS----CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred             eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC----CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence            9999999874321      2345689999999999873    3568999999999999999876   4556667788888


Q ss_pred             EEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         343 TCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       343 ~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      .+++|++++  .+++|+.|++|++||+                                                     
T Consensus       281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~-----------------------------------------------------  307 (430)
T 2xyi_A          281 NCLSFNPYSEFILATGSADKTVALWDL-----------------------------------------------------  307 (430)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEET-----------------------------------------------------
T ss_pred             EEEEeCCCCCCEEEEEeCCCeEEEEeC-----------------------------------------------------
Confidence            888877643  3445555555555554                                                     


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCC--------
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRI--------  491 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~--------  491 (573)
                                                +.....+..+.+|...|.+++|+|+++ +|++++.||.|++||+..        
T Consensus       308 --------------------------~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  361 (430)
T 2xyi_A          308 --------------------------RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE  361 (430)
T ss_dssp             --------------------------TCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH
T ss_pred             --------------------------CCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc
Confidence                                      433334555667888999999999985 799999999999999876        


Q ss_pred             ------CeEEEeecCCcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCccc
Q psy2671         492 ------GKFITTLRGHVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       492 ------~~~~~~~~~h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~  535 (573)
                            .+.+..+.+|...|++++|+|+++ +|++++.|+.|++|++....
T Consensus       362 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~  412 (430)
T 2xyi_A          362 DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV  412 (430)
T ss_dssp             HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred             ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence                  367788889999999999999999 89999999999999997643

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.1e-31  Score=272.14  Aligned_cols=246  Identities=23%  Similarity=0.431  Sum_probs=210.4

Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC----------CeEEEEecCCCccEEEEEECCCc--EEE
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL----------SQCVRVLTSHTRSVTCIRWGGSG--LIY  354 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~--~l~  354 (573)
                      ...+|...|.+++|.|.    .+.++++++.||.|++|++..          ..+...+.+|...|.+++|++++  .++
T Consensus       123 ~~~~h~~~v~~l~~~p~----~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~  198 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQ----NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL  198 (430)
T ss_dssp             EEEEESSCCSEEEEETT----EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred             EEEcCCCcEEEEEECCC----CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence            34578889999999873    246899999999999999976          56677888999999999998764  799


Q ss_pred             EEeCCCeEEEEeCCCCee-------eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC
Q psy2671         355 SASQDRTIKVWRASDGVM-------CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP  427 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~-------~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  427 (573)
                      +|+.||+|++|++..+..       ...+.+|...|..++++++                                    
T Consensus       199 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~------------------------------------  242 (430)
T 2xyi_A          199 SASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL------------------------------------  242 (430)
T ss_dssp             EECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS------------------------------------
T ss_pred             EEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC------------------------------------
Confidence            999999999999987422       3456678888888777642                                    


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCc--cceeeeccccccEEEEEECCCCC-EEEEeeCCCcEEEEeCCC-CeEEEeecCCcc
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEK--KSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLWDGRI-GKFITTLRGHVQ  503 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~--~~~~~~~~h~~~v~~v~~sp~g~-~las~s~dg~i~lwd~~~-~~~~~~~~~h~~  503 (573)
                      ++.++++++.|+.|++||++...  .....+..|...|++++|+|++. ++++|+.||.|++||.++ ...+..+.+|..
T Consensus       243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~  322 (430)
T 2xyi_A          243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD  322 (430)
T ss_dssp             CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS
T ss_pred             CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC
Confidence            36789999999999999998763  45566778999999999999987 799999999999999998 566788889999


Q ss_pred             eEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--------------ccccccccCcCCCEEEEEEccCCC-EEEEeeCCCc
Q psy2671         504 AVYMVAWSSDSR-LLVSGSADSTLKVWNMKT--------------KKIEQDLPGHGDEVYAVDWAPDGE-KVASGGKDKV  567 (573)
Q Consensus       504 ~v~~v~~s~dg~-~las~s~D~~v~vwd~~~--------------~~~~~~l~~h~~~v~~~~~s~d~~-~l~s~~~d~~  567 (573)
                      .|++++|+|+++ +|++++.|+.|++||+..              .+.+..+.+|.+.|++++|+|+++ .|++++.|+.
T Consensus       323 ~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~  402 (430)
T 2xyi_A          323 EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI  402 (430)
T ss_dssp             CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred             CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence            999999999995 699999999999999977              245567788999999999999999 8999999999


Q ss_pred             EEEcc
Q psy2671         568 LRLWQ  572 (573)
Q Consensus       568 i~iw~  572 (573)
                      |++|+
T Consensus       403 i~iw~  407 (430)
T 2xyi_A          403 MQVWQ  407 (430)
T ss_dssp             EEEEE
T ss_pred             EEEeE
Confidence            99996

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=8.1e-30  Score=255.27  Aligned_cols=329  Identities=15%  Similarity=0.190  Sum_probs=246.9

Q ss_pred             CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671         123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS  202 (573)
Q Consensus       123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (573)
                      .++++++.|++|++||+.+++++..                                                       
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~-------------------------------------------------------   27 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTAT-------------------------------------------------------   27 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEE-------------------------------------------------------
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEE-------------------------------------------------------
Confidence            4688999999999999988754321                                                       


Q ss_pred             CCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCC
Q psy2671         203 MPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSST  280 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~  280 (573)
                      +.+| ..+.+++|+|+|+++ ++++.|++|++||+.+++.+..+..+. .+.+++|+|++++|+. ++.++.|++||+.+
T Consensus        28 ~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~  105 (391)
T 1l0q_A           28 IPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS  105 (391)
T ss_dssp             EECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             eecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCC
Confidence            1234 348999999999987 677799999999999999888777665 8999999999998865 45679999999998


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEe
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSAS  357 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s  357 (573)
                      ++.+.. +.. ...+.+++|.|     +++.+ ++++.++.|++||+.+++....+..|. .+.+++|++++ .+ ++++
T Consensus       106 ~~~~~~-~~~-~~~~~~~~~s~-----dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~  177 (391)
T 1l0q_A          106 NTVAGT-VKT-GKSPLGLALSP-----DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANF  177 (391)
T ss_dssp             TEEEEE-EEC-SSSEEEEEECT-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEET
T ss_pred             CeEEEE-EeC-CCCcceEEECC-----CCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeC
Confidence            876533 233 34578888876     45656 788889999999999999888877664 46899999887 44 6778


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-  436 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-  436 (573)
                      .++.|++||++++.....+..+ ..+..++++                                     |++.++++++ 
T Consensus       178 ~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~-------------------------------------~~g~~l~~~~~  219 (391)
T 1l0q_A          178 DSMSISVIDTVTNSVIDTVKVE-AAPSGIAVN-------------------------------------PEGTKAYVTNV  219 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEECS-SEEEEEEEC-------------------------------------TTSSEEEEEEE
T ss_pred             CCCEEEEEECCCCeEEEEEecC-CCccceEEC-------------------------------------CCCCEEEEEec
Confidence            8999999999988776655432 334444443                                     5677788777 


Q ss_pred             --CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCeEEEeecCCcceEE---EEEE
Q psy2671         437 --DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGRIGKFITTLRGHVQAVY---MVAW  510 (573)
Q Consensus       437 --~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~~~~~~~~~~h~~~v~---~v~~  510 (573)
                        .++.|++||+.+.. .+..+..|. .+.+++|+|+|++| ++++.|+.|++||..+++.+..+..|..+..   .+.+
T Consensus       220 ~~~~~~v~~~d~~~~~-~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~  297 (391)
T 1l0q_A          220 DKYFNTVSMIDTGTNK-ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGS  297 (391)
T ss_dssp             CSSCCEEEEEETTTTE-EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEE
T ss_pred             CcCCCcEEEEECCCCe-EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeec
Confidence              68999999998754 344555554 47899999999977 6778899999999999998888876654421   1222


Q ss_pred             CC------------CC----------CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEe
Q psy2671         511 SS------------DS----------RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       511 s~------------dg----------~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      .|            +.          ..+...+.|.++++|++..+...    .+..+  ...|+++|.|.++.
T Consensus       298 ~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~~--~~~~~~~g~y~~~~  365 (391)
T 1l0q_A          298 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQNP--THTYSETGIYTVRL  365 (391)
T ss_dssp             CSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----CSSSC--EECCSSCEEEEEEE
T ss_pred             ccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----CcCCC--eEEeCCCceEEEEE
Confidence            22            11          24566677889999999876542    22233  35789998887643

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=3.4e-30  Score=261.71  Aligned_cols=277  Identities=16%  Similarity=0.142  Sum_probs=223.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE-----EecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF-----KCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~-----~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      .+.+++|+|++.++++++.|++|++||+.+++.+.     .+.+|...|.+++|+|+++.+++++.|+.|++||+++++.
T Consensus       124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~  203 (433)
T 3bws_A          124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY  203 (433)
T ss_dssp             CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred             CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE
Confidence            45589999987788888889999999999988776     3458999999999999999999999999999999998876


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe----
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS----  357 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s----  357 (573)
                      +. .+..|...+.+++|.|     +++.+ ++++.|+.|++||+.+++.+..+..+ ..+.+++|++++ .+++++    
T Consensus       204 ~~-~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~  276 (433)
T 3bws_A          204 KA-TVDLTGKWSKILLYDP-----IRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSAS  276 (433)
T ss_dssp             EE-EEECSSSSEEEEEEET-----TTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESC
T ss_pred             EE-EEcCCCCCeeEEEEcC-----CCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCC
Confidence            53 3457888899999876     45556 55568999999999999888877665 458999999887 677777    


Q ss_pred             ----CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EE
Q psy2671         358 ----QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KL  432 (573)
Q Consensus       358 ----~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l  432 (573)
                          .|+.|++||+.++.....+ .|...+..++++                                     |+++ .+
T Consensus       277 ~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~-------------------------------------~~g~~l~  318 (433)
T 3bws_A          277 NQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSG-------------------------------------NTENKIY  318 (433)
T ss_dssp             TTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEEC-------------------------------------SSTTEEE
T ss_pred             ccccCCCeEEEEECCCCcEEeec-cCCCCcceEEEC-------------------------------------CCCCEEE
Confidence                5889999999988765543 222333444433                                     5565 55


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---------------CCcEEEEeCCCCeEEEe
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---------------DKSIKLWDGRIGKFITT  497 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---------------dg~i~lwd~~~~~~~~~  497 (573)
                      ++++.|+.+++||+.+... ...+ .+...+.+++|+|+|+++++++.               ||.|++||..+++.+..
T Consensus       319 ~~~~~~~~v~v~d~~~~~~-~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~  396 (433)
T 3bws_A          319 VSDMCCSKIEVYDLKEKKV-QKSI-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF  396 (433)
T ss_dssp             EEETTTTEEEEEETTTTEE-EEEE-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred             EEecCCCEEEEEECCCCcE-EEEe-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence            7778999999999986543 3333 35677999999999999888876               57999999999998888


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeC-CCcEEEEeCCc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKT  533 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~  533 (573)
                      +..+ ..+.+++|+|||++|++++. |+.|++|+++.
T Consensus       397 ~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~  432 (433)
T 3bws_A          397 WEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG  432 (433)
T ss_dssp             EECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred             ecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence            8764 57899999999999988875 99999999863

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.3e-32  Score=264.61  Aligned_cols=268  Identities=9%  Similarity=0.014  Sum_probs=202.6

Q ss_pred             EEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeec
Q psy2671         117 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV  196 (573)
Q Consensus       117 ~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (573)
                      .+.+++++||||+.||+|++||+.+++++....                                               
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----------------------------------------------   75 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----------------------------------------------   75 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----------------------------------------------
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----------------------------------------------
Confidence            445688999999999999999999886543211                                               


Q ss_pred             cccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC---------CCeeeEEe-cCCCCcEEEEEEcC--CCCeE
Q psy2671         197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT---------TQTPLFKC-EGHKHWVLCIAWSP--DSKQL  264 (573)
Q Consensus       197 ~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~---------~~~~~~~~-~~h~~~V~~v~~s~--dg~~l  264 (573)
                                ...|.++.|+|+   +++++.|++|++|+..         +++.+... .+|...|.+++|+|  ++++|
T Consensus        76 ----------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l  142 (343)
T 3lrv_A           76 ----------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYF  142 (343)
T ss_dssp             ----------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEE
T ss_pred             ----------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEE
Confidence                      123455667777   8999999999999765         44434333 36778999999999  99999


Q ss_pred             EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE-EEecC-CCccE
Q psy2671         265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV-RVLTS-HTRSV  342 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~-h~~~v  342 (573)
                      ++|+.||+|++||+++++........|...+.+++|.|     ++.++++|+.||.|++||+.+++.. ..+.. |...|
T Consensus       143 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p-----dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v  217 (343)
T 3lrv_A          143 IWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK-----DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI  217 (343)
T ss_dssp             EEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT-----TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE
T ss_pred             EEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC-----CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE
Confidence            99999999999999998875433345666799999876     5789999999999999999998877 67777 99999


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .+++|++++ .+++++ |++|++||++++.....+..+                                          
T Consensus       218 ~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~------------------------------------------  254 (343)
T 3lrv_A          218 KEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY------------------------------------------  254 (343)
T ss_dssp             EEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC------------------------------------------
T ss_pred             EEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc------------------------------------------
Confidence            999999877 567777 458888888765432222110                                          


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccE--EEEEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEee
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--NCVEFSPDGRIIASASF-DKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v--~~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~  498 (573)
                                                         ..|...+  .+++|+|+|++|++++. |+.|++|+..........
T Consensus       255 -----------------------------------~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~  299 (343)
T 3lrv_A          255 -----------------------------------TIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK  299 (343)
T ss_dssp             -----------------------------------BC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE
T ss_pred             -----------------------------------ccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe
Confidence                                               0011111  57999999999999998 999999998655432222


Q ss_pred             cCCcceEEEEEECC---CCCEEEEEeCCCcEEEEeC
Q psy2671         499 RGHVQAVYMVAWSS---DSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       499 ~~h~~~v~~v~~s~---dg~~las~s~D~~v~vwd~  531 (573)
                          .++..++|++   +.+.+++++.|+.++++-.
T Consensus       300 ----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~  331 (343)
T 3lrv_A          300 ----DEESALCLQSDTADFTDMDVVCGDGGIAAILK  331 (343)
T ss_dssp             ----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred             ----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence                5677889998   8999999999999998753

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=100.00  E-value=1.6e-30  Score=292.41  Aligned_cols=360  Identities=13%  Similarity=0.115  Sum_probs=262.6

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCC------CcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCc
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGD------TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNT  177 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D------~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (573)
                      ..+.+|...|.+++|||||++||+++.+      ..|.+||+.++...                                
T Consensus        46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~--------------------------------   93 (1045)
T 1k32_A           46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK--------------------------------   93 (1045)
T ss_dssp             EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE--------------------------------
T ss_pred             EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeE--------------------------------
Confidence            3456799999999999999999988653      47999998876421                                


Q ss_pred             cceEEEEEeceeeEEEeeccccccCCCCCCCcE-------EEEEEcCCCCeEEEEeCC------CeEEEEECCCCe----
Q psy2671         178 EEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV-------ISVKFSPNGRSLASGSGD------TTVRFWDVTTQT----  240 (573)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V-------~~~~fsp~g~~las~s~d------~~i~iwd~~~~~----  240 (573)
                                              .+.+|...+       .+++|||||+.+++++.+      ..|.+|++.++.    
T Consensus        94 ------------------------~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l  149 (1045)
T 1k32_A           94 ------------------------RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL  149 (1045)
T ss_dssp             ------------------------ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC
T ss_pred             ------------------------EcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEe
Confidence                                    122344444       566666666644555433      235555543332    


Q ss_pred             ---------------------------------------------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEE
Q psy2671         241 ---------------------------------------------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHA  275 (573)
Q Consensus       241 ---------------------------------------------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~v  275 (573)
                                                                   ....+.+|...+.++.|+++ ..+++++.|+.+.+
T Consensus       150 ~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l  228 (1045)
T 1k32_A          150 NLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQI  228 (1045)
T ss_dssp             CSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEE
T ss_pred             cCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEE
Confidence                                                         12233567888899999988 56677788899999


Q ss_pred             EECCC-CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-----------CCccEE
Q psy2671         276 WDSST-GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-----------HTRSVT  343 (573)
Q Consensus       276 wd~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-----------h~~~v~  343 (573)
                      |.+.. +... ..+..|.. +....|+|     +++.++.+ .++.|++|++.... +..+..           |...+.
T Consensus       229 ~~~~~~g~~~-~~l~~~~~-~~~~~~Sp-----DG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~  299 (1045)
T 1k32_A          229 YSTDLDGKDL-RKHTSFTD-YYPRHLNT-----DGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKF  299 (1045)
T ss_dssp             EEEETTSCSC-EECCCCCS-SCEEEEEE-----SSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGG
T ss_pred             EEEeCCCCcc-eEecCCCC-cceeeEcC-----CCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccc
Confidence            97653 2222 23334442 34456655     67778776 58999999985443 335444           344688


Q ss_pred             EEEEC-CCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         344 CIRWG-GSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       344 ~~~~~-~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      +++|+ +++ .+++++ ++.+.+|+...+.... +..|.. .+..++++                               
T Consensus       300 ~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s-------------------------------  346 (1045)
T 1k32_A          300 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD-------------------------------  346 (1045)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-------------------------------
T ss_pred             eeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-------------------------------
Confidence            99999 988 466665 8899999988775433 444444 44444433                               


Q ss_pred             heeeeCCCCcEEEEEeCCCeEE-EEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLF-LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~-lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                             +|+.++.++.++.+. +|+.....  ...+.+|...+..++|||||++||+++.++.|++||+.+++....+.
T Consensus       347 -------dg~~l~~~s~~~~l~~~~d~~~~~--~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~  417 (1045)
T 1k32_A          347 -------TKVAFIHGTREGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER  417 (1045)
T ss_dssp             -------SEEEEEEEETTEEEEEEEETTTCC--EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             -------CCCeEEEEECCCceEEEEECCCCC--ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence                   366788888888888 99987643  23344777889999999999999999999999999999998887777


Q ss_pred             CCcceEEEEEECCCCCEEEEEeCCC----------cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEE
Q psy2671         500 GHVQAVYMVAWSSDSRLLVSGSADS----------TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLR  569 (573)
Q Consensus       500 ~h~~~v~~v~~s~dg~~las~s~D~----------~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~  569 (573)
                      +|...+..++|||||++||+++.++          .|++||+.+++ ...+..|...+.++.|+|||++|++++.++..+
T Consensus       418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~  496 (1045)
T 1k32_A          418 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDP  496 (1045)
T ss_dssp             CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCC
T ss_pred             CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCc
Confidence            8888899999999999999887654          89999999887 567778888899999999999999999887766


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      +|+
T Consensus       497 ~~~  499 (1045)
T 1k32_A          497 SPD  499 (1045)
T ss_dssp             EEC
T ss_pred             Ccc
Confidence            664

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=1.3e-29  Score=253.84  Aligned_cols=302  Identities=14%  Similarity=0.191  Sum_probs=235.4

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEECCCCceecccccCCcccEEEEE
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALS  299 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~  299 (573)
                      .+++++.|++|++||+.+++.+..+.+|.. +.+++|+|+|++| ++++.|+.|++||+.+++.+.. +..+. .+.+++
T Consensus         4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~-~~~~~-~v~~~~   80 (391)
T 1l0q_A            4 AYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT-VPAGS-SPQGVA   80 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE-EECSS-SEEEEE
T ss_pred             EEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEE-EECCC-CccceE
Confidence            578899999999999999998888887764 8999999999987 6777999999999998876543 33333 789999


Q ss_pred             ecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EE-EEEeCCCeEEEEeCCCCeeeEec
Q psy2671         300 WEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LI-YSASQDRTIKVWRASDGVMCRTL  376 (573)
Q Consensus       300 ~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l-~s~s~d~~i~vw~~~~~~~~~~~  376 (573)
                      |.|     +++++ ++++.++.|++||+.+++....+..|. .+.+++|++++ .+ ++++.|+.|++||+.++.....+
T Consensus        81 ~sp-----dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~  154 (391)
T 1l0q_A           81 VSP-----DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV  154 (391)
T ss_dssp             ECT-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             ECC-----CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence            876     45666 455577999999999998888776554 67999999887 34 68888999999999998877766


Q ss_pred             cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCCCCccceee
Q psy2671         377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       377 ~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                      ..+.. +..++++                                     |++..+ ++++.++.|++||+++... ...
T Consensus       155 ~~~~~-~~~~~~~-------------------------------------~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~  195 (391)
T 1l0q_A          155 SVGRS-PKGIAVT-------------------------------------PDGTKVYVANFDSMSISVIDTVTNSV-IDT  195 (391)
T ss_dssp             ECCSS-EEEEEEC-------------------------------------TTSSEEEEEETTTTEEEEEETTTTEE-EEE
T ss_pred             ecCCC-cceEEEC-------------------------------------CCCCEEEEEeCCCCEEEEEECCCCeE-EEE
Confidence            65432 3444443                                     556666 6778899999999987542 223


Q ss_pred             eccccccEEEEEECCCCCEEEEee---CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE-EEEeCCCcEEEEeC
Q psy2671         456 MTGHQQLINCVEFSPDGRIIASAS---FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL-VSGSADSTLKVWNM  531 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~g~~las~s---~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l-as~s~D~~v~vwd~  531 (573)
                      + .+...+.+++|+|+|++|++++   .++.|++||.++++.+..+..|. .+.+++|+|+|++| ++++.|+.|++||+
T Consensus       196 ~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~  273 (391)
T 1l0q_A          196 V-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDT  273 (391)
T ss_dssp             E-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred             E-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence            3 3456789999999999999888   68999999999999888888775 47899999999987 67788999999999


Q ss_pred             CcccccccccCcCCCEE---------------EEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671         532 KTKKIEQDLPGHGDEVY---------------AVDWAPDG----------EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       532 ~~~~~~~~l~~h~~~v~---------------~~~~s~d~----------~~l~s~~~d~~i~iw~  572 (573)
                      .+++.+..+..|..+..               ...|+.+.          ..+...+.|.++++|+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~  339 (391)
T 1l0q_A          274 ATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD  339 (391)
T ss_dssp             TTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred             CCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEE
Confidence            99888777765544321               11233321          3466677788899996

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=99.98  E-value=7.5e-31  Score=252.17  Aligned_cols=205  Identities=25%  Similarity=0.414  Sum_probs=178.3

Q ss_pred             EEecCCCccEEEEEECCCc-EEEEEeCCCeEEEEeCCC--CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         333 RVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASD--GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      ..+.+|...|.+++|++++ .|++|+.|++|++|++..  +....++.+|...|.+++++++                  
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~------------------   64 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP------------------   64 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG------------------
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC------------------
Confidence            4567899999999999887 799999999999999874  3667889999999999988632                  


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc-cceeeeccccccEEEEEECCC--CCEEEEeeCCCcEEE
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-KSLARMTGHQQLINCVEFSPD--GRIIASASFDKSIKL  486 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~-~~~~~~~~h~~~v~~v~~sp~--g~~las~s~dg~i~l  486 (573)
                                       ..+.+|++|+.|++|++||++++. ..+..+.+|...|.+++|+|+  |.+|++|+.||+|++
T Consensus        65 -----------------~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~  127 (297)
T 2pm7_B           65 -----------------KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV  127 (297)
T ss_dssp             -----------------GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred             -----------------CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence                             136789999999999999998654 345567789999999999997  899999999999999


Q ss_pred             EeCCCCe--EEEeecCCcceEEEEEECCC-------------CCEEEEEeCCCcEEEEeCCccc----ccccccCcCCCE
Q psy2671         487 WDGRIGK--FITTLRGHVQAVYMVAWSSD-------------SRLLVSGSADSTLKVWNMKTKK----IEQDLPGHGDEV  547 (573)
Q Consensus       487 wd~~~~~--~~~~~~~h~~~v~~v~~s~d-------------g~~las~s~D~~v~vwd~~~~~----~~~~l~~h~~~v  547 (573)
                      ||.+++.  ....+.+|...|.+++|+|+             +++||+|+.|++|++||+++++    ....+.+|.+.|
T Consensus       128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V  207 (297)
T 2pm7_B          128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV  207 (297)
T ss_dssp             EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred             EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence            9998763  24567899999999999997             5799999999999999998765    556789999999


Q ss_pred             EEEEEccCC---CEEEEeeCCCcEEEcc
Q psy2671         548 YAVDWAPDG---EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       548 ~~~~~s~d~---~~l~s~~~d~~i~iw~  572 (573)
                      .+++|+|++   ++|++++.|++|++|+
T Consensus       208 ~~v~~sp~~~~~~~las~s~D~~v~iWd  235 (297)
T 2pm7_B          208 RDVAWSPTVLLRSYMASVSQDRTCIIWT  235 (297)
T ss_dssp             EEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred             EEEEECCCCCCceEEEEEECCCcEEEEE
Confidence            999999995   8999999999999996

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.98  E-value=2.8e-29  Score=260.25  Aligned_cols=327  Identities=13%  Similarity=0.096  Sum_probs=251.3

Q ss_pred             EEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeec
Q psy2671         117 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPV  196 (573)
Q Consensus       117 ~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (573)
                      +|+|++.++++++.|++|++||..+++++..+.                                               
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~-----------------------------------------------  176 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID-----------------------------------------------  176 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE-----------------------------------------------
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe-----------------------------------------------
Confidence            378999999999999999999998876542211                                               


Q ss_pred             cccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEEC--CCCeeeEEecCCCCcEEEEEEcC----CCCeEEEEe-e
Q psy2671         197 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV--TTQTPLFKCEGHKHWVLCIAWSP----DSKQLVSGC-K  269 (573)
Q Consensus       197 ~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~--~~~~~~~~~~~h~~~V~~v~~s~----dg~~l~sgs-~  269 (573)
                             .||.  +.+++|+|||++|++++.|++|++||+  .+++.+..+.. ...+.+++|+|    ||++|++++ .
T Consensus       177 -------~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~  246 (543)
T 1nir_A          177 -------TGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYW  246 (543)
T ss_dssp             -------CSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred             -------cCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEcc
Confidence                   1343  889999999999999999999999999  78888877764 45679999999    999999988 4


Q ss_pred             CCeEEEEECCCCceeccccc-C--------Cc-ccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE--EecC
Q psy2671         270 NGVIHAWDSSTGKQIGQPMR-G--------HK-QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR--VLTS  337 (573)
Q Consensus       270 dg~i~vwd~~~~~~~~~~~~-~--------h~-~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~  337 (573)
                      +++|.+||..+++.+..... +        |. ..+.++.+.|.    ....+++...++.|.+||....+...  .+ .
T Consensus       247 ~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~----~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~  321 (543)
T 1nir_A          247 PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE----HPEFIVNVKETGKVLLVNYKDIDNLTVTSI-G  321 (543)
T ss_dssp             SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS----SSEEEEEETTTTEEEEEECTTSSSCEEEEE-E
T ss_pred             CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC----CCEEEEEECCCCeEEEEEecCCCcceeEEe-c
Confidence            89999999998876533211 1        22 26778877663    23467788889999999998755433  33 3


Q ss_pred             CCccEEEEEECCCcE-EEEE-eCCCeEEEEeCCCCeeeEeccC----CcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         338 HTRSVTCIRWGGSGL-IYSA-SQDRTIKVWRASDGVMCRTLEG----HAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       338 h~~~v~~~~~~~~~~-l~s~-s~d~~i~vw~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      +...+..+.|++++. ++++ ..+++|.+||..++++...+..    |......+                         
T Consensus       322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-------------------------  376 (543)
T 1nir_A          322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-------------------------  376 (543)
T ss_dssp             CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-------------------------
T ss_pred             cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-------------------------
Confidence            456677899998873 5544 4689999999999988776653    22111110                         


Q ss_pred             hhhhhhhhhheeeeCCC-CcEEEEEe-CCCeEEEEcCCCC------ccceeeeccccccEEEEEECCCCCEEEEee----
Q psy2671         412 EESSKHALAKYQAQCPE-GEKLVSGS-DDFTLFLWNPEKE------KKSLARMTGHQQLINCVEFSPDGRIIASAS----  479 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~-~~~l~sg~-~dg~i~lwd~~~~------~~~~~~~~~h~~~v~~v~~sp~g~~las~s----  479 (573)
                                   ..|+ +..++++. .|++|.+||+.+.      .+.+..+.+|...+..|+|+|+|+.|++++    
T Consensus       377 -------------~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~  443 (543)
T 1nir_A          377 -------------VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP  443 (543)
T ss_dssp             -------------EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred             -------------CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence                         1244 56677776 6899999998762      456778888887888999999999999987    


Q ss_pred             ---CCCcEEEEeCCCCeEE-Eee--------cCCcceEEEEEECCCCCEEEEEe-----CCCcEEEEeCCcccccccccC
Q psy2671         480 ---FDKSIKLWDGRIGKFI-TTL--------RGHVQAVYMVAWSSDSRLLVSGS-----ADSTLKVWNMKTKKIEQDLPG  542 (573)
Q Consensus       480 ---~dg~i~lwd~~~~~~~-~~~--------~~h~~~v~~v~~s~dg~~las~s-----~D~~v~vwd~~~~~~~~~l~~  542 (573)
                         .+++|.+||..+++.. ..+        ..+...+..++|+|||+.|+++.     .|+.|.|||.+++++++.++.
T Consensus       444 ~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  523 (543)
T 1nir_A          444 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD  523 (543)
T ss_dssp             SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence               3779999999988766 443        45667899999999999988763     479999999999999888875


Q ss_pred             c
Q psy2671         543 H  543 (573)
Q Consensus       543 h  543 (573)
                      +
T Consensus       524 ~  524 (543)
T 1nir_A          524 P  524 (543)
T ss_dssp             T
T ss_pred             C
Confidence            4

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.97  E-value=1.5e-28  Score=276.30  Aligned_cols=387  Identities=10%  Similarity=0.086  Sum_probs=282.3

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      +...+.+.+|||  ++||.++. +.|.+||+.+++..                                           
T Consensus        13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~~-------------------------------------------   46 (1045)
T 1k32_A           13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGSTR-------------------------------------------   46 (1045)
T ss_dssp             CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCEE-------------------------------------------
T ss_pred             ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcEE-------------------------------------------
Confidence            566889999995  57887765 68999999776421                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC------CeEEEEECCCCeeeEEecCCCCcE-------EEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD------TTVRFWDVTTQTPLFKCEGHKHWV-------LCI  255 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d------~~i~iwd~~~~~~~~~~~~h~~~V-------~~v  255 (573)
                                   .+.+|...+.+++|||||++||+++.+      ..|++||+.+++ ...+..|...+       .++
T Consensus        47 -------------~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~  112 (1045)
T 1k32_A           47 -------------KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVA  112 (1045)
T ss_dssp             -------------EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEE
T ss_pred             -------------EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccc
Confidence                         133688899999999999999988643      489999998876 56778888888       999


Q ss_pred             EEcCCCCeEEEEeeC------CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC------------
Q psy2671         256 AWSPDSKQLVSGCKN------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK------------  317 (573)
Q Consensus       256 ~~s~dg~~l~sgs~d------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------------  317 (573)
                      +|||||+.+++++.+      ..|.+|++.++...  .+..+..  ..+.|+|      + .+++++.            
T Consensus       113 ~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~--~l~~~~~--~~~~~sp------G-~l~~~~~~~~~~~~~~~~g  181 (1045)
T 1k32_A          113 GFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV--PLNLGPA--THILFAD------G-RRVIGRNTFELPHWKGYRG  181 (1045)
T ss_dssp             EECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE--ECCSCSC--SEEEEET------T-EEEEEESCSCCTTSTTCCS
T ss_pred             cCCCCCEEEEEECCcCCCcccceEEEEECCCCCeE--EecCCCc--ceeeeCC------C-EEEEeccCCCccccccccC
Confidence            999999977777754      46888888776532  1222221  2344543      4 6676642            


Q ss_pred             CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEE
Q psy2671         318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRV  396 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~  396 (573)
                      +...++|....+.....+.+|...+.++.|+++..+++++.|+++++|.+.. +.....+..|.. +...+++++....+
T Consensus       182 ~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la  260 (1045)
T 1k32_A          182 GTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRIL  260 (1045)
T ss_dssp             TTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEE
T ss_pred             CCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEE
Confidence            3445666543333445568999999999999887778888999999998653 444455555543 45667777765333


Q ss_pred             EEcCCCceeeCCCCchhhh--------------hhhhhheeeeC-CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc
Q psy2671         397 EATSTGGFKYDPANPEESS--------------KHALAKYQAQC-PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ  461 (573)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~-~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~  461 (573)
                      .........++........              .........++ |+|+.+++++ ++.+++|+.....  ...+..|..
T Consensus       261 ~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~--~~~~~~~~~  337 (1045)
T 1k32_A          261 FSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY--VLKVPEPLR  337 (1045)
T ss_dssp             EEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB--EEECSCCSC
T ss_pred             EEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc--eEEccCCCc
Confidence            3322222223221100000              00112344568 9999999888 8899999987643  334566766


Q ss_pred             -cEEEEEECCCCCEEEEeeCCCcEE-EEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         462 -LINCVEFSPDGRIIASASFDKSIK-LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       462 -~v~~v~~sp~g~~las~s~dg~i~-lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                       .+..++|+ ||+.|+.++.++.+. +||..+++.. .+.+|...+..++|||||++||+++.++.|++||+.+++....
T Consensus       338 ~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~  415 (1045)
T 1k32_A          338 IRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI  415 (1045)
T ss_dssp             EEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred             ceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe
Confidence             79999999 999999999888888 9998877654 4447878899999999999999999999999999999988777


Q ss_pred             ccCcCCCEEEEEEccCCCEEEEeeCCC----------cEEEcc
Q psy2671         540 LPGHGDEVYAVDWAPDGEKVASGGKDK----------VLRLWQ  572 (573)
Q Consensus       540 l~~h~~~v~~~~~s~d~~~l~s~~~d~----------~i~iw~  572 (573)
                      +.+|.+.+.+++|||||++|++++.++          .|++|+
T Consensus       416 ~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d  458 (1045)
T 1k32_A          416 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD  458 (1045)
T ss_dssp             EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred             ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEE
Confidence            778989999999999999999887754          899996

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.97  E-value=6.4e-28  Score=250.08  Aligned_cols=315  Identities=11%  Similarity=0.073  Sum_probs=240.0

Q ss_pred             EcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEEC--CCCceecccccCCc
Q psy2671         215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDS--STGKQIGQPMRGHK  292 (573)
Q Consensus       215 fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~--~~~~~~~~~~~~h~  292 (573)
                      |+|++..+++++.|++|.+||..+++.+.++..+.. +.+++|+|||++|++++.|+.|.+||+  .+++.+.. +. +.
T Consensus       145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~-i~-~g  221 (543)
T 1nir_A          145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE-IK-IG  221 (543)
T ss_dssp             CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE-EE-CC
T ss_pred             cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE-Ee-cC
Confidence            889999999999999999999999998888873333 889999999999999999999999999  77765533 33 33


Q ss_pred             ccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCC-----------CccEEEEEECCCc--EEEEEeC
Q psy2671         293 QWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVRVLTSH-----------TRSVTCIRWGGSG--LIYSASQ  358 (573)
Q Consensus       293 ~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~--~l~s~s~  358 (573)
                      ..+..++|+|+. ..+++++++++ .+++|++||..+.++++.+..+           ...+..+.+++++  .+++...
T Consensus       222 ~~p~~va~sp~~-~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~  300 (543)
T 1nir_A          222 IEARSVESSKFK-GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE  300 (543)
T ss_dssp             SEEEEEEECCST-TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             CCcceEEeCCCc-CCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence            456778776521 11577887776 5899999999999988877642           2368889998754  5777888


Q ss_pred             CCeEEEEeCCCCeeeE--eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE-
Q psy2671         359 DRTIKVWRASDGVMCR--TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG-  435 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-  435 (573)
                      +++|.+||..++..+.  .+. +..++..+                                     .++|+|++++++ 
T Consensus       301 ~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~-------------------------------------~~spdg~~l~va~  342 (543)
T 1nir_A          301 TGKVLLVNYKDIDNLTVTSIG-AAPFLHDG-------------------------------------GWDSSHRYFMTAA  342 (543)
T ss_dssp             TTEEEEEECTTSSSCEEEEEE-CCSSCCCE-------------------------------------EECTTSCEEEEEE
T ss_pred             CCeEEEEEecCCCcceeEEec-cCcCccCc-------------------------------------eECCCCCEEEEEe
Confidence            9999999998764332  111 22222222                                     234778876554 


Q ss_pred             eCCCeEEEEcCCCCccceeeecc----ccccEEEEEECCC-CCEEEEee-CCCcEEEEeCCC-------CeEEEeecCCc
Q psy2671         436 SDDFTLFLWNPEKEKKSLARMTG----HQQLINCVEFSPD-GRIIASAS-FDKSIKLWDGRI-------GKFITTLRGHV  502 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~sp~-g~~las~s-~dg~i~lwd~~~-------~~~~~~~~~h~  502 (573)
                      ..+++|.+||+.+++. ...+..    |......+ ++|+ |.+++++. .|++|.+||..+       ++.++++.+|.
T Consensus       343 ~~~~~v~v~D~~tg~l-~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g  420 (543)
T 1nir_A          343 NNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG  420 (543)
T ss_dssp             GGGTEEEEEETTTTEE-EEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC
T ss_pred             cCCCeEEEEECCCCeE-EEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC
Confidence            5689999999987643 333332    54433333 4777 67777775 689999999988       89999999998


Q ss_pred             ceEEEEEECCCCCEEEEEe-------CCCcEEEEeCCccccc-ccc--------cCcCCCEEEEEEccCCCEEEEee---
Q psy2671         503 QAVYMVAWSSDSRLLVSGS-------ADSTLKVWNMKTKKIE-QDL--------PGHGDEVYAVDWAPDGEKVASGG---  563 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s-------~D~~v~vwd~~~~~~~-~~l--------~~h~~~v~~~~~s~d~~~l~s~~---  563 (573)
                      ..+..++++|||++|++++       .+++|.+||+.+++.. ..+        ..+...+..++|+|||++|..+.   
T Consensus       421 ~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~  500 (543)
T 1nir_A          421 GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNG  500 (543)
T ss_dssp             SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECC
T ss_pred             CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecC
Confidence            8888999999999999987       2779999999988876 332        45678899999999999988652   


Q ss_pred             --CCCcEEEccC
Q psy2671         564 --KDKVLRLWQN  573 (573)
Q Consensus       564 --~d~~i~iw~~  573 (573)
                        .|+.|.+|+.
T Consensus       501 ~~~~~~i~v~D~  512 (543)
T 1nir_A          501 KNDSSALVVVDD  512 (543)
T ss_dssp             TTSCCEEEEEET
T ss_pred             CCCCCeEEEEEC
Confidence              4799999973

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.97  E-value=9.5e-29  Score=248.74  Aligned_cols=247  Identities=17%  Similarity=0.186  Sum_probs=185.7

Q ss_pred             CCeEEEEeCC------CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC---eEEEEECCCCceeccccc
Q psy2671         219 GRSLASGSGD------TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG---VIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       219 g~~las~s~d------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg---~i~vwd~~~~~~~~~~~~  289 (573)
                      +..++.++.+      ++|++||+.. .....+.+|...|.+++|+|||++|++++.++   .|++||+.+++..  .+.
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--~l~  219 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--QVA  219 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--EEE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE--Eee
Confidence            5566666654      7999999975 44566778899999999999999999999885   9999999988764  355


Q ss_pred             CCcccEEEEEecccccCCCCCEEE-EEeCCCc--EEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC-CCeEEE
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFA-SSGKDGA--IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ-DRTIKV  364 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~-d~~i~v  364 (573)
                      .|...+.+++|+|     +++.|+ +++.++.  |++||+.+++. ..+..|...+.+++|++++ .|+.++. ++..  
T Consensus       220 ~~~~~~~~~~~sp-----dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~--  291 (415)
T 2hqs_A          220 SFPRHNGAPAFSP-----DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRP--  291 (415)
T ss_dssp             CCSSCEEEEEECT-----TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSC--
T ss_pred             cCCCcccCEEEcC-----CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCc--
Confidence            6778899999877     567777 6666655  88889887765 4566677777888887765 3444443 3321  


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW  444 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw  444 (573)
                                                                                                 .|++|
T Consensus       292 ---------------------------------------------------------------------------~i~~~  296 (415)
T 2hqs_A          292 ---------------------------------------------------------------------------QVYKV  296 (415)
T ss_dssp             ---------------------------------------------------------------------------EEEEE
T ss_pred             ---------------------------------------------------------------------------EEEEE
Confidence                                                                                       23333


Q ss_pred             cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC---CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe
Q psy2671         445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD---KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d---g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s  521 (573)
                      |+.++.  ...+..+...+.+++|+|||++|++++.+   ..|++||..+++. ..+..|. .+.+++|+|||++|++++
T Consensus       297 d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s  372 (415)
T 2hqs_A          297 NINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSS  372 (415)
T ss_dssp             ETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEE
T ss_pred             ECCCCC--EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEE
Confidence            333221  12233344567889999999999988764   5899999998876 4555554 789999999999999998


Q ss_pred             CCC---cEEEEeCCcccccccccCcCCCEEEEEEccCC
Q psy2671         522 ADS---TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDG  556 (573)
Q Consensus       522 ~D~---~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~  556 (573)
                      .|+   .|++||+. +.....+.+|.+.|.+++|+|.-
T Consensus       373 ~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~  409 (415)
T 2hqs_A          373 SQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL  409 (415)
T ss_dssp             EETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred             cCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence            877   79999997 45567789999999999999964

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=4.2e-27  Score=255.87  Aligned_cols=346  Identities=12%  Similarity=0.164  Sum_probs=235.7

Q ss_pred             cccEEEEEEcCCCCeeEEeeC-CC-----cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         110 AEAVISVKFSPNGRSLASGSG-DT-----TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~-D~-----~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      ...|.+++|||||++||+++. |+     +|++||+.+++...........  +                   ....+  
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~--~-------------------~~~~~--   92 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL--P-------------------GTETL--   92 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC-----------------------------
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc--c-------------------ccccc--
Confidence            557999999999999999998 88     9999999988653221100000  0                   00000  


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDS  261 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg  261 (573)
                      ..... ..+  .    ..... ....|.+++|||||++|++++. +.|++||+.++.  ....+..|...+.+++|||||
T Consensus        93 ~~~~~-~~~--~----~~~~~-~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG  163 (741)
T 2ecf_A           93 SDEEK-ARR--E----RQRIA-AMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG  163 (741)
T ss_dssp             ----------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS
T ss_pred             cchhh-hhh--h----hhhhc-cccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC
Confidence            00000 000  0    00001 1234778999999999999986 899999998873  345567788889999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCccc----------------EEEEEecccccCCCCCEEEEEeCCC------
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW----------------ITALSWEPFHLNHQCRRFASSGKDG------  319 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~----------------v~~~~~~~~~~~~~~~~l~s~~~dg------  319 (573)
                      ++|++++ ++.|++||+.+++... ....+...                +.++.|+|     ++++|+.++.|+      
T Consensus       164 ~~la~~~-~~~i~~~d~~~g~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-----Dg~~l~~~~~d~~~~~~~  236 (741)
T 2ecf_A          164 GFVSFIR-GRNLWVIDLASGRQMQ-LTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-----DDSAIAYARIDESPVPVQ  236 (741)
T ss_dssp             SEEEEEE-TTEEEEEETTTTEEEE-CCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-----TSSCEEEEEEECTTSCEE
T ss_pred             CEEEEEe-CCcEEEEecCCCCEEE-eccCCccceeccccceeeeeccccccceEECC-----CCCEEEEEEEcCCCCceE
Confidence            9999887 5699999998876542 22222221                25566665     778888887665      


Q ss_pred             ---------------------------cEEEEECCC-CeEEEEec--CCCccEEEEEECCCc-EEEEEe-----CCCeEE
Q psy2671         320 ---------------------------AIRIWDVIL-SQCVRVLT--SHTRSVTCIRWGGSG-LIYSAS-----QDRTIK  363 (573)
Q Consensus       320 ---------------------------~v~iwd~~~-~~~~~~~~--~h~~~v~~~~~~~~~-~l~s~s-----~d~~i~  363 (573)
                                                 .|++||+.+ ++......  .|...+..++| +++ .|+.++     .+..|.
T Consensus       237 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~  315 (741)
T 2ecf_A          237 KRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLV  315 (741)
T ss_dssp             EEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEE
T ss_pred             ecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEE
Confidence                                       788999988 76655443  47788999999 887 455443     357899


Q ss_pred             EEeCCCCeeeEeccCCcc-ee---eEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         364 VWRASDGVMCRTLEGHAH-WV---NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       364 vw~~~~~~~~~~~~~~~~-~v---~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      +||+.++.....+..+.. ++   ..+                                     .++|+|+++++++.||
T Consensus       316 ~~d~~~g~~~~~~~~~~~~~~~~~~~~-------------------------------------~~spdg~~~~~~~~~g  358 (741)
T 2ecf_A          316 EVTLASNQQRVLAHETSPTWVPLHNSL-------------------------------------RFLDDGSILWSSERTG  358 (741)
T ss_dssp             EEETTTCCEEEEEEEECSSCCCCCSCC-------------------------------------EECTTSCEEEEECTTS
T ss_pred             EEECCCCceEEEEEcCCCCcCCcCCce-------------------------------------EECCCCeEEEEecCCC
Confidence            999998876554433221 11   111                                     2347788888999999


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEE-EECCCCCEEEE-eeCCC--cEEEEeCCC-CeEEEeecCCcceEEEEEECCCC
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCV-EFSPDGRIIAS-ASFDK--SIKLWDGRI-GKFITTLRGHVQAVYMVAWSSDS  514 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v-~~sp~g~~las-~s~dg--~i~lwd~~~-~~~~~~~~~h~~~v~~v~~s~dg  514 (573)
                      .+++|....... ...+..|...+..+ .|+|+|+.|+. ++.++  .++||+... ++....+.. ...+..++|||||
T Consensus       359 ~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg  436 (741)
T 2ecf_A          359 FQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNA  436 (741)
T ss_dssp             SCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTS
T ss_pred             ccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCC
Confidence            877776553333 56677777778887 59999997754 55555  899998764 554566655 5668899999999


Q ss_pred             CEEEEEeCC----CcEEEEeCCcc
Q psy2671         515 RLLVSGSAD----STLKVWNMKTK  534 (573)
Q Consensus       515 ~~las~s~D----~~v~vwd~~~~  534 (573)
                      ++|+....+    ..+.+|+..++
T Consensus       437 ~~l~~~~~~~~~p~~~~l~~~~~~  460 (741)
T 2ecf_A          437 SVYVDSWSNNSTPPQIELFRANGE  460 (741)
T ss_dssp             SEEEEEEEETTEEEEEEEEETTSC
T ss_pred             CEEEEEecCCCCCCeEEEEEcCCC
Confidence            998866443    46888987543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=2e-26  Score=250.46  Aligned_cols=316  Identities=14%  Similarity=0.170  Sum_probs=231.2

Q ss_pred             CCcEEEEEEcCCCCeEEEEeC-CC-----eEEEEECCCCeeeEEecCCC------------------------CcEEEEE
Q psy2671         207 AEAVISVKFSPNGRSLASGSG-DT-----TVRFWDVTTQTPLFKCEGHK------------------------HWVLCIA  256 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~-d~-----~i~iwd~~~~~~~~~~~~h~------------------------~~V~~v~  256 (573)
                      ...|.+++|||||++|++++. |+     +|++||+.+++.......+.                        ..|.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            457899999999999999998 88     99999999987665554432                        2378999


Q ss_pred             EcCCCCeEEEEeeCCeEEEEECCCC---ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy2671         257 WSPDSKQLVSGCKNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR  333 (573)
Q Consensus       257 ~s~dg~~l~sgs~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  333 (573)
                      |||||++|++++. +.|++||+.++   ..  ..+..|...+..+.|+|     ++++++.++ ++.|++||+.+++..+
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~--~~l~~~~~~~~~~~~SP-----DG~~la~~~-~~~i~~~d~~~g~~~~  186 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAV--RQLTHGEGFATDAKLSP-----KGGFVSFIR-GRNLWVIDLASGRQMQ  186 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSC--CBCCCSSSCEEEEEECT-----TSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceE--EEcccCCcccccccCCC-----CCCEEEEEe-CCcEEEEecCCCCEEE
Confidence            9999999999886 99999999887   33  34566777899999877     678888877 5699999999887766


Q ss_pred             EecCCCcc----------------EEEEEECCCc-EEEEEeCCC---------------------------------eEE
Q psy2671         334 VLTSHTRS----------------VTCIRWGGSG-LIYSASQDR---------------------------------TIK  363 (573)
Q Consensus       334 ~~~~h~~~----------------v~~~~~~~~~-~l~s~s~d~---------------------------------~i~  363 (573)
                      ....+...                +.++.|++++ .|++++.|+                                 .|.
T Consensus       187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~  266 (741)
T 2ecf_A          187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG  266 (741)
T ss_dssp             CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred             eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence            55544432                3779999998 477776654                                 677


Q ss_pred             EEeCCC-CeeeEecc--CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC---
Q psy2671         364 VWRASD-GVMCRTLE--GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD---  437 (573)
Q Consensus       364 vw~~~~-~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---  437 (573)
                      +||+.+ +.......  .|...+..+++ +                                     +|+.|+.++.   
T Consensus       267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-p-------------------------------------Dg~~l~~~~~~~~  308 (741)
T 2ecf_A          267 VISPAEQAQTQWIDLGKEQDIYLARVNW-R-------------------------------------DPQHLSFQRQSRD  308 (741)
T ss_dssp             EECSSTTCCCEEECCCSCSSEEEEEEEE-E-------------------------------------ETTEEEEEEEETT
T ss_pred             EEECCCCCceEEecCCCCcceEEEEEEe-C-------------------------------------CCCEEEEEEeccc
Confidence            778776 65443322  24445555554 4                                     4666665543   


Q ss_pred             --CCeEEEEcCCCCccceeeeccccc----cEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeEEEeecCCcceEEEE-E
Q psy2671         438 --DFTLFLWNPEKEKKSLARMTGHQQ----LINCVEFSPDGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYMV-A  509 (573)
Q Consensus       438 --dg~i~lwd~~~~~~~~~~~~~h~~----~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~~~~~~~h~~~v~~v-~  509 (573)
                        +..|++||+.++.. ...+..+..    .+..++|+|||+++++++.||.++||... .++ ...+..|...+..+ +
T Consensus       309 ~~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~  386 (741)
T 2ecf_A          309 QKKLDLVEVTLASNQQ-RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA  386 (741)
T ss_dssp             SSEEEEEEEETTTCCE-EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred             CCeEEEEEEECCCCce-EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence              56899999887643 222223322    34678999999999999999988888654 345 77788787788877 5


Q ss_pred             ECCCCCEEEE-EeCCC--cEEEEeCCc-ccccccccCcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671         510 WSSDSRLLVS-GSADS--TLKVWNMKT-KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ  572 (573)
Q Consensus       510 ~s~dg~~las-~s~D~--~v~vwd~~~-~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~  572 (573)
                      |+|||+.|+. ++.++  .++||++.. ++....+.+ ...+.+++|||||++|+....+    ..+.+|+
T Consensus       387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~  456 (741)
T 2ecf_A          387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR  456 (741)
T ss_dssp             EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred             EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence            9999997754 45555  899999864 554556665 5678999999999998865433    3455553

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.95  E-value=2.3e-27  Score=257.18  Aligned_cols=342  Identities=14%  Similarity=0.108  Sum_probs=230.1

Q ss_pred             EEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEE
Q psy2671         113 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQ  192 (573)
Q Consensus       113 V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (573)
                      +.+++|+|||+++++ +.|++|++||..++++...                                             
T Consensus        19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~---------------------------------------------   52 (723)
T 1xfd_A           19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVL---------------------------------------------   52 (723)
T ss_dssp             CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEE---------------------------------------------
T ss_pred             ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEE---------------------------------------------
Confidence            567899999998877 7899999999988754311                                             


Q ss_pred             EeeccccccCCCCCCC---cEEEEEEcCCCCeEEEEeCC---------CeEEEEECCCCee--eEEecCCCCcEEEEEEc
Q psy2671         193 VRPVTRCTSSMPGHAE---AVISVKFSPNGRSLASGSGD---------TTVRFWDVTTQTP--LFKCEGHKHWVLCIAWS  258 (573)
Q Consensus       193 ~~~~~~~~~~~~gh~~---~V~~~~fsp~g~~las~s~d---------~~i~iwd~~~~~~--~~~~~~h~~~V~~v~~s  258 (573)
                                +.+|..   .|.+++|||||++|++++.+         +.+.+||+.+++.  +....+|...+.+++||
T Consensus        53 ----------~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~S  122 (723)
T 1xfd_A           53 ----------IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWG  122 (723)
T ss_dssp             ----------ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBC
T ss_pred             ----------eccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEEC
Confidence                      112332   48899999999999999875         7888999998765  22233455568899999


Q ss_pred             CCCCeEEEEeeCCeEEEEECCCCceecccccCCccc------------------EEEEEecccccCCCCCEEEEEeCC-C
Q psy2671         259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW------------------ITALSWEPFHLNHQCRRFASSGKD-G  319 (573)
Q Consensus       259 ~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~------------------v~~~~~~~~~~~~~~~~l~s~~~d-g  319 (573)
                      |||++|++++. +.|++||+.+++.... ...+...                  +.++.|+|     +++.|+.++.| +
T Consensus       123 PdG~~la~~~~-~~i~~~~~~~g~~~~~-~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-----Dg~~la~~~~~~~  195 (723)
T 1xfd_A          123 PKGQQLIFIFE-NNIYYCAHVGKQAIRV-VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-----DGTRLAYAAINDS  195 (723)
T ss_dssp             SSTTCEEEEET-TEEEEESSSSSCCEEE-ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-----TSSEEEEEEEECT
T ss_pred             CCCCEEEEEEC-CeEEEEECCCCceEEE-ecCCCCCceECcccceeEEEEeccCcceEEECC-----CCCEEEEEEECCC
Confidence            99999999876 7999999988765422 2222221                  26778776     67888887654 4


Q ss_pred             cEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC------cceeeEEEeccCce
Q psy2671         320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH------AHWVNTLALSTDYL  393 (573)
Q Consensus       320 ~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~------~~~v~~~~~s~~~~  393 (573)
                      .+++|++....     ..+...+..+.+.++|..   ..+..|.+||+.++.....+..+      ...+..++++    
T Consensus       196 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S----  263 (723)
T 1xfd_A          196 RVPIMELPTYT-----GSIYPTVKPYHYPKAGSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA----  263 (723)
T ss_dssp             TSCEEEECCCS-----SSSSCCCEEEECCBTTSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES----
T ss_pred             ccceEEeeccC-----CcCCCcceeccCCCCCCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe----
Confidence            67777754221     112334667777655531   33458999999888755555543      4455556555    


Q ss_pred             eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC----CCeEEEEcCCCCccceeeeccccccE----EE
Q psy2671         394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD----DFTLFLWNPEKEKKSLARMTGHQQLI----NC  465 (573)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~----dg~i~lwd~~~~~~~~~~~~~h~~~v----~~  465 (573)
                                                       |+|+.+++.+.    +..|++||+.++.........+...+    ..
T Consensus       264 ---------------------------------pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~  310 (723)
T 1xfd_A          264 ---------------------------------TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEE  310 (723)
T ss_dssp             ---------------------------------SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCC
T ss_pred             ---------------------------------CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCC
Confidence                                             45666655542    35799999877643221112223333    37


Q ss_pred             EEECCCCCEEEE--eeCCC------cEEEEe-CCCCe--EEEeecCCcceEE-EEEECCCCCEEEEEeCC---CcEEEEe
Q psy2671         466 VEFSPDGRIIAS--ASFDK------SIKLWD-GRIGK--FITTLRGHVQAVY-MVAWSSDSRLLVSGSAD---STLKVWN  530 (573)
Q Consensus       466 v~~sp~g~~las--~s~dg------~i~lwd-~~~~~--~~~~~~~h~~~v~-~v~~s~dg~~las~s~D---~~v~vwd  530 (573)
                      ++|+|||+.|+.  +..++      .|.+|| ...++  ....+..+...+. .++|||||+.|+..+.+   +.++||+
T Consensus       311 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~  390 (723)
T 1xfd_A          311 PVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS  390 (723)
T ss_dssp             CEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred             ceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence            899999997775  45677      577778 34443  1445543333344 47999999999866655   7899999


Q ss_pred             CCccc--ccccccC---cCCCEEEEEEccCCCEEEEe
Q psy2671         531 MKTKK--IEQDLPG---HGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       531 ~~~~~--~~~~l~~---h~~~v~~~~~s~d~~~l~s~  562 (573)
                      +....  ....+..   |...+..++|||||++|+..
T Consensus       391 ~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~  427 (723)
T 1xfd_A          391 ANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK  427 (723)
T ss_dssp             ECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred             EeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence            86432  3334443   66778899999999988754

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.94  E-value=1.1e-25  Score=226.29  Aligned_cols=277  Identities=16%  Similarity=0.144  Sum_probs=206.5

Q ss_pred             CCCcEEEEEEcCCCC-eEEEEe----CCC----eEEEEEC--CCCeee--EEecCCCCcEEEEEEcC-------------
Q psy2671         206 HAEAVISVKFSPNGR-SLASGS----GDT----TVRFWDV--TTQTPL--FKCEGHKHWVLCIAWSP-------------  259 (573)
Q Consensus       206 h~~~V~~~~fsp~g~-~las~s----~d~----~i~iwd~--~~~~~~--~~~~~h~~~V~~v~~s~-------------  259 (573)
                      +...+....|++.|. .+++|+    .||    +|+|||+  .+++.+  ..+.+|...+..+++++             
T Consensus        61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~  140 (415)
T 2hqs_A           61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG  140 (415)
T ss_dssp             SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence            445677778888875 555776    567    9999999  888877  44788888888887764             


Q ss_pred             -CCCeEEEEeeC------CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC---cEEEEECCCC
Q psy2671         260 -DSKQLVSGCKN------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG---AIRIWDVILS  329 (573)
Q Consensus       260 -dg~~l~sgs~d------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~  329 (573)
                       .+.+++.++.+      +.|++||+..+..  ..+.+|...+.+++|+|     +++++++++.++   .|++||+.++
T Consensus       141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~--~~l~~~~~~v~~~~~Sp-----dg~~la~~s~~~~~~~i~~~d~~tg  213 (415)
T 2hqs_A          141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ--FVVHRSPQPLMSPAWSP-----DGSKLAYVTFESGRSALVIQTLANG  213 (415)
T ss_dssp             CTTCEEEEEEECSSSSCCEEEEEEETTSCSC--EEEEEESSCEEEEEECT-----TSSEEEEEECTTSSCEEEEEETTTC
T ss_pred             cCCCEEEEEEecCCCCccceEEEEcCCCCCC--EEEeCCCCcceeeEEcC-----CCCEEEEEEecCCCcEEEEEECCCC
Confidence             26677777665      7999999975432  34567888999999987     678899998875   8999999887


Q ss_pred             eEEEEecCCCccEEEEEECCCcE-EE-EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeC
Q psy2671         330 QCVRVLTSHTRSVTCIRWGGSGL-IY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD  407 (573)
Q Consensus       330 ~~~~~~~~h~~~v~~~~~~~~~~-l~-s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~  407 (573)
                      +.. .+..|...+.+++|++++. |+ +++.|+.                                              
T Consensus       214 ~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~----------------------------------------------  246 (415)
T 2hqs_A          214 AVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGS----------------------------------------------  246 (415)
T ss_dssp             CEE-EEECCSSCEEEEEECTTSSEEEEEECTTSS----------------------------------------------
T ss_pred             cEE-EeecCCCcccCEEEcCCCCEEEEEEecCCC----------------------------------------------
Confidence            764 4556777788888877662 33 4444332                                              


Q ss_pred             CCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CC--cE
Q psy2671         408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DK--SI  484 (573)
Q Consensus       408 ~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg--~i  484 (573)
                                                     ..|++||+.++.  ...+..|...+.+++|+|||+.|++++. ++  .|
T Consensus       247 -------------------------------~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i  293 (415)
T 2hqs_A          247 -------------------------------LNLYVMDLASGQ--IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV  293 (415)
T ss_dssp             -------------------------------CEEEEEETTTCC--EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred             -------------------------------ceEEEEECCCCC--EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence                                           123444443322  2334456677899999999999998876 45  67


Q ss_pred             EEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC---CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEE
Q psy2671         485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       485 ~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D---~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      .+||..+++. ..+..|...+.+++|||||++|++++.+   ..|++||+.+++.. .+..|. .+.+++|+|||++|++
T Consensus       294 ~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~  370 (415)
T 2hqs_A          294 YKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIY  370 (415)
T ss_dssp             EEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEE
T ss_pred             EEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEE
Confidence            7789888764 4455666788999999999999988764   58999999988764 455554 8999999999999999


Q ss_pred             eeCCC---cEEEcc
Q psy2671         562 GGKDK---VLRLWQ  572 (573)
Q Consensus       562 ~~~d~---~i~iw~  572 (573)
                      ++.|+   .|++|+
T Consensus       371 ~s~~~~~~~l~~~d  384 (415)
T 2hqs_A          371 SSSQGMGSVLNLVS  384 (415)
T ss_dssp             EEEETTEEEEEEEE
T ss_pred             EEcCCCccEEEEEE
Confidence            98887   688885

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=2.4e-24  Score=232.75  Aligned_cols=283  Identities=14%  Similarity=0.149  Sum_probs=201.6

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC-----C
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST-----G  281 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~-----~  281 (573)
                      ...|.+++|||| +.++.+. |++|++||+.+++... +..+...+.+++|||||++|++ +.++.|++||+.+     +
T Consensus        81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g  156 (706)
T 2z3z_A           81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMS  156 (706)
T ss_dssp             -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCC
T ss_pred             ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCC
Confidence            356899999999 6666554 5999999999886543 4456667888999999999998 4789999999988     7


Q ss_pred             ceecccccCCccc--------------EEEEEecccccCCCCCEEEEEe-------------------------------
Q psy2671         282 KQIGQPMRGHKQW--------------ITALSWEPFHLNHQCRRFASSG-------------------------------  316 (573)
Q Consensus       282 ~~~~~~~~~h~~~--------------v~~~~~~~~~~~~~~~~l~s~~-------------------------------  316 (573)
                      +.... ...+...              +.++.|+|     ++++|++++                               
T Consensus       157 ~~~~~-~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-----Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~  230 (706)
T 2z3z_A          157 RAIAV-TIDGTETLVYGQAVHQREFGIEKGTFWSP-----KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT  230 (706)
T ss_dssp             CCEES-CSCCBTTEEESSCCGGGCTTCCCSEEECT-----TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred             CcEEe-ccCCCCCeEcccchhhhhcCCCceEEECC-----CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence            64422 2222222              36677765     778898887                               


Q ss_pred             --CCCcEEEEECCCCeEEEEec--CCCccEEEEEECCCc-EEEEEeCCC-----eEEEEeCCCCeeeEecc--CCcceee
Q psy2671         317 --KDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSG-LIYSASQDR-----TIKVWRASDGVMCRTLE--GHAHWVN  384 (573)
Q Consensus       317 --~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~-~l~s~s~d~-----~i~vw~~~~~~~~~~~~--~~~~~v~  384 (573)
                        .+..|++||+.+++......  .|...+.+++|++++ .+++++.++     .|.+||+.++.....+.  .+..++.
T Consensus       231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~  310 (706)
T 2z3z_A          231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE  310 (706)
T ss_dssp             CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred             CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence              45679999999887655442  567789999999998 577777665     89999998873222221  1111100


Q ss_pred             EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC--CCcEEEEEeCCCeEEEEcCCCCccceeeecccccc
Q psy2671         385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP--EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL  462 (573)
Q Consensus       385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~  462 (573)
                                                        ......++|  +|+++++++.|+.+++|...........+..|...
T Consensus       311 ----------------------------------~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~  356 (706)
T 2z3z_A          311 ----------------------------------PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE  356 (706)
T ss_dssp             ----------------------------------CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred             ----------------------------------ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence                                              000113457  78889999999999999875333445666777777


Q ss_pred             EEE-EEECCCCCEEEEeeC-CC----cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC----CcEEEEeCC
Q psy2671         463 INC-VEFSPDGRIIASASF-DK----SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD----STLKVWNMK  532 (573)
Q Consensus       463 v~~-v~~sp~g~~las~s~-dg----~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D----~~v~vwd~~  532 (573)
                      +.. ++|+|+|+.|+.++. ++    .|..||..+++ ...+. |...+.+++|||||++|+.++.+    +.|++||+.
T Consensus       357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~  434 (706)
T 2z3z_A          357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG  434 (706)
T ss_dssp             EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred             EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence            876 799999998766554 44    67777877765 33443 56678999999999998876543    459999998


Q ss_pred             ccc
Q psy2671         533 TKK  535 (573)
Q Consensus       533 ~~~  535 (573)
                      +++
T Consensus       435 ~~~  437 (706)
T 2z3z_A          435 KGS  437 (706)
T ss_dssp             SCE
T ss_pred             CCe
Confidence            876

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.93  E-value=1e-23  Score=227.84  Aligned_cols=310  Identities=14%  Similarity=0.145  Sum_probs=214.7

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCC-----------------CcEEEEEEcCCCCeEEEEeeCC
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHK-----------------HWVLCIAWSPDSKQLVSGCKNG  271 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~-----------------~~V~~v~~s~dg~~l~sgs~dg  271 (573)
                      +..+.|+  |..+++++.|+ | +||+.+++.+ ..+..|.                 ..|.+++|||| ++++.+ .++
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~  101 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG  101 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence            3446777  66778888888 8 9999988762 2222222                 46999999999 666555 469


Q ss_pred             eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-----CeEEEEecCCCcc-----
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-----SQCVRVLTSHTRS-----  341 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~h~~~-----  341 (573)
                      .|++||+.+++..  .+..+...+..++|+|     ++++++.+ .++.|++||+.+     ++.......+...     
T Consensus       102 ~i~~~d~~~~~~~--~l~~~~~~~~~~~~Sp-----dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~  173 (706)
T 2z3z_A          102 GLVGFDMLARKVT--YLFDTNEETASLDFSP-----VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ  173 (706)
T ss_dssp             EEEEEETTTTEEE--EEECCTTCCTTCEECT-----TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred             EEEEEECCCCceE--EccCCcccccCCcCCC-----CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence            9999999887643  2233445566666665     77888884 689999999988     7766555444443     


Q ss_pred             ---------EEEEEECCCc-EEEEEe---------------------------------CCCeEEEEeCCCCeeeEecc-
Q psy2671         342 ---------VTCIRWGGSG-LIYSAS---------------------------------QDRTIKVWRASDGVMCRTLE-  377 (573)
Q Consensus       342 ---------v~~~~~~~~~-~l~s~s---------------------------------~d~~i~vw~~~~~~~~~~~~-  377 (573)
                               +.++.|++++ .|++++                                 .+..|.+||+.++....... 
T Consensus       174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~  253 (706)
T 2z3z_A          174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG  253 (706)
T ss_dssp             CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred             chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence                     4789999988 577666                                 34678889988876543332 


Q ss_pred             -CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC-----eEEEEcCCCCcc
Q psy2671         378 -GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF-----TLFLWNPEKEKK  451 (573)
Q Consensus       378 -~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg-----~i~lwd~~~~~~  451 (573)
                       .|...+..++++                                     |+|+.|++++.++     .|++||+.++..
T Consensus       254 ~~~~~~~~~~~~s-------------------------------------pdg~~l~~~~~~~~~~~~~v~~~d~~~g~~  296 (706)
T 2z3z_A          254 EPKEKFLTNLSWS-------------------------------------PDENILYVAEVNRAQNECKVNAYDAETGRF  296 (706)
T ss_dssp             SCTTCEEEEEEEC-------------------------------------TTSSEEEEEEECTTSCEEEEEEEETTTCCE
T ss_pred             CCCceeEeeEEEE-------------------------------------CCCCEEEEEEeCCCCCeeEEEEEECCCCce
Confidence             344455555554                                     6678888877665     899999987622


Q ss_pred             ceeeec-cccc---cEEEEEECC--CCCEEEEeeCCCcEEEEeCC-CCeEEEeecCCcceEEE-EEECCCCCEEEEEeC-
Q psy2671         452 SLARMT-GHQQ---LINCVEFSP--DGRIIASASFDKSIKLWDGR-IGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSA-  522 (573)
Q Consensus       452 ~~~~~~-~h~~---~v~~v~~sp--~g~~las~s~dg~i~lwd~~-~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~-  522 (573)
                      ...... .+..   .+.+++|+|  ||+++++++.||.++||+.. .++.+..+..|...+.. ++|+|||+.|+.++. 
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~  376 (706)
T 2z3z_A          297 VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE  376 (706)
T ss_dssp             EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred             eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence            222111 1221   246789999  99999999999999999875 56777788877777876 799999998776554 


Q ss_pred             CC----cEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671         523 DS----TLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ  572 (573)
Q Consensus       523 D~----~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~  572 (573)
                      ++    .|..||+.+++ ...+. |...+.+++|||||++|+.+..+    +.|++|+
T Consensus       377 ~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d  432 (706)
T 2z3z_A          377 ASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN  432 (706)
T ss_dssp             SCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred             CCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence            43    56777777665 33343 66789999999999998876443    4588886

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=4.5e-24  Score=204.18  Aligned_cols=254  Identities=19%  Similarity=0.259  Sum_probs=180.9

Q ss_pred             EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC-CceecccccCC-cccEEEEEec
Q psy2671         224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST-GKQIGQPMRGH-KQWITALSWE  301 (573)
Q Consensus       224 s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~-~~~~~~~~~~h-~~~v~~~~~~  301 (573)
                      +++.|++|++||+.+++.. .+..|...|.+++|+|||++|++++ ++.|++||+.+ ++.. ....++ ...+.++.|.
T Consensus        17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~s   93 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE-KVDTGFATICNNDHGIS   93 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE-ECCCTTCCCBCSCCEEC
T ss_pred             CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce-EeccccccccccceEEC
Confidence            4467899999999988765 4456788899999999999999876 88999999988 7654 233344 3567777776


Q ss_pred             ccccCCCCCEEEEEe--CCCcEEEEEC--CCCeEEEEecCCCccEEEEEECCCc-E-EEEEeCCCeEEEEeCCCCeeeEe
Q psy2671         302 PFHLNHQCRRFASSG--KDGAIRIWDV--ILSQCVRVLTSHTRSVTCIRWGGSG-L-IYSASQDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       302 ~~~~~~~~~~l~s~~--~dg~v~iwd~--~~~~~~~~~~~h~~~v~~~~~~~~~-~-l~s~s~d~~i~vw~~~~~~~~~~  375 (573)
                      |     +++++++++  .++..++|.+  ..+. ...+..+. .+.+++|++++ . +++++.++.+++|++        
T Consensus        94 p-----dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~--------  158 (297)
T 2ojh_A           94 P-----DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSM--------  158 (297)
T ss_dssp             T-----TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEE--------
T ss_pred             C-----CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEE--------
Confidence            6     677888888  3345555543  3333 22333322 25566666554 2 224555555555543        


Q ss_pred             ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671         376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                                                                                             .........
T Consensus       159 -----------------------------------------------------------------------~~~~~~~~~  167 (297)
T 2ojh_A          159 -----------------------------------------------------------------------DIDSGVETR  167 (297)
T ss_dssp             -----------------------------------------------------------------------ETTTCCEEE
T ss_pred             -----------------------------------------------------------------------ECCCCcceE
Confidence                                                                                   211111233


Q ss_pred             eccccccEEEEEECCCCCEEEEee-CCCcEEEEeCC-CCeEEEeecCCcceEEEEEECCCCCEEEEEeCC----------
Q psy2671         456 MTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGR-IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD----------  523 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~-~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D----------  523 (573)
                      +..+...+.+++|+|+|+.|+.++ .++.+++|+.. .+..+..+..|...+..++|+|||++|++++.+          
T Consensus       168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~  247 (297)
T 2ojh_A          168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL  247 (297)
T ss_dssp             CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred             cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence            444566789999999999888766 58999999875 455667788888889999999999999988766          


Q ss_pred             -CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         524 -STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       524 -~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                       +.|++||+.+++.  +..+.+|...+..+.|+||+++|++++.|.
T Consensus       248 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          248 DVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             ceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence             5699999988765  334457888899999999999999887664

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.92  E-value=9.4e-24  Score=228.84  Aligned_cols=310  Identities=15%  Similarity=0.163  Sum_probs=212.4

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC---cEEEEEEcCCCCeEEEEeeC---------CeEEEE
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH---WVLCIAWSPDSKQLVSGCKN---------GVIHAW  276 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~---~V~~v~~s~dg~~l~sgs~d---------g~i~vw  276 (573)
                      .+.+++|+|||+++++ +.|++|++||+.+++....+.+|..   .|.+++|||||++|++++.+         +.+.+|
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~   96 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS   96 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence            3567899999998776 7899999999999887777777765   48999999999999998774         788999


Q ss_pred             ECCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE-------------
Q psy2671         277 DSSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV-------------  342 (573)
Q Consensus       277 d~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-------------  342 (573)
                      |+.+++.. .....+|...+..++|+|     +++.++.++. +.|++||+.+++..+....+...+             
T Consensus        97 d~~~~~~~~l~~~~~~~~~~~~~~~SP-----dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee  170 (723)
T 1xfd_A           97 KIPHGDPQSLDPPEVSNAKLQYAGWGP-----KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE  170 (723)
T ss_dssp             ESSSCCCEECCCTTCCSCCCSBCCBCS-----STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred             ECCCCceEeccCCccccccccccEECC-----CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence            99988642 112234444566666665     7888998876 799999999887776655544333             


Q ss_pred             -----EEEEECCCc-EEEEEeC-CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         343 -----TCIRWGGSG-LIYSASQ-DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       343 -----~~~~~~~~~-~l~s~s~-d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                           .++.|++++ .|+.++. ++.+++|++....     ..+...+..+.+.                          
T Consensus       171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--------------------------  219 (723)
T 1xfd_A          171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT-----GSIYPTVKPYHYP--------------------------  219 (723)
T ss_dssp             TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS-----SSSSCCCEEEECC--------------------------
T ss_pred             eccCcceEEECCCCCEEEEEEECCCccceEEeeccC-----CcCCCcceeccCC--------------------------
Confidence                 789999998 5666654 4566777653211     0011112222221                          


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc------ccccEEEEEECCCCCEEEEeeC----CCcEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG------HQQLINCVEFSPDGRIIASASF----DKSIK  485 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~------h~~~v~~v~~sp~g~~las~s~----dg~i~  485 (573)
                                 +.|..    ..+.++++||+.+... ...+..      +...+..++|||||++|++.+.    +..|+
T Consensus       220 -----------~~G~~----~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~  283 (723)
T 1xfd_A          220 -----------KAGSE----NPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT  283 (723)
T ss_dssp             -----------BTTSC----CCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred             -----------CCCCC----CCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence                       12221    2235789999876542 223333      3567899999999999877653    35799


Q ss_pred             EEeCCCCeEEEeecC-CcceEE----EEEECCCCCEEEE--EeCCC------cEEEEe-CCccc--ccccccCcCCCEEE
Q psy2671         486 LWDGRIGKFITTLRG-HVQAVY----MVAWSSDSRLLVS--GSADS------TLKVWN-MKTKK--IEQDLPGHGDEVYA  549 (573)
Q Consensus       486 lwd~~~~~~~~~~~~-h~~~v~----~v~~s~dg~~las--~s~D~------~v~vwd-~~~~~--~~~~l~~h~~~v~~  549 (573)
                      +||+.+++....+.. +...+.    .++|||||+.|+.  +..|+      .|.+|| ..+++  +...+..+...+..
T Consensus       284 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~  363 (723)
T 1xfd_A          284 LCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTK  363 (723)
T ss_dssp             EEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEE
T ss_pred             EEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEe
Confidence            999999887665543 233332    7899999998775  45666      467777 34444  14555544445554


Q ss_pred             -EEEccCCCEEEEeeCC---CcEEEcc
Q psy2671         550 -VDWAPDGEKVASGGKD---KVLRLWQ  572 (573)
Q Consensus       550 -~~~s~d~~~l~s~~~d---~~i~iw~  572 (573)
                       +.|+|||+.|+..+.+   +.++||+
T Consensus       364 ~~~~spdg~~l~~~~~~~~~~~~~l~~  390 (723)
T 1xfd_A          364 ILAYDEKGNKIYFLSTEDLPRRRQLYS  390 (723)
T ss_dssp             EEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred             eeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence             6999999999866655   7788885

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.92  E-value=1.3e-23  Score=201.07  Aligned_cols=232  Identities=20%  Similarity=0.215  Sum_probs=165.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCC-CeeeEEecCC-CCcEEEEEEcCCCCeEEEEee--CC--eEEEEEC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-QTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCK--NG--VIHAWDS  278 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~-~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~--dg--~i~vwd~  278 (573)
                      .|...|.+++|+|+|++|++++ ++.|.+||+.+ ++......+| ...+.+++|+|||++|++++.  ++  .|..|+.
T Consensus        39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~  117 (297)
T 2ojh_A           39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS  117 (297)
T ss_dssp             EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred             cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence            3677899999999999999987 78999999998 7766655565 367899999999999999983  34  4555555


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEE-EEeCCCcEEEEECCC-CeEEEEecCCCccEEEEEECCCc-EEEE
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA-SSGKDGAIRIWDVIL-SQCVRVLTSHTRSVTCIRWGGSG-LIYS  355 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~-~~~~~~~~~h~~~v~~~~~~~~~-~l~s  355 (573)
                      .++..  ..+..+. .+..+.|.|     +++.++ +++.++.+++|++.. ......+..|...+.++.|++++ .++.
T Consensus       118 ~~~~~--~~~~~~~-~~~~~~~sp-----dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~  189 (297)
T 2ojh_A          118 TGGTP--RLMTKNL-PSYWHGWSP-----DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF  189 (297)
T ss_dssp             TCCCC--EECCSSS-SEEEEEECT-----TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred             CCCce--EEeecCC-CccceEECC-----CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence            55442  2233332 377778766     566666 788899999998532 23345566677777888887766 3433


Q ss_pred             Ee-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE
Q psy2671         356 AS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS  434 (573)
Q Consensus       356 ~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s  434 (573)
                      ++ .++.+++|++.                                                                  
T Consensus       190 ~~~~~~~~~i~~~~------------------------------------------------------------------  203 (297)
T 2ojh_A          190 NSSRTGQMQIWRVR------------------------------------------------------------------  203 (297)
T ss_dssp             EECTTSSCEEEEEE------------------------------------------------------------------
T ss_pred             EecCCCCccEEEEC------------------------------------------------------------------
Confidence            33 46666666542                                                                  


Q ss_pred             EeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC-----------CcEEEEeCCCCeE--EEeecCC
Q psy2671         435 GSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD-----------KSIKLWDGRIGKF--ITTLRGH  501 (573)
Q Consensus       435 g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d-----------g~i~lwd~~~~~~--~~~~~~h  501 (573)
                                   ........+..|...+.+++|+|+|++|++++.+           +.|.+||..+++.  +..+.+|
T Consensus       204 -------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~  270 (297)
T 2ojh_A          204 -------------VDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG  270 (297)
T ss_dssp             -------------TTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred             -------------CCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence                         1111122334455568889999999999988766           5699999988765  4445577


Q ss_pred             cceEEEEEECCCCCEEEEEeCCC
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      ...+.+++|+|||++|++++.|.
T Consensus       271 ~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          271 QGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             TTTSCSCCBCTTSSEEEEEEECC
T ss_pred             CcccccceECCCCCEEEEEEecc
Confidence            78889999999999999887654

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=2.1e-22  Score=196.47  Aligned_cols=275  Identities=8%  Similarity=0.075  Sum_probs=190.3

Q ss_pred             EEcCCCCe-EEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-CCeEEEEECCCCceecccccCC
Q psy2671         214 KFSPNGRS-LASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSSTGKQIGQPMRGH  291 (573)
Q Consensus       214 ~fsp~g~~-las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~~~~~~~~~~~~h  291 (573)
                      .|.+++.+ +++++.+++|.+||..+++.+.....+...+ +++|+|||+++++++. ++.|.+||+.+++........+
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            46665555 6788889999999999998877777666667 9999999998777666 8899999999887522333344


Q ss_pred             cccEEEEEecccccCCCCCEEEEEeCCC---cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEE-EeCCCe-EEEE
Q psy2671         292 KQWITALSWEPFHLNHQCRRFASSGKDG---AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYS-ASQDRT-IKVW  365 (573)
Q Consensus       292 ~~~v~~~~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s-~s~d~~-i~vw  365 (573)
                      .....++.|.|     ++++++++..++   .|++||+.+++.+..+..+. ...+++|++++ .+++ ...++. +.+|
T Consensus        83 ~~~~~~~~~s~-----dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~  156 (331)
T 3u4y_A           83 QSSMADVDITP-----DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRF  156 (331)
T ss_dssp             SSCCCCEEECT-----TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred             CCCccceEECC-----CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEE
Confidence            44443366654     677777554442   89999999888877765543 45788898887 3444 455577 8888


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      ++..........                                                                    
T Consensus       157 ~~~~~g~~~~~~--------------------------------------------------------------------  168 (331)
T 3u4y_A          157 KIDADGVLFDTG--------------------------------------------------------------------  168 (331)
T ss_dssp             EECTTCCEEEEE--------------------------------------------------------------------
T ss_pred             EECCCCcEeecC--------------------------------------------------------------------
Confidence            865321110000                                                                    


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCeE---EEeecCCcceEEEEEECCCCCEEEEEe
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRIGKF---ITTLRGHVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~~~~---~~~~~~h~~~v~~v~~s~dg~~las~s  521 (573)
                              ............++|+|+|++++ ++..++.|++||..+++.   +..+..+ ..+..++|+|||++|+.++
T Consensus       169 --------~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~  239 (331)
T 3u4y_A          169 --------QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLT  239 (331)
T ss_dssp             --------EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEEC
T ss_pred             --------CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEE
Confidence                    00001123367899999999655 455789999999999887   7777654 4567899999999776554


Q ss_pred             -CCCcEEEEeCCcccc--cccccCc----CC---CEEEEEEccCCCEEEEeeC-CCcEEEcc
Q psy2671         522 -ADSTLKVWNMKTKKI--EQDLPGH----GD---EVYAVDWAPDGEKVASGGK-DKVLRLWQ  572 (573)
Q Consensus       522 -~D~~v~vwd~~~~~~--~~~l~~h----~~---~v~~~~~s~d~~~l~s~~~-d~~i~iw~  572 (573)
                       .++.|.+||+.+++.  +..+..+    ..   ....++|+||+++|+.++. ++.|++|+
T Consensus       240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d  301 (331)
T 3u4y_A          240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT  301 (331)
T ss_dssp             SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence             578899999998876  2222211    11   2355899999999866554 56999997

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.91  E-value=3.3e-22  Score=194.97  Aligned_cols=279  Identities=11%  Similarity=0.121  Sum_probs=182.9

Q ss_pred             EEcCCCC-eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEee
Q psy2671         117 KFSPNGR-SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRP  195 (573)
Q Consensus       117 ~~s~~~~-~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (573)
                      .|.++++ .+++++.+++|++||..+++.+..                                                
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~------------------------------------------------   35 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQ------------------------------------------------   35 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEE------------------------------------------------
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeee------------------------------------------------
Confidence            4555554 578888999999999988764321                                                


Q ss_pred             ccccccCCCCCCCcEEEEEEcCCCCeEEEEeC-CCeEEEEECCCCee-eEEecCCCCcEEEEEEcCCCCeEEEEeeCC--
Q psy2671         196 VTRCTSSMPGHAEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTP-LFKCEGHKHWVLCIAWSPDSKQLVSGCKNG--  271 (573)
Q Consensus       196 ~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~-d~~i~iwd~~~~~~-~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg--  271 (573)
                             ...+...+ +++|+|+|+++++++. ++.|.+||+.+++. ......+.....+++|+|||++|+++..++  
T Consensus        36 -------~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~  107 (331)
T 3u4y_A           36 -------ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHP  107 (331)
T ss_dssp             -------EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSS
T ss_pred             -------EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCc
Confidence                   11234456 9999999997766665 89999999999887 666666666666699999999999665553  


Q ss_pred             -eEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCc-EEEEECCCCeEE----EEecCCCccEEE
Q psy2671         272 -VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGA-IRIWDVILSQCV----RVLTSHTRSVTC  344 (573)
Q Consensus       272 -~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~-v~iwd~~~~~~~----~~~~~h~~~v~~  344 (573)
                       .|.+||+.+++.+.. +.. .....+++|.|     +++ .+++...++. +++|++.....+    ............
T Consensus       108 ~~i~v~d~~~~~~~~~-~~~-~~~~~~~~~sp-----dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~  180 (331)
T 3u4y_A          108 FNMQSYSFLKNKFIST-IPI-PYDAVGIAISP-----NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFN  180 (331)
T ss_dssp             CEEEEEETTTTEEEEE-EEC-CTTEEEEEECT-----TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEE
T ss_pred             ccEEEEECCCCCeEEE-EEC-CCCccceEECC-----CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccc
Confidence             999999998876533 222 23457788776     555 4555566688 999998653322    111122334566


Q ss_pred             EEECCCc-EEEE-EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         345 IRWGGSG-LIYS-ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       345 ~~~~~~~-~l~s-~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ++|++++ .++. +..++.|.+||+.++....                                                
T Consensus       181 ~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~------------------------------------------------  212 (331)
T 3u4y_A          181 ITFTPDGNFAFVANLIGNSIGILETQNPENIT------------------------------------------------  212 (331)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEECSSTTSCE------------------------------------------------
T ss_pred             eEECCCCCEEEEEeCCCCeEEEEECCCCcccc------------------------------------------------
Confidence            7776665 2333 3345666666655432200                                                


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeE--EEeec
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKF--ITTLR  499 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~--~~~~~  499 (573)
                                                   ....+.. ...+..++|+|||++++++ ..++.|.+||..+++.  +..+.
T Consensus       213 -----------------------------~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~  262 (331)
T 3u4y_A          213 -----------------------------LLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFG  262 (331)
T ss_dssp             -----------------------------EEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEE
T ss_pred             -----------------------------eeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccc
Confidence                                         0111111 2345678999999976655 4578899999998876  33332


Q ss_pred             CC----cc---eEEEEEECCCCCEEEEEe-CCCcEEEEeCCcccc
Q psy2671         500 GH----VQ---AVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKI  536 (573)
Q Consensus       500 ~h----~~---~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~  536 (573)
                      .+    ..   ....++|+|||++|++++ .++.|++||+.....
T Consensus       263 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~  307 (331)
T 3u4y_A          263 HGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV  307 (331)
T ss_dssp             CCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred             cccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence            22    12   224589999999886655 466999999977543

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.7e-23  Score=225.04  Aligned_cols=319  Identities=12%  Similarity=0.107  Sum_probs=215.3

Q ss_pred             EEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671         115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR  194 (573)
Q Consensus       115 ~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (573)
                      +++|+|||++++++ .|++|++||+.++++...                                               
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~-----------------------------------------------   51 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTI-----------------------------------------------   51 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEE-----------------------------------------------
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEE-----------------------------------------------
Confidence            66899999766655 699999999988764311                                               


Q ss_pred             eccccccCCCCCCC---cEEEEEEcCCCCeEEEEeC---------CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         195 PVTRCTSSMPGHAE---AVISVKFSPNGRSLASGSG---------DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       195 ~~~~~~~~~~gh~~---~V~~~~fsp~g~~las~s~---------d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                              +.+|..   .+.+++|||||++||+++.         |++|++||+.+++.+.. ..-...+.+++|||||+
T Consensus        52 --------~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l~~~~~~~~~SPDG~  122 (719)
T 1z68_A           52 --------LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NELPRPIQYLCWSPVGS  122 (719)
T ss_dssp             --------ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCCCSSBCCEEECSSTT
T ss_pred             --------EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eecCcccccceECCCCC
Confidence                    011211   3779999999999998876         78999999999876211 11124588899999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccE-----------------EEEEecccccCCCCCEEEEEeCCC------
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI-----------------TALSWEPFHLNHQCRRFASSGKDG------  319 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v-----------------~~~~~~~~~~~~~~~~l~s~~~dg------  319 (573)
                      +|+++. ++.|++|++.+++.......++...|                 .++.|+|     ++++|++++.|.      
T Consensus       123 ~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-----DG~~la~~~~d~~~~~~~  196 (719)
T 1z68_A          123 KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-----NGKFLAYAEFNDTDIPVI  196 (719)
T ss_dssp             CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-----TSSEEEEEEEECTTSCEE
T ss_pred             EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-----CCCEEEEEEECCCCCceE
Confidence            999875 78999999988765432223333322                 3677766     788899887552      


Q ss_pred             ----------------------------cEEEEECCCCeEE---E-----EecCCCccEEEEEECCCcEEE-EEeCC---
Q psy2671         320 ----------------------------AIRIWDVILSQCV---R-----VLTSHTRSVTCIRWGGSGLIY-SASQD---  359 (573)
Q Consensus       320 ----------------------------~v~iwd~~~~~~~---~-----~~~~h~~~v~~~~~~~~~~l~-s~s~d---  359 (573)
                                                  .|++||+.+++..   .     .+.+|...+..++|++++.++ +....   
T Consensus       197 ~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~  276 (719)
T 1z68_A          197 AYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQN  276 (719)
T ss_dssp             EEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTT
T ss_pred             EeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccC
Confidence                                        7889999877642   2     234688889999999998544 43322   


Q ss_pred             -CeEEEEe----CCCCeeeEec----cCCcceee-----EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         360 -RTIKVWR----ASDGVMCRTL----EGHAHWVN-----TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       360 -~~i~vw~----~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                       ..|.+||    ..++.....+    .+|..++.     .++                                     +
T Consensus       277 ~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~  319 (719)
T 1z68_A          277 VSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPV-------------------------------------F  319 (719)
T ss_dssp             EEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCE-------------------------------------E
T ss_pred             eEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccE-------------------------------------E
Confidence             2488888    7776654444    34444443     223                                     3


Q ss_pred             CCCCcEEEE--EeCCC--eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCC--Ce-
Q psy2671         426 CPEGEKLVS--GSDDF--TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRI--GK-  493 (573)
Q Consensus       426 ~~~~~~l~s--g~~dg--~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~--~~-  493 (573)
                      +|+|+.++.  ...+|  .|.+||+.++.  ...+..+...+..+.++ +++.|+..+.+     +..++|.+..  +. 
T Consensus       320 spdg~~l~~~~~~~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~  396 (719)
T 1z68_A          320 SYDAISYYKIFSDKDGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPP  396 (719)
T ss_dssp             CTTSSCEEEEEECTTSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSC
T ss_pred             CCCCCeEEEEEEccCCceEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCC
Confidence            466765443  44555  57777876543  34555556667888877 88877766654     8889997653  32 


Q ss_pred             EEEeec----CCcceEEEEEECCCCCEEEE-EeCC--CcEEEEeCCcccc
Q psy2671         494 FITTLR----GHVQAVYMVAWSSDSRLLVS-GSAD--STLKVWNMKTKKI  536 (573)
Q Consensus       494 ~~~~~~----~h~~~v~~v~~s~dg~~las-~s~D--~~v~vwd~~~~~~  536 (573)
                      ....+.    +|...+..+.|+||+++++. ++.+  ..+.+||+.+++.
T Consensus       397 ~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~  446 (719)
T 1z68_A          397 SKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQE  446 (719)
T ss_dssp             CEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCE
T ss_pred             CceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCE
Confidence            123332    36667888999999998774 3333  4688999877664

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.91  E-value=1.6e-21  Score=191.85  Aligned_cols=273  Identities=13%  Similarity=0.120  Sum_probs=200.1

Q ss_pred             CcEEEEEEcCCCCeEEEEeC-------CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECC
Q psy2671         208 EAVISVKFSPNGRSLASGSG-------DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSS  279 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~-------d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~  279 (573)
                      ..+..++|+|+|+++++++.       ++.|.+||..+++.+..+... ..+.+++|+|+|++++.+ ..++.|.+||..
T Consensus        41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~  119 (353)
T 3vgz_A           41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK  119 (353)
T ss_dssp             SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence            46789999999999888774       568999999998877665533 336789999999966554 557999999999


Q ss_pred             CCceecccccCCc--------ccEEEEEecccccCCCCCEEEEEe--CCCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671         280 TGKQIGQPMRGHK--------QWITALSWEPFHLNHQCRRFASSG--KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       280 ~~~~~~~~~~~h~--------~~v~~~~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  349 (573)
                      +++.+.....++.        ..+.++.|.|     ++++++.++  .++.|.+||..+++....+..+...+.+++|++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-----dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~  194 (353)
T 3vgz_A          120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADD-----ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS  194 (353)
T ss_dssp             TCCEEEEEESCCCCCCSSCCCCEEEEEEEET-----TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET
T ss_pred             CCeeEEEEecCCCccccccCCCCCceEEECC-----CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC
Confidence            8876533222111        1266777765     556555554  588999999999988887775555677788877


Q ss_pred             Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       350 ~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      ++ .+++++.++.|.+||..++.....+...                                                 
T Consensus       195 dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~-------------------------------------------------  225 (353)
T 3vgz_A          195 EGKRLYTTNADGELITIDTADNKILSRKKLL-------------------------------------------------  225 (353)
T ss_dssp             TTTEEEEECTTSEEEEEETTTTEEEEEEECC-------------------------------------------------
T ss_pred             CCCEEEEEcCCCeEEEEECCCCeEEEEEEcC-------------------------------------------------
Confidence            65 5777777888888887665443221100                                                 


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CCcEEEEeCCCCeEEEeecCCcceEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DKSIKLWDGRIGKFITTLRGHVQAVYM  507 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~~~~~~~~~~~h~~~v~~  507 (573)
                                                 ..++...+..++|+|+|+.+++++. ++.|.+||..+++.+..+.....  ..
T Consensus       226 ---------------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~  276 (353)
T 3vgz_A          226 ---------------------------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LA  276 (353)
T ss_dssp             ---------------------------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CC
T ss_pred             ---------------------------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ce
Confidence                                       0012345778999999997776654 59999999999988877764432  56


Q ss_pred             EEECCCCCEEEEEe-CCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         508 VAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       508 v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      ++|+|||+++++++ .++.|.+||+.+++.+..+..+ ..+.+++|+|||++|+.+..+
T Consensus       277 ~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          277 VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ  334 (353)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred             EEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence            89999999665555 6899999999999887776644 468899999999977665544

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.91  E-value=4.2e-22  Score=194.50  Aligned_cols=285  Identities=12%  Similarity=0.110  Sum_probs=198.0

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecCCC-C-cEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCC----c
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHK-H-WVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGH----K  292 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~-~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h----~  292 (573)
                      +++++++.+++|.+||+.+++.+..+.... . .+.+++|+|||++++ +++.++.|.+||+.+++.+.....++    .
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            468999999999999999998877665322 2 378899999998765 55567899999999887653322222    1


Q ss_pred             ccEEEEEecccccCCCCCEEEEEe------------CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCC
Q psy2671         293 QWITALSWEPFHLNHQCRRFASSG------------KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQD  359 (573)
Q Consensus       293 ~~v~~~~~~~~~~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d  359 (573)
                      ..+..+.|.|     +++++++++            .++.|++||+.+++....+.. ...+.+++|++++ .++++  +
T Consensus        82 ~~~~~~~~s~-----dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~  153 (337)
T 1pby_B           82 KSLFGAALSP-----DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--G  153 (337)
T ss_dssp             ECTTCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred             ccccceEECC-----CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence            2344555554     677777775            579999999998887776654 3457788899887 46666  6


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE----EEEE
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK----LVSG  435 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~sg  435 (573)
                      +.|.+||+.++.....+..+... ..+.++++.......                           ...+..    ...+
T Consensus       154 ~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~---------------------------~~~~~~~~~~~~~~  205 (337)
T 1pby_B          154 RDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQ---------------------------HESSGVMATPFYTA  205 (337)
T ss_dssp             SSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCC---------------------------CTTTTEEEEEEEEE
T ss_pred             CeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeee---------------------------ccCCCceeeeeecc
Confidence            89999999988776555433200 001122221100000                           000000    1111


Q ss_pred             eCCC----------eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE
Q psy2671         436 SDDF----------TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV  505 (573)
Q Consensus       436 ~~dg----------~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v  505 (573)
                      ..++          .+.+||+.+.......+..+...+.+++|+|+|++++++  ++.|.+||..+++.+..+..+ ..+
T Consensus       206 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~  282 (337)
T 1pby_B          206 RKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSY  282 (337)
T ss_dssp             BTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCC
T ss_pred             ccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-Cce
Confidence            1112          688999887654433344556678899999999999988  799999999999888777644 356


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h  543 (573)
                      .+++|+|||++|++++.++.|++||+.+++.+..+..+
T Consensus       283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~  320 (337)
T 1pby_B          283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             CEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             eeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence            78999999999999999999999999998877666544

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.91  E-value=4.3e-22  Score=194.99  Aligned_cols=290  Identities=11%  Similarity=0.101  Sum_probs=189.5

Q ss_pred             EEEEeCCCeEEEEECC-CCe-eeEEecCCCCcEEEEEEcCCCCeEEEEeeC-CeEEEEECC--CCceec-ccccCCcccE
Q psy2671         222 LASGSGDTTVRFWDVT-TQT-PLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-GVIHAWDSS--TGKQIG-QPMRGHKQWI  295 (573)
Q Consensus       222 las~s~d~~i~iwd~~-~~~-~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g~i~vwd~~--~~~~~~-~~~~~h~~~v  295 (573)
                      +++++.|+.|++||+. +++ .......|...+.+++|+|+|++|++++.+ +.|.+|++.  ++.... ..+..+. .+
T Consensus         8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~   86 (343)
T 1ri6_A            8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SL   86 (343)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CC
T ss_pred             EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CC
Confidence            4455789999999985 332 122223466678999999999999998887 999999987  554221 1122222 56


Q ss_pred             EEEEecccccCCCCCEEEEEe-CCCcEEEEECC---CCeEEEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCC
Q psy2671         296 TALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI---LSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASD  369 (573)
Q Consensus       296 ~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~  369 (573)
                      ..++|.|     +++++++++ .++.|++||+.   ..+....+..+ ..+.+++|++++ .+++++ .++.|.+|++.+
T Consensus        87 ~~~~~s~-----dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~  160 (343)
T 1ri6_A           87 THISTDH-----QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSD  160 (343)
T ss_dssp             SEEEECT-----TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             cEEEEcC-----CCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecC
Confidence            6777765     566666555 48899999993   33444444443 357889999887 577776 899999999986


Q ss_pred             -CeeeEe----ccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE-eCCCeEE
Q psy2671         370 -GVMCRT----LEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG-SDDFTLF  442 (573)
Q Consensus       370 -~~~~~~----~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-~~dg~i~  442 (573)
                       +.....    ...+ ...+..+                                     .++|++++++.+ ..++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~pdg~~l~~~~~~~~~i~  203 (343)
T 1ri6_A          161 DGHLVAQDPAEVTTVEGAGPRHM-------------------------------------VFHPNEQYAYCVNELNSSVD  203 (343)
T ss_dssp             TSCEEEEEEEEEECSTTCCEEEE-------------------------------------EECTTSSEEEEEETTTTEEE
T ss_pred             CCceeeecccccccCCCCCcceE-------------------------------------EECCCCCEEEEEeCCCCEEE
Confidence             543211    1111 1112222                                     234677766544 5889999


Q ss_pred             EEcCCC--Cccc-eeeec----cc--cccEEEEEECCCCCEEE-EeeCCCcEEEEeCC--C--CeEEEeecCCcceEEEE
Q psy2671         443 LWNPEK--EKKS-LARMT----GH--QQLINCVEFSPDGRIIA-SASFDKSIKLWDGR--I--GKFITTLRGHVQAVYMV  508 (573)
Q Consensus       443 lwd~~~--~~~~-~~~~~----~h--~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~--~--~~~~~~~~~h~~~v~~v  508 (573)
                      +|++..  +... .....    ++  ...+..++|+|+|++|+ ++..++.|++||..  +  .+.+..+..+.. +..+
T Consensus       204 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~  282 (343)
T 1ri6_A          204 VWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGF  282 (343)
T ss_dssp             EEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCE
T ss_pred             EEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceE
Confidence            999854  2111 11111    11  23567899999998877 45579999999987  3  344555555444 7889


Q ss_pred             EECCCCCEEEEEe-CCCcEEEEeC--Ccccc--cccccCcCCCEEEEEEccCCC
Q psy2671         509 AWSSDSRLLVSGS-ADSTLKVWNM--KTKKI--EQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       509 ~~s~dg~~las~s-~D~~v~vwd~--~~~~~--~~~l~~h~~~v~~~~~s~d~~  557 (573)
                      +|+|||++|++++ .++.|.+|++  .+++.  +..+... ....+++|.|+.+
T Consensus       283 ~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~  335 (343)
T 1ri6_A          283 NVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG  335 (343)
T ss_dssp             EECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred             EECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence            9999999888887 6899999955  45533  3334332 3455777877654

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.90  E-value=1e-22  Score=214.66  Aligned_cols=267  Identities=13%  Similarity=0.058  Sum_probs=178.8

Q ss_pred             CCcEEEEEEcCCCCeEEEEeC-CCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEEEEee---CCeEEEEECCC-
Q psy2671         207 AEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLVSGCK---NGVIHAWDSST-  280 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~-d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~-  280 (573)
                      ..+|.+++|+|||++||+++. |++++||++.+++.. .+..|. ..+.+++|||| +.+++++.   +...++|.+.. 
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~   98 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS   98 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence            457999999999999999887 999999999776654 444444 68999999999 77777765   44455654432 


Q ss_pred             --CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC
Q psy2671         281 --GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ  358 (573)
Q Consensus       281 --~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~  358 (573)
                        +... .....+.  +...+|.|.   .++..+++++.+ .+.+||+                                
T Consensus        99 ~~g~~~-~l~~~~~--~~~~~~s~d---g~~~~~~s~~~~-~~~l~d~--------------------------------  139 (582)
T 3o4h_A           99 RPGEEQ-RLEAVKP--MRILSGVDT---GEAVVFTGATED-RVALYAL--------------------------------  139 (582)
T ss_dssp             STTCCE-ECTTSCS--BEEEEEEEC---SSCEEEEEECSS-CEEEEEE--------------------------------
T ss_pred             CCCccc-cccCCCC--ceeeeeCCC---CCeEEEEecCCC-CceEEEc--------------------------------
Confidence              2111 1111111  112233221   111122222222 2235544                                


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                               .++........+.   ..++                                     .+|+|+.+++++.+
T Consensus       140 ---------~~g~~~~l~~~~~---~~~~-------------------------------------~spDG~~la~~~~~  170 (582)
T 3o4h_A          140 ---------DGGGLRELARLPG---FGFV-------------------------------------SDIRGDLIAGLGFF  170 (582)
T ss_dssp             ---------ETTEEEEEEEESS---CEEE-------------------------------------EEEETTEEEEEEEE
T ss_pred             ---------cCCcEEEeecCCC---ceEE-------------------------------------ECCCCCEEEEEEEc
Confidence                     4333221111110   1122                                     22567777776666


Q ss_pred             ----CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC--cEEEEeCCCCeEEEeecCCcceEEEEE---
Q psy2671         439 ----FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK--SIKLWDGRIGKFITTLRGHVQAVYMVA---  509 (573)
Q Consensus       439 ----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~---  509 (573)
                          +.|++||+.++.  ...+.+|...+..++|||||+.|+++..++  .|++||..+++.. .+.+|...+..++   
T Consensus       171 ~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~  247 (582)
T 3o4h_A          171 GGGRVSLFTSNLSSGG--LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA  247 (582)
T ss_dssp             ETTEEEEEEEETTTCC--CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred             CCCCeEEEEEcCCCCC--ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence                678888877654  335677888899999999999999888888  8999999998877 7777776666666   


Q ss_pred             -----ECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCc---EEEcc
Q psy2671         510 -----WSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKV---LRLWQ  572 (573)
Q Consensus       510 -----~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~---i~iw~  572 (573)
                           |||||.++++++.|+++++|++  ++...   .+.+.|.+++|+ |++.+++++.+.+   +++|+
T Consensus       248 ~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d  312 (582)
T 3o4h_A          248 ITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP  312 (582)
T ss_dssp             EEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred             ccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence                 9999999999999999999999  55544   234678999999 9999998888754   55554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.90  E-value=5.1e-21  Score=188.22  Aligned_cols=270  Identities=12%  Similarity=0.082  Sum_probs=192.1

Q ss_pred             cccEEEEEEcCCCCeeEEeeC-------CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         110 AEAVISVKFSPNGRSLASGSG-------DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       110 ~~~V~~l~~s~~~~~lat~s~-------D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...+..++|+|+|+++++++.       ++.|.+||..+++.+....                                 
T Consensus        40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---------------------------------   86 (353)
T 3vgz_A           40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH---------------------------------   86 (353)
T ss_dssp             ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE---------------------------------
T ss_pred             ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe---------------------------------
Confidence            456788999999998888774       5689999998876442110                                 


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCC---------cE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKH---------WV  252 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~---------~V  252 (573)
                                             +...+.+++|+|+|++++ +...++.|.+||..+++.+..+..+..         .+
T Consensus        87 -----------------------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (353)
T 3vgz_A           87 -----------------------NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQP  143 (353)
T ss_dssp             -----------------------ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEE
T ss_pred             -----------------------cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCC
Confidence                                   012345788999999665 445579999999999988776655432         27


Q ss_pred             EEEEEcCCCCeEEEEe--eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671         253 LCIAWSPDSKQLVSGC--KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ  330 (573)
Q Consensus       253 ~~v~~s~dg~~l~sgs--~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  330 (573)
                      .+++|+|+|+++++++  .++.|.+||..+++.... +..+...+.++.|.|     ++++++.++.++.+.+||..+++
T Consensus       144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~s~-----dg~~l~~~~~~~~i~~~d~~~~~  217 (353)
T 3vgz_A          144 RELVADDATNTVYISGIGKESVIWVVDGGNIKLKTA-IQNTGKMSTGLALDS-----EGKRLYTTNADGELITIDTADNK  217 (353)
T ss_dssp             EEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEE-ECCCCTTCCCCEEET-----TTTEEEEECTTSEEEEEETTTTE
T ss_pred             ceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEE-ecCCCCccceEEECC-----CCCEEEEEcCCCeEEEEECCCCe
Confidence            8999999999888776  478999999998876533 232333455566654     67888888999999999999988


Q ss_pred             EEEEecC----CCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         331 CVRVLTS----HTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       331 ~~~~~~~----h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      ....+..    +...+..++|++++ .++.++ .++.|.+||..++.....+                            
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~----------------------------  269 (353)
T 3vgz_A          218 ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV----------------------------  269 (353)
T ss_dssp             EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE----------------------------
T ss_pred             EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE----------------------------
Confidence            7766543    44456677777655 344443 3466777766544322111                            


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee-CCCc
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKS  483 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~  483 (573)
                                                                          ....  ...++|+|+|+.+++++ .++.
T Consensus       270 ----------------------------------------------------~~~~--~~~~~~s~dg~~l~v~~~~~~~  295 (353)
T 3vgz_A          270 ----------------------------------------------------AAPE--SLAVLFNPARNEAYVTHRQAGK  295 (353)
T ss_dssp             ----------------------------------------------------ECSS--CCCEEEETTTTEEEEEETTTTE
T ss_pred             ----------------------------------------------------EcCC--CceEEECCCCCEEEEEECCCCe
Confidence                                                                1111  13589999999665554 7899


Q ss_pred             EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCC
Q psy2671         484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       484 i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      |.+||..+++.+..+..+ ..+..++|+|||++|+++..++
T Consensus       296 v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          296 VSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             EEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEECC
T ss_pred             EEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEccc
Confidence            999999999988887654 3678999999999877776553

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.89  E-value=1.7e-20  Score=203.19  Aligned_cols=347  Identities=11%  Similarity=0.100  Sum_probs=216.2

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      ...+++|+|||++++++  |++|++||+.++++.....+                                         
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~-----------------------------------------   54 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLEN-----------------------------------------   54 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECT-----------------------------------------
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEec-----------------------------------------
Confidence            35578999999999996  99999999998865321111                                         


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC---------CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD---------TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d---------~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                               ..+..+......++|||||++|+.++.+         +.+.+||+.+++.. .+..|...+...+|||||+
T Consensus        55 ---------~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~  124 (740)
T 4a5s_A           55 ---------STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGH  124 (740)
T ss_dssp             ---------TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTT
T ss_pred             ---------hhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCC
Confidence                     0111122233457899999999999876         55679999998754 4667778899999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEE-----------------EEEecccccCCCCCEEEEEeCCCc-EEEE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT-----------------ALSWEPFHLNHQCRRFASSGKDGA-IRIW  324 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~-----------------~~~~~~~~~~~~~~~l~s~~~dg~-v~iw  324 (573)
                      .||.+ .++.|++|++.++....-...++...+.                 ++.|+|     +|+.|+..+.|.+ +++|
T Consensus       125 ~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-----Dg~~la~~~~d~~~v~~~  198 (740)
T 4a5s_A          125 KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-----NGTFLAYAQFNDTEVPLI  198 (740)
T ss_dssp             CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-----TSSEEEEEEEECTTCCEE
T ss_pred             EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECC-----CCCEEEEEEEcccCCceE
Confidence            99887 5789999999887654333334433332                 366665     7888988775544 8888


Q ss_pred             ECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC---Ce--eeEecc------CCcceeeEEEeccCce
Q psy2671         325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD---GV--MCRTLE------GHAHWVNTLALSTDYL  393 (573)
Q Consensus       325 d~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~---~~--~~~~~~------~~~~~v~~~~~s~~~~  393 (573)
                      ++......   ..+...+..+.+...|.   .....+|.+||+.+   +.  ....+.      +|...+..+++++|  
T Consensus       199 ~~~~~~~~---~~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd--  270 (740)
T 4a5s_A          199 EYSFYSDE---SLQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ--  270 (740)
T ss_dssp             EEEECCST---TCSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET--
T ss_pred             EEEeecCC---CCCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC--
Confidence            75321100   02444556666654431   01223688999988   72  222232      36677777777755  


Q ss_pred             eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe----CCCeEEEEcCCCCc----c-ceeee--cccccc
Q psy2671         394 MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS----DDFTLFLWNPEKEK----K-SLARM--TGHQQL  462 (573)
Q Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~----~dg~i~lwd~~~~~----~-~~~~~--~~h~~~  462 (573)
                                                         |+.++...    .+..|++||+.++.    . ....+  .+|...
T Consensus       271 -----------------------------------g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~  315 (740)
T 4a5s_A          271 -----------------------------------ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW  315 (740)
T ss_dssp             -----------------------------------TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred             -----------------------------------CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence                                               44333322    23478999987654    1 11111  345444


Q ss_pred             EE-----EEEECCCCCEEE-Eee-CCC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE-EEeC----CCcEEE
Q psy2671         463 IN-----CVEFSPDGRIIA-SAS-FDK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV-SGSA----DSTLKV  528 (573)
Q Consensus       463 v~-----~v~~sp~g~~la-s~s-~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la-s~s~----D~~v~v  528 (573)
                      |.     .++|+|||+.|+ ..+ .+|  .|.+||...++......+ .-.+..+. ++|++.|+ +++.    .+...|
T Consensus       316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~l  393 (740)
T 4a5s_A          316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNL  393 (740)
T ss_dssp             SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEE-EECSSEEEEEESCGGGCTTCBEE
T ss_pred             EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC-CEEEEEEE-EEeCCEEEEEEecCCCCCceeEE
Confidence            43     688999999877 555 333  588889887765544444 33444433 24466554 4443    233444


Q ss_pred             E--eCCccccccccc----CcCCCEEEEEEccCCCEEEEe
Q psy2671         529 W--NMKTKKIEQDLP----GHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       529 w--d~~~~~~~~~l~----~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      |  ++.+++....+.    +.......+.||||+++++..
T Consensus       394 y~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~  433 (740)
T 4a5s_A          394 YKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLR  433 (740)
T ss_dssp             EEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEE
T ss_pred             EEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEE
Confidence            4  555443321222    234568899999999987644

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.89  E-value=9e-22  Score=213.03  Aligned_cols=311  Identities=11%  Similarity=0.085  Sum_probs=206.9

Q ss_pred             EEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCC---cEEEEEEcCCCCeEEEEee---------CCeEEEEECC
Q psy2671         212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKH---WVLCIAWSPDSKQLVSGCK---------NGVIHAWDSS  279 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~---~V~~v~~s~dg~~l~sgs~---------dg~i~vwd~~  279 (573)
                      +++|+|||+++++ +.|++|++||+.+++....+.+|..   .+.+++|||||++|++++.         ++.|++||+.
T Consensus        20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            6789999965554 5699999999999887766655543   3889999999999998876         7899999999


Q ss_pred             CCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCccE---------------
Q psy2671         280 TGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRSV---------------  342 (573)
Q Consensus       280 ~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v---------------  342 (573)
                      +++.+. ..+   ...+..++|+|     +++.|+.+. ++.|++|++.+++..+.. .++...+               
T Consensus        99 ~g~~~~~~~l---~~~~~~~~~SP-----DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~  169 (719)
T 1z68_A           99 NGEFVRGNEL---PRPIQYLCWSP-----VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA  169 (719)
T ss_dssp             TTEECCSSCC---CSSBCCEEECS-----STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred             CCccccceec---CcccccceECC-----CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence            886521 112   23466777776     678888875 789999999887765433 2333322               


Q ss_pred             --EEEEECCCc-EEEEEeCCC----------------------------------eEEEEeCCCCeee--------Eecc
Q psy2671         343 --TCIRWGGSG-LIYSASQDR----------------------------------TIKVWRASDGVMC--------RTLE  377 (573)
Q Consensus       343 --~~~~~~~~~-~l~s~s~d~----------------------------------~i~vw~~~~~~~~--------~~~~  377 (573)
                        .++.|+++| .|+.++.|.                                  .|.+||+.++...        ..+.
T Consensus       170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~  249 (719)
T 1z68_A          170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA  249 (719)
T ss_dssp             SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred             CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence              489999998 577766542                                  5666776655431        1123


Q ss_pred             CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----CeEEEEc----CCCC
Q psy2671         378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----FTLFLWN----PEKE  449 (573)
Q Consensus       378 ~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~i~lwd----~~~~  449 (573)
                      +|...+..++++                                     |++..+++....    ..|.+||    ..++
T Consensus       250 ~~~~~~~~~~~S-------------------------------------pD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g  292 (719)
T 1z68_A          250 SSDYYFSWLTWV-------------------------------------TDERVCLQWLKRVQNVSVLSICDFREDWQTW  292 (719)
T ss_dssp             TSCEEEEEEEES-------------------------------------SSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred             CCcceEEEeEEe-------------------------------------CCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence            455555555554                                     555555553322    3478888    6554


Q ss_pred             ccceeee----ccccccEE-----EEEECCCCCEEEE--eeCCC--cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE
Q psy2671         450 KKSLARM----TGHQQLIN-----CVEFSPDGRIIAS--ASFDK--SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL  516 (573)
Q Consensus       450 ~~~~~~~----~~h~~~v~-----~v~~sp~g~~las--~s~dg--~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~  516 (573)
                      .. ....    .+|...+.     .++|+|||+.|+.  +..+|  .|.+||..+++ ...+..+...+..+.++ +++.
T Consensus       293 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~  369 (719)
T 1z68_A          293 DC-PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDS  369 (719)
T ss_dssp             EC-CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSE
T ss_pred             ce-EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCE
Confidence            32 2222    35666665     7899999996554  44555  57777877766 44555555567777777 8887


Q ss_pred             EEEEeCC-----CcEEEEeCCc--ccc-ccc----ccCcCCCEEEEEEccCCCEEEE-eeCC--CcEEEcc
Q psy2671         517 LVSGSAD-----STLKVWNMKT--KKI-EQD----LPGHGDEVYAVDWAPDGEKVAS-GGKD--KVLRLWQ  572 (573)
Q Consensus       517 las~s~D-----~~v~vwd~~~--~~~-~~~----l~~h~~~v~~~~~s~d~~~l~s-~~~d--~~i~iw~  572 (573)
                      |+..+.+     +..++|.+..  +.. ...    +.+|...+..+.|+||+++|+. ++.+  ..+++|+
T Consensus       370 i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d  440 (719)
T 1z68_A          370 LFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHD  440 (719)
T ss_dssp             EEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEEC
T ss_pred             EEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEE
Confidence            7766654     7889998753  321 122    3346677889999999998774 4433  3455554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.89  E-value=5.8e-21  Score=186.92  Aligned_cols=266  Identities=14%  Similarity=0.213  Sum_probs=176.5

Q ss_pred             CeEEE-EeeCCeEEEEECC-CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-CcEEEEECC--CCe--EEEE
Q psy2671         262 KQLVS-GCKNGVIHAWDSS-TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-GAIRIWDVI--LSQ--CVRV  334 (573)
Q Consensus       262 ~~l~s-gs~dg~i~vwd~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-g~v~iwd~~--~~~--~~~~  334 (573)
                      +++++ ++.|+.|++|++. ++.........+...+..++|.|     +++++++++.+ +.|++|++.  .+.  .+..
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSP-----DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE   79 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECT-----TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECC-----CCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence            34444 4789999999985 33221111223555667777765     66778887776 999999987  444  3334


Q ss_pred             ecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCe---eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         335 LTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGV---MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      +..+. .+.+++|++++ .+++++ .++.|.+|++.++.   ....+..+. .+..                        
T Consensus        80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~------------------------  133 (343)
T 1ri6_A           80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD-GCHS------------------------  133 (343)
T ss_dssp             EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT-TBCC------------------------
T ss_pred             cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC-CceE------------------------
Confidence            44444 77899999887 465555 48899999984332   222222111 1111                        


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccce--e--eec-cccccEEEEEECCCCCEEEEe-eCCC
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSL--A--RMT-GHQQLINCVEFSPDGRIIASA-SFDK  482 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~--~--~~~-~h~~~v~~v~~sp~g~~las~-s~dg  482 (573)
                                   ..++|+++.+++++ .++.|++||+.......  .  ... .....+.+++|+|+|++++++ ..++
T Consensus       134 -------------~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~  200 (343)
T 1ri6_A          134 -------------ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS  200 (343)
T ss_dssp             -------------CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred             -------------EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence                         23457788777777 89999999987622221  1  122 233468899999999977655 4889


Q ss_pred             cEEEEeCCC--CeE--EEee---cCC---cceEEEEEECCCCCEEE-EEeCCCcEEEEeCC--c--ccccccccCcCCCE
Q psy2671         483 SIKLWDGRI--GKF--ITTL---RGH---VQAVYMVAWSSDSRLLV-SGSADSTLKVWNMK--T--KKIEQDLPGHGDEV  547 (573)
Q Consensus       483 ~i~lwd~~~--~~~--~~~~---~~h---~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~--~--~~~~~~l~~h~~~v  547 (573)
                      .|.+||...  ++.  ...+   ...   ...+..++|+|||++|+ ++..++.|++|++.  +  .+.+..+..+.. +
T Consensus       201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~  279 (343)
T 1ri6_A          201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-P  279 (343)
T ss_dssp             EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-C
T ss_pred             EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-c
Confidence            999999853  432  2222   211   23567899999999877 45579999999998  2  234444554444 8


Q ss_pred             EEEEEccCCCEEEEee-CCCcEEEcc
Q psy2671         548 YAVDWAPDGEKVASGG-KDKVLRLWQ  572 (573)
Q Consensus       548 ~~~~~s~d~~~l~s~~-~d~~i~iw~  572 (573)
                      .+++|+|++++|++++ .++.|.+|+
T Consensus       280 ~~~~~s~dg~~l~~~~~~~~~v~v~~  305 (343)
T 1ri6_A          280 RGFNVDHSGKYLIAAGQKSHHISVYE  305 (343)
T ss_dssp             CCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred             ceEEECCCCCEEEEecCCCCeEEEEE
Confidence            8999999999888877 679999994

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.88  E-value=9.8e-22  Score=207.21  Aligned_cols=268  Identities=12%  Similarity=0.061  Sum_probs=181.4

Q ss_pred             ccccEEEEEEcCCCCeeEEeeC-CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         109 HAEAVISVKFSPNGRSLASGSG-DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~-D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      +..+|.+++|+|||++||+++. |++++||++.++.+.                                          
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~------------------------------------------   57 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV------------------------------------------   57 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE------------------------------------------
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE------------------------------------------
Confidence            3557999999999999999987 999999998655321                                          


Q ss_pred             eeeEEEeeccccccCCCCCC-CcEEEEEEcCCCCeEEEEeC---CCeEEEEECCC---CeeeEEecCCCCcEEEEEEcCC
Q psy2671         188 QAVFQVRPVTRCTSSMPGHA-EAVISVKFSPNGRSLASGSG---DTTVRFWDVTT---QTPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~-~~V~~~~fsp~g~~las~s~---d~~i~iwd~~~---~~~~~~~~~h~~~V~~v~~s~d  260 (573)
                                    .+..|. ..|.+++|||| +.+++++.   +...+||.+..   +... .+..+. .+...+|+||
T Consensus        58 --------------~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~d  120 (582)
T 3o4h_A           58 --------------KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDT  120 (582)
T ss_dssp             --------------ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEEC
T ss_pred             --------------eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCC
Confidence                          122333 68899999999 77777765   55566665432   2222 333222 2446688888


Q ss_pred             CCe--EEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCCCeEEEE
Q psy2671         261 SKQ--LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVILSQCVRV  334 (573)
Q Consensus       261 g~~--l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~  334 (573)
                      |+.  +++++.+ .+.+||+.+++...  +..+..  .++.|+|     +|+.+++++.+    +.|++||+.+++.. .
T Consensus       121 g~~~~~~s~~~~-~~~l~d~~~g~~~~--l~~~~~--~~~~~sp-----DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~  189 (582)
T 3o4h_A          121 GEAVVFTGATED-RVALYALDGGGLRE--LARLPG--FGFVSDI-----RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-V  189 (582)
T ss_dssp             SSCEEEEEECSS-CEEEEEEETTEEEE--EEEESS--CEEEEEE-----ETTEEEEEEEEETTEEEEEEEETTTCCCE-E
T ss_pred             CCeEEEEecCCC-CceEEEccCCcEEE--eecCCC--ceEEECC-----CCCEEEEEEEcCCCCeEEEEEcCCCCCce-E
Confidence            864  3444444 45599998876432  112222  4556655     78889987776    77888998776654 5


Q ss_pred             ecCCCccEEEEEECCCc-EEEEEeCCC--eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         335 LTSHTRSVTCIRWGGSG-LIYSASQDR--TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~-~l~s~s~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      +..|...+..++|+++| .|+++..++  .|.+||+.++... .+                                   
T Consensus       190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-----------------------------------  233 (582)
T 3o4h_A          190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-----------------------------------  233 (582)
T ss_dssp             ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-----------------------------------
T ss_pred             eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-----------------------------------
Confidence            66777777888888776 455555666  6666666554332 22                                   


Q ss_pred             hhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccE--------EEEEECCCCCEEEEeeCCCc
Q psy2671         412 EESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLI--------NCVEFSPDGRIIASASFDKS  483 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v--------~~v~~sp~g~~las~s~dg~  483 (573)
                                                                   .+|...+        ....|+|||+++++++.|++
T Consensus       234 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~  268 (582)
T 3o4h_A          234 ---------------------------------------------ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR  268 (582)
T ss_dssp             ---------------------------------------------CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE
T ss_pred             ---------------------------------------------cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc
Confidence                                                         2222222        23449999999999999999


Q ss_pred             EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCc---EEEEeCCc
Q psy2671         484 IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADST---LKVWNMKT  533 (573)
Q Consensus       484 i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~---v~vwd~~~  533 (573)
                      +++|+.  ++....   +...+.+++|+ |++++++++.+.+   +.+|+..+
T Consensus       269 ~~l~~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~  315 (582)
T 3o4h_A          269 SAVFID--GERVEA---PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE  315 (582)
T ss_dssp             EEEEET--TEEECC---CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred             EEEEEE--CCeecc---CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence            999998  765543   34578899999 9999999887754   77777654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.88  E-value=1.7e-20  Score=183.06  Aligned_cols=272  Identities=14%  Similarity=0.084  Sum_probs=185.5

Q ss_pred             CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671         123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS  202 (573)
Q Consensus       123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (573)
                      +++++++.|++|++||..+++.+....                                                     
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~-----------------------------------------------------   28 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVIT-----------------------------------------------------   28 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEE-----------------------------------------------------
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEE-----------------------------------------------------
Confidence            578999999999999998875432110                                                     


Q ss_pred             CCCCCC-cEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecC-C----CCcEEEEEEcCCCCeEEEEe-------
Q psy2671         203 MPGHAE-AVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEG-H----KHWVLCIAWSPDSKQLVSGC-------  268 (573)
Q Consensus       203 ~~gh~~-~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~-h----~~~V~~v~~s~dg~~l~sgs-------  268 (573)
                       .++.. .+.+++|+|+|+++ ++++.++.|.+||+.+++.+..+.. +    ...+.+++|+|||++|++++       
T Consensus        29 -~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~  107 (337)
T 1pby_B           29 -IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL  107 (337)
T ss_dssp             -CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred             -cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccc
Confidence             01211 35678999999876 4556688999999999887765542 2    12467899999999998886       


Q ss_pred             -----eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC--cc
Q psy2671         269 -----KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT--RS  341 (573)
Q Consensus       269 -----~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~--~~  341 (573)
                           .++.|.+||+.+++..... .. ...+..+.|.|     ++++++++  ++.|++||+.+++....+..+.  ..
T Consensus       108 ~~~~~~~~~i~v~d~~~~~~~~~~-~~-~~~~~~~~~s~-----dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~  178 (337)
T 1pby_B          108 THFEVQPTRVALYDAETLSRRKAF-EA-PRQITMLAWAR-----DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAE  178 (337)
T ss_dssp             SCEEECCCEEEEEETTTTEEEEEE-EC-CSSCCCEEECT-----TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTT
T ss_pred             ccccccCceEEEEECCCCcEEEEE-eC-CCCcceeEECC-----CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCC
Confidence                 5799999999887654322 11 22345566654     56767766  6899999999988877665443  22


Q ss_pred             EEEEEECCCcE-EEEEe-CCC-----------------------eEEEEeCCCCeee-EeccCCcceeeEEEeccCceeE
Q psy2671         342 VTCIRWGGSGL-IYSAS-QDR-----------------------TIKVWRASDGVMC-RTLEGHAHWVNTLALSTDYLMR  395 (573)
Q Consensus       342 v~~~~~~~~~~-l~s~s-~d~-----------------------~i~vw~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~~  395 (573)
                      +   .|++++. ++..+ .++                       .|.+||..++... ..+..+...+..++        
T Consensus       179 ~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~--------  247 (337)
T 1pby_B          179 T---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTA--------  247 (337)
T ss_dssp             T---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEE--------
T ss_pred             c---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEE--------
Confidence            2   4555542 32222 222                       4678888776543 11112222222233        


Q ss_pred             EEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE
Q psy2671         396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII  475 (573)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l  475 (573)
                                                   .+|++++++++  ++.|++||+.+.+. ...+.. ...+.+++|+|+|++|
T Consensus       248 -----------------------------~s~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l  294 (337)
T 1pby_B          248 -----------------------------VNPAKTRAFGA--YNVLESFDLEKNAS-IKRVPL-PHSYYSVNVSTDGSTV  294 (337)
T ss_dssp             -----------------------------ECTTSSEEEEE--ESEEEEEETTTTEE-EEEEEC-SSCCCEEEECTTSCEE
T ss_pred             -----------------------------ECCCCCEEEEe--CCeEEEEECCCCcC-cceecC-CCceeeEEECCCCCEE
Confidence                                         34678888877  79999999876543 333332 2457899999999999


Q ss_pred             EEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         476 ASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       476 as~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      ++++.++.|++||..+++.+..+..+
T Consensus       295 ~~~~~~~~i~v~d~~~~~~~~~~~~~  320 (337)
T 1pby_B          295 WLGGALGDLAAYDAETLEKKGQVDLP  320 (337)
T ss_dssp             EEESBSSEEEEEETTTCCEEEEEECG
T ss_pred             EEEcCCCcEEEEECcCCcEEEEEEcC
Confidence            99999999999999999888777654

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.88  E-value=1.4e-20  Score=184.61  Aligned_cols=298  Identities=15%  Similarity=0.106  Sum_probs=192.3

Q ss_pred             EEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceeccccc
Q psy2671         212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      .++++++++++++++.+++|.+||..+++.+..+..+. ..+..++|+|||++++ ++..++.|.+||+.+++.......
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~   83 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   83 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence            45678889999999999999999999998877766443 2467899999998765 455789999999998876533222


Q ss_pred             CC-----cccEEEEEecccccCCCCCEEEEEeCC------------CcEEEEECCCCeE---EEEecCCCccEEEEEECC
Q psy2671         290 GH-----KQWITALSWEPFHLNHQCRRFASSGKD------------GAIRIWDVILSQC---VRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       290 ~h-----~~~v~~~~~~~~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~---~~~~~~h~~~v~~~~~~~  349 (573)
                      ++     ...+..+.|.|     +++++++++.+            +.|.+||+.+++.   +..+.. ...+.+++|++
T Consensus        84 ~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~  157 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISP-----DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAAD  157 (349)
T ss_dssp             CCSTTEEEECSSCEEECT-----TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECT
T ss_pred             ccccccccccccceEECC-----CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECC
Confidence            22     22244555554     67888888765            8999999987432   233333 33578889998


Q ss_pred             CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-
Q psy2671         350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-  428 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  428 (573)
                      ++.++.++.+  |.+||..++.....+..+...... ...++..          ..+........  ..........++ 
T Consensus       158 dg~l~~~~~~--i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~d~  222 (349)
T 1jmx_B          158 DGSLYVAGPD--IYKMDVKTGKYTVALPLRNWNRKG-YSAPDVL----------YFWPHQSPRHE--FSMLYTIARFKDD  222 (349)
T ss_dssp             TSCEEEESSS--EEEECTTTCCEEEEECSTTCCCTT-BCCCBCC----------CCCCCCCTTCE--EEEEEEEEEC---
T ss_pred             CCcEEEccCc--EEEEeCCCCceeccccccccCCcc-ccCccce----------eeecCCCccee--EEeeeeeeecCCC
Confidence            8877776544  999999988776655432100000 0000000          00000000000  000000000000 


Q ss_pred             ----------CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC-CCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         429 ----------GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP-DGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       429 ----------~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp-~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                ..++.....++.+++|+.          ..+...+..++|+| +|++++++  ++.|.+||..+++.+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~  290 (349)
T 1jmx_B          223 KQDPATADLLYGYLSVDLKTGKTHTQEF----------ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA  290 (349)
T ss_dssp             ----CCCEEEEEEEEEETTTCCEEEEEE----------EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE
T ss_pred             cCCccccccceeEEEEeccCCcEEeccc----------ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE
Confidence                      011222333444555443          22445688999999 99999988  88999999999988777


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h  543 (573)
                      +..+ ..+.+++|+|||++|++++.++.|++||+.+++.+..++..
T Consensus       291 ~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          291 ANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             EcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            7543 34678999999999998888999999999988877665433

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.86  E-value=2.1e-18  Score=170.22  Aligned_cols=264  Identities=11%  Similarity=0.107  Sum_probs=171.8

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCC----CeEEEEECCC--Ce--eeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEE
Q psy2671         207 AEAVISVKFSPNGRSLASGSGD----TTVRFWDVTT--QT--PLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWD  277 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d----~~i~iwd~~~--~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd  277 (573)
                      ...+..++|+|||++|++++.+    +.|.+|++..  ++  .+.....+......+++  ++++|++++ .++.|.+|+
T Consensus        49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~  126 (361)
T 3scy_A           49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP  126 (361)
T ss_dssp             CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred             CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence            3456678999999999999886    7999998765  43  33344445556777888  888887776 578999999


Q ss_pred             CCCCceeccc-------------ccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeE------------
Q psy2671         278 SSTGKQIGQP-------------MRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQC------------  331 (573)
Q Consensus       278 ~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~------------  331 (573)
                      +.....+...             ...+...+.++.|.|     ++++++.+ ..++.|++|++.....            
T Consensus       127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-----dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~  201 (361)
T 3scy_A          127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-----DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT  201 (361)
T ss_dssp             BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-----TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred             eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-----CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence            8754332111             011223456777765     66755544 4588999998764331            


Q ss_pred             -EEEecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         332 -VRVLTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       332 -~~~~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                       ......+......++|++++ .+++++ .++.|.+|++.++......                                
T Consensus       202 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~--------------------------------  249 (361)
T 3scy_A          202 PEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ--------------------------------  249 (361)
T ss_dssp             EEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE--------------------------------
T ss_pred             ccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE--------------------------------
Confidence             11122334556788888887 455555 5788888887644321000                                


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC--CCcEEE
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF--DKSIKL  486 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~--dg~i~l  486 (573)
                                                                 .......+......++|+|||++|+++..  ++.|.+
T Consensus       250 -------------------------------------------~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v  286 (361)
T 3scy_A          250 -------------------------------------------TVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAI  286 (361)
T ss_dssp             -------------------------------------------EEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEE
T ss_pred             -------------------------------------------EEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEE
Confidence                                                       00001112233578999999998877665  489999


Q ss_pred             EeCC--CCe--EEEeecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeC--Ccccccccc-cCcCCCEEEEEEc
Q psy2671         487 WDGR--IGK--FITTLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNM--KTKKIEQDL-PGHGDEVYAVDWA  553 (573)
Q Consensus       487 wd~~--~~~--~~~~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~--~~~~~~~~l-~~h~~~v~~~~~s  553 (573)
                      |++.  +++  .+..+.. ...+..++|+|||++|++++ .++.|.+|++  .++++.... ..+...+.|+.|.
T Consensus       287 ~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~  360 (361)
T 3scy_A          287 FKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV  360 (361)
T ss_dssp             EEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred             EEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence            9985  444  3444443 34567899999999988887 6789999654  566654432 2244578888886

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.85  E-value=3.9e-20  Score=186.45  Aligned_cols=239  Identities=15%  Similarity=0.145  Sum_probs=157.3

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----------eeeE-----EecCCCCcEEEEEEcCCCCeEE----EE
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----------TPLF-----KCEGHKHWVLCIAWSPDSKQLV----SG  267 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----------~~~~-----~~~~h~~~V~~v~~s~dg~~l~----sg  267 (573)
                      ...+..+++++++.++++++.|+ +++|+....          ..+.     ....+...|.+++|+|+|++|+    +|
T Consensus        36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg  114 (434)
T 2oit_A           36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS  114 (434)
T ss_dssp             CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred             CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence            34578899999999999999887 899874210          0111     1123566799999999999999    78


Q ss_pred             eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW  347 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~  347 (573)
                      +.|+.|++||+.++..      +...              ..+                 .-.....+.+|...|.+++|
T Consensus       115 s~d~~v~iwd~~~~~~------~~~~--------------~~~-----------------~~~~~~~~~~h~~~V~~v~~  157 (434)
T 2oit_A          115 EYGSIIAFFDVRTFSN------EAKQ--------------QKR-----------------PFAYHKLLKDAGGMVIDMKW  157 (434)
T ss_dssp             TTEEEEEEEEHHHHHC------TTCS--------------SCC-----------------CSEEEECCCSGGGSEEEEEE
T ss_pred             CCCceEEEEEcccccc------CCcC--------------Ccc-----------------eeeeeeccCCCCCceEEEEE
Confidence            8999999999864310      0000              000                 00112344567778888888


Q ss_pred             CCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         348 GGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       348 ~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      +++  ..+++++.|++|++||++++..                                                     
T Consensus       158 ~p~~~~~las~s~Dg~v~iwD~~~~~~-----------------------------------------------------  184 (434)
T 2oit_A          158 NPTVPSMVAVCLADGSIAVLQVTETVK-----------------------------------------------------  184 (434)
T ss_dssp             CSSCTTEEEEEETTSCEEEEEESSSEE-----------------------------------------------------
T ss_pred             CCCCCCEEEEEECCCeEEEEEcCCCcc-----------------------------------------------------
Confidence            764  2566667777777776554311                                                     


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC----
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH----  501 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h----  501 (573)
                                                 .....+|...|.+++|+|+|++|++|+.||+|++||.+ ++....+..|    
T Consensus       185 ---------------------------~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~  236 (434)
T 2oit_A          185 ---------------------------VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE  236 (434)
T ss_dssp             ---------------------------EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCC
T ss_pred             ---------------------------eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccC
Confidence                                       11223467789999999999999999999999999998 5555555433    


Q ss_pred             ---cceEEEEEECCCCCEEEEE-eCCC------cEEEEeCCccccc-----ccc-------cCcCCCEEEEEEccCCCEE
Q psy2671         502 ---VQAVYMVAWSSDSRLLVSG-SADS------TLKVWNMKTKKIE-----QDL-------PGHGDEVYAVDWAPDGEKV  559 (573)
Q Consensus       502 ---~~~v~~v~~s~dg~~las~-s~D~------~v~vwd~~~~~~~-----~~l-------~~h~~~v~~~~~s~d~~~l  559 (573)
                         ...|.+++|++++.++++. +.||      .+++|++...+..     ..+       .+...+-..+.+-+|.+.+
T Consensus       237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~  316 (434)
T 2oit_A          237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLV  316 (434)
T ss_dssp             TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEE
T ss_pred             CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEE
Confidence               3489999999998887653 3443      3899999764211     111       1222333344455777776


Q ss_pred             EEeeC
Q psy2671         560 ASGGK  564 (573)
Q Consensus       560 ~s~~~  564 (573)
                      ++++.
T Consensus       317 ~v~s~  321 (434)
T 2oit_A          317 LAASA  321 (434)
T ss_dssp             EEEET
T ss_pred             EEecC
Confidence            65554

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.85  E-value=2e-20  Score=188.57  Aligned_cols=214  Identities=14%  Similarity=0.165  Sum_probs=155.4

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      +...+..+++++++.++++++.|+ ++||+...........                         .......  ...  
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~-------------------------~~~~~~~--~~~--   84 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPG-------------------------DDPNKIV--DKV--   84 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTT-------------------------CCTTCEE--ECC--
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccc-------------------------cCccccc--ccC--
Confidence            345688999999999999999988 9999864321100000                         0000000  000  


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEE----EEeCCCeEEEEECCCC--------ee---eEEecCCCCcEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA----SGSGDTTVRFWDVTTQ--------TP---LFKCEGHKHWVL  253 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~la----s~s~d~~i~iwd~~~~--------~~---~~~~~~h~~~V~  253 (573)
                                 ......|...|.+++|+|+|++||    +|+.|++|+|||+.++        ++   +..+.+|...|.
T Consensus        85 -----------~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~  153 (434)
T 2oit_A           85 -----------QGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI  153 (434)
T ss_dssp             -----------CCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE
T ss_pred             -----------ccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE
Confidence                       000113667899999999999999    7889999999998654        22   345668999999


Q ss_pred             EEEEcCC-CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         254 CIAWSPD-SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       254 ~v~~s~d-g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      +++|+|+ +.+|++++.||+|++||++++... ....+|...|.+++|+|     ++++|++++.||+|++||.. ++..
T Consensus       154 ~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~~~~~~v~~v~wsp-----dg~~lasgs~dg~v~iwd~~-~~~~  226 (434)
T 2oit_A          154 DMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATLPSTVAVTSVCWSP-----KGKQLAVGKQNGTVVQYLPT-LQEK  226 (434)
T ss_dssp             EEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEECGGGCEEEEEECT-----TSSCEEEEETTSCEEEECTT-CCEE
T ss_pred             EEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eeccCCCCceeEEEEcC-----CCCEEEEEcCCCcEEEEccC-Cccc
Confidence            9999998 789999999999999999988543 23456889999999987     57889999999999999998 4555


Q ss_pred             EEecCC-------CccEEEEEECCCcEEE--EEeCCC------eEEEEeCCCC
Q psy2671         333 RVLTSH-------TRSVTCIRWGGSGLIY--SASQDR------TIKVWRASDG  370 (573)
Q Consensus       333 ~~~~~h-------~~~v~~~~~~~~~~l~--s~s~d~------~i~vw~~~~~  370 (573)
                      ..+..|       ...|.++.|.+++.++  ..+.||      .+++|+++..
T Consensus       227 ~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          227 KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            544433       3489999999887544  233443      3889998753

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.85  E-value=1.4e-19  Score=180.54  Aligned_cols=293  Identities=13%  Similarity=0.109  Sum_probs=193.3

Q ss_pred             EEECCCCeeeEEecCCCCcEEE-----EEEcCCCCeEEEEee-CC--eEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         233 FWDVTTQTPLFKCEGHKHWVLC-----IAWSPDSKQLVSGCK-NG--VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       233 iwd~~~~~~~~~~~~h~~~V~~-----v~~s~dg~~l~sgs~-dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                      .+|..++..+..+..|......     .+|||||++|+.++. ++  .|.+||+.+++.. +...++...+....|.|  
T Consensus        14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~-~lt~~~~~~~~~~~~sp--   90 (388)
T 3pe7_A           14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT-QLTEGRGDNTFGGFLSP--   90 (388)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE-ECCCSSCBCSSSCEECT--
T ss_pred             EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE-EeeeCCCCCccceEEcC--
Confidence            4567777777888877766666     789999999998887 66  4888899887654 33445544443445554  


Q ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEE--CCCcEEEEE-----------------------eCC
Q psy2671         305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW--GGSGLIYSA-----------------------SQD  359 (573)
Q Consensus       305 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~l~s~-----------------------s~d  359 (573)
                         +++.|+.++.++.+++||+.+++.......+...+....|  ++++..+.+                       ..+
T Consensus        91 ---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (388)
T 3pe7_A           91 ---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC  167 (388)
T ss_dssp             ---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC
T ss_pred             ---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc
Confidence               7889999999999999999998877766666665544443  666643332                       244


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDD  438 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~d  438 (573)
                      ..|.+||+.++.... +..+...+..++++                                     | +|..|+..+.+
T Consensus       168 ~~l~~~d~~~g~~~~-l~~~~~~~~~~~~s-------------------------------------p~dg~~l~~~~~~  209 (388)
T 3pe7_A          168 CRLMRVDLKTGESTV-ILQENQWLGHPIYR-------------------------------------PYDDSTVAFCHEG  209 (388)
T ss_dssp             EEEEEEETTTCCEEE-EEEESSCEEEEEEE-------------------------------------TTEEEEEEEEECS
T ss_pred             ceEEEEECCCCceEE-eecCCccccccEEC-------------------------------------CCCCCEEEEEEec
Confidence            678889988775433 22333344445544                                     4 45666655543


Q ss_pred             ------CeEEEEcCCCCccceeeecccc--ccEEEEEECCCCCEEEEeeC-CC----cEEEEeCCCCeE--EEeecCCcc
Q psy2671         439 ------FTLFLWNPEKEKKSLARMTGHQ--QLINCVEFSPDGRIIASASF-DK----SIKLWDGRIGKF--ITTLRGHVQ  503 (573)
Q Consensus       439 ------g~i~lwd~~~~~~~~~~~~~h~--~~v~~v~~sp~g~~las~s~-dg----~i~lwd~~~~~~--~~~~~~h~~  503 (573)
                            ..|.++|.....  ...+..+.  ..+..++|+|||+.|+..+. ++    .|.+||+.+++.  +..+.++..
T Consensus       210 ~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~  287 (388)
T 3pe7_A          210 PHDLVDARMWLINEDGTN--MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSH  287 (388)
T ss_dssp             CTTTSSCSEEEEETTSCC--CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEE
T ss_pred             CCCCCcceEEEEeCCCCc--eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCcee
Confidence                  367777765432  23333333  35778999999997765443 22    399999998864  334444211


Q ss_pred             eEE---EEEECCCCCEEEEE---------eCCCcEEEEeCCcccccccccCcCC-----------CEEEEEEccCCCEEE
Q psy2671         504 AVY---MVAWSSDSRLLVSG---------SADSTLKVWNMKTKKIEQDLPGHGD-----------EVYAVDWAPDGEKVA  560 (573)
Q Consensus       504 ~v~---~v~~s~dg~~las~---------s~D~~v~vwd~~~~~~~~~l~~h~~-----------~v~~~~~s~d~~~l~  560 (573)
                      ...   .++|+|||+.|+..         ..+..|++||+.+++. ..+..|..           .+.+++|+|||++|+
T Consensus       288 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~  366 (388)
T 3pe7_A          288 LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQIL  366 (388)
T ss_dssp             EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEE
T ss_pred             eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEE
Confidence            111   13799999988754         4566899999988765 33444544           577889999999888


Q ss_pred             Eee-CCCcEEEcc
Q psy2671         561 SGG-KDKVLRLWQ  572 (573)
Q Consensus       561 s~~-~d~~i~iw~  572 (573)
                      .++ .++...||.
T Consensus       367 ~~s~~~g~~~l~~  379 (388)
T 3pe7_A          367 FTSDVHGKPALYL  379 (388)
T ss_dssp             EEECTTSSCEEEE
T ss_pred             EEecCCCceeEEE
Confidence            665 567777774

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.85  E-value=3.9e-19  Score=174.38  Aligned_cols=284  Identities=11%  Similarity=0.065  Sum_probs=177.2

Q ss_pred             EEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671         115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR  194 (573)
Q Consensus       115 ~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (573)
                      +++++++++++++++.|++|++||..+++.+....                                             
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~---------------------------------------------   38 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV---------------------------------------------   38 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE---------------------------------------------
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEe---------------------------------------------
Confidence            45678899999999999999999998875432111                                             


Q ss_pred             eccccccCCCCCCCcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCC------CcEEEEEEcCCCCeEEEE
Q psy2671         195 PVTRCTSSMPGHAEAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHK------HWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       195 ~~~~~~~~~~gh~~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~------~~V~~v~~s~dg~~l~sg  267 (573)
                              . +....+..++|+|+|++++ ++..++.|.+||+.+++.+..+..+.      ..+.+++|+|||++|+++
T Consensus        39 --------~-~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~  109 (349)
T 1jmx_B           39 --------M-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT  109 (349)
T ss_dssp             --------C-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred             --------c-CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEE
Confidence                    0 1111356789999998665 55578999999999988776655322      236789999999999998


Q ss_pred             eeC------------CeEEEEECCCCceeccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         268 CKN------------GVIHAWDSSTGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       268 s~d------------g~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      +.+            +.|.+||+.+++..... ...+...+.+++|.|     +++ +..++.  .|++||..+++....
T Consensus       110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~-----dg~-l~~~~~--~i~~~d~~~~~~~~~  181 (349)
T 1jmx_B          110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD-----DGS-LYVAGP--DIYKMDVKTGKYTVA  181 (349)
T ss_dssp             EEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT-----TSC-EEEESS--SEEEECTTTCCEEEE
T ss_pred             cccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC-----CCc-EEEccC--cEEEEeCCCCceecc
Confidence            876            89999999875432111 111223466666655     566 444443  499999998887766


Q ss_pred             ecCCCc------------------------cEEEEEECCCcEE--EEEeCCCeEEEEeCCCCeeeE-eccCCcceeeEEE
Q psy2671         335 LTSHTR------------------------SVTCIRWGGSGLI--YSASQDRTIKVWRASDGVMCR-TLEGHAHWVNTLA  387 (573)
Q Consensus       335 ~~~h~~------------------------~v~~~~~~~~~~l--~s~s~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~  387 (573)
                      +..+..                        ...++++.+++..  ........+..++..++.... .+..+......+ 
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  260 (349)
T 1jmx_B          182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG-  260 (349)
T ss_dssp             ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEE-
T ss_pred             ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceee-
Confidence            653320                        1223333322100  000000011112222221100 000011111112 


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEE
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV  466 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v  466 (573)
                                                          ..+| ++.+++++  ++.|.+||+.+.+. ...+.. ...+.++
T Consensus       261 ------------------------------------~~sp~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~~-~~~~~~~  300 (349)
T 1jmx_B          261 ------------------------------------LRSPKDPNQIYGV--LNRLAKYDLKQRKL-IKAANL-DHTYYCV  300 (349)
T ss_dssp             ------------------------------------EECSSCTTEEEEE--ESEEEEEETTTTEE-EEEEEC-SSCCCEE
T ss_pred             ------------------------------------EecCCCCCEEEEE--cCeEEEEECccCeE-EEEEcC-CCCccce
Confidence                                                2346 78888877  88999999987543 223322 2346789


Q ss_pred             EECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       467 ~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      +|+|+|++|++++.++.|++||..+++.+..++.+
T Consensus       301 ~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          301 AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             EECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            99999998888888999999999999887776543

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.84  E-value=1.4e-18  Score=170.88  Aligned_cols=296  Identities=11%  Similarity=0.092  Sum_probs=199.0

Q ss_pred             CCCeEEEEe------CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEECCCC
Q psy2671         218 NGRSLASGS------GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDSSTG  281 (573)
Q Consensus       218 ~g~~las~s------~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~~~~  281 (573)
                      +++++....      .|++|.+||..+++.+..+..+..+  .++|+|||++|+++.          .++.|.+||..++
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~   91 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL   91 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence            455555543      3789999999999888777766554  899999999999886          3678999999887


Q ss_pred             ceecccccC-----CcccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCc--
Q psy2671         282 KQIGQPMRG-----HKQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSG--  351 (573)
Q Consensus       282 ~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~--  351 (573)
                      +.+.....+     +......+.+     +++++++.++..  +++|.+||+.+++.+.. +....  ...+.+.+.+  
T Consensus        92 ~~~~~i~~~~~~~~~g~~p~~i~~-----spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~  164 (361)
T 2oiz_A           92 TFEKEISLPPKRVQGLNYDGLFRQ-----TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPR  164 (361)
T ss_dssp             CEEEEEEECTTBCCBCCCGGGEEE-----CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSS
T ss_pred             cEEEEEEcCccccccCCCcceEEE-----CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCe
Confidence            665332111     1112223343     457888877753  68999999999988777 54322  1223344433  


Q ss_pred             EEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         352 LIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                      .+++.+.||.+.+|+... +.......  ..                      ..+.....        ..+....+++.
T Consensus       165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~--~~----------------------~~~~~~~~--------~~~~~~~~~g~  212 (361)
T 2oiz_A          165 SFMTICGDGGLLTINLGEDGKVASQSR--SK----------------------QMFSVKDD--------PIFIAPALDKD  212 (361)
T ss_dssp             EEEEEETTSSEEEEEECTTSSEEEEEE--CC----------------------CCSCTTTS--------CBCSCCEECSS
T ss_pred             eEEEECCCCcEEEEEECCCCcEeeecc--cc----------------------ceEcCCCC--------ceEEEecccCC
Confidence            678889999999998754 43221100  00                      00000000        00011124456


Q ss_pred             EEEEEeCCCeEEEEcCCCCccce-eeec--c----cc----ccEEEEEECCCCCEEEEeeC-----------CCcEEEEe
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSL-ARMT--G----HQ----QLINCVEFSPDGRIIASASF-----------DKSIKLWD  488 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~-~~~~--~----h~----~~v~~v~~sp~g~~las~s~-----------dg~i~lwd  488 (573)
                      .++..+.++.+.++|+....... ..+.  .    +.    .....++|+|+++.+.++..           .+.|.+||
T Consensus       213 ~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD  292 (361)
T 2oiz_A          213 KAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMD  292 (361)
T ss_dssp             EEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEE
T ss_pred             EEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEE
Confidence            66777788999999986543211 1110  0    00    01112789999887776543           34799999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc--cccccccCcCCCEEEEEEccCCC
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK--KIEQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~--~~~~~l~~h~~~v~~~~~s~d~~  557 (573)
                      ..+++.+.++..+.  ...++|+|||++|++++. ++|.+||..++  +.+..+..+...-..+.++|||+
T Consensus       293 ~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          293 TKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             TTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             CCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence            99999999998876  889999999999998887 99999999999  88888766777888999999986

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.84  E-value=2e-18  Score=169.44  Aligned_cols=267  Identities=10%  Similarity=0.053  Sum_probs=171.0

Q ss_pred             CCCeEEEEECC--CCeeeE-EecCCCCcEEEEEEcCCCCeEEEEee---CCeEEEEECCCCcee-cccccCCcccEEEEE
Q psy2671         227 GDTTVRFWDVT--TQTPLF-KCEGHKHWVLCIAWSPDSKQLVSGCK---NGVIHAWDSSTGKQI-GQPMRGHKQWITALS  299 (573)
Q Consensus       227 ~d~~i~iwd~~--~~~~~~-~~~~h~~~V~~v~~s~dg~~l~sgs~---dg~i~vwd~~~~~~~-~~~~~~h~~~v~~~~  299 (573)
                      .++.|.+|++.  +++... ....+......++|+|||+ |++++.   ++.|.+|++.++... ......+...+..++
T Consensus        14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a   92 (347)
T 3hfq_A           14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA   92 (347)
T ss_dssp             SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence            35567777654  454322 2233445677899999999 666655   589999999766531 112223445566677


Q ss_pred             ecccccCCCCCEEEEEe-CCCcEEEEECCC-C--eEEEEecC---------CCccEEEEEECCCcEEE-EEeCCCeEEEE
Q psy2671         300 WEPFHLNHQCRRFASSG-KDGAIRIWDVIL-S--QCVRVLTS---------HTRSVTCIRWGGSGLIY-SASQDRTIKVW  365 (573)
Q Consensus       300 ~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~-~--~~~~~~~~---------h~~~v~~~~~~~~~~l~-s~s~d~~i~vw  365 (573)
                      |.|     +++++++++ .++.+++|++.. +  ..+..+..         +...+.+++|++++.++ +...++.|.+|
T Consensus        93 ~sp-----dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~  167 (347)
T 3hfq_A           93 VDE-----ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY  167 (347)
T ss_dssp             EET-----TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             ECC-----CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence            665     677777777 789999999853 2  22222221         12348889999887544 44568899999


Q ss_pred             eCC-CCeeeEe--ccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE-EeCCCe
Q psy2671         366 RAS-DGVMCRT--LEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS-GSDDFT  440 (573)
Q Consensus       366 ~~~-~~~~~~~--~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-g~~dg~  440 (573)
                      ++. ++.....  +..+ ......                                     ..++|+|+++++ ...++.
T Consensus       168 ~~~~~g~~~~~~~~~~~~g~~p~~-------------------------------------~~~spdg~~l~v~~~~~~~  210 (347)
T 3hfq_A          168 NVSDAGQLSEQSVLTMEAGFGPRH-------------------------------------LVFSPDGQYAFLAGELSSQ  210 (347)
T ss_dssp             EECTTSCEEEEEEEECCTTCCEEE-------------------------------------EEECTTSSEEEEEETTTTE
T ss_pred             EECCCCcEEEeeeEEcCCCCCCce-------------------------------------EEECCCCCEEEEEeCCCCE
Confidence            987 4433211  1110 001111                                     234577885554 567889


Q ss_pred             EEEEcCCC--Ccc-ceeeecccc------ccEEEEEECCCCCEE-EEeeCCCcEEEEeCCC---CeEEEeecCCcceEEE
Q psy2671         441 LFLWNPEK--EKK-SLARMTGHQ------QLINCVEFSPDGRII-ASASFDKSIKLWDGRI---GKFITTLRGHVQAVYM  507 (573)
Q Consensus       441 i~lwd~~~--~~~-~~~~~~~h~------~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~---~~~~~~~~~h~~~v~~  507 (573)
                      +++|++..  +.. ....+....      ..+..++|+|||++| ++...++.|.+||+..   .+.+..+..+...+..
T Consensus       211 v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~  290 (347)
T 3hfq_A          211 IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRD  290 (347)
T ss_dssp             EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCE
T ss_pred             EEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCe
Confidence            99998764  221 112222211      347889999999977 4556789999999862   2455666666666789


Q ss_pred             EEECCCCCEEEEEeCC-CcEEEEeC--Ccccc
Q psy2671         508 VAWSSDSRLLVSGSAD-STLKVWNM--KTKKI  536 (573)
Q Consensus       508 v~~s~dg~~las~s~D-~~v~vwd~--~~~~~  536 (573)
                      ++|+|||++|++++.+ +.|.+|++  .++++
T Consensus       291 ~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l  322 (347)
T 3hfq_A          291 FDLDPTEAFVVVVNQNTDNATLYARDLTSGKL  322 (347)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred             EEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence            9999999998888764 89999954  55554

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.84  E-value=1.6e-18  Score=170.14  Aligned_cols=269  Identities=17%  Similarity=0.217  Sum_probs=168.1

Q ss_pred             CCeEEEEEC--CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCCCe--EEEEecCCCccE
Q psy2671         270 NGVIHAWDS--STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVILSQ--CVRVLTSHTRSV  342 (573)
Q Consensus       270 dg~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~--~~~~~~~h~~~v  342 (573)
                      ++.|.+|++  .+++........+......++|.|     +++ +++++.   ++.|++|++..+.  .+..+..+...+
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~sp-----dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p   88 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSA-----KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP   88 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECT-----TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEcc-----CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC
Confidence            455666654  445432212223334455566655     566 444443   6899999997665  333444566778


Q ss_pred             EEEEECCCc-EEEEEe-CCCeEEEEeCCC-Ceee--EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         343 TCIRWGGSG-LIYSAS-QDRTIKVWRASD-GVMC--RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s-~d~~i~vw~~~~-~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      ..++|++++ .+++++ .++++.+|++.. +...  ..+.....                         .+.   .....
T Consensus        89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-------------------------~p~---~~~~~  140 (347)
T 3hfq_A           89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH-------------------------GPR---PEQDG  140 (347)
T ss_dssp             SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC-------------------------CSS---TTCSS
T ss_pred             EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC-------------------------CCC---ccccC
Confidence            899999887 577777 789999999853 3211  11110000                         000   00000


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc--eeeecc-ccccEEEEEECCCCCEEEE-eeCCCcEEEEeCCC--
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS--LARMTG-HQQLINCVEFSPDGRIIAS-ASFDKSIKLWDGRI--  491 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~--~~~~~~-h~~~v~~v~~sp~g~~las-~s~dg~i~lwd~~~--  491 (573)
                      ........+|+|+.+++...++.+++|++......  ...... .......++|+|||+++++ +..++.|.+|+...  
T Consensus       141 ~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~  220 (347)
T 3hfq_A          141 SHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT  220 (347)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred             CCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence            00112234577887777777899999998732221  111121 2235788999999996655 56788999998763  


Q ss_pred             CeE--EEeecCCc------ceEEEEEECCCCCEE-EEEeCCCcEEEEeCCcc---cccccccCcCCCEEEEEEccCCCEE
Q psy2671         492 GKF--ITTLRGHV------QAVYMVAWSSDSRLL-VSGSADSTLKVWNMKTK---KIEQDLPGHGDEVYAVDWAPDGEKV  559 (573)
Q Consensus       492 ~~~--~~~~~~h~------~~v~~v~~s~dg~~l-as~s~D~~v~vwd~~~~---~~~~~l~~h~~~v~~~~~s~d~~~l  559 (573)
                      ++.  +..+....      ..+..++|+|||++| ++...++.|.+|++...   +.+..+..+...+..++|+|||++|
T Consensus       221 g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l  300 (347)
T 3hfq_A          221 GAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFV  300 (347)
T ss_dssp             TEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred             CceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence            543  22332221      458899999999987 45567899999999732   3455566666678899999999999


Q ss_pred             EEeeCC-CcEEEcc
Q psy2671         560 ASGGKD-KVLRLWQ  572 (573)
Q Consensus       560 ~s~~~d-~~i~iw~  572 (573)
                      ++++.+ +.|.+|+
T Consensus       301 ~v~~~~~~~v~v~~  314 (347)
T 3hfq_A          301 VVVNQNTDNATLYA  314 (347)
T ss_dssp             EEEETTTTEEEEEE
T ss_pred             EEEEcCCCcEEEEE
Confidence            888765 8899993

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.82  E-value=1.3e-17  Score=164.60  Aligned_cols=282  Identities=11%  Similarity=0.086  Sum_probs=173.2

Q ss_pred             CCCeEEEEe----eCCeEEEEEC--CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCC-
Q psy2671         260 DSKQLVSGC----KNGVIHAWDS--STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVIL-  328 (573)
Q Consensus       260 dg~~l~sgs----~dg~i~vwd~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~-  328 (573)
                      ...+++.|+    .++.|.+|++  .+++....... +......++|+|     +++++++++.+    +.|++|++.. 
T Consensus        12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~sp-----dg~~l~~~~~~~~~~~~v~~~~~~~~   85 (361)
T 3scy_A           12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSA-----DGKFVYSVNEFSKDQAAVSAFAFDKE   85 (361)
T ss_dssp             GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECT-----TSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred             CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECC-----CCCEEEEEEccCCCCCcEEEEEEeCC
Confidence            334556664    3567888865  44543221111 444455566554     67888888775    7999998765 


Q ss_pred             -CeE--EEEecCCCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         329 -SQC--VRVLTSHTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       329 -~~~--~~~~~~h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                       ++.  +.....+......+++ +...+++++ .++++.+|++.....+......      +....          .+  
T Consensus        86 ~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~------~~~~g----------~~--  146 (361)
T 3scy_A           86 KGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDV------IEFKG----------SG--  146 (361)
T ss_dssp             TTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE------EECCC----------CC--
T ss_pred             CCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCccccee------EEccC----------CC--
Confidence             432  3334445556777788 444566555 6899999998754322111000      00000          00  


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCcc------c------eeeeccccccEEEEEECCC
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKK------S------LARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~------~------~~~~~~h~~~v~~v~~sp~  471 (573)
                       ..+..    ...........+|+|++++++. .++.+++|++.....      .      ......+......++|+||
T Consensus       147 -~~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spd  221 (361)
T 3scy_A          147 -PDKER----QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSD  221 (361)
T ss_dssp             -SCTTT----CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTT
T ss_pred             -CCccc----cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCC
Confidence             00000    0000011234568888665544 588999998764332      1      1112233455789999999


Q ss_pred             CCEEEEee-CCCcEEEEeCCCCeE--EEe---ecCCcceEEEEEECCCCCEEEEEeC--CCcEEEEeCC--ccc--cccc
Q psy2671         472 GRIIASAS-FDKSIKLWDGRIGKF--ITT---LRGHVQAVYMVAWSSDSRLLVSGSA--DSTLKVWNMK--TKK--IEQD  539 (573)
Q Consensus       472 g~~las~s-~dg~i~lwd~~~~~~--~~~---~~~h~~~v~~v~~s~dg~~las~s~--D~~v~vwd~~--~~~--~~~~  539 (573)
                      |+++++++ .++.|.+||..+++.  +..   ...+......++|+|||++|+++..  ++.|.+|++.  +++  .+..
T Consensus       222 g~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~  301 (361)
T 3scy_A          222 GKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGY  301 (361)
T ss_dssp             SSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEE
T ss_pred             CCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeE
Confidence            99887776 689999999887754  222   2334455789999999999877665  4899999995  344  3334


Q ss_pred             ccCcCCCEEEEEEccCCCEEEEee-CCCcEEEcc
Q psy2671         540 LPGHGDEVYAVDWAPDGEKVASGG-KDKVLRLWQ  572 (573)
Q Consensus       540 l~~h~~~v~~~~~s~d~~~l~s~~-~d~~i~iw~  572 (573)
                      +.. ...+.+++|+|||++|++++ .++.|.+|+
T Consensus       302 ~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~  334 (361)
T 3scy_A          302 QLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFE  334 (361)
T ss_dssp             EEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred             ecC-CCCCceEEECCCCCEEEEEECCCCCEEEEE
Confidence            443 45678999999999998887 568899974

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.82  E-value=1.4e-18  Score=188.15  Aligned_cols=299  Identities=11%  Similarity=0.080  Sum_probs=195.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-----EEEEEEcCCCCeEEEEeeC---------CeEE
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-----VLCIAWSPDSKQLVSGCKN---------GVIH  274 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-----V~~v~~s~dg~~l~sgs~d---------g~i~  274 (573)
                      ...+++|+|||++++++  |++|++||+.+++....+.+|...     ...++|||||++|+.++.+         +.+.
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~   95 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD   95 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence            35588999999988886  999999999999877777777543     2347899999999998886         5667


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccE-----------
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSV-----------  342 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v-----------  342 (573)
                      +||+.+++..  .+..|...+....|+|     +|+.++.+ .++.|++|++..++..+. ..++...+           
T Consensus        96 ~~d~~~~~~~--~l~~~~~~~~~~~~SP-----dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e  167 (740)
T 4a5s_A           96 IYDLNKRQLI--TEERIPNNTQWVTWSP-----VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE  167 (740)
T ss_dssp             EEETTTTEEC--CSSCCCTTEEEEEECS-----STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred             EEECCCCcEE--EcccCCCcceeeEECC-----CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence            9999998753  4566777889999877     67888877 478999999988775543 22333222           


Q ss_pred             ------EEEEECCCc-EEEEEeCC-CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671         343 ------TCIRWGGSG-LIYSASQD-RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES  414 (573)
Q Consensus       343 ------~~~~~~~~~-~l~s~s~d-~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  414 (573)
                            ..+.|+++| .|+.++.| +.+++|++......   .++...+..+.+..                        
T Consensus       168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~---~~~~~~~~~~~yp~------------------------  220 (740)
T 4a5s_A          168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE---SLQYPKTVRVPYPK------------------------  220 (740)
T ss_dssp             HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST---TCSSCEEEEEECCB------------------------
T ss_pred             hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC---CCCCCcceeecCCC------------------------
Confidence                  348899998 46666544 44777764311000   01111111111111                        


Q ss_pred             hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC---Ccc-ceeeec------cccccEEEEEECCCCCEEEEee----C
Q psy2671         415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK---EKK-SLARMT------GHQQLINCVEFSPDGRIIASAS----F  480 (573)
Q Consensus       415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~---~~~-~~~~~~------~h~~~v~~v~~sp~g~~las~s----~  480 (573)
                                   .|..    ....++++||+.+   +.. ....+.      +|...+..++|||||++++...    .
T Consensus       221 -------------~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~  283 (740)
T 4a5s_A          221 -------------AGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN  283 (740)
T ss_dssp             -------------TTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT
T ss_pred             -------------CcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC
Confidence                         1110    1123688999887   521 122232      3777899999999999776553    2


Q ss_pred             CCcEEEEeCCCCe----EEE--ee--cCCcceEE-----EEEECCCCCEEE-EEe-CCC--cEEEEeCCcccccccccCc
Q psy2671         481 DKSIKLWDGRIGK----FIT--TL--RGHVQAVY-----MVAWSSDSRLLV-SGS-ADS--TLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       481 dg~i~lwd~~~~~----~~~--~~--~~h~~~v~-----~v~~s~dg~~la-s~s-~D~--~v~vwd~~~~~~~~~l~~h  543 (573)
                      +..|++||+.+++    +..  .+  .+|...+.     ..+|||||+.|+ ..+ .+|  .|++||+.+++..+ +...
T Consensus       284 ~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g  362 (740)
T 4a5s_A          284 YSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKG  362 (740)
T ss_dssp             EEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCS
T ss_pred             EEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccC
Confidence            3479999998886    221  22  34554444     678999999877 665 343  58888988766544 3333


Q ss_pred             CCCEEEEEEccCCCEEEEee
Q psy2671         544 GDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       544 ~~~v~~~~~s~d~~~l~s~~  563 (573)
                      .-.|..+. ++|++.|+..+
T Consensus       363 ~~~v~~~~-~~d~~~i~f~~  381 (740)
T 4a5s_A          363 TWEVIGIE-ALTSDYLYYIS  381 (740)
T ss_dssp             SSCEEEEE-EECSSEEEEEE
T ss_pred             CEEEEEEE-EEeCCEEEEEE
Confidence            45566653 34566655433

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.81  E-value=6.2e-18  Score=168.56  Aligned_cols=285  Identities=15%  Similarity=0.151  Sum_probs=184.3

Q ss_pred             CCCCCCcEEE-----EEEcCCCCeEEEEeC-CC--eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEE
Q psy2671         203 MPGHAEAVIS-----VKFSPNGRSLASGSG-DT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH  274 (573)
Q Consensus       203 ~~gh~~~V~~-----~~fsp~g~~las~s~-d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~  274 (573)
                      +..|......     .+|||||++|+.++. ++  .|.+||+.+++......++...+.+++|+|||++|+.++.++.|+
T Consensus        26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~  105 (388)
T 3pe7_A           26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM  105 (388)
T ss_dssp             CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE
T ss_pred             ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE
Confidence            4455555555     789999999999887 66  488889999887766667766666778999999999999999999


Q ss_pred             EEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE----------------------eCCCcEEEEECCCCeEE
Q psy2671         275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS----------------------GKDGAIRIWDVILSQCV  332 (573)
Q Consensus       275 vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~----------------------~~dg~v~iwd~~~~~~~  332 (573)
                      +||+.+++... ....+...+....|.   .+++++.++..                      +.+..|.+||+.+++..
T Consensus       106 ~~d~~~g~~~~-~~~~~~~~~~~~~~~---~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~  181 (388)
T 3pe7_A          106 RVDLATLEENV-VYQVPAEWVGYGTWV---ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST  181 (388)
T ss_dssp             EEETTTCCEEE-EEECCTTEEEEEEEE---ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE
T ss_pred             EEECCCCccee-eeechhhccccccee---ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE
Confidence            99999886532 223344444434332   13456666532                      24467999999888654


Q ss_pred             EEecCCCccEEEEEECC-Cc-EEEEEeCC------CeEEEEeCCCCeeeEeccCCc--ceeeEEEeccCceeEEEEcCCC
Q psy2671         333 RVLTSHTRSVTCIRWGG-SG-LIYSASQD------RTIKVWRASDGVMCRTLEGHA--HWVNTLALSTDYLMRVEATSTG  402 (573)
Q Consensus       333 ~~~~~h~~~v~~~~~~~-~~-~l~s~s~d------~~i~vw~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~~~~~~  402 (573)
                       .+..+...+..+.|++ ++ .|+..+.+      ..|.+++...+.. ..+..+.  ..+..+++              
T Consensus       182 -~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~--------------  245 (388)
T 3pe7_A          182 -VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFW--------------  245 (388)
T ss_dssp             -EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEE--------------
T ss_pred             -EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceE--------------
Confidence             3445566789999999 77 45555443      3677777655433 2232222  23333333              


Q ss_pred             ceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC--C---CeEEEEcCCCCcc-ceeeecccccc---EEEEEECCCCC
Q psy2671         403 GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD--D---FTLFLWNPEKEKK-SLARMTGHQQL---INCVEFSPDGR  473 (573)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~--d---g~i~lwd~~~~~~-~~~~~~~h~~~---v~~v~~sp~g~  473 (573)
                                             +|+|+.|+..+.  +   ..|++||+.++.. .+....++...   ...++|+|||+
T Consensus       246 -----------------------spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~  302 (388)
T 3pe7_A          246 -----------------------VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS  302 (388)
T ss_dssp             -----------------------CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred             -----------------------CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence                                   366776654332  1   2499999987653 22223221110   11237999999


Q ss_pred             EEEEe---------eCCCcEEEEeCCCCeEEEeecCCcc-----------eEEEEEECCCCCEEEEEe-CCCcEEEEeC
Q psy2671         474 IIASA---------SFDKSIKLWDGRIGKFITTLRGHVQ-----------AVYMVAWSSDSRLLVSGS-ADSTLKVWNM  531 (573)
Q Consensus       474 ~las~---------s~dg~i~lwd~~~~~~~~~~~~h~~-----------~v~~v~~s~dg~~las~s-~D~~v~vwd~  531 (573)
                      .|+..         ..+..|.+||..+++. ..+..|..           .+..++|||||+.|+.++ .++...||.+
T Consensus       303 ~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~  380 (388)
T 3pe7_A          303 DAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA  380 (388)
T ss_dssp             CC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             cceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence            88854         4566899999998765 34444443           467889999999888665 5677777754

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.80  E-value=6.6e-18  Score=180.92  Aligned_cols=302  Identities=11%  Similarity=0.035  Sum_probs=191.0

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEe--eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~--s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      .+.+|...|.+++|++++-++++.  +.++..+||....+....+                                   
T Consensus        18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----------------------------------   62 (662)
T 3azo_A           18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES-----------------------------------   62 (662)
T ss_dssp             HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE-----------------------------------
T ss_pred             HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce-----------------------------------
Confidence            355799999999999988788887  6688999998633221111                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEE---------EEEEc--CCCCe-EEEEeC-CCeEEEEECC--C-CeeeEEec
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVI---------SVKFS--PNGRS-LASGSG-DTTVRFWDVT--T-QTPLFKCE  246 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~---------~~~fs--p~g~~-las~s~-d~~i~iwd~~--~-~~~~~~~~  246 (573)
                                          +.+|...+.         ...|+  |||+. |+.++. +..|.+|++.  + +. ...+.
T Consensus        63 --------------------l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~  121 (662)
T 3azo_A           63 --------------------ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLT  121 (662)
T ss_dssp             --------------------SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECS
T ss_pred             --------------------eCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEecc
Confidence                                111222222         34454  99998 776654 5667777765  2 33 34455


Q ss_pred             C-----CCCcEEEEEEcCCCCeEEEEeeC----------CeEEEEECCC------Cceeccccc-CCcccEEEEEecccc
Q psy2671         247 G-----HKHWVLCIAWSPDSKQLVSGCKN----------GVIHAWDSST------GKQIGQPMR-GHKQWITALSWEPFH  304 (573)
Q Consensus       247 ~-----h~~~V~~v~~s~dg~~l~sgs~d----------g~i~vwd~~~------~~~~~~~~~-~h~~~v~~~~~~~~~  304 (573)
                      .     |...+.+++|||||++|++++.+          ..|++||+.+      +..  ..+. .+...+..+.|+|  
T Consensus       122 ~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~Sp--  197 (662)
T 3azo_A          122 PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV--RELSDDAHRFVTGPRLSP--  197 (662)
T ss_dssp             CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS--EESSCSCSSEECCCEECT--
T ss_pred             CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce--eEEEecCCCcccCceECC--
Confidence            4     66788999999999999998877          5899999987      443  2333 4445666666655  


Q ss_pred             cCCCCCEEEEEeCC--------CcEEEEECC-CC---eEEEEecCCCccEEEEEECCCc-EEEEEeCCC--eEEEEeCCC
Q psy2671         305 LNHQCRRFASSGKD--------GAIRIWDVI-LS---QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR--TIKVWRASD  369 (573)
Q Consensus       305 ~~~~~~~l~s~~~d--------g~v~iwd~~-~~---~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~--~i~vw~~~~  369 (573)
                         ++++|+.++.+        ..|++||+. ++   +......+|...+..+.|++++ .+++++.++  .|.+|+..+
T Consensus       198 ---DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~  274 (662)
T 3azo_A          198 ---DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT  274 (662)
T ss_dssp             ---TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT
T ss_pred             ---CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC
Confidence               78888877755        379999998 56   4444555567889999999887 566777788  555556555


Q ss_pred             CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE--cCC
Q psy2671         370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW--NPE  447 (573)
Q Consensus       370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw--d~~  447 (573)
                      +.......++.. +....++++                            .......+++.+++++.. +.+++|  |+.
T Consensus       275 ~~~~~l~~~~~~-~~~p~w~~~----------------------------~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~  324 (662)
T 3azo_A          275 GAATQLCRREEE-FAGPLWTPG----------------------------MRWFAPLANGLIAVVHGK-GAAVLGILDPE  324 (662)
T ss_dssp             CCEEESSCCSSB-SSCCCCSTT----------------------------CCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred             Cceeeccccccc-ccCcccccc----------------------------CceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence            554333222211 100000000                            001123467888999988 999999  544


Q ss_pred             CCccceeeeccccccEEEE-EECCCCCEEEEeeCCCc--EEEEeCCCCeEEEeecCC
Q psy2671         448 KEKKSLARMTGHQQLINCV-EFSPDGRIIASASFDKS--IKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       448 ~~~~~~~~~~~h~~~v~~v-~~sp~g~~las~s~dg~--i~lwd~~~~~~~~~~~~h  501 (573)
                      .+  ....+..|...+..+ +++++.-++++++.+..  |.+||..+++.......+
T Consensus       325 ~~--~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~  379 (662)
T 3azo_A          325 SG--ELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARH  379 (662)
T ss_dssp             TT--EEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCC
T ss_pred             CC--cEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCC
Confidence            33  256667777777777 55544444555566654  555577777654333334

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.79  E-value=2e-17  Score=163.31  Aligned_cols=259  Identities=10%  Similarity=0.072  Sum_probs=154.2

Q ss_pred             CeEEEEEC--CCCeee--EEec-CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC-CCceeccc-ccCCcccEEEEEec
Q psy2671         229 TTVRFWDV--TTQTPL--FKCE-GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS-TGKQIGQP-MRGHKQWITALSWE  301 (573)
Q Consensus       229 ~~i~iwd~--~~~~~~--~~~~-~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~-~~~~~~~~-~~~h~~~v~~~~~~  301 (573)
                      +.|.+|++  .+++..  .... +....+..++|+|||++|++++.+ .|.+|++. +++..... ...+ .....++  
T Consensus        14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~--   89 (365)
T 1jof_A           14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRAND--   89 (365)
T ss_dssp             CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGC--
T ss_pred             CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEE--
Confidence            45666654  444432  1111 233457789999999999999888 99999986 66542110 0000 1111122  


Q ss_pred             ccccCCCCCE--EEEEe-------------CCCcEEEEECCC-CeEEEEec----CCCccEEEEEECCCc-EEEEEe-CC
Q psy2671         302 PFHLNHQCRR--FASSG-------------KDGAIRIWDVIL-SQCVRVLT----SHTRSVTCIRWGGSG-LIYSAS-QD  359 (573)
Q Consensus       302 ~~~~~~~~~~--l~s~~-------------~dg~v~iwd~~~-~~~~~~~~----~h~~~v~~~~~~~~~-~l~s~s-~d  359 (573)
                         +++++++  +++++             .+|++++|++.. ++....+.    .+...+.+++|++++ .++++. .+
T Consensus        90 ---~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~  166 (365)
T 1jof_A           90 ---ADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTA  166 (365)
T ss_dssp             ---TTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred             ---ECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCC
Confidence               3456664  33442             577788887752 33332222    133445555665555 244333 23


Q ss_pred             CeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         360 RTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       360 ~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      +.|.+|++. ++...                                                                 
T Consensus       167 ~~v~~~~~~~~g~~~-----------------------------------------------------------------  181 (365)
T 1jof_A          167 NKLWTHRKLASGEVE-----------------------------------------------------------------  181 (365)
T ss_dssp             TEEEEEEECTTSCEE-----------------------------------------------------------------
T ss_pred             CEEEEEEECCCCCEE-----------------------------------------------------------------
Confidence            455555543 22110                                                                 


Q ss_pred             CeEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeC-CCcEEEEeCC--CCeEE------Eeec----CCcc
Q psy2671         439 FTLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASF-DKSIKLWDGR--IGKFI------TTLR----GHVQ  503 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~-dg~i~lwd~~--~~~~~------~~~~----~h~~  503 (573)
                                   ....+.  .|...+..++|+|||+++++++. ++.|.+|+..  +++..      ..+.    +|..
T Consensus       182 -------------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~  248 (365)
T 1jof_A          182 -------------LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP  248 (365)
T ss_dssp             -------------EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred             -------------EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence                         011111  12345788999999999888764 7899998754  56542      2232    2222


Q ss_pred             ------eEEEEE-ECCCCCEEEEEeCC-C-----cEEEEeCC-cccccc---cccCcCCCEEEEEEcc---CCCEEEEee
Q psy2671         504 ------AVYMVA-WSSDSRLLVSGSAD-S-----TLKVWNMK-TKKIEQ---DLPGHGDEVYAVDWAP---DGEKVASGG  563 (573)
Q Consensus       504 ------~v~~v~-~s~dg~~las~s~D-~-----~v~vwd~~-~~~~~~---~l~~h~~~v~~~~~s~---d~~~l~s~~  563 (573)
                            .+..++ |+|||++|++++.+ +     +|.+|++. +++...   ....+...+..++|+|   ||++|++++
T Consensus       249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~  328 (365)
T 1jof_A          249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD  328 (365)
T ss_dssp             TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC
T ss_pred             ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE
Confidence                  588999 99999998877643 2     89999996 555432   2333444566789999   899999988


Q ss_pred             CC-CcEEEcc
Q psy2671         564 KD-KVLRLWQ  572 (573)
Q Consensus       564 ~d-~~i~iw~  572 (573)
                      .+ +.|++|+
T Consensus       329 ~~~~~v~v~~  338 (365)
T 1jof_A          329 DQEGWLEIYR  338 (365)
T ss_dssp             SSSCEEEEEE
T ss_pred             cCCCeEEEEE
Confidence            75 8999996

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.79  E-value=7.6e-17  Score=158.48  Aligned_cols=266  Identities=12%  Similarity=0.086  Sum_probs=168.6

Q ss_pred             EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC------CCcEEEEEEcCCCCeEEEEee--CCeE
Q psy2671         212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH------KHWVLCIAWSPDSKQLVSGCK--NGVI  273 (573)
Q Consensus       212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h------~~~V~~v~~s~dg~~l~sgs~--dg~i  273 (573)
                      .++|+|||++++++.          .+++|.+||..+.+.+..+...      ......++|+|||++|+++..  ++.|
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v  133 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI  133 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence            789999999998886          3678999999988877665422      234567899999999998875  5799


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEE------ecCCCccEEEEE
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRV------LTSHTRSVTCIR  346 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~------~~~h~~~v~~~~  346 (573)
                      .+||+.+++.+...+... . ...+.+.|.    ....+++.+.||.+.+|+... ++....      +..+..++ .+.
T Consensus       134 ~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~----~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~  206 (361)
T 2oiz_A          134 GIVDVAKGDYVEDVTAAA-G-CWSVIPQPN----RPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIA  206 (361)
T ss_dssp             EEEETTTTEEEEEEGGGT-T-EEEEEECTT----SSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSC
T ss_pred             EEEECCCCcEEEEEecCC-C-cceeEEcCC----CCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEE
Confidence            999999887653302111 1 111222331    225788889999999998754 433311      11111111 111


Q ss_pred             ECCC-cEEEEEeCCCeEEEEeCCCCeee--EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         347 WGGS-GLIYSASQDRTIKVWRASDGVMC--RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       347 ~~~~-~~l~s~s~d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      ..++ ..++..+.++.+.++|+..+...  ..+.-......    .              ..+.+         .-....
T Consensus       207 ~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~----~--------------~~~~p---------~g~~~~  259 (361)
T 2oiz_A          207 PALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK----A--------------KNWVP---------GGYNLV  259 (361)
T ss_dssp             CEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH----H--------------TTCEE---------CCSSCE
T ss_pred             ecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc----c--------------ccccc---------CCeeEE
Confidence            1122 24555667888999887644211  11100000000    0              00000         000012


Q ss_pred             eeCCCCcEEEEEeC-----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671         424 AQCPEGEKLVSGSD-----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG  492 (573)
Q Consensus       424 ~~~~~~~~l~sg~~-----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~  492 (573)
                      +.+|++..+..+..           .++|.+||+.+.+ .+..+..+.  +.+++|+|||++|++++. ++|.+||..++
T Consensus       260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-RVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP  335 (361)
T ss_dssp             EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-EEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred             EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-EEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence            33466666555432           3589999988764 455666655  899999999999998886 99999999999


Q ss_pred             --eEEEeecCCcceEEEEEECCCCC
Q psy2671         493 --KFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       493 --~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                        +.+..+..+......++++|||+
T Consensus       336 ~l~~~~~i~~~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          336 EPKLLRTIEGAAEASLQVQFHPVGG  360 (361)
T ss_dssp             SCEEEEEETTSCSSEEEEEECCCSC
T ss_pred             cceeeEEeccCCCCcEEEEecCCCC
Confidence              99988866666778899999986

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.77  E-value=5.6e-17  Score=173.65  Aligned_cols=285  Identities=14%  Similarity=0.065  Sum_probs=191.9

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEE--eCCCeEEEEECCCCeeeEEecCCCCcEE---------EEEEc--CCCCe-EEEEe
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASG--SGDTTVRFWDVTTQTPLFKCEGHKHWVL---------CIAWS--PDSKQ-LVSGC  268 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~--s~d~~i~iwd~~~~~~~~~~~~h~~~V~---------~v~~s--~dg~~-l~sgs  268 (573)
                      +.+|...+..++|++++-++++.  +.++...||....+.....+..|...+.         ...|+  |||++ |+.++
T Consensus        19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~   98 (662)
T 3azo_A           19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTH   98 (662)
T ss_dssp             HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEB
T ss_pred             HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEE
Confidence            44688999999999887677777  5688999999654444566666765555         56665  99998 77654


Q ss_pred             e-CCeEEEEECC--C-CceecccccC-----CcccEEEEEecccccCCCCCEEEEEeCC----------CcEEEEECCC-
Q psy2671         269 K-NGVIHAWDSS--T-GKQIGQPMRG-----HKQWITALSWEPFHLNHQCRRFASSGKD----------GAIRIWDVIL-  328 (573)
Q Consensus       269 ~-dg~i~vwd~~--~-~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~-  328 (573)
                      . +..|.+|++.  . +..  ..+..     |...+..++|+|     +++.|+.++.+          ..|++||+.. 
T Consensus        99 ~~~~~l~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~sp-----Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~  171 (662)
T 3azo_A           99 FGDQRLYAFEPDAPGGAVP--RPLTPVSAVGGGLRWADPVLLP-----ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS  171 (662)
T ss_dssp             TTTCCEEEECTTSTTCCCC--EECSCCCCSTTCEEEEEEEEET-----TTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred             CCCCeEEEEcCCCCCCCCC--EeccCCccCCCCccccCcEECC-----CCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence            4 5667777775  2 432  22333     566788888876     67889888776          5899999987 


Q ss_pred             -----CeEEEEec-CCCccEEEEEECCCc-EEEEEeCC--------CeEEEEeCC-CC---eeeEeccCCcceeeEEEec
Q psy2671         329 -----SQCVRVLT-SHTRSVTCIRWGGSG-LIYSASQD--------RTIKVWRAS-DG---VMCRTLEGHAHWVNTLALS  389 (573)
Q Consensus       329 -----~~~~~~~~-~h~~~v~~~~~~~~~-~l~s~s~d--------~~i~vw~~~-~~---~~~~~~~~~~~~v~~~~~s  389 (573)
                           +.. ..+. .+...+..+.|+++| .|+.++.+        ..|.+|++. ++   .......+|...+..++++
T Consensus       172 ~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s  250 (662)
T 3azo_A          172 AAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA  250 (662)
T ss_dssp             TTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred             ccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence                 544 4455 556778889999998 56666644        379999998 56   3333333344444444444


Q ss_pred             cCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC--eEEEEcCCCCccceeeec-ccccc----
Q psy2671         390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF--TLFLWNPEKEKKSLARMT-GHQQL----  462 (573)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~lwd~~~~~~~~~~~~-~h~~~----  462 (573)
                                                           |+|++++++..++  .|.+||+.++.  ...+. .+...    
T Consensus       251 -------------------------------------pdg~l~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~~p~  291 (662)
T 3azo_A          251 -------------------------------------PDGSLIVATDRTGWWNLHRVDPATGA--ATQLCRREEEFAGPL  291 (662)
T ss_dssp             -------------------------------------TTSCEEEEECTTSSCEEEEECTTTCC--EEESSCCSSBSSCCC
T ss_pred             -------------------------------------CCCeEEEEECCCCCeEEEEEECCCCc--eeecccccccccCcc
Confidence                                                 5677777777787  66777764432  22222 22221    


Q ss_pred             ----EEEEEECCCCCEEEEeeCCCcEEEE--eCCCCeEEEeecCCcceEEEE-EECCCCCEEEEEeCCCc--EEEEeCCc
Q psy2671         463 ----INCVEFSPDGRIIASASFDKSIKLW--DGRIGKFITTLRGHVQAVYMV-AWSSDSRLLVSGSADST--LKVWNMKT  533 (573)
Q Consensus       463 ----v~~v~~sp~g~~las~s~dg~i~lw--d~~~~~~~~~~~~h~~~v~~v-~~s~dg~~las~s~D~~--v~vwd~~~  533 (573)
                          +.+++|+|+++++++++. +.++||  |..+++ +..+..|...+..+ +++++.-++++++.+..  |.+||+.+
T Consensus       292 w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~  369 (662)
T 3azo_A          292 WTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVT  369 (662)
T ss_dssp             CSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred             ccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence                467899999999999998 999999  666665 67787787777776 55443334445565654  55556666


Q ss_pred             ccc
Q psy2671         534 KKI  536 (573)
Q Consensus       534 ~~~  536 (573)
                      ++.
T Consensus       370 g~~  372 (662)
T 3azo_A          370 GRA  372 (662)
T ss_dssp             CCE
T ss_pred             Cce
Confidence            654

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.76  E-value=2.2e-17  Score=164.99  Aligned_cols=295  Identities=10%  Similarity=0.049  Sum_probs=183.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeC---CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEE
Q psy2671         109 HAEAVISVKFSPNGRSLASGSG---DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVY  185 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~---D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (573)
                      |...+.+++|||||++||.++.   +..|.+||+.+++....                                      
T Consensus        34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l--------------------------------------   75 (396)
T 3c5m_A           34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQL--------------------------------------   75 (396)
T ss_dssp             ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEEC--------------------------------------
T ss_pred             cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEe--------------------------------------
Confidence            3344667789999999887754   34688888876642100                                      


Q ss_pred             eceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         186 QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                                       ..++......+.|||||++|+.++.++.|.+||+.+++.......+..      |+++|+.|+
T Consensus        76 -----------------~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~g~~l~  132 (396)
T 3c5m_A           76 -----------------TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE------WKGYGTWVA  132 (396)
T ss_dssp             -----------------CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT------EEEEEEEEE
T ss_pred             -----------------ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc------cCCCCCEEE
Confidence                             011111122367999999999999999999999998876554444443      677888888


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE-----eCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-----GKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      ..+.+....+|...                  .     ..+++++.++..     ..+..|.+||+.+++..... .+..
T Consensus       133 ~~~~~~~~~~~~~~------------------~-----~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~  188 (396)
T 3c5m_A          133 NSDCTKLVGIEILK------------------R-----DWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTA  188 (396)
T ss_dssp             CTTSSEEEEEEEEG------------------G-----GCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESS
T ss_pred             eccCCccccccccc------------------c-----ccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCc
Confidence            77766666665410                  0     011233333322     34567899999887655443 4566


Q ss_pred             cEEEEEECC-Cc-EEEEEeCC------CeEEEEeCCCCeeeEeccCC-cceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         341 SVTCIRWGG-SG-LIYSASQD------RTIKVWRASDGVMCRTLEGH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       341 ~v~~~~~~~-~~-~l~s~s~d------~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      .+..+.|++ ++ .++..+.+      ..|.+|++..+......... ...+..+++                       
T Consensus       189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~-----------------------  245 (396)
T 3c5m_A          189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFW-----------------------  245 (396)
T ss_dssp             CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEE-----------------------
T ss_pred             ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEE-----------------------
Confidence            788999998 55 45555443      35777887654432222211 112333333                       


Q ss_pred             hhhhhhhhhheeeeCCCCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECC-CCCEEEEee-----
Q psy2671         412 EESSKHALAKYQAQCPEGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSP-DGRIIASAS-----  479 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp-~g~~las~s-----  479 (573)
                                    +|+|+.|+.++.+     +.|++||+.++... +....+    .. +.|+| ||++++.++     
T Consensus       246 --------------spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~l~~~~~~~p~  306 (396)
T 3c5m_A          246 --------------IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSLMVGDGCDAPV  306 (396)
T ss_dssp             --------------CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSEEEEEECCC--
T ss_pred             --------------CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCceEEEecCCcce
Confidence                          3667766666543     45999998765432 111211    23 88999 999988765     


Q ss_pred             -----------CCCcEEEEeCCCCeEEEeecCCcc-----------eEEEEEECCCCCEEEEEeC-CCcEEEEeC
Q psy2671         480 -----------FDKSIKLWDGRIGKFITTLRGHVQ-----------AVYMVAWSSDSRLLVSGSA-DSTLKVWNM  531 (573)
Q Consensus       480 -----------~dg~i~lwd~~~~~~~~~~~~h~~-----------~v~~v~~s~dg~~las~s~-D~~v~vwd~  531 (573)
                                 .++.|.+||..+++. ..+..+..           .+..++|+|||+.|+.++. ++...+|.+
T Consensus       307 ~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~  380 (396)
T 3c5m_A          307 DVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA  380 (396)
T ss_dssp             --------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             eeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence                       347899999988764 23333332           1456789999998887664 555555544

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.76  E-value=2.8e-17  Score=164.21  Aligned_cols=290  Identities=14%  Similarity=0.101  Sum_probs=178.4

Q ss_pred             EEECCCCeeeEEecCCCCc-----EEEEEEcCCCCeEEEEeeC---CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         233 FWDVTTQTPLFKCEGHKHW-----VLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       233 iwd~~~~~~~~~~~~h~~~-----V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                      ..|..++..+..+..+...     +.+++|||||++|+.....   ..|.+||+.+++.. ....++........|    
T Consensus        14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~----   88 (396)
T 3c5m_A           14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFI----   88 (396)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEE----
T ss_pred             eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceE----
Confidence            3466666666666554333     6778999999998876543   47889999887643 222222211111334    


Q ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEE---E----------------EECCCcE-EEEE-----eCC
Q psy2671         305 LNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTC---I----------------RWGGSGL-IYSA-----SQD  359 (573)
Q Consensus       305 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~---~----------------~~~~~~~-l~s~-----s~d  359 (573)
                       +++++.|+.++.++.|++||+..++.......+......   +                .|++++. ++..     ..+
T Consensus        89 -spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~  167 (396)
T 3c5m_A           89 -STDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPT  167 (396)
T ss_dssp             -CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCC
T ss_pred             -CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCc
Confidence             447889999999999999999888766555544432222   1                2333331 1111     355


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC-
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD-  438 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-  438 (573)
                      ..|.+||+.++...... .+...+..+.++++                                    ++..++..+.+ 
T Consensus       168 ~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~------------------------------------dg~~l~~~~~~~  210 (396)
T 3c5m_A          168 CRLIKVDIETGELEVIH-QDTAWLGHPIYRPF------------------------------------DDSTVGFCHEGP  210 (396)
T ss_dssp             EEEEEEETTTCCEEEEE-EESSCEEEEEEETT------------------------------------EEEEEEEEECSC
T ss_pred             ceEEEEECCCCcEEeec-cCCcccccceECCC------------------------------------CCCEEEEEecCC
Confidence            67888888776543322 23333444444430                                    34445444432 


Q ss_pred             -----CeEEEEcCCCCccceeeeccc--cccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         439 -----FTLFLWNPEKEKKSLARMTGH--QQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       439 -----g~i~lwd~~~~~~~~~~~~~h--~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                           ..|.+|++....  ...+..+  ...+..++|+|||+.|+.++.+     +.|++||+.+++........  ...
T Consensus       211 ~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~  286 (396)
T 3c5m_A          211 HDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS  286 (396)
T ss_dssp             SSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE
T ss_pred             CCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC
Confidence                 357788875432  1222222  2357889999999988777544     44999999888653322211  122


Q ss_pred             EEEECC-CCCEEEEEe----------------CCCcEEEEeCCcccccccccCcCC-----------CEEEEEEccCCCE
Q psy2671         507 MVAWSS-DSRLLVSGS----------------ADSTLKVWNMKTKKIEQDLPGHGD-----------EVYAVDWAPDGEK  558 (573)
Q Consensus       507 ~v~~s~-dg~~las~s----------------~D~~v~vwd~~~~~~~~~l~~h~~-----------~v~~~~~s~d~~~  558 (573)
                       ++|+| ||++++.++                .+..|++||+.+++.. .+..+..           .+..+.|+|||++
T Consensus       287 -~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~  364 (396)
T 3c5m_A          287 -HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDG  364 (396)
T ss_dssp             -EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred             -CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCe
Confidence             88999 999988765                3478999999887643 3444443           2566789999999


Q ss_pred             EEEeeC-CCcEEEc
Q psy2671         559 VASGGK-DKVLRLW  571 (573)
Q Consensus       559 l~s~~~-d~~i~iw  571 (573)
                      |+.++. ++...+|
T Consensus       365 l~~~s~~~~~~~l~  378 (396)
T 3c5m_A          365 VLFTSDFEGVPAIY  378 (396)
T ss_dssp             EEEEECTTSSCEEE
T ss_pred             EEEEecCCCCceEE
Confidence            887764 5565665

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.75  E-value=2.7e-15  Score=142.63  Aligned_cols=242  Identities=14%  Similarity=0.207  Sum_probs=164.4

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec------CCCCcEEEEEE-cCCCCeEEEEee-CCeE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE------GHKHWVLCIAW-SPDSKQLVSGCK-NGVI  273 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~-s~dg~~l~sgs~-dg~i  273 (573)
                      ...+|...+.+++++|+|+.+++.+.++.|.+||.. ++.+..+.      +|...+.++++ .+++..+++... ++.|
T Consensus        24 ~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i  102 (286)
T 1q7f_A           24 VMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI  102 (286)
T ss_dssp             SSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred             CCCCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence            345778889999999999988888889999999987 44444442      34457899999 567765555533 8999


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCccEEEEEECCCc
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSG  351 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~  351 (573)
                      .+|| .+++.+......+...+.++++.|     +++.+++...++.|++||.. ++....+.  .+...+.++++++++
T Consensus       103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g  175 (286)
T 1q7f_A          103 QIYN-QYGQFVRKFGATILQHPRGVTVDN-----KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ  175 (286)
T ss_dssp             EEEC-TTSCEEEEECTTTCSCEEEEEECT-----TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSS
T ss_pred             EEEC-CCCcEEEEecCccCCCceEEEEeC-----CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCC
Confidence            9999 455544332223445677777655     56677777778889999854 44444332  333456667776665


Q ss_pred             EEEEE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc
Q psy2671         352 LIYSA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE  430 (573)
Q Consensus       352 ~l~s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (573)
                      .++.+ +.++.|.+|+.. +..                                                          
T Consensus       176 ~l~v~~~~~~~i~~~~~~-g~~----------------------------------------------------------  196 (286)
T 1q7f_A          176 EIFISDNRAHCVKVFNYE-GQY----------------------------------------------------------  196 (286)
T ss_dssp             EEEEEEGGGTEEEEEETT-CCE----------------------------------------------------------
T ss_pred             CEEEEECCCCEEEEEcCC-CCE----------------------------------------------------------
Confidence            44433 345666666542 111                                                          


Q ss_pred             EEEEEeCCCeEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeCCC-cEEEEeCCCCeEEEeecCCc--ceE
Q psy2671         431 KLVSGSDDFTLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDK-SIKLWDGRIGKFITTLRGHV--QAV  505 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~dg-~i~lwd~~~~~~~~~~~~h~--~~v  505 (573)
                                            +..+.  ++...+..++++|+|+++++...++ .|.+||. .++.+..+..+.  ..+
T Consensus       197 ----------------------~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~  253 (286)
T 1q7f_A          197 ----------------------LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC  253 (286)
T ss_dssp             ----------------------EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred             ----------------------EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence                                  11111  1123577899999999999888776 9999995 566666665443  347


Q ss_pred             EEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         506 YMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      ..++++|+|+++++ +.|++|++|++...
T Consensus       254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          254 FDVALMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             eeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence            79999999987777 57999999998653

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.75  E-value=1.4e-15  Score=147.66  Aligned_cols=244  Identities=12%  Similarity=0.113  Sum_probs=166.9

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCC------------------------CeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCC
Q psy2671         207 AEAVISVKFSPNGRSLASGSGD------------------------TTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDS  261 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d------------------------~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg  261 (573)
                      .+.+.+++++|+|+.+++.+.+                        ++|.+||..+++.+.... ++-.....++++|+|
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            4679999999999999888877                        479999998887765543 455678999999999


Q ss_pred             CeEEEEeeCCeEEEEECCCCc-eecccc--------cCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeE
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGK-QIGQPM--------RGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQC  331 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~-~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~  331 (573)
                      +.+++...++.|++||..... .+...-        .++-.....+++.|.    +++.+++.+ .++.|++|+ ..+..
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~----~g~lyv~d~~~~~~I~~~~-~~g~~  177 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS----TGAVFVSDGYCNSRIVQFS-PSGKF  177 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT----TCCEEEEECSSCCEEEEEC-TTSCE
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC----CCeEEEEeCCCCCeEEEEc-CCCCE
Confidence            988888889999999986542 111110        233446778887652    456777776 689999999 45555


Q ss_pred             EEEecC----------CCccEEEEEECCC-cEEE-EEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         332 VRVLTS----------HTRSVTCIRWGGS-GLIY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       332 ~~~~~~----------h~~~v~~~~~~~~-~~l~-s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      +..+..          +......++++++ +.++ +...++.|++|+..+|..+..+..                     
T Consensus       178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~---------------------  236 (329)
T 3fvz_A          178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH---------------------  236 (329)
T ss_dssp             EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC---------------------
T ss_pred             EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec---------------------
Confidence            554431          1122555666554 4333 333455566665544433322210                     


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECC------CCC
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP------DGR  473 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp------~g~  473 (573)
                                                                               ..+...+..++|+|      +|+
T Consensus       237 ---------------------------------------------------------~~~~~~~~~~~~~pg~~~~~~g~  259 (329)
T 3fvz_A          237 ---------------------------------------------------------ASFGRNVFAISYIPGFLFAVNGK  259 (329)
T ss_dssp             ---------------------------------------------------------TTTTTCEEEEEEETTEEEEEECC
T ss_pred             ---------------------------------------------------------cccCCCcceeeecCCEEEEeCCC
Confidence                                                                     12233456667777      444


Q ss_pred             EEEEeeCCCcEEEEeCCCCeEEEee---cCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         474 IIASASFDKSIKLWDGRIGKFITTL---RGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~~~~~~~~---~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      ..++...+..|++||..+++.+..+   .++......++++|+|.++++...++.|++|++..
T Consensus       260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            4444445668999999999988887   46777789999999998888888999999999864

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.74  E-value=1.3e-16  Score=157.47  Aligned_cols=249  Identities=10%  Similarity=0.070  Sum_probs=162.7

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECC-CCeeeEEec--CCCCcEEEEEEcCCCCe--EEEEe-------------e
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVT-TQTPLFKCE--GHKHWVLCIAWSPDSKQ--LVSGC-------------K  269 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~-~~~~~~~~~--~h~~~V~~v~~s~dg~~--l~sgs-------------~  269 (573)
                      ..+..++|+|+|++|++++.+ .|.+|++. +++......  .+. ...+++|+|||++  ++++.             .
T Consensus        40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~  117 (365)
T 1jof_A           40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence            456789999999999999888 99999987 676543222  112 2456899999994  55653             6


Q ss_pred             CCeEEEEECCC-Cceeccccc----CCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECC-CCeEE--EEec--CC
Q psy2671         270 NGVIHAWDSST-GKQIGQPMR----GHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI-LSQCV--RVLT--SH  338 (573)
Q Consensus       270 dg~i~vwd~~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~-~~~~~--~~~~--~h  338 (573)
                      +|.+.+|++.. ++... .+.    .+...+.++.|.|     +++++++++ .++.|++|++. +++..  ..+.  .|
T Consensus       118 ~g~v~v~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~sp-----dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~  191 (365)
T 1jof_A          118 AGYGNVFSVSETGKLEK-NVQNYEYQENTGIHGMVFDP-----TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP  191 (365)
T ss_dssp             CCEEEEEEECTTCCEEE-EEEEEECCTTCCEEEEEECT-----TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred             CceEEEEccCCCCcCcc-eEeeEEeCCCCcceEEEECC-----CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence            89999999873 54321 111    2445678888776     667777665 46899999997 56543  2232  23


Q ss_pred             CccEEEEEECCCc-EEEEEeC-CCeEEEEeCC--CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671         339 TRSVTCIRWGGSG-LIYSASQ-DRTIKVWRAS--DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES  414 (573)
Q Consensus       339 ~~~v~~~~~~~~~-~l~s~s~-d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  414 (573)
                      ...+..++|++++ .+++++. ++++.+|+..  ++.......                                     
T Consensus       192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~-------------------------------------  234 (365)
T 1jof_A          192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH-------------------------------------  234 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE-------------------------------------
T ss_pred             CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc-------------------------------------
Confidence            5568888888887 5666554 6788888653  222110000                                     


Q ss_pred             hhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccc------cEEEEE-ECCCCCEEEEeeCCC-----
Q psy2671         415 SKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ------LINCVE-FSPDGRIIASASFDK-----  482 (573)
Q Consensus       415 ~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~------~v~~v~-~sp~g~~las~s~dg-----  482 (573)
                                               .  +-.+..      ...+|..      .+..++ |+|||++|+++..+.     
T Consensus       235 -------------------------~--~~~~~~------~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~  281 (365)
T 1jof_A          235 -------------------------S--FPLIPP------GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ  281 (365)
T ss_dssp             -------------------------E--EESSCT------TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred             -------------------------e--EEcCCC------CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCC
Confidence                                     0  000000      0012222      478899 999999888765432     


Q ss_pred             -cEEEEeCC-CCeEEE---eecCCcceEEEEEECC---CCCEEEEEeCC-CcEEEEeCCcc
Q psy2671         483 -SIKLWDGR-IGKFIT---TLRGHVQAVYMVAWSS---DSRLLVSGSAD-STLKVWNMKTK  534 (573)
Q Consensus       483 -~i~lwd~~-~~~~~~---~~~~h~~~v~~v~~s~---dg~~las~s~D-~~v~vwd~~~~  534 (573)
                       .|.+|++. +++...   ....+......++|+|   ||++|++++.+ +.|++|++...
T Consensus       282 ~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          282 GYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence             89999985 566443   2333444456789999   89999999864 89999998765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.74  E-value=3e-15  Score=146.63  Aligned_cols=270  Identities=12%  Similarity=0.131  Sum_probs=178.1

Q ss_pred             CcEEEEEEcCCCCeEEEEe---------CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC---C--eE
Q psy2671         208 EAVISVKFSPNGRSLASGS---------GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN---G--VI  273 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s---------~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d---g--~i  273 (573)
                      ..+...++  ||++++...         .++.|.+||+.+++... +    ..+.+++|||||++|+.++.+   +  .|
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l   87 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEI   87 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceE
Confidence            45677778  898887652         26789999998876532 3    457889999999999987764   3  47


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeC---------------------------CCcEEEEEC
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK---------------------------DGAIRIWDV  326 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~---------------------------dg~v~iwd~  326 (573)
                      .+|++.+++...  +..+.. +..+.|.|     +++.|+.++.                           ...|.+||+
T Consensus        88 ~~~~~~~g~~~~--l~~~~~-~~~~~wsp-----dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~  159 (347)
T 2gop_A           88 WVADLETLSSKK--ILEAKN-IRSLEWNE-----DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT  159 (347)
T ss_dssp             EEEETTTTEEEE--EEEESE-EEEEEECT-----TSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred             EEEECCCCceEE--EEcCCC-ccceeECC-----CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence            888888775432  222223 78888876     6677777653                           256899999


Q ss_pred             CCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC-------eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc
Q psy2671         327 ILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR-------TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT  399 (573)
Q Consensus       327 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~-------~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~  399 (573)
                      .+++.++.+.. . .+..+.|++++.+++++.+.       ...+|.+.++.. ..+..+ ..+..              
T Consensus       160 ~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~--------------  221 (347)
T 2gop_A          160 ESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYA--------------  221 (347)
T ss_dssp             TTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEE--------------
T ss_pred             CCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC-cceee--------------
Confidence            88876444544 3 77889999999666665542       345554433332 111111 11110              


Q ss_pred             CCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC--------CeEEEEcCCCCccceeeeccccccEEE-EEECC
Q psy2671         400 STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD--------FTLFLWNPEKEKKSLARMTGHQQLINC-VEFSP  470 (573)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--------g~i~lwd~~~~~~~~~~~~~h~~~v~~-v~~sp  470 (573)
                                               .+|+|+.++.++.+        ..|.+||  ++ .......++...+.. +.|+ 
T Consensus       222 -------------------------~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~~~~~~~~~~~~~~s-  272 (347)
T 2gop_A          222 -------------------------VDSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGILDEVDRGVGQAKIKD-  272 (347)
T ss_dssp             -------------------------EEECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEESSTTCCSEEEEEEEET-
T ss_pred             -------------------------ECCCCCEEEEEEccccCCccccceEEEEC--CC-ceEeccccCCcccCCccEEc-
Confidence                                     13677777776644        3688888  22 222333455667876 9999 


Q ss_pred             CCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcE-EEEeCCcccccccccCcCCC
Q psy2671         471 DGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL-KVWNMKTKKIEQDLPGHGDE  546 (573)
Q Consensus       471 ~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v-~vwd~~~~~~~~~l~~h~~~  546 (573)
                      || ++++++.++.++|| ..+++....+ .+...|.+++|+|  .++++++.++.. .+|.+. ++ ...+..|+..
T Consensus       273 dg-~~~~~~~~~~~~l~-~~~g~~~~~~-~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~  342 (347)
T 2gop_A          273 GK-VYFTLFEEGSVNLY-IWDGEIKPIA-KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP  342 (347)
T ss_dssp             TE-EEEEEEETTEEEEE-EESSSEEEEE-CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred             Cc-EEEEEecCCcEEEE-EcCCceEEEe-cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence            88 99999999999999 7766654433 4467899999999  677777777664 777776 44 3445555543

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.72  E-value=1.2e-14  Score=138.00  Aligned_cols=234  Identities=15%  Similarity=0.239  Sum_probs=166.9

Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec------CCCccEEEEEE-CCCcEEEEEeC--CC
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT------SHTRSVTCIRW-GGSGLIYSASQ--DR  360 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------~h~~~v~~~~~-~~~~~l~s~s~--d~  360 (573)
                      ++-....++++.+     +++.+++...++.|++||.. ++....+.      +|...+..+++ .+++.++.+..  ++
T Consensus        27 g~~~~p~~v~~~~-----~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~  100 (286)
T 1q7f_A           27 GQFTEPSGVAVNA-----QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTH  100 (286)
T ss_dssp             TCBSCEEEEEECT-----TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGC
T ss_pred             CccCCCceEEECC-----CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCC
Confidence            4445677777654     56778888889999999987 55555443      24457889999 57777777664  89


Q ss_pred             eEEEEeCCCCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         361 TIKVWRASDGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      .|.+|+ .++.....+.. +......+++                                     .++|.++++...++
T Consensus       101 ~i~~~d-~~g~~~~~~~~~~~~~~~~i~~-------------------------------------~~~g~l~v~~~~~~  142 (286)
T 1q7f_A          101 QIQIYN-QYGQFVRKFGATILQHPRGVTV-------------------------------------DNKGRIIVVECKVM  142 (286)
T ss_dssp             EEEEEC-TTSCEEEEECTTTCSCEEEEEE-------------------------------------CTTSCEEEEETTTT
T ss_pred             EEEEEC-CCCcEEEEecCccCCCceEEEE-------------------------------------eCCCCEEEEECCCC
Confidence            999999 55655544422 2222333333                                     25677777777889


Q ss_pred             eEEEEcCCCCccceeeec--cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC--cceEEEEEECCCCC
Q psy2671         440 TLFLWNPEKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH--VQAVYMVAWSSDSR  515 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~--~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h--~~~v~~v~~s~dg~  515 (573)
                      .|++||....  ....+.  ++...+..++++|+|+++++.+.++.|++||. .++.+..+..+  ......++++++|+
T Consensus       143 ~i~~~~~~g~--~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~  219 (286)
T 1q7f_A          143 RVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE  219 (286)
T ss_dssp             EEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred             EEEEEcCCCC--EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC
Confidence            9999996532  222222  34456899999999998888888999999997 45666666433  35788999999999


Q ss_pred             EEEEEeCCC-cEEEEeCCcccccccccCcC--CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         516 LLVSGSADS-TLKVWNMKTKKIEQDLPGHG--DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       516 ~las~s~D~-~v~vwd~~~~~~~~~l~~h~--~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++...++ .|++|+.. ++.+..+..+.  ..+.+++++|+|+.+++ +.|++|++|+
T Consensus       220 l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~  277 (286)
T 1q7f_A          220 ILIADNHNNFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYR  277 (286)
T ss_dssp             EEEEECSSSCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEE
T ss_pred             EEEEeCCCCEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEE
Confidence            988888886 99999964 45555554433  34789999999987666 6799999997

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.72  E-value=3e-15  Score=145.39  Aligned_cols=248  Identities=10%  Similarity=0.113  Sum_probs=173.6

Q ss_pred             CCcEEEEEEcCCCCeEEEEeeC------------------------CeEEEEECCCCceecccccCCcccEEEEEecccc
Q psy2671         249 KHWVLCIAWSPDSKQLVSGCKN------------------------GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH  304 (573)
Q Consensus       249 ~~~V~~v~~s~dg~~l~sgs~d------------------------g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~  304 (573)
                      -..+.+|+++|+|+.+++.+.+                        +.|.+||..+++.......++-....++++.|  
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~--  100 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT--  100 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT--
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC--
Confidence            3568999999999988877776                        47999999888765433334445677887764  


Q ss_pred             cCCCCCEEEEEeCCCcEEEEECCCCe-EEEEe---------cCCCccEEEEEECC-CcEEEEEe--CCCeEEEEeCCCCe
Q psy2671         305 LNHQCRRFASSGKDGAIRIWDVILSQ-CVRVL---------TSHTRSVTCIRWGG-SGLIYSAS--QDRTIKVWRASDGV  371 (573)
Q Consensus       305 ~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~---------~~h~~~v~~~~~~~-~~~l~s~s--~d~~i~vw~~~~~~  371 (573)
                         +++.+++...++.|+.||..... .+..+         ..+......+++++ ++.++.+.  .++.|++|+. +|.
T Consensus       101 ---~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~  176 (329)
T 3fvz_A          101 ---DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGK  176 (329)
T ss_dssp             ---TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSC
T ss_pred             ---CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCC
Confidence               66788888889999999975442 33433         23444677888876 56555444  4777887773 333


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK  451 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~  451 (573)
                      ....+..                                                        .+ .+     +.     
T Consensus       177 ~~~~~~~--------------------------------------------------------~g-~~-----~~-----  189 (329)
T 3fvz_A          177 FVTQWGE--------------------------------------------------------ES-SG-----SS-----  189 (329)
T ss_dssp             EEEEECE--------------------------------------------------------EC-CS-----SS-----
T ss_pred             EEEEecc--------------------------------------------------------CC-CC-----CC-----
Confidence            2221110                                                        00 00     00     


Q ss_pred             ceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECC------CCCEEEEEeC
Q psy2671         452 SLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSS------DSRLLVSGSA  522 (573)
Q Consensus       452 ~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~------dg~~las~s~  522 (573)
                         ...++-.....|+++|+ |.++++...++.|++||..+++.+..+.  .+...++.++|+|      +|+..++.+.
T Consensus       190 ---~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~  266 (329)
T 3fvz_A          190 ---PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQE  266 (329)
T ss_dssp             ---CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSC
T ss_pred             ---CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCC
Confidence               00112234688999998 7888888889999999999898888874  4566788999999      3333333344


Q ss_pred             CCcEEEEeCCcccccccc---cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         523 DSTLKVWNMKTKKIEQDL---PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       523 D~~v~vwd~~~~~~~~~l---~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +..|++|++.+++.+..+   .++.....+++++|+|..+++...++.|++|+
T Consensus       267 ~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~  319 (329)
T 3fvz_A          267 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFT  319 (329)
T ss_dssp             CCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEE
T ss_pred             CcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEe
Confidence            558999999999887776   46777899999999998888888899999985

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.72  E-value=1e-13  Score=143.09  Aligned_cols=328  Identities=16%  Similarity=0.084  Sum_probs=214.7

Q ss_pred             CCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeecccc
Q psy2671         120 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRC  199 (573)
Q Consensus       120 ~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (573)
                      |.+.++++...+++|.++|..+++.+..+.                                                  
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~--------------------------------------------------  194 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD--------------------------------------------------  194 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEE--------------------------------------------------
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEe--------------------------------------------------
Confidence            455677888889999999998876543211                                                  


Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECC--CCeeeEEecCCCCcEEEEEEc----CCCCeEEEEee-CCe
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT--TQTPLFKCEGHKHWVLCIAWS----PDSKQLVSGCK-NGV  272 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~--~~~~~~~~~~h~~~V~~v~~s----~dg~~l~sgs~-dg~  272 (573)
                            ....+..+.|||||+++++++.|+.|.+||+.  +++.+.++.... ....++|+    |||++++++.. +++
T Consensus       195 ------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~  267 (567)
T 1qks_A          195 ------TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQ  267 (567)
T ss_dssp             ------CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred             ------CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCe
Confidence                  11245688999999999999999999999995  777776665433 35789999    69999887665 589


Q ss_pred             EEEEECCCCceeccccc-C--------Ccc-cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-cCCCcc
Q psy2671         273 IHAWDSSTGKQIGQPMR-G--------HKQ-WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-TSHTRS  341 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~-~--------h~~-~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~  341 (573)
                      |.++|..+.+.+..... +        |.. .+.++...+.    ....++....+|.|.++|....+..... ......
T Consensus       268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~----~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~  343 (567)
T 1qks_A          268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY----RPEFIVNVKETGKILLVDYTDLNNLKTTEISAERF  343 (567)
T ss_dssp             EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS----SSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSS
T ss_pred             EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC----CCEEEEEecCCCeEEEEecCCCccceeeeeecccc
Confidence            99999988766532211 1        212 4555554442    1234566677899999998765322221 122334


Q ss_pred             EEEEEECCCc-EEEE-EeCCCeEEEEeCCCCeeeEeccC-CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         342 VTCIRWGGSG-LIYS-ASQDRTIKVWRASDGVMCRTLEG-HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       342 v~~~~~~~~~-~l~s-~s~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ...+.|++++ .+++ ...++.|.++|..+++....+.- -..+      ++.          .+               
T Consensus       344 ~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P------hpg----------~g---------------  392 (567)
T 1qks_A          344 LHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP------HPG----------RG---------------  392 (567)
T ss_dssp             EEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB------CCT----------TC---------------
T ss_pred             ccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC------CCc----------cc---------------
Confidence            6678898887 4444 44689999999999876544321 0000      000          00               


Q ss_pred             hhheeeeCCC-CcEEEEEe-CCCeEEEEcCCCC------ccceeeeccccccEEEEEECCCCCEEEEeeC-------CCc
Q psy2671         419 LAKYQAQCPE-GEKLVSGS-DDFTLFLWNPEKE------KKSLARMTGHQQLINCVEFSPDGRIIASASF-------DKS  483 (573)
Q Consensus       419 ~~~~~~~~~~-~~~l~sg~-~dg~i~lwd~~~~------~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-------dg~  483 (573)
                         .....|+ +...++.. .+++|.++|....      .+.+..+......-..+.++|+++++.+...       ..+
T Consensus       393 ---~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~  469 (567)
T 1qks_A          393 ---ANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS  469 (567)
T ss_dssp             ---EEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC
T ss_pred             ---eeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce
Confidence               0001244 34445554 5689999998752      2234444433222234778999999888653       358


Q ss_pred             EEEEeCCCC-----e-EEEeec--------CCcceEEEEEECCCCCEEEEEe-----CCCcEEEEeCCcccccccccC
Q psy2671         484 IKLWDGRIG-----K-FITTLR--------GHVQAVYMVAWSSDSRLLVSGS-----ADSTLKVWNMKTKKIEQDLPG  542 (573)
Q Consensus       484 i~lwd~~~~-----~-~~~~~~--------~h~~~v~~v~~s~dg~~las~s-----~D~~v~vwd~~~~~~~~~l~~  542 (573)
                      |.++|..+.     . ....+.        .-...+..+.|+|+|+.+..+.     .++.|.|+|.+++++...++.
T Consensus       470 v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~  547 (567)
T 1qks_A          470 VAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  547 (567)
T ss_dssp             EEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             EEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence            999998876     2 112221        1235788999999999877663     378999999999988777764

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.70  E-value=8.7e-15  Score=142.44  Aligned_cols=274  Identities=11%  Similarity=0.076  Sum_probs=178.3

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      .|.+++|++++..+++.+.++.++.|..   .+..                                             
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------------------------------------------   38 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTITA---EPWL---------------------------------------------   38 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEE---------------------------------------------
T ss_pred             ccceeeecCCccceeEEeecccCccccc---ceeE---------------------------------------------
Confidence            4677889999888888888899999932   1110                                             


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-  270 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-  270 (573)
                                .+.++...+.+++|+|+|+.++++..++.|.+||..+++.......+...+.+++|+|+|+.+++...+ 
T Consensus        39 ----------~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~  108 (333)
T 2dg1_A           39 ----------EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF  108 (333)
T ss_dssp             ----------EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred             ----------EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence                      112345567899999999987888889999999998876554443566779999999999877776666 


Q ss_pred             ---CeEEEEECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCc
Q psy2671         271 ---GVIHAWDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       271 ---g~i~vwd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                         +.|.+||.+++..... ....+...+..+.+.|     +++.+++...      .+.|..++...++... +..+..
T Consensus       109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-----~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~  182 (333)
T 2dg1_A          109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDS-----KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNIS  182 (333)
T ss_dssp             SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECT-----TSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEES
T ss_pred             CCCceEEEEeCCCCEEEEEEccCccCCcccceEECC-----CCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCC
Confidence               6899999887754211 1112345677777765     4566665543      2456566655444332 222233


Q ss_pred             cEEEEEECCCc-EEEE-EeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYS-ASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s-~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      .+..++|++++ .++. .+.++.|.+|+..+ +.....+..                                       
T Consensus       183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~---------------------------------------  223 (333)
T 2dg1_A          183 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA---------------------------------------  223 (333)
T ss_dssp             SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE---------------------------------------
T ss_pred             cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccc---------------------------------------
Confidence            46778888776 3443 34567777777642 211100000                                       


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                                       .......++ ..+..++++++|+++++...++.|.+||. .++.+..
T Consensus       224 ---------------------------------~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~  268 (333)
T 2dg1_A          224 ---------------------------------TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQ  268 (333)
T ss_dssp             ---------------------------------EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEE
T ss_pred             ---------------------------------eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEE
Confidence                                             000001111 24577999999998888888899999998 4666666


Q ss_pred             ecCCcc------eEEEEEECCCCCEEEEEeCC
Q psy2671         498 LRGHVQ------AVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       498 ~~~h~~------~v~~v~~s~dg~~las~s~D  523 (573)
                      +..+..      .+.+++|+||++.|+.++.+
T Consensus       269 ~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          269 ILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             EECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             EEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            654432      67899999998777666554

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.70  E-value=6.6e-13  Score=126.69  Aligned_cols=283  Identities=6%  Similarity=-0.004  Sum_probs=188.1

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      ++.+...+.++++.|+|+..++...++.|.+||.. +... .....+...+.+++++++|..+++...++.|..|+.. +
T Consensus        10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g   87 (299)
T 2z2n_A           10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G   87 (299)
T ss_dssp             CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence            34556789999999999977777668899999988 4432 2223345678999999999877776668899999986 3


Q ss_pred             ceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEe-CC
Q psy2671         282 KQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSAS-QD  359 (573)
Q Consensus       282 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s-~d  359 (573)
                      +............+.++.+.+     +++.+++...++.|..||. .++.... ...+...+.++++.+++.++.+. .+
T Consensus        88 ~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~  161 (299)
T 2z2n_A           88 IIKEYTLPNPDSAPYGITEGP-----NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN  161 (299)
T ss_dssp             CEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT
T ss_pred             cEEEEeCCCcCCCceeeEECC-----CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC
Confidence            322111222344567777654     5567777767889999998 4443332 33345668899998888666655 46


Q ss_pred             CeEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         360 RTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      +.|..|+. ++..... .......+..+++                                     .+++...++...+
T Consensus       162 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-------------------------------------~~~g~l~v~~~~~  203 (299)
T 2z2n_A          162 NAIGRITE-SGDITEFKIPTPASGPVGITK-------------------------------------GNDDALWFVEIIG  203 (299)
T ss_dssp             TEEEEECT-TCCEEEEECSSTTCCEEEEEE-------------------------------------CTTSSEEEEETTT
T ss_pred             CEEEEEcC-CCcEEEeeCCCCCCcceeEEE-------------------------------------CCCCCEEEEccCC
Confidence            88999988 5544321 1111122222222                                     2556666666678


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~l  517 (573)
                      +.|..|+. ++.........+...+.+++++++|+++++...++.|..||. .++.... +..+...+.++++ ++|++.
T Consensus       204 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~  280 (299)
T 2z2n_A          204 NKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIW  280 (299)
T ss_dssp             TEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEE
T ss_pred             ceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEE
Confidence            89999998 443222223334466899999999997777667889999998 4543322 3445567889999 888877


Q ss_pred             EEEeCCCcEEEEeCCccc
Q psy2671         518 VSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~  535 (573)
                      ++.+ .+.+..++.++++
T Consensus       281 v~~~-~~~l~~~~~~~~~  297 (299)
T 2z2n_A          281 FAME-CDKIGKLTLIKDN  297 (299)
T ss_dssp             EEET-TTEEEEEEEC---
T ss_pred             EEec-CCcEEEEEcCccc
Confidence            7665 5667777776543

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.70  E-value=3.4e-15  Score=145.33  Aligned_cols=273  Identities=14%  Similarity=0.131  Sum_probs=179.3

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ..|.+++|+|++..++..+.++.++.|   .+.....+..+...+.+++|+|+|+.++++..++.|.+||..+++... .
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-~   81 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-P   81 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-E
T ss_pred             cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-E
Confidence            346778899998888777889999999   345566666777788999999999977788889999999998876432 1


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCC----CcEEEEECCCCeEEEEec--CCCccEEEEEECCCcEEEEEeCCCe
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKD----GAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSGLIYSASQDRT  361 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~l~s~s~d~~  361 (573)
                      ...+...+.++++.|     +++.+++...+    +.|.+||...+.....+.  .+...+.++++.+++.++.++..+.
T Consensus        82 ~~~~~~~~~~i~~~~-----dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~  156 (333)
T 2dg1_A           82 FVSHKANPAAIKIHK-----DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY  156 (333)
T ss_dssp             EECSSSSEEEEEECT-----TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB
T ss_pred             eeCCCCCcceEEECC-----CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccc
Confidence            223456788888765     56677766665    689999987765543332  2334577777777665554443210


Q ss_pred             EEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeE
Q psy2671         362 IKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL  441 (573)
Q Consensus       362 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i  441 (573)
                            ..                                                                  ...+.|
T Consensus       157 ------~~------------------------------------------------------------------~~~~~l  164 (333)
T 2dg1_A          157 ------ST------------------------------------------------------------------NPLGGV  164 (333)
T ss_dssp             ------TT------------------------------------------------------------------BCCEEE
T ss_pred             ------cc------------------------------------------------------------------CCCceE
Confidence                  00                                                                  001122


Q ss_pred             EEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCC-CeEEE--------eecCCcceEEEEEEC
Q psy2671         442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRI-GKFIT--------TLRGHVQAVYMVAWS  511 (573)
Q Consensus       442 ~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~-~~~~~--------~~~~h~~~v~~v~~s  511 (573)
                      ..++.....  ...+..+...+..++|+|+|+.|+ +.+.++.|.+||..+ +..+.        .+.++ ..+..++++
T Consensus       165 ~~~~~~~~~--~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d  241 (333)
T 2dg1_A          165 YYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCID  241 (333)
T ss_dssp             EEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEB
T ss_pred             EEEeCCCCE--EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEEC
Confidence            223322111  111111123467899999998554 455678999999863 33221        12233 467789999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcC------CCEEEEEEccCCCEEEEeeCC
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG------DEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~------~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      ++|++.++...++.|.+||.. ++....+..+.      ..+.+++|+||++.|..++.+
T Consensus       242 ~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          242 SDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             TTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             CCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            999988888788999999984 44444443332      268899999998777655554

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.68  E-value=1.3e-12  Score=124.55  Aligned_cols=275  Identities=11%  Similarity=0.042  Sum_probs=182.7

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       247 ~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      .+...+.+++++++|+.+++...++.|.+||.. +.........+...+.++.+.+     +++.+++...++.|..|+.
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~   85 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-----DGEVWFTENAANKIGRITK   85 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECT
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-----CCCEEEeCCCCCeEEEECC
Confidence            344568999999999877766668899999988 5543222223345677777654     5667777666888999997


Q ss_pred             CCCeEE-EEecCCCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671         327 ILSQCV-RVLTSHTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGG  403 (573)
Q Consensus       327 ~~~~~~-~~~~~h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~  403 (573)
                      . ++.. ..+......+.++++.+++.++.+. .++.|..|+. ++..... ...+...+..+++               
T Consensus        86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~---------------  148 (299)
T 2z2n_A           86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITL---------------  148 (299)
T ss_dssp             T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE---------------
T ss_pred             C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEE---------------
Confidence            6 3322 2222345578899998888666654 5788999987 4433221 1111122222222               


Q ss_pred             eeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCc
Q psy2671         404 FKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS  483 (573)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~  483 (573)
                                            .+++...++...++.|..||. ++.........+...+.+++++++|+++++...++.
T Consensus       149 ----------------------~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~  205 (299)
T 2z2n_A          149 ----------------------GSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK  205 (299)
T ss_dssp             ----------------------CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE
T ss_pred             ----------------------cCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce
Confidence                                  255666776667789999998 433222222333456889999999998887777889


Q ss_pred             EEEEeCCCCeEEE-eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-ccccCcCCCEEEEEEccCCCEEEE
Q psy2671         484 IKLWDGRIGKFIT-TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       484 i~lwd~~~~~~~~-~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-~~l~~h~~~v~~~~~s~d~~~l~s  561 (573)
                      |..||. +++... .+..+...+..++++++|++.++...++.|..||.. ++.. ..+..+...+.++.+ ++++..++
T Consensus       206 i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~  282 (299)
T 2z2n_A          206 IGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFA  282 (299)
T ss_dssp             EEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEE
T ss_pred             EEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEE
Confidence            999998 665433 234455678899999999977776678899999984 4332 224455667999999 88887776


Q ss_pred             eeCCCcEEE
Q psy2671         562 GGKDKVLRL  570 (573)
Q Consensus       562 ~~~d~~i~i  570 (573)
                      .+.++.+++
T Consensus       283 ~~~~~l~~~  291 (299)
T 2z2n_A          283 MECDKIGKL  291 (299)
T ss_dssp             ETTTEEEEE
T ss_pred             ecCCcEEEE
Confidence            655554443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.67  E-value=4.2e-14  Score=138.36  Aligned_cols=252  Identities=10%  Similarity=0.117  Sum_probs=164.7

Q ss_pred             cEEEEEEcCCCCeEEEEe---------eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC---
Q psy2671         251 WVLCIAWSPDSKQLVSGC---------KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD---  318 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs---------~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d---  318 (573)
                      .+...++  ||++++...         .++.|.+||+.+++..  .+    ..+..+.|+|     ++++++..+.+   
T Consensus        16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--~l----~~~~~~~~Sp-----Dg~~la~~~~~~~~   82 (347)
T 2gop_A           16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR--FI----ENATMPRISP-----DGKKIAFMRANEEK   82 (347)
T ss_dssp             EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE--EE----ESCEEEEECT-----TSSEEEEEEEETTT
T ss_pred             EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE--Ec----ccCCCeEECC-----CCCEEEEEEeccCC
Confidence            4666777  888877542         3568999999887642  12    3466677765     67888877654   


Q ss_pred             C--cEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC---------------------------CCeEEEEeCC
Q psy2671         319 G--AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ---------------------------DRTIKVWRAS  368 (573)
Q Consensus       319 g--~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~---------------------------d~~i~vw~~~  368 (573)
                      +  .|.+|++..++.......+ . +..+.|++++ .|+.++.                           ...|.+|++.
T Consensus        83 ~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~  160 (347)
T 2gop_A           83 KVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE  160 (347)
T ss_dssp             TEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT
T ss_pred             CcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC
Confidence            3  3778888877765554443 3 8999999887 4555543                           2467788887


Q ss_pred             CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC---------C
Q psy2671         369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD---------F  439 (573)
Q Consensus       369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------g  439 (573)
                      ++.....+.. . .+..++++                                     |+| +++++..+         .
T Consensus       161 ~~~~~~~l~~-~-~~~~~~~s-------------------------------------pdg-~~~~~~~~~~~~~~~~~~  200 (347)
T 2gop_A          161 SEEVIEEFEK-P-RFSSGIWH-------------------------------------RDK-IVVNVPHREIIPQYFKFW  200 (347)
T ss_dssp             TTEEEEEEEE-E-TTCEEEEE-------------------------------------TTE-EEEEEECCCSSCCSSCCE
T ss_pred             CCeEEeeecC-C-CcccccCC-------------------------------------CCe-EEEEEecccccccccccc
Confidence            7765333322 1 34444444                                     445 44444433         1


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC--------CcEEEEeCCCCeEEEeecCCcceEEE-EEE
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD--------KSIKLWDGRIGKFITTLRGHVQAVYM-VAW  510 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d--------g~i~lwd~~~~~~~~~~~~h~~~v~~-v~~  510 (573)
                      .|.++|  ++ . ...+..+ ..+..+  +|||+.|+.++.+        ..|.+||  +++......+|...+.. +.|
T Consensus       201 ~l~~~d--~~-~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~  271 (347)
T 2gop_A          201 DIYIWE--DG-K-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIK  271 (347)
T ss_dssp             EEEEEE--TT-E-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEE
T ss_pred             cEEEeC--CC-c-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEE
Confidence            344445  22 2 2333333 445444  9999998877754        3688888  66655555666777886 899


Q ss_pred             CCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE-EEcc
Q psy2671         511 SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL-RLWQ  572 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i-~iw~  572 (573)
                      + |+ ++++++.++.++|| +.+++... +..+...|.+++|+|  +.+++++.++.. .+|.
T Consensus       272 s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~  328 (347)
T 2gop_A          272 D-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFT  328 (347)
T ss_dssp             T-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred             c-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence            9 98 99999999999999 87555433 334567899999999  677777777654 6663

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.67  E-value=5.2e-13  Score=137.89  Aligned_cols=314  Identities=12%  Similarity=0.044  Sum_probs=204.0

Q ss_pred             CCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC--CCceecccccCCccc
Q psy2671         217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS--TGKQIGQPMRGHKQW  294 (573)
Q Consensus       217 p~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~--~~~~~~~~~~~h~~~  294 (573)
                      |.+..+++...+++|.++|..+++.+.++.... .+..++|+|||+++++++.|+.|.+||+.  +++.+.....+.  .
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~  241 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--E  241 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--E
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--C
Confidence            455667788889999999999998887765432 46789999999999999999999999995  665543322222  2


Q ss_pred             EEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeEEEEecCC-----------CccEEEEEECCCc--EEEEEeCCC
Q psy2671         295 ITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQCVRVLTSH-----------TRSVTCIRWGGSG--LIYSASQDR  360 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~h-----------~~~v~~~~~~~~~--~l~s~s~d~  360 (573)
                      ...+.++++.. +++++++++ ..++++.++|..+.+.++.+...           ...+..+..++++  .++....+|
T Consensus       242 P~~ia~s~~~~-pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g  320 (567)
T 1qks_A          242 ARSIETSKMEG-WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG  320 (567)
T ss_dssp             EEEEEECCSTT-CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred             CceeEEccccC-CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence            35666652110 266666554 55699999999998887765422           1256677766553  455666778


Q ss_pred             eEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CC
Q psy2671         361 TIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DD  438 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~d  438 (573)
                      .|.++|..+........ ........                                     ..+.|++++++++. .+
T Consensus       321 ~v~~vd~~~~~~~~v~~i~~~~~~~d-------------------------------------~~~~pdgr~~~va~~~s  363 (567)
T 1qks_A          321 KILLVDYTDLNNLKTTEISAERFLHD-------------------------------------GGLDGSHRYFITAANAR  363 (567)
T ss_dssp             EEEEEETTCSSEEEEEEEECCSSEEE-------------------------------------EEECTTSCEEEEEEGGG
T ss_pred             eEEEEecCCCccceeeeeeccccccC-------------------------------------ceECCCCCEEEEEeCCC
Confidence            88888876542211000 00001111                                     12346788776554 67


Q ss_pred             CeEEEEcCCCCccceeeec----cccccEEEEEECCCC-CEEEEee-CCCcEEEEeCCC-------CeEEEeecCCcceE
Q psy2671         439 FTLFLWNPEKEKKSLARMT----GHQQLINCVEFSPDG-RIIASAS-FDKSIKLWDGRI-------GKFITTLRGHVQAV  505 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~----~h~~~v~~v~~sp~g-~~las~s-~dg~i~lwd~~~-------~~~~~~~~~h~~~v  505 (573)
                      ++|.++|+.+.+.......    .|......+ ++|++ .+.+++. .+++|.++|..+       .+.++++......-
T Consensus       364 n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~  442 (567)
T 1qks_A          364 NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGS  442 (567)
T ss_dssp             TEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred             CeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCC
Confidence            8999999987653222112    243222122 58874 4455553 468999999887       66777777553343


Q ss_pred             EEEEECCCCCEEEEEeC-------CCcEEEEeCCcc-----ccc-ccc--------cCcCCCEEEEEEccCCCEEEEee-
Q psy2671         506 YMVAWSSDSRLLVSGSA-------DSTLKVWNMKTK-----KIE-QDL--------PGHGDEVYAVDWAPDGEKVASGG-  563 (573)
Q Consensus       506 ~~v~~s~dg~~las~s~-------D~~v~vwd~~~~-----~~~-~~l--------~~h~~~v~~~~~s~d~~~l~s~~-  563 (573)
                      ..+..+|++++|.+...       .++|.++|+.+.     ... ..+        ..-...+..+.|+|+|+++..+. 
T Consensus       443 ~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~  522 (567)
T 1qks_A          443 LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVW  522 (567)
T ss_dssp             CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEE
T ss_pred             EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEee
Confidence            45778999999988663       358999999876     211 222        12245789999999999876552 


Q ss_pred             ----CCCcEEEcc
Q psy2671         564 ----KDKVLRLWQ  572 (573)
Q Consensus       564 ----~d~~i~iw~  572 (573)
                          .++.|.+++
T Consensus       523 ~~~~~~~~i~v~D  535 (567)
T 1qks_A          523 NGKDQESALVVVD  535 (567)
T ss_dssp             CCTTSCCEEEEEE
T ss_pred             cCCCCCCcEEEEE
Confidence                267777765

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.66  E-value=3.9e-14  Score=152.55  Aligned_cols=246  Identities=13%  Similarity=0.133  Sum_probs=162.2

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCC-----eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe-------
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDT-----TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV-------  272 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~-----~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~-------  272 (573)
                      +|...+.+++|||||++||.++.++     +|++||+.+++.+.....+. .+.+++|+|||+.|+.++.++.       
T Consensus       122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCcccccccc
Confidence            4656788999999999998776543     89999999988664322221 2567999999999999888766       


Q ss_pred             ---------EEEEECCCCcee---cccccCCcccEEEEEecccccCCCCCEEEEEeC-----CCcEEEEECCC------C
Q psy2671         273 ---------IHAWDSSTGKQI---GQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-----DGAIRIWDVIL------S  329 (573)
Q Consensus       273 ---------i~vwd~~~~~~~---~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-----dg~v~iwd~~~------~  329 (573)
                               |++|++.++...   ......|...+..+.|+|     ++++++..+.     +..|++||+..      +
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-----Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~  275 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-----DGRYVLLSIREGCDPVNRLWYCDLQQESNGITG  275 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-----TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred             ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-----CCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence                     999999877521   111223455677777765     6777776654     56788898865      3


Q ss_pred             e-EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCC
Q psy2671         330 Q-CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDP  408 (573)
Q Consensus       330 ~-~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~  408 (573)
                      . ....+..+...+... |++                                                           
T Consensus       276 ~~~~~~l~~~~~~~~~~-~s~-----------------------------------------------------------  295 (710)
T 2xdw_A          276 ILKWVKLIDNFEGEYDY-VTN-----------------------------------------------------------  295 (710)
T ss_dssp             SCCCEEEECSSSSCEEE-EEE-----------------------------------------------------------
T ss_pred             ccceEEeeCCCCcEEEE-Eec-----------------------------------------------------------
Confidence            2 233333333322221 211                                                           


Q ss_pred             CCchhhhhhhhhheeeeCCCCcEEEEEeC----CCeEEEEcCCCCcc-ceeeeccccc--cEEEEEECCCCCEEEEeeCC
Q psy2671         409 ANPEESSKHALAKYQAQCPEGEKLVSGSD----DFTLFLWNPEKEKK-SLARMTGHQQ--LINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~l~sg~~----dg~i~lwd~~~~~~-~~~~~~~h~~--~v~~v~~sp~g~~las~s~d  481 (573)
                                         +|..|+..+.    .+.|.+||+.+... ....+..|..  .+..++|++++.++++...|
T Consensus       296 -------------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~  356 (710)
T 2xdw_A          296 -------------------EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD  356 (710)
T ss_dssp             -------------------ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred             -------------------cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence                               1222222221    23466666554321 1233334433  57788999888889999888


Q ss_pred             Cc--EEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEE-e---CCCcEEEEeCCccc
Q psy2671         482 KS--IKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSG-S---ADSTLKVWNMKTKK  535 (573)
Q Consensus       482 g~--i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~-s---~D~~v~vwd~~~~~  535 (573)
                      +.  |.+||..+++.+..+..+...+..++++|+++.++.. +   ..++|++||+.+++
T Consensus       357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            85  5667877788778888787788999999999766533 2   34689999998776

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.65  E-value=1.3e-14  Score=155.84  Aligned_cols=208  Identities=14%  Similarity=0.086  Sum_probs=142.0

Q ss_pred             CCccccEEEEEEcCCCCeeE-----EeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         107 PGHAEAVISVKFSPNGRSLA-----SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~la-----t~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      .+|...+.+++|||||++||     +|+.+.+|++||+.+++.+..                                  
T Consensus       117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------------------------------  162 (695)
T 2bkl_A          117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------------------------------  162 (695)
T ss_dssp             SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------------------------------
T ss_pred             cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------------------------------
Confidence            46777899999999999999     666678999999998754200                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCe-------------EEEEECCCCe----eeEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT-------------VRFWDVTTQT----PLFK  244 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~-------------i~iwd~~~~~----~~~~  244 (573)
                                         ..+.+..  ...++|+|||+.|+.++.|..             |++|++.++.    .++.
T Consensus       163 -------------------~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~  221 (695)
T 2bkl_A          163 -------------------DVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHE  221 (695)
T ss_dssp             -------------------CCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEEC
T ss_pred             -------------------cccCccc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEe
Confidence                               0001111  146789999999999998876             9999998765    4444


Q ss_pred             ecCCCCcEEEEEEcCCCCeEEEEeeCC----eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe---C
Q psy2671         245 CEGHKHWVLCIAWSPDSKQLVSGCKNG----VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG---K  317 (573)
Q Consensus       245 ~~~h~~~V~~v~~s~dg~~l~sgs~dg----~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~---~  317 (573)
                      ...|...+.+++|||||++|+.++.++    .|.+|+..++..  ..+..+...+....| +     +++.++.+.   .
T Consensus       222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~~~~~~~~-~-----~g~l~~~s~~~~~  293 (695)
T 2bkl_A          222 RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF--RLLVKGVGAKYEVHA-W-----KDRFYVLTDEGAP  293 (695)
T ss_dssp             CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC--EEEEECSSCCEEEEE-E-----TTEEEEEECTTCT
T ss_pred             cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce--EEeecCCCceEEEEe-c-----CCcEEEEECCCCC
Confidence            455667899999999999998888776    677776655432  222333333333333 1     344444443   2


Q ss_pred             CCcEEEEECCCCeE---EEEecCC-CccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEecc
Q psy2671         318 DGAIRIWDVILSQC---VRVLTSH-TRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLE  377 (573)
Q Consensus       318 dg~v~iwd~~~~~~---~~~~~~h-~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~  377 (573)
                      ++.|.+||+.++..   ...+..+ ...+..+.+.++..+++...|+..++|... ++.....+.
T Consensus       294 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~  358 (695)
T 2bkl_A          294 RQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQ  358 (695)
T ss_dssp             TCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEECC
T ss_pred             CCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEec
Confidence            57899999877642   3334433 456788888866688889999999888654 344444443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.63  E-value=5.5e-14  Score=151.45  Aligned_cols=286  Identities=9%  Similarity=0.050  Sum_probs=166.6

Q ss_pred             CCCCeEEEEeCCC-----eEEEEECCCCeeeEEe------cCCCCcEEEEEEcCCCCeEEEEeeCC-----eEEEEECCC
Q psy2671         217 PNGRSLASGSGDT-----TVRFWDVTTQTPLFKC------EGHKHWVLCIAWSPDSKQLVSGCKNG-----VIHAWDSST  280 (573)
Q Consensus       217 p~g~~las~s~d~-----~i~iwd~~~~~~~~~~------~~h~~~V~~v~~s~dg~~l~sgs~dg-----~i~vwd~~~  280 (573)
                      |+|++++....++     .+.+.+..++.....+      .+|...+.+++|||||++||.++.++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            8888876554321     3333343333322111      24545688999999999998776543     899999999


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      ++........  ..+..++|.|     +++.|+.++.++.       ...    ..+.              .-......
T Consensus       161 g~~~~~~~~~--~~~~~~~wsp-----Dg~~l~~~~~~~~-------~~~----~~~~--------------~~~~~~~~  208 (710)
T 2xdw_A          161 AKELPDVLER--VKFSCMAWTH-----DGKGMFYNAYPQQ-------DGK----SDGT--------------ETSTNLHQ  208 (710)
T ss_dssp             TEEEEEEEEE--ECSCCEEECT-----TSSEEEEEECCCC-------SSC----CSSS--------------CCCCCCCC
T ss_pred             CCCCcccccC--cccceEEEEe-----CCCEEEEEEECCc-------ccc----cccc--------------ccccCCCC
Confidence            8765322211  1244566765     6778888776654       000    0000              00001123


Q ss_pred             eEEEEeCCCCee----eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe
Q psy2671         361 TIKVWRASDGVM----CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS  436 (573)
Q Consensus       361 ~i~vw~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~  436 (573)
                      .|.+|++.++..    +.....|..++..+.+                                     +|+|++|+..+
T Consensus       209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~-------------------------------------SpDg~~l~~~~  251 (710)
T 2xdw_A          209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL-------------------------------------SDDGRYVLLSI  251 (710)
T ss_dssp             EEEEEETTSCGGGCEEEECCTTCTTCEEEEEE-------------------------------------CTTSCEEEEEE
T ss_pred             EEEEEECCCCcccceEEeccCCCCeEEEEEEE-------------------------------------cCCCCEEEEEE
Confidence            344455443321    1111112222222222                                     24455555444


Q ss_pred             C-----CCeEEEEcCCC------CccceeeeccccccEEEEEECCCCCEEEEeeCC----CcEEEEeCCCCe--EEEeec
Q psy2671         437 D-----DFTLFLWNPEK------EKKSLARMTGHQQLINCVEFSPDGRIIASASFD----KSIKLWDGRIGK--FITTLR  499 (573)
Q Consensus       437 ~-----dg~i~lwd~~~------~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d----g~i~lwd~~~~~--~~~~~~  499 (573)
                      .     +..+++||+.+      +......+..+...+.. .|+|+|+.|+..+..    +.|.+||+.++.  ....+.
T Consensus       252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~  330 (710)
T 2xdw_A          252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV  330 (710)
T ss_dssp             ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred             EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence            3     45677777654      32234445555555544 488999887766543    369999988764  234444


Q ss_pred             CCcc--eEEEEEECCCCCEEEEEeCCCc--EEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEe-e---CCCcEEEc
Q psy2671         500 GHVQ--AVYMVAWSSDSRLLVSGSADST--LKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG-G---KDKVLRLW  571 (573)
Q Consensus       500 ~h~~--~v~~v~~s~dg~~las~s~D~~--v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~-~---~d~~i~iw  571 (573)
                      .|..  .+..++|++++.++++...|+.  |++|++.+++....+..+.+.+..+.++|+++.|+.. +   ..++|++|
T Consensus       331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~  410 (710)
T 2xdw_A          331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC  410 (710)
T ss_dssp             CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred             CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence            4433  6888999988888888888885  5666776777667777777789999999999876633 2   33677777


Q ss_pred             c
Q psy2671         572 Q  572 (573)
Q Consensus       572 ~  572 (573)
                      +
T Consensus       411 d  411 (710)
T 2xdw_A          411 D  411 (710)
T ss_dssp             E
T ss_pred             E
Confidence            5

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.63  E-value=3.2e-14  Score=152.81  Aligned_cols=274  Identities=14%  Similarity=0.049  Sum_probs=172.3

Q ss_pred             cCCCCeEEEEeCCC---eEEEEE--CCCCeeeEEe------cCCCCcEEEEEEcCCCCeEE-----EEeeCCeEEEEECC
Q psy2671         216 SPNGRSLASGSGDT---TVRFWD--VTTQTPLFKC------EGHKHWVLCIAWSPDSKQLV-----SGCKNGVIHAWDSS  279 (573)
Q Consensus       216 sp~g~~las~s~d~---~i~iwd--~~~~~~~~~~------~~h~~~V~~v~~s~dg~~l~-----sgs~dg~i~vwd~~  279 (573)
                      +|+|++++....++   .-.||.  ...+.....+      .+|...+.+++|||||++||     .|+.+..|++||+.
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            47888887766543   344554  3344322222      25666789999999999998     34445689999999


Q ss_pred             CCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeCCCc-------------EEEEECCCCe----EEEEecCCCcc
Q psy2671         280 TGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA-------------IRIWDVILSQ----CVRVLTSHTRS  341 (573)
Q Consensus       280 ~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~-------------v~iwd~~~~~----~~~~~~~h~~~  341 (573)
                      +|+.+ ...+....  ...++|.|     +++.|+.++.|..             |++|++.++.    .+.....|...
T Consensus       156 tg~~~~~~~~~~~~--~~~~~wsp-----Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~  228 (695)
T 2bkl_A          156 SGEWSKVDVIEGGK--YATPKWTP-----DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT  228 (695)
T ss_dssp             TCCBCSSCCBSCCT--TCCCEECT-----TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC
T ss_pred             CCCCcCCcccCccc--ccceEEec-----CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEE
Confidence            98754 21122111  14566665     7788998888776             9999998765    23333345567


Q ss_pred             EEEEEECCCc-EEEEEeCCC----eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         342 VTCIRWGGSG-LIYSASQDR----TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       342 v~~~~~~~~~-~l~s~s~d~----~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      +..+.|+++| .|+.++.++    .|.+|+..++... .+..+...+....                             
T Consensus       229 ~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~-----------------------------  278 (695)
T 2bkl_A          229 FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFR-LLVKGVGAKYEVH-----------------------------  278 (695)
T ss_dssp             EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCE-EEEECSSCCEEEE-----------------------------
T ss_pred             EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceE-EeecCCCceEEEE-----------------------------
Confidence            8899999988 455555444    5666655444322 2222211111111                             


Q ss_pred             hhhhheeeeCCCCcEEEEEe---CCCeEEEEcCCCCcc-ceeeeccc--cccEEEEEECCCCCEEEEeeCCCcEEEEeCC
Q psy2671         417 HALAKYQAQCPEGEKLVSGS---DDFTLFLWNPEKEKK-SLARMTGH--QQLINCVEFSPDGRIIASASFDKSIKLWDGR  490 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~---~dg~i~lwd~~~~~~-~~~~~~~h--~~~v~~v~~sp~g~~las~s~dg~i~lwd~~  490 (573)
                               .++|..++...   .++.|.+||+.+... ....+..+  ...+..++++ ++.++++...|+..+||...
T Consensus       279 ---------~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~  348 (695)
T 2bkl_A          279 ---------AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT  348 (695)
T ss_dssp             ---------EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred             ---------ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence                     12344333333   257899999876532 12333333  3457888888 77889999999998888544


Q ss_pred             -CCeEEEeecCC-cceEEEEEECCCCCEEEE----EeCCCcEEEEeCCcccc
Q psy2671         491 -IGKFITTLRGH-VQAVYMVAWSSDSRLLVS----GSADSTLKVWNMKTKKI  536 (573)
Q Consensus       491 -~~~~~~~~~~h-~~~v~~v~~s~dg~~las----~s~D~~v~vwd~~~~~~  536 (573)
                       .++....+..+ ...+..++++||++.++.    ....++|++||+.+++.
T Consensus       349 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~  400 (695)
T 2bkl_A          349 LKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS  400 (695)
T ss_dssp             TTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred             CCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence             35556666655 567888899999987762    23457899999987653

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.60  E-value=2.3e-11  Score=115.91  Aligned_cols=278  Identities=9%  Similarity=0.002  Sum_probs=182.9

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee-EEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK  282 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~-~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~  282 (573)
                      +.....+.++++.++|+..++...++.|.+||.. ++.. .....+...+.++++.++|...++...++.|..||.. ++
T Consensus        16 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~   93 (300)
T 2qc5_A           16 SIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG   93 (300)
T ss_dssp             SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence            3445678999999999987877778999999987 4432 2233344678999999999877766668899999987 55


Q ss_pred             eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE-ecCCCccEEEEEECCCcEEEEEeC-CC
Q psy2671         283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYSASQ-DR  360 (573)
Q Consensus       283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~l~s~s~-d~  360 (573)
                      ............+.++.+.+     +++.+++...++.|..+|.. ++.... +......+.++++.+++.++.+.. ++
T Consensus        94 ~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~  167 (300)
T 2qc5_A           94 FTEYPLPQPDSGPYGITEGL-----NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNN  167 (300)
T ss_dssp             EEEEECSSTTCCEEEEEECS-----TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT
T ss_pred             eEEecCCCCCCCCccceECC-----CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCC
Confidence            43222222335567777653     56677776667889999987 544322 333456788899988776666554 67


Q ss_pred             eEEEEeCCCCeeeEe-ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         361 TIKVWRASDGVMCRT-LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      .|..++. ++..... ...+...+..+++                                     .+++...++....+
T Consensus       168 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~-------------------------------------d~~g~l~v~~~~~~  209 (300)
T 2qc5_A          168 SIGRITN-TGKLEEYPLPTNAAAPVGITS-------------------------------------GNDGALWFVEIMGN  209 (300)
T ss_dssp             EEEEECT-TCCEEEEECSSTTCCEEEEEE-------------------------------------CTTSSEEEEETTTT
T ss_pred             eEEEECC-CCcEEEeeCCCCCCCcceEEE-------------------------------------CCCCCEEEEccCCC
Confidence            8988887 4433221 1111112222222                                     24566666666677


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE-EeecCCcceEEEEEECCCCCEEE
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~-~~~~~h~~~v~~v~~s~dg~~la  518 (573)
                      .|..|+.. +.........+...+.+++++++|++.++...++.|..||. +++.. ..+......+.++++.++|++.+
T Consensus       210 ~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v  287 (300)
T 2qc5_A          210 KIGRITTT-GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWF  287 (300)
T ss_dssp             EEEEECTT-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEE
T ss_pred             EEEEEcCC-CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEE
Confidence            89999973 22222222334456889999999998777767789999998 45433 22333345678899999998766


Q ss_pred             EEeCCCcEEEEeC
Q psy2671         519 SGSADSTLKVWNM  531 (573)
Q Consensus       519 s~s~D~~v~vwd~  531 (573)
                      +.. . .|..+|.
T Consensus       288 ~~~-~-~i~~~~p  298 (300)
T 2qc5_A          288 ALK-C-KIGKLNL  298 (300)
T ss_dssp             ECS-S-EEEEEEE
T ss_pred             Ecc-C-ceEEeCC
Confidence            554 4 6666665

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.59  E-value=1.7e-12  Score=125.68  Aligned_cols=264  Identities=10%  Similarity=0.013  Sum_probs=173.8

Q ss_pred             CCCeEEEEECCCCeeeEEec------CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEe
Q psy2671         227 GDTTVRFWDVTTQTPLFKCE------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW  300 (573)
Q Consensus       227 ~d~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~  300 (573)
                      .+++|.++|..+++....+.      ........+++. +++..++...++.|.+||..+++.+... . .......+++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i-~-~~~~p~~i~~   91 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI-T-GFTSPRYIHF   91 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE-E-CCSSEEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc-C-CCCCCcEEEE
Confidence            38899999999887654321      122346778774 3444555566799999999998875443 2 2244566666


Q ss_pred             cccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-----ccEEEEEECCCcEEEEEe--CCCeEEEEeCCCCeee
Q psy2671         301 EPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-----RSVTCIRWGGSGLIYSAS--QDRTIKVWRASDGVMC  373 (573)
Q Consensus       301 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~s--~d~~i~vw~~~~~~~~  373 (573)
                      .+     +++.+++...++.|.+||..+++....+....     .....+++ .++.++.+.  .+++|.++|..++...
T Consensus        92 ~~-----~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~  165 (328)
T 3dsm_A           92 LS-----DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVV  165 (328)
T ss_dssp             EE-----TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred             eC-----CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEE
Confidence            44     44555555589999999999988776655322     13445666 455666666  4899999999988766


Q ss_pred             EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----------CeEEE
Q psy2671         374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----------FTLFL  443 (573)
Q Consensus       374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----------g~i~l  443 (573)
                      ..+..... ...+                                     ...|+|++++++..+          +.|.+
T Consensus       166 ~~i~~g~~-p~~i-------------------------------------~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~  207 (328)
T 3dsm_A          166 DELTIGIQ-PTSL-------------------------------------VMDKYNKMWTITDGGYEGSPYGYEAPSLYR  207 (328)
T ss_dssp             EEEECSSC-BCCC-------------------------------------EECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred             EEEEcCCC-ccce-------------------------------------EEcCCCCEEEEECCCccCCccccCCceEEE
Confidence            55432110 0111                                     123566666666554          78999


Q ss_pred             EcCCCCccceeeec-cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe--ecCCcceEEEEEECC-CCCEEEE
Q psy2671         444 WNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT--LRGHVQAVYMVAWSS-DSRLLVS  519 (573)
Q Consensus       444 wd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~-dg~~las  519 (573)
                      +|..+.+. ...+. ........++|+|+++.|.++..  .|.+||..+++....  +..+......++++| ++.+.++
T Consensus       208 id~~t~~v-~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva  284 (328)
T 3dsm_A          208 IDAETFTV-EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA  284 (328)
T ss_dssp             EETTTTEE-EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred             EECCCCeE-EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence            99876543 22222 11235789999999998887754  899999988775321  222235678999999 4555555


Q ss_pred             E----eCCCcEEEEeCCccccccccc
Q psy2671         520 G----SADSTLKVWNMKTKKIEQDLP  541 (573)
Q Consensus       520 ~----s~D~~v~vwd~~~~~~~~~l~  541 (573)
                      .    ..++.|.+||.. ++.+..+.
T Consensus       285 ~~~~y~~~~~V~v~d~~-g~~~~~i~  309 (328)
T 3dsm_A          285 DAIDYQQQGIVYRYSPQ-GKLIDEFY  309 (328)
T ss_dssp             ECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred             cccccccCCEEEEECCC-CCEEEEEE
Confidence            5    568899999998 77666554

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.58  E-value=1.7e-12  Score=125.61  Aligned_cols=255  Identities=10%  Similarity=0.015  Sum_probs=172.9

Q ss_pred             eCCeEEEEECCCCceeccccc-----CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMR-----GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      .++.|.++|.++++.......     ........+.+.      .++.+++...++.|.+||..+++.+..+.. .....
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~------~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~   87 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR------DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPR   87 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE------TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE------CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCc
Confidence            378999999998875432211     111234445432      245667777789999999999988887753 45678


Q ss_pred             EEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCc-----ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         344 CIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHA-----HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       344 ~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      .+++++++.++.+. .++.|.+||..++.....+....     .....+++                             
T Consensus        88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-----------------------------  138 (328)
T 3dsm_A           88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-----------------------------  138 (328)
T ss_dssp             EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-----------------------------
T ss_pred             EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-----------------------------
Confidence            88887677777777 89999999999887665443211     01111111                             


Q ss_pred             hhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC----------CcEEE
Q psy2671         418 ALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD----------KSIKL  486 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d----------g~i~l  486 (573)
                               .++..+++.. .+++|.+||+.+.+. ...+.. ......++++|+|++++++..+          +.|.+
T Consensus       139 ---------~~~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~  207 (328)
T 3dsm_A          139 ---------YGKYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR  207 (328)
T ss_dssp             ---------ETTEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred             ---------ECCEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence                     1233444444 488999999987643 222322 2234678999999988877654          78999


Q ss_pred             EeCCCCeEEEeecCC-cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc--cccCcCCCEEEEEEccC-CCEEEEe
Q psy2671         487 WDGRIGKFITTLRGH-VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ--DLPGHGDEVYAVDWAPD-GEKVASG  562 (573)
Q Consensus       487 wd~~~~~~~~~~~~h-~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~--~l~~h~~~v~~~~~s~d-~~~l~s~  562 (573)
                      +|..+++....+... ......++|+||+++|+++..  .|.+||..+++...  .+..+......++++|+ ++..++.
T Consensus       208 id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~  285 (328)
T 3dsm_A          208 IDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD  285 (328)
T ss_dssp             EETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred             EECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence            999999877666432 235788999999999888765  89999998887642  12222457889999995 5555555


Q ss_pred             ----eCCCcEEEcc
Q psy2671         563 ----GKDKVLRLWQ  572 (573)
Q Consensus       563 ----~~d~~i~iw~  572 (573)
                          ..++.|.+|+
T Consensus       286 ~~~y~~~~~V~v~d  299 (328)
T 3dsm_A          286 AIDYQQQGIVYRYS  299 (328)
T ss_dssp             CTTSSSEEEEEEEC
T ss_pred             ccccccCCEEEEEC
Confidence                5678899886

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.58  E-value=8.9e-13  Score=125.81  Aligned_cols=229  Identities=12%  Similarity=0.102  Sum_probs=158.2

Q ss_pred             CcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCC
Q psy2671         291 HKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRAS  368 (573)
Q Consensus       291 h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~  368 (573)
                      +.....++.|.|     +++ .++++..++.|..|+...+  ...+..+...+.++++++++.++.+.. ++.|.+|+..
T Consensus        26 ~~~~~eg~~~d~-----~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~   98 (296)
T 3e5z_A           26 GFTWTEGPVYVP-----ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP   98 (296)
T ss_dssp             CCSSEEEEEEEG-----GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred             CCccccCCeEeC-----CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence            344566777776     445 6778888999999999877  556666777899999998886666654 6899999987


Q ss_pred             CCeeeEeccCCc----ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE----e----
Q psy2671         369 DGVMCRTLEGHA----HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG----S----  436 (573)
Q Consensus       369 ~~~~~~~~~~~~----~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg----~----  436 (573)
                      ++..........    ..++.++                                     ..|+|.++++.    .    
T Consensus        99 ~g~~~~~~~~~~~~~~~~~~~i~-------------------------------------~d~~G~l~vtd~~~g~~~~~  141 (296)
T 3e5z_A           99 GGEWESIADSFEGKKLNSPNDVC-------------------------------------LAPDGSLWFSDPTYGIDKPE  141 (296)
T ss_dssp             TCCEEEEECEETTEECCCCCCEE-------------------------------------ECTTSCEEEEECSHHHHCGG
T ss_pred             CCcEEEEeeccCCCCCCCCCCEE-------------------------------------ECCCCCEEEECCcccccccc
Confidence            776432221100    0111222                                     23556666652    2    


Q ss_pred             ---------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-CCeE---EEeecCCcc
Q psy2671         437 ---------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR-IGKF---ITTLRGHVQ  503 (573)
Q Consensus       437 ---------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-~~~~---~~~~~~h~~  503 (573)
                               ..+.|..++.. +  ....+..+....+.++|+|+|+.+++.+.++.|.+||.. .++.   ...+..+..
T Consensus       142 ~~~~~~~~~~~~~l~~~~~~-g--~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~  218 (296)
T 3e5z_A          142 EGYGGEMELPGRWVFRLAPD-G--TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG  218 (296)
T ss_dssp             GSSCCCCCSSSCEEEEECTT-S--CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS
T ss_pred             ccccccccCCCcEEEEECCC-C--CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC
Confidence                     13456666654 2  233344555667899999999999777888999999986 4544   233333444


Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEE-ccCCCEEEEeeCCCcEEE
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW-APDGEKVASGGKDKVLRL  570 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~-s~d~~~l~s~~~d~~i~i  570 (573)
                      .+..++++++|++.++.  ++.|.+|+.. ++.+..+..+.. +.+++| +|+++.|..++.++..++
T Consensus       219 ~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~  282 (296)
T 3e5z_A          219 KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI  282 (296)
T ss_dssp             CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred             CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence            56678999999877666  7889999986 666666666666 889999 589999999888865543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.57  E-value=1.4e-12  Score=122.55  Aligned_cols=242  Identities=8%  Similarity=-0.031  Sum_probs=149.2

Q ss_pred             cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      ...+++++|+|+..+ +.+.++.|.+||..+.........+...+.+++++++|+.+++.. ++.|.+||........ .
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~-~  102 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV-L  102 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE-C
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee-e
Confidence            678999999998766 447789999999766543322223334678899999998555555 8899999987654321 1


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA  367 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~  367 (573)
                      .......+.++.+.+     +++.+++...++.|.+|+................+.++++.+                  
T Consensus       103 ~~~~~~~p~~i~~~~-----~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~------------------  159 (270)
T 1rwi_B          103 PFDGLNYPEGLAVDT-----QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN------------------  159 (270)
T ss_dssp             CCCSCSSEEEEEECT-----TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT------------------
T ss_pred             ecCCcCCCcceEECC-----CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC------------------
Confidence            112224566666654     455666656667777775433222111111111223333333                  


Q ss_pred             CCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCC
Q psy2671         368 SDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE  447 (573)
Q Consensus       368 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~  447 (573)
                                                                                  +|.++++...++.|.+|+..
T Consensus       160 ------------------------------------------------------------~g~l~v~~~~~~~i~~~~~~  179 (270)
T 1rwi_B          160 ------------------------------------------------------------SGNVYVTDTDNNRVVKLEAE  179 (270)
T ss_dssp             ------------------------------------------------------------TCCEEEEEGGGTEEEEECTT
T ss_pred             ------------------------------------------------------------CCCEEEEECCCCEEEEEecC
Confidence                                                                        34444444444555666554


Q ss_pred             CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEE
Q psy2671         448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK  527 (573)
Q Consensus       448 ~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~  527 (573)
                      ...... ....+...+.+++++++|.++++...++.|.+||............+...+..++++++|+++++...++.|+
T Consensus       180 ~~~~~~-~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~  258 (270)
T 1rwi_B          180 SNNQVV-LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  258 (270)
T ss_dssp             TCCEEE-CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred             CCceEe-ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEE
Confidence            332111 1112224578899999998888887889999999876543333333445688999999999888888999999


Q ss_pred             EEeCCcccc
Q psy2671         528 VWNMKTKKI  536 (573)
Q Consensus       528 vwd~~~~~~  536 (573)
                      +|++...+.
T Consensus       259 ~~~~~~~~~  267 (270)
T 1rwi_B          259 KLTSLEHHH  267 (270)
T ss_dssp             EECCCGGGS
T ss_pred             EEcCCCccc
Confidence            999876543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.57  E-value=1.4e-12  Score=124.47  Aligned_cols=242  Identities=13%  Similarity=0.109  Sum_probs=159.5

Q ss_pred             EEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         243 FKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                      ..+..+.....+++|+|+|+ .++++..++.|..|+..++ .  ..+..+...+.++++.|     +++.+++...++.|
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--~~~~~~~~~~~~l~~~~-----dg~l~v~~~~~~~i   92 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--SPEMHPSHHQNGHCLNK-----QGHLIACSHGLRRL   92 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--EEEESSCSSEEEEEECT-----TCCEEEEETTTTEE
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--EEEECCCCCcceeeECC-----CCcEEEEecCCCeE
Confidence            33444556678999999998 6778888999999999877 2  23344556678888765     56777776667899


Q ss_pred             EEEECCCCeEEEEecCC----CccEEEEEECCCcEEEEE-----eC-------------CCeEEEEeCCCCeeeEeccCC
Q psy2671         322 RIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYSA-----SQ-------------DRTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       322 ~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s~-----s~-------------d~~i~vw~~~~~~~~~~~~~~  379 (573)
                      .+||..+++........    ...+..+++.++|.++.+     +.             .+.|..++.. +.. ..+..+
T Consensus        93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~  170 (296)
T 3e5z_A           93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD  170 (296)
T ss_dssp             EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC
T ss_pred             EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC
Confidence            99999777654433221    123567888888865553     21             2344444433 322 222222


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc---eeee
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS---LARM  456 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~---~~~~  456 (573)
                      ....+.+++                                     .|+++.+++.+.++.|++|++......   ...+
T Consensus       171 ~~~~~gi~~-------------------------------------s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~  213 (296)
T 3e5z_A          171 RVKPNGLAF-------------------------------------LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF  213 (296)
T ss_dssp             CSSEEEEEE-------------------------------------CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE
T ss_pred             CCCCccEEE-------------------------------------CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe
Confidence            222233333                                     366777777778899999998622221   1122


Q ss_pred             ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE-CCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW-SSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       457 ~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~-s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      ..+...+.+++++++|+++++.  ++.|.+||.. ++.+..+..+.. +.+++| +|+++.|++++.++ +.-++.++.+
T Consensus       214 ~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~  288 (296)
T 3e5z_A          214 TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG  288 (296)
T ss_dssp             CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred             eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence            2234456789999999977766  7899999986 777777777766 889999 68999998888764 4444555544


Q ss_pred             c
Q psy2671         536 I  536 (573)
Q Consensus       536 ~  536 (573)
                      +
T Consensus       289 ~  289 (296)
T 3e5z_A          289 L  289 (296)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.57  E-value=5.4e-11  Score=113.35  Aligned_cols=274  Identities=12%  Similarity=0.044  Sum_probs=179.3

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC
Q psy2671         248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI  327 (573)
Q Consensus       248 h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~  327 (573)
                      ......+++++++|+..++...++.|.+||.. ++............+.++.+.+     +++.+++...++.|..||..
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-----~g~l~v~~~~~~~v~~~d~~   91 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-----LGDIWFTENGANKIGKLSKK   91 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-----TSCEEEEETTTTEEEEECTT
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-----CCCEEEEecCCCeEEEECCC
Confidence            34567899999999877776678999999987 5543222233335577777653     55667766667889999987


Q ss_pred             CCeEEE-EecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCCCCeeeE-eccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         328 LSQCVR-VLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRASDGVMCR-TLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       328 ~~~~~~-~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                       ++... .+......+.++++.+++.++.+.. ++.|..++.. +.... .+.........+++                
T Consensus        92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~----------------  153 (300)
T 2qc5_A           92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITL----------------  153 (300)
T ss_dssp             -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEE----------------
T ss_pred             -CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEE----------------
Confidence             54432 2233446688999988876666554 7889888876 44331 11111112222222                


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcE
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSI  484 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i  484 (573)
                                           .+++...++...++.|..++. ++.........+...+..++++++|++.++....+.|
T Consensus       154 ---------------------d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i  211 (300)
T 2qc5_A          154 ---------------------GSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKI  211 (300)
T ss_dssp             ---------------------CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred             ---------------------CCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEE
Confidence                                 255666666666788999987 3322222222334568899999999888877777889


Q ss_pred             EEEeCCCCeEEEe-ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-ccccCcCCCEEEEEEccCCCEEEEe
Q psy2671         485 KLWDGRIGKFITT-LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-QDLPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       485 ~lwd~~~~~~~~~-~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-~~l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      ..||. +++.... +..+...+.+++++++|++.++...++.|..|+.. ++.. ..+......+.++.+.++|+..++.
T Consensus       212 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~  289 (300)
T 2qc5_A          212 GRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFAL  289 (300)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEEC
T ss_pred             EEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEc
Confidence            99998 5544332 34445668899999999977777677899999984 4332 2234344568889999999866655


Q ss_pred             eCCCcEEEc
Q psy2671         563 GKDKVLRLW  571 (573)
Q Consensus       563 ~~d~~i~iw  571 (573)
                      . . .|..+
T Consensus       290 ~-~-~i~~~  296 (300)
T 2qc5_A          290 K-C-KIGKL  296 (300)
T ss_dssp             S-S-EEEEE
T ss_pred             c-C-ceEEe
Confidence            4 4 44443

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.56  E-value=2.2e-12  Score=121.11  Aligned_cols=236  Identities=8%  Similarity=0.014  Sum_probs=157.6

Q ss_pred             cEEEEEecccccCCCCCEEE-EEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCee
Q psy2671         294 WITALSWEPFHLNHQCRRFA-SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVM  372 (573)
Q Consensus       294 ~v~~~~~~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~  372 (573)
                      ...++++.+     +++.++ +.+.++.|..|+............+...+.++++.+++.++.+..++.|..|+......
T Consensus        25 ~p~~i~~~~-----~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~   99 (270)
T 1rwi_B           25 SPSGVAVDS-----AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ   99 (270)
T ss_dssp             CEEEEEECT-----TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred             CccceEECC-----CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE
Confidence            445666544     556666 44678899999876544332222333567788998887777776688999999765433


Q ss_pred             eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc
Q psy2671         373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS  452 (573)
Q Consensus       373 ~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~  452 (573)
                      .............+++                                     .++|..+++...++.|.+|+..+....
T Consensus       100 ~~~~~~~~~~p~~i~~-------------------------------------~~~g~l~v~~~~~~~i~~~~~~~~~~~  142 (270)
T 1rwi_B          100 TVLPFDGLNYPEGLAV-------------------------------------DTQGAVYVADRGNNRVVKLAAGSKTQT  142 (270)
T ss_dssp             EECCCCSCSSEEEEEE-------------------------------------CTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred             eeeecCCcCCCcceEE-------------------------------------CCCCCEEEEECCCCEEEEEECCCceeE
Confidence            2111111112222222                                     255677777777889999976543322


Q ss_pred             eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .. .......+.+++++|+|+++++...++.|.+||............+...+..++++++|.++++...++.|.+|+..
T Consensus       143 ~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~  221 (270)
T 1rwi_B          143 VL-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG  221 (270)
T ss_dssp             EC-CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred             ee-ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence            11 12222356789999999988887778999999988766544433444668899999999888877788999999997


Q ss_pred             cccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         533 TKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       533 ~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.........+...+.+++++++|+.+++...++.|++++
T Consensus       222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~  261 (270)
T 1rwi_B          222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  261 (270)
T ss_dssp             CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             CCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence            6554333333345789999999999888888999999885

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.56  E-value=6e-11  Score=116.45  Aligned_cols=283  Identities=12%  Similarity=0.007  Sum_probs=175.8

Q ss_pred             EEcCCCCeEEEEeC--CC---eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEEC
Q psy2671         214 KFSPNGRSLASGSG--DT---TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDS  278 (573)
Q Consensus       214 ~fsp~g~~las~s~--d~---~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~  278 (573)
                      ...|+++++..+..  ..   +|.++|..+++.+..+..-..+  .++|+|||++|+++.          .++.|.+||.
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~  104 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP  104 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence            34578877766653  22   8999999999887776543333  899999999998876          3678999999


Q ss_pred             CCCceecccccC-C-----cccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEE-ecCCCccEEEEEECC
Q psy2671         279 STGKQIGQPMRG-H-----KQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGG  349 (573)
Q Consensus       279 ~~~~~~~~~~~~-h-----~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~-~~~h~~~v~~~~~~~  349 (573)
                      .+.+.+.....+ .     ......+.++     ++++++..+..  ++.|.++| .+++.+.. +.... .+. +...+
T Consensus       105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~s-----pDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~~~-~~~~~  176 (373)
T 2mad_H          105 VTFLPIADIELPDAPRFDVGPYSWMNANT-----PNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-CYH-IHPGA  176 (373)
T ss_pred             CCCcEEEEEECCCccccccCCCccceEEC-----CCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-eEE-EEeCC
Confidence            877654322111 0     0112344444     47888887764  57899999 98887766 54321 121 11122


Q ss_pred             CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671         350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG  429 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (573)
                      ...+++.+.|+.+.+++. ++..........  +.   .......                          ......+.+
T Consensus       177 ~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~--~~---~~~~p~~--------------------------~~~~~~~~~  224 (373)
T 2mad_H          177 PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGA--ML---TAAQNLL--------------------------TQPAQANKS  224 (373)
T ss_pred             CceEEEEcCCCCEEEEEC-CCcEEEEEeccc--cc---cCCccee--------------------------ecceeEecC
Confidence            235667778999999998 765542211000  00   0000000                          000011222


Q ss_pred             cEEEEEeCCCeEEEEcCCCCccc-eeeecc----------ccccEEEEEECCCCCEEEEeeC----------CCcEEEEe
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKS-LARMTG----------HQQLINCVEFSPDGRIIASASF----------DKSIKLWD  488 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~----------h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd  488 (573)
                      ..++..+..+.+.+.|+...... ...+.-          .......++++|+++.+.++..          ++.|.++|
T Consensus       225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID  304 (373)
T 2mad_H          225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT  304 (373)
T ss_pred             CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence            33333336678888887543211 111100          0122344789999988777643          35799999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCccccccc
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~  539 (573)
                      ..+++.+..+... .....++|+|||+ +++++. .++.|.+||+.+++.+..
T Consensus       305 ~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~  356 (373)
T 2mad_H          305 GLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS  356 (373)
T ss_pred             CCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence            9999988887533 2578999999999 777777 589999999999988776

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.56  E-value=4.2e-12  Score=122.92  Aligned_cols=299  Identities=12%  Similarity=0.018  Sum_probs=188.8

Q ss_pred             EEEcCCCCeEEEEeC-----CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEE
Q psy2671         213 VKFSPNGRSLASGSG-----DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWD  277 (573)
Q Consensus       213 ~~fsp~g~~las~s~-----d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd  277 (573)
                      ....|+++.+.....     +++|.+.|..+++.+.++..-..+ . ++++|||++++++.          .++.|.+||
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD  115 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD  115 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence            345789988877765     689999999999988777644444 3 99999999988775          367899999


Q ss_pred             CCCCceecccccCC------cccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671         278 SSTGKQIGQPMRGH------KQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       278 ~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  349 (573)
                      ..+++.+.....+.      ......+.     ++++++++..+..  ++.|.++|+.+.+.+..+....  ...+.-.+
T Consensus       116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a-----~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~~~~~P~g  188 (386)
T 3sjl_D          116 PVTLLPTADIELPDAPRFLVGTYPWMTS-----LTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--CYHIFPTA  188 (386)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGEE-----ECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--EEEEEEEE
T ss_pred             CCCCeEEEEEECCCccccccCCCCceEE-----EcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--cceeecCC
Confidence            99887654321110      00111223     3457887776653  6899999999999888775322  11111112


Q ss_pred             CcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee-CC
Q psy2671         350 SGLIYSASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ-CP  427 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  427 (573)
                      ...+++.+.||++.+.++.+ +........+.        ..+          ....+              ....+ .+
T Consensus       189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~--------~~~----------~~~~~--------------~~~~~~~~  236 (386)
T 3sjl_D          189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF--------HPE----------DEFLI--------------NHPAYSQK  236 (386)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCEEEECCCC--------SCT----------TSCBC--------------SCCEEETT
T ss_pred             CceeEEECCCCCEEEEECCCCCeEEEeeccee--------ccc----------ccccc--------------ccceeEcC
Confidence            33567888899999888865 44321110000        000          00000              00011 24


Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCcc-ceeeec---------c-ccccEEEEEECCCCCEEEEeeC----------CCcEEE
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKK-SLARMT---------G-HQQLINCVEFSPDGRIIASASF----------DKSIKL  486 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~---------~-h~~~v~~v~~sp~g~~las~s~----------dg~i~l  486 (573)
                      +|.++ -.+.+|++.+.|..+... ....+.         + .......++++|+++.+.....          ...|.+
T Consensus       237 dG~~~-~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v  315 (386)
T 3sjl_D          237 AGRLV-WPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  315 (386)
T ss_dssp             TTEEE-EEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCcEE-EEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence            45443 366689999999865432 111111         0 1112334788999998887643          246999


Q ss_pred             EeCCCCeEEEeecCCcceEEEEEECCCCC-EEEEE-eCCCcEEEEeCCcccccccccCcCCCEEEEEEccC
Q psy2671         487 WDGRIGKFITTLRGHVQAVYMVAWSSDSR-LLVSG-SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD  555 (573)
Q Consensus       487 wd~~~~~~~~~~~~h~~~v~~v~~s~dg~-~las~-s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d  555 (573)
                      .|..+++.+..+..- ..++.+++++|++ +|+++ ..++.|.++|..+++.+++++.- +.-+.+.+++|
T Consensus       316 iD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d  384 (386)
T 3sjl_D          316 LDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD  384 (386)
T ss_dssp             EETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred             EECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence            999999988887632 3678999999997 66664 55899999999999988766532 12234556665

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.54  E-value=3.3e-12  Score=120.03  Aligned_cols=220  Identities=10%  Similarity=0.020  Sum_probs=149.2

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEE
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT  296 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~  296 (573)
                      .++.|++++.|+.|.+||.++++.+.++..+. ..+.+++++|+|+.++  +.++.|..||. +|+.+.+...+....+.
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~   80 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ   80 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence            35689999999999999999999999988776 4688999999999888  45788999999 78776543333233455


Q ss_pred             EEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe
Q psy2671         297 ALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~  375 (573)
                      ++.+.     ++++.+++.+. ++.+..+|. .++.+..+.                              +..+.    
T Consensus        81 ~~~~~-----~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~------------------------------~~~~~----  120 (276)
T 3no2_A           81 TARIL-----PDGNALVAWCGHPSTILEVNM-KGEVLSKTE------------------------------FETGI----  120 (276)
T ss_dssp             EEEEC-----TTSCEEEEEESTTEEEEEECT-TSCEEEEEE------------------------------ECCSC----
T ss_pred             ccEEC-----CCCCEEEEecCCCCEEEEEeC-CCCEEEEEe------------------------------ccCCC----
Confidence            55543     36777877665 555555553 333332221                              10000    


Q ss_pred             ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671         376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                      ...|.. ...                                     ....++|.++++...++.|..||.. ++. +..
T Consensus       121 ~~~~~~-~~~-------------------------------------v~~~~~G~~lv~~~~~~~v~~~d~~-G~~-~w~  160 (276)
T 3no2_A          121 ERPHAQ-FRQ-------------------------------------INKNKKGNYLVPLFATSEVREIAPN-GQL-LNS  160 (276)
T ss_dssp             SSGGGS-CSC-------------------------------------CEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred             Cccccc-ccC-------------------------------------ceECCCCCEEEEecCCCEEEEECCC-CCE-EEE
Confidence            000000 000                                     0112567788888888888888876 433 333


Q ss_pred             eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc------ceEEEEEECCCCCEEEEEe
Q psy2671         456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV------QAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~------~~v~~v~~s~dg~~las~s  521 (573)
                      +... ....++.+.++|+++++++.++.|..+|..+|+.+..+..+.      ..+..++..++|..+++..
T Consensus       161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~  231 (276)
T 3no2_A          161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW  231 (276)
T ss_dssp             EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred             EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence            3322 335567889999999999988899999999999988875332      2377888999999988774

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.54  E-value=2.5e-12  Score=120.78  Aligned_cols=212  Identities=13%  Similarity=0.109  Sum_probs=158.2

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEecCCC-ccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCc-ceeeE
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHA-HWVNT  385 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~-~~v~~  385 (573)
                      .++.+++++.++.|.+||..+++.+..+..+. ..+.++.+.+++.++. +.++.|..||. +|+.+..+..+. ..+..
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~   81 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQT   81 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence            35678999999999999999999998888766 4678888988886655 66888999998 787776665431 22322


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeec------c
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMT------G  458 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~------~  458 (573)
                      ..+                                     .++|..+++.+. ++.+..+|... + .+..+.      +
T Consensus        82 ~~~-------------------------------------~~dG~~lv~~~~~~~~v~~vd~~G-k-~l~~~~~~~~~~~  122 (276)
T 3no2_A           82 ARI-------------------------------------LPDGNALVAWCGHPSTILEVNMKG-E-VLSKTEFETGIER  122 (276)
T ss_dssp             EEE-------------------------------------CTTSCEEEEEESTTEEEEEECTTS-C-EEEEEEECCSCSS
T ss_pred             cEE-------------------------------------CCCCCEEEEecCCCCEEEEEeCCC-C-EEEEEeccCCCCc
Confidence            222                                     366888888777 77787787632 2 222111      2


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccc
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~  538 (573)
                      +......+++.++|+++++.+.++.|..||.. |+.+.++..+ ...+.+.+.++|+.+++++.++.|..+|..+++.+.
T Consensus       123 ~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w  200 (276)
T 3no2_A          123 PHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR  200 (276)
T ss_dssp             GGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred             ccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence            22345567889999999999999999999988 9998888764 345567889999999999888899999999888876


Q ss_pred             cccCcC------CCEEEEEEccCCCEEEEe
Q psy2671         539 DLPGHG------DEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       539 ~l~~h~------~~v~~~~~s~d~~~l~s~  562 (573)
                      .+..+.      ..+..+...++|..+++.
T Consensus       201 ~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          201 RVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             EEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             EecCCCCCCccccccccceEcCCCCEEEEe
Confidence            654321      237788888999888876

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.51  E-value=1.9e-12  Score=140.05  Aligned_cols=219  Identities=18%  Similarity=0.078  Sum_probs=141.6

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCC-----CcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGD-----TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D-----~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      +|+..+.+++|||||++||.++.+     .+|++||+.+++.+...                                  
T Consensus       160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~----------------------------------  205 (741)
T 1yr2_A          160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE----------------------------------  205 (741)
T ss_dssp             ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE----------------------------------
T ss_pred             CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc----------------------------------
Confidence            455678899999999999987653     46999999987643100                                  


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCe--------------EEEEECCCCe----eeEE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT--------------VRFWDVTTQT----PLFK  244 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~--------------i~iwd~~~~~----~~~~  244 (573)
                                            .+...+..++|+|| +.|+.++.|..              |++|++.++.    .++.
T Consensus       206 ----------------------~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~  262 (741)
T 1yr2_A          206 ----------------------LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA  262 (741)
T ss_dssp             ----------------------EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC
T ss_pred             ----------------------CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec
Confidence                                  00001235789999 99998887654              8999987764    3333


Q ss_pred             ecCCCCcEEEEEEcCCCCeEEEEeeCC-----eEEEEECCCCcee-cccccCCcccEEEEEecccccCCCCCEEEEEeC-
Q psy2671         245 CEGHKHWVLCIAWSPDSKQLVSGCKNG-----VIHAWDSSTGKQI-GQPMRGHKQWITALSWEPFHLNHQCRRFASSGK-  317 (573)
Q Consensus       245 ~~~h~~~V~~v~~s~dg~~l~sgs~dg-----~i~vwd~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-  317 (573)
                      ...+...+.++.|||||++|+..+.++     .|.+||+.++... ...+..+...+....+      ++++.|+..+. 
T Consensus       263 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~------~dg~~l~~~s~~  336 (741)
T 1yr2_A          263 TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD------GVGDQLWFVSGD  336 (741)
T ss_dssp             CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE------EETTEEEEEECT
T ss_pred             cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe------ccCCEEEEEECC
Confidence            344545689999999999998877654     8999999876211 1223333333333222      24666766665 


Q ss_pred             ---CCcEEEEECCCC--eEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC-CCeeeEeccCC-cceeeEEEec
Q psy2671         318 ---DGAIRIWDVILS--QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS-DGVMCRTLEGH-AHWVNTLALS  389 (573)
Q Consensus       318 ---dg~v~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~s  389 (573)
                         ++.|.+||+..+  .....+..+...+..+.+.++..+++...|+..++|... ++...+.+..+ ...+..++++
T Consensus       337 ~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s  415 (741)
T 1yr2_A          337 GAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGR  415 (741)
T ss_dssp             TCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECC
T ss_pred             CCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecC
Confidence               345999998774  444555566666777888866678889999988888654 34444444432 3344444443

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.50  E-value=2.4e-12  Score=139.16  Aligned_cols=283  Identities=12%  Similarity=0.029  Sum_probs=160.0

Q ss_pred             cCCCCeEEEEeCCCe---EEEEEC--C---CCeeeEE------ecCCCCcEEEEEEcCCCCeEEEEeeC-----CeEEEE
Q psy2671         216 SPNGRSLASGSGDTT---VRFWDV--T---TQTPLFK------CEGHKHWVLCIAWSPDSKQLVSGCKN-----GVIHAW  276 (573)
Q Consensus       216 sp~g~~las~s~d~~---i~iwd~--~---~~~~~~~------~~~h~~~V~~v~~s~dg~~l~sgs~d-----g~i~vw  276 (573)
                      +|+|++++....++.   -.+|..  .   .+.....      ..+|...+.+++|||||++||.++.+     ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            489998876654432   555653  3   3322211      12344468899999999999877654     469999


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSA  356 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~  356 (573)
                      |+.+|+.+....  +...+..++|.|     + +.|+.++.++..+      +                     +.+-..
T Consensus       195 dl~tg~~~~~~~--~~~~~~~~~wsp-----D-~~l~~~~~~~~~~------~---------------------~~~~~~  239 (741)
T 1yr2_A          195 GVADGKPLADEL--KWVKFSGLAWLG-----N-DALLYSRFAEPKE------G---------------------QAFQAL  239 (741)
T ss_dssp             ETTTCCEEEEEE--EEEESCCCEEST-----T-SEEEEEECCCC-----------------------------------C
T ss_pred             ECCCCCCCCccC--CCceeccEEEEC-----C-CEEEEEEecCccc------c---------------------cccccC
Confidence            999987643211  111113455554     5 6777776654310      0                     000001


Q ss_pred             eCCCeEEEEeCCCCe----eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         357 SQDRTIKVWRASDGV----MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       357 s~d~~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      .....|.+|++.++.    ++.....+..++..+.+                                     +|+|++|
T Consensus       240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~-------------------------------------SpDG~~l  282 (741)
T 1yr2_A          240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASV-------------------------------------SSDGRWV  282 (741)
T ss_dssp             CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE-------------------------------------CTTSCEE
T ss_pred             CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEE-------------------------------------CCCCCEE
Confidence            123345555554432    11111111112222222                                     3556666


Q ss_pred             EEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC----CcEEEEeCCCC--eEEEeecC
Q psy2671         433 VSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD----KSIKLWDGRIG--KFITTLRG  500 (573)
Q Consensus       433 ~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d----g~i~lwd~~~~--~~~~~~~~  500 (573)
                      +..+.+     ..|++||+.++... ...+..+...+... ++|+|+.|+..+.+    +.|.+||..++  +....+..
T Consensus       283 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~  361 (741)
T 1yr2_A          283 VITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE  361 (741)
T ss_dssp             EEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred             EEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence            655543     36778887654222 34444444444444 34899988877653    45999998874  34444455


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCC-cccccccccC-cCCCEEEEEEccCCCEEE----EeeCCCcEEEcc
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK-TKKIEQDLPG-HGDEVYAVDWAPDGEKVA----SGGKDKVLRLWQ  572 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~-~~~~~~~l~~-h~~~v~~~~~s~d~~~l~----s~~~d~~i~iw~  572 (573)
                      +...+..++|+ ++.++++...|+..+||.+. .++..+.+.. +.+.|..+.++||++.|+    +....++|++|+
T Consensus       362 ~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d  438 (741)
T 1yr2_A          362 SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD  438 (741)
T ss_dssp             CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred             CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence            55567778887 66788888899988777654 3444555553 356788999999998776    223346788775

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.47  E-value=6.3e-10  Score=109.17  Aligned_cols=248  Identities=12%  Similarity=0.015  Sum_probs=146.5

Q ss_pred             EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCe
Q psy2671         212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGV  272 (573)
Q Consensus       212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~  272 (573)
                      .++|||||++++.+.          .++.|.+||..+.+.+....-.       ...-..++|+|||++|+++..  ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            788999999998875          3678999999988776654321       122357899999999998874  478


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-----CCCccE-EEEE
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-----SHTRSV-TCIR  346 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~h~~~v-~~~~  346 (573)
                      |.++| .+++.+...+.. ...   +.+.|    ...+.+++.+.||.+.++|. +++......     ....++ ....
T Consensus       150 v~viD-~t~~~~~~~i~~-~~~---~~~~~----~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~  219 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSS-PTC---YHIHP----GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPA  219 (373)
T ss_pred             EEEEE-CCCCEEeEEcCC-Cce---EEEEe----CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecce
Confidence            99999 888765330111 111   11112    12245677788999999999 766553221     111111 1122


Q ss_pred             ECC-CcEEEEEeCCCeEEEEeCCCCee--eEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         347 WGG-SGLIYSASQDRTIKVWRASDGVM--CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       347 ~~~-~~~l~s~s~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                      +.. .+.++..+..+.+.+.|+..+..  ...+.-.........+.+...                           ...
T Consensus       220 ~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~---------------------------~~~  272 (373)
T 2mad_H          220 QANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGW---------------------------QQV  272 (373)
T ss_pred             eEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCce---------------------------EeE
Confidence            222 23333334677888888764421  111110000000001111100                           011


Q ss_pred             eeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEee-CCCcEEEEeCCC
Q psy2671         424 AQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASAS-FDKSIKLWDGRI  491 (573)
Q Consensus       424 ~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s-~dg~i~lwd~~~  491 (573)
                      ..+|++..+..+..          .+.|.++|+.+.+. ...+.. .....+++|+|||+ +++++. .++.|.++|..+
T Consensus       273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v-v~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t  350 (373)
T 2mad_H          273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT-SSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA  350 (373)
T ss_pred             EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE-EEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence            23456666555432          35799999877543 333322 22478999999999 777776 589999999999


Q ss_pred             CeEEEee
Q psy2671         492 GKFITTL  498 (573)
Q Consensus       492 ~~~~~~~  498 (573)
                      ++.+..+
T Consensus       351 ~~vv~~i  357 (373)
T 2mad_H          351 GDQDQST  357 (373)
T ss_pred             CCEEeee
Confidence            9988773

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.47  E-value=2.5e-11  Score=117.51  Aligned_cols=261  Identities=14%  Similarity=0.044  Sum_probs=155.1

Q ss_pred             EEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCeE
Q psy2671         213 VKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGVI  273 (573)
Q Consensus       213 ~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~i  273 (573)
                      +++||||++++.+.          .++.|.+||..+.+.+.++.-.       ...-..++|+|||++|+++..  ++.|
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V  162 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV  162 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence            89999999887765          3678999999999887765311       112356899999999988864  6899


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-CeEEEEecCC----CccEE-EEEE
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-SQCVRVLTSH----TRSVT-CIRW  347 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~h----~~~v~-~~~~  347 (573)
                      .++|+.+++.+........    ... .|.    ..+.+++.+.||.+-+.++.. ++.......+    ...+. ...|
T Consensus       163 sVID~~t~~vv~tI~v~g~----~~~-~P~----g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~  233 (386)
T 3sjl_D          163 GVVDLEGKAFKRMLDVPDC----YHI-FPT----APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY  233 (386)
T ss_dssp             EEEETTTTEEEEEEECCSE----EEE-EEE----ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred             EEEECCCCcEEEEEECCCc----cee-ecC----CCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence            9999999876543211111    111 121    235677888899999999876 4432211111    11111 1244


Q ss_pred             -CCCcEEEEEeCCCeEEEEeCCCCee--eEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhee
Q psy2671         348 -GGSGLIYSASQDRTIKVWRASDGVM--CRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ  423 (573)
Q Consensus       348 -~~~~~l~s~s~d~~i~vw~~~~~~~--~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (573)
                       .+++.++-.+.++++.+.|...+..  ...+.--.. .+. ..+.+..                           ....
T Consensus       234 ~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~-~g~~p~g---------------------------~q~~  285 (386)
T 3sjl_D          234 SQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA-DGWRPGG---------------------------WQQV  285 (386)
T ss_dssp             ETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH-TTEEECS---------------------------SSCE
T ss_pred             EcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc-ccccCCC---------------------------ccee
Confidence             3566555577789999999865532  111110000 000 0000000                           0001


Q ss_pred             eeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEE-eeCCCcEEEEeCCC
Q psy2671         424 AQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIAS-ASFDKSIKLWDGRI  491 (573)
Q Consensus       424 ~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las-~s~dg~i~lwd~~~  491 (573)
                      ...+++..+.....          ...|.+.|+.+.+.......++  .+..|+|+||++ +|++ ...++.|.++|..+
T Consensus       286 a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t  363 (386)
T 3sjl_D          286 AYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALSTGDKTLYIHDAES  363 (386)
T ss_dssp             EEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--EECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred             eECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC--CcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence            12345555554432          2478899988765433333333  477999999997 6655 45689999999999


Q ss_pred             CeEEEeecCCcceEEEEEECCC
Q psy2671         492 GKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                      ++.+.++..-.. -+.+.+++|
T Consensus       364 ~k~~~~i~~~~~-p~~l~~s~d  384 (386)
T 3sjl_D          364 GEELRSVNQLGH-GPQVITTAD  384 (386)
T ss_dssp             CCEEEEECCCCS-SCCEEEECC
T ss_pred             CcEEEEecCCCC-CceeEECCc
Confidence            999888763211 123445555

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.44  E-value=9.1e-11  Score=112.70  Aligned_cols=232  Identities=10%  Similarity=0.119  Sum_probs=153.8

Q ss_pred             EEEEEecccccCCCCCEEEE-------EeCCCcEEEEECCCCeEEEEec----CCCccEEEEEECCC-cEEEEEeCCCeE
Q psy2671         295 ITALSWEPFHLNHQCRRFAS-------SGKDGAIRIWDVILSQCVRVLT----SHTRSVTCIRWGGS-GLIYSASQDRTI  362 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s-------~~~dg~v~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~-~~l~s~s~d~~i  362 (573)
                      ..+++|.+     +++.+++       ...++.|..||..+++......    ++...+.++++.++ +.++.++..+.|
T Consensus        20 ~~~~~~~~-----~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l   94 (314)
T 1pjx_A           20 AEGPVFDK-----NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGL   94 (314)
T ss_dssp             CEEEEECT-----TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEE
T ss_pred             ccCceECC-----CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCE
Confidence            34566543     4556666       4678899999987776543322    24467889999988 888888777789


Q ss_pred             EEEeCCCCeeeEe-ccCC----cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         363 KVWRASDGVMCRT-LEGH----AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       363 ~vw~~~~~~~~~~-~~~~----~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      .+|+.. +..... ....    ...+..+++.                                     ++|.+.++...
T Consensus        95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d-------------------------------------~~g~l~v~~~~  136 (314)
T 1pjx_A           95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFD-------------------------------------YEGNLWITAPA  136 (314)
T ss_dssp             EEEETT-SCEEECCSBCTTSCBCBCCCEEEEC-------------------------------------TTSCEEEEECB
T ss_pred             EEEeCC-CCEEEEEeccCCCccccCCcCEEEC-------------------------------------CCCCEEEEecC
Confidence            999987 654322 2110    1123333333                                     44555555544


Q ss_pred             C---------------CeEEEEcCCCCccceeeeccccccEEEEEEC----CCCCEEEE-eeCCCcEEEEeCC-CCe---
Q psy2671         438 D---------------FTLFLWNPEKEKKSLARMTGHQQLINCVEFS----PDGRIIAS-ASFDKSIKLWDGR-IGK---  493 (573)
Q Consensus       438 d---------------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s----p~g~~las-~s~dg~i~lwd~~-~~~---  493 (573)
                      +               +.|..|+.. +.  ...+..+......++++    |+|+.|.. ...++.|.+||.. .++   
T Consensus       137 ~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~  213 (314)
T 1pjx_A          137 GEVAPADYTRSMQEKFGSIYCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN  213 (314)
T ss_dssp             CBCTTSCCCBTTSSSCEEEEEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred             cccccccccccccCCCCeEEEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence            3               567777765 22  22222233446889999    99976544 4567899999976 443   


Q ss_pred             --EEEeecCCc-ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEE-EeeCCCcEE
Q psy2671         494 --FITTLRGHV-QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVA-SGGKDKVLR  569 (573)
Q Consensus       494 --~~~~~~~h~-~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~-s~~~d~~i~  569 (573)
                        ....+.++. .....++++++|++.++...++.|.+||..+++....+..+...+.+++|+|+++.|. +...++.|.
T Consensus       214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~  293 (314)
T 1pjx_A          214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW  293 (314)
T ss_dssp             EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred             ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence              233444444 5678899999999888887889999999987777666666667899999999999555 444556777


Q ss_pred             Ecc
Q psy2671         570 LWQ  572 (573)
Q Consensus       570 iw~  572 (573)
                      .|+
T Consensus       294 ~~~  296 (314)
T 1pjx_A          294 KFE  296 (314)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            664

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.44  E-value=1e-10  Score=112.29  Aligned_cols=242  Identities=11%  Similarity=0.116  Sum_probs=154.9

Q ss_pred             CcEEEEEEcCCCCeEEE-------EeCCCeEEEEECCCCeeeEEec----CCCCcEEEEEEcCC-CCeEEEEeeCCeEEE
Q psy2671         208 EAVISVKFSPNGRSLAS-------GSGDTTVRFWDVTTQTPLFKCE----GHKHWVLCIAWSPD-SKQLVSGCKNGVIHA  275 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las-------~s~d~~i~iwd~~~~~~~~~~~----~h~~~V~~v~~s~d-g~~l~sgs~dg~i~v  275 (573)
                      ....+++|+++|+.+++       +..++.|.+||..+++......    ++...+.+++++++ |+ |..++..+.|.+
T Consensus        18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~~   96 (314)
T 1pjx_A           18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLLV   96 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEEE
T ss_pred             CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEEE
Confidence            34578999999987777       5778899999987776432221    24467899999999 65 444444557899


Q ss_pred             EECCCCceecc-c--ccC-CcccEEEEEecccccCCCCCEEEEEeCC---------------CcEEEEECCCCeEEEEec
Q psy2671         276 WDSSTGKQIGQ-P--MRG-HKQWITALSWEPFHLNHQCRRFASSGKD---------------GAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       276 wd~~~~~~~~~-~--~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~d---------------g~v~iwd~~~~~~~~~~~  336 (573)
                      ||.. ++.... .  ..+ ....+.++.+.+     +++.+++...+               +.|..|+.. ++.... .
T Consensus        97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-----~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~-~  168 (314)
T 1pjx_A           97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-----EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV-D  168 (314)
T ss_dssp             EETT-SCEEECCSBCTTSCBCBCCCEEEECT-----TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE-E
T ss_pred             EeCC-CCEEEEEeccCCCccccCCcCEEECC-----CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe-c
Confidence            9988 654311 1  011 123456676654     56666666544               466667655 433322 2


Q ss_pred             CCCccEEEEEEC----CCc-EEEEE-eCCCeEEEEeCC-CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         337 SHTRSVTCIRWG----GSG-LIYSA-SQDRTIKVWRAS-DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       337 ~h~~~v~~~~~~----~~~-~l~s~-s~d~~i~vw~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      .+......++++    +++ .++.+ ..++.|.+|+.. ++....                                   
T Consensus       169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~-----------------------------------  213 (314)
T 1pjx_A          169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN-----------------------------------  213 (314)
T ss_dssp             EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE-----------------------------------
T ss_pred             cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc-----------------------------------
Confidence            223345667777    766 44444 456777777643 221100                                   


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccc-ccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ-QLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~-~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                                                     ..         ....+.++. .....++++++|+++++...++.|.+||
T Consensus       214 -------------------------------~~---------~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d  253 (314)
T 1pjx_A          214 -------------------------------KK---------VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             -------------------------------EE---------EEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred             -------------------------------ce---------EEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence                                           00         001111122 3356799999999998888889999999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCCEE-EEEeCCCcEEEEeCCc
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSRLL-VSGSADSTLKVWNMKT  533 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~l-as~s~D~~v~vwd~~~  533 (573)
                      ..+++.+..+..+...+.+++|+|+|+.| ++...++.|..|++..
T Consensus       254 ~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            98777666666666788999999999955 4555678899999865

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.41  E-value=1.5e-10  Score=114.24  Aligned_cols=282  Identities=14%  Similarity=0.073  Sum_probs=177.9

Q ss_pred             CCCCeEEEEeC-C----CeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------eCCeEEEEECCCC
Q psy2671         217 PNGRSLASGSG-D----TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------KNGVIHAWDSSTG  281 (573)
Q Consensus       217 p~g~~las~s~-d----~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~dg~i~vwd~~~~  281 (573)
                      |+++.+..+.. +    ++|.+.|..+++.+.++..-..+  .++++|||++|+++.          .++.|.++|..++
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~  159 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF  159 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence            46666655544 2    69999999999988777644445  799999999998876          4678999999988


Q ss_pred             ceecccccC-Cc-----ccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEE
Q psy2671         282 KQIGQPMRG-HK-----QWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLI  353 (573)
Q Consensus       282 ~~~~~~~~~-h~-----~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l  353 (573)
                      +.+.....+ ..     .....     +.++++++++..+..  ++.|.+.|+.+.+.+..+..-..  ..+...+...+
T Consensus       160 ~vv~~I~v~g~~r~~~g~~P~~-----~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~  232 (426)
T 3c75_H          160 LPIADIELPDAPRFLVGTYQWM-----NALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVF  232 (426)
T ss_dssp             CEEEEEEETTCCCCCBSCCGGG-----SEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEE
T ss_pred             cEEEEEECCCccccccCCCcce-----EEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEE
Confidence            765432111 00     00111     224567888877664  57899999999988777653211  11111122355


Q ss_pred             EEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       354 ~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      ++.+.||++.+.+..++....... +.                         +.....      .........+++..++
T Consensus       233 v~~~~dG~~~~V~~~~~~v~~~~~-~~-------------------------~~v~~~------p~~~~~~~~~dg~~~~  280 (426)
T 3c75_H          233 YMNCRDGSLARVDFADGETKVTNT-EV-------------------------FHTEDE------LLINHPAFSLRSGRLV  280 (426)
T ss_dssp             EEEETTSSEEEEECCTTCCEEEEC-CC-------------------------CSCTTS------CBCSCCEECTTTCEEE
T ss_pred             EEEcCCCCEEEEECCCCcEEEEee-ee-------------------------eccCCC------ceeeEeeecCCCCEEE
Confidence            667778888777775544331110 00                         000000      0000011235566666


Q ss_pred             EEeCCCeEEEEcCCCCccce-eeec-------c---ccccEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCC
Q psy2671         434 SGSDDFTLFLWNPEKEKKSL-ARMT-------G---HQQLINCVEFSPDGRIIASASF----------DKSIKLWDGRIG  492 (573)
Q Consensus       434 sg~~dg~i~lwd~~~~~~~~-~~~~-------~---h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd~~~~  492 (573)
                      ..+..+.+.+.|........ ..+.       .   .......++|+|+++.+.++..          ++.|.+.|..++
T Consensus       281 ~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~  360 (426)
T 3c75_H          281 WPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG  360 (426)
T ss_dssp             EEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred             EEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence            66677888888875432111 0000       0   0011123689999887776532          357999999999


Q ss_pred             eEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCcccccccc
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~l  540 (573)
                      +.+..+... ...+.++|+|||+ +++++. .++.|.++|+.+++.++++
T Consensus       361 kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          361 ERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             CEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             eEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            998887633 2478899999999 888887 5999999999999988775

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.37  E-value=4.1e-11  Score=116.53  Aligned_cols=180  Identities=12%  Similarity=0.026  Sum_probs=132.6

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      .+..+++++...++++|+.|+ ++||++++.+......                           .++     +++..  
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~---------------------------~~~-----~~~~~--   83 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD---------------------------STP-----LTFKW--   83 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS---------------------------SCC-----CCCSE--
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc---------------------------ccc-----ccceE--
Confidence            689999999999999999985 5669986532110000                           000     00000  


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG  271 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg  271 (573)
                                 ...+.. |..++|  |+++|+++ .++.|++||+.+.........|...+.++.+.+.  .+++++.||
T Consensus        84 -----------~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG  146 (388)
T 1xip_A           84 -----------EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVN  146 (388)
T ss_dssp             -----------EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTS
T ss_pred             -----------EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCC
Confidence                       012445 999999  99999999 8899999999876655555667777888888754  388999999


Q ss_pred             eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE--EEEe------c---CCCc
Q psy2671         272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC--VRVL------T---SHTR  340 (573)
Q Consensus       272 ~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~--~~~~------~---~h~~  340 (573)
                      .|.+||+.++....     +...|++++|+|.     |  ++.+..||++++|+......  .+.+      .   +|..
T Consensus       147 ~L~v~dl~~~~~~~-----~~~~Vs~v~WSpk-----G--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~  214 (388)
T 1xip_A          147 DLSALDLRTKSTKQ-----LAQNVTSFDVTNS-----Q--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEY  214 (388)
T ss_dssp             EEEEEETTTCCEEE-----EEESEEEEEECSS-----E--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTS
T ss_pred             CEEEEEccCCcccc-----ccCCceEEEEcCC-----c--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCe
Confidence            99999998776531     4568999999883     3  67899999999999877764  4555      2   3788


Q ss_pred             cEEEEEECCCcEEEE
Q psy2671         341 SVTCIRWGGSGLIYS  355 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s  355 (573)
                      .|.++.|.+++.++.
T Consensus       215 ~V~sI~wl~~~~flv  229 (388)
T 1xip_A          215 SPLSVTILSPQDFLA  229 (388)
T ss_dssp             EEEEEEESSSSEEEE
T ss_pred             eEEEEEEecCCeEEE
Confidence            999999998876544

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.36  E-value=8.1e-11  Score=126.03  Aligned_cols=115  Identities=21%  Similarity=0.251  Sum_probs=82.1

Q ss_pred             CccccEEEEEEcCCCCeeE-----EeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         108 GHAEAVISVKFSPNGRSLA-----SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~la-----t~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      +|...+.+++|||||++||     +|+.+.+|+|||+.+++.+..                                   
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----------------------------------  170 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-----------------------------------  170 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----------------------------------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-----------------------------------
Confidence            5777899999999999998     444457899999998864310                                   


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCc--EEEEEEcCCCCeEEEEeCCC-------------eEEEEECCCCe----eeE
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEA--VISVKFSPNGRSLASGSGDT-------------TVRFWDVTTQT----PLF  243 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~--V~~~~fsp~g~~las~s~d~-------------~i~iwd~~~~~----~~~  243 (573)
                                             +...  ...++|+ ||+.|+.++.+.             .|++|++.++.    .++
T Consensus       171 -----------------------~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~  226 (693)
T 3iuj_A          171 -----------------------PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVF  226 (693)
T ss_dssp             -----------------------EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEE
T ss_pred             -----------------------ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEE
Confidence                                   0001  1356799 999999888774             39999988754    344


Q ss_pred             EecC-CCCcEEEEEEcCCCCeEEEEee----CCeEEEEECCCC
Q psy2671         244 KCEG-HKHWVLCIAWSPDSKQLVSGCK----NGVIHAWDSSTG  281 (573)
Q Consensus       244 ~~~~-h~~~V~~v~~s~dg~~l~sgs~----dg~i~vwd~~~~  281 (573)
                      .... |...+.++.|||||++|+....    +..|.+||+.++
T Consensus       227 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~  269 (693)
T 3iuj_A          227 GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE  269 (693)
T ss_dssp             SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred             ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence            4444 5566889999999998865433    246777777554

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.36  E-value=9.4e-10  Score=109.50  Aligned_cols=233  Identities=11%  Similarity=0.126  Sum_probs=153.9

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC--cEEEEECC
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG--AIRIWDVI  327 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~  327 (573)
                      .....|+|+++++.+++...++.|++||..++..... .... .... ++|.|     +++.+..+..++  .|..++..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~-~~~~-~~~~-ia~~~-----~g~~l~~~d~~~~~~I~~~d~~  202 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV-HPGF-KGGK-PAVTK-----DKQRVYSIGWEGTHTVYVYMKA  202 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE-EETC-CBCB-CEECT-----TSSEEEEEBSSTTCEEEEEEGG
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe-eccC-CCCc-eeEec-----CCCcEEEEecCCCceEEEEEcC
Confidence            3478999999998777777789999999987754321 1111 1112 55544     566777777765  78888876


Q ss_pred             CCeEEEEe----cCCCccEEEEEECC-CcEEEEEeCCCeEEEEeCCCCeeeEe----ccCCccee--eEEEeccCceeEE
Q psy2671         328 LSQCVRVL----TSHTRSVTCIRWGG-SGLIYSASQDRTIKVWRASDGVMCRT----LEGHAHWV--NTLALSTDYLMRV  396 (573)
Q Consensus       328 ~~~~~~~~----~~h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~~~~~~~~~----~~~~~~~v--~~~~~s~~~~~~~  396 (573)
                      .+.....+    ......+.++++++ ++.|+.+..++.|..|+..++.....    ..++..+-  ..+          
T Consensus       203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~i----------  272 (409)
T 3hrp_A          203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYL----------  272 (409)
T ss_dssp             GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEE----------
T ss_pred             CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccE----------
Confidence            55433333    22445677889988 67888888889999999876643211    11111110  022          


Q ss_pred             EEcCCCceeeCCCCchhhhhhhhhheeeeCC-CCcEEEEEeCCCeEEEEcCCCCccceeeecccc---------------
Q psy2671         397 EATSTGGFKYDPANPEESSKHALAKYQAQCP-EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ---------------  460 (573)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~---------------  460 (573)
                                                 +..| ++.++++-...+.|+.|+....   ...+.++.               
T Consensus       273 ---------------------------a~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~  322 (409)
T 3hrp_A          273 ---------------------------IYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALF  322 (409)
T ss_dssp             ---------------------------EEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBC
T ss_pred             ---------------------------EEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEe
Confidence                                       2335 3556666677788888887643   22222221               


Q ss_pred             ccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCeEEEeecCC---------------cceEEEEEECCCCCEEEEEeCCC
Q psy2671         461 QLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGKFITTLRGH---------------VQAVYMVAWSSDSRLLVSGSADS  524 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~~~~~~~~h---------------~~~v~~v~~s~dg~~las~s~D~  524 (573)
                      .....++++|+|+++++-+ .++.|+.||..+++. .++.++               ......++++++|.++++-..++
T Consensus       323 ~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~  401 (409)
T 3hrp_A          323 AQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK  401 (409)
T ss_dssp             SSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC
T ss_pred             CCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC
Confidence            3478899999999888877 899999999777763 444333               24578999999988888888888


Q ss_pred             cEEEEeC
Q psy2671         525 TLKVWNM  531 (573)
Q Consensus       525 ~v~vwd~  531 (573)
                      .|+.+++
T Consensus       402 ~Ir~i~~  408 (409)
T 3hrp_A          402 AIRKYAV  408 (409)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEe
Confidence            8888765

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.35  E-value=7.8e-10  Score=109.24  Aligned_cols=308  Identities=10%  Similarity=-0.002  Sum_probs=186.5

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCC---------CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGH---------KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h---------~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      +..+..++.++.|..+|..+++.+......         ...+.+. ...++..++.++.++.|..+|..+|+.+.+...
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            567888888999999999999888765542         1223222 122456788899999999999999987543211


Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE-----EEEEECCCcEEEEEeCCCeEEE
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV-----TCIRWGGSGLIYSASQDRTIKV  364 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~l~s~s~d~~i~v  364 (573)
                      ...  +   ...|.   ..+..+..++.++.+..+|..+++............     ...... ++.++.++.++.+..
T Consensus       132 ~~~--~---~~~p~---~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~  202 (376)
T 3q7m_A          132 AGE--A---LSRPV---VSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSA  202 (376)
T ss_dssp             SSC--C---CSCCE---EETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEE
T ss_pred             CCc--e---EcCCE---EECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEE
Confidence            110  0   00111   123467778889999999999988776654332111     111112 467888899999999


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEE
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLW  444 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lw  444 (573)
                      +|..+|+..-........-.      .   ..     ..+. . .            .......+..+..++.++.+..+
T Consensus       203 ~d~~tG~~~w~~~~~~~~~~------~---~~-----~~~~-~-~------------~~~p~~~~~~v~~~~~~g~l~~~  254 (376)
T 3q7m_A          203 VLMEQGQMIWQQRISQATGS------T---EI-----DRLS-D-V------------DTTPVVVNGVVFALAYNGNLTAL  254 (376)
T ss_dssp             EETTTCCEEEEEECCC--------------------------C-C------------CCCCEEETTEEEEECTTSCEEEE
T ss_pred             EECCCCcEEEEEecccCCCC------c---cc-----cccc-c-c------------CCCcEEECCEEEEEecCcEEEEE
Confidence            99988876533321100000      0   00     0000 0 0            00000124567778889999999


Q ss_pred             cCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC-CcceEEEEEECCCCCEEEEEeCC
Q psy2671         445 NPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG-HVQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       445 d~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~-h~~~v~~v~~s~dg~~las~s~D  523 (573)
                      |..+++.......   .....+..  ++..+..++.++.+..+|..+++.+..... ....+.....  .+..|+.++.+
T Consensus       255 d~~tG~~~w~~~~---~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~  327 (376)
T 3q7m_A          255 DLRSGQIMWKREL---GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSE  327 (376)
T ss_dssp             ETTTCCEEEEECC---CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTT
T ss_pred             ECCCCcEEeeccC---CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCC
Confidence            9887654322211   22333443  356777888899999999999988766542 1112222222  24678888899


Q ss_pred             CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         524 STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       524 ~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.|..+|..+++.+.........+.+.-... +..|..++.+|.|+.|+
T Consensus       328 g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          328 GYLHWINVEDGRFVAQQKVDSSGFQTEPVAA-DGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             SEEEEEETTTCCEEEEEECCTTCBCSCCEEE-TTEEEEEBTTSCEEEEE
T ss_pred             CeEEEEECCCCcEEEEEecCCCcceeCCEEE-CCEEEEEeCCCEEEEEe
Confidence            9999999999987655543223332211112 45788899999998886

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.34  E-value=8.4e-11  Score=125.04  Aligned_cols=306  Identities=13%  Similarity=0.134  Sum_probs=185.4

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      +..++.++.++.|.-+|..+++.+.+...+...          + ..++.  ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence            556777888999999999999998887543221          0 11222  3567899999999999999999876543


Q ss_pred             ccC-CcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEecC--CCc------------------
Q psy2671         288 MRG-HKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVLTS--HTR------------------  340 (573)
Q Consensus       288 ~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~--h~~------------------  340 (573)
                      ... +......+...|..  .++ .++.++      .+|.|+.||..+++.+..+..  +..                  
T Consensus       148 ~~~~~~~~~~~~~~sP~v--~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g  224 (689)
T 1yiq_A          148 DTRADHKRSYTITGAPRV--VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG  224 (689)
T ss_dssp             ECCSCTTSCCBCCSCCEE--ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred             cCcCCCCCCccccCCcEE--ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence            222 11111111111211  122 333332      378999999999987765431  000                  


Q ss_pred             -----------cEEEEEECC-CcEEEEEeCCCe-------------------EEEEeCCCCeeeEeccC--CcceeeEEE
Q psy2671         341 -----------SVTCIRWGG-SGLIYSASQDRT-------------------IKVWRASDGVMCRTLEG--HAHWVNTLA  387 (573)
Q Consensus       341 -----------~v~~~~~~~-~~~l~s~s~d~~-------------------i~vw~~~~~~~~~~~~~--~~~~v~~~~  387 (573)
                                 ....+.+.+ .+.++.++.++.                   |..+|..+|+..-.++.  |..+-.  .
T Consensus       225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~--~  302 (689)
T 1yiq_A          225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY--T  302 (689)
T ss_dssp             STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC--C
T ss_pred             ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc--c
Confidence                       001344544 457888877763                   88888888876644432  211100  0


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeeccc-----
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTGH-----  459 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h-----  459 (573)
                      .... ....                           ....+|   ..++.++.+|.++++|..+++........+     
T Consensus       303 ~~~~-~~l~---------------------------d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~  354 (689)
T 1yiq_A          303 ATQH-MILA---------------------------ELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTK  354 (689)
T ss_dssp             CCSC-EEEE---------------------------EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred             CCCC-cEEE---------------------------eeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccc
Confidence            0000 0000                           000123   368888899999999988765431111000     


Q ss_pred             ----------------------cc-----------cEEEEEECCCCCEEEEeeC--------------------------
Q psy2671         460 ----------------------QQ-----------LINCVEFSPDGRIIASASF--------------------------  480 (573)
Q Consensus       460 ----------------------~~-----------~v~~v~~sp~g~~las~s~--------------------------  480 (573)
                                            ..           .-..++|+|+..++.+...                          
T Consensus       355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  434 (689)
T 1yiq_A          355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL  434 (689)
T ss_dssp             EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred             ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence                                  00           0112688998888776532                          


Q ss_pred             -------------------CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc
Q psy2671         481 -------------------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP  541 (573)
Q Consensus       481 -------------------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~  541 (573)
                                         +|.++.||+.+++.+..++.+.. ...-.++..+.+++.++.|+.++.||.++++.+..+.
T Consensus       435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~  513 (689)
T 1yiq_A          435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP  513 (689)
T ss_dssp             EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeee
Confidence                               47899999999998887765432 2223455678899999999999999999999886665


Q ss_pred             CcCC-CEEEEEEccCCCEEE
Q psy2671         542 GHGD-EVYAVDWAPDGEKVA  560 (573)
Q Consensus       542 ~h~~-~v~~~~~s~d~~~l~  560 (573)
                      ...+ ...-+.|+.||++.+
T Consensus       514 ~~~~~~~~p~ty~~~G~qyv  533 (689)
T 1yiq_A          514 AASGVMAAPVTYSVDGEQYV  533 (689)
T ss_dssp             CSSCCCSCCEEEEETTEEEE
T ss_pred             CCCCcccCceEEEECCEEEE
Confidence            3322 123466788887544

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.32  E-value=1.2e-09  Score=107.77  Aligned_cols=261  Identities=11%  Similarity=0.063  Sum_probs=159.0

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEE
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITA  297 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~  297 (573)
                      ++..++.++.++.|..+|..+++.+................  +..++.++.++.|..+|..+|+.+.......  .+..
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~--~~~~  177 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDM--PSLS  177 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC--Ccee
Confidence            35578888899999999999999887665433221111222  4478888999999999999998664321111  0000


Q ss_pred             E--EecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc----------EEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         298 L--SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS----------VTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       298 ~--~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~----------v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      .  ...|..   .+..+..++.++.+..+|..+++...........          +.......++.++.++.++.+..+
T Consensus       178 ~~~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~  254 (376)
T 3q7m_A          178 LRGESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL  254 (376)
T ss_dssp             -CCCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred             ecCCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence            0  001111   1346777788999999999988876554322110          000001124678888999999999


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEc
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN  445 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd  445 (573)
                      |..+|+..-......  ...+.                                       ..+..+..++.++.+..+|
T Consensus       255 d~~tG~~~w~~~~~~--~~~~~---------------------------------------~~~~~l~~~~~~g~l~~~d  293 (376)
T 3q7m_A          255 DLRSGQIMWKRELGS--VNDFI---------------------------------------VDGNRIYLVDQNDRVMALT  293 (376)
T ss_dssp             ETTTCCEEEEECCCC--EEEEE---------------------------------------EETTEEEEEETTCCEEEEE
T ss_pred             ECCCCcEEeeccCCC--CCCce---------------------------------------EECCEEEEEcCCCeEEEEE
Confidence            998887653322110  00000                                       1245677788889999999


Q ss_pred             CCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEE-EEECCCCCEEEEEeCCC
Q psy2671         446 PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM-VAWSSDSRLLVSGSADS  524 (573)
Q Consensus       446 ~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~-v~~s~dg~~las~s~D~  524 (573)
                      ..+++............+.....  .+..|+.++.+|.+..+|..+++.+.........+.. ...  .+..|+.++.+|
T Consensus       294 ~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G  369 (376)
T 3q7m_A          294 IDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDG  369 (376)
T ss_dssp             TTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTS
T ss_pred             CCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCC
Confidence            88765433222111112222222  2467888889999999999999987766543222221 111  245777888999


Q ss_pred             cEEEEe
Q psy2671         525 TLKVWN  530 (573)
Q Consensus       525 ~v~vwd  530 (573)
                      .|..|+
T Consensus       370 ~l~~~~  375 (376)
T 3q7m_A          370 TVYSIT  375 (376)
T ss_dssp             CEEEEE
T ss_pred             EEEEEe
Confidence            999886

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.30  E-value=2.1e-10  Score=111.73  Aligned_cols=263  Identities=11%  Similarity=0.045  Sum_probs=161.8

Q ss_pred             CcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec-----ccccCCcccEEEEEecccccCCCCCEEEEEeC-----
Q psy2671         250 HWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG-----QPMRGHKQWITALSWEPFHLNHQCRRFASSGK-----  317 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~-----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-----  317 (573)
                      .....++++|+|+.+++...  ++.+++|.+.+++...     ....++-..+.++.+.+     +++.+++...     
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~-----~g~L~v~D~g~~~~~   91 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDG-----NGIVWMLDNGNQSKS   91 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECS-----SSEEEEEECHHHHTS
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcC-----CCcEEEEcCCCCcCC
Confidence            56889999999998877542  3435555554554321     11123445678888765     4555554433     


Q ss_pred             CCcEEEEECCCCeEEEEecCC------CccEEEEEECC-CcEEEEE-e---CCCeEEEEeCCCCeeeEeccCCcceeeEE
Q psy2671         318 DGAIRIWDVILSQCVRVLTSH------TRSVTCIRWGG-SGLIYSA-S---QDRTIKVWRASDGVMCRTLEGHAHWVNTL  386 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h------~~~v~~~~~~~-~~~l~s~-s---~d~~i~vw~~~~~~~~~~~~~~~~~v~~~  386 (573)
                      ++.|.+||+.+++.++.+...      ...+..+++.+ .+.++.+ +   .++.|.+||..++...+.+.+|.....  
T Consensus        92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~--  169 (343)
T 2qe8_A           92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP--  169 (343)
T ss_dssp             CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC--
T ss_pred             CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc--
Confidence            578999999988866655432      23457888875 4565444 4   578999999988877666655422100  


Q ss_pred             EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEE
Q psy2671         387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV  466 (573)
Q Consensus       387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v  466 (573)
                          +.                              ....++|..+.+.+.+++++.|.               ..++.|
T Consensus       170 ----~~------------------------------~~~~~~g~~~~~~~~~g~~~~~~---------------~~~~gi  200 (343)
T 2qe8_A          170 ----ED------------------------------IDLVIDGVPVQIGQPDGTVIRPH---------------LGVNGI  200 (343)
T ss_dssp             ----CS------------------------------CCCEETTEECBEECTTSCEECCC---------------CCEEEE
T ss_pred             ----cc------------------------------cceeECCEEEEeccCCCceecee---------------ccccee
Confidence                00                              00012344555566677666553               125789


Q ss_pred             EECCCCCEEEEeeCCC-cEEEEeCC---CCe-----EEE--eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         467 EFSPDGRIIASASFDK-SIKLWDGR---IGK-----FIT--TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       467 ~~sp~g~~las~s~dg-~i~lwd~~---~~~-----~~~--~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      +|+|||+.|+.+..++ .+..++..   .+.     ...  ...++......++++++|.++++...++.|.+||..+++
T Consensus       201 a~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~  280 (343)
T 2qe8_A          201 VLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA  280 (343)
T ss_dssp             EECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred             EeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence            9999999888887666 44444421   110     000  011222234568999999999998889999999985554


Q ss_pred             cccccc-CcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671         536 IEQDLP-GHGDEVYAVDWAPDGEKVASGGKDKVL  568 (573)
Q Consensus       536 ~~~~l~-~h~~~v~~~~~s~d~~~l~s~~~d~~i  568 (573)
                      ...... .+.....+++|.++++.+++.+..+.+
T Consensus       281 ~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~  314 (343)
T 2qe8_A          281 YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS  314 (343)
T ss_dssp             EEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred             EEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence            322221 124568899999999887777654433

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.29  E-value=4.5e-09  Score=99.94  Aligned_cols=222  Identities=13%  Similarity=0.114  Sum_probs=144.2

Q ss_pred             EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671         295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~  374 (573)
                      ..+..|.|.    .+..+.+...++.|..||..++... .+ .....+.++++.+++.++.+. ++.|.+|+..++....
T Consensus        15 ~Egp~w~~~----~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~   87 (297)
T 3g4e_A           15 GESPVWEEV----SNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVV   87 (297)
T ss_dssp             EEEEEEETT----TTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEE
T ss_pred             ccCCeEECC----CCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEE
Confidence            345555541    3345666677889999998876542 22 234678999999888777766 5689999988776432


Q ss_pred             eccC----CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC-----------CC
Q psy2671         375 TLEG----HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD-----------DF  439 (573)
Q Consensus       375 ~~~~----~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~-----------dg  439 (573)
                      ....    ....++.+++.                                     |+|.+.++...           .+
T Consensus        88 ~~~~~~~~~~~~~~di~~d-------------------------------------~dG~l~~~~~~~~~~~~~~~~~~~  130 (297)
T 3g4e_A           88 LATVDNDKKNNRFNDGKVD-------------------------------------PAGRYFAGTMAEETAPAVLERHQG  130 (297)
T ss_dssp             EEECCTTCSSEEEEEEEEC-------------------------------------TTSCEEEEEEECCSBTTBCCTTCE
T ss_pred             EEecCCCCCCCCCCCEEEC-------------------------------------CCCCEEEecCCcccccccccCCCc
Confidence            2211    11123333333                                     44554443321           23


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeC--CCCeE-----EEeecCCcceEEEEEEC
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDG--RIGKF-----ITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~--~~~~~-----~~~~~~h~~~v~~v~~s  511 (573)
                      .+..++...  . ...+..+....+.++|+||++.| ++.+.++.|..||.  .++..     +..+..+......+++.
T Consensus       131 ~l~~~d~~g--~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d  207 (297)
T 3g4e_A          131 ALYSLFPDH--H-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID  207 (297)
T ss_dssp             EEEEECTTS--C-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred             EEEEEECCC--C-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence            444455432  1 12222233446889999999866 45566789999986  45542     22333344567889999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc-cCCCEEEEee
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA-PDGEKVASGG  563 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s-~d~~~l~s~~  563 (573)
                      ++|++.++....+.|..||..+++.+..+..+...+++++|. ||++.|..++
T Consensus       208 ~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~  260 (297)
T 3g4e_A          208 AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC  260 (297)
T ss_dssp             TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred             CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence            999888887778889999999888888777777789999998 8888775544

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.29  E-value=2.3e-10  Score=110.97  Aligned_cols=256  Identities=9%  Similarity=-0.014  Sum_probs=146.1

Q ss_pred             EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC--C-----CcEEEEEEcCCCCeEEEEee--CCe
Q psy2671         212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH--K-----HWVLCIAWSPDSKQLVSGCK--NGV  272 (573)
Q Consensus       212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h--~-----~~V~~v~~s~dg~~l~sgs~--dg~  272 (573)
                      .+.|+|||++++.+.          .+++|.+||..+++.+.++..+  .     ..-..++|+|||++|+++..  +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            689999999998886          3789999999999988876422  0     12356899999999998875  467


Q ss_pred             EEE--EECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC-----CeEEEE----ecCCCcc
Q psy2671         273 IHA--WDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL-----SQCVRV----LTSHTRS  341 (573)
Q Consensus       273 i~v--wd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~----~~~h~~~  341 (573)
                      +.+  +|+.+-+.+  ...+. .     ...|    ...+.+++.+.||.+.+.|+..     ++....    +.....+
T Consensus       149 v~V~~iD~~tv~~i--~v~~~-~-----~~~p----~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P  216 (368)
T 1mda_H          149 AGLSVPGASDDQLT--KSASC-F-----HIHP----GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA  216 (368)
T ss_dssp             EEEEETTTEEEEEE--ECSSC-C-----CCEE----EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred             EEEEEEchhhceEE--ECCCc-e-----EEcc----CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence            888  888661111  11110 0     0011    1123455556777777777665     221100    0000111


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .   .....+.++..+. +.+.+.|...+...                                                
T Consensus       217 ~---~~~~~~~~~~vs~-~~V~viD~~~~~~~------------------------------------------------  244 (368)
T 1mda_H          217 A---QANYPGMLVWAVA-SSILQGDIPAAGAT------------------------------------------------  244 (368)
T ss_dssp             E---EETTTTEEEECBS-SCCEEEECCSSCCE------------------------------------------------
T ss_pred             c---ccccCCEEEEEcC-CEEEEEECCCCcce------------------------------------------------
Confidence            1   1222222222222 44444333211000                                                


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC---------CCcEEEEeCCCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF---------DKSIKLWDGRIG  492 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~---------dg~i~lwd~~~~  492 (573)
                                        .+..|.+...........  ......++|+||++.+..+..         ++.+.++|..++
T Consensus       245 ------------------v~~~~~~~~~~~~~~~~~--p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~  304 (368)
T 1mda_H          245 ------------------MKAAIDGNESGRKADNFR--SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG  304 (368)
T ss_dssp             ------------------EECCCCSSCTHHHHTTEE--ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred             ------------------EEEEEEeccccccccccc--cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence                              000111110000000000  011112689999998876533         235669999999


Q ss_pred             eEEEeecCCcceEEEEEECCCCC-EEEEEe-CCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSR-LLVSGS-ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~-~las~s-~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                      +.+..+.... ....++|+|||+ ++++.. .++.|.++|+.+++.++.++.... -..+++.
T Consensus       305 ~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~  365 (368)
T 1mda_H          305 QTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQ  365 (368)
T ss_dssp             CEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECC
T ss_pred             eEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEee
Confidence            9888876543 578899999998 456666 599999999999999888875543 3455544

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.28  E-value=2.4e-10  Score=111.20  Aligned_cols=170  Identities=9%  Similarity=0.069  Sum_probs=129.7

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----------eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----------PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----------~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd  277 (573)
                      ++..+++++...++++|+.+ .+++|++....           +.... .+.. |+.|+|  |++.|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            68899999999999999998 56669864322           11222 3555 999999  89999998 899999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEe
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS  357 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s  357 (573)
                      +.+-... .....|+..+..+.+.+.       .++.++.||.+.+||+..+....    +...|+|++|++.| ++.|.
T Consensus       113 v~sl~~~-~~~~~~~~~v~~i~~~~p-------~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~vg~  179 (388)
T 1xip_A          113 LEELSEF-RTVTSFEKPVFQLKNVNN-------TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAVLL  179 (388)
T ss_dssp             SSSTTCE-EEEEECSSCEEEEEECSS-------EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEEEE
T ss_pred             chhhhcc-CccceeecceeeEEecCC-------CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEEEE
Confidence            8765432 234455666777665431       38889999999999998776643    34689999999999 78899


Q ss_pred             CCCeEEEEeCCCCee--eEec------c---CCcceeeEEEeccCceeEEE
Q psy2671         358 QDRTIKVWRASDGVM--CRTL------E---GHAHWVNTLALSTDYLMRVE  397 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~--~~~~------~---~~~~~v~~~~~s~~~~~~~~  397 (573)
                      .||++++|+...+..  ..++      .   +|...|.++.+..+..+.+.
T Consensus       180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            999999999887775  4444      3   47788999999888766554

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.28  E-value=5.5e-09  Score=99.37  Aligned_cols=227  Identities=10%  Similarity=0.065  Sum_probs=144.8

Q ss_pred             CCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEEC
Q psy2671         248 HKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV  326 (573)
Q Consensus       248 h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~  326 (573)
                      +...-.+..|+|++. .+++...++.|..||..++.....   .....+.++.+.+     +++++++ . ++.|.+||.
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~---~~~~~~~~i~~~~-----dG~l~v~-~-~~~l~~~d~   80 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV---TMDAPVSSVALRQ-----SGGYVAT-I-GTKFCALNW   80 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE---ECSSCEEEEEEBT-----TSSEEEE-E-TTEEEEEET
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE---eCCCceEEEEECC-----CCCEEEE-E-CCeEEEEEC
Confidence            334567889999655 455666789999999987754211   2234677787755     5564444 4 567999999


Q ss_pred             CCCeEEEEecC----CCccEEEEEECCCcEEEEEeCC----------CeEEEEeCCC-CeeeEeccCCcceeeEEEeccC
Q psy2671         327 ILSQCVRVLTS----HTRSVTCIRWGGSGLIYSASQD----------RTIKVWRASD-GVMCRTLEGHAHWVNTLALSTD  391 (573)
Q Consensus       327 ~~~~~~~~~~~----h~~~v~~~~~~~~~~l~s~s~d----------~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~s~~  391 (573)
                      .+++.......    ....+..+++.+++.++.++..          ..-.+|.+.. +.... +..+....+.++    
T Consensus        81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~----  155 (297)
T 3g4e_A           81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLD----  155 (297)
T ss_dssp             TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEE----
T ss_pred             CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceE----
Confidence            87765433221    2345788999988876665521          2334554432 22111 111111112222    


Q ss_pred             ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCC--CCcc----ceeeeccccccEE
Q psy2671         392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPE--KEKK----SLARMTGHQQLIN  464 (573)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~--~~~~----~~~~~~~h~~~v~  464 (573)
                                                       .+|+++.+ ++.+.++.|.+|++.  ++..    .+..+..+.....
T Consensus       156 ---------------------------------~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~  202 (297)
T 3g4e_A          156 ---------------------------------WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD  202 (297)
T ss_dssp             ---------------------------------ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred             ---------------------------------EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence                                             33566654 555667889999763  3221    1222233345578


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEEeC
Q psy2671         465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGSA  522 (573)
Q Consensus       465 ~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~s~  522 (573)
                      .++++++|++.++...++.|..||..+++.+..+..+...+++++|+ ||++.|+.++.
T Consensus       203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred             eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence            89999999988888888899999999999988888777789999998 88887765554

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.28  E-value=4.5e-10  Score=119.20  Aligned_cols=307  Identities=13%  Similarity=0.112  Sum_probs=185.0

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-----------EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-----------VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-----------V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      +..++.++.++.|.-+|..+++.+.+.......           ...+++  ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            456777778899999999999998877543210           112333  4568999999999999999999876543


Q ss_pred             ccC-CcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCcc-------------------
Q psy2671         288 MRG-HKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTRS-------------------  341 (573)
Q Consensus       288 ~~~-h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~~-------------------  341 (573)
                      ..+ .......+...|..   .+..++.++.      +|.|+.+|..+++.+..+......                   
T Consensus       155 ~~~~~~~~~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~  231 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP  231 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred             cCCcCcCcCcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence            221 10000000011111   1234444432      789999999999887655432110                   


Q ss_pred             -------------EEEEEECC-CcEEEEEeCCC-------------------eEEEEeCCCCeeeEeccC--CcceeeEE
Q psy2671         342 -------------VTCIRWGG-SGLIYSASQDR-------------------TIKVWRASDGVMCRTLEG--HAHWVNTL  386 (573)
Q Consensus       342 -------------v~~~~~~~-~~~l~s~s~d~-------------------~i~vw~~~~~~~~~~~~~--~~~~v~~~  386 (573)
                                   ...+.+.+ .+.++.++.++                   +|..+|..+|+..-.++.  |..+-...
T Consensus       232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~  311 (677)
T 1kb0_A          232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS  311 (677)
T ss_dssp             GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred             cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence                         01344443 35777776654                   477778777766543322  21110000


Q ss_pred             EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeeccc----
Q psy2671         387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTGH----  459 (573)
Q Consensus       387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h----  459 (573)
                      .  .. ...                           .....+|   ..++.++.+|.++++|..+++.........    
T Consensus       312 ~--~~-p~l---------------------------~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~  361 (677)
T 1kb0_A          312 T--QP-MIL---------------------------ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA  361 (677)
T ss_dssp             C--SC-CEE---------------------------EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred             C--CC-cEE---------------------------EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence            0  00 000                           0000134   578888999999999988765432211110    


Q ss_pred             ------cccE------------------------EEEEECCCCCEEEEeeC-----------------------------
Q psy2671         460 ------QQLI------------------------NCVEFSPDGRIIASASF-----------------------------  480 (573)
Q Consensus       460 ------~~~v------------------------~~v~~sp~g~~las~s~-----------------------------  480 (573)
                            ...+                        ..++|+|++.++.+...                             
T Consensus       362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  441 (677)
T 1kb0_A          362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN  441 (677)
T ss_dssp             EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred             cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence                  0001                        14689999888877543                             


Q ss_pred             --------------CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcC-C
Q psy2671         481 --------------DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG-D  545 (573)
Q Consensus       481 --------------dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~-~  545 (573)
                                    .|.|..||+.+++.+..++.. ..++...++.++.+++.++.|+.+++||.++++.+..+.-.. .
T Consensus       442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~  520 (677)
T 1kb0_A          442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGV  520 (677)
T ss_dssp             CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred             cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCc
Confidence                          278999999999988776532 233444566778889999999999999999999887665322 2


Q ss_pred             CEEEEEEccCCCEEEE
Q psy2671         546 EVYAVDWAPDGEKVAS  561 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s  561 (573)
                      ...-+.|..+|+.++.
T Consensus       521 ~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          521 VAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             CSCCEEEEETTEEEEE
T ss_pred             ccCCEEEEeCCEEEEE
Confidence            2234567788875543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.23  E-value=4.1e-10  Score=120.58  Aligned_cols=102  Identities=13%  Similarity=0.091  Sum_probs=64.8

Q ss_pred             ECCCCCEEE-EeeC---CCcEEEEeCCCCeE--EEeecCCcceEEEEEECCCCCEEEEEeCCC---cEEEEeCCcccccc
Q psy2671         468 FSPDGRIIA-SASF---DKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADS---TLKVWNMKTKKIEQ  538 (573)
Q Consensus       468 ~sp~g~~la-s~s~---dg~i~lwd~~~~~~--~~~~~~h~~~v~~v~~s~dg~~las~s~D~---~v~vwd~~~~~~~~  538 (573)
                      ++++|..|+ .+..   .+.|..+|+.++..  ...+..|...+.  .|++++++|+....++   .|++|++.++.. +
T Consensus       287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~  363 (693)
T 3iuj_A          287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-R  363 (693)
T ss_dssp             EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-E
T ss_pred             EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-E
Confidence            455555444 3333   36788899887643  234545555554  8999999887766544   689999876543 3


Q ss_pred             ccc-CcCCCEEEEEEccCCCEEEEeeCC----CcEEEcc
Q psy2671         539 DLP-GHGDEVYAVDWAPDGEKVASGGKD----KVLRLWQ  572 (573)
Q Consensus       539 ~l~-~h~~~v~~~~~s~d~~~l~s~~~d----~~i~iw~  572 (573)
                      .+. .+.+.+..+.++++++.|+....+    ++++.|+
T Consensus       364 ~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d  402 (693)
T 3iuj_A          364 EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE  402 (693)
T ss_dssp             EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred             EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence            332 234567788888888877655443    5676664

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.22  E-value=1.9e-08  Score=96.97  Aligned_cols=209  Identities=11%  Similarity=0.068  Sum_probs=133.8

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccC---C-cceeeE
Q psy2671         310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG---H-AHWVNT  385 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~---~-~~~v~~  385 (573)
                      ..+.+...++.|..||...++... +. ....+.++++.+++.++.++.+ .|.+|+..++........   . ...++.
T Consensus        62 ~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~  138 (326)
T 2ghs_A           62 TAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSND  138 (326)
T ss_dssp             EEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEE
T ss_pred             EEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCC
Confidence            456666678899999988765432 22 2457899999888877777654 488999877764322111   0 112333


Q ss_pred             EEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC------CCeEEEEcCCCCccceeeeccc
Q psy2671         386 LALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD------DFTLFLWNPEKEKKSLARMTGH  459 (573)
Q Consensus       386 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~lwd~~~~~~~~~~~~~h  459 (573)
                      ++++                                     |+|.+.++...      .+.|..++  ++ . ...+..+
T Consensus       139 i~~d-------------------------------------~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~-~~~~~~~  177 (326)
T 2ghs_A          139 GRMH-------------------------------------PSGALWIGTMGRKAETGAGSIYHVA--KG-K-VTKLFAD  177 (326)
T ss_dssp             EEEC-------------------------------------TTSCEEEEEEETTCCTTCEEEEEEE--TT-E-EEEEEEE
T ss_pred             EEEC-------------------------------------CCCCEEEEeCCCcCCCCceEEEEEe--CC-c-EEEeeCC
Confidence            3333                                     44555444332      24455555  22 1 2222223


Q ss_pred             cccEEEEEECCCCCEEEEe-eCCCcEEEEeCC--CC-e-----EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         460 QQLINCVEFSPDGRIIASA-SFDKSIKLWDGR--IG-K-----FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       460 ~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~--~~-~-----~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ....+.++|+|||+.|+.+ +.++.|.+||..  ++ +     .+..+.........+++.++|.+.++...++.|..|+
T Consensus       178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d  257 (326)
T 2ghs_A          178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD  257 (326)
T ss_dssp             ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred             CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence            3456789999999876544 567899999975  55 3     2333333445567899999998887776778899999


Q ss_pred             CCcccccccccCcCCCEEEEEEc-cCCCEEEEee
Q psy2671         531 MKTKKIEQDLPGHGDEVYAVDWA-PDGEKVASGG  563 (573)
Q Consensus       531 ~~~~~~~~~l~~h~~~v~~~~~s-~d~~~l~s~~  563 (573)
                      . +++.+..+..+...+.+++|+ ++++.|..++
T Consensus       258 ~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~  290 (326)
T 2ghs_A          258 T-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS  290 (326)
T ss_dssp             T-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred             C-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence            8 566666666666679999998 8888775443

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.22  E-value=1.3e-09  Score=105.98  Aligned_cols=267  Identities=13%  Similarity=0.062  Sum_probs=159.9

Q ss_pred             CcEEEEEEcCCCCeEEEEe--CCCeEEEEECCCCeeeE------EecCCCCcEEEEEEcCCCCeEEEEee-----CCeEE
Q psy2671         208 EAVISVKFSPNGRSLASGS--GDTTVRFWDVTTQTPLF------KCEGHKHWVLCIAWSPDSKQLVSGCK-----NGVIH  274 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s--~d~~i~iwd~~~~~~~~------~~~~h~~~V~~v~~s~dg~~l~sgs~-----dg~i~  274 (573)
                      ..+..++++|+|+.+++..  .++.++||.+.+++...      ...+|...+.+++|+++|+.+++-..     ++.|.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~   96 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV   96 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence            5688999999999888864  23435666654554320      11235567999999999876555443     57899


Q ss_pred             EEECCCCceeccc-c----cCCcccEEEEEecccccCCCCCEEEEEe---CCCcEEEEECCCCeEEEEecCCCccEE-EE
Q psy2671         275 AWDSSTGKQIGQP-M----RGHKQWITALSWEPFHLNHQCRRFASSG---KDGAIRIWDVILSQCVRVLTSHTRSVT-CI  345 (573)
Q Consensus       275 vwd~~~~~~~~~~-~----~~h~~~v~~~~~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~-~~  345 (573)
                      +||+.+++.+... +    ..+...+..+++.+.    .+..+++..   .++.|.+||+.+++..+.+.+|..... ..
T Consensus        97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~----~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~  172 (343)
T 2qe8_A           97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI----HNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI  172 (343)
T ss_dssp             EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT----TTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred             EEECCCCeEEEEEECChhhcccccccceEEEecC----CCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence            9999988743221 1    112234456665541    234456655   688999999988887777665432110 01


Q ss_pred             EECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         346 RWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       346 ~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      .+..++ .+++.+.+++++.|..              .++.++++                                   
T Consensus       173 ~~~~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s-----------------------------------  203 (343)
T 2qe8_A          173 DLVIDGVPVQIGQPDGTVIRPHL--------------GVNGIVLD-----------------------------------  203 (343)
T ss_dssp             CCEETTEECBEECTTSCEECCCC--------------CEEEEEEC-----------------------------------
T ss_pred             ceeECCEEEEeccCCCceeceec--------------ccceeEec-----------------------------------
Confidence            111223 3445566676665531              12344444                                   


Q ss_pred             eCCCCcEEEEEeCCC-eEEEEcCC---CC----cccee--eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE
Q psy2671         425 QCPEGEKLVSGSDDF-TLFLWNPE---KE----KKSLA--RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF  494 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg-~i~lwd~~---~~----~~~~~--~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~  494 (573)
                        |+++.|..+..++ .+..++..   ..    .....  ...++......++++++|+++++...++.|.+||..+++.
T Consensus       204 --~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~  281 (343)
T 2qe8_A          204 --AENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAY  281 (343)
T ss_dssp             --TTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEE
T ss_pred             --cCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCE
Confidence              4455555555444 44444321   00    00000  1112233455789999999999999999999999866764


Q ss_pred             EEeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEE
Q psy2671         495 ITTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVW  529 (573)
Q Consensus       495 ~~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vw  529 (573)
                      ...... +......++|.++|+++++.+..+.+.+|
T Consensus       282 ~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          282 KLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL  317 (343)
T ss_dssp             EEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred             EEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence            333322 24568899999999988887765544433

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.20  E-value=1.1e-08  Score=101.64  Aligned_cols=250  Identities=12%  Similarity=0.095  Sum_probs=151.4

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC--eEEEEECCCCcee
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG--VIHAWDSSTGKQI  284 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg--~i~vwd~~~~~~~  284 (573)
                      -.....++|+|+|+.+++...++.|+.||..++............ . ++|+|+++.|+++..++  .|.+|+...+...
T Consensus       130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~-~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~  207 (409)
T 3hrp_A          130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG-K-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP  207 (409)
T ss_dssp             CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC-B-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred             cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC-c-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence            346789999999998788778899999999887655444433322 3 89999999999888866  7999987655431


Q ss_pred             ccc--c-cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE----ecCCCccE--EEEEECC-CcEEE
Q psy2671         285 GQP--M-RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV----LTSHTRSV--TCIRWGG-SGLIY  354 (573)
Q Consensus       285 ~~~--~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~h~~~v--~~~~~~~-~~~l~  354 (573)
                      ...  . ......+.++++.|     +...|..+..++.|+.||...+.....    ..++...-  ..+++++ ++.++
T Consensus       208 ~~~g~~~~~~~~~p~~iav~p-----~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly  282 (409)
T 3hrp_A          208 TRIGQLGSTFSGKIGAVALDE-----TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY  282 (409)
T ss_dssp             EEEEECCTTSCSCCCBCEECT-----TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred             EEeeeccchhcCCcEEEEEeC-----CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence            111  0 11223445555544     223444467788999999887653332    22222222  2889987 46555


Q ss_pred             EE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE
Q psy2671         355 SA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV  433 (573)
Q Consensus       355 s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  433 (573)
                      .+ ...+.|..|+....  ...+.++..                   ...+  ... ...........-.+..++|.+++
T Consensus       283 v~d~~~~~I~~~~~~g~--~~~~~g~~~-------------------~~g~--~dg-~~~~~~~~~P~gia~d~dG~lyv  338 (409)
T 3hrp_A          283 MSDQNLSSVYKITPDGE--CEWFCGSAT-------------------QKTV--QDG-LREEALFAQPNGMTVDEDGNFYI  338 (409)
T ss_dssp             EEETTTTEEEEECTTCC--EEEEEECTT-------------------CCSC--BCE-EGGGCBCSSEEEEEECTTCCEEE
T ss_pred             EEeCCCCEEEEEecCCC--EEEEEeCCC-------------------CCCc--CCC-cccccEeCCCeEEEEeCCCCEEE
Confidence            44 56788998886533  212211110                   0000  000 00000000011223457788777


Q ss_pred             EEe-CCCeEEEEcCCCCccceeeeccc---------------cccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671         434 SGS-DDFTLFLWNPEKEKKSLARMTGH---------------QQLINCVEFSPDGRIIASASFDKSIKLWDG  489 (573)
Q Consensus       434 sg~-~dg~i~lwd~~~~~~~~~~~~~h---------------~~~v~~v~~sp~g~~las~s~dg~i~lwd~  489 (573)
                      +-. .++.|+.|++.++.  +..+.++               -.....|+++|+|.++++-..++.|+.+++
T Consensus       339 ad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          339 VDGFKGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             EETTTTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             EeCCCCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            877 88899999965443  2333332               234789999999988888888888887753

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.17  E-value=9.5e-09  Score=101.35  Aligned_cols=246  Identities=13%  Similarity=0.087  Sum_probs=146.8

Q ss_pred             EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCC-------CCcEEEEEEcCCCCeEEEEee--CCe
Q psy2671         212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGH-------KHWVLCIAWSPDSKQLVSGCK--NGV  272 (573)
Q Consensus       212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~~V~~v~~s~dg~~l~sgs~--dg~  272 (573)
                      .++++|||++|+.+.          .++.|.++|..+++.+..+.-.       ...-..++|+|||++|+++..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            689999999888775          4679999999998877665311       112346799999999998874  578


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE----ecCCCccE-EEEEE
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV----LTSHTRSV-TCIRW  347 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~----~~~h~~~v-~~~~~  347 (573)
                      |.+.|+.+++.+.....+..     ....|.    ..+.+++.+.||.+.+.+...++....    +.....++ ..+.+
T Consensus       202 VsVID~~t~kvv~~I~v~g~-----~~~~p~----g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~  272 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPDC-----YHIFPA----SPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAF  272 (426)
T ss_dssp             EEEEETTTTEEEEEEECCSE-----EEEEEE----ETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEE
T ss_pred             EEEEECCCCeEEEEEEcCCc-----eeeccC----CCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeee
Confidence            99999998876543221111     011111    124567777888888888755443321    11111111 12234


Q ss_pred             CCCc-EEEEEeCCCeEEEEeCCCCeeeE--eccC---CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         348 GGSG-LIYSASQDRTIKVWRASDGVMCR--TLEG---HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       348 ~~~~-~l~s~s~d~~i~vw~~~~~~~~~--~~~~---~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .+++ .++..+..+.+.+.|...+....  .+.-   ....+.                     +.+.         ...
T Consensus       273 ~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g---------------------~~p~---------g~~  322 (426)
T 3c75_H          273 SLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD---------------------WRPG---------GWQ  322 (426)
T ss_dssp             CTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT---------------------EEEC---------SSS
T ss_pred             cCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc---------------------cccC---------Cce
Confidence            4443 45555667888888875443210  0000   000000                     0000         000


Q ss_pred             eeeeCCCCcEEEEEeC----------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCC-EEEEee-CCCcEEEEeC
Q psy2671         422 YQAQCPEGEKLVSGSD----------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR-IIASAS-FDKSIKLWDG  489 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~----------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~-~las~s-~dg~i~lwd~  489 (573)
                      ....+|++.++.....          +++|.++|+.+.+. +.++.- ......++|+|||+ +++++. .++.|.++|.
T Consensus       323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~  400 (426)
T 3c75_H          323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDA  400 (426)
T ss_dssp             CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred             eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEEC
Confidence            0122355555544431          35799999887654 333321 12367899999999 888887 5999999999


Q ss_pred             CCCeEEEee
Q psy2671         490 RIGKFITTL  498 (573)
Q Consensus       490 ~~~~~~~~~  498 (573)
                      .+++.+.++
T Consensus       401 ~t~kvv~tI  409 (426)
T 3c75_H          401 ATGEELRSV  409 (426)
T ss_dssp             TTCCEEEEE
T ss_pred             CCCCEEEEe
Confidence            999988886

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.15  E-value=1.9e-06  Score=93.86  Aligned_cols=347  Identities=10%  Similarity=0.091  Sum_probs=201.1

Q ss_pred             EEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCC-CCc-EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         210 VISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH-KHW-VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       210 V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h-~~~-V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      |.++...++|...+. +. +.+..||..+++......++ ... |.++...+++. |..|+.++-+..|+..+++.....
T Consensus       133 i~~i~~d~~g~lwi~-t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~  209 (795)
T 4a2l_A          133 VNGIEEISPEQLLIS-TP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVI  209 (795)
T ss_dssp             CCEEEEEETTEEEEE-ET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC
T ss_pred             EEEEEECCCCCEEEE-EC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEec
Confidence            777888888875554 44 45888998765432111111 112 88888888876 445666555888998776543211


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC-------CCccEEEEEECCCcEEEEEeCCC
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS-------HTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      .......|.++...+     ++ .+..++.++-+..||..+++.......       ....|.++....++.++.|+.+ 
T Consensus       210 ~~~~~~~i~~i~~d~-----~g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-  282 (795)
T 4a2l_A          210 PILGTKQIQAILQQS-----PT-RIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-  282 (795)
T ss_dssp             ----CCCEEEEEEEE-----TT-EEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-
T ss_pred             CCCCCCeeEEEEEcC-----CC-CEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-
Confidence            112234566665432     33 344455554588899877655443221       2356999999888989988877 


Q ss_pred             eEEEEeCCCCeeeEeccC-------CcceeeEEEeccCceeEEEEcCCCceeeCCCCchh------hhhhhh--hhee--
Q psy2671         361 TIKVWRASDGVMCRTLEG-------HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE------SSKHAL--AKYQ--  423 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~~~--  423 (573)
                      -|.+|+..++........       ....|.++....+..+=+.....+-..+++....-      .....+  ....  
T Consensus       283 Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i  362 (795)
T 4a2l_A          283 DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCI  362 (795)
T ss_dssp             CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEE
T ss_pred             hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEE
Confidence            588899877755432211       22457777766665444443333333332211000      000000  0011  


Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-------cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-------GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-------~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                      ...++| .|-.|+.++-+..|+..+.........       -....|.++...++|++|..|+.++-+..||..+++...
T Consensus       363 ~~d~~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~  441 (795)
T 4a2l_A          363 VEDKDK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN  441 (795)
T ss_dssp             EECTTS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred             EECCCC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE
Confidence            112333 456677777788898765432111100       113568999999999856677887789999988876433


Q ss_pred             eec----CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc------CcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         497 TLR----GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP------GHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       497 ~~~----~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~------~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      -..    .+...|.++...++|.+.+.. . +.+..||..+++......      -....|.++...++|+..+... .|
T Consensus       442 ~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G  518 (795)
T 4a2l_A          442 FNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG  518 (795)
T ss_dssp             ECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred             eecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence            221    123578999999888866544 3 458899987765432211      1235789999888887655443 44


Q ss_pred             cEEEc
Q psy2671         567 VLRLW  571 (573)
Q Consensus       567 ~i~iw  571 (573)
                       |..|
T Consensus       519 -l~~~  522 (795)
T 4a2l_A          519 -LSVF  522 (795)
T ss_dssp             -EEEE
T ss_pred             -eEEE
Confidence             4444

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.13  E-value=5e-08  Score=94.04  Aligned_cols=223  Identities=13%  Similarity=0.101  Sum_probs=138.0

Q ss_pred             EEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe
Q psy2671         252 VLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ  330 (573)
Q Consensus       252 V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  330 (573)
                      ..+.+|+|++. .+++...++.|..||..+++.....   ....+.++.|.|     +++.+++ +.+ .|.+||..+++
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~---~~~~v~~i~~~~-----dg~l~v~-~~~-gl~~~d~~~g~  120 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA---LPFMGSALAKIS-----DSKQLIA-SDD-GLFLRDTATGV  120 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE---CSSCEEEEEEEE-----TTEEEEE-ETT-EEEEEETTTCC
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE---CCCcceEEEEeC-----CCeEEEE-ECC-CEEEEECCCCc
Confidence            46778999755 4556667889999999877542111   234678887765     4555554 444 49999987776


Q ss_pred             EEEEecC----CCccEEEEEECCCcEEEEEeCC-----CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         331 CVRVLTS----HTRSVTCIRWGGSGLIYSASQD-----RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       331 ~~~~~~~----h~~~v~~~~~~~~~~l~s~s~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      .......    ....+..+++.+++.++.++.+     ....+|.+.++.... +..+....+.++              
T Consensus       121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~-~~~~~~~~~~i~--------------  185 (326)
T 2ghs_A          121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTK-LFADISIPNSIC--------------  185 (326)
T ss_dssp             EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEE-EEEEESSEEEEE--------------
T ss_pred             EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcEEE-eeCCCcccCCeE--------------
Confidence            5433221    1246888999988866665532     223344332333221 111111112222              


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEE-EEEeCCCeEEEEcCC--CC-c----cceeeeccccccEEEEEECCCCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKL-VSGSDDFTLFLWNPE--KE-K----KSLARMTGHQQLINCVEFSPDGR  473 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~sg~~dg~i~lwd~~--~~-~----~~~~~~~~h~~~v~~v~~sp~g~  473 (573)
                                             .+|+++.+ ++.+.++.|.+|++.  ++ .    ..+..+.........++++++|+
T Consensus       186 -----------------------~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~  242 (326)
T 2ghs_A          186 -----------------------FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH  242 (326)
T ss_dssp             -----------------------ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred             -----------------------EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence                                   23567655 444567889999875  33 1    11222222334567899999999


Q ss_pred             EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEEeCC
Q psy2671         474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSGSAD  523 (573)
Q Consensus       474 ~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~s~D  523 (573)
                      +.++...++.|..||. .++.+..+..+...+++++|+ ++++.|+.++..
T Consensus       243 lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~  292 (326)
T 2ghs_A          243 IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR  292 (326)
T ss_dssp             EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred             EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence            8887777789999998 577777777666679999998 888877555443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.13  E-value=1.8e-09  Score=104.43  Aligned_cols=294  Identities=12%  Similarity=0.072  Sum_probs=178.1

Q ss_pred             EcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCccc
Q psy2671         215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQW  294 (573)
Q Consensus       215 fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~  294 (573)
                      +..+| .+..++.++.|..|| .+++.+.....+...+.++...++|. |..++.+  +..+|. +++.+... ......
T Consensus        27 ~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~-~~~~~~   99 (330)
T 3hxj_A           27 LAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF-DTKKAI   99 (330)
T ss_dssp             ECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS-CC----
T ss_pred             EccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE-ECCCCc
Confidence            44455 466677788899999 88877666554445567777777775 5555555  888886 55543221 111111


Q ss_pred             EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeE
Q psy2671         295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCR  374 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~  374 (573)
                      ......       ....+..++.++.+..+|.. ++.......+...+.++...+++.++.++.++.|..++.. +....
T Consensus       100 ~~~~~~-------~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~  170 (330)
T 3hxj_A          100 VSDFTI-------FEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKW  170 (330)
T ss_dssp             -CCEEE-------ETTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEE
T ss_pred             ccCceE-------ECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeE
Confidence            111111       13457777888999999988 6665555555555566666777889999999999999987 65543


Q ss_pred             eccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcccee
Q psy2671         375 TLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLA  454 (573)
Q Consensus       375 ~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~  454 (573)
                      ........+..+.                                     ..+++. +..++  +.+..+| .++.. ..
T Consensus       171 ~~~~~~~~~~~~~-------------------------------------~d~~g~-l~v~t--~~l~~~d-~~g~~-~~  208 (330)
T 3hxj_A          171 RFKTNDAITSAAS-------------------------------------IGKDGT-IYFGS--DKVYAIN-PDGTE-KW  208 (330)
T ss_dssp             EEECSSCCCSCCE-------------------------------------ECTTCC-EEEES--SSEEEEC-TTSCE-EE
T ss_pred             EEecCCCceeeeE-------------------------------------EcCCCE-EEEEe--CEEEEEC-CCCcE-EE
Confidence            3322111111111                                     112344 34444  7788888 44332 22


Q ss_pred             eeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       455 ~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                      ........+.++.++++|.+.+ ++.++.+..+|. +++.+..+......+..+.+.+++ .|..++.++.|..+|. ++
T Consensus       209 ~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g  284 (330)
T 3hxj_A          209 NFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG  284 (330)
T ss_dssp             EECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS
T ss_pred             EEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC
Confidence            3333335577888888886554 666788888884 555555554333333445555566 4556778888999996 56


Q ss_pred             cccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         535 KIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       535 ~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      +....+......+.++...++++ |..++.+|.+++.
T Consensus       285 ~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~  320 (330)
T 3hxj_A          285 TEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYAL  320 (330)
T ss_dssp             CEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred             cEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEE
Confidence            55444433344566677767775 5668889988764

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.12  E-value=1.7e-08  Score=107.35  Aligned_cols=286  Identities=15%  Similarity=0.198  Sum_probs=155.1

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCC--CCcEEEEEEcC---CCCeEEEEe------eCCeEEEEECCCCceeccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGH--KHWVLCIAWSP---DSKQLVSGC------KNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h--~~~V~~v~~s~---dg~~l~sgs------~dg~i~vwd~~~~~~~~~~  287 (573)
                      +..++.++.|+.|..+|..+++.+......  ......+..+|   ++ .++.++      .+|.|..||..+|+.+...
T Consensus       121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~  199 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRF  199 (689)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence            457888889999999999999988776542  11111111122   44 455544      3789999999999876432


Q ss_pred             cc--CCccc-----------------------EEEEEecccccCCCCCEEEEEeCCC-------------------cEEE
Q psy2671         288 MR--GHKQW-----------------------ITALSWEPFHLNHQCRRFASSGKDG-------------------AIRI  323 (573)
Q Consensus       288 ~~--~h~~~-----------------------v~~~~~~~~~~~~~~~~l~s~~~dg-------------------~v~i  323 (573)
                      ..  +....                       -....|.+..+++..+++..+..++                   .|..
T Consensus       200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A  279 (689)
T 1yiq_A          200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA  279 (689)
T ss_dssp             ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred             cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence            11  00000                       0011121222223445666666665                   3999


Q ss_pred             EECCCCeEEEEecC--CC-------ccEE--EEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCC-cceeeEEEec
Q psy2671         324 WDVILSQCVRVLTS--HT-------RSVT--CIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGH-AHWVNTLALS  389 (573)
Q Consensus       324 wd~~~~~~~~~~~~--h~-------~~v~--~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s  389 (573)
                      +|..+++.+..+..  |.       ....  .+.+.+.  ..++.++.+|.+.++|..+|+.+....-. ..|...+...
T Consensus       280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~  359 (689)
T 1yiq_A          280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK  359 (689)
T ss_dssp             EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred             EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence            99999988776543  32       1111  2222221  25888999999999999999876433211 1121111100


Q ss_pred             cCce---------------eEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe------------------
Q psy2671         390 TDYL---------------MRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS------------------  436 (573)
Q Consensus       390 ~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~------------------  436 (573)
                      ....               ..+.....+...|..              .+..|...++.+..                  
T Consensus       360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~--------------~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~  425 (689)
T 1yiq_A          360 TGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQP--------------MSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNP  425 (689)
T ss_dssp             TTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSC--------------CEEETTTTEEEEEEEECCEEEECCSSCCCCCS
T ss_pred             CCCcccchhhccccCCCCeeEeCCCcccccCCCc--------------ceECCCCCEEEEeccccceeeeeccccccccc
Confidence            0000               000000000000000              01112222222111                  


Q ss_pred             ---------------------------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeC
Q psy2671         437 ---------------------------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG  489 (573)
Q Consensus       437 ---------------------------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~  489 (573)
                                                 .+|.++.||+.+++..-.. ..+ ..+..-.++..+.+++.|+.||.++.||.
T Consensus       426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~-~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~  503 (689)
T 1yiq_A          426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEV-PYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAA  503 (689)
T ss_dssp             CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEE-EES-SSCCCCEEEETTTEEEEECTTSEEEEEET
T ss_pred             cccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEc-cCC-CCccCccceECCCEEEEECCCCcEEEEEC
Confidence                                       2478999999887643332 222 22233355567789999999999999999


Q ss_pred             CCCeEEEeecCCcce-EEEEEECCCCC-EEEEEe
Q psy2671         490 RIGKFITTLRGHVQA-VYMVAWSSDSR-LLVSGS  521 (573)
Q Consensus       490 ~~~~~~~~~~~h~~~-v~~v~~s~dg~-~las~s  521 (573)
                      ++|+.+..++..... ..-+.|+.||+ ++++.+
T Consensus       504 ~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~  537 (689)
T 1yiq_A          504 DTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFMA  537 (689)
T ss_dssp             TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             CCCccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence            999999887644221 12356677887 444443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.11  E-value=5.2e-06  Score=90.38  Aligned_cols=310  Identities=9%  Similarity=0.091  Sum_probs=189.0

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC-------CCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-------HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~-------h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ...|.++...++|.+.+ |+.++-+.+||..+++.......       ....|.++...++|. |..|+.+| |.+|+..
T Consensus       214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~  290 (795)
T 4a2l_A          214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNR-LWIGTFND-LNIYHEG  290 (795)
T ss_dssp             CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSC-EEEEESSC-EEEEETT
T ss_pred             CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCC-EEEEeCCh-hheEcCC
Confidence            34688888888876544 44444588899877654322211       235699999998887 44555554 7889987


Q ss_pred             CCceeccc------ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec------CCCccEEEEEE
Q psy2671         280 TGKQIGQP------MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT------SHTRSVTCIRW  347 (573)
Q Consensus       280 ~~~~~~~~------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------~h~~~v~~~~~  347 (573)
                      ++......      ..-....|.++...+     ++ .+-.|+.++-|..|+...........      .....|.++..
T Consensus       291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-----~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~  364 (795)
T 4a2l_A          291 TDSFASYSSNPVENGSLSQRSVRSIFMDS-----QG-GMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE  364 (795)
T ss_dssp             TTEEEEECCCTTSTTSCSSSCEEEEEECT-----TS-CEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred             CCeEEEEecCCCCCCCCCCCcEEEEEEeC-----Cc-CEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence            66432111      011234577776543     33 35567777778888865543222111      12356899999


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEeccCC--------cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGH--------AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~--------~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      ..++.++.|+.++-|..|+..++.........        ...|.+++.                               
T Consensus       365 d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~-------------------------------  413 (795)
T 4a2l_A          365 DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV-------------------------------  413 (795)
T ss_dssp             CTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE-------------------------------
T ss_pred             CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE-------------------------------
Confidence            88899999999988999998766443221110        111222221                               


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-----cccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-----GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF  494 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-----~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~  494 (573)
                            .+++..|..|+.++-+..||..++..  ..+.     .....|.++...++|.+.+.. .+ .+..||..+++.
T Consensus       414 ------d~~g~~lWigt~~~Gl~~~d~~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~  483 (795)
T 4a2l_A          414 ------DEKKSLVYIGTHAGGLSILHRNSGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSF  483 (795)
T ss_dssp             ------ETTTTEEEEEETTTEEEEEETTTCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEE
T ss_pred             ------cCCCCEEEEEeCcCceeEEeCCCCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeE
Confidence                  13355366777777788888765432  1111     123569999999998876654 44 588899888764


Q ss_pred             EEeecC------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc------cCcCCCEEEEEEccCCCEEEEe
Q psy2671         495 ITTLRG------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL------PGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       495 ~~~~~~------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l------~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      ......      +...|.++...++|++.+...  +.+..|+..+++. ...      ......|.++...++|+..++.
T Consensus       484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT  560 (795)
T 4a2l_A          484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT  560 (795)
T ss_dssp             EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred             EEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence            332211      235689999999998766443  5688898876554 100      1134579999988888755543


Q ss_pred             eCCCcEEEc
Q psy2671         563 GKDKVLRLW  571 (573)
Q Consensus       563 ~~d~~i~iw  571 (573)
                      . .| |..|
T Consensus       561 ~-~G-l~~~  567 (795)
T 4a2l_A          561 R-EG-FYCF  567 (795)
T ss_dssp             S-SC-EEEE
T ss_pred             C-CC-ceeE
Confidence            3 34 4444

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.07  E-value=2.8e-08  Score=94.80  Aligned_cols=233  Identities=12%  Similarity=0.100  Sum_probs=138.0

Q ss_pred             EEecCCCCcEEEEEEcCCCC-eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcE
Q psy2671         243 FKCEGHKHWVLCIAWSPDSK-QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI  321 (573)
Q Consensus       243 ~~~~~h~~~V~~v~~s~dg~-~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v  321 (573)
                      ..+..........+|+|+|+ .++++..++.|..|+.. +..  ..+..+...+.++.+.+     +++.+++...++.|
T Consensus        38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~--~~~~~~~~~~~gl~~d~-----dG~l~v~~~~~~~v  109 (305)
T 3dr2_A           38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV--DVLLDATAFTNGNAVDA-----QQRLVHCEHGRRAI  109 (305)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE--EEEEESCSCEEEEEECT-----TSCEEEEETTTTEE
T ss_pred             EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE--EEEeCCCCccceeeECC-----CCCEEEEECCCCEE
Confidence            33444455678899999998 55677778999999984 432  12233445567777654     56666655556789


Q ss_pred             EEEECCCCeEEEEecCC----CccEEEEEECCCcEEEE-----EeC-------------CCeEEEEeCCCCeeeEeccCC
Q psy2671         322 RIWDVILSQCVRVLTSH----TRSVTCIRWGGSGLIYS-----ASQ-------------DRTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       322 ~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~~l~s-----~s~-------------d~~i~vw~~~~~~~~~~~~~~  379 (573)
                      ..|+.. ++........    ...+..+++.++|.++.     |..             .+.|..++..++......  .
T Consensus       110 ~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~  186 (305)
T 3dr2_A          110 TRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D  186 (305)
T ss_dssp             EEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E
T ss_pred             EEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c
Confidence            999875 4432221111    12356788888886665     322             234555555444332211  1


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC------CeEEEEcCCCCccce
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD------FTLFLWNPEKEKKSL  453 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d------g~i~lwd~~~~~~~~  453 (573)
                      ....+.++                                     .+|+++.|..+...      +.|+.|++......-
T Consensus       187 ~~~p~gl~-------------------------------------~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~  229 (305)
T 3dr2_A          187 LDHPNGLA-------------------------------------FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHD  229 (305)
T ss_dssp             ESSEEEEE-------------------------------------ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEE
T ss_pred             CCCCcceE-------------------------------------EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccC
Confidence            11122223                                     34666666555544      678888875432100


Q ss_pred             -eee-ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEE
Q psy2671         454 -ARM-TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLK  527 (573)
Q Consensus       454 -~~~-~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~  527 (573)
                       ..+ .........++++++|++.++. .+ .|.+||. .++.+..+..+. .+..++|+++++.|..++.++..+
T Consensus       230 ~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~  301 (305)
T 3dr2_A          230 RRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM  301 (305)
T ss_dssp             EEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred             CeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence             011 1112234568999999955544 44 4999998 566777666554 578899999999888887764433

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.06  E-value=4.5e-08  Score=93.40  Aligned_cols=226  Identities=16%  Similarity=0.156  Sum_probs=138.6

Q ss_pred             ccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC-CCeEEEEeCCCC
Q psy2671         293 QWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ-DRTIKVWRASDG  370 (573)
Q Consensus       293 ~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-d~~i~vw~~~~~  370 (573)
                      .+..+..|.|     +++ .+.+...++.|..|+. .++ ...+..+...+..+++.+++.++.+.. ++.|..|+.. +
T Consensus        45 ~~~egp~~~~-----~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g  116 (305)
T 3dr2_A           45 TWSEGPAWWE-----AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G  116 (305)
T ss_dssp             SSEEEEEEEG-----GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred             cCccCCeEeC-----CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence            3455666665     344 5667777889999998 443 344445566788999999887777765 4789999875 4


Q ss_pred             eeeEecc---CC-cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE----EeC-----
Q psy2671         371 VMCRTLE---GH-AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS----GSD-----  437 (573)
Q Consensus       371 ~~~~~~~---~~-~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----g~~-----  437 (573)
                      .......   +. ...++.+++.                                     ++|.+.++    |..     
T Consensus       117 ~~~~~~~~~~~~~~~~~~~i~~d-------------------------------------~dG~l~~td~~~g~~~~~~~  159 (305)
T 3dr2_A          117 QAHLLVGRYAGKRLNSPNDLIVA-------------------------------------RDGAIWFTDPPFGLRKPSQG  159 (305)
T ss_dssp             CEEEEECEETTEECSCCCCEEEC-------------------------------------TTSCEEEECCSGGGSCGGGS
T ss_pred             CEEEEEeccCCCccCCCCCEEEC-------------------------------------CCCCEEEeCcCCCccccccc
Confidence            4321111   00 0111222222                                     44554443    221     


Q ss_pred             --------CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCeEE--Eee-cC
Q psy2671         438 --------DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDGRIGKFI--TTL-RG  500 (573)
Q Consensus       438 --------dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~~~~~~~--~~~-~~  500 (573)
                              .+.|..||..++....  +. .....+.++|+||++.|+.+...      +.|..||...+...  ..+ ..
T Consensus       160 ~~~~~~~~~~~v~~~d~~~g~~~~--~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~  236 (305)
T 3dr2_A          160 CPADPELAHHSVYRLPPDGSPLQR--MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV  236 (305)
T ss_dssp             CCCCCSSSCEEEEEECSSSCCCEE--EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred             cccccccCCCeEEEEcCCCCcEEE--Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence                    2467777765443221  22 33456889999999987777655      78999997654310  111 11


Q ss_pred             CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEE
Q psy2671         501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRL  570 (573)
Q Consensus       501 h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~i  570 (573)
                      .......+++.++|++.++ +.+ .|.+|+.. ++.+..+..+. .+..++|+++++.|..++.++..++
T Consensus       237 ~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~  302 (305)
T 3dr2_A          237 PDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML  302 (305)
T ss_dssp             SSSCCCSEEECTTSCEEEC-CSS-EEEEECTT-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred             CCCCCCeEEECCCCCEEEe-cCC-cEEEECCC-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence            1223346789999995544 444 49999984 55555554443 5788999999999988887765554

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.03  E-value=3.9e-10  Score=110.75  Aligned_cols=110  Identities=10%  Similarity=0.047  Sum_probs=58.6

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCc-ccEE
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK-QWIT  296 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~-~~v~  296 (573)
                      ++..+++++.|+.|..||..+++.+.....  ..+.+..+.+++..+++++.||.|+.||..+|+.+... ..+. ..+ 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~-   83 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELV-   83 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHH-
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccc-
Confidence            567899999999999999999999888776  45556666678878888899999999999888754321 1111 000 


Q ss_pred             EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe
Q psy2671         297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  335 (573)
                        ...|..  ..+..+++++.++.++.||..+++....+
T Consensus        84 --~~sp~~--~~~~~v~~g~~dg~v~a~D~~tG~~~w~~  118 (369)
T 2hz6_A           84 --QASPCR--SSDGILYMGKKQDIWYVIDLLTGEKQQTL  118 (369)
T ss_dssp             --TTCSCC-------CCCCEEEEEEEEECCC--------
T ss_pred             --ccCceE--ecCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence              001110  01234455556666666666666554433

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.01  E-value=2.7e-08  Score=105.49  Aligned_cols=301  Identities=14%  Similarity=0.091  Sum_probs=169.8

Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEE---EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWIT---ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~---~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      +..|+.++.++.|..+|..+|+.+.+..........   +...........+.++..++.|+.+..+|..+++.+..+..
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  156 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeecC
Confidence            456777888889999999999876542211100000   00000000001245777888999999999999988877654


Q ss_pred             C-C----ccEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee
Q psy2671         338 H-T----RSVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK  405 (573)
Q Consensus       338 h-~----~~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~  405 (573)
                      + .    ..+.+ ... .++.++.++.      ++.|..+|..+|+.+-.+.............+.       ...+...
T Consensus       157 ~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~-------~~~g~~~  228 (677)
T 1kb0_A          157 FEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDES-------MKRAART  228 (677)
T ss_dssp             TTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHH-------HHHHHTT
T ss_pred             CcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccc-------ccccccc
Confidence            4 1    11111 111 2456666553      789999999999876444321110000000000       0000000


Q ss_pred             eCCCCchhhhhh--h--hhheeeeCCCCcEEEEEeCCC-------------------eEEEEcCCCCccceeeecc-cc-
Q psy2671         406 YDPANPEESSKH--A--LAKYQAQCPEGEKLVSGSDDF-------------------TLFLWNPEKEKKSLARMTG-HQ-  460 (573)
Q Consensus       406 ~~~~~~~~~~~~--~--~~~~~~~~~~~~~l~sg~~dg-------------------~i~lwd~~~~~~~~~~~~~-h~-  460 (573)
                      |.+.  ...-..  .  .-......+.+..+..+..++                   .|..+|..+++..-..... |. 
T Consensus       229 w~~~--g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~  306 (677)
T 1kb0_A          229 WDPS--GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN  306 (677)
T ss_dssp             SCGG--GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC
T ss_pred             cccc--CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc
Confidence            0000  000000  0  000012234555666665543                   5888888877654333222 21 


Q ss_pred             ------ccEEEEEECCCC---CEEEEeeCCCcEEEEeCCCCeEEEeecCCc-----------ceE---------------
Q psy2671         461 ------QLINCVEFSPDG---RIIASASFDKSIKLWDGRIGKFITTLRGHV-----------QAV---------------  505 (573)
Q Consensus       461 ------~~v~~v~~sp~g---~~las~s~dg~i~lwd~~~~~~~~~~~~h~-----------~~v---------------  505 (573)
                            .....+....+|   ..++.++.+|.++++|..+|+.+..++...           ..+               
T Consensus       307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~  386 (677)
T 1kb0_A          307 WDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAV  386 (677)
T ss_dssp             SCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECS
T ss_pred             cccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEEC
Confidence                  112223444577   689999999999999999999876654210           111               


Q ss_pred             ---------EEEEECCCCCEEEEEeCC-------------------------------------------CcEEEEeCCc
Q psy2671         506 ---------YMVAWSSDSRLLVSGSAD-------------------------------------------STLKVWNMKT  533 (573)
Q Consensus       506 ---------~~v~~s~dg~~las~s~D-------------------------------------------~~v~vwd~~~  533 (573)
                               ..++++|++.++++...+                                           +.|..||+.+
T Consensus       387 P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t  466 (677)
T 1kb0_A          387 PGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA  466 (677)
T ss_dssp             SCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT
T ss_pred             cCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC
Confidence                     146889998888776432                                           7899999999


Q ss_pred             ccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       534 ~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++.+-..+ +..++.+..++.++..++.++.|+.++.|+
T Consensus       467 G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D  504 (677)
T 1kb0_A          467 QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYH  504 (677)
T ss_dssp             TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence            98876654 334455556777888899999999999886

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.01  E-value=1.4e-10  Score=114.04  Aligned_cols=187  Identities=13%  Similarity=0.011  Sum_probs=106.4

Q ss_pred             CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccc
Q psy2671         121 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCT  200 (573)
Q Consensus       121 ~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (573)
                      ++..+++++.|+.|+.||..+|+.+++...                                                  
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--------------------------------------------------   37 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--------------------------------------------------   37 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------------------------------------------------
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------------------------------------------------
Confidence            578899999999999999999987654221                                                  


Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc-EEE-EEEcCCCCeEEEEeeCCeEEEEEC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW-VLC-IAWSPDSKQLVSGCKNGVIHAWDS  278 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~-V~~-v~~s~dg~~l~sgs~dg~i~vwd~  278 (573)
                             +.+.+..+.+++..+++++.|+.|..||..+++.+.....+... +.+ ..+. ++..|++|+.++.+..||.
T Consensus        38 -------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~  109 (369)
T 2hz6_A           38 -------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDL  109 (369)
T ss_dssp             -------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECC
T ss_pred             -------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEEC
Confidence                   11122224456777888889999999999988877665543211 100 0111 3457888999999999999


Q ss_pred             CCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC----cEEE
Q psy2671         279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS----GLIY  354 (573)
Q Consensus       279 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~  354 (573)
                      .+|+.+... ..+.    ...+.|     .+..+++++.|+.|+.||..+++....+..+.  .....+.++    +.++
T Consensus       110 ~tG~~~w~~-~~~~----~~~~~p-----~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~  177 (369)
T 2hz6_A          110 LTGEKQQTL-SSAF----ADSLSP-----STSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHF  177 (369)
T ss_dssp             C--------------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEE
T ss_pred             CCCcEEEEe-cCCC----cccccc-----cCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEE
Confidence            999876432 2221    112222     45678888999999999998887654433211  112223332    5788


Q ss_pred             EEeCCCeEEEEeCCCCeeeEecc
Q psy2671         355 SASQDRTIKVWRASDGVMCRTLE  377 (573)
Q Consensus       355 s~s~d~~i~vw~~~~~~~~~~~~  377 (573)
                      .++.|+.+..||..+|+..-...
T Consensus       178 ~~~~dg~v~a~d~~tG~~~W~~~  200 (369)
T 2hz6_A          178 VSNGDGLVVTVDSESGDVLWIQN  200 (369)
T ss_dssp             EEETSCEEEEECTTTCCEEEEEE
T ss_pred             EECCCCEEEEEECCCCcEEEEec
Confidence            89999999999999988765544

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.01  E-value=1.4e-08  Score=98.09  Aligned_cols=264  Identities=13%  Similarity=0.079  Sum_probs=151.2

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM  288 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~  288 (573)
                      .+.++.+.++|. +..++.+  +..+|. +++.+..............+.  +..|..++.++.+..+|.. ++......
T Consensus        61 ~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~  133 (330)
T 3hxj_A           61 IECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK  133 (330)
T ss_dssp             EEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred             cccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence            345566666665 4444444  888885 555443333222222223333  4568888889999999988 65543211


Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCC
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRAS  368 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~  368 (573)
                       .....+.++.     ...++ .+..++.++.+..+|.. ++...........+.++....++.++.++  +.|..++ .
T Consensus       134 -~~~~~~~~~~-----~~~~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~  202 (330)
T 3hxj_A          134 -TKKAIYATPI-----VSEDG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-P  202 (330)
T ss_dssp             -CSSCCCSCCE-----ECTTS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-T
T ss_pred             -CCCceeeeeE-----EcCCC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-C
Confidence             1111111111     11233 46667788999999988 76665555555556667776777788887  7888888 5


Q ss_pred             CCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCC
Q psy2671         369 DGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       369 ~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~  448 (573)
                      ++............+.++..                                     .+++ .+..++.++.+..++...
T Consensus       203 ~g~~~~~~~~~~~~~~~~~~-------------------------------------~~~g-~l~v~t~~~gl~~~~~~g  244 (330)
T 3hxj_A          203 DGTEKWNFYAGYWTVTRPAI-------------------------------------SEDG-TIYVTSLDGHLYAINPDG  244 (330)
T ss_dssp             TSCEEEEECCSSCCCSCCEE-------------------------------------CTTS-CEEEEETTTEEEEECTTS
T ss_pred             CCcEEEEEccCCcceeceEE-------------------------------------CCCC-eEEEEcCCCeEEEECCCC
Confidence            66544333221111111111                                     1233 456677777788887532


Q ss_pred             CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671         449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV  528 (573)
Q Consensus       449 ~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~v  528 (573)
                       .. +.........+.++.+.+++. |..++.+|.+..+|. +++.+..+......+.++...++|++ ..++.+|.+++
T Consensus       245 -~~-~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~  319 (330)
T 3hxj_A          245 -TE-KWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYA  319 (330)
T ss_dssp             -CE-EEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEE
T ss_pred             -CE-eEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEE
Confidence             22 222222233344456666665 556777888999996 67766665544445667777777765 45888999998


Q ss_pred             EeCCc
Q psy2671         529 WNMKT  533 (573)
Q Consensus       529 wd~~~  533 (573)
                      .....
T Consensus       320 ~~~~~  324 (330)
T 3hxj_A          320 LFNLE  324 (330)
T ss_dssp             EEC--
T ss_pred             Eeccc
Confidence            77644

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.91  E-value=1.5e-07  Score=99.70  Aligned_cols=309  Identities=13%  Similarity=0.139  Sum_probs=175.6

Q ss_pred             CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccc
Q psy2671         219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       219 g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~  287 (573)
                      +..++.++.++.|.-+|..+++.+.+.......          + ..+++  ++..|+.++.|+.|..+|..+|+.+.+.
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            456777888999999999999998877543211          0 11222  3557888999999999999999876543


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCC--C-c------------------
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSH--T-R------------------  340 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h--~-~------------------  340 (573)
                      ..........+...|..  .+ ..++.+..      +|.|+.+|..+++.+..+...  . .                  
T Consensus       144 ~~~~~~~~~~~~~~P~v--~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  220 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRV--VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD  220 (668)
T ss_dssp             ECSCTTSSCBCCSCCEE--ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred             ccCCCCCcceecCCCEE--EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence            22111000001111111  12 23444332      589999999999887665321  0 0                  


Q ss_pred             ----------cEEEEEECC-CcEEEEEeCCC-------------------eEEEEeCCCCeeeEeccC--CcceeeEEEe
Q psy2671         341 ----------SVTCIRWGG-SGLIYSASQDR-------------------TIKVWRASDGVMCRTLEG--HAHWVNTLAL  388 (573)
Q Consensus       341 ----------~v~~~~~~~-~~~l~s~s~d~-------------------~i~vw~~~~~~~~~~~~~--~~~~v~~~~~  388 (573)
                                ....+++.+ .+.++.++.++                   +|..+|..+|+..-.++.  |..+-..  .
T Consensus       221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~--~  298 (668)
T 1kv9_A          221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT--A  298 (668)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC--C
T ss_pred             ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc--C
Confidence                      001234443 35777777665                   377788887776544332  2211100  0


Q ss_pred             ccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc---EEEEEeCCCeEEEEcCCCCccceeeeccc------
Q psy2671         389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE---KLVSGSDDFTLFLWNPEKEKKSLARMTGH------  459 (573)
Q Consensus       389 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~sg~~dg~i~lwd~~~~~~~~~~~~~h------  459 (573)
                      . ......                           ....+|+   .++.++.+|.++++|..+++.........      
T Consensus       299 ~-~~~~~~---------------------------d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~  350 (668)
T 1kv9_A          299 T-QQITLA---------------------------ELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK  350 (668)
T ss_dssp             C-SCEEEE---------------------------EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred             C-CCcEEE---------------------------EeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence            0 000000                           0001232   57788889999999887765431110000      


Q ss_pred             -----ccc------------------------EEEEEECCCCCEEEEe--------------------------------
Q psy2671         460 -----QQL------------------------INCVEFSPDGRIIASA--------------------------------  478 (573)
Q Consensus       460 -----~~~------------------------v~~v~~sp~g~~las~--------------------------------  478 (573)
                           ..+                        -..++|+|+..++...                                
T Consensus       351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  430 (668)
T 1kv9_A          351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD  430 (668)
T ss_dssp             ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred             cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence                 000                        0126788876665541                                


Q ss_pred             ----eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE-EEEEEc
Q psy2671         479 ----SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV-YAVDWA  553 (573)
Q Consensus       479 ----s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v-~~~~~s  553 (573)
                          ..+|.|..||..+++.+...+.+. ......+...+.+++.++.|+.++.||.++++.+..+....+.. .-+.+.
T Consensus       431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~  509 (668)
T 1kv9_A          431 VPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFE  509 (668)
T ss_dssp             CCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred             CCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEE
Confidence                134889999999999877665332 22222344567788899999999999999999876654332111 123445


Q ss_pred             cCCC-EEEEee
Q psy2671         554 PDGE-KVASGG  563 (573)
Q Consensus       554 ~d~~-~l~s~~  563 (573)
                      .+|+ +++.++
T Consensus       510 ~~G~~yva~~~  520 (668)
T 1kv9_A          510 LAGRQYVAIMA  520 (668)
T ss_dssp             ETTEEEEEEEE
T ss_pred             ECCEEEEEEEe
Confidence            5666 444443

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.86  E-value=2.2e-07  Score=90.14  Aligned_cols=102  Identities=14%  Similarity=0.073  Sum_probs=68.9

Q ss_pred             CCCCCEEEEeeCCCcEEEEeCCCC--eEEEeecC-------Cc---ceEEEEEECCCCCEEEEEeC---------CCcEE
Q psy2671         469 SPDGRIIASASFDKSIKLWDGRIG--KFITTLRG-------HV---QAVYMVAWSSDSRLLVSGSA---------DSTLK  527 (573)
Q Consensus       469 sp~g~~las~s~dg~i~lwd~~~~--~~~~~~~~-------h~---~~v~~v~~s~dg~~las~s~---------D~~v~  527 (573)
                      ++++..++..+. +.+.+.|....  +.+..+.-       +.   .....++++||++.++.+..         ++.+.
T Consensus       219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~  297 (368)
T 1mda_H          219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS  297 (368)
T ss_dssp             ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred             cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence            566666666666 89999998653  22222211       00   11112689999998876543         23566


Q ss_pred             EEeCCcccccccccCcCCCEEEEEEccCCCE-EEEee-CCCcEEEcc
Q psy2671         528 VWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGG-KDKVLRLWQ  572 (573)
Q Consensus       528 vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~-l~s~~-~d~~i~iw~  572 (573)
                      ++|+.+.+.+..++... ....+.|+|||++ +++.. .++.|.+++
T Consensus       298 ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID  343 (368)
T 1mda_H          298 SVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD  343 (368)
T ss_dssp             EEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred             EEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence            99999999888886543 5789999999985 56666 589998886

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.85  E-value=0.00027  Score=76.64  Aligned_cols=349  Identities=11%  Similarity=0.056  Sum_probs=196.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-------CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-------GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-------~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ..|.++...++|... .|..++-+..||..+++......       -....|.++...++|... .|+.+ -+.+||..+
T Consensus       163 ~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lw-igt~~-Gl~~~d~~~  239 (781)
T 3v9f_A          163 EQTWTATEAEDGKLY-IGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIW-IGTSK-GLALFNANT  239 (781)
T ss_dssp             CCEEEEEEEETTEEE-EEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEE-EEETT-EEEEEETTT
T ss_pred             cceEEEEECCCCCEE-EEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEE-EEeCC-cHheECCCC
Confidence            457888887777644 45666568889987765322111       113568999988888644 45555 588899876


Q ss_pred             Cceeccccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--------------CCCc
Q psy2671         281 GKQIGQPMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--------------SHTR  340 (573)
Q Consensus       281 ~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--------------~h~~  340 (573)
                      ++.......      .....|.++...+     ++ .+..|+..+-|.++|...........              ....
T Consensus       240 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~-----~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~  313 (781)
T 3v9f_A          240 ETFTNFHNNPGNIHGALSSYIFSIKQLK-----DN-KLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNA  313 (781)
T ss_dssp             TEEEC-----------CCCCEEEEEECT-----TS-EEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSS
T ss_pred             CcEEEEEcCCCccccccCceEEEEEECC-----CC-CEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCC
Confidence            643211100      1124466665432     33 45556664667888887654322111              2345


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEec---------cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL---------EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      .|.++....++.++.|+.++-|..++...+......         ......|.++....+..+=+.....+-..+++...
T Consensus       314 ~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~  393 (781)
T 3v9f_A          314 SARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKR  393 (781)
T ss_dssp             CEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred             eEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence            789999988899999998888999987755432211         01224577777665544433333333333333211


Q ss_pred             hhhh---hhhh--hhee--eeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---cccccEEEEEECCCCCEEEEeeCC
Q psy2671         412 EESS---KHAL--AKYQ--AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---GHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       412 ~~~~---~~~~--~~~~--~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                      ....   ....  ....  ...+++ .|-.|+.++-+..++..+...  ..+.   .....|.++...++|.+.+ |+. 
T Consensus       394 ~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-  468 (781)
T 3v9f_A          394 VAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDKNKKIWI-GTH-  468 (781)
T ss_dssp             EEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECTTSEEEE-EET-
T ss_pred             eEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECCCCCEEE-EEC-
Confidence            0000   0000  0011  112334 455577767788888765432  2221   1345689999998887655 444 


Q ss_pred             CcEEEEeCCCCeEEEeecCC-----cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc--cC-cCCCEEEEEEc
Q psy2671         482 KSIKLWDGRIGKFITTLRGH-----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL--PG-HGDEVYAVDWA  553 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h-----~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l--~~-h~~~v~~~~~s  553 (573)
                      +-+..||..+++........     ...|.++...++|.+.+ |+.++-+..||..+++...-.  .+ ....|.++...
T Consensus       469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d  547 (781)
T 3v9f_A          469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRS  547 (781)
T ss_dssp             TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEEC
T ss_pred             CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEEC
Confidence            55888998776543222111     35789999999988665 444344777888765432211  11 23578999888


Q ss_pred             cCCCEEEEeeCCCcEEEcc
Q psy2671         554 PDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       554 ~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++|+..++. .+|.+..|+
T Consensus       548 ~~g~lWi~T-~~Glv~~~d  565 (781)
T 3v9f_A          548 SKGQMWLAT-GEGLVCFPS  565 (781)
T ss_dssp             TTSCEEEEE-TTEEEEESC
T ss_pred             CCCCEEEEE-CCCceEEEC
Confidence            888755543 366535553

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.72  E-value=0.00069  Score=73.44  Aligned_cols=346  Identities=10%  Similarity=0.039  Sum_probs=192.6

Q ss_pred             CcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeeeEEec-----CCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         208 EAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCE-----GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       208 ~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      ..|.++...+  +|. |..++.++.+..||..+++......     -....|.++...++|. |..|+.++-+..||..+
T Consensus       115 ~~i~~i~~d~~~~g~-lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lwigt~~~Gl~~~~~~~  192 (781)
T 3v9f_A          115 NDVTHITSSVQAGKG-LWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGK-LYIGHVEGGLSILSLND  192 (781)
T ss_dssp             SCEEEEEECSSTTSE-EEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTE-EEEEETTTEEEEEETTT
T ss_pred             CcceEEEecCccCCC-EEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCC-EEEEecCCCeEEEcCCC
Confidence            4688888877  665 4456545568889987765332211     1234588888877775 55566665688899877


Q ss_pred             Cceecccc------cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-------CCCccEEEEEE
Q psy2671         281 GKQIGQPM------RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-------SHTRSVTCIRW  347 (573)
Q Consensus       281 ~~~~~~~~------~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-------~h~~~v~~~~~  347 (573)
                      ++......      ......|.++...+     ++. +..++.+ -+.+||..+++......       .....|.++..
T Consensus       193 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~-----~g~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~  265 (781)
T 3v9f_A          193 KSVKHFVHDPQNPNSLPGNDVRCIYKDT-----NGN-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQ  265 (781)
T ss_dssp             TEEEEECC--------CCSSEEEEEECT-----TCC-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEE
T ss_pred             CceEeeecCCCCcccCCCCceeEEEEcC-----CCC-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEE
Confidence            64321100      00123466665432     344 4444555 58889987665433221       12356899998


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEecc--------------CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchh
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRTLE--------------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE  413 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~--------------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  413 (573)
                      ..++.++.|+..+-|.+++..++.......              .....|.++....+..+=+.....+...+++....-
T Consensus       266 d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~  345 (781)
T 3v9f_A          266 LKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTF  345 (781)
T ss_dssp             CTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSC
T ss_pred             CCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcc
Confidence            889999999986778888877654322111              122346666666554433333333333333321100


Q ss_pred             hh---------hhh--hhheee--eCCCCcEEEEEeCCCeEEEEcCCCCccceee--eccccccEEEEEECCCCCEEEEe
Q psy2671         414 SS---------KHA--LAKYQA--QCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR--MTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       414 ~~---------~~~--~~~~~~--~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~--~~~h~~~v~~v~~sp~g~~las~  478 (573)
                      ..         ...  .....+  ..++| .|-.|+.++-+..|+..+.......  .......|.++...++|.+.+ |
T Consensus       346 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-g  423 (781)
T 3v9f_A          346 HTWSYSPTQMNESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-G  423 (781)
T ss_dssp             EEEC----CCCSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-E
T ss_pred             eeeccCccccccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-E
Confidence            00         000  000111  12233 4556666666778886543211000  011235689999998887665 6


Q ss_pred             eCCCcEEEEeCCCCeEEEeec--CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC-----cCCCEEEEE
Q psy2671         479 SFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG-----HGDEVYAVD  551 (573)
Q Consensus       479 s~dg~i~lwd~~~~~~~~~~~--~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~-----h~~~v~~~~  551 (573)
                      +.++-+..+|.++++......  .....|.++...++|.+.+ |+. +.|..||..+++.......     ....|.++.
T Consensus       424 t~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  501 (781)
T 3v9f_A          424 TYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIA  501 (781)
T ss_dssp             ETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEE
T ss_pred             eccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEE
Confidence            666779999988776433221  1345789999888887655 444 5688999877654321111     135789998


Q ss_pred             EccCCCEEEEeeCCC
Q psy2671         552 WAPDGEKVASGGKDK  566 (573)
Q Consensus       552 ~s~d~~~l~s~~~d~  566 (573)
                      ..++|+..+.....|
T Consensus       502 ~d~~g~lWigt~~~G  516 (781)
T 3v9f_A          502 QDSEGRFWIGTFGGG  516 (781)
T ss_dssp             ECTTCCEEEEESSSC
T ss_pred             EcCCCCEEEEEcCCC
Confidence            888887555433344

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.71  E-value=3.7e-06  Score=87.14  Aligned_cols=309  Identities=14%  Similarity=0.123  Sum_probs=169.1

Q ss_pred             CCeEEEEeC-CCeEEEEEC-CCCeeeEEecCCCCc-----------EEEEEEcCCCCe----EEEEeeCCeEEEEECCCC
Q psy2671         219 GRSLASGSG-DTTVRFWDV-TTQTPLFKCEGHKHW-----------VLCIAWSPDSKQ----LVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       219 g~~las~s~-d~~i~iwd~-~~~~~~~~~~~h~~~-----------V~~v~~s~dg~~----l~sgs~dg~i~vwd~~~~  281 (573)
                      +..+..++. ++.|.-+|. .+++.+.+.......           ...++++|.+..    |+.++.|+.+..+|..+|
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            446667777 888999999 899988776533210           123456544445    888999999999999999


Q ss_pred             ceeccccc-CCcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEecCCCcc-------------
Q psy2671         282 KQIGQPMR-GHKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVLTSHTRS-------------  341 (573)
Q Consensus       282 ~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~h~~~-------------  341 (573)
                      +.+.+... .+... ..+.-.|..  .+ ..++.++      .+|.|+-+|..+++.+-........             
T Consensus       142 ~~~W~~~~~~~~~~-~~~~ssP~v--~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~  217 (599)
T 1w6s_A          142 ETVWKVENSDIKVG-STLTIAPYV--VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN  217 (599)
T ss_dssp             CEEEEEECCCGGGT-CBCCSCCEE--ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred             CEEEeecCCCCCcc-ceeecCCEE--EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence            87654221 11100 001111111  12 2444443      3799999999999877654322110             


Q ss_pred             ------------------------E-EEEEEC-CCcEEEEEeCCC----------------eEEEEeCCCCeeeEeccCC
Q psy2671         342 ------------------------V-TCIRWG-GSGLIYSASQDR----------------TIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       342 ------------------------v-~~~~~~-~~~~l~s~s~d~----------------~i~vw~~~~~~~~~~~~~~  379 (573)
                                              + ..+.+. ..+.++.++.+.                +|.-+|.++|+..-.++..
T Consensus       218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~  297 (599)
T 1w6s_A          218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT  297 (599)
T ss_dssp             GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred             ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence                                    0 011222 345677766543                6777777777655333221


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeee
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARM  456 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~  456 (573)
                      .+....+...... ...                          .....+|   ..++.++.+|.++++|.++++......
T Consensus       298 ~~d~wd~d~~~~p-~l~--------------------------d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          298 PHDEWDYAGVNVM-MLS--------------------------EQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             TTCSSCCCCCCCC-EEE--------------------------EEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             CCccccccCCCcc-EEE--------------------------eccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence            1100000000000 000                          0000234   456778888889888887765432211


Q ss_pred             cc------------ccccE--------------------------EEEEECCCCCEEEEee-------------------
Q psy2671         457 TG------------HQQLI--------------------------NCVEFSPDGRIIASAS-------------------  479 (573)
Q Consensus       457 ~~------------h~~~v--------------------------~~v~~sp~g~~las~s-------------------  479 (573)
                      ..            ...++                          ..++|+|+..++.+..                   
T Consensus       351 ~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~  430 (599)
T 1w6s_A          351 LDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQF  430 (599)
T ss_dssp             SSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSC
T ss_pred             ccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcc
Confidence            10            00001                          2356777766654421                   


Q ss_pred             --------------------CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         480 --------------------FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       480 --------------------~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                                          .+|.+.-||+.+++.+...+.. .+...-.....+.++..++.|+.++.||.++++.+-.
T Consensus       431 ~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~  509 (599)
T 1w6s_A          431 FVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK  509 (599)
T ss_dssp             CCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             eecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence                                3478999999999877665311 1111111223566777899999999999999998765


Q ss_pred             ccCcCC-CEEEEEEccCCCEE
Q psy2671         540 LPGHGD-EVYAVDWAPDGEKV  559 (573)
Q Consensus       540 l~~h~~-~v~~~~~s~d~~~l  559 (573)
                      ++-... ...-+.|..+|++.
T Consensus       510 ~~l~~g~~~~P~~y~~~G~qy  530 (599)
T 1w6s_A          510 FKIPSGAIGYPMTYTHKGTQY  530 (599)
T ss_dssp             EECSSCCCSCCEEEEETTEEE
T ss_pred             eeCCCCcEeccEEEEeCCEEE
Confidence            532221 11224566788743

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.70  E-value=3.1e-06  Score=87.75  Aligned_cols=306  Identities=16%  Similarity=0.133  Sum_probs=168.9

Q ss_pred             CCeEEEEeC-CCeEEEEEC-CCCeeeEEecCCCCc----------E-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceec
Q psy2671         219 GRSLASGSG-DTTVRFWDV-TTQTPLFKCEGHKHW----------V-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       219 g~~las~s~-d~~i~iwd~-~~~~~~~~~~~h~~~----------V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~  285 (573)
                      +..+..++. ++.|.-+|. .+++.+.+.......          + ..++.  ++..++.++.|+.+..+|..+|+.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            445666777 889999999 899988776432210          0 11222  35578888999999999999998765


Q ss_pred             ccc-cCCcccEEEEEecccccCCCCCEEEEEeC------CCcEEEEECCCCeEEEEecCCCcc-----------------
Q psy2671         286 QPM-RGHKQWITALSWEPFHLNHQCRRFASSGK------DGAIRIWDVILSQCVRVLTSHTRS-----------------  341 (573)
Q Consensus       286 ~~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~~~~~~~~~h~~~-----------------  341 (573)
                      +.. ..+... ..+.-.|..  .+ ..++.++.      ++.|+.+|..+++.+..+......                 
T Consensus       140 ~~~~~~~~~~-~~~~~~P~v--~~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G  215 (571)
T 2ad6_A          140 EVEVCDPKVG-STLTQAPFV--AK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYG  215 (571)
T ss_dssp             EEECCCGGGT-CBCCSCCEE--ET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGC
T ss_pred             EecCCCCCcc-ceeccCCEE--EC-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccc
Confidence            421 111100 001111111  12 34444443      789999999999877654321110                 


Q ss_pred             --------------------E-EEEEECC-CcEEEEEeCC----------------CeEEEEeCCCCeeeEeccC--Ccc
Q psy2671         342 --------------------V-TCIRWGG-SGLIYSASQD----------------RTIKVWRASDGVMCRTLEG--HAH  381 (573)
Q Consensus       342 --------------------v-~~~~~~~-~~~l~s~s~d----------------~~i~vw~~~~~~~~~~~~~--~~~  381 (573)
                                          + ..+++.+ .+.++.++.+                ++|..+|..+|+..-.++.  |..
T Consensus       216 ~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~  295 (571)
T 2ad6_A          216 QFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE  295 (571)
T ss_dssp             CSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS
T ss_pred             ccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc
Confidence                                0 0122322 3456655532                2477777777765433321  111


Q ss_pred             eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC---cEEEEEeCCCeEEEEcCCCCccceeeecc
Q psy2671         382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG---EKLVSGSDDFTLFLWNPEKEKKSLARMTG  458 (573)
Q Consensus       382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~sg~~dg~i~lwd~~~~~~~~~~~~~  458 (573)
                      +-...  .. ...                           ......+|   ..++.++.+|.+..+|..+++.......+
T Consensus       296 ~d~~~--~~-~p~---------------------------l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~  345 (571)
T 2ad6_A          296 WDFAG--VN-QMV---------------------------LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVD  345 (571)
T ss_dssp             SCCCC--CC-CCE---------------------------EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESS
T ss_pred             ccccc--CC-CCE---------------------------EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeeccc
Confidence            00000  00 000                           00000234   24667788888988888776543221111


Q ss_pred             c------------cccE--------------------------EEEEECCCCCEEEEee---------------------
Q psy2671         459 H------------QQLI--------------------------NCVEFSPDGRIIASAS---------------------  479 (573)
Q Consensus       459 h------------~~~v--------------------------~~v~~sp~g~~las~s---------------------  479 (573)
                      .            ..++                          ..++|+|+..++.+..                     
T Consensus       346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~  425 (571)
T 2ad6_A          346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV  425 (571)
T ss_dssp             TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred             CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence            1            0011                          2357888877776653                     


Q ss_pred             ----------------CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc
Q psy2671         480 ----------------FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       480 ----------------~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h  543 (573)
                                      .+|.+..||..+++.+..+.... .+....+...+..++.++.|+.|+.||.++++.+..+...
T Consensus       426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~  504 (571)
T 2ad6_A          426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence                            35789999999998877654221 1222222334667778999999999999999987655422


Q ss_pred             CCC-EEEEEEccCCCEEEE
Q psy2671         544 GDE-VYAVDWAPDGEKVAS  561 (573)
Q Consensus       544 ~~~-v~~~~~s~d~~~l~s  561 (573)
                      ... -.-+.+..+|+.++.
T Consensus       505 ~~~~~~p~~~~~~G~~yv~  523 (571)
T 2ad6_A          505 SGGIGSPMTYSFKGKQYIG  523 (571)
T ss_dssp             SCCCSCCEEEEETTEEEEE
T ss_pred             CCcEeeeEEEEECCEEEEE
Confidence            111 112345677775543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.65  E-value=5.2e-06  Score=80.98  Aligned_cols=215  Identities=15%  Similarity=0.119  Sum_probs=130.1

Q ss_pred             EEEEEeCCCcEEEEECCCC----eEEEEec-------CCCccEEEEEECCCcEEEEEeCC------CeEEEEeCCCCeee
Q psy2671         311 RFASSGKDGAIRIWDVILS----QCVRVLT-------SHTRSVTCIRWGGSGLIYSASQD------RTIKVWRASDGVMC  373 (573)
Q Consensus       311 ~l~s~~~dg~v~iwd~~~~----~~~~~~~-------~h~~~v~~~~~~~~~~l~s~s~d------~~i~vw~~~~~~~~  373 (573)
                      .++++..++.|.++|+.+.    +.++++.       .....-..+...+++.++++..+      +.|.+.|..+++.+
T Consensus        98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~  177 (462)
T 2ece_A           98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPL  177 (462)
T ss_dssp             EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEE
T ss_pred             EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEE
Confidence            4566777899999998754    5555552       01123345566788865555444      78999999988887


Q ss_pred             EeccCCcc---eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe--------------
Q psy2671         374 RTLEGHAH---WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS--------------  436 (573)
Q Consensus       374 ~~~~~~~~---~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~--------------  436 (573)
                      .++.....   .-..+.+                                     +|+++.+++..              
T Consensus       178 ~~~~~~~~~~~~~Yd~~~-------------------------------------~p~~~~mvsS~wg~p~~~~~g~~~~  220 (462)
T 2ece_A          178 GKWEIDRGDQYLAYDFWW-------------------------------------NLPNEVLVSSEWAVPNTIEDGLKLE  220 (462)
T ss_dssp             EECCSBCTTCCCCCCEEE-------------------------------------ETTTTEEEECBCCCHHHHTTCCCTT
T ss_pred             EEEccCCCCccccceEEE-------------------------------------CCCCCEEEEccCcCccccccccchh
Confidence            77652111   0111222                                     24455555543              


Q ss_pred             -----CCCeEEEEcCCCCccceeeecc--ccccEEEEEE--CCCCCEEEEee------CCCcEEEEeCCCCeE--EEee-
Q psy2671         437 -----DDFTLFLWNPEKEKKSLARMTG--HQQLINCVEF--SPDGRIIASAS------FDKSIKLWDGRIGKF--ITTL-  498 (573)
Q Consensus       437 -----~dg~i~lwd~~~~~~~~~~~~~--h~~~v~~v~~--sp~g~~las~s------~dg~i~lwd~~~~~~--~~~~-  498 (573)
                           .+.+|.+||+.+. +....+.-  .......+.|  +|+|+++.+++      .+++|.+|....++.  .+.+ 
T Consensus       221 ~~~~~~~d~V~v~D~~~~-k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId  299 (462)
T 2ece_A          221 HLKDRYGNRIHFWDLRKR-KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE  299 (462)
T ss_dssp             THHHHSCCEEEEEETTTT-EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred             hhhhccCCEEEEEECCCC-cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence                 4678999999875 33333322  1123445666  99999887776      566887765433321  1111 


Q ss_pred             -cCC----------------cceEEEEEECCCCCEEEEEeC-CCcEEEEeCCcc---cccccccCc-----------C--
Q psy2671         499 -RGH----------------VQAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKTK---KIEQDLPGH-----------G--  544 (573)
Q Consensus       499 -~~h----------------~~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~~---~~~~~l~~h-----------~--  544 (573)
                       ...                ......+.+|+||++|.++.. .+.|.+||+...   +.+..+.-.           .  
T Consensus       300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~  379 (462)
T 2ece_A          300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKL  379 (462)
T ss_dssp             ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCC
T ss_pred             CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccC
Confidence             110                134567899999999887764 678999998532   333332211           0  


Q ss_pred             -CCEEEEEEccCCCEEEEee
Q psy2671         545 -DEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       545 -~~v~~~~~s~d~~~l~s~~  563 (573)
                       +.-..+.++|||++|..+.
T Consensus       380 ~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          380 TGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             CSCCCCEEECTTSSEEEEEC
T ss_pred             CCCCCEEEEcCCCCEEEEEc
Confidence             0135688999999998776

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.64  E-value=1.2e-05  Score=83.36  Aligned_cols=79  Identities=20%  Similarity=0.340  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE-EEEEEccCCCEE
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV-YAVDWAPDGEKV  559 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v-~~~~~s~d~~~l  559 (573)
                      +|.|.-||+.+++.+....... .+..-.....+.+++.++.|+.++.||.++++.+-.++...+.. .-+.|..+|++.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY  543 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY  543 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred             cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence            6889999999998876654321 11111112246678889999999999999999886655332211 125667788754


Q ss_pred             E
Q psy2671         560 A  560 (573)
Q Consensus       560 ~  560 (573)
                      +
T Consensus       544 v  544 (582)
T 1flg_A          544 L  544 (582)
T ss_dssp             E
T ss_pred             E
Confidence            3

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.61  E-value=2.4e-05  Score=76.37  Aligned_cols=146  Identities=18%  Similarity=0.202  Sum_probs=90.2

Q ss_pred             CCCCeEEE-EeCCCeEEEEECCCC----eeeEEec--------CCCCcEEEEEEcCCCCeEEEEeeC------CeEEEEE
Q psy2671         217 PNGRSLAS-GSGDTTVRFWDVTTQ----TPLFKCE--------GHKHWVLCIAWSPDSKQLVSGCKN------GVIHAWD  277 (573)
Q Consensus       217 p~g~~las-~s~d~~i~iwd~~~~----~~~~~~~--------~h~~~V~~v~~s~dg~~l~sgs~d------g~i~vwd  277 (573)
                      +++++|+. +..+++|.++|+.+.    +.....+        +- ..-..+..+|+| .++++..+      |.|.+.|
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD  170 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD  170 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence            78887755 556789999998754    3333332        11 123456788999 66666555      7899999


Q ss_pred             CCCCceecccccC-Cc-ccEEEEEecccccCCCCCEEEEEe-------------------CCCcEEEEECCCCeEEEEec
Q psy2671         278 SSTGKQIGQPMRG-HK-QWITALSWEPFHLNHQCRRFASSG-------------------KDGAIRIWDVILSQCVRVLT  336 (573)
Q Consensus       278 ~~~~~~~~~~~~~-h~-~~v~~~~~~~~~~~~~~~~l~s~~-------------------~dg~v~iwd~~~~~~~~~~~  336 (573)
                      ..+++.+.....+ .. ..-+.+-|.|     +.+.++++.                   ...+|.+||+.+++.+..+.
T Consensus       171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p-----~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~  245 (462)
T 2ece_A          171 HYSFEPLGKWEIDRGDQYLAYDFWWNL-----PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT  245 (462)
T ss_dssp             TTTCCEEEECCSBCTTCCCCCCEEEET-----TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred             CCCCeEEEEEccCCCCccccceEEECC-----CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence            9988766543322 11 1112233333     556677664                   36899999999887777765


Q ss_pred             CC--CccEEEEEE--CCCc-EEEEE-e-----CCCeEEEEeCCC
Q psy2671         337 SH--TRSVTCIRW--GGSG-LIYSA-S-----QDRTIKVWRASD  369 (573)
Q Consensus       337 ~h--~~~v~~~~~--~~~~-~l~s~-s-----~d~~i~vw~~~~  369 (573)
                      .-  ......+.|  ++++ .++.+ -     .+++|.+|....
T Consensus       246 vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~  289 (462)
T 2ece_A          246 LGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED  289 (462)
T ss_dssp             SCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred             cCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence            42  123445555  7776 44444 3     566777766543

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.54  E-value=1.3e-05  Score=85.05  Aligned_cols=275  Identities=13%  Similarity=0.094  Sum_probs=140.8

Q ss_pred             EEEEcC-CCCeEEEEeCCC-----------eEEEEECCCCee--eEEe-cCCCCcEEEEEEcCCCCeEEEEee-CCeEEE
Q psy2671         212 SVKFSP-NGRSLASGSGDT-----------TVRFWDVTTQTP--LFKC-EGHKHWVLCIAWSPDSKQLVSGCK-NGVIHA  275 (573)
Q Consensus       212 ~~~fsp-~g~~las~s~d~-----------~i~iwd~~~~~~--~~~~-~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~v  275 (573)
                      ++++.| +++.++.|+.+.           .+.+||..+++-  +... ..+.....++++.++|+.++.|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            556777 888888887543           688999887642  2222 223334455788899998888884 458999


Q ss_pred             EECCCCceecc-cccCCcccEEEEEecccccCCCCCEEEEEe-CC-----CcEEEEECCCCeEEEEec-----CCCccEE
Q psy2671         276 WDSSTGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSG-KD-----GAIRIWDVILSQCVRVLT-----SHTRSVT  343 (573)
Q Consensus       276 wd~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~d-----g~v~iwd~~~~~~~~~~~-----~h~~~v~  343 (573)
                      ||+.+.+-... .+...... .++..     -.+++.++.|| .+     ..+.+||..+.+....-.     .....-.
T Consensus       270 yd~~t~~W~~~~~~~~~R~~-~s~~~-----~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~  343 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGY-QSSAT-----MSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ  343 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSS-CEEEE-----CTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT
T ss_pred             ecCcCCceeECCCCCccccc-cceEE-----ecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc
Confidence            99876642211 11111111 11111     12567888888 34     568999998776544210     0000000


Q ss_pred             EEEECCCcEEEEEeCC---------CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhh
Q psy2671         344 CIRWGGSGLIYSASQD---------RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEES  414 (573)
Q Consensus       344 ~~~~~~~~~l~s~s~d---------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  414 (573)
                      ++....+..++.|+.+         ..+..||..+.........+..       .             . ...+...   
T Consensus       344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~-------~-------------~-~~~~~~~---  399 (656)
T 1k3i_A          344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS-------N-------------R-GVAPDAM---  399 (656)
T ss_dssp             GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE-------T-------------T-EECCCCB---
T ss_pred             ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc-------c-------------c-ccCCCCC---
Confidence            0000111123334333         3456666554432111100000       0             0 0000000   


Q ss_pred             hhhhhhheeee---CCCCcEEEEEeCCC-----------eEEEEcCCCCccceee--eccccccEEEEEECCCCCEEEEe
Q psy2671         415 SKHALAKYQAQ---CPEGEKLVSGSDDF-----------TLFLWNPEKEKKSLAR--MTGHQQLINCVEFSPDGRIIASA  478 (573)
Q Consensus       415 ~~~~~~~~~~~---~~~~~~l~sg~~dg-----------~i~lwd~~~~~~~~~~--~~~h~~~v~~v~~sp~g~~las~  478 (573)
                            ...+.   ..++++++.|+.++           .+.+||+.+..-....  .......-.+..+.|+|++++.|
T Consensus       400 ------~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~G  473 (656)
T 1k3i_A          400 ------CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITG  473 (656)
T ss_dssp             ------TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEEC
T ss_pred             ------CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEEC
Confidence                  00000   12466777776432           6778887654321111  00111112345677899999999


Q ss_pred             eCC-----------CcEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeC
Q psy2671         479 SFD-----------KSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       479 s~d-----------g~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~  522 (573)
                      +.+           ..+.+||..+.+....  +........+..+.|||+.++.||.
T Consensus       474 G~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          474 GQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             CBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             CcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            865           4689999887654321  1111112234456799999999885

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.54  E-value=1.2e-05  Score=73.58  Aligned_cols=186  Identities=9%  Similarity=0.050  Sum_probs=120.5

Q ss_pred             EEEEEECCCcEEEEEeC---CCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQ---DRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH  417 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~---d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  417 (573)
                      ...+.+++++.++.++.   +++|+++|..+++....+.-... ....+++.                            
T Consensus        23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~----------------------------   74 (266)
T 2iwa_A           23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL----------------------------   74 (266)
T ss_dssp             EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE----------------------------
T ss_pred             cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe----------------------------
Confidence            56788888777776653   68999999999987765431110 11111111                            


Q ss_pred             hhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe
Q psy2671         418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       418 ~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~  497 (573)
                                .+...++.-.++.+.++|..+.+. +..+.-....  ...+++||+.+.++..++.|.++|..+.+.+..
T Consensus        75 ----------g~~lyv~t~~~~~v~viD~~t~~v-~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~  141 (266)
T 2iwa_A           75 ----------NEKLYQVVWLKNIGFIYDRRTLSN-IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK  141 (266)
T ss_dssp             ----------TTEEEEEETTCSEEEEEETTTTEE-EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred             ----------CCEEEEEEecCCEEEEEECCCCcE-EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence                      123445555778999999886543 3333211111  234567887776666788999999999887776


Q ss_pred             ecCC-----cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCc-------------CCCEEEEEEccCCCEE
Q psy2671         498 LRGH-----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH-------------GDEVYAVDWAPDGEKV  559 (573)
Q Consensus       498 ~~~h-----~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h-------------~~~v~~~~~s~d~~~l  559 (573)
                      +.--     ....+.+.|. +|+..+....++.|.+-|..+++.+..+.-.             ....+.++|+|+++.|
T Consensus       142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l  220 (266)
T 2iwa_A          142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI  220 (266)
T ss_dssp             EECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred             EEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence            6521     1236678888 7766666656889999999999876655321             1356899999998766


Q ss_pred             EEe-eCCCcEE
Q psy2671         560 ASG-GKDKVLR  569 (573)
Q Consensus       560 ~s~-~~d~~i~  569 (573)
                      ..+ ....++.
T Consensus       221 fVTgk~~~~v~  231 (266)
T 2iwa_A          221 FVTGKLWPKLF  231 (266)
T ss_dssp             EEEETTCSEEE
T ss_pred             EEECCCCCeEE
Confidence            544 4455554

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.52  E-value=6.8e-06  Score=87.05  Aligned_cols=298  Identities=13%  Similarity=0.115  Sum_probs=159.7

Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccE---EEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWI---TALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      +..|+.++.++.|..+|..+|+.+.+.........   .+...........+.++..++.|+.|..+|..+++.+.....
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~  145 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeecc
Confidence            45678888889999999999987654321110000   000000000001234677788899999999999988766543


Q ss_pred             CC----ccEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee-
Q psy2671         338 HT----RSVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK-  405 (573)
Q Consensus       338 h~----~~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~-  405 (573)
                      ..    ..+.+ ... .++.++.+..      ++.|..+|..+|+.+-.+.....       .+....     ....+. 
T Consensus       146 ~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~-------~p~~~~-----~~~~~~~  212 (668)
T 1kv9_A          146 TDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPG-------DPALPY-----EHPELRE  212 (668)
T ss_dssp             SCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC-------CTTSCC-----SSHHHHH
T ss_pred             CCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCC-------CCCccc-----ccccccc
Confidence            21    11111 111 1455666543      58999999999987644321000       000000     000000 


Q ss_pred             -eCCCCchhhhhh----hhhheeeeCCCCcEEEEEeCCC-------------------eEEEEcCCCCccceeeecc-cc
Q psy2671         406 -YDPANPEESSKH----ALAKYQAQCPEGEKLVSGSDDF-------------------TLFLWNPEKEKKSLARMTG-HQ  460 (573)
Q Consensus       406 -~~~~~~~~~~~~----~~~~~~~~~~~~~~l~sg~~dg-------------------~i~lwd~~~~~~~~~~~~~-h~  460 (573)
                       .........-..    ..-......+....+..+..++                   .|.-+|..+++..-..... |.
T Consensus       213 ~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~  292 (668)
T 1kv9_A          213 AAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGD  292 (668)
T ss_dssp             HHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC
T ss_pred             ccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCc
Confidence             000000000000    0000011224455666666555                   3888888877654433322 21


Q ss_pred             -------ccEEEEEECCCCC---EEEEeeCCCcEEEEeCCCCeEEEeecCCc------------ceE-------------
Q psy2671         461 -------QLINCVEFSPDGR---IIASASFDKSIKLWDGRIGKFITTLRGHV------------QAV-------------  505 (573)
Q Consensus       461 -------~~v~~v~~sp~g~---~las~s~dg~i~lwd~~~~~~~~~~~~h~------------~~v-------------  505 (573)
                             .+.....+..+|+   .++.++.+|.+.++|..+|+.+...+...            .++             
T Consensus       293 ~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~  372 (668)
T 1kv9_A          293 SWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIV  372 (668)
T ss_dssp             CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEE
T ss_pred             cccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeE
Confidence                   2222223334665   68899999999999999999874332111            000             


Q ss_pred             -----------EEEEECCCCCEEEEE------------------------------------eCCCcEEEEeCCcccccc
Q psy2671         506 -----------YMVAWSSDSRLLVSG------------------------------------SADSTLKVWNMKTKKIEQ  538 (573)
Q Consensus       506 -----------~~v~~s~dg~~las~------------------------------------s~D~~v~vwd~~~~~~~~  538 (573)
                                 ..++++|+..+++..                                    ..++.|..||+.+++.+-
T Consensus       373 ~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W  452 (668)
T 1kv9_A          373 MWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAW  452 (668)
T ss_dssp             ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEE
T ss_pred             ECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEE
Confidence                       015777776665542                                    134789999999998865


Q ss_pred             cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         539 DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       539 ~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..+.+ .......+...+..++.++.|+.++.|+
T Consensus       453 ~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d  485 (668)
T 1kv9_A          453 KVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYS  485 (668)
T ss_dssp             EEEES-SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred             EccCC-CCCcCceeEeCCCEEEEECCcccchhhh
Confidence            54432 2333334555678888999999999886

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.48  E-value=0.00024  Score=65.82  Aligned_cols=250  Identities=10%  Similarity=0.010  Sum_probs=134.3

Q ss_pred             CeEEEEeeCCeEEEEECCCCceec----ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      .+|+.+.. +.|+.+++.......    ..+........+++|.+.    .+..+++....+.|..+++........+..
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~   76 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV----DKVVYWTDISEPSIGRASLHGGEPTTIIRQ   76 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT----TTEEEEEETTTTEEEEEESSSCCCEEEECT
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecC----CCEEEEEECCCCEEEEEecCCCCcEEEEEC
Confidence            44555543 478888876543210    001111123456666542    234556666678999999876544333333


Q ss_pred             CCccEEEEEECCC-cEEEEE-eCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         338 HTRSVTCIRWGGS-GLIYSA-SQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       338 h~~~v~~~~~~~~-~~l~s~-s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      .......+++.+. +.++.+ ...+.|.+++...................+++                           
T Consensus        77 ~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~v---------------------------  129 (267)
T 1npe_A           77 DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVT---------------------------  129 (267)
T ss_dssp             TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE---------------------------
T ss_pred             CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEE---------------------------
Confidence            3346788888763 555544 45678888887532211111110011122222                           


Q ss_pred             hhhhhheeeeCCCCcE-EEEEeC--CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCC
Q psy2671         416 KHALAKYQAQCPEGEK-LVSGSD--DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRI  491 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~-l~sg~~--dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~  491 (573)
                                .|.+.. .++...  .+.|..+++....... .....-.....++++|++..|. +-...+.|..+|...
T Consensus       130 ----------d~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~-~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g  198 (267)
T 1npe_A          130 ----------DPVRGNLYWTDWNRDNPKIETSHMDGTNRRI-LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ  198 (267)
T ss_dssp             ----------ETTTTEEEEEECCSSSCEEEEEETTSCCCEE-EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred             ----------eeCCCEEEEEECCCCCcEEEEEecCCCCcEE-EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence                      242333 333322  3567776654322111 1111223468899999876554 445668899999875


Q ss_pred             CeEEEeecCCcceEEEEEECCCCCEEEEE-eCCCcEEEEeCCcccccccccCcC-CCEEEEEEccCCC
Q psy2671         492 GKFITTLRGHVQAVYMVAWSSDSRLLVSG-SADSTLKVWNMKTKKIEQDLPGHG-DEVYAVDWAPDGE  557 (573)
Q Consensus       492 ~~~~~~~~~h~~~v~~v~~s~dg~~las~-s~D~~v~vwd~~~~~~~~~l~~h~-~~v~~~~~s~d~~  557 (573)
                      ......+.+- .....++..  +..|+.+ ...+.|..+|..+++.+..+.... ...+.+++.|++.
T Consensus       199 ~~~~~~~~~~-~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          199 PGRRKVLEGL-QYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             EEEEEEEECC-CSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             CceEEEecCC-CCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence            4433333322 223455543  4454444 456899999999888777665332 2466788888764

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.45  E-value=0.00033  Score=64.83  Aligned_cols=248  Identities=12%  Similarity=0.011  Sum_probs=135.2

Q ss_pred             eEEEEeCCCeEEEEECCCCeee-----EEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCCceecccccCCccc
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPL-----FKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTGKQIGQPMRGHKQW  294 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~-----~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~~~~~~~~~~h~~~  294 (573)
                      +|..+.. +.|+.+++......     ..+.........++|++++..|+.+. .++.|.+++...+... .........
T Consensus         3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-~~~~~~~~~   80 (267)
T 1npe_A            3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-TIIRQDLGS   80 (267)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-EEECTTCCC
T ss_pred             EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-EEEECCCCC
Confidence            4444443 46777777654210     11111123467899999776666544 5689999998765321 111111234


Q ss_pred             EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCC---CeEEEEeCCCC
Q psy2671         295 ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQD---RTIKVWRASDG  370 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d---~~i~vw~~~~~  370 (573)
                      ..++++.+.    .+..+++....+.|.++++..................+++.+ .+.++.+...   +.|..+++...
T Consensus        81 p~~ia~d~~----~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~  156 (267)
T 1npe_A           81 PEGIALDHL----GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT  156 (267)
T ss_dssp             EEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred             ccEEEEEec----CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence            566666542    234556666678899988864432222222224567888887 5676666543   57777665422


Q ss_pred             eeeEec-cCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC
Q psy2671         371 VMCRTL-EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK  448 (573)
Q Consensus       371 ~~~~~~-~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~  448 (573)
                       ....+ .......+.+++                                     .+++. ..++-...+.|..+++..
T Consensus       157 -~~~~~~~~~~~~P~gia~-------------------------------------d~~~~~lyv~d~~~~~I~~~~~~g  198 (267)
T 1npe_A          157 -NRRILAQDNLGLPNGLTF-------------------------------------DAFSSQLCWVDAGTHRAECLNPAQ  198 (267)
T ss_dssp             -CCEEEECTTCSCEEEEEE-------------------------------------ETTTTEEEEEETTTTEEEEEETTE
T ss_pred             -CcEEEEECCCCCCcEEEE-------------------------------------cCCCCEEEEEECCCCEEEEEecCC
Confidence             11111 011111222222                                     24333 445555667888888764


Q ss_pred             CccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-ceEEEEEECCCCC
Q psy2671         449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-QAVYMVAWSSDSR  515 (573)
Q Consensus       449 ~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-~~v~~v~~s~dg~  515 (573)
                      ... .....+ ......+++. ++.++++...++.|..+|..+++.+..+.... ...+.+++.|++.
T Consensus       199 ~~~-~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          199 PGR-RKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC  263 (267)
T ss_dssp             EEE-EEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred             Cce-EEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence            321 111222 1223566654 34455555566899999999999888775332 2356777787764

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.40  E-value=0.0033  Score=65.56  Aligned_cols=336  Identities=10%  Similarity=0.002  Sum_probs=168.1

Q ss_pred             cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec
Q psy2671         209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG  285 (573)
Q Consensus       209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~  285 (573)
                      ....+++.+.+..|. +-...+.|.+.++............-..-..|++.|.+.+|+.+.+  .+.|...++...... 
T Consensus        85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~-  163 (619)
T 3s94_A           85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-  163 (619)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-
T ss_pred             CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE-
Confidence            567899998665554 4456789999998765332222233334578999997666766554  356766666533221 


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      ......-.+..++++.+.    .++.+.+-+..+.|...|+..........+.......+++..+..+++-...+.|...
T Consensus       164 ~l~~~~~~~P~Glald~~----~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~  239 (619)
T 3s94_A          164 IIINSEIYWPNGLTLDYE----EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILAC  239 (619)
T ss_dssp             EEECSSCSSEEEEEEETT----TTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEE
T ss_pred             EEEeCCCCCCcEEEEEcc----CCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEE
Confidence            111122334566766542    2345555566677888887544332222222223345666666445555567888888


Q ss_pred             eCCCCeeeEeccCCcceeeEEEeccCc-ee-EEEEcC-C----Cceee-CCCCchhhhhhhhhheeeeCCC---------
Q psy2671         366 RASDGVMCRTLEGHAHWVNTLALSTDY-LM-RVEATS-T----GGFKY-DPANPEESSKHALAKYQAQCPE---------  428 (573)
Q Consensus       366 ~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~-~~~~~~-~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------  428 (573)
                      |..+|.....+.........+.+.... .- ...... .    ..+.. .+.         ...+...||.         
T Consensus       240 d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~---------~~~~~C~C~~g~~l~~d~~  310 (619)
T 3s94_A          240 NKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPV---------KPFYQCACPTGVKLLENGK  310 (619)
T ss_dssp             ESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSS---------TTSEEEECCTTCCBCTTSS
T ss_pred             ECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCC---------CCCceEeCCchheecccCc
Confidence            887776554443322222222221100 00 000000 0    00000 000         0011222222         


Q ss_pred             ------CcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEE-EeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         429 ------GEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIA-SASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       429 ------~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                            ..+|+.+ ..+.|+..++.........+. ..-..+..|+|++.+..|. +-...+.|+-++.........+..
T Consensus       311 ~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~  389 (619)
T 3s94_A          311 TCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTA  389 (619)
T ss_dssp             CBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred             ccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEEC
Confidence                  2233333 344566666654322111111 1123467899998555444 444678898888765433233333


Q ss_pred             CcceEEEEEECCCCC-EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEE
Q psy2671         501 HVQAVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV  559 (573)
Q Consensus       501 h~~~v~~v~~s~dg~-~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l  559 (573)
                      .......+++.+.+. +..+-+..+.|.+.++.+......+...-....++++.|...+|
T Consensus       390 ~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~l  449 (619)
T 3s94_A          390 QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYM  449 (619)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEE
T ss_pred             CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcE
Confidence            333456778876444 45555567889999887543211112223456778888763343

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.39  E-value=4.6e-05  Score=68.83  Aligned_cols=181  Identities=9%  Similarity=0.093  Sum_probs=114.1

Q ss_pred             EEEEEECCCcEEEEEeCCC--eEEEEeCCCCeeeEeccCCcce-eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDR--TIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~--~i~vw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ...+.|++...+.+.+.+|  +|+.+|+.+++....+...... -..+++.                             
T Consensus        45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-----------------------------   95 (262)
T 3nol_A           45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-----------------------------   95 (262)
T ss_dssp             EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-----------------------------
T ss_pred             cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-----------------------------
Confidence            3567777433445556655  8999999999877655322110 0011110                             


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                               .+...+....++.+.+||..+.+. +..+.-..   ....+++|++.|+.+..++.|.++|..+.+.+..+
T Consensus        96 ---------g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I  162 (262)
T 3nol_A           96 ---------KDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTI  162 (262)
T ss_dssp             ---------TTEEEEEESSSSEEEEEETTTCCE-EEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred             ---------CCEEEEEEeeCCEEEEEECccCcE-EEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence                     123344445688999999887543 33332211   12334467777776666788999999999887775


Q ss_pred             cCC--c---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC------------cCCCEEEEEEccCCCEEEE
Q psy2671         499 RGH--V---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG------------HGDEVYAVDWAPDGEKVAS  561 (573)
Q Consensus       499 ~~h--~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~------------h~~~v~~~~~s~d~~~l~s  561 (573)
                      .-.  .   ..++.+.|. +|+..|..-.++.|.+.|.++++.+..+.-            -.+-.+.++|+|+++.|..
T Consensus       163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV  241 (262)
T 3nol_A          163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV  241 (262)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred             EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence            431  1   335567776 777666665788999999999987544321            1235689999999888877


Q ss_pred             eeCC
Q psy2671         562 GGKD  565 (573)
Q Consensus       562 ~~~d  565 (573)
                      .|+.
T Consensus       242 TGK~  245 (262)
T 3nol_A          242 TGKL  245 (262)
T ss_dssp             EETT
T ss_pred             ECCC
Confidence            7754

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.38  E-value=5.5e-05  Score=68.30  Aligned_cols=179  Identities=7%  Similarity=0.003  Sum_probs=115.7

Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcc-eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH-WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      ...+.+.+...+.+.+.++.|+.+|+.+++....+ -... +-..+++                                
T Consensus        57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--------------------------------  103 (268)
T 3nok_A           57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--------------------------------  103 (268)
T ss_dssp             EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--------------------------------
T ss_pred             cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--------------------------------
Confidence            35677776556677788899999999998776544 1110 0011111                                


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG  500 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~  500 (573)
                            -.+...+....++.+.+||..+.+. +..+....+   ...+++|++.|+.+..++.|.++|..+.+.+..+.-
T Consensus       104 ------~g~~Ly~ltw~~~~v~V~D~~Tl~~-~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V  173 (268)
T 3nok_A          104 ------DGERLYQLTWTEGLLFTWSGMPPQR-ERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV  173 (268)
T ss_dssp             ------CSSCEEEEESSSCEEEEEETTTTEE-EEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             ------eCCEEEEEEccCCEEEEEECCcCcE-EEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence                  1123444555788999999887543 333322111   123346778777777789999999999988776643


Q ss_pred             --Cc---ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC-------------cCCCEEEEEEccCCCEEEEe
Q psy2671         501 --HV---QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG-------------HGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       501 --h~---~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~-------------h~~~v~~~~~s~d~~~l~s~  562 (573)
                        +.   ..++.+.|. +|+..|..-.++.|.+-|.++++.+..+.-             -.+-.+.++|.|+++.|...
T Consensus       174 ~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT  252 (268)
T 3nok_A          174 KLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT  252 (268)
T ss_dssp             EETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred             CCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence              21   235667777 776666555788999999999886544321             12356899999987777666


Q ss_pred             eC
Q psy2671         563 GK  564 (573)
Q Consensus       563 ~~  564 (573)
                      |+
T Consensus       253 GK  254 (268)
T 3nok_A          253 GK  254 (268)
T ss_dssp             ET
T ss_pred             CC
Confidence            54

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.38  E-value=0.00021  Score=65.25  Aligned_cols=194  Identities=12%  Similarity=0.108  Sum_probs=125.5

Q ss_pred             EEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCC-ccEEEEEECCCcEEEEE-eCCCeEEEEeCCCC
Q psy2671         295 ITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSGLIYSA-SQDRTIKVWRASDG  370 (573)
Q Consensus       295 v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~-s~d~~i~vw~~~~~  370 (573)
                      ..++.|.+     ++..+++.+.  ++.|++.|+.+++.+..+.... .....+++.++ .++.+ -.++.+.++|..+.
T Consensus        23 ~~Gl~~~~-----dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~-~lyv~t~~~~~v~viD~~t~   96 (266)
T 2iwa_A           23 TQGLVYAE-----NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNE-KLYQVVWLKNIGFIYDRRTL   96 (266)
T ss_dssp             EEEEEECS-----TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT-EEEEEETTCSEEEEEETTTT
T ss_pred             cccEEEeC-----CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCC-EEEEEEecCCEEEEEECCCC
Confidence            45666654     3455666554  6799999999998887764222 12234555544 45444 45789999999988


Q ss_pred             eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       371 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                      +.+.++..-.         +..                              ...+++|..+..+..++++.++|+++.+
T Consensus        97 ~v~~~i~~g~---------~~g------------------------------~glt~Dg~~l~vs~gs~~l~viD~~t~~  137 (266)
T 2iwa_A           97 SNIKNFTHQM---------KDG------------------------------WGLATDGKILYGSDGTSILYEIDPHTFK  137 (266)
T ss_dssp             EEEEEEECCS---------SSC------------------------------CEEEECSSSEEEECSSSEEEEECTTTCC
T ss_pred             cEEEEEECCC---------CCe------------------------------EEEEECCCEEEEECCCCeEEEEECCCCc
Confidence            7766553110         000                              0112445666666678899999998754


Q ss_pred             cceeeecc-cc---ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc-------------ceEEEEEECCC
Q psy2671         451 KSLARMTG-HQ---QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV-------------QAVYMVAWSSD  513 (573)
Q Consensus       451 ~~~~~~~~-h~---~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~-------------~~v~~v~~s~d  513 (573)
                      ..-....+ ..   ..++.+.|. +|++.+....++.|.+.|..+++.+..+....             ...+.++|+|+
T Consensus       138 v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~  216 (266)
T 2iwa_A          138 LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE  216 (266)
T ss_dssp             EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred             EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence            32222211 11   136778888 77777666678899999999999888775321             24589999999


Q ss_pred             CCE-EEEEeCCCcEEEEeCCcc
Q psy2671         514 SRL-LVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       514 g~~-las~s~D~~v~vwd~~~~  534 (573)
                      ++. ++++...+.+.+-++...
T Consensus       217 ~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          217 NKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             TTEEEEEETTCSEEEEEEEEEC
T ss_pred             CCEEEEECCCCCeEEEEEEecc
Confidence            875 555657788888887554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.35  E-value=4.5e-05  Score=82.08  Aligned_cols=195  Identities=14%  Similarity=0.126  Sum_probs=112.8

Q ss_pred             Cccc-cEEEEEEc-CCCCeeEEee-----CCCcEEEeeccCC-cceeeecCCCeeeeecccccccccccccCCCCCCccc
Q psy2671         108 GHAE-AVISVKFS-PNGRSLASGS-----GDTTVRFWDVTTQ-TPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEE  179 (573)
Q Consensus       108 gH~~-~V~~l~~s-~~~~~lat~s-----~D~~vrvWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (573)
                      +|.- .+.+.+|| |||++||-+.     ...+|+++|+.++ +.+..                               .
T Consensus       170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------------------------------~  218 (751)
T 2xe4_A          170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------------------------------K  218 (751)
T ss_dssp             TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------------------------C
T ss_pred             CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------------------------c
Confidence            4554 78899999 9999888432     2236999999887 42200                               0


Q ss_pred             eEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCC-----CeEEEEECCCCee--eEEec-CCCCc
Q psy2671         180 VVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD-----TTVRFWDVTTQTP--LFKCE-GHKHW  251 (573)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d-----~~i~iwd~~~~~~--~~~~~-~h~~~  251 (573)
                                             +   ......++|+|||+.|+....|     ..|.++++.++..  ...+. .....
T Consensus       219 -----------------------~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~  272 (751)
T 2xe4_A          219 -----------------------V---SGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLF  272 (751)
T ss_dssp             -----------------------E---EEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTC
T ss_pred             -----------------------c---cCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCce
Confidence                                   0   0001256799999988877665     3688888877531  12222 23345


Q ss_pred             EEEEEEcCCCCeEEEEeeC---CeEEEEECCCCce-e--cccccCCcccEEEEEecccccCCCCCEEE-EEeCC--C--c
Q psy2671         252 VLCIAWSPDSKQLVSGCKN---GVIHAWDSSTGKQ-I--GQPMRGHKQWITALSWEPFHLNHQCRRFA-SSGKD--G--A  320 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~d---g~i~vwd~~~~~~-~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~-s~~~d--g--~  320 (573)
                      ...+.|||||++|+..+.+   ..|.++|+.++.. .  .....+.......+.|.      .++.|+ ....+  +  .
T Consensus       273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~------~g~~l~~~t~~~~a~~~~  346 (751)
T 2xe4_A          273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH------GTSHLVILTNEGGAVNHK  346 (751)
T ss_dssp             EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE------TTTEEEEEECTTTCTTCE
T ss_pred             EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee------eCCEEEEEeCCCCCCCcE
Confidence            6788999999998866543   4688889877521 1  12222233333333321      234443 33333  2  4


Q ss_pred             EEEEECCC-CeEEE-EecCCC-ccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         321 IRIWDVIL-SQCVR-VLTSHT-RSVTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       321 v~iwd~~~-~~~~~-~~~~h~-~~v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      |..+++.. +.... .+.... ..+..+.+.++..+++...++..++|
T Consensus       347 L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~  394 (751)
T 2xe4_A          347 LLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIW  394 (751)
T ss_dssp             EEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEE
T ss_pred             EEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEE
Confidence            55566654 22222 222222 24566777766677788888866555

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.35  E-value=0.0014  Score=61.91  Aligned_cols=235  Identities=12%  Similarity=0.061  Sum_probs=125.6

Q ss_pred             CcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC-C-cEEEEECC
Q psy2671         250 HWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD-G-AIRIWDVI  327 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d-g-~v~iwd~~  327 (573)
                      .....++|+++|+.+++...++.|..||..........   ......++++.+     +++.+++.... + .|..++..
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~---~~~~p~gia~~~-----dG~l~vad~~~~~~~v~~~d~~  103 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT---VEGKVSGLAFTS-----NGDLVATGWNADSIPVVSLVKS  103 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE---CSSEEEEEEECT-----TSCEEEEEECTTSCEEEEEECT
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe---CCCCceeEEEcC-----CCcEEEEeccCCcceEEEEcCC
Confidence            34678999999986666667889999998654221111   123456666654     55655554332 2 36666766


Q ss_pred             CCeEEEEecC-CCccEEEEEECCCcEEEEEe-CCCeEEEEeCCCCee-eEeccCCcceeeEEEeccCceeEEEEcCCCce
Q psy2671         328 LSQCVRVLTS-HTRSVTCIRWGGSGLIYSAS-QDRTIKVWRASDGVM-CRTLEGHAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       328 ~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      +++....... .......++...++.++... .++.|..+|...+.. +....+...        .              
T Consensus       104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~--------~--------------  161 (306)
T 2p4o_A          104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLA--------R--------------  161 (306)
T ss_dssp             TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGS--------C--------------
T ss_pred             CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccc--------c--------------
Confidence            6654332211 11222334434445545444 577777777654321 100000000        0              


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCC-Cccc-eeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEK-EKKS-LARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~-~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                       .....       ........++++. ++++-...+.|..+++.. +... ...+. .......++++++|+++++....
T Consensus       162 -~~~~~-------~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~  232 (306)
T 2p4o_A          162 -SNSES-------VFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIY  232 (306)
T ss_dssp             -SSTTC-------CSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTT
T ss_pred             -ccccC-------CCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCC
Confidence             00000       0000000124454 445555678899998764 2110 11111 01224568999999988887778


Q ss_pred             CcEEEEeCCCCeEEE--eecCCcceEEEEEEC---CCCCEEEEEeCCC
Q psy2671         482 KSIKLWDGRIGKFIT--TLRGHVQAVYMVAWS---SDSRLLVSGSADS  524 (573)
Q Consensus       482 g~i~lwd~~~~~~~~--~~~~h~~~v~~v~~s---~dg~~las~s~D~  524 (573)
                      +.|.++|.. ++...  .+.......++++|.   ||++.|+.++..+
T Consensus       233 ~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          233 NSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             CeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence            899999975 65532  333333567899999   8988777665543

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.34  E-value=1.4e-05  Score=80.85  Aligned_cols=250  Identities=9%  Similarity=0.048  Sum_probs=139.4

Q ss_pred             CCCEE-EEEeCCCcEEEEECCCCeEEEEecC-CCccEEEEEE-C-CC-cEEEEEe------------------CCCeEEE
Q psy2671         308 QCRRF-ASSGKDGAIRIWDVILSQCVRVLTS-HTRSVTCIRW-G-GS-GLIYSAS------------------QDRTIKV  364 (573)
Q Consensus       308 ~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~~~~-~-~~-~~l~s~s------------------~d~~i~v  364 (573)
                      +++++ ++...++.|.+.|+.+.++.+.+.- .......+++ . ++ +.++.++                  .++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            34443 4445566799999999988875542 2245677776 2 44 4677764                  2457888


Q ss_pred             EeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCcee--e---CCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         365 WRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK--Y---DPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       365 w~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      .|..+.+....+.--. .-..++++++.........+....  .   ..............+.....++|+....    +
T Consensus       180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i----~  254 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL----N  254 (595)
T ss_dssp             EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE----T
T ss_pred             EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE----C
Confidence            8888876665543211 123455666654444333221100  0   0000000000000000001123433322    5


Q ss_pred             eEEEEcCCC--CccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCCe------------EEEeecCCcce
Q psy2671         440 TLFLWNPEK--EKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIGK------------FITTLRGHVQA  504 (573)
Q Consensus       440 ~i~lwd~~~--~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~~------------~~~~~~~h~~~  504 (573)
                      .|.+.|.++  ....+..+.- .....++.++|||+++++++ .+.+|.++|..+.+            ....+.-- ..
T Consensus       255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~g  332 (595)
T 1fwx_A          255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LG  332 (595)
T ss_dssp             TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SC
T ss_pred             cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CC
Confidence            599999886  3221233322 23457899999999776654 78899999988653            22333221 34


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCc----------ccccccccCcCCCE-----EEEEEccCCCEEEEeeC
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKT----------KKIEQDLPGHGDEV-----YAVDWAPDGEKVASGGK  564 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~----------~~~~~~l~~h~~~v-----~~~~~s~d~~~l~s~~~  564 (573)
                      -..++|+|||...++.-.|+.|.+||+.+          .+.+..+.-|-.+-     .++..+|||++|++...
T Consensus       333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk  407 (595)
T 1fwx_A          333 PLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK  407 (595)
T ss_dssp             EEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred             cceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence            67889999994444566899999999976          33444554443321     12345899999988643

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.32  E-value=0.00027  Score=67.49  Aligned_cols=235  Identities=9%  Similarity=0.067  Sum_probs=130.2

Q ss_pred             EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc----------C--------CcccEEEEEecccccCCCCCEEE
Q psy2671         252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR----------G--------HKQWITALSWEPFHLNHQCRRFA  313 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~----------~--------h~~~v~~~~~~~~~~~~~~~~l~  313 (573)
                      -.+++|+++|+.++++..++.|..|+..++........          +        ......++++.+    .++ .|.
T Consensus        21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~----~~g-~l~   95 (322)
T 2fp8_A           21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL----QNN-QLY   95 (322)
T ss_dssp             CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET----TTT-EEE
T ss_pred             ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcC----CCC-cEE
Confidence            45688999998788888899999999876543210000          0        012356666543    123 444


Q ss_pred             EEeCCCcEEEEECCCCeEEEEecC-----CCccEEEEEECC-CcEEEEEeCC------------------CeEEEEeCCC
Q psy2671         314 SSGKDGAIRIWDVILSQCVRVLTS-----HTRSVTCIRWGG-SGLIYSASQD------------------RTIKVWRASD  369 (573)
Q Consensus       314 s~~~dg~v~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~-~~~l~s~s~d------------------~~i~vw~~~~  369 (573)
                      .+...+.+..+|...+.. ..+..     .......+++.+ ++.++.+...                  +.|..++..+
T Consensus        96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~  174 (322)
T 2fp8_A           96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST  174 (322)
T ss_dssp             EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred             EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence            454455588888765432 22211     112356788887 7766665432                  4455555544


Q ss_pred             CeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EEeCCCeEEEEcCCC
Q psy2671         370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SGSDDFTLFLWNPEK  448 (573)
Q Consensus       370 ~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg~~dg~i~lwd~~~  448 (573)
                      +.......+ ....+.                                     .+..+++..|. +-...+.|..|++..
T Consensus       175 ~~~~~~~~~-~~~p~g-------------------------------------ia~~~dg~~lyv~d~~~~~I~~~~~~~  216 (322)
T 2fp8_A          175 KETTLLLKE-LHVPGG-------------------------------------AEVSADSSFVLVAEFLSHQIVKYWLEG  216 (322)
T ss_dssp             TEEEEEEEE-ESCCCE-------------------------------------EEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred             CEEEEeccC-CccCcc-------------------------------------eEECCCCCEEEEEeCCCCeEEEEECCC
Confidence            432111000 000011                                     12346666544 445568888888764


Q ss_pred             Ccc-ceeeeccccccEEEEEECCCCCEEEEeeC----------CCcEEEEeCCCCeEEEeecCC----cceEEEEEECCC
Q psy2671         449 EKK-SLARMTGHQQLINCVEFSPDGRIIASASF----------DKSIKLWDGRIGKFITTLRGH----VQAVYMVAWSSD  513 (573)
Q Consensus       449 ~~~-~~~~~~~h~~~v~~v~~sp~g~~las~s~----------dg~i~lwd~~~~~~~~~~~~h----~~~v~~v~~s~d  513 (573)
                      ... ....+..... ...++++++|++.++...          .+.|..+|.. ++.+..+...    ...+..+++ .+
T Consensus       217 ~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~  293 (322)
T 2fp8_A          217 PKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HD  293 (322)
T ss_dssp             TTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ET
T ss_pred             CcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eC
Confidence            211 1111111122 678999999997776544          4678888874 6666655432    234556666 46


Q ss_pred             CCEEEEEeCCCcEEEEeCCc
Q psy2671         514 SRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~  533 (573)
                      +++.++....+.|..+++..
T Consensus       294 g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          294 GLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             TEEEEECSSCSEEEEEEC--
T ss_pred             CEEEEeecCCCceEEEeccc
Confidence            66666666778899888753

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.30  E-value=0.00012  Score=75.95  Aligned_cols=303  Identities=11%  Similarity=0.075  Sum_probs=151.7

Q ss_pred             CCeEEEEee-CCeEEEEEC-CCCceecccccCCcccEE------EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         261 SKQLVSGCK-NGVIHAWDS-STGKQIGQPMRGHKQWIT------ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       261 g~~l~sgs~-dg~i~vwd~-~~~~~~~~~~~~h~~~v~------~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      +..++.++. ++.|.-+|. .+|+.+.+........+.      .+...|   ...+.++..++.|+.+..+|..+++.+
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~v~~~dg~l~alD~~tG~~~  138 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGL---AYGAGQIVKKQANGHLLALDAKTGKIN  138 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCC---EEETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcccccccccccccccc---EEECCEEEEEeCCCEEEEEECCCCCEE
Confidence            445666666 788888888 888776442211110000      000001   012356777888999999999999877


Q ss_pred             EEecCCC--c--cEEE-EEECCCcEEEEEeC------CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEc--
Q psy2671         333 RVLTSHT--R--SVTC-IRWGGSGLIYSASQ------DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEAT--  399 (573)
Q Consensus       333 ~~~~~h~--~--~v~~-~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~--  399 (573)
                      .......  .  .+.+ ... .++.++.++.      ++.|..+|..+|+..-.+........ ....+.........  
T Consensus       139 W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~-~~~~p~~~~~~~~~G~  216 (571)
T 2ad6_A          139 WEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDS-VRLAKDFNSANPHYGQ  216 (571)
T ss_dssp             EEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHH-HTBCTTTTTTCGGGCC
T ss_pred             EEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccc-cccCcccccccccccc
Confidence            6543211  0  1111 111 1456777665      78999999999887644322110000 00000000000000  


Q ss_pred             -CCCceeeCCCCchhhhhhh-hhheeeeCCCCcEEEEEeC------------C----CeEEEEcCCCCccceeeecc-c-
Q psy2671         400 -STGGFKYDPANPEESSKHA-LAKYQAQCPEGEKLVSGSD------------D----FTLFLWNPEKEKKSLARMTG-H-  459 (573)
Q Consensus       400 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~sg~~------------d----g~i~lwd~~~~~~~~~~~~~-h-  459 (573)
                       ..+...|.. . ....... .-......+....+..+..            |    +.|..+|..+++..-..... | 
T Consensus       217 ~~~g~~~w~~-~-~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d  294 (571)
T 2ad6_A          217 FGLGTKTWEG-D-AWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD  294 (571)
T ss_dssp             SSHHHHTSST-T-GGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccCcc-c-ceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence             000000000 0 0000000 0000011122233333332            1    35777777766543322221 1 


Q ss_pred             -------cccEEEEEECCCCC---EEEEeeCCCcEEEEeCCCCeEEEeecCCc-------------ceE-----------
Q psy2671         460 -------QQLINCVEFSPDGR---IIASASFDKSIKLWDGRIGKFITTLRGHV-------------QAV-----------  505 (573)
Q Consensus       460 -------~~~v~~v~~sp~g~---~las~s~dg~i~lwd~~~~~~~~~~~~h~-------------~~v-----------  505 (573)
                             ..++ -+...++|+   .++.++.+|.+.++|..+|+.+...+...             .++           
T Consensus       295 ~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~  373 (571)
T 2ad6_A          295 EWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH  373 (571)
T ss_dssp             SSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred             ccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence                   1222 123335774   67788999999999999998876543211             111           


Q ss_pred             ---------------EEEEECCCCCEEEEEe-------------------------------------CCCcEEEEeCCc
Q psy2671         506 ---------------YMVAWSSDSRLLVSGS-------------------------------------ADSTLKVWNMKT  533 (573)
Q Consensus       506 ---------------~~v~~s~dg~~las~s-------------------------------------~D~~v~vwd~~~  533 (573)
                                     ..++++|+..+|+..+                                     .++.|..||+.+
T Consensus       374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t  453 (571)
T 2ad6_A          374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT  453 (571)
T ss_dssp             CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred             CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence                           1357888877776653                                     357899999999


Q ss_pred             ccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       534 ~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++.+-..+.. ..+.+......+..++.++.|+.|+.|+
T Consensus       454 G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D  491 (571)
T 2ad6_A          454 GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALD  491 (571)
T ss_dssp             CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred             CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEE
Confidence            8876554321 2222222333456777788899888875

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.30  E-value=0.00056  Score=70.90  Aligned_cols=83  Identities=16%  Similarity=0.148  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceE-EEEEECCCCC
Q psy2671         437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAV-YMVAWSSDSR  515 (573)
Q Consensus       437 ~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v-~~v~~s~dg~  515 (573)
                      .+|.+.-||+.+++..-....+.  .+..-.....+.+++.|+.||.++.||.++|+.+..++...... .-+.+..+|+
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~  541 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred             CcceEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence            36889999998876543322221  11111112245678889999999999999999998876432211 1245556776


Q ss_pred             -EEEEEe
Q psy2671         516 -LLVSGS  521 (573)
Q Consensus       516 -~las~s  521 (573)
                       |+++.+
T Consensus       542 qYv~~~~  548 (582)
T 1flg_A          542 QYLGVTV  548 (582)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence             444443

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.29  E-value=0.00013  Score=77.28  Aligned_cols=272  Identities=11%  Similarity=0.087  Sum_probs=141.8

Q ss_pred             EEEEcC-CCCeEEEEeeCC-----------eEEEEECCCCceecc-cc-cCCcccEEEEEecccccCCCCCEEEEEeC-C
Q psy2671         254 CIAWSP-DSKQLVSGCKNG-----------VIHAWDSSTGKQIGQ-PM-RGHKQWITALSWEPFHLNHQCRRFASSGK-D  318 (573)
Q Consensus       254 ~v~~s~-dg~~l~sgs~dg-----------~i~vwd~~~~~~~~~-~~-~~h~~~v~~~~~~~~~~~~~~~~l~s~~~-d  318 (573)
                      ++++.+ +++.++.|+.+.           .+.+||+.+++-... .+ ..+.....+.++     ..+++.++.||. +
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~-----~~~g~lyv~GG~~~  264 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM-----DGNGQIVVTGGNDA  264 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE-----CTTSCEEEECSSST
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC-----CCCCCEEEeCCCCC
Confidence            456677 888888877543           588999987653211 01 111111112221     135678888884 5


Q ss_pred             CcEEEEECCCCeEEEEecCCCcc-EEEEEECCCc-EEEEEe-CC-----CeEEEEeCCCCeeeEeccCCcceeeEEEecc
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSG-LIYSAS-QD-----RTIKVWRASDGVMCRTLEGHAHWVNTLALST  390 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~-~l~s~s-~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~  390 (573)
                      ..+.+||..+.+....-..+... -.+++..+++ +++.|+ .+     ..+.+||..++.....-......        
T Consensus       265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p--------  336 (656)
T 1k3i_A          265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP--------  336 (656)
T ss_dssp             TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG--------
T ss_pred             CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc--------
Confidence            68999999877655432222211 1233333334 555565 34     46778887765432110000000        


Q ss_pred             CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC---------CeEEEEcCCCCccceeeeccc--
Q psy2671         391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD---------FTLFLWNPEKEKKSLARMTGH--  459 (573)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d---------g~i~lwd~~~~~~~~~~~~~h--  459 (573)
                                       .....   ..     .....++..++.|+.+         ..+..||+.+..... ....+  
T Consensus       337 -----------------~~~~~---~~-----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~-~~~~~~~  390 (656)
T 1k3i_A          337 -----------------MLTAD---KQ-----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK-SAGKRQS  390 (656)
T ss_dssp             -----------------GCCCC---TT-----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE-EEEECEE
T ss_pred             -----------------ccccc---cc-----ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee-cCCcccc
Confidence                             00000   00     0001223344444433         356778876543211 11111  


Q ss_pred             -------cccEEEEEEC-CCCCEEEEeeCCC-----------cEEEEeCCCCeEEEee--cCCcceE-EEEEECCCCCEE
Q psy2671         460 -------QQLINCVEFS-PDGRIIASASFDK-----------SIKLWDGRIGKFITTL--RGHVQAV-YMVAWSSDSRLL  517 (573)
Q Consensus       460 -------~~~v~~v~~s-p~g~~las~s~dg-----------~i~lwd~~~~~~~~~~--~~h~~~v-~~v~~s~dg~~l  517 (573)
                             ...-.++.|. .++++++.|+.++           .+.+||..+.+.....  ..+.... .+++..|+|+++
T Consensus       391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~  470 (656)
T 1k3i_A          391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF  470 (656)
T ss_dssp             TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE
T ss_pred             ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEE
Confidence                   1122445554 3788899988643           6888998876654332  2122222 344667899999


Q ss_pred             EEEeCC-----------CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         518 VSGSAD-----------STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       518 as~s~D-----------~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      +.|+.+           ..+.+||..+.+-  +..+........+..+.||++.++.||.
T Consensus       471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~  530 (656)
T 1k3i_A          471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG  530 (656)
T ss_dssp             EECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             EECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence            999864           4689999877542  2222222222234556799999999885

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.26  E-value=0.00015  Score=73.35  Aligned_cols=131  Identities=13%  Similarity=0.123  Sum_probs=84.8

Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCC-----------------------------------
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK-----------------------------------  482 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg-----------------------------------  482 (573)
                      ++.+-+.|.++.+.......+-  .-..++++|+|+++++.+.+.                                   
T Consensus       174 ~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~  251 (595)
T 1fwx_A          174 VNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ  251 (595)
T ss_dssp             EEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred             CceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence            3467777877643322222221  234578899999988887653                                   


Q ss_pred             ---cEEEEeCCC--CeE-EEeecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCccc------------ccccccCc
Q psy2671         483 ---SIKLWDGRI--GKF-ITTLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKK------------IEQDLPGH  543 (573)
Q Consensus       483 ---~i~lwd~~~--~~~-~~~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~------------~~~~l~~h  543 (573)
                         .|.+.|.++  ++. +..+..- ....++.++|||+++++++ .+.+|.++|+.+.+            ....+.- 
T Consensus       252 ~i~~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-  329 (595)
T 1fwx_A          252 ELNGVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-  329 (595)
T ss_dssp             EETTEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-
T ss_pred             EECcEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-
Confidence               366677766  433 3333221 1234689999999877665 68899999998653            1222322 


Q ss_pred             CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         544 GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       544 ~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ...-..++|+|||...++.-.|+.|..|+
T Consensus       330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwd  358 (595)
T 1fwx_A          330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWN  358 (595)
T ss_dssp             CSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             CCCcceEEECCCCeEEEEEecCCcEEEEE
Confidence            23567899999995456778899999896

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.25  E-value=0.00036  Score=62.38  Aligned_cols=180  Identities=10%  Similarity=0.100  Sum_probs=113.0

Q ss_pred             EEEEEECCCcEEEEEeCC--CeEEEEeCCCCeeeEeccCCcce-eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQD--RTIKVWRASDGVMCRTLEGHAHW-VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ...+.|.++..+.+.+.+  ..|+.+|+.+++........... -..+++.                             
T Consensus        23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-----------------------------   73 (243)
T 3mbr_X           23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-----------------------------   73 (243)
T ss_dssp             EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-----------------------------
T ss_pred             cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-----------------------------
Confidence            456777764444555554  48999999999887655322110 0111111                             


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                               .+...+....++.+.+||..+.+. +.++.....   ...+.++++.|..+..++.|.++|..+.+.+..+
T Consensus        74 ---------~~~ly~ltw~~~~v~v~D~~tl~~-~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I  140 (243)
T 3mbr_X           74 ---------RDRLIQLTWRNHEGFVYDLATLTP-RARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI  140 (243)
T ss_dssp             ---------TTEEEEEESSSSEEEEEETTTTEE-EEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred             ---------CCEEEEEEeeCCEEEEEECCcCcE-EEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence                     123444556788999999877543 333322111   1233456766666666889999999999887766


Q ss_pred             cCCc-----ceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc-------------CcCCCEEEEEEccCCCEEE
Q psy2671         499 RGHV-----QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-------------GHGDEVYAVDWAPDGEKVA  560 (573)
Q Consensus       499 ~~h~-----~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~-------------~h~~~v~~~~~s~d~~~l~  560 (573)
                      .-..     ..++.+.+. +|+..|..-.+..|.+-|.++++.+..+.             .-.+-.+.++|+|+++.|.
T Consensus       141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf  219 (243)
T 3mbr_X          141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF  219 (243)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred             EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence            4321     245666665 67666555567899999999988654332             1123568999999988877


Q ss_pred             EeeC
Q psy2671         561 SGGK  564 (573)
Q Consensus       561 s~~~  564 (573)
                      ..|+
T Consensus       220 VTGK  223 (243)
T 3mbr_X          220 VTGK  223 (243)
T ss_dssp             EEET
T ss_pred             EECC
Confidence            7664

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.22  E-value=0.00024  Score=64.08  Aligned_cols=172  Identities=17%  Similarity=0.186  Sum_probs=111.9

Q ss_pred             CCEEEEEeCCC--cEEEEECCCCeEEEEecCCCcc-EEEEEECCCcEEEEEe-CCCeEEEEeCCCCeeeEeccCCcceee
Q psy2671         309 CRRFASSGKDG--AIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVN  384 (573)
Q Consensus       309 ~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~  384 (573)
                      +..+.+.|.+|  .|+.+|+.+++.+..+...... -..+...++ .++... .++.+.++|..+.+.+.++.-.... .
T Consensus        53 ~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~-~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG-~  130 (262)
T 3nol_A           53 GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKD-KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG-W  130 (262)
T ss_dssp             TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETT-EEEEEESSSSEEEEEETTTCCEEEEEECSSCC-C
T ss_pred             CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCC-EEEEEEeeCCEEEEEECccCcEEEEEECCCCc-e
Confidence            45677777776  8999999999888776543322 123444444 455444 5889999999988877665421100 0


Q ss_pred             EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec---ccc-
Q psy2671         385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT---GHQ-  460 (573)
Q Consensus       385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~---~h~-  460 (573)
                                                             ..++++..|+....++.|.++|+.+.+..-....   +.. 
T Consensus       131 ---------------------------------------glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~  171 (262)
T 3nol_A          131 ---------------------------------------GLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEEL  171 (262)
T ss_dssp             ---------------------------------------CEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEEC
T ss_pred             ---------------------------------------EEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccc
Confidence                                                   1123455566655678899999987543222111   111 


Q ss_pred             ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC------------cceEEEEEECCCCCEEEEEeC
Q psy2671         461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH------------VQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       461 ~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h------------~~~v~~v~~s~dg~~las~s~  522 (573)
                      ..++.+.+. +|++.|..-.+..|.+.|.++++.+..+...            ..-.+.+||+|+++.|...++
T Consensus       172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            335567776 7877776667889999999999988776431            124588999999887777764

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.16  E-value=0.0053  Score=57.92  Aligned_cols=230  Identities=11%  Similarity=0.057  Sum_probs=122.7

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-C-eEEEEECCCCceec
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-G-VIHAWDSSTGKQIG  285 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g-~i~vwd~~~~~~~~  285 (573)
                      .....++|+|+|+.+++-..++.|..||..+... .... .......++++++|+.+++.... + .|..++..+++...
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            4567899999998777766889999999876432 2222 22457899999999855544332 2 47677777765321


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeE-EEEe---------cCCCccEEEEEECCCcEEEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC-VRVL---------TSHTRSVTCIRWGGSGLIYS  355 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~---------~~h~~~v~~~~~~~~~~l~s  355 (573)
                      ............++.     ...+..+++...++.|..+|...++. +...         ...-.....+...+...+++
T Consensus       110 ~~~~~~~~~~~g~~~-----~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~  184 (306)
T 2p4o_A          110 LLTLPDAIFLNGITP-----LSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS  184 (306)
T ss_dssp             EEECTTCSCEEEEEE-----SSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred             EEeCCCccccCcccc-----cCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEE
Confidence            100011111222221     11223445444688888888765421 1110         01112234442222223444


Q ss_pred             EeCCCeEEEEeCCC-CeeeEeccCCcceeeEEE--eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEE
Q psy2671         356 ASQDRTIKVWRASD-GVMCRTLEGHAHWVNTLA--LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL  432 (573)
Q Consensus       356 ~s~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  432 (573)
                      -+..+.|..++... +...     .   ...+.  ..++                              -.+..++|.+.
T Consensus       185 d~~~~~I~~~~~~~~g~~~-----~---~~~~~~~~~P~------------------------------gi~vd~dG~l~  226 (306)
T 2p4o_A          185 NTEKMLLLRIPVDSTDKPG-----E---PEIFVEQTNID------------------------------DFAFDVEGNLY  226 (306)
T ss_dssp             ETTTTEEEEEEBCTTSCBC-----C---CEEEEESCCCS------------------------------SEEEBTTCCEE
T ss_pred             eCCCCEEEEEEeCCCCCCC-----c---cEEEeccCCCC------------------------------CeEECCCCCEE
Confidence            45677888888764 2210     0   00000  0000                              11233667777


Q ss_pred             EEEeCCCeEEEEcCCCCccceeeeccccccEEEEEEC---CCCCEEEEeeCCC
Q psy2671         433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFS---PDGRIIASASFDK  482 (573)
Q Consensus       433 ~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~s---p~g~~las~s~dg  482 (573)
                      ++....+.|.+++.......+..+...-...++++|.   |+++.|..++..+
T Consensus       227 va~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          227 GATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             EECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             EEeCCCCeEEEECCCCCEEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence            7777778899999753221122222222457899998   8887776665443

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.14  E-value=0.00051  Score=62.00  Aligned_cols=171  Identities=17%  Similarity=0.139  Sum_probs=112.5

Q ss_pred             CCEEEEEeCCCcEEEEECCCCeEEEEecCCCc-cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEE
Q psy2671         309 CRRFASSGKDGAIRIWDVILSQCVRVLTSHTR-SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA  387 (573)
Q Consensus       309 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~  387 (573)
                      +..+.+.+.+|.|+.+|+.+++.++.+ .... --..+...++......-.++.+.+||..+.+.+.++.-... -.   
T Consensus        65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-Gw---  139 (268)
T 3nok_A           65 GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-GW---  139 (268)
T ss_dssp             TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSC-CC---
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-ee---
Confidence            356788899999999999998877665 2221 12335555554444455688999999999888766542110 00   


Q ss_pred             eccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec--ccc---cc
Q psy2671         388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT--GHQ---QL  462 (573)
Q Consensus       388 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~--~h~---~~  462 (573)
                                                          ..++++..|+.+..++.|.++|+++.+. ..++.  .+.   ..
T Consensus       140 ------------------------------------GLt~Dg~~L~vSdGs~~l~~iDp~T~~v-~~~I~V~~~g~~v~~  182 (268)
T 3nok_A          140 ------------------------------------GLCYWNGKLVRSDGGTMLTFHEPDGFAL-VGAVQVKLRGQPVEL  182 (268)
T ss_dssp             ------------------------------------CEEEETTEEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCC
T ss_pred             ------------------------------------EEecCCCEEEEECCCCEEEEEcCCCCeE-EEEEEeCCCCccccc
Confidence                                                1123456676666788999999887643 22221  111   13


Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------cceEEEEEECCCCCEEEEEeC
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------VQAVYMVAWSSDSRLLVSGSA  522 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------~~~v~~v~~s~dg~~las~s~  522 (573)
                      ++.+.|. +|++.|....+..|.+.|.++++.+..+...             ..-.+.+|++|+++.|...++
T Consensus       183 lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          183 INELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             ccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            5667776 7777766667889999999999988766432             124688999998776655553

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.13  E-value=0.0004  Score=71.91  Aligned_cols=113  Identities=10%  Similarity=0.023  Sum_probs=63.6

Q ss_pred             CCeEEEEee-CCeEEEEEC-CCCceecccccCCccc----------EEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         261 SKQLVSGCK-NGVIHAWDS-STGKQIGQPMRGHKQW----------ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       261 g~~l~sgs~-dg~i~vwd~-~~~~~~~~~~~~h~~~----------v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      +..|+.++. ++.|.-+|. .+|+.+.+........          ...+.+.|.. ....+++..++.|+.+.-+|..+
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~-g~~~~rV~v~t~dg~l~AlDa~T  140 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD-GKTPALILKTQLDGNVAALNAET  140 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC-SSSCCEEEEECTTSEEEEEETTT
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC-CcceeEEEEEcCCCEEEEEECCC
Confidence            445666666 788888888 7887764422111100          0011111100 00112377788899999999999


Q ss_pred             CeEEEEecCCCc----cEEE-EEECCCcEEEEEe------CCCeEEEEeCCCCeeeEe
Q psy2671         329 SQCVRVLTSHTR----SVTC-IRWGGSGLIYSAS------QDRTIKVWRASDGVMCRT  375 (573)
Q Consensus       329 ~~~~~~~~~h~~----~v~~-~~~~~~~~l~s~s------~d~~i~vw~~~~~~~~~~  375 (573)
                      ++.+-.......    .+.+ ... .++.++.++      .++.|.-+|..+|+.+=.
T Consensus       141 G~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~  197 (599)
T 1w6s_A          141 GETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR  197 (599)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred             CCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence            987765432210    1111 111 135666665      389999999999876543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.05  E-value=0.0019  Score=61.58  Aligned_cols=237  Identities=14%  Similarity=0.136  Sum_probs=122.8

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEec-C------------------CCccEEEEEECC-CcEEEEEeCCCeEEEEeC
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLT-S------------------HTRSVTCIRWGG-SGLIYSASQDRTIKVWRA  367 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~------------------h~~~v~~~~~~~-~~~l~s~s~d~~i~vw~~  367 (573)
                      +++.+.++..++.|..|+...+....... .                  ....+..+++.+ ++.|+.+...+.|..++.
T Consensus        29 ~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~  108 (322)
T 2fp8_A           29 TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGS  108 (322)
T ss_dssp             TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECT
T ss_pred             CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeC
Confidence            45556677778889989876654322110 0                  012467888886 788888877777888887


Q ss_pred             CCCeeeEec---cCC-cceeeEEEecc-CceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEE
Q psy2671         368 SDGVMCRTL---EGH-AHWVNTLALST-DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF  442 (573)
Q Consensus       368 ~~~~~~~~~---~~~-~~~v~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~  442 (573)
                      .++......   .+. ....+.+++.+ +..+-+......   +....    ....             ++.+..++.+.
T Consensus       109 ~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~---~~~~~----~~~~-------------~~~~~~~g~v~  168 (322)
T 2fp8_A          109 EGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL---YDDRG----VQQI-------------MDTSDKTGRLI  168 (322)
T ss_dssp             TCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS---CCTTC----HHHH-------------HHHTCCCEEEE
T ss_pred             CCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccc---ccccc----ccee-------------hcccCCCceEE
Confidence            655321111   110 11223344443 322111111000   00000    0000             00001235677


Q ss_pred             EEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCC---e--EEEeecCCcceEEEEEECCCCCE
Q psy2671         443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIG---K--FITTLRGHVQAVYMVAWSSDSRL  516 (573)
Q Consensus       443 lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~---~--~~~~~~~h~~~v~~v~~s~dg~~  516 (573)
                      .||..+....  .+...-...+.++++|+|+.|..+ +.++.|..|+....   .  ....+.   . ...+++.++|++
T Consensus       169 ~~d~~~~~~~--~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---g-P~gi~~d~~G~l  242 (322)
T 2fp8_A          169 KYDPSTKETT--LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---N-PGNIKRNADGHF  242 (322)
T ss_dssp             EEETTTTEEE--EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---S-EEEEEECTTSCE
T ss_pred             EEeCCCCEEE--EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---C-CCCeEECCCCCE
Confidence            7776543211  111111234679999999866555 56688999987642   1  122222   2 567899999987


Q ss_pred             EEEEeC----------CCcEEEEeCCcccccccccCc----CCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         517 LVSGSA----------DSTLKVWNMKTKKIEQDLPGH----GDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       517 las~s~----------D~~v~vwd~~~~~~~~~l~~h----~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .++...          .+.|..+|.. ++.+..+...    -..+.++.+ .+++..++....+.|..++
T Consensus       243 ~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~  310 (322)
T 2fp8_A          243 WVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILV  310 (322)
T ss_dssp             EEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEE
T ss_pred             EEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEe
Confidence            666544          4668888874 5544433322    134566666 4555555555566666553

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.01  E-value=0.011  Score=56.18  Aligned_cols=140  Identities=15%  Similarity=0.181  Sum_probs=80.0

Q ss_pred             CCCcEEEEEeCCCeEEEEcCC-CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC----C
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPE-KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG----H  501 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~-~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~----h  501 (573)
                      +++.+++.+...+..+-+|.. ..-..+  .......+..+++++++++++. +.+|.+++.+...++....+..    +
T Consensus       172 ~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~  248 (327)
T 2xbg_A          172 PSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRN  248 (327)
T ss_dssp             TTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSC
T ss_pred             CCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccC
Confidence            445566555444444444421 111111  1233456889999999987654 4578887774332433332221    2


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc---CcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP---GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~---~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ...+.++++.+++.+++++. ++.| ++....++.=..+.   .+...++++.|.+++ .++.++.+|.|.-++
T Consensus       249 ~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          249 SVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV  319 (327)
T ss_dssp             CSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred             CcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence            23588999999888777654 6766 34444444322222   233567889888655 466777888876554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.00  E-value=0.0022  Score=57.32  Aligned_cols=181  Identities=12%  Similarity=0.110  Sum_probs=113.8

Q ss_pred             cEEEEEecccccCCCCCEEEEEeCCC--cEEEEECCCCeEEEEecCCCcc-EEEEEECCCcEEEEEeCCCeEEEEeCCCC
Q psy2671         294 WITALSWEPFHLNHQCRRFASSGKDG--AIRIWDVILSQCVRVLTSHTRS-VTCIRWGGSGLIYSASQDRTIKVWRASDG  370 (573)
Q Consensus       294 ~v~~~~~~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~l~s~s~d~~i~vw~~~~~  370 (573)
                      ...++.|.+      +..+.+.|.+|  .|+.+|+.+++.++.+...... -..+...++......-.++.+.++|..+.
T Consensus        22 ftqGL~~~~------~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl   95 (243)
T 3mbr_X           22 FTEGLFYLR------GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL   95 (243)
T ss_dssp             CEEEEEEET------TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred             ccccEEEEC------CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence            345565543      34567777754  8999999999888776533221 12344444333344456889999999998


Q ss_pred             eeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCc
Q psy2671         371 VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK  450 (573)
Q Consensus       371 ~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~  450 (573)
                      +.+.++.-... -..                                       .++++..|..+..++.|.++|+++.+
T Consensus        96 ~~~~ti~~~~~-Gwg---------------------------------------lt~dg~~L~vSdgs~~l~~iDp~t~~  135 (243)
T 3mbr_X           96 TPRARFRYPGE-GWA---------------------------------------LTSDDSHLYMSDGTAVIRKLDPDTLQ  135 (243)
T ss_dssp             EEEEEEECSSC-CCE---------------------------------------EEECSSCEEEECSSSEEEEECTTTCC
T ss_pred             cEEEEEeCCCC-ceE---------------------------------------EeeCCCEEEEECCCCeEEEEeCCCCe
Confidence            87766542110 001                                       11335555555668899999998754


Q ss_pred             cceeeec--ccc---ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC-------------cceEEEEEECC
Q psy2671         451 KSLARMT--GHQ---QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH-------------VQAVYMVAWSS  512 (573)
Q Consensus       451 ~~~~~~~--~h~---~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h-------------~~~v~~v~~s~  512 (573)
                      .. .++.  .+.   ..++.+.+. +|++.|..-.+..|.+.|.++++.+..+...             ..-.+.+|++|
T Consensus       136 ~~-~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~  213 (243)
T 3mbr_X          136 QV-GSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDA  213 (243)
T ss_dssp             EE-EEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEET
T ss_pred             EE-EEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcC
Confidence            32 2221  111   234566665 6777766656789999999999987765421             12468899999


Q ss_pred             CCCEEEEEeC
Q psy2671         513 DSRLLVSGSA  522 (573)
Q Consensus       513 dg~~las~s~  522 (573)
                      +++.|...++
T Consensus       214 ~~~~lfVTGK  223 (243)
T 3mbr_X          214 EHDRLFVTGK  223 (243)
T ss_dssp             TTTEEEEEET
T ss_pred             CCCEEEEECC
Confidence            8877666654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.95  E-value=0.00069  Score=72.84  Aligned_cols=156  Identities=12%  Similarity=0.106  Sum_probs=90.2

Q ss_pred             CCCC-cEEEEEEc-CCCCeEEEEeC-C----CeEEEEECCCC-eeeEE-ecCCCCcEEEEEEcCCCCeEEEEeeC-----
Q psy2671         205 GHAE-AVISVKFS-PNGRSLASGSG-D----TTVRFWDVTTQ-TPLFK-CEGHKHWVLCIAWSPDSKQLVSGCKN-----  270 (573)
Q Consensus       205 gh~~-~V~~~~fs-p~g~~las~s~-d----~~i~iwd~~~~-~~~~~-~~~h~~~V~~v~~s~dg~~l~sgs~d-----  270 (573)
                      +|.- .+...+|| |||++||-+.. +    .+|+++|+.++ +.+.. +.   .....++|+|||+.|+....+     
T Consensus       170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~  246 (751)
T 2xe4_A          170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE  246 (751)
T ss_dssp             TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred             CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence            4543 67889999 99998885532 2    35999999988 63211 11   112467899999988877765     


Q ss_pred             CeEEEEECCCCceecccc-c-CCcccEEEEEecccccCCCCCEEEEEeC---CCcEEEEECCCC--eE--EEEecCCCcc
Q psy2671         271 GVIHAWDSSTGKQIGQPM-R-GHKQWITALSWEPFHLNHQCRRFASSGK---DGAIRIWDVILS--QC--VRVLTSHTRS  341 (573)
Q Consensus       271 g~i~vwd~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~--~~--~~~~~~h~~~  341 (573)
                      ..|.++++.++......+ . ........+.|+|     ++++|+..+.   ...|.++|+..+  ..  ..........
T Consensus       247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-----Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~  321 (751)
T 2xe4_A          247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-----DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV  321 (751)
T ss_dssp             EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-----TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred             CEEEEEECCCCchhcEEEEecCCCceEEEEEECC-----CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc
Confidence            368888887654211111 1 2223445566654     6777765542   345778888764  23  2233334445


Q ss_pred             EEEEEECCCcEE-EEEeCC--C--eEEEEeCC
Q psy2671         342 VTCIRWGGSGLI-YSASQD--R--TIKVWRAS  368 (573)
Q Consensus       342 v~~~~~~~~~~l-~s~s~d--~--~i~vw~~~  368 (573)
                      ...+.|...+.+ +....+  +  .|..+++.
T Consensus       322 ~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~  353 (751)
T 2xe4_A          322 RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG  353 (751)
T ss_dssp             CEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred             eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence            556665444444 444333  2  34444544

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.87  E-value=0.0053  Score=55.65  Aligned_cols=202  Identities=10%  Similarity=0.094  Sum_probs=124.6

Q ss_pred             cCCCccccEEEEEEcCCCCeeEE-eeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLAS-GSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat-~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      .++|-.+.++++++.|++..|.+ ...++.|..-|.. ++.+...                                   
T Consensus        21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i-----------------------------------   64 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI-----------------------------------   64 (255)
T ss_dssp             ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-----------------------------------
T ss_pred             ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-----------------------------------
Confidence            45677678999999998765554 5667777777765 4322110                                   


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEe------cCCCCcEEE
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKC------EGHKHWVLC  254 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~------~~h~~~V~~  254 (573)
                                        .+.|. ...-.+++.+++.++++.-.++.+.++++.....   +...      ...+.....
T Consensus        65 ------------------~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EG  125 (255)
T 3qqz_A           65 ------------------PLDFV-KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEG  125 (255)
T ss_dssp             ------------------ECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEE
T ss_pred             ------------------ecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcce
Confidence                              01121 2345677788887767666778888888765432   1111      123456789


Q ss_pred             EEEcCCCCeEEEEeeCCeEEEEECCC---Cceeccc------ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEE
Q psy2671         255 IAWSPDSKQLVSGCKNGVIHAWDSST---GKQIGQP------MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWD  325 (573)
Q Consensus       255 v~~s~dg~~l~sgs~dg~i~vwd~~~---~~~~~~~------~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd  325 (573)
                      |+|+|+++.|+++.......+|....   +..+...      -..+...+.+++++|.    .++.++.+.....+..+|
T Consensus       126 LA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~----tg~lliLS~~s~~L~~~d  201 (255)
T 3qqz_A          126 LAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ----KNTLLVLSHESRALQEVT  201 (255)
T ss_dssp             EEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT----TTEEEEEETTTTEEEEEC
T ss_pred             EEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC----CCeEEEEECCCCeEEEEc
Confidence            99999998888877765555555431   1111000      0112234677888773    456777777888888888


Q ss_pred             CCCCeEEEEecCC---------CccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         326 VILSQCVRVLTSH---------TRSVTCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       326 ~~~~~~~~~~~~h---------~~~v~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                      ... +.+..+.-.         -..-..+++.++|.+|..+..+.+..+.
T Consensus       202 ~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~  250 (255)
T 3qqz_A          202 LVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT  250 (255)
T ss_dssp             TTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred             CCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence            654 444443221         1245789999999888888877665554

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.78  E-value=0.052  Score=56.57  Aligned_cols=332  Identities=11%  Similarity=0.068  Sum_probs=169.8

Q ss_pred             EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceecc
Q psy2671         210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~~  286 (573)
                      ...+++.+.+..| .+-...+.|.+.++............-..-..|++.|....|+...+  .+.|...++...... .
T Consensus        82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~  160 (628)
T 4a0p_A           82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-T  160 (628)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred             cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-E
Confidence            4567888765555 44456688999998654332222233344689999986666766553  467777777644321 1


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                       +...-.+..++++.+.    .++.+.+-...+.|...|+..... ..+.........+++..+..+++-...+.|...|
T Consensus       161 -l~~~~~~P~GlalD~~----~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~d  234 (628)
T 4a0p_A          161 -LVPNVGRANGLTIDYA----KRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERAN  234 (628)
T ss_dssp             -EECSCSSEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred             -EECCCCCcceEEEccc----cCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEE
Confidence             1112334566666542    234455556677888888765433 3333333445677776654455555578888888


Q ss_pred             CCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch--hhhhh---hh-hheeeeCCCC-----------
Q psy2671         367 ASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE--ESSKH---AL-AKYQAQCPEG-----------  429 (573)
Q Consensus       367 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~-~~~~~~~~~~-----------  429 (573)
                      ..+|.....+.........+.+......       .  ..++....  .....   .. ..+...||.|           
T Consensus       235 k~tg~~~~~l~~~~~~p~~i~v~~~~~q-------~--~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~  305 (628)
T 4a0p_A          235 KTSGQNRTIIQGHLDYVMDILVFHSSRQ-------S--GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCS  305 (628)
T ss_dssp             TTTCCSCEEEECSCCSCCEEEEECGGGS-------C--CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEE
T ss_pred             CCCCCceEEEecCCCCcceeeeeeeccc-------c--cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCc
Confidence            7777544444333222222222111000       0  00000000  00000   00 1122223332           


Q ss_pred             ---cEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeecC----
Q psy2671         430 ---EKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLRG----  500 (573)
Q Consensus       430 ---~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~~----  500 (573)
                         .+|+.+ ....|+-..+......-..+. ..-..+..|+|++.+..|..+ ...+.|+.++.........+..    
T Consensus       306 ~~~~~Ll~s-~~~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~  384 (628)
T 4a0p_A          306 APTTFLLFS-QKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPS  384 (628)
T ss_dssp             CCSSEEEEE-ETTEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----
T ss_pred             cccceeeee-ccceEEEEecccccCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccccc
Confidence               233332 234555555433211111111 112447889999866655554 4567788887654332222322    


Q ss_pred             --CcceEEEEEECCCCCEEE-EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE
Q psy2671         501 --HVQAVYMVAWSSDSRLLV-SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK  558 (573)
Q Consensus       501 --h~~~v~~v~~s~dg~~la-s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~  558 (573)
                        .......+++...++.|. +-+..+.|.+.++........+....+...++++.|...+
T Consensus       385 ~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~  445 (628)
T 4a0p_A          385 QNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGY  445 (628)
T ss_dssp             ---CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTE
T ss_pred             ccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCe
Confidence              223577889988766554 5566788999988643221112223345778888884333

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.76  E-value=0.03  Score=53.25  Aligned_cols=148  Identities=11%  Similarity=0.055  Sum_probs=75.7

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe---cCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI  284 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~---~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~  284 (573)
                      ..+.++.|+| +..++ ++.++.|.. ....++.-...   ..+...+..+.+.+++..++.+ .+|.|.. ....|+.-
T Consensus        80 ~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW  154 (327)
T 2xbg_A           80 YRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNW  154 (327)
T ss_dssp             CEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSE
T ss_pred             ccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCC
Confidence            4577888886 44444 455564443 22223221111   1233457788887777655554 4554322 12234322


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE-EEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR-IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK  363 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~-iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~  363 (573)
                      .....+....+..+.+.+     +++.++.+ .+|.+. -+|-.-..-...-......+..+.+.+++.++.++.+|.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~-----~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~  228 (327)
T 2xbg_A          155 QALVQEAIGVMRNLNRSP-----SGEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIA  228 (327)
T ss_dssp             EEEECSCCCCEEEEEECT-----TSCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEE
T ss_pred             EEeecCCCcceEEEEEcC-----CCcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEE
Confidence            222233445677777654     34555544 444443 34421111111122345567888888888888888888877


Q ss_pred             EEe
Q psy2671         364 VWR  366 (573)
Q Consensus       364 vw~  366 (573)
                      +.+
T Consensus       229 ~s~  231 (327)
T 2xbg_A          229 FSD  231 (327)
T ss_dssp             EEE
T ss_pred             Eec
Confidence            653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.75  E-value=0.022  Score=55.56  Aligned_cols=241  Identities=13%  Similarity=0.003  Sum_probs=124.1

Q ss_pred             EEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy2671         254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR  333 (573)
Q Consensus       254 ~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  333 (573)
                      |.+..++ .+|+.+. ...|+..++..+... .... ......++.|.+.    .+..+.+-...+.|+.+++.......
T Consensus        81 C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~-~~~~-~~~~~~gl~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~  152 (386)
T 3v65_B           81 CKALGPE-PVLLFAN-RIDIRQVLPHRSEYT-LLLN-NLENAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEE  152 (386)
T ss_dssp             EEECSSC-CEEEEEC-BSCEEEECTTSCCCE-EEEC-SCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCCEEE
T ss_pred             ECCcccc-ceeEeec-CccceeeccCCCcEE-EEec-CCCccEEEEEecC----CCeEEEEeCCCCcEEEEecCCCCcEE
Confidence            4444443 3444333 345777777654321 1111 2234677777652    33455666667888888887655433


Q ss_pred             EecCCCccEEEEEECC-Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         334 VLTSHTRSVTCIRWGG-SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       334 ~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      .+.........+++.. .+ ++++-...+.|.+.++........+.......+.+++.                      
T Consensus       153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavd----------------------  210 (386)
T 3v65_B          153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALH----------------------  210 (386)
T ss_dssp             EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEE----------------------
T ss_pred             EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEE----------------------
Confidence            3332223344555553 33 44455556777777765332211111111112222222                      


Q ss_pred             hhhhhhhhhheeeeCCC-CcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEe
Q psy2671         412 EESSKHALAKYQAQCPE-GEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWD  488 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~-~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd  488 (573)
                                     |. +.+.++-... +.|..+++...... ......-...+.|+|+|++..|..+ +..+.|..+|
T Consensus       211 ---------------p~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d  274 (386)
T 3v65_B          211 ---------------PMEGTIYWTDWGNTPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN  274 (386)
T ss_dssp             ---------------TTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred             ---------------cCCCeEEEeccCCCCEEEEEeCCCCCcE-EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence                           22 2333343333 56777666533211 1111222346889999866655544 4567899998


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP  541 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~  541 (573)
                      .........+.........+++ ..+.++++....+.|..++..+++....+.
T Consensus       275 ~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          275 LDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             TTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence            7643322233322334566777 345566666677889888866666544443

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.71  E-value=0.023  Score=55.43  Aligned_cols=161  Identities=13%  Similarity=-0.006  Sum_probs=97.6

Q ss_pred             EEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-C-CeEEEEECCCCceeccc
Q psy2671         211 ISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-N-GVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       211 ~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-d-g~i~vwd~~~~~~~~~~  287 (573)
                      ..+++.+.+..| ++-...+.|.+.++...............-..+++.|++..|+.+.. . +.|...++...... ..
T Consensus       162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~  240 (386)
T 3v65_B          162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II  240 (386)
T ss_dssp             CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE
T ss_pred             cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EE
Confidence            457788755544 55556778888887654433333333345689999997777665544 3 67888887643221 11


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeC
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRA  367 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~  367 (573)
                      ....-.+..++++.|.    .++.+++-+..+.|..+++........+.........+++..+..+++-...+.|..++.
T Consensus       241 ~~~~~~~PnGlavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~  316 (386)
T 3v65_B          241 ADTHLFWPNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK  316 (386)
T ss_dssp             ECSSCSCEEEEEEEGG----GTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred             EECCCCCeeeEEEeCC----CCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence            1222335677887653    334556666678888888764433333333344566777755555666667788888886


Q ss_pred             CCCeeeEec
Q psy2671         368 SDGVMCRTL  376 (573)
Q Consensus       368 ~~~~~~~~~  376 (573)
                      .+|.....+
T Consensus       317 ~~G~~~~~i  325 (386)
T 3v65_B          317 FTGKNQEII  325 (386)
T ss_dssp             TTCCSCEEE
T ss_pred             CCCcceEEE
Confidence            666554444

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.69  E-value=0.041  Score=52.79  Aligned_cols=226  Identities=12%  Similarity=-0.036  Sum_probs=115.6

Q ss_pred             CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-
Q psy2671         271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-  349 (573)
Q Consensus       271 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-  349 (573)
                      ..|+..++...... ....+ .....++.|.+.    .+..+.+-...+.|+.+++........+.........+++.. 
T Consensus        53 ~~I~~i~~~g~~~~-~~~~~-~~~~~~l~~d~~----~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~  126 (349)
T 3v64_C           53 IDIRQVLPHRSEYT-LLLNN-LENAIALDFHHR----RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV  126 (349)
T ss_dssp             SCEEEECTTSCCEE-EEECS-CSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred             cceEEEeCCCCeeE-EeecC-CCceEEEEEecc----ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC
Confidence            34666666543321 11112 233567777652    334555555677888888776543333332223345566653 


Q ss_pred             Cc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         350 SG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       350 ~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      .+ ++++-...+.|.+.++................+.+++.+.                                    .
T Consensus       127 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~------------------------------------~  170 (349)
T 3v64_C          127 HDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM------------------------------------E  170 (349)
T ss_dssp             TTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT------------------------------------T
T ss_pred             CCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC------------------------------------c
Confidence            33 4455556678888876533221111111111223333211                                    2


Q ss_pred             CcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         429 GEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       429 ~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                      +.+..+-... +.|...++...... ......-...+.++++|++..|..+ +..+.|..+|.........+........
T Consensus       171 g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~  249 (349)
T 3v64_C          171 GTIYWTDWGNTPRIEASSMDGSGRR-IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPF  249 (349)
T ss_dssp             TEEEEEECSSSCEEEEEETTSCSCE-ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE
T ss_pred             CeEEEeccCCCCEEEEEeCCCCCcE-EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCce
Confidence            3334444444 66777766532211 1111122346889999876665554 4567899998764332222332233456


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCcccccccc
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL  540 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l  540 (573)
                      .+++ ..+.+.++-...+.|..++..+++....+
T Consensus       250 giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i  282 (349)
T 3v64_C          250 AITV-FEDSLYWTDWHTKSINSANKFTGKNQEII  282 (349)
T ss_dssp             EEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred             EEEE-ECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence            6777 34555556666778888886566544433

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.64  E-value=0.14  Score=57.42  Aligned_cols=331  Identities=12%  Similarity=0.087  Sum_probs=161.4

Q ss_pred             eEEEEECCCCeeeEEecCC-CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc-CC
Q psy2671         230 TVRFWDVTTQTPLFKCEGH-KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL-NH  307 (573)
Q Consensus       230 ~i~iwd~~~~~~~~~~~~h-~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~  307 (573)
                      .|++.+......+..+... ...|.+.+.+  +.+++.++ ++.+.++++..+.........-...|.++.+.|..- ..
T Consensus       493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~  569 (1158)
T 3ei3_A          493 SVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG  569 (1158)
T ss_dssp             CEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred             EEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence            4556665444444444432 2345555554  34666664 678888877655321111111234688988776421 12


Q ss_pred             CCCEEEEEeC-CCcEEEEECCCCeEEEEecC-CCccEEEE---EECCCcEEEEEeCCCeEEEEeC--CCCeeeEe---cc
Q psy2671         308 QCRRFASSGK-DGAIRIWDVILSQCVRVLTS-HTRSVTCI---RWGGSGLIYSASQDRTIKVWRA--SDGVMCRT---LE  377 (573)
Q Consensus       308 ~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~-h~~~v~~~---~~~~~~~l~s~s~d~~i~vw~~--~~~~~~~~---~~  377 (573)
                      .++.++.|.+ |++++|+++...+.+....- ......++   .+.+.-.++.|-.||.+..+.+  .+|.+...   .-
T Consensus       570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~L  649 (1158)
T 3ei3_A          570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTL  649 (1158)
T ss_dssp             CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEEC
T ss_pred             cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEc
Confidence            3568888887 99999999987655543221 11122333   3333346888889998865544  34443321   11


Q ss_pred             CCcceeeEEEeccCceeEEE-EcC--------CCceeeCCCCchhhhhhhhhheee-eCCCCcEEEEEeCCCeEEEEcCC
Q psy2671         378 GHAHWVNTLALSTDYLMRVE-ATS--------TGGFKYDPANPEESSKHALAKYQA-QCPEGEKLVSGSDDFTLFLWNPE  447 (573)
Q Consensus       378 ~~~~~v~~~~~s~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~sg~~dg~i~lwd~~  447 (573)
                      |. .++.-..+.......+. ..+        .+.+.+.+.....  ......+.. .+|+  -++. ..++.+++..+.
T Consensus       650 G~-~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~--v~~~~~F~se~~~~--g~v~-~~~~~LrI~~i~  723 (1158)
T 3ei3_A          650 GT-QPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKE--VNYMCPLNSDGYPD--SLAL-ANNSTLTIGTID  723 (1158)
T ss_dssp             CS-SCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSC--CCEEEEECCSSSTT--EEEE-ECSSCEEEEEEC
T ss_pred             CC-CceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHH--hceEeccCcccCCC--cEEE-EcCCceEEEEec
Confidence            21 12211111111111111 111        1222222111100  000000110 1233  3333 334568887654


Q ss_pred             CCccceeeeccccccEEEEEECCCCCEEEEeeCC----------------------------------------------
Q psy2671         448 KEKKSLARMTGHQQLINCVEFSPDGRIIASASFD----------------------------------------------  481 (573)
Q Consensus       448 ~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d----------------------------------------------  481 (573)
                      +......+...-...+..++++|+.+.++.+..+                                              
T Consensus       724 ~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  803 (1158)
T 3ei3_A          724 EIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEE  803 (1158)
T ss_dssp             CSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCE
T ss_pred             ccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCc
Confidence            3322111111123457788888877765543311                                              


Q ss_pred             ---CcEEEEeCCCCeEEEeecC-CcceEEEEE---ECCC-CCEEEEEe----------CCCcEEEEeCCccccccc-ccC
Q psy2671         482 ---KSIKLWDGRIGKFITTLRG-HVQAVYMVA---WSSD-SRLLVSGS----------ADSTLKVWNMKTKKIEQD-LPG  542 (573)
Q Consensus       482 ---g~i~lwd~~~~~~~~~~~~-h~~~v~~v~---~s~d-g~~las~s----------~D~~v~vwd~~~~~~~~~-l~~  542 (573)
                         +.|++.|..+.+.+..+.- ....+.+++   |..+ ..+|+.|.          ..|.|++|++..+++... -..
T Consensus       804 ~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~  883 (1158)
T 3ei3_A          804 VEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE  883 (1158)
T ss_dssp             EEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE
T ss_pred             eeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE
Confidence               2367788777776654432 123344443   4333 46888776          347799999875443211 112


Q ss_pred             cCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         543 HGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       543 h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..+.|+++.=- +|+.|++.  .++|++|+
T Consensus       884 v~g~v~al~~~-~g~Lla~i--g~~l~vy~  910 (1158)
T 3ei3_A          884 VKGAVYSMVEF-NGKLLASI--NSTVRLYE  910 (1158)
T ss_dssp             ESSCEEEEEEE-TTEEEEEE--TTEEEEEE
T ss_pred             cCCcCEEEeee-CCEEEEEc--CCEEEEEE
Confidence            35678888633 45444433  46788775

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.58  E-value=0.06  Score=51.65  Aligned_cols=162  Identities=13%  Similarity=-0.010  Sum_probs=96.9

Q ss_pred             EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-C-CeEEEEECCCCceecc
Q psy2671         210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-N-GVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-d-g~i~vwd~~~~~~~~~  286 (573)
                      ...+++.+.+..| ++-...+.|.+.++...............-..+++.|.+..|+.... . +.|...++...... .
T Consensus       118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~  196 (349)
T 3v64_C          118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-I  196 (349)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred             ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-E
Confidence            3577888755544 55556788999998765433333333345689999997666665443 4 77888887643321 1


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                      .....-.+..++++.|.    .++.+.+-+..+.|..+++........+.........+++..+..+++-...+.|..++
T Consensus       197 ~~~~~~~~PnGla~d~~----~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~  272 (349)
T 3v64_C          197 IADTHLFWPNGLTIDYA----GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSAN  272 (349)
T ss_dssp             SCCSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred             EEECCCCCcceEEEeCC----CCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEE
Confidence            12222345677887652    34455666667788888876543333333334455667774444555555677888887


Q ss_pred             CCCCeeeEec
Q psy2671         367 ASDGVMCRTL  376 (573)
Q Consensus       367 ~~~~~~~~~~  376 (573)
                      ..+|.....+
T Consensus       273 ~~~G~~~~~i  282 (349)
T 3v64_C          273 KFTGKNQEII  282 (349)
T ss_dssp             TTTCCSCEEE
T ss_pred             ccCCCccEEe
Confidence            6666544443

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.44  E-value=0.082  Score=49.90  Aligned_cols=229  Identities=11%  Similarity=0.057  Sum_probs=121.3

Q ss_pred             CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECCCC---ceecccccCCcccEEEEEeccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPF  303 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~  303 (573)
                      ...|+..|+.+........ .......++|++++..|+.+ ...+.|..+++...   ..........-....++++.+.
T Consensus         9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~   87 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI   87 (316)
T ss_dssp             BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence            3468888887765433333 23457899999876666554 45689999998751   1111111111122344554321


Q ss_pred             ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeCC--CeEEEEeCCCCeeeEec-cCC
Q psy2671         304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQD--RTIKVWRASDGVMCRTL-EGH  379 (573)
Q Consensus       304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~d--~~i~vw~~~~~~~~~~~-~~~  379 (573)
                          .++.+++-...+.|.+.++........+.........+++.+ .+.++.+...  +.|...++. |.....+ ...
T Consensus        88 ----~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~  162 (316)
T 1ijq_A           88 ----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTEN  162 (316)
T ss_dssp             ----TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSS
T ss_pred             ----CCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECC
Confidence                234556666778888888765443333333334567888875 5566655543  567666654 2222211 111


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc-ceeeecc
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK-SLARMTG  458 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~  458 (573)
                      ..+-+.++++++                                    .+.+.++-+..+.|..+|+..... .+....+
T Consensus       163 ~~~P~gla~d~~------------------------------------~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~  206 (316)
T 1ijq_A          163 IQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  206 (316)
T ss_dssp             CSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred             CCCceEEEEecc------------------------------------CCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence            222333443321                                    123344444556788887754221 1111111


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      .-.....+++. .+.++++-...+.|..+|..+++.+..+.
T Consensus       207 ~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          207 RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred             ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence            11234567775 45666666677889999987776555543

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.37  E-value=0.099  Score=49.32  Aligned_cols=230  Identities=10%  Similarity=0.029  Sum_probs=118.4

Q ss_pred             CCeEEEEECCCCe-eeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCCcccEEEEEeccccc
Q psy2671         228 DTTVRFWDVTTQT-PLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       228 d~~i~iwd~~~~~-~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~  305 (573)
                      ...|+..++.... .............+++|.+.+..|+ +-...+.|..+++..+..........-....++++.+   
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~---   88 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW---   88 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET---
T ss_pred             cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc---
Confidence            4678888887653 1111111112467899998655555 4455688999998765321111111111233444432   


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeC--CCeEEEEeCCCCeeeEeccCCcce
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQ--DRTIKVWRASDGVMCRTLEGHAHW  382 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~--d~~i~vw~~~~~~~~~~~~~~~~~  382 (573)
                       ..++.+.+-...+.|.++++........+.........+++.+ .+.++.+..  .+.|...++..............+
T Consensus        89 -~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~  167 (318)
T 3sov_A           89 -LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW  167 (318)
T ss_dssp             -TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC
T ss_pred             -CCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC
Confidence             1334556656677888888765433333333344567788875 356665553  466666665422111111111122


Q ss_pred             eeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecccccc
Q psy2671         383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL  462 (573)
Q Consensus       383 v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~  462 (573)
                      -+.++++++                                    .+.+.++-+..+.|..+++....... ...+....
T Consensus       168 Pnglavd~~------------------------------------~~~lY~aD~~~~~I~~~d~dG~~~~~-~~~~~~~~  210 (318)
T 3sov_A          168 PNGLTLDYE------------------------------------EQKLYWADAKLNFIHKSNLDGTNRQA-VVKGSLPH  210 (318)
T ss_dssp             EEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCEE-EECSCCSC
T ss_pred             ccEEEEecc------------------------------------CCEEEEEECCCCEEEEEcCCCCceEE-EecCCCCC
Confidence            233443321                                    23334444556677777765322111 11112233


Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      ...+++.. +.++.+-...+.|..+|..+|+....+.
T Consensus       211 P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          211 PFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             EEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             ceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence            45677753 4555666677889999987776555443

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.35  E-value=0.13  Score=50.27  Aligned_cols=165  Identities=12%  Similarity=-0.038  Sum_probs=101.3

Q ss_pred             CcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCcee
Q psy2671         208 EAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQI  284 (573)
Q Consensus       208 ~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~  284 (573)
                      .....+++.+.+..| ++-...+.|.+.++..................|++.|.+.+|+...+  .+.|...++......
T Consensus       159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~  238 (400)
T 3p5b_L          159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  238 (400)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred             CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence            346788888854444 55556789999998765443333333345689999997777766553  367888887643321


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeE
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTI  362 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i  362 (573)
                       ......-.+..++++.+.    .++.+.+-+..+.|..+|+...........  .......++...+..+++-...+.|
T Consensus       239 -~~~~~~l~~P~glavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V  313 (400)
T 3p5b_L          239 -SLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAI  313 (400)
T ss_dssp             -EEECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSE
T ss_pred             -EEEECCCCceEEEEEEeC----CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeE
Confidence             111222245677777652    234455556677888888865433333322  2344566777556666777777888


Q ss_pred             EEEeCCCCeeeEecc
Q psy2671         363 KVWRASDGVMCRTLE  377 (573)
Q Consensus       363 ~vw~~~~~~~~~~~~  377 (573)
                      ..++..+|.....+.
T Consensus       314 ~~~~~~~G~~~~~i~  328 (400)
T 3p5b_L          314 FSANRLTGSDVNLLA  328 (400)
T ss_dssp             EEEESSSCCCCEEEE
T ss_pred             EEEEcCCCCceEEEe
Confidence            888877776554443

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.35  E-value=0.067  Score=52.97  Aligned_cols=152  Identities=13%  Similarity=0.095  Sum_probs=84.5

Q ss_pred             cEEEEEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-C----eEEEEECCCCc
Q psy2671         209 AVISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-G----VIHAWDSSTGK  282 (573)
Q Consensus       209 ~V~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g----~i~vwd~~~~~  282 (573)
                      ....++++| ++..|..+...+.|+.+|+.++...... ........|+|+++|++|+.+... +    .+.+.+. .+.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence            456789998 4556666655588999999876543332 334457899999999977666542 1    2333333 222


Q ss_pred             eec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec-CCCccEEEEEECCCcE-EEEE-eC
Q psy2671         283 QIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTCIRWGGSGL-IYSA-SQ  358 (573)
Q Consensus       283 ~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~-s~  358 (573)
                      ... ..+. .......+++.|    .++..+++-..++.|..++...+....... ........+++++++. ++.+ ..
T Consensus       216 ~~~~~~l~-~~~~p~giavdp----~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~  290 (430)
T 3tc9_A          216 FKVITELT-KGQNCNGAETHP----INGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN  290 (430)
T ss_dssp             SCSEEEEE-ECSSCCCEEECT----TTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred             eeeeeeec-cCCCceEEEEeC----CCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence            110 0000 001122233332    145566666667888888887654422221 1123456788887763 5544 34


Q ss_pred             CCeEEEEeC
Q psy2671         359 DRTIKVWRA  367 (573)
Q Consensus       359 d~~i~vw~~  367 (573)
                      .+.|..++.
T Consensus       291 ~~~I~~~~~  299 (430)
T 3tc9_A          291 QHYILRSDY  299 (430)
T ss_dssp             TTEEEEEEE
T ss_pred             CCEEEEEeC
Confidence            566666653

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.35  E-value=0.086  Score=49.75  Aligned_cols=162  Identities=10%  Similarity=-0.021  Sum_probs=98.4

Q ss_pred             EEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceecc
Q psy2671         210 VISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIGQ  286 (573)
Q Consensus       210 V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~~  286 (573)
                      ...+++.+.+..| ++-...+.|.++++...............-..+++.|.+..|+.+..  .+.|...++...... .
T Consensus        81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~  159 (318)
T 3sov_A           81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-I  159 (318)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE-E
T ss_pred             ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE-E
Confidence            3467888754444 55556789999998754332222233345689999987767766653  578888887643211 1


Q ss_pred             cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEe
Q psy2671         287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR  366 (573)
Q Consensus       287 ~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~  366 (573)
                      .....-....++++.|.    .++.+.+-+..+.|..+|+..................+++..++.+++-...+.|..++
T Consensus       160 ~~~~~l~~Pnglavd~~----~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~  235 (318)
T 3sov_A          160 IINSEIYWPNGLTLDYE----EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACN  235 (318)
T ss_dssp             EECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred             EEECCCCCccEEEEecc----CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEE
Confidence            11122234567777652    33455666667888888886433322333334455677776666677766778898888


Q ss_pred             CCCCeeeEec
Q psy2671         367 ASDGVMCRTL  376 (573)
Q Consensus       367 ~~~~~~~~~~  376 (573)
                      ..+|.....+
T Consensus       236 ~~~G~~~~~i  245 (318)
T 3sov_A          236 KYTGEGLREI  245 (318)
T ss_dssp             TTTCCSCEEE
T ss_pred             CCCCCceEEE
Confidence            8777654433

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.24  E-value=0.11  Score=46.95  Aligned_cols=117  Identities=14%  Similarity=0.195  Sum_probs=71.0

Q ss_pred             ecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCCCceeccc-ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         245 CEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSSTGKQIGQP-MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       245 ~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      +.+-...+..++|+|++..|++ ...++.|...|.. ++.+... +.+. .-..++++.+     ++.++++.-.++.+.
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~-----~g~~~vs~E~~~~l~   94 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIG-----DNQFVISDERDYAIY   94 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECS-----TTEEEEEETTTTEEE
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeC-----CCEEEEEECCCCcEE
Confidence            4455567999999998776665 6667889999987 6654332 2222 2345555432     444555555667788


Q ss_pred             EEECCCCeE---EEEec------CCCccEEEEEECCCc-EEEEEeCCCeEEEEeCC
Q psy2671         323 IWDVILSQC---VRVLT------SHTRSVTCIRWGGSG-LIYSASQDRTIKVWRAS  368 (573)
Q Consensus       323 iwd~~~~~~---~~~~~------~h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~  368 (573)
                      ++++.....   +....      ..+.....++|.+.+ .++++.......+|...
T Consensus        95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~  150 (255)
T 3qqz_A           95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN  150 (255)
T ss_dssp             EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred             EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence            887654331   12211      234557899998765 67777665555565543

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.18  E-value=0.084  Score=52.30  Aligned_cols=144  Identities=10%  Similarity=0.090  Sum_probs=82.2

Q ss_pred             CC-CCcEEEEEeCCCeEEEEcCCCCccceee-eccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCC--CCeE--EEee
Q psy2671         426 CP-EGEKLVSGSDDFTLFLWNPEKEKKSLAR-MTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGR--IGKF--ITTL  498 (573)
Q Consensus       426 ~~-~~~~l~sg~~dg~i~lwd~~~~~~~~~~-~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~--~~~~--~~~~  498 (573)
                      .| ++.+.++-..++.|+.+++.++...... ..+....-..++|+|+|+.| ++-...+.|+.++..  ++..  ...+
T Consensus       236 d~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~  315 (433)
T 4hw6_A          236 HPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIV  315 (433)
T ss_dssp             CTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEE
T ss_pred             eCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEE
Confidence            35 5666666667788999988744321111 11112223469999999944 444567889987744  3321  1111


Q ss_pred             cC------C---------cceEEEEEE---------CCCCCEEEEEeCCCcEEEEeCCcccccccccC------------
Q psy2671         499 RG------H---------VQAVYMVAW---------SSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG------------  542 (573)
Q Consensus       499 ~~------h---------~~~v~~v~~---------s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~------------  542 (573)
                      .+      .         ...-..+++         .++|.+.++-...+.|+.++. .+... .+.+            
T Consensus       316 ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG  393 (433)
T 4hw6_A          316 CGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDG  393 (433)
T ss_dssp             EECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCE
T ss_pred             EecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCC
Confidence            11      1         123467888         777777777677788999985 33221 1111            


Q ss_pred             ------cCCCEEEEEEc-cCCCEEEEeeCCCcEEEc
Q psy2671         543 ------HGDEVYAVDWA-PDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       543 ------h~~~v~~~~~s-~d~~~l~s~~~d~~i~iw  571 (573)
                            .-..-..|++. +++..+++=...+.|+..
T Consensus       394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i  429 (433)
T 4hw6_A          394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI  429 (433)
T ss_dssp             ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred             ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence                  01236789999 566555554555667654

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.17  E-value=0.13  Score=50.90  Aligned_cols=234  Identities=10%  Similarity=0.084  Sum_probs=120.5

Q ss_pred             EEEEEEcCC--CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC---Cc-EEEEE
Q psy2671         252 VLCIAWSPD--SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD---GA-IRIWD  325 (573)
Q Consensus       252 V~~v~~s~d--g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d---g~-v~iwd  325 (573)
                      -..|+|+|+  +..|+.+...+.|+.+|+.++....  +........++++.+     +++.+++....   .. +...+
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~--~~~~~~~P~giavd~-----dG~lyVad~~~~~~~~gv~~~~  213 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI--KTTNIGQCADVNFTL-----NGDMVVVDDQSSDTNTGIYLFT  213 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE--ECCCCSCEEEEEECT-----TCCEEEEECCSCTTSEEEEEEC
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE--eecCCCCccEEEECC-----CCCEEEEcCCCCcccceEEEEE
Confidence            467899984  4456666555889999987765432  122233456676654     45544443211   11 21122


Q ss_pred             CCCCeE-EEEecCCCccEEEEEECC-CcEEEEEe-CCCeEEEEeCCCCeeeEecc--CCcceeeEEEeccCceeEEEEcC
Q psy2671         326 VILSQC-VRVLTSHTRSVTCIRWGG-SGLIYSAS-QDRTIKVWRASDGVMCRTLE--GHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       326 ~~~~~~-~~~~~~h~~~v~~~~~~~-~~~l~s~s-~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      ...... ...+. .......+++.+ ++.|+.+. .++.|..++..++.....+.  +...+-..+              
T Consensus       214 ~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i--------------  278 (433)
T 4hw6_A          214 RASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHI--------------  278 (433)
T ss_dssp             GGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEE--------------
T ss_pred             CCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccE--------------
Confidence            111100 01111 112234466666 66666555 46678888877664421110  000011112              


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCCCccce---eeecc---------------ccc
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEKEKKSL---ARMTG---------------HQQ  461 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~~~~~~---~~~~~---------------h~~  461 (573)
                                             +..|++. +.++-...+.|+.+++......+   ..+.+               .-.
T Consensus       279 -----------------------a~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~  335 (433)
T 4hw6_A          279 -----------------------VWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLW  335 (433)
T ss_dssp             -----------------------EECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCS
T ss_pred             -----------------------EEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEc
Confidence                                   2345566 34444455677776543211000   01111               012


Q ss_pred             cEEEEEE---------CCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC------------------cceEEEEEEC-CC
Q psy2671         462 LINCVEF---------SPDGRIIASASFDKSIKLWDGRIGKFITTLRGH------------------VQAVYMVAWS-SD  513 (573)
Q Consensus       462 ~v~~v~~---------sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h------------------~~~v~~v~~s-~d  513 (573)
                      ....+++         .++|.++++-...+.|+.++. .|.. .++.+.                  ...-..|+++ ++
T Consensus       336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~  413 (433)
T 4hw6_A          336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKR  413 (433)
T ss_dssp             SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTT
T ss_pred             CCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCC
Confidence            2567899         788888877777889999985 5543 332211                  1235678888 56


Q ss_pred             CCEEEEEeCCCcEEEEeCC
Q psy2671         514 SRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~  532 (573)
                      |.++++-...+.|+.++++
T Consensus       414 g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          414 KCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             TEEEEEEGGGTEEEEEEEC
T ss_pred             CEEEEEeCCCCEEEEEecC
Confidence            6666655566778777653

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.14  E-value=0.32  Score=51.96  Aligned_cols=163  Identities=12%  Similarity=-0.039  Sum_probs=98.0

Q ss_pred             cEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee--CCeEEEEECCCCceec
Q psy2671         209 AVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIG  285 (573)
Q Consensus       209 ~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~  285 (573)
                      ....|++.+.++.|. +-...+.|.+.++..................|++.|.+.+|+.+.+  .+.|.+.++...... 
T Consensus       472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-  550 (791)
T 3m0c_C          472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-  550 (791)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-
T ss_pred             CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-
Confidence            345788888775554 5556789999998765433333334445789999998777766553  267888888644321 


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTIK  363 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i~  363 (573)
                      ......-.+..+|++.+.    .++++++-...+.|...++........+..  .......+++..+.++++-...+.|.
T Consensus       551 ~lv~~~l~~P~GLavD~~----~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~  626 (791)
T 3m0c_C          551 SLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF  626 (791)
T ss_dssp             EEECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEE
T ss_pred             EEEeCCCCCceEEEEecC----CCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEE
Confidence            222222345667776542    334555555667888888765443333332  22344566665554555555667888


Q ss_pred             EEeCCCCeeeEec
Q psy2671         364 VWRASDGVMCRTL  376 (573)
Q Consensus       364 vw~~~~~~~~~~~  376 (573)
                      ..+..+|.....+
T Consensus       627 ~~dk~tG~~~~~l  639 (791)
T 3m0c_C          627 SANRLTGSDVNLL  639 (791)
T ss_dssp             EEETTTCCCCEEE
T ss_pred             EEeCCCCcceEEe
Confidence            7776666544433

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.12  E-value=0.23  Score=48.51  Aligned_cols=246  Identities=9%  Similarity=0.022  Sum_probs=130.3

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE-eeCCeEEEEECCCCc---eecccccCCcccEE
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG-CKNGVIHAWDSSTGK---QIGQPMRGHKQWIT  296 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg-s~dg~i~vwd~~~~~---~~~~~~~~h~~~v~  296 (573)
                      +|+.+. ...|+..++......... .....+..|+|++.+..|+-+ ...+.|+.+++....   ..............
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~  162 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD  162 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred             eeEEec-cceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence            444443 468888888765433333 334567899999876666654 456789989886522   11111111223345


Q ss_pred             EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEEEEeC--CCeEEEEeCCCCeee
Q psy2671         297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIYSASQ--DRTIKVWRASDGVMC  373 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~s~s~--d~~i~vw~~~~~~~~  373 (573)
                      ++++.+.    .++.+.+-...+.|.+.++........+.........+++.+ .+.|+...+  .+.|...++......
T Consensus       163 glavD~~----~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~  238 (400)
T 3p5b_L          163 GLAVDWI----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY  238 (400)
T ss_dssp             EEEEETT----TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred             cEEEEec----CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence            5555431    234556666677888888765544444443444567888876 456655543  356777666532222


Q ss_pred             EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccc-
Q psy2671         374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKS-  452 (573)
Q Consensus       374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~-  452 (573)
                      ........+-+.++++++                                    .+.+.++-...+.|..+|+...... 
T Consensus       239 ~~~~~~l~~P~glavd~~------------------------------------~~~lY~aD~~~~~I~~~d~dG~~~~~  282 (400)
T 3p5b_L          239 SLVTENIQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRKT  282 (400)
T ss_dssp             EEECSSCSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred             EEEECCCCceEEEEEEeC------------------------------------CCEEEEEECCCCEEEEEeCCCCccEE
Confidence            222222223344444321                                    1233334445567777776543221 


Q ss_pred             eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEE
Q psy2671         453 LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA  509 (573)
Q Consensus       453 ~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~  509 (573)
                      +....+.-.....|++. .+.++.+-...+.|..+|..+|+.+..+.........++
T Consensus       283 ~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~  338 (400)
T 3p5b_L          283 ILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV  338 (400)
T ss_dssp             EEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred             EEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence            11111111224566763 445666667778899999888876666654333344443

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.12  E-value=0.11  Score=48.47  Aligned_cols=96  Identities=11%  Similarity=0.106  Sum_probs=64.8

Q ss_pred             CCeEEEEcCC---CCccce-eeecccc-----------ccEEEEEECCCCCEEEEeeCC-CcEEEEeCCCCeEEEee--c
Q psy2671         438 DFTLFLWNPE---KEKKSL-ARMTGHQ-----------QLINCVEFSPDGRIIASASFD-KSIKLWDGRIGKFITTL--R  499 (573)
Q Consensus       438 dg~i~lwd~~---~~~~~~-~~~~~h~-----------~~v~~v~~sp~g~~las~s~d-g~i~lwd~~~~~~~~~~--~  499 (573)
                      +..+..+|+.   +++... ..+.+..           ...+.++..++|+..++++.- +.|...+.... .+..+  .
T Consensus        99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~  177 (334)
T 2p9w_A           99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWE  177 (334)
T ss_dssp             CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEEC
T ss_pred             CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeec
Confidence            5667888877   443321 2222111           247899999999999999988 88888776533 22222  1


Q ss_pred             ----CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc
Q psy2671         500 ----GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK  534 (573)
Q Consensus       500 ----~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~  534 (573)
                          ......+.++++|||..|++....+.+..+|+...
T Consensus       178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence                11223567899999998888877999999998743

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=97.08  E-value=0.2  Score=47.19  Aligned_cols=109  Identities=12%  Similarity=0.152  Sum_probs=70.5

Q ss_pred             EEEEEeCCCeEEEEcCCC---C---ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCC-----CCeEEEeec
Q psy2671         431 KLVSGSDDFTLFLWNPEK---E---KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGR-----IGKFITTLR  499 (573)
Q Consensus       431 ~l~sg~~dg~i~lwd~~~---~---~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~-----~~~~~~~~~  499 (573)
                      +++....+|.+..|++..   +   .+..+.+.- ...+..+.+.+....|..+-.|..|..+|.+     +++.+..+.
T Consensus       145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~  223 (355)
T 3amr_A          145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD  223 (355)
T ss_dssp             EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred             EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence            577777789998887732   1   122233322 3457888999988899999998777777755     345554442


Q ss_pred             -CCc-ceEEEEEE--CCCCC-EEEEEe-CCCcEEEEeCC-cccccccc
Q psy2671         500 -GHV-QAVYMVAW--SSDSR-LLVSGS-ADSTLKVWNMK-TKKIEQDL  540 (573)
Q Consensus       500 -~h~-~~v~~v~~--s~dg~-~las~s-~D~~v~vwd~~-~~~~~~~l  540 (573)
                       ++. ..+..|+.  .++++ +|++++ .+++..+||.. +.+.+..+
T Consensus       224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f  271 (355)
T 3amr_A          224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF  271 (355)
T ss_dssp             SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence             222 24666666  56666 666665 67799999996 44444433

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=96.92  E-value=0.28  Score=46.12  Aligned_cols=214  Identities=12%  Similarity=-0.009  Sum_probs=112.4

Q ss_pred             CCcEEEEECCCCeEEEEecCCCccEEEEEECC-CcEEE-EEeCCCeEEEEeCCCC---ee-eEeccCCcceeeEEEeccC
Q psy2671         318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG-SGLIY-SASQDRTIKVWRASDG---VM-CRTLEGHAHWVNTLALSTD  391 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~l~-s~s~d~~i~vw~~~~~---~~-~~~~~~~~~~v~~~~~s~~  391 (573)
                      ...|+..|+........+. .......++|.+ .+.++ +-...+.|..+++...   .. ...+.........+++.. 
T Consensus         9 ~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~-   86 (316)
T 1ijq_A            9 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW-   86 (316)
T ss_dssp             BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET-
T ss_pred             CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEee-
Confidence            4568888887765554443 334567888875 34554 4455688888887641   11 111110001111222110 


Q ss_pred             ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC
Q psy2671         392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD  471 (573)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~  471 (573)
                                                         ..+...++-...+.|.+.++..... .......-.....++++|.
T Consensus        87 -----------------------------------~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~  130 (316)
T 1ijq_A           87 -----------------------------------IHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPV  130 (316)
T ss_dssp             -----------------------------------TTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETT
T ss_pred             -----------------------------------cCCeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCC
Confidence                                               1234445555667888887754321 1112222235688999996


Q ss_pred             CCEEEEeeC-C-CcEEEEeCCCCeEEEee-cCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCccccccccc--CcCC
Q psy2671         472 GRIIASASF-D-KSIKLWDGRIGKFITTL-RGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKIEQDLP--GHGD  545 (573)
Q Consensus       472 g~~las~s~-d-g~i~lwd~~~~~~~~~~-~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~~~~l~--~h~~  545 (573)
                      +..|..+.. . +.|...+.. |+....+ .........+++++++..|+.+. ..+.|..+|+..........  ..-.
T Consensus       131 ~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~  209 (316)
T 1ijq_A          131 HGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLA  209 (316)
T ss_dssp             TTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTS
T ss_pred             CCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccC
Confidence            665554443 2 678888764 3333332 22334577899998877666554 56789999987533211111  1122


Q ss_pred             CEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         546 EVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      ...++++.. +..+++-...+.|..+
T Consensus       210 ~P~giav~~-~~ly~~d~~~~~V~~~  234 (316)
T 1ijq_A          210 HPFSLAVFE-DKVFWTDIINEAIFSA  234 (316)
T ss_dssp             SEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred             CcEEEEEEC-CEEEEEECCCCeEEEE
Confidence            345666643 4444444444555443

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.88  E-value=0.01  Score=62.98  Aligned_cols=241  Identities=10%  Similarity=0.011  Sum_probs=117.6

Q ss_pred             CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCC---ceecccccCCcccEEEEEeccc
Q psy2671         228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTG---KQIGQPMRGHKQWITALSWEPF  303 (573)
Q Consensus       228 d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~---~~~~~~~~~h~~~v~~~~~~~~  303 (573)
                      .+.|+..++.+......... ...+..|+|++.+..|+.+. ..+.|+.+++...   ......+...-....++++.+ 
T Consensus       385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~-  462 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW-  462 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC-
T ss_pred             ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe-
Confidence            45777778776543322222 23456789998777776654 4578999988651   111111111111223344332 


Q ss_pred             ccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCC--CeEEEEeCCCCeeeEeccCCc
Q psy2671         304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQD--RTIKVWRASDGVMCRTLEGHA  380 (573)
Q Consensus       304 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~~  380 (573)
                         ..++++++-...+.|.+.++........+.........+++.+. +.||.+...  +.|..+++.............
T Consensus       463 ---~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l  539 (699)
T 1n7d_A          463 ---IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI  539 (699)
T ss_dssp             ---SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC
T ss_pred             ---eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC
Confidence               12344555556678888887654433333322234456677653 444444322  455555443211111111111


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC-CcEEEEEeCCCeEEEEcCCCCccc-eeeecc
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE-GEKLVSGSDDFTLFLWNPEKEKKS-LARMTG  458 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~  458 (573)
                      .+-+.+++                                     .|. +.+.++-+..+.|..+++...... +....+
T Consensus       540 ~~PnGlav-------------------------------------d~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~  582 (699)
T 1n7d_A          540 QWPNGITL-------------------------------------DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK  582 (699)
T ss_dssp             SSCCCEEE-------------------------------------CTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSS
T ss_pred             CCccEEEE-------------------------------------eccCCEEEEEecCCCeEEEEccCCCceEEEEecCC
Confidence            11122222                                     232 344455556678888887542211 111101


Q ss_pred             ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       459 h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                      .-.....|++..+ .++++....+.|..+|..+++.+..+.......+.|++.
T Consensus       583 ~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~  634 (699)
T 1n7d_A          583 RLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF  634 (699)
T ss_dssp             SCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred             cCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence            1111234555544 556666677899999988888777765433233444433

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=96.75  E-value=0.023  Score=56.42  Aligned_cols=138  Identities=9%  Similarity=0.069  Sum_probs=79.9

Q ss_pred             cEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC-CC----cEEEEeCCCCeEE--EeecCCc
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF-DK----SIKLWDGRIGKFI--TTLRGHV  502 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~-dg----~i~lwd~~~~~~~--~~~~~h~  502 (573)
                      ..|..+...+.|+.+|+....  +..+.........|+|+++|++|..+.. ++    .+...+. .+...  ..+.. .
T Consensus       150 g~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~  225 (430)
T 3tc9_A          150 NHLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-G  225 (430)
T ss_dssp             EEEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-C
T ss_pred             CeEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-C
Confidence            344444444788888876543  2222223345789999999996555543 22    2333442 22211  12211 1


Q ss_pred             ceEEEEEECC-CCCEEEEEeCCCcEEEEeCCccccc--ccccCcCCCEEEEEEccCCCEEEEe-eCCCcEEEcc
Q psy2671         503 QAVYMVAWSS-DSRLLVSGSADSTLKVWNMKTKKIE--QDLPGHGDEVYAVDWAPDGEKVASG-GKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~-dg~~las~s~D~~v~vwd~~~~~~~--~~l~~h~~~v~~~~~s~d~~~l~s~-~~d~~i~iw~  572 (573)
                      .....++++| +|.++++-..++.|..++..++...  ..... ...-..++|+|++++|..+ ...+.|..++
T Consensus       226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~~~~I~~~~  298 (430)
T 3tc9_A          226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVNQHYILRSD  298 (430)
T ss_dssp             SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence            2235678999 6776666667788999999866541  12222 1345789999999955444 4556666653

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=96.74  E-value=0.39  Score=45.25  Aligned_cols=142  Identities=12%  Similarity=0.199  Sum_probs=84.4

Q ss_pred             CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC----CCe--EEEE-ee---CCeEEEEEC--CCCceec
Q psy2671         218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD----SKQ--LVSG-CK---NGVIHAWDS--STGKQIG  285 (573)
Q Consensus       218 ~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d----g~~--l~sg-s~---dg~i~vwd~--~~~~~~~  285 (573)
                      ...+++....++-+.+||+ +++.+..+..  +.++.|..-|+    |+.  ++.+ .+   +++|.+|++  .++. +.
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~  114 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ  114 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence            3445666667789999999 7777777654  44666666552    322  3333 33   578999966  3432 21


Q ss_pred             cccc-----CCc-ccEEEEEe--cccccCCCCC-EEEEEeCCCcEEEEECC-------CCeEEEEecCCCccEEEEEE-C
Q psy2671         286 QPMR-----GHK-QWITALSW--EPFHLNHQCR-RFASSGKDGAIRIWDVI-------LSQCVRVLTSHTRSVTCIRW-G  348 (573)
Q Consensus       286 ~~~~-----~h~-~~v~~~~~--~~~~~~~~~~-~l~s~~~dg~v~iwd~~-------~~~~~~~~~~h~~~v~~~~~-~  348 (573)
                      ..-.     +.. ..+..++.  .|    ..++ ++....++|.+..|++.       +.+.++.+..-.. +..+.. .
T Consensus       115 ~i~~~~~pv~t~~~~pyGlcly~~~----~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq-~EgcvvDd  189 (355)
T 3amr_A          115 SMTDPDHPIATAINEVYGFTLYHSQ----KTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ-TEGMAADD  189 (355)
T ss_dssp             ECSCTTSCEECCCSSCCCEEEEECT----TTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC-EEEEEEET
T ss_pred             eccccccCcCCCCCCeeEEEEEecC----CCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC-cceEEEcC
Confidence            1100     011 34555554  32    1233 56677888999999882       3355666655443 444444 4


Q ss_pred             CCcEEEEEeCCCeEEEEeCC
Q psy2671         349 GSGLIYSASQDRTIKVWRAS  368 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~  368 (573)
                      ..+.||.+-.+.-|..++.+
T Consensus       190 ~~g~Lyv~eEd~GIw~~da~  209 (355)
T 3amr_A          190 EYGRLYIAEEDEAIWKFSAE  209 (355)
T ss_dssp             TTTEEEEEETTTEEEEEECS
T ss_pred             CCCeEEEecccceEEEEeCC
Confidence            56799999999776666643

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=96.74  E-value=0.82  Score=48.86  Aligned_cols=229  Identities=10%  Similarity=0.041  Sum_probs=117.8

Q ss_pred             CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCce---ecccccCCcccEEEEEecc
Q psy2671         227 GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQ---IGQPMRGHKQWITALSWEP  302 (573)
Q Consensus       227 ~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~---~~~~~~~h~~~v~~~~~~~  302 (573)
                      ....|+..++......... .....+..|+|.+.+..|+ +-...+.|+.+++.....   ....+...-....++++.+
T Consensus       402 n~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~  480 (791)
T 3m0c_C          402 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  480 (791)
T ss_dssp             CBSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred             cccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence            3456777777654432222 2345578999998665555 444567888888864211   1111111122334455443


Q ss_pred             cccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCC-cEEEEEeCC--CeEEEEeCCCCeeeEeccCC
Q psy2671         303 FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-GLIYSASQD--RTIKVWRASDGVMCRTLEGH  379 (573)
Q Consensus       303 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d--~~i~vw~~~~~~~~~~~~~~  379 (573)
                      .    .++++++-...+.|.+.++........+.........|++.+. +.||...+.  +.|...++........+...
T Consensus       481 ~----~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~  556 (791)
T 3m0c_C          481 I----HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN  556 (791)
T ss_dssp             T----TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred             c----CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC
Confidence            1    2345666677788988888755444444444455788888764 566655532  56777776533222222222


Q ss_pred             cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc-
Q psy2671         380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG-  458 (573)
Q Consensus       380 ~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~-  458 (573)
                      ..+.+.|++.+.                                    .+.+.++-.....|...++...... ..+.. 
T Consensus       557 l~~P~GLavD~~------------------------------------~~~LYwaD~~~~~I~~~d~dG~~~~-~v~~~~  599 (791)
T 3m0c_C          557 IQWPNGITLDLL------------------------------------SGRLYWVDSKLHSISSIDVNGGNRK-TILEDE  599 (791)
T ss_dssp             CSCEEEEEEETT------------------------------------TTEEEEEETTTTEEEEEETTSCSCE-EEEECT
T ss_pred             CCCceEEEEecC------------------------------------CCeEEEEeCCCCcEEEEecCCCceE-EEecCC
Confidence            233344444321                                    1233333344456666666433221 11111 


Q ss_pred             -ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         459 -HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       459 -h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                       .-.....|++.. ++++++-...+.|...|..+|+.+..+
T Consensus       600 ~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l  639 (791)
T 3m0c_C          600 KRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL  639 (791)
T ss_dssp             TTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred             CccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEe
Confidence             111234566643 345555556678888887777554444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.70  E-value=0.59  Score=46.63  Aligned_cols=153  Identities=12%  Similarity=0.101  Sum_probs=84.6

Q ss_pred             cEEEEEEcC-CCCeEEEE-eCCCeEEEEECCCCeeeEEecC---CCCcEEEEEE-------cCCCCeEEEEeeCC-----
Q psy2671         209 AVISVKFSP-NGRSLASG-SGDTTVRFWDVTTQTPLFKCEG---HKHWVLCIAW-------SPDSKQLVSGCKNG-----  271 (573)
Q Consensus       209 ~V~~~~fsp-~g~~las~-s~d~~i~iwd~~~~~~~~~~~~---h~~~V~~v~~-------s~dg~~l~sgs~dg-----  271 (573)
                      ....++|+| +...|..+ ...+.|++.|..++........   .......++|       +++|++|+.+...+     
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            467899999 34445444 4457899999888765433322   1234789999       99999777776654     


Q ss_pred             --eEEEEECCC-Cceec----ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECC-------CCeE------
Q psy2671         272 --VIHAWDSST-GKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI-------LSQC------  331 (573)
Q Consensus       272 --~i~vwd~~~-~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~-------~~~~------  331 (573)
                        .|.+.+... |....    ..+.. -....+++..|    ..+.++++-..++.|..+|+.       ++..      
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp----~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~  294 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHP----INGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK  294 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECT----TTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred             CceEEEEecCCCCceeecccceeecc-CCCceEEEEcC----CCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence              255665433 22110    00100 00111222222    134566677778888888876       3332      


Q ss_pred             -----EEE-ec-CCCccEEEEEECCCcE-EEEE-eCCCeEEEEe
Q psy2671         332 -----VRV-LT-SHTRSVTCIRWGGSGL-IYSA-SQDRTIKVWR  366 (573)
Q Consensus       332 -----~~~-~~-~h~~~v~~~~~~~~~~-l~s~-s~d~~i~vw~  366 (573)
                           ... +. ........++|++++. ++.+ +..+.|+.++
T Consensus       295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid  338 (496)
T 3kya_A          295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD  338 (496)
T ss_dssp             GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence                 111 11 1223456788888773 4544 3456666644

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=96.68  E-value=0.051  Score=50.79  Aligned_cols=144  Identities=13%  Similarity=0.122  Sum_probs=93.2

Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeecc----c--cccEEEEEE---CCCCCEEEEee-------------CCCcEEE
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTG----H--QQLINCVEF---SPDGRIIASAS-------------FDKSIKL  486 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~----h--~~~v~~v~~---sp~g~~las~s-------------~dg~i~l  486 (573)
                      +..+++.-..++|..|++..+......+.+    .  ...+..|.+   .|+++++++..             .+..+..
T Consensus        25 g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~  104 (334)
T 2p9w_A           25 QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHS  104 (334)
T ss_dssp             TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEE
T ss_pred             CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEE
Confidence            445555558999999998744322112222    1  113578999   68988888643             2677999


Q ss_pred             EeCC---CCeEEEeec--CC-----------cceEEEEEECCCCCEEEEEeCC-CcEEEEeCCcccccc---cc--cCcC
Q psy2671         487 WDGR---IGKFITTLR--GH-----------VQAVYMVAWSSDSRLLVSGSAD-STLKVWNMKTKKIEQ---DL--PGHG  544 (573)
Q Consensus       487 wd~~---~~~~~~~~~--~h-----------~~~v~~v~~s~dg~~las~s~D-~~v~vwd~~~~~~~~---~l--~~h~  544 (573)
                      ||+.   +++.+....  ..           ......++..++|+..++++.- +.|...+........   ..  ....
T Consensus       105 ~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~  184 (334)
T 2p9w_A          105 FNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQR  184 (334)
T ss_dssp             EESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSC
T ss_pred             EcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccc
Confidence            9998   777654332  11           1247899999999998888877 776666665432211   01  1111


Q ss_pred             CCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         545 DEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       545 ~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      -..+.++++|||+.|+....++.|.-++
T Consensus       185 ~G~nGIv~~pdg~~Liv~~~~g~L~~fD  212 (334)
T 2p9w_A          185 PGYSGITFDPHSNKLIAFGGPRALTAFD  212 (334)
T ss_dssp             CSCSEEEEETTTTEEEEESSSSSEEEEE
T ss_pred             cCcceEEEeCCCCEEEEEcCCCeEEEEc
Confidence            2356899999999988887788776553

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.47  E-value=0.013  Score=62.04  Aligned_cols=162  Identities=11%  Similarity=-0.058  Sum_probs=90.9

Q ss_pred             EEEEEcCCC-CeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC--CeEEEEECCCCceeccc
Q psy2671         211 ISVKFSPNG-RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN--GVIHAWDSSTGKQIGQP  287 (573)
Q Consensus       211 ~~~~fsp~g-~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d--g~i~vwd~~~~~~~~~~  287 (573)
                      ..+++.+.+ .+.++-...+.|.+.++..................|+++|++.+|+.+...  +.|.+.++..... ...
T Consensus       456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l  534 (699)
T 1n7d_A          456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL  534 (699)
T ss_dssp             CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEE
T ss_pred             ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEE
Confidence            356777544 444444566789999877654332222222334678999976666655432  6777776643221 111


Q ss_pred             ccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC--CCccEEEEEECCCcEEEEEeCCCeEEEE
Q psy2671         288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS--HTRSVTCIRWGGSGLIYSASQDRTIKVW  365 (573)
Q Consensus       288 ~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~l~s~s~d~~i~vw  365 (573)
                      ....-.+..++++.|.    .++++++-+..+.|..+++........+..  .......+++..+.++++....+.|..+
T Consensus       535 ~~~~l~~PnGlavd~~----~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~  610 (699)
T 1n7d_A          535 VTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSA  610 (699)
T ss_dssp             SCSSCSSCCCEEECTT----TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEE
T ss_pred             EeCCCCCccEEEEecc----CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEE
Confidence            1111223445666542    345566666778888888864332222221  1223344555555666666677889999


Q ss_pred             eCCCCeeeEecc
Q psy2671         366 RASDGVMCRTLE  377 (573)
Q Consensus       366 ~~~~~~~~~~~~  377 (573)
                      +..+|.....+.
T Consensus       611 d~~~G~~~~~i~  622 (699)
T 1n7d_A          611 NRLTGSDVNLLA  622 (699)
T ss_dssp             ETTTEEEEECCC
T ss_pred             EccCCCceEEee
Confidence            887777665553

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=96.30  E-value=0.81  Score=43.70  Aligned_cols=70  Identities=11%  Similarity=0.114  Sum_probs=45.6

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEec---CCCCcEEEEEEcCC---CCeEEEEee-C-----CeEE
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCE---GHKHWVLCIAWSPD---SKQLVSGCK-N-----GVIH  274 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~~---~h~~~V~~v~~s~d---g~~l~sgs~-d-----g~i~  274 (573)
                      ....++|.|+|++++ +..++.|.+++  +++.  +....   ........|+|+||   +..|+.+.. .     +.|.
T Consensus        32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~  108 (352)
T 2ism_A           32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV  108 (352)
T ss_dssp             CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence            467999999998544 56679999998  3332  22221   12345789999998   555655443 2     5677


Q ss_pred             EEECCCC
Q psy2671         275 AWDSSTG  281 (573)
Q Consensus       275 vwd~~~~  281 (573)
                      .++...+
T Consensus       109 r~~~~~~  115 (352)
T 2ism_A          109 RLRHLGE  115 (352)
T ss_dssp             EEEECSS
T ss_pred             EEEeCCC
Confidence            7877643

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.29  E-value=0.21  Score=48.14  Aligned_cols=141  Identities=13%  Similarity=0.115  Sum_probs=87.9

Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccc----cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe--------
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGH----QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK--------  493 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h----~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~--------  493 (573)
                      +.+|..++.+- ++.||.-++.... ..+.+.-.    -..|..+..||+|.+||..+ +..|.|-.+..+.        
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~  105 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSI  105 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccc
Confidence            34555555543 3667766655332 22222211    22577899999999999886 4578887765221        


Q ss_pred             ----EEEeecC------CcceEEEEEECCC---CCEEEEEeCCCcEEEEeCCcccc-cccc---------cCcCCCEEEE
Q psy2671         494 ----FITTLRG------HVQAVYMVAWSSD---SRLLVSGSADSTLKVWNMKTKKI-EQDL---------PGHGDEVYAV  550 (573)
Q Consensus       494 ----~~~~~~~------h~~~v~~v~~s~d---g~~las~s~D~~v~vwd~~~~~~-~~~l---------~~h~~~v~~~  550 (573)
                          ..+.+.-      ...+|..+.|+|-   +..|++-..|++||+||+..... ...+         ......|.++
T Consensus       106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~  185 (452)
T 3pbp_A          106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL  185 (452)
T ss_dssp             HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred             ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence                0112211      2457999999994   55889999999999999975211 0011         2233678999


Q ss_pred             EEccCCCEEEE--eeCCCcEE
Q psy2671         551 DWAPDGEKVAS--GGKDKVLR  569 (573)
Q Consensus       551 ~~s~d~~~l~s--~~~d~~i~  569 (573)
                      +|..++-.|-.  ....|-|+
T Consensus       186 ~Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          186 EFSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             EECTTSSCEEEEECTTSCEEE
T ss_pred             EEcCCCcEEEEEecCCCCCEE
Confidence            99998766655  44777664

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.23  E-value=1.4  Score=45.77  Aligned_cols=228  Identities=11%  Similarity=-0.027  Sum_probs=117.0

Q ss_pred             eEEEEeeCCeEEEEECCCCceec-ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      +|+.+ ..+.|+.-++++..... .++.+ -....++.|.+.    .+..+.+-..++.|+.+++........+......
T Consensus         8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~----~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~   81 (628)
T 4a0p_A            8 FLLFS-RRADIRRISLETNNNNVAIPLTG-VKEASALDFDVT----DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDY   81 (628)
T ss_dssp             EEEEE-ETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred             EEEEE-eCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECC----CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCC
Confidence            44433 56778888887653221 11222 234677887652    3455666667788888887654333333322233


Q ss_pred             EEEEEEC--CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         342 VTCIRWG--GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       342 v~~~~~~--~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      ...+++.  .....++-...+.|.+.++............-..-..+++.+.                            
T Consensus        82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~----------------------------  133 (628)
T 4a0p_A           82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA----------------------------  133 (628)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETT----------------------------
T ss_pred             cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccC----------------------------
Confidence            4455554  3334455555677888776533211111111112233333321                            


Q ss_pred             hheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEe
Q psy2671         420 AKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITT  497 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~  497 (573)
                              .|.+..+-. ..+.|...++.....  ..+...-...+.|+++++++.|..+ ...+.|...|...... ..
T Consensus       134 --------~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v  202 (628)
T 4a0p_A          134 --------EGFMYWTEWGGKPKIDRAAMDGSER--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EV  202 (628)
T ss_dssp             --------TTEEEEEECSSSCEEEEEETTSCSC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred             --------CCeEEEeCCCCCCEEEEEeCCCCce--EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EE
Confidence                    122222221 134555555443221  1111223456889999977666655 4567888888764332 23


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      +.........+++.. +.++++-...+.|...|..+++.
T Consensus       203 ~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~  240 (628)
T 4a0p_A          203 IADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN  240 (628)
T ss_dssp             EEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred             eeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence            322223345677654 44555555577888888766653

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.17  E-value=0.72  Score=43.89  Aligned_cols=124  Identities=11%  Similarity=0.117  Sum_probs=71.6

Q ss_pred             CCeEEEEcCCCCccc---eeeeccc-cccEEEEEECCCCCEEEEeeC-----------------CCcEEEEeCCCCeEEE
Q psy2671         438 DFTLFLWNPEKEKKS---LARMTGH-QQLINCVEFSPDGRIIASASF-----------------DKSIKLWDGRIGKFIT  496 (573)
Q Consensus       438 dg~i~lwd~~~~~~~---~~~~~~h-~~~v~~v~~sp~g~~las~s~-----------------dg~i~lwd~~~~~~~~  496 (573)
                      +.++.+|++......   +..+.+. -...+.+++.++|.+.++...                 .|.|.-+|..  + +.
T Consensus       138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~  214 (355)
T 3sre_A          138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VR  214 (355)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CE
T ss_pred             CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EE
Confidence            456777765443222   1222221 234789999999998887641                 2445555653  2 22


Q ss_pred             eecCCcceEEEEEECCCCCEEEEEe-CCCcEEEEeCCc-ccc--cccccCcCCCEEEEEEcc-CCCEEEEeeCC
Q psy2671         497 TLRGHVQAVYMVAWSSDSRLLVSGS-ADSTLKVWNMKT-KKI--EQDLPGHGDEVYAVDWAP-DGEKVASGGKD  565 (573)
Q Consensus       497 ~~~~h~~~v~~v~~s~dg~~las~s-~D~~v~vwd~~~-~~~--~~~l~~h~~~v~~~~~s~-d~~~l~s~~~d  565 (573)
                      .+......-+.++||||++.|+.+. ..+.|..|++.. ++.  .+.+ ...+..-.++..+ +|+..+++..+
T Consensus       215 ~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          215 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence            2222233467899999998877654 577899999863 322  1122 1123445677787 48776656533

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=95.84  E-value=3.2  Score=46.49  Aligned_cols=139  Identities=11%  Similarity=0.126  Sum_probs=79.0

Q ss_pred             CcEEEEEe----------CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE-e
Q psy2671         429 GEKLVSGS----------DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT-T  497 (573)
Q Consensus       429 ~~~l~sg~----------~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~-~  497 (573)
                      ..+++.|.          ..|.|.+|+....+..+.......++|++++-- +|+++|..  ..++++|+....+.+. .
T Consensus       844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~  920 (1158)
T 3ei3_A          844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTE  920 (1158)
T ss_dssp             CCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEE
T ss_pred             CEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEE
Confidence            35676665          346788888754332222223345667777632 45554433  4789999987654333 1


Q ss_pred             ecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCC--cccccccc-cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMK--TKKIEQDL-PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~--~~~~~~~l-~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ...+ ..+..+.....+.+++.|..-..|.++..+  .+++...- .-+...++++.|-.++ .++.+..+|.+.+.+
T Consensus       921 ~~~~-~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~  996 (1158)
T 3ei3_A          921 CNHY-NNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQ  996 (1158)
T ss_dssp             EEEC-CCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEE
T ss_pred             eecc-ccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEe
Confidence            1111 112222222346789999887777776543  33332111 1234568888887664 677788899887753

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=95.82  E-value=2.1  Score=44.35  Aligned_cols=134  Identities=6%  Similarity=-0.120  Sum_probs=73.7

Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEee-cCCcceE
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTL-RGHVQAV  505 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~-~~h~~~v  505 (573)
                      ++..+++-...+.|+.+++...... ......-.....+++++. +++..+-+..+.|.+.+..... ...+ .......
T Consensus       360 ~~~ly~sD~~~~~I~r~~~~g~~~~-~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P  437 (619)
T 3s94_A          360 EGYIYWTDDEVRAIRRSFIDGSGSQ-FVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEP  437 (619)
T ss_dssp             TTEEEEEETTTTEEEEEETTSCSCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSE
T ss_pred             CCeEEEEeCCCCeEEEEEcCCCccE-EEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCe
Confidence            3445555556778888877643221 112212234568899874 4455555667889999876443 2232 2233456


Q ss_pred             EEEEECCCCCEEEEEe-C-CCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         506 YMVAWSSDSRLLVSGS-A-DSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       506 ~~v~~s~dg~~las~s-~-D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ..+++.|...+|..+. . ...|...++............-...+.|++.++++.|.-+.
T Consensus       438 ~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD  497 (619)
T 3s94_A          438 RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGD  497 (619)
T ss_dssp             EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             eeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEE
Confidence            7899998744444433 2 35666666654332211122223566788887666655443

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=95.74  E-value=1.2  Score=43.06  Aligned_cols=142  Identities=18%  Similarity=0.230  Sum_probs=89.6

Q ss_pred             cCCCCeEEEEeCCCeEEEEECCCCeeeEEecCC----CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecc-----
Q psy2671         216 SPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGH----KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ-----  286 (573)
Q Consensus       216 sp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h----~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~-----  286 (573)
                      ..+|..++.+- ++.||.-++.....-+.+.-.    -..+..+..||+|++||..+ +..|.|-.+..+.....     
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~  106 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ  106 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence            45666666654 578888887754332222221    12477799999999888765 45788888774321100     


Q ss_pred             ------ccc------CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC--eEEEEec---------CCCccEE
Q psy2671         287 ------PMR------GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS--QCVRVLT---------SHTRSVT  343 (573)
Q Consensus       287 ------~~~------~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~---------~h~~~v~  343 (573)
                            .+.      .....|..+.|+|...  .+..|++-..|++||+||+...  ++. .+.         .+...|.
T Consensus       107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~--~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~  183 (452)
T 3pbp_A          107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSY--RDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT  183 (452)
T ss_dssp             HTTEEEEEEGGGCC--CCCCEEEEEECTTBG--GGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred             cccceeEEEcCCcccCCCCceeEEEeccccC--CCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence                  000      1246799999999654  4567999999999999999752  222 222         2235678


Q ss_pred             EEEECCCc-EEEEEe--CCCeE
Q psy2671         344 CIRWGGSG-LIYSAS--QDRTI  362 (573)
Q Consensus       344 ~~~~~~~~-~l~s~s--~d~~i  362 (573)
                      +++|++++ .++..+  ..|-|
T Consensus       184 S~~Fg~~~lTLYvl~~t~~GDI  205 (452)
T 3pbp_A          184 DLEFSKDGLTLYCLNTTEGGDI  205 (452)
T ss_dssp             EEEECTTSSCEEEEECTTSCEE
T ss_pred             EEEEcCCCcEEEEEecCCCCCE
Confidence            88888766 355544  55554

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.49  E-value=1  Score=41.62  Aligned_cols=133  Identities=20%  Similarity=0.255  Sum_probs=67.5

Q ss_pred             CCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671         428 EGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT  496 (573)
Q Consensus       428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~  496 (573)
                      ++..++.|+.+     ..+.+||+.+..-. +..+......-.++.  -++++++.|+.+     ..+..||..+.+...
T Consensus       112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~  189 (301)
T 2vpj_A          112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN  189 (301)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence            34555555543     35778887654321 111111111111222  267888888765     358899988775432


Q ss_pred             e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      .  +.........+.  -++++++.|+.+     ..+.+||+.+.+-  +..++........+.  -+++.++.||.++
T Consensus       190 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~  264 (301)
T 2vpj_A          190 VTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDG  264 (301)
T ss_dssp             ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred             CCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCC
Confidence            2  221111112222  256777777764     4689999977542  222322111122222  2667777777653

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=95.24  E-value=1.9  Score=39.87  Aligned_cols=104  Identities=15%  Similarity=0.190  Sum_probs=54.3

Q ss_pred             CCcEEEEEeCC-----CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671         428 EGEKLVSGSDD-----FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT  496 (573)
Q Consensus       428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~  496 (573)
                      ++..++.|+.+     ..+..||+.+..-.. ..+......-..+.+  ++++++.|+.+     ..+.+||..+.+...
T Consensus       159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~  236 (301)
T 2vpj_A          159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT  236 (301)
T ss_dssp             TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence            34555666544     357788876543211 111111111122222  57788888765     468999998875433


Q ss_pred             e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy2671         497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK  535 (573)
Q Consensus       497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~  535 (573)
                      .  +.........+.  -++++++.|+.+     ..+.+||+.+.+
T Consensus       237 ~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          237 VTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             ECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             CCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence            2  221111112222  267777777765     357788886643

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=94.90  E-value=0.51  Score=47.10  Aligned_cols=140  Identities=9%  Similarity=0.031  Sum_probs=77.7

Q ss_pred             cEEEEEeCCCeEEEEcCCCCccceeeecc---ccccEEEEEE-------CCCCCEEEEeeCCC-------cEEEEeCCC-
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKSLARMTG---HQQLINCVEF-------SPDGRIIASASFDK-------SIKLWDGRI-  491 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~v~~-------sp~g~~las~s~dg-------~i~lwd~~~-  491 (573)
                      .++++-...+.|++.|+....... ....   .......++|       +++|+.|.++...+       .|.+.+... 
T Consensus       153 ~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~  231 (496)
T 3kya_A          153 HLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD  231 (496)
T ss_dssp             EEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT
T ss_pred             EEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC
Confidence            344444444678888876543211 1111   1234789999       99999666665443       266665333 


Q ss_pred             CeEE-----EeecCCcceEEEEEECCCC-CEEEEEeCCCcEEEEeCC-------cccc-----------cccc--cCcCC
Q psy2671         492 GKFI-----TTLRGHVQAVYMVAWSSDS-RLLVSGSADSTLKVWNMK-------TKKI-----------EQDL--PGHGD  545 (573)
Q Consensus       492 ~~~~-----~~~~~h~~~v~~v~~s~dg-~~las~s~D~~v~vwd~~-------~~~~-----------~~~l--~~h~~  545 (573)
                      +...     ..+... .....++++|++ .++++-..++.|..+|+.       ++..           ...+  .+...
T Consensus       232 G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~  310 (496)
T 3kya_A          232 GTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS  310 (496)
T ss_dssp             SCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS
T ss_pred             CceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC
Confidence            2211     111111 123467889954 455556677889999987       4443           1111  11223


Q ss_pred             CEEEEEEccCCCEEEEe-eCCCcEEEc
Q psy2671         546 EVYAVDWAPDGEKVASG-GKDKVLRLW  571 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~-~~d~~i~iw  571 (573)
                      .-+.++|+|+|++|..+ .....|+.+
T Consensus       311 ~p~~ia~~p~G~~lYvaD~~~h~I~ki  337 (496)
T 3kya_A          311 WEFQIFIHPTGKYAYFGVINNHYFMRS  337 (496)
T ss_dssp             CCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             CceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence            45789999999964444 444556553

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=94.68  E-value=0.45  Score=41.43  Aligned_cols=131  Identities=13%  Similarity=0.090  Sum_probs=74.3

Q ss_pred             cEEEEEeCCCeEEEEcCCCCcc--c--eeeeccc--cccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe---------E
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKK--S--LARMTGH--QQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK---------F  494 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~--~--~~~~~~h--~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~---------~  494 (573)
                      .+|....+| +++.=.+.+...  -  ..+..++  =..+..++|+|+|.+.++  .+|.+.-.+..+..         .
T Consensus         5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~   81 (236)
T 1tl2_A            5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKK   81 (236)
T ss_dssp             CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEE
T ss_pred             eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccE
Confidence            455566666 665544443321  0  1111222  124679999999998887  67766666654421         1


Q ss_pred             EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc---c--cc--cCcCCCEEEEEEccCCCEEEEeeCCCc
Q psy2671         495 ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE---Q--DL--PGHGDEVYAVDWAPDGEKVASGGKDKV  567 (573)
Q Consensus       495 ~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~---~--~l--~~h~~~v~~~~~s~d~~~l~s~~~d~~  567 (573)
                      +... +-. ...++.|.|+|.+.++  .||.|+-++..+....   .  ..  .+-=..+..|.|.|+|..-+..  |+.
T Consensus        82 IG~~-Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~  155 (236)
T 1tl2_A           82 IGNG-GWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ  155 (236)
T ss_dssp             EECS-CGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred             eccc-ccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence            1110 111 1357889999988877  5688887776332211   0  01  1011367899999999765555  776


Q ss_pred             EE
Q psy2671         568 LR  569 (573)
Q Consensus       568 i~  569 (573)
                      ++
T Consensus       156 ly  157 (236)
T 1tl2_A          156 FY  157 (236)
T ss_dssp             EE
T ss_pred             EE
Confidence            53

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=94.54  E-value=1.1  Score=42.69  Aligned_cols=135  Identities=10%  Similarity=0.112  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCCC--ccceeeecc-----ccccEEEEEECC--CCC--EEEEeeC--CCcEEEEeCCCC----eEEEeec
Q psy2671         437 DDFTLFLWNPEKE--KKSLARMTG-----HQQLINCVEFSP--DGR--IIASASF--DKSIKLWDGRIG----KFITTLR  499 (573)
Q Consensus       437 ~dg~i~lwd~~~~--~~~~~~~~~-----h~~~v~~v~~sp--~g~--~las~s~--dg~i~lwd~~~~----~~~~~~~  499 (573)
                      .+|.|.++|+.+.  +.....+.+     ..-....+.+.+  +|.  ++++-..  +.+|.+|+....    ..+..+.
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~  160 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR  160 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence            6889999998743  211112222     123456777755  454  4454333  567888765442    2233444


Q ss_pred             CC-cceEEEEEECCCCCEEEEEeC---C------------CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         500 GH-VQAVYMVAWSSDSRLLVSGSA---D------------STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       500 ~h-~~~v~~v~~s~dg~~las~s~---D------------~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      +. ....+.+++.++|.+.++...   |            ..=++|.+..++.. .+...-..-+.++||||++.|..+.
T Consensus       161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~-~~~~~l~~pNGia~spDg~~lYvad  239 (355)
T 3sre_A          161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVR-VVAEGFDFANGINISPDGKYVYIAE  239 (355)
T ss_dssp             CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCE-EEEEEESSEEEEEECTTSSEEEEEE
T ss_pred             cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEE-EeecCCcccCcceECCCCCEEEEEe
Confidence            32 235789999999998887651   1            12334443333322 2222223568899999998876654


Q ss_pred             -CCCcEEEcc
Q psy2671         564 -KDKVLRLWQ  572 (573)
Q Consensus       564 -~d~~i~iw~  572 (573)
                       ..+.|+.|+
T Consensus       240 t~~~~I~~~~  249 (355)
T 3sre_A          240 LLAHKIHVYE  249 (355)
T ss_dssp             GGGTEEEEEE
T ss_pred             CCCCeEEEEE
Confidence             456666653

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=94.41  E-value=3.1  Score=38.39  Aligned_cols=133  Identities=15%  Similarity=0.193  Sum_probs=66.5

Q ss_pred             CCcEEEEEeCCC-----eEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-------CcEEEEeCCCCeE
Q psy2671         428 EGEKLVSGSDDF-----TLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-------KSIKLWDGRIGKF  494 (573)
Q Consensus       428 ~~~~l~sg~~dg-----~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-------g~i~lwd~~~~~~  494 (573)
                      ++..++.|+.++     .+.+||+.+..-. +..+.........+.  -++++++.|+.+       ..+..||..+.+.
T Consensus       108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W  185 (302)
T 2xn4_A          108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATTNEW  185 (302)
T ss_dssp             TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred             CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence            355666666443     5677887654321 111111111111222  267788887653       3488899887654


Q ss_pred             EE--eecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         495 IT--TLRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       495 ~~--~~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                      ..  .+.........+.  -++++++.|+.+     +.+.+||+.+.+-  +..++........+  .-+++.++.||.+
T Consensus       186 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~i~v~GG~~  261 (302)
T 2xn4_A          186 TYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC--AVNGLLYVVGGDD  261 (302)
T ss_dssp             EEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBC
T ss_pred             EECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE--EECCEEEEECCcC
Confidence            32  2221111112222  267777787764     3688999876542  22222111111122  2266777777765


Q ss_pred             C
Q psy2671         566 K  566 (573)
Q Consensus       566 ~  566 (573)
                      +
T Consensus       262 ~  262 (302)
T 2xn4_A          262 G  262 (302)
T ss_dssp             S
T ss_pred             C
Confidence            4

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=93.95  E-value=0.79  Score=43.24  Aligned_cols=114  Identities=16%  Similarity=0.096  Sum_probs=67.3

Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE-eCCCcEEEEECCCCeEEEEecC---
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS-GKDGAIRIWDVILSQCVRVLTS---  337 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~---  337 (573)
                      ..++.++.||.|.-.|..+|+...+........+....- +. ...++..++.. ..||.+..++..++.....+..   
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~-~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l   88 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PS-RLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL   88 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCC-SC-TTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecC-Cc-cccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence            368899999999999999998765432221111111110 00 00122233333 5899999999877744332211   


Q ss_pred             -CCccEEE---EEE------CCCcEEEEEeCCCeEEEEeCCCCeeeEecc
Q psy2671         338 -HTRSVTC---IRW------GGSGLIYSASQDRTIKVWRASDGVMCRTLE  377 (573)
Q Consensus       338 -h~~~v~~---~~~------~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~  377 (573)
                       ...++..   ...      +.++.+++|+.++.+...|+.+|+.+-.+.
T Consensus        89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence             1112221   001      256789999999999999999998876654

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=93.94  E-value=2.3  Score=36.99  Aligned_cols=136  Identities=11%  Similarity=0.071  Sum_probs=74.7

Q ss_pred             eeCCCCcEEEEEeCCCeEEEEcCCCCcc-----ceeee--ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--
Q psy2671         424 AQCPEGEKLVSGSDDFTLFLWNPEKEKK-----SLARM--TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--  494 (573)
Q Consensus       424 ~~~~~~~~l~sg~~dg~i~lwd~~~~~~-----~~~~~--~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--  494 (573)
                      +.+|+|.+.+.  .+|.++-.++.+...     .-..+  .+-.. -.++.|.|+|.+.++  .||.|.-++..+...  
T Consensus        47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~  121 (236)
T 1tl2_A           47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN  121 (236)
T ss_dssp             EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC
T ss_pred             EECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc
Confidence            44576776666  677777777644211     00111  01111 367899999999988  569888787533110  


Q ss_pred             -----EEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc-----cccc--CcCCCEEEEEEccCCCEEEEe
Q psy2671         495 -----ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE-----QDLP--GHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       495 -----~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~-----~~l~--~h~~~v~~~~~s~d~~~l~s~  562 (573)
                           ...-++--..+..|.|.|+|.+.|..  |+.++-+...++...     ...-  +.-..-.-+.|.+++...+..
T Consensus       122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~  199 (236)
T 1tl2_A          122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ  199 (236)
T ss_dssp             HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred             eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence                 11111122457899999999888777  676544333321110     0111  111233346689988765544


Q ss_pred             eCCCcE
Q psy2671         563 GKDKVL  568 (573)
Q Consensus       563 ~~d~~i  568 (573)
                        ++.+
T Consensus       200 --~g~~  203 (236)
T 1tl2_A          200 --GGKF  203 (236)
T ss_dssp             --TTEE
T ss_pred             --CCeE
Confidence              6644

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=93.70  E-value=4.3  Score=37.48  Aligned_cols=132  Identities=14%  Similarity=0.205  Sum_probs=66.0

Q ss_pred             CCcEEEEEeCC------CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeC---------CCcEEEEeCCC
Q psy2671         428 EGEKLVSGSDD------FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASF---------DKSIKLWDGRI  491 (573)
Q Consensus       428 ~~~~l~sg~~d------g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~---------dg~i~lwd~~~  491 (573)
                      ++..++.|+.+      ..+.+||+.+..-. +..+......-..+.  -++++++.|+.         -..+.+||..+
T Consensus       101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~  178 (306)
T 3ii7_A          101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT  178 (306)
T ss_dssp             TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred             CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence            34555666544      35778887764311 111111111111222  26777777764         24488999888


Q ss_pred             CeEEEe--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc--ccccccCcCCCEEEEEEccCCCEEEEe
Q psy2671         492 GKFITT--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK--IEQDLPGHGDEVYAVDWAPDGEKVASG  562 (573)
Q Consensus       492 ~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~--~~~~l~~h~~~v~~~~~s~d~~~l~s~  562 (573)
                      .+....  +.........+.+  ++++++.|+.+     ..+.+||+.+.+  .+..++.......++.+  +++.++.|
T Consensus       179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G  254 (306)
T 3ii7_A          179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLA  254 (306)
T ss_dssp             TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEE
T ss_pred             CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEe
Confidence            754322  2211111122222  66777777654     358899987754  22233322222223333  66777778


Q ss_pred             eCC
Q psy2671         563 GKD  565 (573)
Q Consensus       563 ~~d  565 (573)
                      |.+
T Consensus       255 G~~  257 (306)
T 3ii7_A          255 GFQ  257 (306)
T ss_dssp             CBC
T ss_pred             CcC
Confidence            755

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=93.67  E-value=3.1  Score=38.60  Aligned_cols=133  Identities=13%  Similarity=0.202  Sum_probs=66.5

Q ss_pred             CCcEEEEEeCC-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEE
Q psy2671         428 EGEKLVSGSDD-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFIT  496 (573)
Q Consensus       428 ~~~~l~sg~~d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~  496 (573)
                      ++..++.|+.+     ..+..||+.+..-. +..+......-..+.+  ++++++.|+.+     ..+..||..+.+...
T Consensus       121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~  198 (308)
T 1zgk_A          121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM  198 (308)
T ss_dssp             TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred             CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence            34555555433     35777887654311 1111111111122222  67788888765     358899988765432


Q ss_pred             e--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         497 T--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       497 ~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                      .  +........++.+  ++++++.|+.+     ..+.+||+.+.+-  +..++........+.  -+++.++.||.++
T Consensus       199 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~  273 (308)
T 1zgk_A          199 ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDG  273 (308)
T ss_dssp             CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred             CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCC
Confidence            2  2111111122222  67777777765     4589999877543  222322111112222  2567777777553

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=93.54  E-value=4.5  Score=37.24  Aligned_cols=63  Identities=19%  Similarity=0.290  Sum_probs=38.1

Q ss_pred             CCCEEEEeeCCC-----cEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCC-----cEEEEeCCccc
Q psy2671         471 DGRIIASASFDK-----SIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADS-----TLKVWNMKTKK  535 (573)
Q Consensus       471 ~g~~las~s~dg-----~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~-----~v~vwd~~~~~  535 (573)
                      ++++++.|+.++     .+.+||..+.+....  +.........+.  .++++++.|+.++     .+.+||+.+.+
T Consensus       204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            678888887653     688999987654322  211111111222  2677777777653     48899987654

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=93.24  E-value=5.8  Score=37.64  Aligned_cols=59  Identities=15%  Similarity=0.110  Sum_probs=37.5

Q ss_pred             eEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc------cccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI------EQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       504 ~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~------~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ....++| .+|.++++.-..+.|...++.....      ...+..-..++..+++.|||...++..
T Consensus       269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~  333 (352)
T 2ism_A          269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS  333 (352)
T ss_dssp             CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence            3456777 4677776666677777777754331      112212235789999999998766653

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=93.19  E-value=6  Score=37.61  Aligned_cols=72  Identities=10%  Similarity=-0.020  Sum_probs=45.7

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-eeEEec---CCCCcEEEEEEcCC---CCeEEEEee----C----Ce
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-PLFKCE---GHKHWVLCIAWSPD---SKQLVSGCK----N----GV  272 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-~~~~~~---~h~~~V~~v~~s~d---g~~l~sgs~----d----g~  272 (573)
                      .....++|.|+|++ ..+..++.|++++. +++ .+..+.   ........|+|+|+   +..|+.+..    +    ..
T Consensus        29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGRY-LVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTEE-EEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCeE-EEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            34678999999984 45566799999973 444 222221   12345789999998   555554433    2    56


Q ss_pred             EEEEECCCC
Q psy2671         273 IHAWDSSTG  281 (573)
Q Consensus       273 i~vwd~~~~  281 (573)
                      |..|+...+
T Consensus       107 v~r~~~~~~  115 (354)
T 3a9g_A          107 VIRGRLDGS  115 (354)
T ss_dssp             EEEEEECSS
T ss_pred             EEEEEECCC
Confidence            777776543

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=93.07  E-value=11  Score=40.20  Aligned_cols=264  Identities=11%  Similarity=0.100  Sum_probs=134.6

Q ss_pred             CCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCC
Q psy2671         249 KHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVIL  328 (573)
Q Consensus       249 ~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~  328 (573)
                      ...|.+|.-..+|. |-.|+.+| +..||-..-+............|.++....     + ..|-.++.+| +..||..+
T Consensus        21 ~n~V~~I~qD~~G~-lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~-----~-g~lWigT~~G-l~~yd~~~   91 (758)
T 3ott_A           21 ASVVSCFLQDSEGL-IWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIID-----N-TYLYMGTDNG-ILVYNYRA   91 (758)
T ss_dssp             CCCEEEEEECTTSC-EEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEET-----T-TEEEEEETTE-EEEEETTT
T ss_pred             cceEEEEEECCCCC-EEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcC-----C-CcEEEEeCCC-eEEEeCCC
Confidence            45689998888874 55677777 445663221111100011223466654322     2 3455556555 67889876


Q ss_pred             CeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc---C-CcceeeEEEeccCceeEEEEcCCCce
Q psy2671         329 SQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE---G-HAHWVNTLALSTDYLMRVEATSTGGF  404 (573)
Q Consensus       329 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~---~-~~~~v~~~~~s~~~~~~~~~~~~~~~  404 (573)
                      .+...........|.++.. .++.++.++.+ -|..++..++.......   + ....|.++..                
T Consensus        92 ~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~----------------  153 (758)
T 3ott_A           92 DRYEQPETDFPTDVRTMAL-QGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIR----------------  153 (758)
T ss_dssp             TEECCCSCCCCSCEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEE----------------
T ss_pred             CEEECcccCCCceEEEEEe-cCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEE----------------
Confidence            6433211112234666654 45677778776 56777776544321100   0 0011111111                


Q ss_pred             eeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeecc----ccccEEEEEECCCCCEEEEeeC
Q psy2671         405 KYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG----HQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~----h~~~v~~v~~sp~g~~las~s~  480 (573)
                                           ..++.+ -.|...| +..++..+..........    ....|.++...+++..|..|+.
T Consensus       154 ---------------------d~~g~l-Wigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~  210 (758)
T 3ott_A          154 ---------------------TKDNQI-YVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE  210 (758)
T ss_dssp             ---------------------CTTCCE-EEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE
T ss_pred             ---------------------cCCCCE-EEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC
Confidence                                 122333 3344444 556665543211111111    1224888888887776555654


Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc-------cCcCCCEEEEEEc
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL-------PGHGDEVYAVDWA  553 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l-------~~h~~~v~~~~~s  553 (573)
                       +-+..+|..+++......-....|.++...++|.+.+ |+. +-+.+++..+++.....       .-....|.++.-.
T Consensus       211 -~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D  287 (758)
T 3ott_A          211 -GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFAD  287 (758)
T ss_dssp             -EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEEC
T ss_pred             -CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEc
Confidence             4588889877654221111234588888888887655 343 45888887665432110       0112468888777


Q ss_pred             cCCCEEEEeeCCC
Q psy2671         554 PDGEKVASGGKDK  566 (573)
Q Consensus       554 ~d~~~l~s~~~d~  566 (573)
                      .+|..-+ |...|
T Consensus       288 ~~g~lWi-GT~~G  299 (758)
T 3ott_A          288 QEHNIWL-GTDYG  299 (758)
T ss_dssp             TTCCEEE-EESSS
T ss_pred             CCCCEEE-EeCCc
Confidence            6665433 33344

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=92.92  E-value=5.8  Score=36.76  Aligned_cols=92  Identities=13%  Similarity=0.177  Sum_probs=49.7

Q ss_pred             CCCCEEEEeeC-C-----CcEEEEeCCCCeEEEe--ecCCcceEEEEEECCCCCEEEEEeCCC-----cEEEEeCCcccc
Q psy2671         470 PDGRIIASASF-D-----KSIKLWDGRIGKFITT--LRGHVQAVYMVAWSSDSRLLVSGSADS-----TLKVWNMKTKKI  536 (573)
Q Consensus       470 p~g~~las~s~-d-----g~i~lwd~~~~~~~~~--~~~h~~~v~~v~~s~dg~~las~s~D~-----~v~vwd~~~~~~  536 (573)
                      -++++++.|+. +     ..+.+||..+.+....  +........++.  -++++++.|+.++     .+.+||+.+.+-
T Consensus       147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W  224 (315)
T 4asc_A          147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKW  224 (315)
T ss_dssp             ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred             ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence            46678888876 2     3588999887653322  211111111222  2677777777654     488899876542


Q ss_pred             --cccccCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         537 --EQDLPGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       537 --~~~l~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                        +..++........+.+  +++.++.||.+
T Consensus       225 ~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~  253 (315)
T 4asc_A          225 APFEAFPQERSSLSLVSL--VGTLYAIGGFA  253 (315)
T ss_dssp             EEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred             EECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence              2222222222222222  56777777764

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=92.64  E-value=1.8  Score=40.91  Aligned_cols=101  Identities=17%  Similarity=0.210  Sum_probs=62.9

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEee----cCCcceEEEEEECCC---CCEEEEE---eCCCcEEEE
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTL----RGHVQAVYMVAWSSD---SRLLVSG---SADSTLKVW  529 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~----~~h~~~v~~v~~s~d---g~~las~---s~D~~v~vw  529 (573)
                      .-..|+|.|||.++++--..|.|++++...++.  +..+    .........|+++||   +.+|...   ..++.|.-|
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~  112 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM  112 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence            357899999999877765589999998765543  2222    122456789999996   3444432   244556666


Q ss_pred             eCCcc-----c-----c-ccccc---CcCCCEEEEEEccCCCEEEEeeC
Q psy2671         530 NMKTK-----K-----I-EQDLP---GHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       530 d~~~~-----~-----~-~~~l~---~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      ....+     .     . +..++   .|.  -..|.|.|||...++.|.
T Consensus       113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~Gd  159 (347)
T 3das_A          113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTGE  159 (347)
T ss_dssp             EBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECBC
T ss_pred             EeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEECC
Confidence            55441     1     1 11122   233  346899999987777653

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=92.51  E-value=6.4  Score=36.24  Aligned_cols=104  Identities=11%  Similarity=0.143  Sum_probs=52.7

Q ss_pred             eEEEEeC--CCeEEEEECCCCeeeE--EecCCCCcEEEEEEcCCCCeEEEEeeC----CeEEEEECCCCceec-ccccCC
Q psy2671         221 SLASGSG--DTTVRFWDVTTQTPLF--KCEGHKHWVLCIAWSPDSKQLVSGCKN----GVIHAWDSSTGKQIG-QPMRGH  291 (573)
Q Consensus       221 ~las~s~--d~~i~iwd~~~~~~~~--~~~~h~~~V~~v~~s~dg~~l~sgs~d----g~i~vwd~~~~~~~~-~~~~~h  291 (573)
                      .++.|+.  ...+.+||..+.+-..  ........-.++.+  ++..++.|+.+    ..+.+||+.+..-.. ..+...
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~   91 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP   91 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence            4455554  3578889988764221  11111111222222  56666777755    678889987764211 111111


Q ss_pred             cccEEEEEecccccCCCCCEEEEEeCC------CcEEEEECCCCeEEE
Q psy2671         292 KQWITALSWEPFHLNHQCRRFASSGKD------GAIRIWDVILSQCVR  333 (573)
Q Consensus       292 ~~~v~~~~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~  333 (573)
                      ...-..+.       .+++.++.||.+      ..+.+||..+.+-..
T Consensus        92 r~~~~~~~-------~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~  132 (306)
T 3ii7_A           92 RDSLAACA-------AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT  132 (306)
T ss_dssp             CBSCEEEE-------ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred             ccceeEEE-------ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence            11111111       134566777655      458888988776443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=91.38  E-value=8.7  Score=35.40  Aligned_cols=103  Identities=16%  Similarity=0.237  Sum_probs=52.9

Q ss_pred             CcEEEEEeCC-----CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC-----CcEEEEeCCCCeEEEe
Q psy2671         429 GEKLVSGSDD-----FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD-----KSIKLWDGRIGKFITT  497 (573)
Q Consensus       429 ~~~l~sg~~d-----g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d-----g~i~lwd~~~~~~~~~  497 (573)
                      +.+++.|+.+     ..+..||+.+..-.. ..+......-..+.+  ++++++.|+.+     ..+.+||+.+.+....
T Consensus       169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~  246 (308)
T 1zgk_A          169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFV  246 (308)
T ss_dssp             TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred             CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence            4555555543     357788876542111 111111111122233  67788888765     4589999887754322


Q ss_pred             --ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCccc
Q psy2671         498 --LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKK  535 (573)
Q Consensus       498 --~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~  535 (573)
                        +.........+.  -++++++.|+.+     ..+.+||+.+.+
T Consensus       247 ~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          247 APMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             CCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence              211111112222  256777777754     347788876643

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=90.89  E-value=10  Score=35.18  Aligned_cols=132  Identities=14%  Similarity=0.240  Sum_probs=64.7

Q ss_pred             CCcEEEEEeCC-------CeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeCCCCe
Q psy2671         428 EGEKLVSGSDD-------FTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDGRIGK  493 (573)
Q Consensus       428 ~~~~l~sg~~d-------g~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~~~~~  493 (573)
                      ++..++.|+.+       ..+.+||+.+..-.. ..+...... .+++. .++++++.|+.+      ..+.+||..+.+
T Consensus       109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~  186 (318)
T 2woz_A          109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD  186 (318)
T ss_dssp             TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred             CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence            35556666643       256778876543111 111100000 11222 467788888742      358899998875


Q ss_pred             EEEe--ecCCcceEEEEEECCCCCEEEEEeCC-----CcEEEEeCCcccc--cccccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         494 FITT--LRGHVQAVYMVAWSSDSRLLVSGSAD-----STLKVWNMKTKKI--EQDLPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       494 ~~~~--~~~h~~~v~~v~~s~dg~~las~s~D-----~~v~vwd~~~~~~--~~~l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      ....  +........++.  -++++++.|+.+     ..+.+||+.+.+-  +..++........+  ..+++.++.||.
T Consensus       187 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~  262 (318)
T 2woz_A          187 WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV--SLAGSLYAIGGF  262 (318)
T ss_dssp             EEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE--EETTEEEEECCB
T ss_pred             EEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE--EECCEEEEECCe
Confidence            4322  221111112222  256777777653     3477889876542  22333222222222  235677777775


Q ss_pred             C
Q psy2671         565 D  565 (573)
Q Consensus       565 d  565 (573)
                      +
T Consensus       263 ~  263 (318)
T 2woz_A          263 A  263 (318)
T ss_dssp             C
T ss_pred             e
Confidence            4

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=90.61  E-value=13  Score=36.09  Aligned_cols=73  Identities=11%  Similarity=0.079  Sum_probs=50.9

Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      --++.+|+.-..+..-+.-|.+++||+.++.++..-+-....|..-+-..+..-++.-...|.|.--.++...
T Consensus       261 Pvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~  333 (494)
T 1bpo_A          261 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN  333 (494)
T ss_dssp             EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred             eeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence            3467788877788888899999999999999887665555566555544444444445567766666665544

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=90.07  E-value=13  Score=35.19  Aligned_cols=59  Identities=19%  Similarity=0.142  Sum_probs=38.0

Q ss_pred             cEEEEEECC-------CCCEEEEeeCCCcEEEEeCCCCeEEEe---ecCCcceEEEEEECCCCCEEEEE
Q psy2671         462 LINCVEFSP-------DGRIIASASFDKSIKLWDGRIGKFITT---LRGHVQAVYMVAWSSDSRLLVSG  520 (573)
Q Consensus       462 ~v~~v~~sp-------~g~~las~s~dg~i~lwd~~~~~~~~~---~~~h~~~v~~v~~s~dg~~las~  520 (573)
                      ....++|..       +|+++++.-..+.|...+...++....   +......+..+++.|||.+.++.
T Consensus       272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~t  340 (353)
T 2g8s_A          272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLT  340 (353)
T ss_dssp             CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred             CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEE
Confidence            466777753       467777666777777777665543322   22223468899999999876643

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=90.05  E-value=2.9  Score=41.37  Aligned_cols=102  Identities=12%  Similarity=0.161  Sum_probs=61.0

Q ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EEeecC------CcceEEEEEECCC---CCEEEEEeC---------
Q psy2671         463 INCVEFSPDGRIIASASFDKSIKLWDGRIGKF--ITTLRG------HVQAVYMVAWSSD---SRLLVSGSA---------  522 (573)
Q Consensus       463 v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~~~~~------h~~~v~~v~~s~d---g~~las~s~---------  522 (573)
                      ...|+|.|+|+++++-...+.|++++..+++.  +..+..      .......|+|+||   +.+|..+..         
T Consensus        29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~  108 (454)
T 1cru_A           29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK  108 (454)
T ss_dssp             EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred             ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence            56899999999887755445799888655543  223321      2356789999995   555444332         


Q ss_pred             ----CCcEEEEeCCcc-------cc-cccccC-cCCCEEEEEEccCCCEEEEeeC
Q psy2671         523 ----DSTLKVWNMKTK-------KI-EQDLPG-HGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       523 ----D~~v~vwd~~~~-------~~-~~~l~~-h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                          ...|.-|+....       +. +..++. .......+.|.|||+..++.+.
T Consensus       109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                234555554321       11 111221 1124678999999987776553

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=89.07  E-value=17  Score=35.74  Aligned_cols=97  Identities=14%  Similarity=0.147  Sum_probs=50.5

Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCcc-ceeeecc------ccccEEEEEECCC----CCEEEEeeC------------C
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEKK-SLARMTG------HQQLINCVEFSPD----GRIIASASF------------D  481 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~------h~~~v~~v~~sp~----g~~las~s~------------d  481 (573)
                      +.|+|.++++-...+.|++++..++.. .+..+..      ....+..|+|+|+    +.+.++-+.            .
T Consensus        34 ~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~  113 (454)
T 1cru_A           34 WGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQ  113 (454)
T ss_dssp             ECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEE
T ss_pred             EcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccc
Confidence            346777666654445788887543322 1222211      2345779999995    444444332            1


Q ss_pred             CcEEEEeCCC--C-----eEEE-eecC-CcceEEEEEECCCCCEEEEEe
Q psy2671         482 KSIKLWDGRI--G-----KFIT-TLRG-HVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       482 g~i~lwd~~~--~-----~~~~-~~~~-h~~~v~~v~~s~dg~~las~s  521 (573)
                      ..|.-|+...  +     +.+. .+.. .......++|.|||.+.++.+
T Consensus       114 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          114 TIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             EEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred             cEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence            2344444321  1     1111 1221 112357899999998777654

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=88.86  E-value=16  Score=34.57  Aligned_cols=60  Identities=17%  Similarity=0.108  Sum_probs=40.4

Q ss_pred             eEEEEEEC-------CCCCEEEEEeCCCcEEEEeCCcc-ccc--cc-ccCcCCCEEEEEEccCCCEEEEee
Q psy2671         504 AVYMVAWS-------SDSRLLVSGSADSTLKVWNMKTK-KIE--QD-LPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       504 ~v~~v~~s-------~dg~~las~s~D~~v~vwd~~~~-~~~--~~-l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ....++|.       .+|.++++.-..+.|...++... +..  .. +.+-...+..+++.|||...++..
T Consensus       260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred             CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence            46678883       57777777767778888888753 221  12 333345789999999998766654

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=88.65  E-value=2.1  Score=42.90  Aligned_cols=120  Identities=16%  Similarity=0.128  Sum_probs=71.9

Q ss_pred             EEEEcCCC----CccceeeeccccccEEEEEECCCCCEEEEee-CCCcEEEEeCCCC------eE-------EEeecCCc
Q psy2671         441 LFLWNPEK----EKKSLARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLWDGRIG------KF-------ITTLRGHV  502 (573)
Q Consensus       441 i~lwd~~~----~~~~~~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lwd~~~~------~~-------~~~~~~h~  502 (573)
                      +.+.|.+.    ... +.....-.+....+.++|||++++.++ .+.++.++|.+..      +.       .....- .
T Consensus       300 v~ViD~~~~~~~~~~-~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-G  377 (638)
T 3sbq_A          300 TPVLDGRKKDGKDSK-FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-G  377 (638)
T ss_dssp             CCEEECSCBTTBCCS-SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-C
T ss_pred             eeEEccccccccCCc-eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-C
Confidence            56666654    222 222222334456789999999987765 6889999997631      11       122221 1


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc----------cccccccCcCCCEEEEE------EccCCCEEEEee
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK----------KIEQDLPGHGDEVYAVD------WAPDGEKVASGG  563 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~----------~~~~~l~~h~~~v~~~~------~s~d~~~l~s~~  563 (573)
                      ..-...+|.++|.-..|--.|..|.-|++...          ..+..+.-|-.+ -.+.      -.|||+||++..
T Consensus       378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             SCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred             CcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence            23567899999955555568999999999653          223333333221 1121      257899998864

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=87.68  E-value=43  Score=38.08  Aligned_cols=196  Identities=8%  Similarity=0.112  Sum_probs=102.6

Q ss_pred             CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCC-eeeEeccCCc----ceeeEEEeccC
Q psy2671         317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDG-VMCRTLEGHA----HWVNTLALSTD  391 (573)
Q Consensus       317 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~-~~~~~~~~~~----~~v~~~~~s~~  391 (573)
                      ...++.|+|+.+...++...-. ..|..=.|-.+..|.-. .+..|-.|++... .+.+.+..|.    ..|.....++ 
T Consensus        84 ag~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~-  160 (1630)
T 1xi4_A           84 AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDA-  160 (1630)
T ss_pred             cCCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCC-
Confidence            3678999999887766654443 34555566665544333 2457888988532 2333333332    1222222222 


Q ss_pred             ceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-E------EeCCCeEEEEcCCCCccceeeeccccccEE
Q psy2671         392 YLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-S------GSDDFTLFLWNPEKEKKSLARMTGHQQLIN  464 (573)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s------g~~dg~i~lwd~~~~~~~~~~~~~h~~~v~  464 (573)
                                                          +.+.++ +      +...|.+.+|..+...  ...+.||.....
T Consensus       161 ------------------------------------~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~  202 (1630)
T 1xi4_A          161 ------------------------------------KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFA  202 (1630)
T ss_pred             ------------------------------------CCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhh
Confidence                                                222222 1      1235788898876432  334555654433


Q ss_pred             EEEEC--C-CCCEEEEeeC---CCcEEEEeCCCC---eE-----EEeecC----CcceEEEEEECCCCCEEEEEeCCCcE
Q psy2671         465 CVEFS--P-DGRIIASASF---DKSIKLWDGRIG---KF-----ITTLRG----HVQAVYMVAWSSDSRLLVSGSADSTL  526 (573)
Q Consensus       465 ~v~~s--p-~g~~las~s~---dg~i~lwd~~~~---~~-----~~~~~~----h~~~v~~v~~s~dg~~las~s~D~~v  526 (573)
                      .+.+.  + ..++++.+..   .+.++|.++...   ..     ...+..    -...-.++..|+.-..+..-+.-|.+
T Consensus       203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~  282 (1630)
T 1xi4_A          203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI  282 (1630)
T ss_pred             eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence            33321  1 1223332222   367888876432   10     000100    01122356777777788888899999


Q ss_pred             EEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         527 KVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       527 ~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                      .+||+.++.++..-+-..+.|...+-+
T Consensus       283 ~~~d~~t~~~i~~~ris~~~iF~~~~~  309 (1630)
T 1xi4_A          283 HLYDLETGTCIYMNRISGETIFVTAPH  309 (1630)
T ss_pred             EEEecccchhhhhccccCCceEEeccC
Confidence            999999998875443334455444433

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=87.62  E-value=1.9  Score=41.10  Aligned_cols=98  Identities=13%  Similarity=0.191  Sum_probs=56.8

Q ss_pred             EEEEEECCCCC-EEEEeeCCCcEEEEeCCCCeEE---Eee----cCCcceEEEEEECCC---CCEEEEE-eC-------C
Q psy2671         463 INCVEFSPDGR-IIASASFDKSIKLWDGRIGKFI---TTL----RGHVQAVYMVAWSSD---SRLLVSG-SA-------D  523 (573)
Q Consensus       463 v~~v~~sp~g~-~las~s~dg~i~lwd~~~~~~~---~~~----~~h~~~v~~v~~s~d---g~~las~-s~-------D  523 (573)
                      ...|+|.|+|+ +++ +...|.|++++.. ++..   ..+    .........++++|+   +.+|..+ +.       .
T Consensus        20 P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           20 PWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             EEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             cEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            57899999999 554 5567999999853 3321   111    112345688999996   4444443 22       2


Q ss_pred             CcEEEEeCCcc-------c-cccccc-----CcCCCEEEEEEccCCCEEEEeeC
Q psy2671         524 STLKVWNMKTK-------K-IEQDLP-----GHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       524 ~~v~vwd~~~~-------~-~~~~l~-----~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      ..|..|++...       + .+..++     .|.  -..+.|.|||...++.+.
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd  149 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGE  149 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECC
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECC
Confidence            34666665432       1 111222     232  346999999976666543

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=87.43  E-value=18  Score=33.38  Aligned_cols=104  Identities=21%  Similarity=0.276  Sum_probs=53.2

Q ss_pred             CCcEEEEEeC-C-----CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCCC-----cEEEEeCCCCeEE
Q psy2671         428 EGEKLVSGSD-D-----FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFDK-----SIKLWDGRIGKFI  495 (573)
Q Consensus       428 ~~~~l~sg~~-d-----g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~dg-----~i~lwd~~~~~~~  495 (573)
                      ++..++.|+. +     ..+.+||+.+..-. +..+......-.++.+  ++++++.|+.++     .+.+||..+.+..
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  225 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA  225 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence            3455566654 2     36778887654211 1111111111112222  678888888665     4888998877543


Q ss_pred             Ee--ecCCcceEEEEEECCCCCEEEEEeCCC--------------cEEEEeCCccc
Q psy2671         496 TT--LRGHVQAVYMVAWSSDSRLLVSGSADS--------------TLKVWNMKTKK  535 (573)
Q Consensus       496 ~~--~~~h~~~v~~v~~s~dg~~las~s~D~--------------~v~vwd~~~~~  535 (573)
                      ..  +.........+.+  ++++++.|+.++              .+.+||+.+.+
T Consensus       226 ~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          226 PFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             EECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             ECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            22  2211111122222  567777777532              36788887654

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=86.03  E-value=40  Score=38.26  Aligned_cols=70  Identities=11%  Similarity=0.085  Sum_probs=42.5

Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Q psy2671         464 NCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT  533 (573)
Q Consensus       464 ~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~  533 (573)
                      -++..|+.-..+..-+.-|.+.++|+.++.++..-+-....|...+-.....-++.....|.|.--.+..
T Consensus       262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~  331 (1630)
T 1xi4_A          262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE  331 (1630)
T ss_pred             eEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence            3567777777777888899999999999987765443344454444333322233333555554444443

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=85.90  E-value=27  Score=33.98  Aligned_cols=217  Identities=9%  Similarity=0.126  Sum_probs=124.6

Q ss_pred             CEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC-CeeeEeccCCcc----eee
Q psy2671         310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD-GVMCRTLEGHAH----WVN  384 (573)
Q Consensus       310 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~-~~~~~~~~~~~~----~v~  384 (573)
                      +.+|.-. ..++.++|+.+.+.++...-.. .|..=.|-.+..|.-. .+..|..|++.. ..+.+.++.|..    .|.
T Consensus        78 ~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QII  154 (494)
T 1bpo_A           78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQII  154 (494)
T ss_dssp             SCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEE
T ss_pred             cEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cCCeeEEecccCCCCchhheecchhcccceEE
Confidence            3444433 6789999999998887765544 4545556555544333 356788898863 234444444432    222


Q ss_pred             EEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEE-EE------eCCCeEEEEcCCCCccceeeec
Q psy2671         385 TLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV-SG------SDDFTLFLWNPEKEKKSLARMT  457 (573)
Q Consensus       385 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-sg------~~dg~i~lwd~~~~~~~~~~~~  457 (573)
                      ....+                                     ++.+.++ +|      ...|.+.+|..+..  ....+.
T Consensus       155 nY~~d-------------------------------------~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ie  195 (494)
T 1bpo_A          155 NYRTD-------------------------------------AKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIE  195 (494)
T ss_dssp             EEEEC-------------------------------------TTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEEC
T ss_pred             EEEEC-------------------------------------CCCCeEEEEeecccCCcccceEEEeecccc--ccchhe
Confidence            22222                                     2222222 11      12367889987653  345667


Q ss_pred             cccccEEEEEECCC---CCEEEEeeC---CCcEEEEeCCCC--------eEEEeec----CCcceEEEEEECCCCCEEEE
Q psy2671         458 GHQQLINCVEFSPD---GRIIASASF---DKSIKLWDGRIG--------KFITTLR----GHVQAVYMVAWSSDSRLLVS  519 (573)
Q Consensus       458 ~h~~~v~~v~~sp~---g~~las~s~---dg~i~lwd~~~~--------~~~~~~~----~h~~~v~~v~~s~dg~~las  519 (573)
                      ||......+.+..+   .++++-+..   .+.++|.++...        +....+.    .-...-.++..|+.-..+..
T Consensus       196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv  275 (494)
T 1bpo_A          196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL  275 (494)
T ss_dssp             CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred             eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence            77654443333221   124444433   268888887432        1111111    11223346788888888888


Q ss_pred             EeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcE
Q psy2671         520 GSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL  568 (573)
Q Consensus       520 ~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i  568 (573)
                      -+.-|.+++||+.++.++..-+--.+.|...+-+.+..-++.....|.|
T Consensus       276 iTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV  324 (494)
T 1bpo_A          276 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV  324 (494)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred             EecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence            8999999999999999876555455667666555555555555566654

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=83.97  E-value=4.6  Score=38.01  Aligned_cols=117  Identities=11%  Similarity=0.181  Sum_probs=65.4

Q ss_pred             CcEEEEEeCCCeEEEEeCCCCeeeEeccCCc-ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHA-HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      ++.++.++.||.|.-.|..+|+..=.++... ..+  +....                 +               ....+
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~--~~~~~-----------------~---------------~~~~~   55 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL--IEIQE-----------------P---------------SRLET   55 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCS--EECCC-----------------S---------------CTTTS
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCc--EEecC-----------------C---------------ccccC
Confidence            3578999999999999999887654443210 000  00000                 0               00012


Q ss_pred             CcEEEEE-eCCCeEEEEcCCCCccceeeecc---ccccEEE---EEE-C----CCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         429 GEKLVSG-SDDFTLFLWNPEKEKKSLARMTG---HQQLINC---VEF-S----PDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       429 ~~~l~sg-~~dg~i~lwd~~~~~~~~~~~~~---h~~~v~~---v~~-s----p~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                      +..++.. ..||.+..++..++......-..   ...++..   ..+ .    ..+..+.+|+.+|++...|.++|+.+.
T Consensus        56 ~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W  135 (339)
T 2be1_A           56 YETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS  135 (339)
T ss_dssp             SEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred             CcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence            2333333 57888888887665332211110   1111111   000 0    134578899999999999999999998


Q ss_pred             eecC
Q psy2671         497 TLRG  500 (573)
Q Consensus       497 ~~~~  500 (573)
                      .+..
T Consensus       136 ~~~~  139 (339)
T 2be1_A          136 AFGP  139 (339)
T ss_dssp             EEST
T ss_pred             EEec
Confidence            8763

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=82.54  E-value=19  Score=33.93  Aligned_cols=125  Identities=12%  Similarity=-0.004  Sum_probs=55.5

Q ss_pred             CeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCC------CcEEEEeC--CCCeEEE--eecCCcceEEE
Q psy2671         439 FTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFD------KSIKLWDG--RIGKFIT--TLRGHVQAVYM  507 (573)
Q Consensus       439 g~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~d------g~i~lwd~--~~~~~~~--~~~~h~~~v~~  507 (573)
                      ..+.+||+.+..-. +..+......-.+++. -++++++.|+.+      ..+..||.  .+.+...  .+.........
T Consensus       168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~  246 (357)
T 2uvk_A          168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG  246 (357)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred             ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence            46888888765321 1111110011012222 256777777643      34677776  4443222  22111111111


Q ss_pred             EEECCCCCEEEEEeCC----------------------CcEEEEeCCccc--ccccccCcCCCEEEEEEccCCCEEEEee
Q psy2671         508 VAWSSDSRLLVSGSAD----------------------STLKVWNMKTKK--IEQDLPGHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       508 v~~s~dg~~las~s~D----------------------~~v~vwd~~~~~--~~~~l~~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      .+...++++++.|+.+                      ..+.+||+.+.+  .+..++.....-.+  ...+++.++.||
T Consensus       247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG  324 (357)
T 2uvk_A          247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGG  324 (357)
T ss_dssp             EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEE
T ss_pred             eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEee
Confidence            1222356777777632                      247789987654  22333322222122  234677888888


Q ss_pred             CCC
Q psy2671         564 KDK  566 (573)
Q Consensus       564 ~d~  566 (573)
                      .++
T Consensus       325 ~~~  327 (357)
T 2uvk_A          325 ETA  327 (357)
T ss_dssp             ECG
T ss_pred             eCC
Confidence            653

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=81.96  E-value=15  Score=36.33  Aligned_cols=101  Identities=15%  Similarity=0.145  Sum_probs=58.4

Q ss_pred             EEEEEECCCCC-EEEEeeCCCcEEEEeCCCC---eEEEeec-----C----CcceEEEEEECCC----CCEEEEEeC--C
Q psy2671         463 INCVEFSPDGR-IIASASFDKSIKLWDGRIG---KFITTLR-----G----HVQAVYMVAWSSD----SRLLVSGSA--D  523 (573)
Q Consensus       463 v~~v~~sp~g~-~las~s~dg~i~lwd~~~~---~~~~~~~-----~----h~~~v~~v~~s~d----g~~las~s~--D  523 (573)
                      -..|+|.|||. .|+++...|.|++++....   ..+..+.     +    .......|+|+|+    +.+.++-+.  +
T Consensus        16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~   95 (463)
T 2wg3_C           16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE   95 (463)
T ss_dssp             EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred             ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence            46899999996 4555677899999975322   1122221     1    1356789999996    444333221  1


Q ss_pred             ----------CcEEEEeCCcc----------cccccc----cCcCCCEEEEEEccCCCEEEEeeCC
Q psy2671         524 ----------STLKVWNMKTK----------KIEQDL----PGHGDEVYAVDWAPDGEKVASGGKD  565 (573)
Q Consensus       524 ----------~~v~vwd~~~~----------~~~~~l----~~h~~~v~~~~~s~d~~~l~s~~~d  565 (573)
                                ..|.-|.+..+          +.+..+    ..|  ....|.|.|||+..++.|..
T Consensus        96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECTTSCEEEEECCT
T ss_pred             CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECCCCcEEEEeCCC
Confidence                      13444555321          111111    134  35789999999877776654

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=81.42  E-value=36  Score=32.00  Aligned_cols=73  Identities=21%  Similarity=0.157  Sum_probs=47.0

Q ss_pred             CcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee--eEEe----cCCCCcEEEEEEcCC---CCeEEEE---eeCCeEEE
Q psy2671         208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKC----EGHKHWVLCIAWSPD---SKQLVSG---CKNGVIHA  275 (573)
Q Consensus       208 ~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~--~~~~----~~h~~~V~~v~~s~d---g~~l~sg---s~dg~i~v  275 (573)
                      ...+.++|.|||+.+++--..|.|++++..+++.  +..+    .........|+|+||   +..|+..   ..++.|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            4568999999998777665589999998665543  2222    122456789999996   3445432   23455666


Q ss_pred             EECCC
Q psy2671         276 WDSST  280 (573)
Q Consensus       276 wd~~~  280 (573)
                      |....
T Consensus       112 ~~~~~  116 (347)
T 3das_A          112 MLYDE  116 (347)
T ss_dssp             EEBCT
T ss_pred             EEeCC
Confidence            66544

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=80.92  E-value=32  Score=31.17  Aligned_cols=50  Identities=16%  Similarity=0.296  Sum_probs=28.1

Q ss_pred             CCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCC
Q psy2671         318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD  369 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~  369 (573)
                      ||.|..|-......+-.-......|..++......++. . |+.+..|-...
T Consensus        41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~   90 (282)
T 3qhy_B           41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNE   90 (282)
T ss_dssp             TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE-E-TTEEEEEECCT
T ss_pred             CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCC
Confidence            89999997543211110011123566666665555555 4 88888887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	573
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-52
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-48
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-41
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-12
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-46
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	7e-41
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-33
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-19
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-07
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-39
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-26
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-26
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-38
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	9e-37
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-33
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-28
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-11
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-34
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-19
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-12
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	1e-11
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	7e-08
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-33
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-12
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-10
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-10
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-07
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-31
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-27
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-17
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-15
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-31
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-26
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	3e-23
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	5e-16
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-12
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-29
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	5e-12
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-29
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-23
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-10
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.004
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.004
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-28
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	7e-27
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-18
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-12
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	9e-08
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-27
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-14
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	6e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-27
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-25
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	7e-24
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-22
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	1e-08
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-06
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-26
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-20
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-15
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.004
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-25
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-20
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-16
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-10
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-08
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-25
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-18
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-18
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-10
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	8e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-25
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-24
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-16
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-13
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-11
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	4e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-24
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-16
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-13
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	9e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	3e-05
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-18
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-14
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-07
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	1e-07
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	3e-17
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-12
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	4e-09
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	2e-06
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-15
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-13
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	1e-12
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	2e-08
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	4e-14
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	7e-08
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	2e-06
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	2e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	3e-05
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	9e-08
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	2e-04
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.002
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	7e-06
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	4e-05
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	2e-04
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	2e-04
d1qnia2	441	b.69.3.1 (A:10-450) Nitrous oxide reductase, N-ter	0.002
d2bgra1	470	b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,	9e-04
d1q7fa_	279	b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (D	0.004

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  179 bits (453), Expect = 3e-52
 Identities = 77/336 (22%), Positives = 129/336 (38%), Gaps = 25/336 (7%)

Query: 195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC 254
           P      ++ GH   V  V F P    + S S D T++ WD  T       +GH   V  
Sbjct: 5   PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

Query: 255 IAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS 314
           I++                 A  +                    +     +        S
Sbjct: 65  ISFDHSG------KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118

Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC 373
           + +D  I++W+V    CV+  T H   V  +R    G LI S S D+T++VW  +     
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 178

Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
             L  H H V  ++ + +      + +TG                 ++ +     G  L+
Sbjct: 179 AELREHRHVVECISWAPESSYSSISEATG-----------------SETKKSGKPGPFLL 221

Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK 493
           SGS D T+ +W+       L  + GH   +  V F   G+ I S + DK++++WD +  +
Sbjct: 222 SGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR 280

Query: 494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
            + TL  H   V  + +   +  +V+GS D T+KVW
Sbjct: 281 CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  168 bits (425), Expect = 4e-48
 Identities = 73/339 (21%), Positives = 130/339 (38%), Gaps = 24/339 (7%)

Query: 234 WDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ 293
           W        +   GH+  V  + + P    +VS  ++  I  WD  TG    + ++GH  
Sbjct: 3   WIPRPP-EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTD 60

Query: 294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLI 353
            +  +S++             + K    + ++        +        +         I
Sbjct: 61  SVQDISFDHSGKLLASCSADMTIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGDHI 116

Query: 354 YSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEE 413
            SAS+D+TIK+W    G   +T  GH  WV  +  + D  +    ++    +      +E
Sbjct: 117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 176

Query: 414 SSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR 473
                            +L           W PE    S++  TG        +    G 
Sbjct: 177 CKA--------------ELREHRHVVECISWAPESSYSSISEATGS----ETKKSGKPGP 218

Query: 474 IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKT 533
            + S S DK+IK+WD   G  + TL GH   V  V + S  + ++S + D TL+VW+ K 
Sbjct: 219 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 278

Query: 534 KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           K+  + L  H   V ++D+      V +G  D+ +++W+
Sbjct: 279 KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  149 bits (377), Expect = 2e-41
 Identities = 78/391 (19%), Positives = 135/391 (34%), Gaps = 78/391 (19%)

Query: 98  PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
           P      ++ GH   V  V F P    + S S D T++ WD  T       +G       
Sbjct: 5   PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQD 64

Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
              +              + + +                  C  +M GH   V SV   P
Sbjct: 65  ISFDH-------------SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMP 111

Query: 218 NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
           NG  + S S D T++ W+V T   +    GH+ WV  +  + D   + S   +  +  W 
Sbjct: 112 NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 171

Query: 278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS 337
            +T +     +R H+  +  +SW P                                ++ 
Sbjct: 172 VATKECK-AELREHRHVVECISWAPES--------------------------SYSSISE 204

Query: 338 HTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVE 397
            T S T         + S S+D+TIK+W  S G+   TL GH +WV  +           
Sbjct: 205 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH-------- 256

Query: 398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT 457
                                          G+ ++S +DD TL +W+  K K+ +  + 
Sbjct: 257 -----------------------------SGGKFILSCADDKTLRVWDY-KNKRCMKTLN 286

Query: 458 GHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
            H+  +  ++F      + + S D+++K+W+
Sbjct: 287 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.7 bits (161), Expect = 1e-12
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 485 KLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
           K W  R       L GH   V  V +     ++VS S D+T+KVW+ +T   E+ L GH 
Sbjct: 1   KEWIPR-PPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59

Query: 545 DEVYAVDWAP 554
           D V  + +  
Sbjct: 60  DSVQDISFDH 69

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 56.7 bits (135), Expect = 2e-09
 Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 72  VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 131
           V        E   ++   +  V  +      + S    A    + K    G  L SGS D
Sbjct: 167 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD 226

Query: 132 TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF 191
            T++ WDV+T   L    G     +V           +L      T  V D   ++    
Sbjct: 227 KTIKMWDVSTGMCLMTLVGHDN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---- 280

Query: 192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 235
                  C  ++  H   V S+ F      + +GS D TV+ W+
Sbjct: 281 -------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  162 bits (411), Expect = 7e-46
 Identities = 68/339 (20%), Positives = 119/339 (35%), Gaps = 42/339 (12%)

Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVL 253
           R   R   ++ GH   + ++ +  + R L S S D  +  WD  T   +        WV+
Sbjct: 42  RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101

Query: 254 CIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFA 313
             A++P    +  G  + +   ++  T +   +  R          +          +  
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG---YLSCCRFLDDNQIV 158

Query: 314 SSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVM 372
           +S  D    +WD+   Q     T HT  V  +       L  S + D + K+W   +G+ 
Sbjct: 159 TSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218

Query: 373 CRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKL 432
            +T  GH   +N +                                        P G   
Sbjct: 219 RQTFTGHESDINAICFF-------------------------------------PNGNAF 241

Query: 433 VSGSDDFTLFLWNPEKEKKSLARMTGHQQL-INCVEFSPDGRIIASASFDKSIKLWDGRI 491
            +GSDD T  L++   +++ +     +    I  V FS  GR++ +   D +  +WD   
Sbjct: 242 ATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301

Query: 492 GKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
                 L GH   V  +  + D   + +GS DS LK+WN
Sbjct: 302 ADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  149 bits (375), Expect = 7e-41
 Identities = 76/328 (23%), Positives = 122/328 (37%), Gaps = 42/328 (12%)

Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
            GH   +  + W  DS+ LVS  ++G +  WDS T  ++   +     W+   ++ P   
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKV-HAIPLRSSWVMTCAYAPSG- 109

Query: 306 NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
           N+       +              +  R L  HT  ++C R+     I ++S D T  +W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169

Query: 366 RASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ 425
               G    T  GH   V                                        + 
Sbjct: 170 DIETGQQTTTFTGHTGDVM-------------------------------------SLSL 192

Query: 426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIK 485
            P+    VSG+ D +  LW+   E       TGH+  IN + F P+G   A+ S D + +
Sbjct: 193 APDTRLFVSGACDASAKLWDVR-EGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251

Query: 486 LWDGRIGKFITTLRGHVQ--AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGH 543
           L+D R  + + T         +  V++S   RLL++G  D    VW+         L GH
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311

Query: 544 GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            + V  +    DG  VA+G  D  L++W
Sbjct: 312 DNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  127 bits (319), Expect = 3e-33
 Identities = 53/305 (17%), Positives = 104/305 (34%), Gaps = 43/305 (14%)

Query: 97  RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFY 156
           R   R   ++ GH   + ++ +  + R L S S D  +  WD  T   +          +
Sbjct: 42  RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS--W 99

Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT------------------- 197
           V       +   V      N   + ++  ++  V   R +                    
Sbjct: 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVT 159

Query: 198 ---------------RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL 242
                          + T++  GH   V+S+  +P+ R   SG+ D + + WDV      
Sbjct: 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR 219

Query: 243 FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ-WITALSWE 301
               GH+  +  I + P+     +G  +     +D    +++      +    IT++S+ 
Sbjct: 220 QTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279

Query: 302 PFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDR 360
                   R   +   D    +WD + +    VL  H   V+C+     G  + + S D 
Sbjct: 280 K-----SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 334

Query: 361 TIKVW 365
            +K+W
Sbjct: 335 FLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 86.3 bits (212), Expect = 4e-19
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 17/179 (9%)

Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
            T++  GH   V+S+  +P+ R   SG+ D + + WDV          G           
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE--------- 226

Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAV---FQVRPVTRCTSSMPGHAEAVISVKFSPN 218
                +D+  +                              T S       + SV FS +
Sbjct: 227 -----SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281

Query: 219 GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
           GR L +G  D     WD           GH + V C+  + D   + +G  +  +  W+
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.3 bits (199), Expect = 2e-17
 Identities = 50/245 (20%), Positives = 84/245 (34%), Gaps = 36/245 (14%)

Query: 330 QCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLAL 388
           +  R L  H   +  + WG    L+ SASQD  + +W +        +   + WV T A 
Sbjct: 46  RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105

Query: 389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
           +                       E +     +                           
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG--------------------- 144

Query: 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
                                 D   I ++S D +  LWD   G+  TT  GH   V  +
Sbjct: 145 --------------YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSL 190

Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
           + + D+RL VSG+ D++ K+W+++     Q   GH  ++ A+ + P+G   A+G  D   
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250

Query: 569 RLWQN 573
           RL+  
Sbjct: 251 RLFDL 255

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (118), Expect = 4e-07
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
                + GH   V  +  + +G ++A+GS D+ ++ W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           +D+ L    +    +    M+T++    L GH  ++YA+ W  D   + S  +D  L +W
Sbjct: 26  ADATLSQITNNIDPVGRIQMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIW 82

Query: 572 Q 572
            
Sbjct: 83  D 83

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 3e-39
 Identities = 77/384 (20%), Positives = 148/384 (38%), Gaps = 64/384 (16%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
           +    + GH + VI+      G  + SGS D T++ W   T   L    GH   V     
Sbjct: 7   KSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM 65

Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
             +     S  +   +   +                 +   +     ++   +R  S  +
Sbjct: 66  RDNIIISGSTDRTLKVWNAE----------TGECIHTLYGHTSTVRCMHLHEKRVVSGSR 115

Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE 377
           D  +R+WD+   QC+ VL  H  +V C+++ G  ++   + D  +KVW         TL+
Sbjct: 116 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG-AYDFMVKVWDPETETCLHTLQ 174

Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437
           GH +                                          +   +G  +VSGS 
Sbjct: 175 GHTNR---------------------------------------VYSLQFDGIHVVSGSL 195

Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
           D ++ +W+ E     +  +TGHQ L + +E   +  I+ S + D ++K+WD + G+ + T
Sbjct: 196 DTSIRVWDVET-GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQT 252

Query: 498 LRGHVQAV-YMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-----GHGDEVYAVD 551
           L+G  +    +     +   +++ S D T+K+W++KT +  ++L      G G  V+ + 
Sbjct: 253 LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIR 312

Query: 552 WAPDGEKVASGGKDK----VLRLW 571
            +      A G ++      L + 
Sbjct: 313 ASNTKLVCAVGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 3e-26
 Identities = 72/396 (18%), Positives = 133/396 (33%), Gaps = 73/396 (18%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
           +    + GH + VI+      G  + SGS D T++ W   T   L    G          
Sbjct: 7   KSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG------- 58

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
                      + +    + + I        +V            +           + +
Sbjct: 59  ----------GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108

Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
            + SGS D T+R WD+ T   L    GH   V C     D +++VSG  + ++  WD  T
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPET 166

Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
              +   ++GH   + +L ++  H+        S   D +IR+WDV    C+  LT H  
Sbjct: 167 ETCL-HTLQGHTNRVYSLQFDGIHV-------VSGSLDTSIRVWDVETGNCIHTLTGHQS 218

Query: 341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
             + +    + ++ S + D T+K+W    G   +TL+G     +                
Sbjct: 219 LTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS---------------- 261

Query: 401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK----SLARM 456
                                          +++ SDD T+ LW+ +  +          
Sbjct: 262 --------------------AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES 301

Query: 457 TGHQQLINCVEFSPDGRIIASASFDKS----IKLWD 488
            G   ++  +  S    + A  S + +    + + D
Sbjct: 302 GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 3e-26
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 10/250 (4%)

Query: 324 WDVILSQCVRVLTSHTRSV-TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
           W     +  +VL  H   V TC+++ G+  I S S D T+KVW A  G   RTL GH   
Sbjct: 1   WRRGELKSPKVLKGHDDHVITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY-QAQCPEGEKLVSGSDDFTL 441
           V +  +  + ++      T             + +      +      +++VSGS D TL
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
            +W+ E  +           +        DGR + S ++D  +K+WD      + TL+GH
Sbjct: 120 RVWDIETGQC---LHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 176

Query: 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
              VY      D   +VSGS D++++VW+++T      L GH      ++       + S
Sbjct: 177 TNRVYS--LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVS 232

Query: 562 GGKDKVLRLW 571
           G  D  +++W
Sbjct: 233 GNADSTVKIW 242

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  142 bits (358), Expect = 5e-38
 Identities = 73/371 (19%), Positives = 128/371 (34%), Gaps = 87/371 (23%)

Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK------------------CE 246
            H   V  VKFS +G  LA+G  + T + + V+  + + +                    
Sbjct: 60  DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118

Query: 247 GHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLN 306
               ++  + +SPD K L +G ++ +I  WD    K +       +   +   +      
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178

Query: 307 HQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVW 365
                  +      +RIWD+   QC   L+      T     G G  I + S DR ++VW
Sbjct: 179 VSGSGDRT------VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232

Query: 366 RASDGVMCRTLE-------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
            +  G +   L+       GH   V ++  +                             
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFT----------------------------- 263

Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK-----------KSLARMTGHQQLINCVE 467
                    +G+ +VSGS D ++ LWN +                     GH+  +  V 
Sbjct: 264 --------RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315

Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA------WSSDSRLLVSGS 521
            + +   I S S D+ +  WD + G  +  L+GH  +V  VA         +  +  +GS
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375

Query: 522 ADSTLKVWNMK 532
            D   ++W  K
Sbjct: 376 GDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  138 bits (348), Expect = 9e-37
 Identities = 71/404 (17%), Positives = 134/404 (33%), Gaps = 68/404 (16%)

Query: 206 HAEAVISVKFSPNGRS---LASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAWS 258
           H++ +       + +S         +     ++          L K   H   V C+ +S
Sbjct: 12  HSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFS 71

Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
            D + L +GC N     +  S G  + + +                 +            
Sbjct: 72  NDGEYLATGC-NKTTQVYRVSDGSLVAR-LSDDSAANKDPENLNTSSSP----------- 118

Query: 319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLE 377
                             S    +  + +   G    + ++DR I++W   +  +   L+
Sbjct: 119 ------------------SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ 160

Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH-----ALAKYQAQCPEGEKL 432
           GH   + +L         V  +     +       + S        +        +G+ +
Sbjct: 161 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI 220

Query: 433 VSGSDDFTLFLWNPEKEK------KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKL 486
            +GS D  + +W+ E               TGH+  +  V F+ DG+ + S S D+S+KL
Sbjct: 221 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 280

Query: 487 WDGRIGK------------FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK 534
           W+ +                  T  GH   V  VA + +   ++SGS D  +  W+ K+ 
Sbjct: 281 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340

Query: 535 KIEQDLPGHGDEVYAVDWA------PDGEKVASGGKDKVLRLWQ 572
                L GH + V +V  A      P+    A+G  D   R+W+
Sbjct: 341 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  129 bits (323), Expect = 3e-33
 Identities = 77/397 (19%), Positives = 131/397 (32%), Gaps = 88/397 (22%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
            H   V  VKFS +G  LA+G  + T + + V+  + + +                    
Sbjct: 60  DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAA------------- 105

Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
                                      P    TSS P     + SV FSP+G+ LA+G+ 
Sbjct: 106 ------------------------NKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 141

Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
           D  +R WD+  +  +   +GH+  +  + + P   +LVSG  +  +  WD      +   
Sbjct: 142 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD------LRTG 195

Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV-------ILSQCVRVLTSHTR 340
                  I              +  A+   D A+R+WD         L       T H  
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255

Query: 341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDG--VMCRTLEGHAHWVNTLALSTDYLMRVE 397
           SV  + +   G  + S S DR++K+W   +                 T     D+++ V 
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSV- 314

Query: 398 ATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT 457
                                     A     E ++SGS D  +  W+ +     L  + 
Sbjct: 315 --------------------------ATTQNDEYILSGSKDRGVLFWDKKSGNP-LLMLQ 347

Query: 458 GHQQLINCV------EFSPDGRIIASASFDKSIKLWD 488
           GH+  +  V         P+  + A+ S D   ++W 
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  113 bits (283), Expect = 5e-28
 Identities = 53/289 (18%), Positives = 96/289 (33%), Gaps = 33/289 (11%)

Query: 98  PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYV 157
           P    TSS P     + SV FSP+G+ LA+G+ D  +R WD+  +  +   +G     Y 
Sbjct: 109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYS 168

Query: 158 NETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSP 217
            +                + +++V     +          +C+ ++              
Sbjct: 169 LDYFP-------------SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 215

Query: 218 NGRSLASGSGDTTVRFWDVTT-------QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN 270
           +G+ +A+GS D  VR WD  T        +      GHK  V  + ++ D + +VSG  +
Sbjct: 216 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 275

Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEP------FHLNHQCRRFASSGKDGAIRIW 324
             +  W+             +                            S  KD  +  W
Sbjct: 276 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 335

Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSG-------LIYSASQDRTIKVWR 366
           D      + +L  H  SV  +             +  + S D   ++W+
Sbjct: 336 DKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.4 bits (155), Expect = 1e-11
 Identities = 27/145 (18%), Positives = 57/145 (39%), Gaps = 28/145 (19%)

Query: 432 LVSGSDDFTLFLWNPEKEKK---SLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
            +    +    L+NP   ++    L +   H  ++ CV+FS DG  +A+   +K+ +++ 
Sbjct: 31  ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYR 89

Query: 489 GRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVY 548
              G  +  L     A       + S                          P     + 
Sbjct: 90  VSDGSLVARLSDDSAANKDPENLNTSSS------------------------PSSDLYIR 125

Query: 549 AVDWAPDGEKVASGGKDKVLRLWQN 573
           +V ++PDG+ +A+G +D+++R+W  
Sbjct: 126 SVCFSPDGKFLATGAEDRLIRIWDI 150

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 53.6 bits (127), Expect = 3e-08
 Identities = 27/148 (18%), Positives = 41/148 (27%), Gaps = 49/148 (33%)

Query: 89  QKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC 148
             ++  +      C  +  GH + V+SV  + N   + SGS D  V FWD  +  PL   
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346

Query: 149 EGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAE 208
           +G                         +   V+ +                         
Sbjct: 347 QG-------------------------HRNSVISVAV----------------------- 358

Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDV 236
                   P     A+GSGD   R W  
Sbjct: 359 -ANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  130 bits (325), Expect = 8e-34
 Identities = 50/354 (14%), Positives = 104/354 (29%), Gaps = 34/354 (9%)

Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD 260
           +++ GH  +VI+         + +G+ D  +R +D   +  L +  GH   V  + ++  
Sbjct: 6   TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
              LVSG  +  +  WD   G         +                  +   +  +D  
Sbjct: 65  G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR----CLDIVEYKNIKYIVTGSRDNT 119

Query: 321 IRIWDV-----------------------ILSQCVRVLTSHTRSVTCIRWGGSGLIYSAS 357
           + +W +                            V VL  H  SV  +   G+ ++ S S
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN-IVVSGS 178

Query: 358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH 417
            D T+ VW  +       L GH   + +     +    + A+     +       E    
Sbjct: 179 YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 238

Query: 418 ALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE-FSPDGRIIA 476
                                                + + H   ++ +  F     I+ 
Sbjct: 239 LQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILV 298

Query: 477 SASFDKSIKLWDGRIGKFI-TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVW 529
           S S +    +++ R GK +   +      ++ V +     L+ +   D    + 
Sbjct: 299 SGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.3 bits (214), Expect = 3e-19
 Identities = 62/388 (15%), Positives = 118/388 (30%), Gaps = 45/388 (11%)

Query: 104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEIT 163
           +++ GH  +VI+         + +G+ D  +R +D   +  L +  G     +  +    
Sbjct: 6   TTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 164 KTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLA 223
             L                     +     +                + +    N + + 
Sbjct: 65  GILV------------SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIV 112

Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ 283
           +GS D T+  W +  ++ +        + L                              
Sbjct: 113 TGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP------------------------- 147

Query: 284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV- 342
             +        +         ++       S   D  + +WDV   +C+ +L+ HT  + 
Sbjct: 148 --EENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY 205

Query: 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
           + I         SAS D TI++W   +G +  TL+GH   V  L LS  +L+   A  + 
Sbjct: 206 STIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSI 265

Query: 403 GFKYDPANPEESSKHALAKYQAQC--PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
                     + S H                LVSGS++    ++N    K   A +    
Sbjct: 266 RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSEN-QFNIYNLRSGKLVHANILKDA 324

Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWD 488
             I  V F     ++A+   D    L  
Sbjct: 325 DQIWSVNFKGK-TLVAAVEKDGQSFLEI 351

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.8 bits (166), Expect = 4e-13
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 7/129 (5%)

Query: 444 WNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQ 503
           + P++       + GH   +       +   + + + DK I+++D    KF+  L GH  
Sbjct: 1   FVPQRTT-----LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDG 54

Query: 504 AVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV-ASG 562
            V+ + ++    L+   +  +       K          +              K   +G
Sbjct: 55  GVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTG 114

Query: 563 GKDKVLRLW 571
            +D  L +W
Sbjct: 115 SRDNTLHVW 123

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.3 bits (157), Expect = 4e-12
 Identities = 53/310 (17%), Positives = 95/310 (30%), Gaps = 48/310 (15%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
           +    + GH   V ++K++  G  L SGS D TVR WD+         EG        + 
Sbjct: 44  KFLLQLSGHDGGVWALKYAHGGI-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 102

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQA------------VFQVRPVTRCTSSMPGHAE 208
              K +  ++     NT  V  +  +                            + GH  
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162

Query: 209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC 268
           +V     S +G  + SGS D T+  WDV     L+   GH   +    +  + K+ +S  
Sbjct: 163 SVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISAS 220

Query: 269 KNGVIHAWDSSTG----------KQIGQPMRGHKQWITALSWEPFHLNHQC--------- 309
            +  I  WD   G            +G      K  ++A +                   
Sbjct: 221 MDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH 280

Query: 310 -------------RRFASSGKDGAIRIWDVILSQCVRV-LTSHTRSVTCIRWGGSGLIYS 355
                             SG +    I+++   + V   +      +  + + G  L+ +
Sbjct: 281 HTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAA 340

Query: 356 ASQDRTIKVW 365
             +D    + 
Sbjct: 341 VEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.1 bits (154), Expect = 1e-11
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
           TTLRGH+ +V       +   +++G+ D  ++V++   KK    L GH   V+A+ +A  
Sbjct: 6   TTLRGHMTSVI-TCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 556 GEKVASGGKDKVLRLWQN 573
           G  V+      V      
Sbjct: 65  GILVSGSTDRTVRVWDIK 82

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.6 bits (124), Expect = 7e-08
 Identities = 5/84 (5%), Positives = 24/84 (28%), Gaps = 4/84 (4%)

Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL-FKCEGHKHWVLCIAW 257
            +     H   + ++       ++     +     +++ +   +          +  + +
Sbjct: 273 YSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNF 332

Query: 258 SPDSKQLVSGCKNG--VIHAWDSS 279
                 + +  K+G   +   D S
Sbjct: 333 KGK-TLVAAVEKDGQSFLEILDFS 355

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score =  127 bits (318), Expect = 6e-33
 Identities = 45/348 (12%), Positives = 86/348 (24%), Gaps = 32/348 (9%)

Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQL-VSGCKN 270
                    +   +    +   DV + T    C    K        +PD++   V     
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD------------ 318
           G I+  D  T K                S   F ++   +   ++               
Sbjct: 62  GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121

Query: 319 GAIRIWDVILSQCVRVLTSHT--RSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
             + ++        + + +    R V  +R    G +Y A     I       G     L
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVAL 179

Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436
               +W      + D L      S                           + +   +  
Sbjct: 180 PLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYT-----------IARFKDDKQDPATAD 227

Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
             +     + +  K          +L      SP          +  +  +D +  K I 
Sbjct: 228 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIK 286

Query: 497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG 544
                    Y VA+      L  G   + L V+N  T +  +++   G
Sbjct: 287 AA-NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 66.7 bits (161), Expect = 2e-12
 Identities = 24/312 (7%), Positives = 60/312 (19%), Gaps = 47/312 (15%)

Query: 116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGTPYLFYVNETEITKTLADVLPLD 173
                    +   +    +   DV + T                      +T   +    
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 174 TLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT--- 230
                  +D+   K            +S       ++ S   SP+G+ + +    T    
Sbjct: 62  --GDIYGIDLDTCK-----NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLN 114

Query: 231 ---------VRFWDVTTQTPLFKCEGHKHW--VLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
                    +  +                   V  +  + D    V+G     +      
Sbjct: 115 DHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK--- 171

Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQC-------------------RRFASSGKDGA 320
           TGK        +       + +  +                        +  A++     
Sbjct: 172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231

Query: 321 IRIWDVILSQCV-RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
               D+   +   +     T                      +  +      + +     
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN-L 290

Query: 380 AHWVNTLALSTD 391
            H    +A    
Sbjct: 291 DHTYYCVAFDKK 302

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 59.4 bits (142), Expect = 4e-10
 Identities = 25/269 (9%), Positives = 59/269 (21%), Gaps = 32/269 (11%)

Query: 92  AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTT------------VRFWDV 139
              +       +S       ++ S   SP+G+ + +    T             +  +  
Sbjct: 70  DTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 129

Query: 140 TTQTPLFKCEGTPYLFYVN-----------ETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188
                       P    V                     DV          + +   +  
Sbjct: 130 ADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGY 189

Query: 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK-CEG 247
           +   V       S     +      +F  + +  A+          D+ T     +    
Sbjct: 190 SAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFAD 249

Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH 307
                     SP     +       +  +D    K I      H  +  A          
Sbjct: 250 LTELYFTGLRSPKDPNQIY-GVLNRLAKYDLKQRKLIKAANLDHTYYCVAFD-------K 301

Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLT 336
           +  +    G    + +++    + V+ + 
Sbjct: 302 KGDKLYLGGTFNDLAVFNPDTLEKVKNIK 330

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 58.6 bits (140), Expect = 6e-10
 Identities = 11/112 (9%), Positives = 29/112 (25%), Gaps = 8/112 (7%)

Query: 468 FSPDGRIIASASFDKSIKLWDGRIGKFITTLR-GHVQAVYMVAWSSD-SRLLVSGSADST 525
                  +   ++  ++ + D        +              + D     V  +    
Sbjct: 4   LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63

Query: 526 LKVWNMKTKKIEQDLP------GHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           +   ++ T K              G  +Y+   +PDG++V +          
Sbjct: 64  IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 50.5 bits (119), Expect = 2e-07
 Identities = 6/66 (9%), Positives = 17/66 (25%), Gaps = 2/66 (3%)

Query: 508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-GHGDEVYAVDWAPDGEKV-ASGGKD 565
            A  +    ++  +  + L V ++ +  + +               APD           
Sbjct: 2   PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61

Query: 566 KVLRLW 571
             +   
Sbjct: 62  GDIYGI 67

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  124 bits (310), Expect = 1e-31
 Identities = 42/373 (11%), Positives = 99/373 (26%), Gaps = 29/373 (7%)

Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP--LFKCEGHKHWVLCIAWSPDSKQ 263
             E +    ++ +   +A    +  V  ++ +      + + + H   V  + W+PDS +
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
           +V+   +   + W           +               +         S         
Sbjct: 66  IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125

Query: 324 WDVILSQCVRVLTSHTRSVTCI-RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
            +     C  +      +V  +     S L+ + S D   +++ A    +          
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185

Query: 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF 442
                                  +     E SS             G ++   S D T+ 
Sbjct: 186 SKM-------------------PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 226

Query: 443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV 502
           L + +K+    A +      +  V F  +  ++A+   D    L+         +  G +
Sbjct: 227 LADADKKMAV-ATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRL 284

Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE----K 558
                 +    +      + D                   H + V  +     G+    +
Sbjct: 285 DVPKQSSQRGLTARERFQNLDKKASSEG-SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQ 343

Query: 559 VASGGKDKVLRLW 571
             + G D  + +W
Sbjct: 344 FCTTGMDGGMSIW 356

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  112 bits (279), Expect = 1e-27
 Identities = 49/439 (11%), Positives = 102/439 (23%), Gaps = 94/439 (21%)

Query: 109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLAD 168
             E +    ++ +   +A    +  V  ++ +                            
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------------------------ 41

Query: 169 VLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGD 228
                                             +  H   V  V ++P+   + +   D
Sbjct: 42  -----------------------------VQVHELKEHNGQVTGVDWAPDSNRIVTCGTD 72

Query: 229 TTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQ 286
                W +  +T               C+ W+P+ K+   G  + VI             
Sbjct: 73  RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWV 132

Query: 287 PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR 346
                K   + +    +H N       S   D   RI+             + + V    
Sbjct: 133 CKHIKKPIRSTVLSLDWHPNSVLLAAGSC--DFKCRIFSA-----------YIKEVEERP 179

Query: 347 WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG---- 402
                         T    +   G +         WV+ +  S +       +       
Sbjct: 180 A------------PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 227

Query: 403 -GFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT-LFLWNPEKEKKSLARMTGHQ 460
                  A    +S+           E   + +G D F  LF ++    K S     G  
Sbjct: 228 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSF---GGRL 284

Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS----RL 516
            +                + DK      G           H  +V  ++  S        
Sbjct: 285 DVPKQSSQRGLTARERFQNLDKKASSE-GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQ 343

Query: 517 LVSGSADSTLKVWNMKTKK 535
             +   D  + +W++++ +
Sbjct: 344 FCTTGMDGGMSIWDVRSLE 362

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.1 bits (198), Expect = 4e-17
 Identities = 38/392 (9%), Positives = 80/392 (20%), Gaps = 80/392 (20%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
                +  H   V  V ++P+   + +   D     W +  +T                 
Sbjct: 42  VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCV 101

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
                              +           Q      C          V+S+ + PN  
Sbjct: 102 RWAPNEKKFAVGSGSRVISICY-------FEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 154

Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
            LA+GS D   R +    +    +                 +                  
Sbjct: 155 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE------------------ 196

Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
                        W+  + +     +    R A    D  + + D      V  L S T 
Sbjct: 197 -------SSSSCGWVHGVCF-----SANGSRVAWVSHDSTVCLADADKKMAVATLASETL 244

Query: 341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
            +  + +     + +A  D    ++         +  G        +             
Sbjct: 245 PLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARE----- 299

Query: 401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
                                              + D              L   + H+
Sbjct: 300 --------------------------------RFQNLDKKASSEGSAAAGAGLD--SLHK 325

Query: 461 QLINCVEFSPDGRI----IASASFDKSIKLWD 488
             ++ +     G+       +   D  + +WD
Sbjct: 326 NSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.9 bits (182), Expect = 4e-15
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 501 HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQ--DLPGHGDEVYAVDWAPDGEK 558
            V+ +   AW+ D   +     +  + ++     K  Q  +L  H  +V  VDWAPD  +
Sbjct: 6   LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65

Query: 559 VASGGKDKVLRLWQN 573
           + + G D+   +W  
Sbjct: 66  IVTCGTDRNAYVWTL 80

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 62.6 bits (150), Expect = 4e-11
 Identities = 37/239 (15%), Positives = 74/239 (30%), Gaps = 9/239 (3%)

Query: 93  VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
             Q      C          V+S+ + PN   LA+GS D   R +    +    +   TP
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183

Query: 153 YLFYVNETEITKTLADVL-----PLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHA 207
           +   +   E+    +           + N   V  + +               +++    
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243

Query: 208 EAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG 267
             +++V F      +A+G     V  +   +        G        +    + +    
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFPVL-FTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF- 301

Query: 268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
            +N    A    +          HK  ++ +S        +C +F ++G DG + IWDV
Sbjct: 302 -QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGG-KAKCSQFCTTGMDGGMSIWDV 358

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 3e-31
 Identities = 39/331 (11%), Positives = 80/331 (24%), Gaps = 50/331 (15%)

Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ-----TPLFKCEGHKHWVLCIAWSP 259
            H E V +V  S   R + +G     V+ WD++            C    +++      P
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107

Query: 260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG 319
           D   L+ G +   +  WD +      +             +           F+      
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC---YALAISPDSKVCFSCCSDGN 164

Query: 320 AIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
                    +   +       +           +++   D T++ W              
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD-LREGRQLQQHDF 223

Query: 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439
              + +L              +                                      
Sbjct: 224 TSQIFSLGYCPTGEWLAVGMESSNV----------------------------------- 248

Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR 499
                     K    ++  H+  +  ++F+  G+   S   D  +  W    G  I    
Sbjct: 249 ----EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS- 303

Query: 500 GHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
               +V     S D + +V+GS D    V+ 
Sbjct: 304 KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 5e-26
 Identities = 33/371 (8%), Positives = 84/371 (22%), Gaps = 48/371 (12%)

Query: 206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV 265
            ++   S   + +G+          +    +           H   V  +  S  ++ + 
Sbjct: 8   GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVY 67

Query: 266 SGCKNGVIHAWDSSTGKQIG----QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
           +G   G +  WD S                  +I +    P   +             +I
Sbjct: 68  TGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP---DGCTLIVGGEASTLSI 123

Query: 322 RIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
                   +    LTS   +   +       +  +                         
Sbjct: 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 183

Query: 382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTL 441
              +    ++   ++                                             
Sbjct: 184 DGASCIDISNDGTKLWTGGLDNTV------------------------------------ 207

Query: 442 FLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH 501
              + +  +    +       I  + + P G  +A      ++++              H
Sbjct: 208 --RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HLH 264

Query: 502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVAS 561
              V  + ++   +  VS   D+ L  W                 V + D + D + + +
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVT 323

Query: 562 GGKDKVLRLWQ 572
           G  DK   +++
Sbjct: 324 GSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.7 bits (244), Expect = 3e-23
 Identities = 48/381 (12%), Positives = 94/381 (24%), Gaps = 95/381 (24%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
            H E V +V  S   R + +G     V+ WD++                           
Sbjct: 49  NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN----------------------- 84

Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
                                                     + S K  P+G +L  G  
Sbjct: 85  ---------------------------KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117

Query: 228 DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQP 287
            +T+  WD+   TP  K E       C A +                +  +     +   
Sbjct: 118 ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS----KVCFSCCSDGNIAVWDLHNQ 173

Query: 288 MRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW 347
               +            +++   +  + G D  +R WD+   + ++     T  +  + +
Sbjct: 174 TLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGY 232

Query: 348 GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD 407
             +G   +   + +       +      L  H   V +L  +                  
Sbjct: 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA------------------ 274

Query: 408 PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVE 467
                                G+  VS   D  L  W            +     +   +
Sbjct: 275 -------------------YCGKWFVSTGKDNLLNAWRTPYGA--SIFQSKESSSVLSCD 313

Query: 468 FSPDGRIIASASFDKSIKLWD 488
            S D + I + S DK   +++
Sbjct: 314 ISVDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (188), Expect = 5e-16
 Identities = 45/267 (16%), Positives = 81/267 (30%), Gaps = 21/267 (7%)

Query: 100 TRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
                        + S K  P+G +L  G   +T+  WD+   TP  K E T        
Sbjct: 87  PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYA 146

Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
             I+            +++                          GH +    +  S +G
Sbjct: 147 LAISP-----------DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195

Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
             L +G  D TVR WD+       +       +  + + P  + L  G ++  +      
Sbjct: 196 TKLWTGGLDNTVRSWDLREGRQ-LQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLH-- 252

Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
             K     +  H+  + +L +         + F S+GKD  +  W       +      +
Sbjct: 253 VNKPDKYQLHLHESCVLSLKFAY-----CGKWFVSTGKDNLLNAWRTPYGASIFQS-KES 306

Query: 340 RSVTCIRWGGSG-LIYSASQDRTIKVW 365
            SV           I + S D+   V+
Sbjct: 307 SSVLSCDISVDDKYIVTGSGDKKATVY 333

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (155), Expect = 8e-12
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 468 FSPDGRI-IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
            + DG++       D  I     R  + I TL  H + V  V  S+ +R + +G     +
Sbjct: 17  VTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCV 74

Query: 527 KVWNMKTKKIEQ-----DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
           KVW++     +      D     + + +    PDG  +  GG+   L +W  
Sbjct: 75  KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 1e-06
 Identities = 18/135 (13%), Positives = 34/135 (25%), Gaps = 56/135 (41%)

Query: 102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE 161
               +  H   V+S+KF+  G+   S   D  +  W       +F+ + +          
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES---------- 306

Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
                                             V  C  S               + + 
Sbjct: 307 --------------------------------SSVLSCDIS--------------VDDKY 320

Query: 222 LASGSGDTTVRFWDV 236
           + +GSGD     ++V
Sbjct: 321 IVTGSGDKKATVYEV 335

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  117 bits (293), Expect = 3e-29
 Identities = 53/418 (12%), Positives = 113/418 (27%), Gaps = 77/418 (18%)

Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE------GHKHWV 252
             ++   H   + SV    +     S SGD  ++ WD          +       HK  +
Sbjct: 6   TANAGKAHDADIFSVSACNSF--TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63

Query: 253 LCIAW-------SPDSKQLVSGCKNGVIHAWDSSTGKQIGQ---------PMRGHKQWIT 296
             +         + +   + +   +G +  +  +   +  +              K    
Sbjct: 64  HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW 123

Query: 297 ALSWEPFHLNHQCRRFASSGKDGAIRIWDVI------------------LSQCVRVLTSH 338
           AL W   +      R  ++   G   IW                     L   V    + 
Sbjct: 124 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP 183

Query: 339 TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA 398
           ++  T +     GLI +   + T+++   S        E     +N            + 
Sbjct: 184 SQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 243

Query: 399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
           +         +    +        +                      P    ++      
Sbjct: 244 SLLAIAHDSNSFGCITLYETEFGERIGSL----------------SVPTHSSQASLGEFA 287

Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYM----VAWSSDS 514
           H   +  + F+  G  + SA +D  ++ WD +  + ITTL  H   + +    +A     
Sbjct: 288 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 347

Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
             L          V+++K  K             +   A   E +     D+ +R ++
Sbjct: 348 DSLAEPG------VFDVKFLK---------KGWRSGMGADLNESLCCVCLDRSIRWFR 390

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.3 bits (157), Expect = 5e-12
 Identities = 40/343 (11%), Positives = 86/343 (25%), Gaps = 71/343 (20%)

Query: 96  VRPVTRCTSSMPGHAEAVISV--KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY 153
            +  +        H   V+    + +     +A+ S    + F+ +T +    K      
Sbjct: 51  DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL 110

Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDIV--------------------YQKQAVFQV 193
               ++ +     A               +                              
Sbjct: 111 DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPT 170

Query: 194 RPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVR------FWDVTTQTPLFKCEG 247
             +     S    ++   SV  S  G  +A+G  + TV+         +           
Sbjct: 171 LELQGTVESPMTPSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMIN 229

Query: 248 HKHWVLCIAWSPDSKQLVSGCKNG---VIHAWDSSTGKQIGQPMRGHKQWITALSWEP-- 302
           + + +  + +SP    L     +     I  +++  G++IG           +L      
Sbjct: 230 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 289

Query: 303 -----FHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW---------- 347
                   N       S+G DG +R WDV   + +  L  H   +               
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 349

Query: 348 ----------------------GGSGLIYSASQDRTIKVWRAS 368
                                   +  +     DR+I+ +R +
Sbjct: 350 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 392

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  115 bits (287), Expect = 7e-29
 Identities = 43/337 (12%), Positives = 95/337 (28%), Gaps = 38/337 (11%)

Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR--GHKQWITALSWEPF 303
           +  K ++  I   P    L+    +G +  +      +    ++   +K  +   ++   
Sbjct: 8   QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN 67

Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK 363
                     +   +          S            +  I   G   + +AS D  I+
Sbjct: 68  TDLQIY--VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIE 125

Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYD---------------P 408
           V    +         + +  NT   +  + M   ++       +                
Sbjct: 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185

Query: 409 ANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN--------------PEKEKKSLA 454
              E   K+ +        E E     S D  + +                  +  +   
Sbjct: 186 TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245

Query: 455 RMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
           + T     +N +EFSP  + + +A  D  I  W+ +  K I           +V  +   
Sbjct: 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSD 304

Query: 515 RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVD 551
            +L   ++D T K        I+Q +  +   +Y + 
Sbjct: 305 NILCLATSDDTFKTN----AAIDQTIELNASSIYIIF 337

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 99.5 bits (246), Expect = 2e-23
 Identities = 39/406 (9%), Positives = 93/406 (22%), Gaps = 87/406 (21%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA 167
              + +  +K  P+   L   S D ++  +    Q                         
Sbjct: 9   APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----------------------- 45

Query: 168 DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG 227
                                                 +   ++   F  N         
Sbjct: 46  -----------------------------NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT 76

Query: 228 DTTVR--FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
                     + + +         +  +C        +L++   +G+I   D        
Sbjct: 77  VQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGV 136

Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
             ++      T +  + F ++    R      +  ++ + + L +        +     I
Sbjct: 137 IAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI 196

Query: 346 RW-----GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
           R              +S D  + V    D            +            R+    
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRC---------HRLNLKD 247

Query: 401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
           T       +                 P  + L +   D  +  WN +  KK +       
Sbjct: 248 TNLAYPVNSI-------------EFSPRHKFLYTAGSDGIISCWNLQTRKK-IKNFAKFN 293

Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY 506
           +  + V+ +    I+  A+ D + K           T+  +  ++Y
Sbjct: 294 E-DSVVKIACSDNILCLATSDDTFKTN----AAIDQTIELNASSIY 334

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.5 bits (142), Expect = 3e-10
 Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 6/101 (5%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
           R        A  V S++FSP  + L +   D  +  W++ T+  +       +    +  
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKI 300

Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
           +     L     +             I Q +  +   I  +
Sbjct: 301 ACSDNILCLATSDDTFKTN-----AAIDQTIELNASSIYII 336

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.5 bits (142), Expect = 3e-10
 Identities = 9/72 (12%), Positives = 23/72 (31%), Gaps = 3/72 (4%)

Query: 495 ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL---PGHGDEVYAVD 551
           +   +     +  +       LL+  S D +L V+    +    DL     +   +   +
Sbjct: 4   VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63

Query: 552 WAPDGEKVASGG 563
           +  + +     G
Sbjct: 64  FIDNTDLQIYVG 75

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 8/42 (19%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 531 MKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ 572
           M+  +IEQ      D +  +   P    +     D  L +++
Sbjct: 1   MQIVQIEQ---APKDYISDIKIIPSKSLLLITSWDGSLTVYK 39

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.5 bits (85), Expect = 0.004
 Identities = 7/43 (16%), Positives = 13/43 (30%), Gaps = 1/43 (2%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT 143
           +   +          VK + +   L   + D T +      QT
Sbjct: 284 KKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.1 bits (84), Expect = 0.004
 Identities = 11/50 (22%), Positives = 20/50 (40%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG 150
           R        A  V S++FSP  + L +   D  +  W++ T+  +     
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score =  114 bits (284), Expect = 2e-28
 Identities = 32/343 (9%), Positives = 79/343 (23%), Gaps = 37/343 (10%)

Query: 205 GHAEAVISVKFSPNGRSLASGSGD--TTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
                +  V+   + +            +  +D  T     K E +   V  +    + K
Sbjct: 40  PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGK 98

Query: 263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL-----NHQCRRFASSGK 317
             V       I   D  TGK         +  IT  +                       
Sbjct: 99  FAVVANDRFEIMTVDLETGKPTVIERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYV 157

Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE 377
             AI ++D+   +     T ++          S  +Y  S                    
Sbjct: 158 MQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE-- 215

Query: 378 GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437
                   + L        +                               GE  ++   
Sbjct: 216 -VVSKPFVIPLIPGSPNPTKLVPRSMTSEA---------------------GEYDLNDMY 253

Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
             +  +     + + +  +     + +             A     +  +D +  K    
Sbjct: 254 KRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK---- 309

Query: 498 LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL 540
           +      +  +  S+D + ++    D  +  + ++  + E+ +
Sbjct: 310 VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score =  109 bits (273), Expect = 7e-27
 Identities = 42/377 (11%), Positives = 85/377 (22%), Gaps = 65/377 (17%)

Query: 215 FSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV--SGCKNG 271
           FSP +G  +A  S        DV+    L         +  +    D+K        +  
Sbjct: 10  FSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGD 66

Query: 272 VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQC 331
            +  +D  TGK           +   +            RF     D       VI    
Sbjct: 67  FLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 126

Query: 332 VRVLTSHTRSVTCIRW----GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLA 387
             ++T  T S                      + I V+      +      ++H      
Sbjct: 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD----- 181

Query: 388 LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPE 447
                                               A   + + L   S        +  
Sbjct: 182 ---------------------------------YAPAFDADSKNLYYLSYRSLDPSPDRV 208

Query: 448 ------KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLW-------DGRIGKF 494
                 +       +       N  +  P      +  +D +           D    + 
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268

Query: 495 ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAP 554
           I  L   +    +      +           L  +++KT+K+        + +  +  + 
Sbjct: 269 IIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EVKNNLTDLRLSA 324

Query: 555 DGEKVASGGKDKVLRLW 571
           D + V     D  +  +
Sbjct: 325 DRKTVMVRKDDGKIYTF 341

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 85.3 bits (209), Expect = 2e-18
 Identities = 33/320 (10%), Positives = 70/320 (21%), Gaps = 56/320 (17%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGD--TTVRFWDVTTQTPLFKCEGTPYLF---------- 155
                +  V+   + +            +  +D  T       E    +F          
Sbjct: 40  PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99

Query: 156 ---------------------------YVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ 188
                                          T+ T +            +      Y  Q
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159

Query: 189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--- 245
           A+       R   +         +  F  + ++L   S  +     D       F+    
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSK 219

Query: 246 ----EGHKHWVLCIAWSPDSKQLVSG---CKNGVIHAWDSSTGKQIGQPMRGHKQWITAL 298
                            P S    +G     +    +   +      + +   +  I   
Sbjct: 220 PFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIY 279

Query: 299 SWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS 357
           S            +  + + G +  +DV      R +T    ++T +R       +    
Sbjct: 280 SVPVHG--EFAAYYQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSADRKTVMVRK 333

Query: 358 QDRTIKVWRASDGVMCRTLE 377
            D  I  +        RT+E
Sbjct: 334 DDGKIYTFPLEKPEDERTVE 353

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 67.2 bits (162), Expect = 1e-12
 Identities = 26/243 (10%), Positives = 59/243 (24%), Gaps = 53/243 (21%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
           R   +         +  F  + ++L   S  +     D       F+    P++  +   
Sbjct: 169 RKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPG 228

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVT-RCTSSMPGHAEAVISVKFSPNG 219
               T      + +   E  ++ +Y++ +   V P   R    +                
Sbjct: 229 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFA 288

Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
                      +  +DV T+    K    K+ +  +  S D K ++              
Sbjct: 289 AYYQGAPEKGVLLKYDVKTR----KVTEVKNNLTDLRLSADRKTVMVR------------ 332

Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
                                                 DG I  + +   +  R + +  
Sbjct: 333 ------------------------------------KDDGKIYTFPLEKPEDERTVETDK 356

Query: 340 RSV 342
           R +
Sbjct: 357 RPL 359

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 52.2 bits (123), Expect = 9e-08
 Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 10/155 (6%)

Query: 84  VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT 143
           +D    +  +     V      +P    +    K  P   +  +G  D    +   +   
Sbjct: 201 LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPIN 260

Query: 144 PLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM 203
                     +   +   I    + +L        E             +      T  +
Sbjct: 261 ----------VDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV 310

Query: 204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT 238
                 +  ++ S + +++     D  +  + +  
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score =  111 bits (277), Expect = 1e-27
 Identities = 28/337 (8%), Positives = 80/337 (23%), Gaps = 15/337 (4%)

Query: 222 LASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDS 278
           + + +    +   D                   +    +P  +    +  K+  +   D 
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63

Query: 279 STGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--T 336
            TG+ +G+ +          S     L+   +  A       + +    +      L   
Sbjct: 64  VTGETLGR-IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122

Query: 337 SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRV 396
                           + + ++D +       D  +     G                  
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED----KPIQSWEAE 178

Query: 397 EATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM 456
                        +           +     + +     +    L   + E  + ++  +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATP--FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236

Query: 457 TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL 516
                       +P             ++ +D      I  +     + Y V  S+D   
Sbjct: 237 RIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGST 293

Query: 517 LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA 553
           +  G A   L  ++ +T + +  +   G+   ++   
Sbjct: 294 VWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 72.9 bits (177), Expect = 2e-14
 Identities = 29/308 (9%), Positives = 76/308 (24%), Gaps = 34/308 (11%)

Query: 106 MPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETE--- 161
           +       +    +P GR   A+ +   ++   D+ T   L + + +     V       
Sbjct: 29  IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88

Query: 162 ITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRS 221
           ++     +   ++    E+     Q   V      T            +  + ++ +G  
Sbjct: 89  LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148

Query: 222 LASGSGDTTVRFWDVTTQTPLFKCEG---------------------HKHWVLCIAWSPD 260
           L     D  V   +  T       +                                  D
Sbjct: 149 LYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208

Query: 261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGA 320
                       +   D  TG+   + +R    +  + +  P                  
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-------YNV 261

Query: 321 IRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGH 379
           +  +D+  +  ++ +     S   +     G  ++       +  + A        ++  
Sbjct: 262 LESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320

Query: 380 AHWVNTLA 387
            +   +LA
Sbjct: 321 GNASMSLA 328

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 49.8 bits (117), Expect = 4e-07
 Identities = 23/162 (14%), Positives = 59/162 (36%), Gaps = 18/162 (11%)

Query: 430 EKLVSGSDDFTLFLWNPEK-EKKSLARMTGHQQLINCVEFSPDGR-IIASASFDKSIKLW 487
           + +++ +    L + + EK     +  +            +P GR   A+ +  +S+   
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61

Query: 488 DGRIGKFITTLRGH-----VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI------ 536
           D   G+ +  +        V++++  A S D + L    +   L++ + + +        
Sbjct: 62  DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121

Query: 537 -----EQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN 573
                 +       ++  + WA DG K+   G+D  +   + 
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEA 163

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 46.3 bits (108), Expect = 6e-06
 Identities = 16/165 (9%), Positives = 37/165 (22%), Gaps = 15/165 (9%)

Query: 94  FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPY 153
            Q   +            A        +       +  T +   D+ T            
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET------------ 228

Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISV 213
              +   E+               +      Y     F +      +        +  SV
Sbjct: 229 -GEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE--KNASIKRVPLPHSYYSV 285

Query: 214 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
             S +G ++  G     +  +D  T     + +   +  + +A  
Sbjct: 286 NVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASV 330

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 2e-27
 Identities = 64/299 (21%), Positives = 107/299 (35%), Gaps = 26/299 (8%)

Query: 203 MPGHAEAVISVK-FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDS 261
           +   +E    V     + + + SG  D T++ WD  T        GH   VLC+ +    
Sbjct: 8   IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67

Query: 262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAI 321
                      I     ST +            +        HL        +  KD +I
Sbjct: 68  I----------ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSI 117

Query: 322 RIWDVILSQCV---RVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG 378
            +WD+     +   RVL  H  +V  + +     I SAS DRTIKVW  S     RTL G
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKY-IVSASGDRTIKVWNTSTCEFVRTLNG 176

Query: 379 HAHWVNTLALSTDYLMRVEATST-GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437
           H   +  L      ++   + +T   +  +        +      +    + +++VSG+ 
Sbjct: 177 HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY 236

Query: 438 DFTLFLWN--------PEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
           D  + +W+               L  +  H   +  ++F  D   I S+S D +I +WD
Sbjct: 237 DGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 2e-25
 Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 26/294 (8%)

Query: 290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG 349
              + +  L ++        ++  S  +D  I+IWD    +C R+LT HT SV C+++  
Sbjct: 13  ETSKGVYCLQYDD-------QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65

Query: 350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA 409
             +I  +S          +  ++   +      ++    +   +   +  S   +     
Sbjct: 66  RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 125

Query: 410 NPEESSKHAL---AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV 466
                 +  +   A       + + +VS S D T+ +WN     + +  + GH++ I C 
Sbjct: 126 TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIAC- 183

Query: 467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTL 526
                 R++ S S D +I+LWD   G  +  L GH + V       D++ +VSG+ D  +
Sbjct: 184 -LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC--IRFDNKRIVSGAYDGKI 240

Query: 527 KVWNMKTKKIEQD---------LPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           KVW++      +          L  H   V+ + +  D  ++ S   D  + +W
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (247), Expect = 7e-24
 Identities = 55/296 (18%), Positives = 97/296 (32%), Gaps = 47/296 (15%)

Query: 106 MPGHAEAVISVK-FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-------------- 150
           +   +E    V     + + + SG  D T++ WD  T        G              
Sbjct: 8   IHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67

Query: 151 ------------TPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTR 198
                                  +      VL L   N   V     +  AV+ +   T 
Sbjct: 68  IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127

Query: 199 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWS 258
            T                 + + + S SGD T++ W+ +T   +    GHK  + C+ + 
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR 187

Query: 259 PDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD 318
                +VSG  +  I  WD   G  +        + +         +    +R  S   D
Sbjct: 188 DR--LVVSGSSDNTIRLWDIECGACL--------RVLEGHEELVRCIRFDNKRIVSGAYD 237

Query: 319 GAIRIWDV---------ILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVW 365
           G I++WD+           + C+R L  H+  V  +++    ++ S+S D TI +W
Sbjct: 238 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIV-SSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.1 bits (237), Expect = 1e-22
 Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 6/243 (2%)

Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
           Q +   +  ++ V C+++     I S  +D TIK+W  +     R L GH   V  L   
Sbjct: 6   QRIHCRSETSKGVYCLQYDDQ-KIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD 64

Query: 390 TDY-LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK 448
               +     ++   +  +      +  H              +V+ S D ++ +W+   
Sbjct: 65  ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS 124

Query: 449 EKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
                 R               D + I SAS D++IK+W+    +F+ TL GH + +   
Sbjct: 125 PTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIAC- 183

Query: 509 AWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVL 568
                 RL+VSGS+D+T+++W+++     + L GH + V       D +++ SG  D  +
Sbjct: 184 -LQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR--CIRFDNKRIVSGAYDGKI 240

Query: 569 RLW 571
           ++W
Sbjct: 241 KVW 243

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 2e-09
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
               ++ GH   +  +++      + SGS D T+R WD+     L   EG   L      
Sbjct: 169 EFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF 226

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
           +  +    ++        +V D+        +    T C  ++  H+  V  ++F  +  
Sbjct: 227 DNKR----IVSGAYDGKIKVWDL--VAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEF 278

Query: 221 SLASGSGDTTVRFWD 235
            + S S D T+  WD
Sbjct: 279 QIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (128), Expect = 1e-08
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)

Query: 450 KKSLARMTGHQQLINCVE-FSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMV 508
           + SL R+    +    V     D + I S   D +IK+WD    +    L GH  +V  +
Sbjct: 2   RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61

Query: 509 AWS 511
            + 
Sbjct: 62  QYD 64

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (111), Expect = 2e-06
 Identities = 29/160 (18%), Positives = 48/160 (30%), Gaps = 28/160 (17%)

Query: 127 SGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQ 186
           S SGD T++ W+ +T   +    G      +   +    L      D  NT  + DI   
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYRDRLVVSGSSD--NTIRLWDIECG 208

Query: 187 KQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTT-------- 238
                              +             + + SG+ D  ++ WD+          
Sbjct: 209 ACLRVLEGHEELVRCIRFDN-------------KRIVSGAYDGKIKVWDLVAALDPRAPA 255

Query: 239 -QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD 277
               L     H   V  + +  D  Q+VS   +  I  WD
Sbjct: 256 GTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 94  FQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWD 138
            +    T C  ++  H+  V  ++F  +   + S S D T+  WD
Sbjct: 251 PRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score =  109 bits (271), Expect = 1e-26
 Identities = 38/369 (10%), Positives = 92/369 (24%), Gaps = 35/369 (9%)

Query: 208 EAVISVKFSPNGRSL-----ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK 262
           E  I    +P+ R +     A  +  T     D      +   +G   ++     + D  
Sbjct: 2   EPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGS 59

Query: 263 QL----------VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE---PFHLNHQC 309
            +            G +   +  +D  T                  ++        + + 
Sbjct: 60  FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119

Query: 310 RRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASD 369
             F       A+ + D+      R+L         I        +   +D ++       
Sbjct: 120 LLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH--IFPTAPDTFFMHCRDGSLAKVAFGT 177

Query: 370 GVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG 429
                   G     +T     +    +   +          P  + K       +   + 
Sbjct: 178 E-------GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKF 230

Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDG 489
              V    +            + +A    H+ L                +  + + + D 
Sbjct: 231 LPAVEALTEAERADGWRPGGWQQVA---YHRALDRIYLLVDQRDEWRHKTASRFVVVLDA 287

Query: 490 RIGKFITTLRGHVQAVYMVAWSSD--SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV 547
           + G+ +         +  +  S D    L    + D TL + + ++ +  + +   G   
Sbjct: 288 KTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGP 346

Query: 548 YAVDWAPDG 556
             +  A  G
Sbjct: 347 QVITTADMG 355

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 90.6 bits (223), Expect = 2e-20
 Identities = 34/337 (10%), Positives = 85/337 (25%), Gaps = 42/337 (12%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLA----------SGSGDTTVRFWDVTTQTPLFKCEG 247
           R    + G    + +   + +G  +A           G     V  +D  T  P    E 
Sbjct: 39  RVIGMIDGGF--LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIEL 96

Query: 248 HKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNH 307
                  +   P    L    K  + + +  +    +        + +  +         
Sbjct: 97  PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT 156

Query: 308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGS-------GLIYSASQDR 360
               F    +DG++            +  +                    G +   +   
Sbjct: 157 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTG 216

Query: 361 TIKVWRASDG--VMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA 418
            I     S G       +E                 +V         Y            
Sbjct: 217 KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY------------ 264

Query: 419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR--IIA 476
                    + ++    +    + + +  K  + LA+     + I+ +  S D +  + A
Sbjct: 265 -----LLVDQRDEWRHKTASRFVVVLDA-KTGERLAKFEMGHE-IDSINVSQDEKPLLYA 317

Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD 513
            ++ DK++ + D   G+ + ++        ++  +  
Sbjct: 318 LSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM 354

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 76.0 bits (185), Expect = 2e-15
 Identities = 41/324 (12%), Positives = 81/324 (25%), Gaps = 41/324 (12%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLA----------SGSGDTTVRFWDVTTQTP---LFK 147
           R    + G    + +   + +G  +A           G     V  +D  T  P   +  
Sbjct: 39  RVIGMIDGGF--LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIEL 96

Query: 148 CEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHA 207
            +   +L        + T      L    +      V   +     R +           
Sbjct: 97  PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT 156

Query: 208 EAVISVKFSPNGRSLASGS-GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS 266
                     +G         + T          P       +  +   A+S  + +LV 
Sbjct: 157 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP-----EDEFLINHPAYSQKAGRLVW 211

Query: 267 GCKNGVIHAWDSSTGK-QIGQPMRGHKQWITALSWEPFH---------------LNHQCR 310
               G IH  D S+G  +    +    +   A  W P                 L  Q  
Sbjct: 212 PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRD 271

Query: 311 RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRW---GGSGLIYSASQDRTIKVWRA 367
            +        + + D    + +         +  I         L   ++ D+T+ +  A
Sbjct: 272 EWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 330

Query: 368 SDGVMCRTLEGHAHWVNTLALSTD 391
             G   R++    H    +  +  
Sbjct: 331 ESGEELRSVNQLGHGPQVITTADM 354

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.5 bits (85), Expect = 0.004
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)

Query: 93  VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL--ASGSGDTTVRFWDVTTQTPLFKCEG 150
           V  +   T    +       + S+  S + + L  A  +GD T+   D  +   L     
Sbjct: 282 VVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  105 bits (261), Expect = 1e-25
 Identities = 51/349 (14%), Positives = 90/349 (25%), Gaps = 43/349 (12%)

Query: 185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK 244
           + + A+F   P T       G     + +  +P G  +   +G + V    V + T    
Sbjct: 3   FSQTALFPSLPRTA-----RGT---AVVLGNTPAGDKIQYCNGTS-VYTVPVGSLTDTEI 53

Query: 245 CEGHKHWVLCIAWSPDSKQLVSGCKNG-VIHAWDSSTGKQIGQPMRGHKQWITALSWEPF 303
              H H       SP      SG  +G V     + T   +   +      +  +SW+  
Sbjct: 54  YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 113

Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK 363
                                    +  +        SV         +I  +  +    
Sbjct: 114 SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 173

Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423
                        E      +        L            Y+  +  ++        +
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233

Query: 424 AQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKS 483
                                              H   +  + +SPDG  IASAS DK+
Sbjct: 234 NVA--------------------------------HSGSVFGLTWSPDGTKIASASADKT 261

Query: 484 IKLWDGRIGKFITTLRGHVQAVYMV-AWSSDSRLLVSGSADSTLKVWNM 531
           IK+W+    K   T+    +            + LVS SA+  +   N 
Sbjct: 262 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 90.7 bits (223), Expect = 1e-20
 Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 18/275 (6%)

Query: 315 SGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMC 373
                ++    V       + T H+   T  +   SG    S      +++W  +     
Sbjct: 34  YCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI 93

Query: 374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLV 433
                         +S D   +  A    G +         +  +      Q      + 
Sbjct: 94  LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVD 153

Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLI---------NCVEFSPDGRIIASASFDKSI 484
                    +   +    ++      +            + V ++PDG + AS   D +I
Sbjct: 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI 213

Query: 485 KLWDGRIGKFITT-------LRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE 537
            L++G  G               H  +V+ + WS D   + S SAD T+K+WN+ T K+E
Sbjct: 214 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273

Query: 538 QDLPGH-GDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           + +P     E   +      + + S   +  +   
Sbjct: 274 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 77.2 bits (188), Expect = 4e-16
 Identities = 44/269 (16%), Positives = 78/269 (28%), Gaps = 13/269 (4%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
             T     H+      K SP+G   ASG     VR WD T  T + K     +   V + 
Sbjct: 49  TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 108

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
                   +  +           ++                +      +      S +  
Sbjct: 109 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168

Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
                    TV  ++            H  +V  + ++PD     S   +G I  ++   
Sbjct: 169 --------NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD 220

Query: 281 GKQIGQPMRGHKQWITALS-WEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
           G + G       + +           +    + AS+  D  I+IW+V   +  + +   T
Sbjct: 221 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT 280

Query: 340 R---SVTCIRWGGSGLIYSASQDRTIKVW 365
           R       I W    L+ S S +  I   
Sbjct: 281 RIEDQQLGIIWTKQALV-SISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.7 bits (145), Expect = 1e-10
 Identities = 12/92 (13%), Positives = 22/92 (23%), Gaps = 3/92 (3%)

Query: 465 CVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADS 524
            +  +P G  I   +   S+                H     +   S       SG    
Sbjct: 22  VLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80

Query: 525 TLKVWNMKTKKIEQDL--PGHGDEVYAVDWAP 554
            +++W+            P     V  + W  
Sbjct: 81  NVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 112

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 59.5 bits (142), Expect = 3e-10
 Identities = 43/267 (16%), Positives = 66/267 (24%), Gaps = 21/267 (7%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
             T     H+      K SP+G   ASG     VR WD T  T + K             
Sbjct: 49  TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI 108

Query: 258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGK 317
           S DS+             +        G           A++   F  +   R  + S  
Sbjct: 109 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168

Query: 318 DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE 377
           +                        +        L  S   D TI ++   DG      E
Sbjct: 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 228

Query: 378 GHAHWVNT-----------------LALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
             +                       + S D  +++   +T   +             L 
Sbjct: 229 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLG 288

Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPE 447
                    + LVS S +  +   NPE
Sbjct: 289 I----IWTKQALVSISANGFINFVNPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.8 bits (127), Expect = 2e-08
 Identities = 11/78 (14%), Positives = 26/78 (33%), Gaps = 4/78 (5%)

Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPD 555
            T RG      ++  +     +   +  +++    + +    +    H  +      +P 
Sbjct: 14  RTARGTA---VVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS 69

Query: 556 GEKVASGGKDKVLRLWQN 573
           G   ASG     +R+W  
Sbjct: 70  GYYCASGDVHGNVRIWDT 87

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  104 bits (259), Expect = 1e-25
 Identities = 39/292 (13%), Positives = 94/292 (32%), Gaps = 11/292 (3%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAW 257
               ++ GH + + ++  +P    L SGS D  +  W  ++       + H + ++ +  
Sbjct: 4   EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDN 54

Query: 258 SPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
           S   +   +S      ++           +    +    TA+      L           
Sbjct: 55  SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114

Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
           K   +      +S     +         I+      +  +   +T    + S   +  + 
Sbjct: 115 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 174

Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436
              A       +    L   E  ++            S K A      +  E + + +GS
Sbjct: 175 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS 234

Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
            D  +F+++ ++  K +  +  H+  +N + +     ++ S+  D  IK W+
Sbjct: 235 LDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.2 bits (206), Expect = 1e-18
 Identities = 43/286 (15%), Positives = 86/286 (30%), Gaps = 24/286 (8%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK------------- 147
               ++ GH + + ++  +P    L SGS D  +  W  ++                   
Sbjct: 4   EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQE 59

Query: 148 -CEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGH 206
               +                    + + N +    ++     +  ++  T         
Sbjct: 60  YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119

Query: 207 AEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS 266
                +V  S N  ++    G+T   F     +         +     I+ SP    + +
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179

Query: 267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFH-----LNHQCRRFASSGKDGAI 321
           G   G I  +D  + +            I A+SW+P          +    A+   D  I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239

Query: 322 RIWDV-ILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWR 366
            I+ V    + ++ L +H   V  + W     + S+  D  IK W 
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.9 bits (200), Expect = 7e-18
 Identities = 46/298 (15%), Positives = 89/298 (29%), Gaps = 32/298 (10%)

Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
           + + GH + ITAL+  P           S   DG I  W         +   H+  +  +
Sbjct: 7   KTISGHNKGITALTVNPL---------ISGSYDGRIMEWSS-----SSMHQDHSNLIVSL 52

Query: 346 RWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFK 405
               +    S S D T+KV   +        +  +   +           +    +    
Sbjct: 53  DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD 112

Query: 406 YDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINC 465
              +    S   A         +    V   +  T+ ++     + S    T  +   + 
Sbjct: 113 IIKSVRLNSPGSA-----VSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSY 167

Query: 466 VEFSPDGRIIASASFD-----------KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS 514
           +  SP    IA+               +            I  +              + 
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227

Query: 515 RLLVSGSADSTLKVWNMKT-KKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
            L+ +GS D+ + ++++K   KI + L  H D V  + W      + S G D  ++ W
Sbjct: 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRW 284

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 59.6 bits (142), Expect = 2e-10
 Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 6/95 (6%)

Query: 233 FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHK 292
                  + +                 +   + +G  +  I  +      +I + +  HK
Sbjct: 199 SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHK 258

Query: 293 QWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
             +  L WE            SSG D  I+ W+V+
Sbjct: 259 DGVNNLLWET------PSTLVSSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.7 bits (106), Expect = 8e-06
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 93  VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 139
           ++ V+   +   ++  H + V ++ +      L S   D  ++ W+V
Sbjct: 241 IYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.7 bits (106), Expect = 8e-06
 Identities = 8/47 (17%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 190 VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDV 236
           ++ V+   +   ++  H + V ++ +      L S   D  ++ W+V
Sbjct: 241 IYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  103 bits (256), Expect = 5e-25
 Identities = 38/288 (13%), Positives = 85/288 (29%), Gaps = 5/288 (1%)

Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWVLCIAWSPDSKQ 263
           GH +A+ ++  S +G++L S   +  +  WD++T        + H   +  I  +     
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69

Query: 264 LVSGCKNGVIHAWDSSTGKQIGQPMRGHKQ-WITALSWEPFHLNHQCRRFASSGKDGAIR 322
                 + +       +G    + +          L+            +         +
Sbjct: 70  FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129

Query: 323 IWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHW 382
           + +V +S     +            G    ++             +              
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189

Query: 383 VNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF 442
                ++TD   +V   S             +   A     +  P+  +L +GS D ++ 
Sbjct: 190 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249

Query: 443 LWNPE--KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD 488
           +WN     +   + +       +N V    +   I SA  D +IK W+
Sbjct: 250 VWNMNKPSDHPIIIKGAHAMSSVNSV-IWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  100 bits (249), Expect = 3e-24
 Identities = 51/292 (17%), Positives = 84/292 (28%), Gaps = 11/292 (3%)

Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL 305
            GH   +  ++ S D K L S    G I++WD STG         H   IT +       
Sbjct: 9   YGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD 68

Query: 306 -----NHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR 360
                     +   +G  G      V      + L     +   I         +     
Sbjct: 69  LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 128

Query: 361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA 420
            +     S    C  L     +V      +   +   + ++        +P E +     
Sbjct: 129 KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV--- 185

Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF 480
              +           S     +      E       T H   + CV +SPD   +A+ S 
Sbjct: 186 -AFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL 244

Query: 481 DKSIKLWDGRIGKF--ITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN 530
           D S+ +W+        I     H  +        +   +VS   DS +K WN
Sbjct: 245 DNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 78.9 bits (192), Expect = 1e-16
 Identities = 41/287 (14%), Positives = 78/287 (27%), Gaps = 28/287 (9%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFK--------------CEGTPY 153
           GH +A+ ++  S +G++L S   +  +  WD++T                          
Sbjct: 10  GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 69

Query: 154 LFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAV--- 210
                +  +    A    +D+                          +     A      
Sbjct: 70  FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 129

Query: 211 -ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
              V  S N   +A  +    V      ++  ++K  G     +     P     V+   
Sbjct: 130 LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSN 189

Query: 270 NGVIHAWDSSTGKQI-------GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR 322
           NG        + K I        +    +              +    R A+   D ++ 
Sbjct: 190 NGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249

Query: 323 IWDVILSQCVRVLTS---HTRSVTCIRWGGSGLIYSASQDRTIKVWR 366
           +W++       ++        SV  + W     I SA QD  IK W 
Sbjct: 250 VWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 68.9 bits (166), Expect = 2e-13
 Identities = 42/296 (14%), Positives = 83/296 (28%), Gaps = 53/296 (17%)

Query: 328 LSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL-EGHAHWVNT 385
           L    +V   H +++T +     G  ++SA  +  I  W  S G+  R   + HA  +  
Sbjct: 1   LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60

Query: 386 LALSTDYLMRVEAT-------STGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD- 437
           +  ++   +   +          GG   D +    +   +     A   +G+  V+    
Sbjct: 61  IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 120

Query: 438 ---------------------------------------DFTLFLWNPEKEKKSLARMTG 458
                                                       L      +        
Sbjct: 121 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180

Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
               +              +       + +        +   H   V  V+WS D+  L 
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240

Query: 519 SGSADSTLKVWNMKTKKIEQDL---PGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
           +GS D+++ VWNM        +         V +V W  +   + S G+D  ++ W
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFW 295

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 61.9 bits (148), Expect = 5e-11
 Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 491 IGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-GHGDEVYA 549
           +G       GH +A+  ++ S+D + L S  A+  +  W++ T    +  P  H   +  
Sbjct: 1   LGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60

Query: 550 VDWAPDGEKVASGGKDKVLRLWQN 573
           +     G+       D +  +   
Sbjct: 61  IKTTSKGDLFTVSWDDHLKVVPAG 84

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.9 bits (109), Expect = 3e-06
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 233 FWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR--G 290
             +            H   V C++WSPD+ +L +G  +  +  W+ +        ++   
Sbjct: 208 VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 267

Query: 291 HKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDV 326
               + ++ W             S+G+D  I+ W+V
Sbjct: 268 AMSSVNSVIW------LNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (100), Expect = 4e-05
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 140
                   HA + ++     N  ++ S   D+ ++FW+V 
Sbjct: 259 HPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (100), Expect = 4e-05
 Identities = 8/40 (20%), Positives = 17/40 (42%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVT 237
                   HA + ++     N  ++ S   D+ ++FW+V 
Sbjct: 259 HPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  100 bits (248), Expect = 7e-24
 Identities = 48/338 (14%), Positives = 96/338 (28%), Gaps = 48/338 (14%)

Query: 210 VISVKFSPNGRSLASGSGD-TTVRFWDVTTQT--PLFKCEGHKH-WVLCIAWSP--DSKQ 263
              + + P   ++A   G    VR  D       P+ +  GH    V  + +SP   S+ 
Sbjct: 20  TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79

Query: 264 LVSGCKNGVIHAWDSSTGKQI-------GQPMRGHKQWITALSWEPFHLNHQCRRFASSG 316
           L SG ++G +  W  +  K+            +     I+ +SW+              G
Sbjct: 80  LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE---G 136

Query: 317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL 376
           +D             +  ++ H++ +       S  + S +      V          + 
Sbjct: 137 RDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 196

Query: 377 EGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS 436
               H                              ++ S     ++     E    V   
Sbjct: 197 SDRTHH-----------------------------KQGSFVRDVEFSPDSGEFVITVGSD 227

Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT 496
              + F     +  K +       Q         D +  A+   D +I++WD    K + 
Sbjct: 228 RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 287

Query: 497 TLRGHVQAVYMVAWS---SDSRLLVSGSADSTLKVWNM 531
                 Q +         + +  ++S S D TL  + +
Sbjct: 288 KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.8 bits (192), Expect = 1e-16
 Identities = 43/264 (16%), Positives = 81/264 (30%), Gaps = 9/264 (3%)

Query: 109 HAEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTL 166
            +  V +VKFSP    + L SG     V  W  T        E      +         +
Sbjct: 62  GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121

Query: 167 A-DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG 225
           + D          E  D      +      +   +          +         ++   
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181

Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
                 +                  +V  + +SPDS + V    +    +       +  
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241

Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
           + +   ++ +    +         ++FA+ G D  IR+WDV  S+CV+  T   + +   
Sbjct: 242 KYIEDDQEPVQGGIFALSW--LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQ 299

Query: 346 RWG----GSGLIYSASQDRTIKVW 365
           + G    G+G I S S D T+  +
Sbjct: 300 QVGVVATGNGRIISLSLDGTLNFY 323

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 68.8 bits (166), Expect = 3e-13
 Identities = 35/344 (10%), Positives = 73/344 (21%), Gaps = 50/344 (14%)

Query: 113 VISVKFSPNGRSLASGSGD-TTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLA---- 167
              + + P   ++A   G    VR  D          +     F  + + +  T+     
Sbjct: 20  TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ-----FTGHGSSVVTTVKFSPI 74

Query: 168 -DVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS 226
                L + +    V +                 S     A  +  + +   GR L    
Sbjct: 75  KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134

Query: 227 G--DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI 284
              D    F    +   L +  GH   +                 +     +      + 
Sbjct: 135 EGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF 194

Query: 285 GQPMR---GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS 341
               R       ++  + + P          +              L             
Sbjct: 195 SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 254

Query: 342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST 401
           +  + W  S    +   D TI+VW  +     +        +    +             
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA--------- 305

Query: 402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWN 445
                                        +++S S D TL  + 
Sbjct: 306 -------------------------TGNGRIISLSLDGTLNFYE 324

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.9 bits (130), Expect = 9e-09
 Identities = 19/112 (16%), Positives = 34/112 (30%), Gaps = 14/112 (12%)

Query: 463 INCVEFSPDGRIIASASFDKS-IKLWDGRIGKF--ITTLRGHV-QAVYMVAWS--SDSRL 516
              + + P    IA      + ++  D    K   +    GH    V  V +S    S+ 
Sbjct: 20  TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79

Query: 517 LVSGSADSTLKVWNMKTKKIEQDL--------PGHGDEVYAVDWAPDGEKVA 560
           L SG     + VW     K    +              +  + W  +G ++ 
Sbjct: 80  LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.9 bits (104), Expect = 1e-05
 Identities = 36/290 (12%), Positives = 79/290 (27%), Gaps = 32/290 (11%)

Query: 289 RGHKQWITALSWEPFHLNHQCRRFAS-SGKDGAIRIWDVILS--QCVRVLTSH-TRSVTC 344
              + + T LS++P          A   GK   +R  D   S    V   T H +  VT 
Sbjct: 14  STQRNFTTHLSYDP-----TTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTT 68

Query: 345 IRW---GGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST 401
           +++    GS  + S  +   + VW  +      ++E +      +      +  +     
Sbjct: 69  VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL--AGPISDISWDFE 126

Query: 402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQ 461
           G          ++    ++                        + ++      + +   +
Sbjct: 127 GRRLCVVGEGRDNFGVFISWDSGNS------------LGEVSGHSQRINACHLKQSRPMR 174

Query: 462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS 521
            +   +               +      + G F+  +     +   V      R      
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR------ 228

Query: 522 ADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW 571
             S     + +  K  +D               D +K A+ G D  +R+W
Sbjct: 229 KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVW 278

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.1 bits (102), Expect = 3e-05
 Identities = 12/83 (14%), Positives = 27/83 (32%), Gaps = 9/83 (10%)

Query: 496 TTLRGHVQAVYMVAWSSDSRLLVSGSADST----LKVWNMKTKKIEQDLPGHGDEVYAVD 551
           +T R     +   ++   +  +      S     L   + K   + Q        V  V 
Sbjct: 14  STQRNFTTHL---SYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVK 70

Query: 552 WAP--DGEKVASGGKDKVLRLWQ 572
           ++P    + + SG +   + +W 
Sbjct: 71  FSPIKGSQYLCSGDESGKVIVWG 93

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 85.8 bits (211), Expect = 1e-18
 Identities = 28/376 (7%), Positives = 79/376 (21%), Gaps = 45/376 (11%)

Query: 200 TSSMPGHAEAVISVKFSPNGRSL-----ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLC 254
            S+      +          R       A  +G T            L    G    +  
Sbjct: 12  ASAAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL-- 69

Query: 255 IAWSPDSK----------QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSW-EPF 303
                             +   G +   +  +D  T   I           +        
Sbjct: 70  AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHII 129

Query: 304 HLNHQCRR-FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTI 362
                            A     V  +   ++  S +     I  G +   Y  S   ++
Sbjct: 130 GNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH--IHPGAAATHYLGSCPASL 187

Query: 363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY 422
                +                    + +   +    +  G                   
Sbjct: 188 AASDLAAAPAA-----AGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASS--------IL 234

Query: 423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK 482
           Q   P     +  + D        +  + +  +M    +  + +         +  +  +
Sbjct: 235 QGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAE 294

Query: 483 SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDL 540
           +       +G+    +  +      +  + D       + +    L +++  + + +  +
Sbjct: 295 NTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353

Query: 541 PGHGDEVYAVDWAPDG 556
                    +D  P+ 
Sbjct: 354 E--------LDKGPES 361

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 73.1 bits (178), Expect = 1e-14
 Identities = 22/323 (6%), Positives = 70/323 (21%), Gaps = 52/323 (16%)

Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHL---NHQCRRFASSGKDGAIRIWDVILS 329
                +  G  +G    G    +             +    R A   +   + ++D +  
Sbjct: 48  NWVSCAGCGVTLGH-SLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106

Query: 330 QCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALS 389
             +  +         +      +I + +    +  +                    L++ 
Sbjct: 107 LPIADIELPDAPRFSV-GPRVHIIGNCASSACLLFFLFGSSA-----------AAGLSVP 154

Query: 390 TDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKE 449
                ++  +++    +  A            +           S               
Sbjct: 155 GASDDQLTKSASCFHIHPGAAAT---------HYLGSCPASLAASDLAAAPAAAGI---- 201

Query: 450 KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVA 509
                            + +  G ++ + +                  + G+        
Sbjct: 202 -VGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADN 260

Query: 510 WSSDSRLLVSGSADS-------------------TLKVWNMKTKKIEQDLPGHGDEVYAV 550
           + S    +V+   ++                             +    +  +G +  A+
Sbjct: 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAI 319

Query: 551 DWAPDGEK--VASGGKDKVLRLW 571
             A DG     A+    +VL ++
Sbjct: 320 IAAQDGASDNYANSAGTEVLDIY 342

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 51.9 bits (123), Expect = 1e-07
 Identities = 15/164 (9%), Positives = 33/164 (20%), Gaps = 28/164 (17%)

Query: 434 SGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASA----------SFDKS 483
             +     ++        +L    G     +       G   A A               
Sbjct: 41  YFAGTTENWVSCAGC-GVTLGHSLGAFL--SLAVAGHSGSDFALASTSFARSAKGKRTDY 97

Query: 484 IKLWDGRIGKFITTLRGHVQ-------AVYMVAWSSDSR-LLVSGSADSTLKVWNMKTKK 535
           ++++D      I  +             V+++   + S  LL      S     ++    
Sbjct: 98  VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157

Query: 536 IEQDLPGHGD-------EVYAVDWAPDGEKVASGGKDKVLRLWQ 572
            +Q                     +      AS           
Sbjct: 158 DDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGI 201

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 51.9 bits (123), Expect = 1e-07
 Identities = 29/304 (9%), Positives = 71/304 (23%), Gaps = 45/304 (14%)

Query: 105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGT----------PYL 154
              G   A+ S  F+      A G     V  +D  T  P+   E             ++
Sbjct: 73  GHSGSDFALASTSFAR----SAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHI 128

Query: 155 FYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVK 214
                +               +    + +     +  Q+     C    PG A       
Sbjct: 129 IGNCASSACLLFFLFGS----SAAAGLSV--PGASDDQLTKSASCFHIHPGAAATHYL-- 180

Query: 215 FSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
            S      AS           V  Q                  +     + +   + +  
Sbjct: 181 GSCPASLAASDLAAAPAAAGIVGAQCT----GAQNCSSQAAQANYPGMLVWAVASSILQG 236

Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEP---------------FHLNHQCRRFASSGKDG 319
              ++        + G++    A ++                   L  +    +      
Sbjct: 237 DIPAAGATMK-AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE-HSRSCLAAAE 294

Query: 320 AIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE 377
                   + Q    ++    + ++   + G S    +++    + ++ A+      ++E
Sbjct: 295 NTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354

Query: 378 GHAH 381
               
Sbjct: 355 LDKG 358

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 81.9 bits (201), Expect = 3e-17
 Identities = 37/365 (10%), Positives = 88/365 (24%), Gaps = 34/365 (9%)

Query: 215 FSPNGRSLA--SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV 272
              +  +L   +      +   D  ++  +   +   + V     S   + L+   ++  
Sbjct: 26  NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDAR 84

Query: 273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV 332
           I   D    +              ++    F         A +       I D    +  
Sbjct: 85  IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 144

Query: 333 RVLTSHTRSV--TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALST 390
           +++++   +V               AS +    +    +        G    VN      
Sbjct: 145 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET-------GKVLLVNY---KD 194

Query: 391 DYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEK 450
              + V +     F  D            A   +                + +       
Sbjct: 195 IDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 254

Query: 451 KSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW 510
           +    +      +       DG I    +  K+   +     K +  L+G       +  
Sbjct: 255 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA---WKKVAELQGQGGGSLFIKT 311

Query: 511 SSDSRLLV-------SGSADSTLKVWNMKTKKIEQ---------DLPGHGDEVYAVDWAP 554
              S  L              ++ V+++K    +          DL      V   ++  
Sbjct: 312 HPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNK 371

Query: 555 DGEKV 559
            G++V
Sbjct: 372 RGDEV 376

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 66.9 bits (162), Expect = 2e-12
 Identities = 38/375 (10%), Positives = 86/375 (22%), Gaps = 49/375 (13%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF-----KCEGHKHWV 252
           +    +     AV   + S +GR L     D  +   D+  + P            +   
Sbjct: 53  KIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE 111

Query: 253 LCIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRR 311
                  + +               D  T +             T      +H   +   
Sbjct: 112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT----YHPEPRVAA 167

Query: 312 FASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV 371
             +S +     +      + + V      ++T    G +  +     D + + +  +   
Sbjct: 168 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANN 227

Query: 372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGF--KYDPANPEESSKHALAKYQAQCPEG 429
             +     +      AL                  KY P                  P+ 
Sbjct: 228 SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKN 287

Query: 430 EKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-------SASFDK 482
               +      L                G       ++  P    +         A   +
Sbjct: 288 HPQYAWKKVAEL---------------QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQ 332

Query: 483 SIKLWDGRIGKFITTLRGH---------VQAVYMVAWSSD-SRLLVS----GSADSTLKV 528
           S+ ++D +       +             + V    ++     +  S     +  S L V
Sbjct: 333 SVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVV 392

Query: 529 WNMKTKKIEQDLPGH 543
            + KT K++  +   
Sbjct: 393 VDDKTLKLKAVVKDP 407

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 56.5 bits (135), Expect = 4e-09
 Identities = 32/303 (10%), Positives = 73/303 (24%), Gaps = 22/303 (7%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL----FKCEGTPYLFY 156
           +    +     AV   + S +GR L     D  +   D+  + P      K         
Sbjct: 53  KIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVE 111

Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFS 216
            ++ +  +    +          ++D    +             +        V ++  S
Sbjct: 112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 171

Query: 217 PNGRSLASGSGDTTVRFWDVTTQTPLFKCE--GHKHWVLCIAWSPDSKQLVSGCKNGVIH 274
                      +T                   G   ++    W    +  ++   N    
Sbjct: 172 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKV 231

Query: 275 AWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS----- 329
           A   S  +++   +   K           H  +      S   DG+I +           
Sbjct: 232 AVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 291

Query: 330 --QCVRVLTSHTRSVTCIR--------WGGSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
             + V  L         I+        +  +     A   +++ V+   +      +   
Sbjct: 292 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 351

Query: 380 AHW 382
           A W
Sbjct: 352 AEW 354

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.4 bits (114), Expect = 2e-06
 Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDK 566
           +      +   V+      + + +  +KKI + +   G  V+    +  G  +   G+D 
Sbjct: 25  LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYAVHISRMSASGRYLLVIGRDA 83

Query: 567 VLRLW 571
            + + 
Sbjct: 84  RIDMI 88

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 76.8 bits (188), Expect = 1e-15
 Identities = 50/368 (13%), Positives = 99/368 (26%), Gaps = 31/368 (8%)

Query: 198 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF-----KCEGHKHWV 252
              + +     AV   + S +GR L     D  V   D+  + P            +   
Sbjct: 53  EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIE 111

Query: 253 LCIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIG-QPMRGHKQWITALSWEPFHL----N 306
                  + K               D  T +    Q  RG          EP       +
Sbjct: 112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 171

Query: 307 HQCRRFASSGKD-GAIRIWDVILSQCVRVLTSHT-RSVTCIRWGGSG-LIYSASQDRTIK 363
           H    F  + K+ G I + D      ++       R +      GS     +A+  R   
Sbjct: 172 HYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKL 231

Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKH---ALA 420
           V   +       +E             +++      + G         ++S         
Sbjct: 232 VVIDTKEGKLVAIEDTGGQTPHPGRGANFVH----PTFGPVWATSHMGDDSVALIGTDPE 287

Query: 421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQL-INCVEFSPDGRIIASAS 479
            +     +           +LF+      +      T + +  I+      D + +    
Sbjct: 288 GHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDG 347

Query: 480 FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-SRLLVS----GSADSTLKVWNMKTK 534
            D   K     I ++     G  + V    ++ D + +  S       +S L V + KT 
Sbjct: 348 SDPEFKTLP--IAEWAGITEGQPRVVQG-EFNKDGTEVWFSVWNGKDQESALVVVDDKTL 404

Query: 535 KIEQDLPG 542
           +++  +  
Sbjct: 405 ELKHVIKD 412

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 71.0 bits (173), Expect = 1e-13
 Identities = 41/426 (9%), Positives = 94/426 (22%), Gaps = 92/426 (21%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNET 160
              + +     AV   + S +GR L     D  V   D+  + P                
Sbjct: 53  EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT--------------- 96

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
                                                              S       +
Sbjct: 97  -----------------------------------TVAEIKIGSEARSIETSKMEGWEDK 121

Query: 221 SL-ASGSGDTTVRFWDVTTQTPLF-----------KCEGHKHWVLCIAWSPDSKQLVSGC 268
              A           D  T  P             +    +  V  I  S    + +   
Sbjct: 122 YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 181

Query: 269 KN-GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVI 327
           K  G I   D +    +       ++++     +  H     R F ++       +    
Sbjct: 182 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH-----RYFITAANARNKLVVIDT 236

Query: 328 LSQCVRVLTSHTRSVTCIRWG--------GSGLIYSASQDRTIKVWRASDGVMCRTLEGH 379
               +  +            G        G     S   D ++ +     G        +
Sbjct: 237 KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALI----GTDPEGHPDN 292

Query: 380 AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF 439
           A  +     +      +   +    +Y   +   + +  ++       + + +     D 
Sbjct: 293 AWKILDSFPALGG-GSLFIKTHPNSQYLYVDATLNPEAEISG-SVAVFDIKAMTGDGSDP 350

Query: 440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-----ASASFDKSIKLWDGRIGKF 494
                   +     A +T  Q  +   EF+ DG  +          + ++ + D +  + 
Sbjct: 351 EFKTLPIAE----WAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLEL 406

Query: 495 ITTLRG 500
              ++ 
Sbjct: 407 KHVIKD 412

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 67.9 bits (165), Expect = 1e-12
 Identities = 35/355 (9%), Positives = 83/355 (23%), Gaps = 32/355 (9%)

Query: 226 SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG 285
                +   D +T       +   + V     S   + L    ++G ++  D    +   
Sbjct: 39  RDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT 97

Query: 286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI 345
                      ++              A +       I D    +  ++ ++   +    
Sbjct: 98  VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQ 157

Query: 346 RWG-------------GSGLIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTD 391
            +                  I +  +   I +   +D    +T E     +++   L   
Sbjct: 158 EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 217

Query: 392 --YLMRVEATSTGGFKYDPANPEESSKHALAKY---QAQCPEGEKLVSGSDDFTLFLWNP 446
             Y +            D    +  +            +         G    T  + + 
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDD 277

Query: 447 EKEKKSLARMT--GHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA 504
                         +   I     +  G  +   +   S  L+         TL    + 
Sbjct: 278 SVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY------VDATLNPEAEI 331

Query: 505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV 559
              VA   D + +    +D   K   +        +      V   ++  DG +V
Sbjct: 332 SGSVA-VFDIKAMTGDGSDPEFKTLPIAE---WAGITEGQPRVVQGEFNKDGTEV 382

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 54.8 bits (131), Expect = 2e-08
 Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 15/128 (11%)

Query: 452 SLARMTGHQQLINCVEFSPDGRIIA---------SASFDKSIKLWDGRIGKFITTLRGHV 502
            +  M    ++    E  P  ++           +      I L DG   +  T L    
Sbjct: 3   GMKEMRESWKVHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG- 61

Query: 503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP-----GHGDEVYAVDWAPDGE 557
            AV++   S+  R L     D  + + ++  K+                  +     + +
Sbjct: 62  YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDK 121

Query: 558 KVASGGKD 565
              +G   
Sbjct: 122 YAIAGAYW 129

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 71.1 bits (172), Expect = 4e-14
 Identities = 30/284 (10%), Positives = 73/284 (25%), Gaps = 17/284 (5%)

Query: 224 SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSSTGK 282
           + S    +   DVT+           +  +    SPD  ++ V+   +  +   D++T  
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV 342
            I     G      A+S +   +       ++      + + D   +     + +    +
Sbjct: 66  VIATVPAGSSPQGVAVSPDGKQVYVTNMASST------LSVIDTTSNTVAGTVKTGKSPL 119

Query: 343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTG 402
                     +Y  +          +                 +A++ D      A    
Sbjct: 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179

Query: 403 GFKYD-------PANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR 455
                         +  +                  + +    F           K  AR
Sbjct: 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR 239

Query: 456 MTGHQQLINCVEFSPDG-RIIASASFDKSIKLWDGRIGKFITTL 498
           +         +  +PDG ++  + SF  ++ + D        T+
Sbjct: 240 IPVGPD-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 52.2 bits (123), Expect = 7e-08
 Identities = 23/285 (8%), Positives = 67/285 (23%), Gaps = 15/285 (5%)

Query: 265 VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIW 324
           ++  ++  I   D ++ K       G       +S +   +      + ++     + I 
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKV------YVANAHSNDVSII 59

Query: 325 DVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVN 384
           D   +  +  + + +             +Y  +   +      +                
Sbjct: 60  DTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL 119

Query: 385 TLA-------LSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD 437
            LA       L          +          N     +               + +   
Sbjct: 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDS 179

Query: 438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT 497
                +           ++      I          +     +  ++ + D    K    
Sbjct: 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR 239

Query: 498 LRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKKIEQDLP 541
           +         +A + D  ++ V+ S  +T+ V +  T  I   + 
Sbjct: 240 IPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 47.6 bits (111), Expect = 2e-06
 Identities = 27/284 (9%), Positives = 74/284 (26%), Gaps = 22/284 (7%)

Query: 101 RCTSSMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNE 159
           + T+++P  +   +    SP+G  +  + +    V   D  T   +           V  
Sbjct: 23  KVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV 81

Query: 160 TEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNG 219
           +               + ++V         +  +   +   +      ++ + +  SP+G
Sbjct: 82  SP--------------DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDG 127

Query: 220 RSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS 279
           + L   +          T    +            IA +PD  ++     + +  +    
Sbjct: 128 KKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVID- 186

Query: 280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHT 339
                   +   K               +            + + D   ++    +    
Sbjct: 187 --TVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP 244

Query: 340 RSVTCIRWG--GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAH 381
                I     G  +  + S   T+ V   +   +  T+    +
Sbjct: 245 D-PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKN 287

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 44.5 bits (103), Expect = 2e-05
 Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKV-ASGGKDKVLRLW 571
           ++ S    + V ++ + K+   +P  G        +PDG KV  +      + + 
Sbjct: 6   IANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSII 59

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 44.1 bits (102), Expect = 3e-05
 Identities = 10/77 (12%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 477 SASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD-SRLLVSGSADSTLKVWNMKTKK 535
           + S   +I + D    K   T+            S D +++ V+ +  + + + +  T  
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65

Query: 536 IEQDLPGHGDEVYAVDW 552
           +   +P           
Sbjct: 66  VIATVPAGSSPQGVAVS 82

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 51.8 bits (122), Expect = 9e-08
 Identities = 31/314 (9%), Positives = 74/314 (23%), Gaps = 25/314 (7%)

Query: 224 SGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWDSST 280
           +      +  W++  +  L   +       V  +  SPD + L V       + A+  + 
Sbjct: 9   ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68

Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
                          +AL     H++         G+   +  ++       R+      
Sbjct: 69  DDGALTFA-----AESALPGSLTHIS-----TDHQGQFVFVGSYNAGNVSVTRLEDGLPV 118

Query: 341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS 400
            V  +  G  G   +        +W  +       L   +   + +A     +  VE   
Sbjct: 119 GVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAG 178

Query: 401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQ 460
                +          +    Y          V    D    +   +         +  +
Sbjct: 179 PRHMVF--------HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 230

Query: 461 QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV---QAVYMVAWSSD-SRL 516
              +         + A       I ++       + +  G                   L
Sbjct: 231 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYL 290

Query: 517 LVSGSADSTLKVWN 530
           + +G     + V+ 
Sbjct: 291 IAAGQKSHHISVYE 304

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 8/128 (6%)

Query: 433 VSGSDDFTLFLWNPEKEKK-SLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGR 490
           ++  +   + +WN   E   +L ++      +  +  SPD R +      +  +  +   
Sbjct: 8   IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67

Query: 491 IGKFITTLRGHVQ---AVYMVAWSSDSRLLVSGSAD---STLKVWNMKTKKIEQDLPGHG 544
                 T         ++  ++     + +  GS +    ++            D+    
Sbjct: 68  PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127

Query: 545 DEVYAVDW 552
           D  ++ + 
Sbjct: 128 DGCHSANI 135

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 39.0 bits (89), Expect = 0.001
 Identities = 28/271 (10%), Positives = 57/271 (21%), Gaps = 12/271 (4%)

Query: 108 GHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCE------GTPYLFYVNET 160
                V  +  SP+ R L      +  V  + +                G+      +  
Sbjct: 34  DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ 93

Query: 161 EITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGR 220
                +      +   T     +      V +        +  P +    +         
Sbjct: 94  GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153

Query: 221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST 280
                     V        T       H  +     ++    +L S      +     + 
Sbjct: 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213

Query: 281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR 340
                  M       T  + +          +A       I ++ V     V        
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 273

Query: 341 SVTCIRW-----GGSGLIYSASQDRTIKVWR 366
           + T  R       G  LI +  +   I V+ 
Sbjct: 274 TETQPRGFNVDHSGKYLIAAGQKSHHISVYE 304

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (87), Expect = 0.002
 Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 6/94 (6%)

Query: 469 SPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHVQAVYMVAWSSDSRLL-VSGSADST 525
           S    +  ++   + I +W+      +T  +       V  +  S D R L V    +  
Sbjct: 1   SLKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFR 60

Query: 526 LKVWNMKTKKIEQDLPG---HGDEVYAVDWAPDG 556
           +  + +                  +  +     G
Sbjct: 61  VLAYRIAPDDGALTFAAESALPGSLTHISTDHQG 94

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 46.4 bits (110), Expect = 7e-06
 Identities = 29/177 (16%), Positives = 43/177 (24%), Gaps = 29/177 (16%)

Query: 93  VFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTP 152
           V   R  +  T  +P                 +A+G    TV    +     LF+ +   
Sbjct: 241 VVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIEL 300

Query: 153 YLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVIS 212
               V E E+      + PL T                                   V  
Sbjct: 301 RDTIVAEPEL-----GLGPLHTTFDGRGNAYTTL------------------FIDSQVCK 337

Query: 213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK 269
              +   +       +   +  DV  Q       GH H  L  +   D K LV   K
Sbjct: 338 WNIADAIKHYNGDRVNYIRQKLDVQYQP------GHNHASLTESRDADGKWLVVLSK 388

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 31/294 (10%), Positives = 71/294 (24%), Gaps = 56/294 (19%)

Query: 312 FASSGKDGAIRIWDV----------ILSQCVR---VLTSHTRSV----TCIRWG------ 348
           F S G  G +R+  V          + +        +T+ ++ +         G      
Sbjct: 14  FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPH 73

Query: 349 ---------GSGLIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEA 398
                    G  L  +   +  +   R       +     +   ++ L L          
Sbjct: 74  ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKV------- 126

Query: 399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTG 458
                  Y   N E                   + +  D  T+             ++  
Sbjct: 127 ---PKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETM---------DVAWQVIV 174

Query: 459 HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV 518
              L N  +    G+   S  ++    +      +             + A         
Sbjct: 175 DGNLDN-TDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKT 233

Query: 519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK-VASGGKDKVLRLW 571
            G       V      +  + +P      + ++ +PDG+  +A+G     + + 
Sbjct: 234 IGD-SKVPVVDGRGESEFTRYIPV-PKNPHGLNTSPDGKYFIANGKLSPTVSVI 285

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 45/392 (11%), Positives = 83/392 (21%), Gaps = 66/392 (16%)

Query: 205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL 264
                 I V F+ +      G  + +        Q      + H   +       D K L
Sbjct: 31  MRELMRIPV-FNVDSA-TGWGITNESKEILGGDQQYL--NGDCHHPHISMTDGRYDGKYL 86

Query: 265 -VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRI 323
            ++   N  +        K        + Q I  L         +      + +    + 
Sbjct: 87  FINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLR---LQKVPKTNYVFCNAEFVIPQP 143

Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
            D          T  T               +      + V    D          A + 
Sbjct: 144 NDGTDFSLDNSYTMFTAIDA----------ETMDVAWQVIVDGNLDNT-------DADYT 186

Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQC---PEGEKLVSGSDDFT 440
              A ST Y       S            +     +   +        G     G     
Sbjct: 187 GKYATSTCY------NSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVP 240

Query: 441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG 500
           +   +   E +    +   +              IA+     ++ +    I K       
Sbjct: 241 VV--DGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIA--IDKLDDLFED 296

Query: 501 HVQ-------------AVYMVAWSSDSRLLVSGSADSTLKVWNM----------KTKKIE 537
            ++                   +        +   DS +  WN+          +   I 
Sbjct: 297 KIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIR 356

Query: 538 QDL-----PGHGDEVYAVDWAPDGEKVASGGK 564
           Q L     PGH           DG+ +    K
Sbjct: 357 QKLDVQYQPGHNHASLTESRDADGKWLVVLSK 388

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 13/117 (11%), Positives = 27/117 (23%), Gaps = 12/117 (10%)

Query: 466 VEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADST 525
                 G         K   +      +F   +        +         + +G    T
Sbjct: 223 AAAVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPT 281

Query: 526 LKVWNM-KTKKIEQDLPGHGDEVYA----------VDWAPDGEKVASGGKDKVLRLW 571
           + V  + K   + +D     D + A            +   G    +   D  +  W
Sbjct: 282 VSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKW 338

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} Length = 441

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 48/401 (11%), Positives = 92/401 (22%), Gaps = 73/401 (18%)

Query: 108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC--------EGTP---YLFY 156
                 I V F+ +      G  + +        Q     C        +G     YLF 
Sbjct: 31  MRELMRIPV-FNVDSA-TGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFI 88

Query: 157 VNETEITKTLADVLPLDTLNTEEVVDIVYQK---QAVFQVRPVTRCTSSMPGHAEAVISV 213
            ++      +A  + LD + T+++  I   +       Q  P T               +
Sbjct: 89  NDK--ANTRVA-RIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEF-----VI 140

Query: 214 KFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVI 273
               +G   +  +  T     D  T    ++     + +         K   S C N   
Sbjct: 141 PQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGN-LDNTDADYTGKYATSTCYN--- 196

Query: 274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR 333
               S     +   MR  + W+   + E      +   F + G      +     S+  R
Sbjct: 197 ----SERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTR 252

Query: 334 VLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDY 392
            +                    +     T+ V                            
Sbjct: 253 YIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAID------------------------ 288

Query: 393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEK---- 448
             +++       +       E        +      G    +   D  +  WN       
Sbjct: 289 --KLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKH 346

Query: 449 ----------EKKSLARMTGHQQLINCVEFSPDGRIIASAS 479
                     +K  +    GH           DG+ +   S
Sbjct: 347 YNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 470

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 39.7 bits (91), Expect = 9e-04
 Identities = 43/416 (10%), Positives = 105/416 (25%), Gaps = 90/416 (21%)

Query: 201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTV---------RFWDVTTQTPLFKCEGHKHW 251
           S+      ++     SP+G+ +                    +D+  +  + + E   + 
Sbjct: 55  STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-ERIPNN 113

Query: 252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-------------GQPMRGHKQWITA- 297
              + WSP   +L     N  I+                       G     +++ + + 
Sbjct: 114 TQWVTWSPVGHKLAYVWNN-DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172

Query: 298 ----------------------------------LSWEPFHLNHQCRRFASSGKDGAIRI 323
                                                 P  +     +  +        +
Sbjct: 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFV 232

Query: 324 WDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWV 383
            +      V   TS   +       G   +   +       W   + +  + L    ++ 
Sbjct: 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVT-------WATQERISLQWLRRIQNYS 285

Query: 384 NTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCP-------EGEKLVSGS 436
                  D     E++          + E S+   + +++   P          K++S  
Sbjct: 286 VMDICDYD-----ESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE 340

Query: 437 DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDK--------SIKLWD 488
           + +    +    +K       G  ++I     + D     S  +           I+L D
Sbjct: 341 EGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSD 400

Query: 489 GRIGKFIT-TLRGHVQAVYMVAWSSDSRLLV---SGSADSTLKVWNMKTKKIEQDL 540
                 ++  L       Y V++S +++      SG       + +    K  + L
Sbjct: 401 YTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 279

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.9 bits (84), Expect = 0.004
 Identities = 28/252 (11%), Positives = 66/252 (26%), Gaps = 11/252 (4%)

Query: 246 EGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG--KQIGQPMRGHKQWITALSWEPF 303
           EG       +A +  +  +V+   N  I  +D       Q G+  +   Q +        
Sbjct: 19  EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV 78

Query: 304 HLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK 363
             +        S                    T               +I    +   + 
Sbjct: 79  RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVI 138

Query: 364 VWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQ 423
           ++  +  V+ +             +  D      + +            +  +    +  
Sbjct: 139 IFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGI 198

Query: 424 AQCP-------EGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII 475
              P        GE L++ + ++F L ++  + +  S             V    DG ++
Sbjct: 199 TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVV 258

Query: 476 ASASFDKSIKLW 487
             AS D  + ++
Sbjct: 259 L-ASKDYRLYIY 269

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	573
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.97
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.93
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.91
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.91
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.9
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.89
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.87
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.86
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.82
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.82
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.81
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.75
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.74
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.72
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.64
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.62
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.62
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.48
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.44
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.07
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.94
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.92
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.88
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.87
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.8
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.78
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.75
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.74
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.67
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.63
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.56
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.5
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.45
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.44
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.39
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.83
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.65
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.62
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.56
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.4
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.36
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.31
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.06
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.02
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	97.01
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.92
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	96.79
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	96.05
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	95.1
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	95.01
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	94.7
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	93.76
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.44
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	92.76
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	92.24
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	91.79
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	90.42
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	90.33
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	88.05
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	86.02
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	82.19
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	81.74

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-44  Score=347.81  Aligned_cols=308  Identities=28%  Similarity=0.524  Sum_probs=265.8

Q ss_pred             cccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEE
Q psy2671         103 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVD  182 (573)
Q Consensus       103 ~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (573)
                      ...|.||.++|++|+|+|++++|||||.||+|||||+.+++++                                     
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~-------------------------------------   52 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-------------------------------------   52 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------------------------------
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEE-------------------------------------
Confidence            3568899999999999999999999999999999999887543                                     


Q ss_pred             EEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCC
Q psy2671         183 IVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSK  262 (573)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~  262 (573)
                                        .++.+|.+.|.+++|+|++.++++++.++.+.+|+.........+.+|...+.++.|+|+++
T Consensus        53 ------------------~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (317)
T d1vyhc1          53 ------------------RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD  114 (317)
T ss_dssp             ------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS
T ss_pred             ------------------EEEeCCCCcEEEEeeecccccccccccccccccccccccccccccccccccceeeeccCCCc
Confidence                              23457999999999999999999999999999999999888888899999999999999999


Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      .+++++.|+.+++||+++++.. ..+.+|...+.++.|.|     ++.++++++.|+.|++|+....+....+..|...+
T Consensus       115 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i  188 (317)
T d1vyhc1         115 HIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMVRPNQ-----DGTLIASCSNDQTVRVWVVATKECKAELREHRHVV  188 (317)
T ss_dssp             EEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE
T ss_pred             eEEeeccCcceeEeecccceee-eEEccCCCcceeeeccc-----CCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCc
Confidence            9999999999999999988765 45678899999998876     56789999999999999999988888888888888


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      .++.+.+++....                                                                   
T Consensus       189 ~~~~~~~~~~~~~-------------------------------------------------------------------  201 (317)
T d1vyhc1         189 ECISWAPESSYSS-------------------------------------------------------------------  201 (317)
T ss_dssp             EEEEECCSCGGGG-------------------------------------------------------------------
T ss_pred             eEEEEeeccccce-------------------------------------------------------------------
Confidence            7777654320000                                                                   


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                    .    ..........+...+.++++++.|+.|++||.++++.+.++.+|.
T Consensus       202 ------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~  247 (317)
T d1vyhc1         202 ------------------------------I----SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD  247 (317)
T ss_dssp             ------------------------------G----GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             ------------------------------e----eccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCC
Confidence                                          0    000001112234567889999999999999999999999999999


Q ss_pred             ceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         503 QAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|.+.|++++|+|++++|+|||.||+|++|+
T Consensus       248 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         248 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             CCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-42  Score=332.89  Aligned_cols=284  Identities=20%  Similarity=0.360  Sum_probs=233.1

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      +|.+.|.|++|+|+|++||||+ ||+|+|||+.++......                                       
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~---------------------------------------   88 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV---------------------------------------   88 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS---------------------------------------
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccccee---------------------------------------
Confidence            6999999999999999999997 899999999865421100                                       


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC--eeeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ--TPLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~--~~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                                 ......+|.+.|.+++|+|+|++|++|+.|++|++||+...  +....+.+|...|.+++|+|++.+++
T Consensus        89 -----------~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  157 (337)
T d1gxra_          89 -----------SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF  157 (337)
T ss_dssp             -----------EEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred             -----------EEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence                       00124579999999999999999999999999999998754  44566789999999999999999999


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEE
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCI  345 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~  345 (573)
                      +++.|+.|++|++.+++.. ....+|...|.+++|.+     ++..+++++.|+.+++||+.+++.+..+ .|...|.++
T Consensus       158 s~~~d~~i~~~~~~~~~~~-~~~~~~~~~v~~l~~s~-----~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l  230 (337)
T d1gxra_         158 SCCSDGNIAVWDLHNQTLV-RQFQGHTDGASCIDISN-----DGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSL  230 (337)
T ss_dssp             EEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEE
T ss_pred             ccccccccccccccccccc-ccccccccccccccccc-----cccccccccccccccccccccceeeccc-ccccceEEE
Confidence            9999999999999988754 45668899999999866     5678999999999999999888776654 356667777


Q ss_pred             EECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheee
Q psy2671         346 RWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQA  424 (573)
Q Consensus       346 ~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  424 (573)
                      +|++++ .+++++.|+.+++|++                                                         
T Consensus       231 ~~~~~~~~l~~~~~d~~i~i~d~---------------------------------------------------------  253 (337)
T d1gxra_         231 GYCPTGEWLAVGMESSNVEVLHV---------------------------------------------------------  253 (337)
T ss_dssp             EECTTSSEEEEEETTSCEEEEET---------------------------------------------------------
T ss_pred             EEcccccccceeccccccccccc---------------------------------------------------------
Confidence            766544 4455555555555554                                                         


Q ss_pred             eCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce
Q psy2671         425 QCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA  504 (573)
Q Consensus       425 ~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~  504 (573)
                                            ....  ......|...|++++|+|+|++|++|+.||.|++||..+++.+..+. |...
T Consensus       254 ----------------------~~~~--~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~  308 (337)
T d1gxra_         254 ----------------------NKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSS  308 (337)
T ss_dssp             ----------------------TSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSC
T ss_pred             ----------------------cccc--cccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCC
Confidence                                  3322  12344677889999999999999999999999999999999887765 6789


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      |++++|+|++++||+|+.|++|+|||+
T Consensus       309 v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         309 VLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999999999996

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-41  Score=330.49  Aligned_cols=279  Identities=20%  Similarity=0.368  Sum_probs=239.5

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe-----eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT-----PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~-----~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      +|...|.|++|+|+|++||+|+ |+.|+|||+.+..     ......+|.+.|.+++|+|||++|++|+.||.|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            6999999999999999999987 8999999997643     223456899999999999999999999999999999987


Q ss_pred             CCce-ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEe
Q psy2671         280 TGKQ-IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSAS  357 (573)
Q Consensus       280 ~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s  357 (573)
                      .... ....+.+|...+..+.|.|     ++..+++++.|+.|++|++.++++......|...|.+++|++++ .+++++
T Consensus       128 ~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~  202 (337)
T d1gxra_         128 APTPRIKAELTSSAPACYALAISP-----DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG  202 (337)
T ss_dssp             CC--EEEEEEECSSSCEEEEEECT-----TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             cccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5432 3345678888999998876     56789999999999999999999999999999999999998765 677777


Q ss_pred             CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         358 QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       358 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      .|+.+++||++++..+.                                                               
T Consensus       203 ~d~~v~i~d~~~~~~~~---------------------------------------------------------------  219 (337)
T d1gxra_         203 LDNTVRSWDLREGRQLQ---------------------------------------------------------------  219 (337)
T ss_dssp             TTSEEEEEETTTTEEEE---------------------------------------------------------------
T ss_pred             ccccccccccccceeec---------------------------------------------------------------
Confidence            77888877776543221                                                               


Q ss_pred             CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE
Q psy2671         438 DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL  517 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l  517 (573)
                                        ...|...|.+++|+|++++|++|+.||.+++||.++++.. ....|...|++++|+|++++|
T Consensus       220 ------------------~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l  280 (337)
T d1gxra_         220 ------------------QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWF  280 (337)
T ss_dssp             ------------------EEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEE
T ss_pred             ------------------ccccccceEEEEEcccccccceeccccccccccccccccc-cccccccccceEEECCCCCEE
Confidence                              1124567899999999999999999999999999988764 456789999999999999999


Q ss_pred             EEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         518 VSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       518 as~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++.|+.|++||+.+++.+..+. |.+.|++++|+|++++|++||.|++|++|+
T Consensus       281 ~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWd  334 (337)
T d1gxra_         281 VSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYE  334 (337)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             EEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            999999999999999998877654 778999999999999999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-41  Score=337.64  Aligned_cols=313  Identities=27%  Similarity=0.455  Sum_probs=244.6

Q ss_pred             CccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEec
Q psy2671         108 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQK  187 (573)
Q Consensus       108 gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (573)
                      +|.+.|+||+|||||++||||+ |++|+|||+.+++++.+.........                               
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~-------------------------------  107 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK-------------------------------  107 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------------------------------
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccc-------------------------------
Confidence            6999999999999999999987 89999999999887654332110000                               


Q ss_pred             eeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE
Q psy2671         188 QAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG  267 (573)
Q Consensus       188 ~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg  267 (573)
                            ...........+|...|.+++|+|+|++|++|+.|++|++||...++.+....+|...|.+++|++++..++++
T Consensus       108 ------~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~  181 (388)
T d1erja_         108 ------DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSG  181 (388)
T ss_dssp             -----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             ------cccccccccccCCCCCEEEEEECCCCCcceeccccccccccccccccccccccccccccccccccccccccccc
Confidence                  00000112345789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe-------cCCCc
Q psy2671         268 CKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL-------TSHTR  340 (573)
Q Consensus       268 s~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~h~~  340 (573)
                      +.++.+++||..+...... .. +......+.+.+    .++++|++++.||.|++|+..++.....+       .+|..
T Consensus       182 ~~~~~i~~~d~~~~~~~~~-~~-~~~~~~~~~~~~----~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~  255 (388)
T d1erja_         182 SGDRTVRIWDLRTGQCSLT-LS-IEDGVTTVAVSP----GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD  255 (388)
T ss_dssp             ETTSEEEEEETTTTEEEEE-EE-CSSCEEEEEECS----TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS
T ss_pred             ccceeeeeeeccccccccc-cc-cccccccccccC----CCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCC
Confidence            9999999999988765432 22 333344455443    35678999999999999999987766543       46888


Q ss_pred             cEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhh
Q psy2671         341 SVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHAL  419 (573)
Q Consensus       341 ~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  419 (573)
                      .|.+++|++++ .+++++.|+.|++||+.++.........                                        
T Consensus       256 ~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----------------------------------------  295 (388)
T d1erja_         256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP----------------------------------------  295 (388)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEEC----------------------------------------------------
T ss_pred             CEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccc----------------------------------------
Confidence            99999999876 7899999999999998765332111000                                        


Q ss_pred             hheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         420 AKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       420 ~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                                                  ...........|...|.+++|+|++++|++|+.||.|++||.++++.+.+++
T Consensus       296 ----------------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~  347 (388)
T d1erja_         296 ----------------------------NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ  347 (388)
T ss_dssp             -------------------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             ----------------------------cccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEe
Confidence                                        0011223345678889999999999999999999999999999999999999


Q ss_pred             CCcceEEEEEE------CCCCCEEEEEeCCCcEEEEeCC
Q psy2671         500 GHVQAVYMVAW------SSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       500 ~h~~~v~~v~~------s~dg~~las~s~D~~v~vwd~~  532 (573)
                      +|...|+++++      +|++++||||+.||+|+||+++
T Consensus       348 ~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             CCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CCCCCEEEEEEecCcccCCCCCEEEEEeCCCEEEEEeee
Confidence            99999999875      5789999999999999999984

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-41  Score=337.28  Aligned_cols=288  Identities=30%  Similarity=0.519  Sum_probs=237.9

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec------------------CCCCcEEEEEEcCCCCeEEE
Q psy2671         205 GHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE------------------GHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~------------------~h~~~V~~v~~s~dg~~l~s  266 (573)
                      +|.+.|+|++|||||++||+|+ |++|+|||+.+++.+..+.                  +|...|++++|+|+|++|++
T Consensus        60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            6999999999999999999986 8999999999887665543                  46677999999999999999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      |+.||.|++||...++.+ ....+|...|.++.|.+     ++..+++++.++.+++||............+...+....
T Consensus       139 ~~~dg~v~i~~~~~~~~~-~~~~~h~~~v~~~~~~~-----~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  212 (388)
T d1erja_         139 GAEDRLIRIWDIENRKIV-MILQGHEQDIYSLDYFP-----SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAV  212 (388)
T ss_dssp             EETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred             cccccccccccccccccc-ccccccccccccccccc-----ccccccccccceeeeeeeccccccccccccccccccccc
Confidence            999999999999988765 34678999999999875     457899999999999999998888777766665555544


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      +..++ .+++++.|+.|++|+..++.....+..                                               
T Consensus       213 ~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-----------------------------------------------  245 (388)
T d1erja_         213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS-----------------------------------------------  245 (388)
T ss_dssp             CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------------------------------------
T ss_pred             cCCCCCeEEEEcCCCeEEEeecccCccceeecc-----------------------------------------------
Confidence            44444 677888888888888776544322210                                               


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe------------
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK------------  493 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~------------  493 (573)
                                                ......+|...|.+++|+|++++|++|+.||.|++||.++++            
T Consensus       246 --------------------------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~  299 (388)
T d1erja_         246 --------------------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT  299 (388)
T ss_dssp             -------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred             --------------------------ccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccc
Confidence                                      011234678889999999999999999999999999987653            


Q ss_pred             EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEE------ccCCCEEEEeeCCCc
Q psy2671         494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW------APDGEKVASGGKDKV  567 (573)
Q Consensus       494 ~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~------s~d~~~l~s~~~d~~  567 (573)
                      .......|...|.+++|+|++++|++|+.||.|++||+++++.+..+.+|.+.|+++++      +|++++|+|||.||+
T Consensus       300 ~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~  379 (388)
T d1erja_         300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK  379 (388)
T ss_dssp             EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred             eeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCE
Confidence            23445678889999999999999999999999999999999999999999999999975      578999999999999


Q ss_pred             EEEcc
Q psy2671         568 LRLWQ  572 (573)
Q Consensus       568 i~iw~  572 (573)
                      |++|+
T Consensus       380 I~iW~  384 (388)
T d1erja_         380 ARIWK  384 (388)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            99997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.7e-40  Score=321.72  Aligned_cols=290  Identities=26%  Similarity=0.451  Sum_probs=240.8

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.++|++++|+|++++||||+.||+|+|||+.+++.+..+.+|...|.+++|+|++.++++|+.|+.+++|+...
T Consensus        49 ~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~  128 (340)
T d1tbga_          49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT  128 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSS
T ss_pred             EEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccc
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999764


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCC
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDR  360 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~  360 (573)
                      ......                                            ....+.+|..............+.....|.
T Consensus       129 ~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (340)
T d1tbga_         129 REGNVR--------------------------------------------VSRELAGHTGYLSCCRFLDDNQIVTSSGDT  164 (340)
T ss_dssp             SCSCCC--------------------------------------------EEEEECCCSSCEEEEEEEETTEEEEEETTT
T ss_pred             cccccc--------------------------------------------cceecccccccccccccccccccccccccc
Confidence            422110                                            112233444444444444555667777888


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      ....+.............+...+....                                     ..+.+.++++|+.|+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~d~~  207 (340)
T d1tbga_         165 TCALWDIETGQQTTTFTGHTGDVMSLS-------------------------------------LAPDTRLFVSGACDAS  207 (340)
T ss_dssp             EEEEEETTTTEEEEEEECCSSCEEEEE-------------------------------------ECTTSSEEEEEETTTE
T ss_pred             cccccccccccccccccccceeEeeec-------------------------------------cccccceeEEeecCce
Confidence            888877766554444333333332222                                     2255778999999999


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee--cCCcceEEEEEECCCCCEEE
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL--RGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~--~~h~~~v~~v~~s~dg~~la  518 (573)
                      +++||+++.. ....+.+|...|++++|+|++++|++|+.||.|++||.+..+.+..+  ..|...|.+++|+|++++|+
T Consensus       208 v~i~d~~~~~-~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  286 (340)
T d1tbga_         208 AKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLL  286 (340)
T ss_dssp             EEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEE
T ss_pred             EEEEECCCCc-EEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEE
Confidence            9999987754 46677899999999999999999999999999999999998877665  45667899999999999999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+.||.|++||+.+++.+..+.+|.++|++++|+|++++|+|||.||+|++|+
T Consensus       287 ~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         287 AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            999999999999999999999999999999999999999999999999999996

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.9e-40  Score=318.80  Aligned_cols=287  Identities=25%  Similarity=0.330  Sum_probs=239.0

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      +.+.+.+++++|+|+.||.++ ++.|.+||+.++...                                           
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~-------------------------------------------   51 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDT-------------------------------------------   51 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCC-------------------------------------------
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCcee-------------------------------------------
Confidence            444566889999999999986 567999999876432                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee--EEecCCCCcEEEEEEcCCCCeEEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~s~dg~~l~s  266 (573)
                                  ..+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++...  ..+.+|...|.+++|+|++++|++
T Consensus        52 ------------~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~  119 (311)
T d1nr0a1          52 ------------EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAA  119 (311)
T ss_dssp             ------------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEE
T ss_pred             ------------EEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccccccccccccccCcccccccccccccccc
Confidence                        234589999999999999999999999999999999887643  457889999999999999999999


Q ss_pred             Eee--CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEE
Q psy2671         267 GCK--NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVT  343 (573)
Q Consensus       267 gs~--dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~  343 (573)
                      ++.  +..+++|+.++++.. ..+.+|...|.+++|.|.     ++ .+++++.||.|++||+.+.+....+..|...|.
T Consensus       120 ~~~~~~~~~~v~~~~~~~~~-~~l~~h~~~v~~v~~~~~-----~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~  193 (311)
T d1nr0a1         120 VGEGRERFGHVFLFDTGTSN-GNLTGQARAMNSVDFKPS-----RPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVH  193 (311)
T ss_dssp             EECCSSCSEEEEETTTCCBC-BCCCCCSSCEEEEEECSS-----SSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEE
T ss_pred             cccccccccccccccccccc-cccccccccccccccccc-----ceeeeccccccccccccccccccccccccccccccc
Confidence            886  456999999988765 457899999999999773     33 588999999999999999999999999999999


Q ss_pred             EEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         344 CIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       344 ~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ++.|++++ .+++++.|+.+++|+..++.....++..                                           
T Consensus       194 ~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-------------------------------------------  230 (311)
T d1nr0a1         194 SVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDD-------------------------------------------  230 (311)
T ss_dssp             EEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCT-------------------------------------------
T ss_pred             ccccCcccccccccccccccccccccccccccccccc-------------------------------------------
Confidence            99999876 6888999999999998776543322110                                           


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCc
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHV  502 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~  502 (573)
                                                    .....+|...|++++|+|++++|++|+.||+|+|||.++++++.++..|.
T Consensus       231 ------------------------------~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~  280 (311)
T d1nr0a1         231 ------------------------------SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT  280 (311)
T ss_dssp             ------------------------------TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred             ------------------------------ccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCC
Confidence                                          11234688899999999999999999999999999999999999887664


Q ss_pred             c---eEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         503 Q---AVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       503 ~---~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .   .+.++.|+  +.+|++++.||.|++||++
T Consensus       281 ~~~~~~~~~~~~--~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         281 RIEDQQLGIIWT--KQALVSISANGFINFVNPE  311 (311)
T ss_dssp             SGGGCEEEEEEC--SSCEEEEETTCCEEEEETT
T ss_pred             CccceEEEEEec--CCEEEEEECCCEEEEEeCC
Confidence            3   45555554  5689999999999999974

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.2e-39  Score=313.19  Aligned_cols=289  Identities=25%  Similarity=0.427  Sum_probs=239.3

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +.++|.||.++|++|+|+|++++|||||.||+|+|||+.+++++.                                   
T Consensus        47 ~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~-----------------------------------   91 (340)
T d1tbga_          47 TRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH-----------------------------------   91 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE-----------------------------------
T ss_pred             eeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEE-----------------------------------
Confidence            345789999999999999999999999999999999998875432                                   


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCC----eeeEEecCCCCcEEEEEE
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQ----TPLFKCEGHKHWVLCIAW  257 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~----~~~~~~~~h~~~V~~v~~  257 (573)
                                          .+.+|..+|.+++|+|+++++++|+.|+.+++|+....    .....+.+|.....+...
T Consensus        92 --------------------~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (340)
T d1tbga_          92 --------------------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF  151 (340)
T ss_dssp             --------------------EEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEE
T ss_pred             --------------------EEecccccEEeeEeeccceeeeeecccceeecccccccccccccceeccccccccccccc
Confidence                                23478999999999999999999999999999997654    344567788877776665


Q ss_pred             cCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecC
Q psy2671         258 SPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTS  337 (573)
Q Consensus       258 s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  337 (573)
                      .. +..+.....+.....|........ .....+...+....+.+     ....+++++.|+.|++||+..++++..+.+
T Consensus       152 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~  224 (340)
T d1tbga_         152 LD-DNQIVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAP-----DTRLFVSGACDASAKLWDVREGMCRQTFTG  224 (340)
T ss_dssp             EE-TTEEEEEETTTEEEEEETTTTEEE-EEEECCSSCEEEEEECT-----TSSEEEEEETTTEEEEEETTTTEEEEEECC
T ss_pred             cc-cccccccccccccccccccccccc-ccccccceeEeeecccc-----ccceeEEeecCceEEEEECCCCcEEEEEeC
Confidence            54 456888889999999988765443 22334555566665544     456899999999999999999999999999


Q ss_pred             CCccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhh
Q psy2671         338 HTRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSK  416 (573)
Q Consensus       338 h~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (573)
                      |...|.+++|++++ .+++|+.|+.|++|+++.......+                                        
T Consensus       225 h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~----------------------------------------  264 (340)
T d1tbga_         225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY----------------------------------------  264 (340)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE----------------------------------------
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccc----------------------------------------
Confidence            99999999998776 6788888888888887654322111                                        


Q ss_pred             hhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEE
Q psy2671         417 HALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFIT  496 (573)
Q Consensus       417 ~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~  496 (573)
                                                            ....+...|.+++|+|++++|++|+.||.|++||..+++.+.
T Consensus       265 --------------------------------------~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~  306 (340)
T d1tbga_         265 --------------------------------------SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAG  306 (340)
T ss_dssp             --------------------------------------CCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred             --------------------------------------ccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEE
Confidence                                                  112344568999999999999999999999999999999999


Q ss_pred             eecCCcceEEEEEECCCCCEEEEEeCCCcEEEEe
Q psy2671         497 TLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       497 ~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd  530 (573)
                      ++.+|...|++++|+||+++|||||.||+|+|||
T Consensus       307 ~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             EEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence            9999999999999999999999999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.5e-40  Score=320.47  Aligned_cols=339  Identities=24%  Similarity=0.411  Sum_probs=252.7

Q ss_pred             cCCCccccE-EEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         105 SMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       105 ~~~gH~~~V-~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +|.||.+.| +|++|  ++++||||+.|++|+|||+.+++++.                                     
T Consensus         7 tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~-------------------------------------   47 (355)
T d1nexb2           7 TLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLL-------------------------------------   47 (355)
T ss_dssp             EEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEE-------------------------------------
T ss_pred             EECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEE-------------------------------------
Confidence            588999986 56655  68999999999999999998876542                                     


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCC--CcEEEEEEcCCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHK--HWVLCIAWSPDS  261 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~--~~V~~v~~s~dg  261 (573)
                                        ++.+|.++|++++|+|++ +|++|+.|++|++|++...........+.  .......+++++
T Consensus        48 ------------------~l~~H~~~V~~l~~s~~~-~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (355)
T d1nexb2          48 ------------------QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI  108 (355)
T ss_dssp             ------------------EEECCSSCEEEEEEETTT-EEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTE
T ss_pred             ------------------EEECCCCCEEEEEEcCCC-EEEEEeccccccccccccccccccccccccccccccccccccc
Confidence                              345899999999999964 89999999999999999887766554433  345566788999


Q ss_pred             CeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         262 KQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       262 ~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      .++++++.|+.|++||+.++.........+....  ....+                       ............|...
T Consensus       109 ~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~--~~~~~-----------------------~~~~~~~~~~~~~~~~  163 (355)
T d1nexb2         109 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL--VFHTP-----------------------EENPYFVGVLRGHMAS  163 (355)
T ss_dssp             EEEEEEETTSEEEEEECCC-----------CCCE--EESCT-----------------------TTCTTEEEEEECCSSC
T ss_pred             ceeeeecCCCcEEEEEccCCceeccccccceecc--ceecc-----------------------ccccceeeeeeecccc
Confidence            9999999999999999987654322111111000  00000                       0011122233345555


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      +.+.... ...++++..|+.+++|+++++.......++...+..+.++                                
T Consensus       164 v~~~~~~-~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--------------------------------  210 (355)
T d1nexb2         164 VRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYD--------------------------------  210 (355)
T ss_dssp             EEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--------------------------------
T ss_pred             ccccccc-cceeeeecccceeeeeecccccceeeeecccccccccccc--------------------------------
Confidence            5554443 2478899999999999999998888777776666555544                                


Q ss_pred             eeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         422 YQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                           +.+..+++++.|+++++||.++.. .+..+.+|...|.++++++  ++|++|+.||.|++||.+++...  +..|
T Consensus       211 -----~~~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~--~~~~  280 (355)
T d1nexb2         211 -----HERKRCISASMDTTIRIWDLENGE-LMYTLQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRK--FSYH  280 (355)
T ss_dssp             -----TTTTEEEEEETTSCEEEEETTTCC-EEEEECCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEE--EEEE
T ss_pred             -----ccceeeecccccceEEeeeccccc-ccccccccccccccccccc--ceeeeeeccccccccccccccee--cccc
Confidence                 557899999999999999988654 4667889999999999975  69999999999999999887644  3445


Q ss_pred             cceEEEE-EECCCCCEEEEEeCCCcEEEEeCCcccccc-cccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         502 VQAVYMV-AWSSDSRLLVSGSADSTLKVWNMKTKKIEQ-DLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       502 ~~~v~~v-~~s~dg~~las~s~D~~v~vwd~~~~~~~~-~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      ...+.++ .+++++++|++| .|++|++||++++++++ .+.+|.++|++++|+|+ ..+++++.||+++||
T Consensus       281 ~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~  350 (355)
T d1nexb2         281 HTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLE  350 (355)
T ss_dssp             CTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEE
T ss_pred             cCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEE
Confidence            5555554 567778777666 48999999999999875 57889999999999987 578889999997776

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.1e-39  Score=313.48  Aligned_cols=279  Identities=22%  Similarity=0.361  Sum_probs=236.1

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCcee-
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQI-  284 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~-  284 (573)
                      +.+.+.+++++|+|+.||.++ ++.|.+||+.+......+.+|...|++++|+|+|++|++|+.||+|++||+.++... 
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~   94 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL   94 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc
Confidence            445566889999999999986 557999999999888888999999999999999999999999999999999887643 


Q ss_pred             cccccCCcccEEEEEecccccCCCCCEEEEEeC--CCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCC
Q psy2671         285 GQPMRGHKQWITALSWEPFHLNHQCRRFASSGK--DGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDR  360 (573)
Q Consensus       285 ~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~  360 (573)
                      ...+.+|...|.+++|.|     +++++++++.  +..+++|++.+++....+.+|...|.+++|++++  .+++|+.|+
T Consensus        95 ~~~~~~~~~~v~~v~~s~-----d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~  169 (311)
T d1nr0a1          95 KTTIPVFSGPVKDISWDS-----ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN  169 (311)
T ss_dssp             EEEEECSSSCEEEEEECT-----TSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred             ccccccccCccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence            234678999999999976     5678888875  4669999999999989999999999999998765  466777777


Q ss_pred             eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCe
Q psy2671         361 TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFT  440 (573)
Q Consensus       361 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~  440 (573)
                      .|++||++++..                                                                    
T Consensus       170 ~i~i~d~~~~~~--------------------------------------------------------------------  181 (311)
T d1nr0a1         170 TVAIFEGPPFKF--------------------------------------------------------------------  181 (311)
T ss_dssp             CEEEEETTTBEE--------------------------------------------------------------------
T ss_pred             cccccccccccc--------------------------------------------------------------------
Confidence            777777664432                                                                    


Q ss_pred             EEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee-------cCCcceEEEEEECCC
Q psy2671         441 LFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL-------RGHVQAVYMVAWSSD  513 (573)
Q Consensus       441 i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~-------~~h~~~v~~v~~s~d  513 (573)
                                  .....+|...|+++.|+|+++++++++.||.|++||.++++.+..+       .+|...|++++|+|+
T Consensus       182 ------------~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~  249 (311)
T d1nr0a1         182 ------------KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD  249 (311)
T ss_dssp             ------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT
T ss_pred             ------------ccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccCCC
Confidence                        2233456778999999999999999999999999999988776655       368889999999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCcccccccccCcCC---CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         514 SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD---EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       514 g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~---~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +++|++|+.|++|+|||++++++++.+..|..   .+.++.|+  ++.|++++.||.|++|+
T Consensus       250 ~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~--~~~l~s~s~dG~i~~wd  309 (311)
T d1nr0a1         250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT--KQALVSISANGFINFVN  309 (311)
T ss_dssp             SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC--SSCEEEEETTCCEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEec--CCEEEEEECCCEEEEEe
Confidence            99999999999999999999999888876643   45555554  56799999999999997

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4e-40  Score=325.45  Aligned_cols=303  Identities=16%  Similarity=0.278  Sum_probs=229.7

Q ss_pred             ccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         109 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       109 H~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      +.++|+|++|+|||++||+|+.|+.|+|||..+++..                                           
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~-------------------------------------------   42 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV-------------------------------------------   42 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE-------------------------------------------
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEE-------------------------------------------
Confidence            4578999999999999999999999999998765421                                           


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEE
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVS  266 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~s  266 (573)
                                +...+.||.++|.+++|+|++++|++|+.|++|+|||+.++.  +...+.+|...|.+++|+|++++|++
T Consensus        43 ----------~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~  112 (371)
T d1k8kc_          43 ----------QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAV  112 (371)
T ss_dssp             ----------EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEE
T ss_pred             ----------EEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccccccccccccccccccccccccee
Confidence                      112356899999999999999999999999999999998765  34556789999999999999999999


Q ss_pred             EeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEE
Q psy2671         267 GCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIR  346 (573)
Q Consensus       267 gs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~  346 (573)
                      |+.|+++++|+.+.......                                            .......|...|.+++
T Consensus       113 ~s~d~~i~i~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~v~~v~  148 (371)
T d1k8kc_         113 GSGSRVISICYFEQENDWWV--------------------------------------------CKHIKKPIRSTVLSLD  148 (371)
T ss_dssp             EETTSSEEEEEEETTTTEEE--------------------------------------------EEEECTTCCSCEEEEE
T ss_pred             ecccCcceeeeeeccccccc--------------------------------------------cccccccccccccccc
Confidence            99999999998754322100                                            0122334666777777


Q ss_pred             ECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         347 WGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       347 ~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      |++++ .+++|+.|+++++|+.............                                              
T Consensus       149 ~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~----------------------------------------------  182 (371)
T d1k8kc_         149 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT----------------------------------------------  182 (371)
T ss_dssp             ECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCB----------------------------------------------
T ss_pred             ccccccceeccccCcEEEEEeeccCccccccccc----------------------------------------------
Confidence            77765 5777778888888876543211000000                                              


Q ss_pred             CCCCcEEEEEeCCCeEEEEcCC-CCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcce
Q psy2671         426 CPEGEKLVSGSDDFTLFLWNPE-KEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQA  504 (573)
Q Consensus       426 ~~~~~~l~sg~~dg~i~lwd~~-~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~  504 (573)
                                       .|+.. .....+....+|...|.+++|+|+|++|++++.|+.|++||..+++.+..+..|..+
T Consensus       183 -----------------~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~  245 (371)
T d1k8kc_         183 -----------------PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP  245 (371)
T ss_dssp             -----------------TTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCC
T ss_pred             -----------------cccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccccc
Confidence                             00000 011223445678888999999999999999999999999999999999999999999


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCcc--ccc---------------------------------------ccccCc
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTK--KIE---------------------------------------QDLPGH  543 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~--~~~---------------------------------------~~l~~h  543 (573)
                      |.+++|+||+++|++|+ |+.+++|.....  +..                                       .....|
T Consensus       246 v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H  324 (371)
T d1k8kc_         246 LLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLH  324 (371)
T ss_dssp             EEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSS
T ss_pred             ceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccc
Confidence            99999999998888665 777777654321  100                                       001248


Q ss_pred             CCCEEEEEEccCC----CEEEEeeCCCcEEEcc
Q psy2671         544 GDEVYAVDWAPDG----EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       544 ~~~v~~~~~s~d~----~~l~s~~~d~~i~iw~  572 (573)
                      .+.|+++++++.+    ..|+|+|.||.|++|+
T Consensus       325 ~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~  357 (371)
T d1k8kc_         325 KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD  357 (371)
T ss_dssp             SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred             cCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEe
Confidence            8899999998865    3589999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-38  Score=309.06  Aligned_cols=323  Identities=28%  Similarity=0.506  Sum_probs=260.7

Q ss_pred             cccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccce
Q psy2671         101 RCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEV  180 (573)
Q Consensus       101 ~~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (573)
                      ++...|.||++.|.+ +++++|++|||||.||+|||||+.+++++                                   
T Consensus         7 ~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~-----------------------------------   50 (342)
T d2ovrb2           7 KSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL-----------------------------------   50 (342)
T ss_dssp             CCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE-----------------------------------
T ss_pred             CcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEE-----------------------------------
Confidence            455678899999875 36678999999999999999999887654                                   


Q ss_pred             EEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCC
Q psy2671         181 VDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~d  260 (573)
                                          .++.+|.+.|.+++|+|+  +|++|+.|+++++|+............+...+....+.  
T Consensus        51 --------------------~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  106 (342)
T d2ovrb2          51 --------------------RTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--  106 (342)
T ss_dssp             --------------------EECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--
T ss_pred             --------------------EEEeCCCCCEEEEEeCCC--ccccceecccccccccccccceecccccceeEeeeecc--
Confidence                                235689999999999986  89999999999999999888777777777777766554  


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCc
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTR  340 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~  340 (573)
                      ...++.+..|+.+.+|+..+++..... ..+........       .....++.++.|+.+++||......+..+.+|..
T Consensus       107 ~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~  178 (342)
T d2ovrb2         107 EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQ-------YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN  178 (342)
T ss_dssp             TTEEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEE-------ECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS
T ss_pred             cccccccccceeEEEeecccccceeee-ecccccceeec-------cccceeeeecCCCeEEEeecccceeeEEEcCccc
Confidence            457888999999999999887654321 12222211111       1335688999999999999999999999999998


Q ss_pred             cEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhh
Q psy2671         341 SVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALA  420 (573)
Q Consensus       341 ~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  420 (573)
                      .+.+..+.+ ..+++++.|++|++|+++.+..+..+.+|...+..++++                               
T Consensus       179 ~~~~~~~~~-~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-------------------------------  226 (342)
T d2ovrb2         179 RVYSLQFDG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK-------------------------------  226 (342)
T ss_dssp             CEEEEEECS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE-------------------------------
T ss_pred             ccccccCCC-CEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC-------------------------------
Confidence            888887754 478999999999999999999999999988877666543                               


Q ss_pred             heeeeCCCCcEEEEEeCCCeEEEEcCCCCccce--eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEee
Q psy2671         421 KYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSL--ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTL  498 (573)
Q Consensus       421 ~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~--~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~  498 (573)
                              +.++++|+.|+.|++||........  .....|...+.++.+++  +++++|+.||+|++||+++++.+..+
T Consensus       227 --------~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~s~Dg~i~iwd~~tg~~i~~~  296 (342)
T d2ovrb2         227 --------DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNL  296 (342)
T ss_dssp             --------TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             --------CCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCC--CeeEEEcCCCEEEEEECCCCCEEEEE
Confidence                    4689999999999999987654322  22334666777777764  69999999999999999999988776


Q ss_pred             c-----CCcceEEEEEECCCCCEEEEEeCCCc----EEEEeCCc
Q psy2671         499 R-----GHVQAVYMVAWSSDSRLLVSGSADST----LKVWNMKT  533 (573)
Q Consensus       499 ~-----~h~~~v~~v~~s~dg~~las~s~D~~----v~vwd~~~  533 (573)
                      .     +|...|++++|+|++.+||+|+.||+    |++||+..
T Consensus       297 ~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         297 VTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             EECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred             ecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence            3     57788999999999999999999986    99999853

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=301.68  Aligned_cols=317  Identities=28%  Similarity=0.530  Sum_probs=257.0

Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ...+.||.+.|.+ +++++|++|||||.|++|+|||+.+++++..+.+|...|.+++|+|+  +|++|+.|+.+++|+..
T Consensus         9 ~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~   85 (342)
T d2ovrb2           9 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAE   85 (342)
T ss_dssp             CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETT
T ss_pred             CEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccc
Confidence            3457799999876 47778999999999999999999999999999999999999999875  89999999999999988


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      ....... ...+...+......       ...+..+..|+.+.+|+..+++....+..+....... ......+++++.|
T Consensus        86 ~~~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d  156 (342)
T d2ovrb2          86 TGECIHT-LYGHTSTVRCMHLH-------EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV-QYDGRRVVSGAYD  156 (342)
T ss_dssp             TTEEEEE-ECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE-EECSSCEEEEETT
T ss_pred             cccceec-ccccceeEeeeecc-------cccccccccceeEEEeecccccceeeeecccccceee-ccccceeeeecCC
Confidence            7654322 22333344443332       2467888999999999999888777766555444333 3344578899999


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      +.+++|+.........+.+|...+....                                       +++.++++|+.||
T Consensus       157 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~l~s~~~dg  197 (342)
T d2ovrb2         157 FMVKVWDPETETCLHTLQGHTNRVYSLQ---------------------------------------FDGIHVVSGSLDT  197 (342)
T ss_dssp             SCEEEEEGGGTEEEEEECCCSSCEEEEE---------------------------------------ECSSEEEEEETTS
T ss_pred             CeEEEeecccceeeEEEcCccccccccc---------------------------------------CCCCEEEEEeCCC
Confidence            9999999998888888887765443322                                       3467899999999


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC---CcceEEEEEECCCCCE
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG---HVQAVYMVAWSSDSRL  516 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~---h~~~v~~v~~s~dg~~  516 (573)
                      +|++||++... .+....+|...+.++++++  ++|++|+.||.|++||....+....+.+   |...+.+++++  +.+
T Consensus       198 ~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  272 (342)
T d2ovrb2         198 SIRVWDVETGN-CIHTLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNF  272 (342)
T ss_dssp             CEEEEETTTCC-EEEEECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSE
T ss_pred             eEEEeecccce-eeeEecccccceeEEecCC--CEEEEEcCCCEEEEEecccccccccccccceeeeceeecccC--CCe
Confidence            99999987654 4667788999998887765  6999999999999999998887777654   56677777765  569


Q ss_pred             EEEEeCCCcEEEEeCCcccccccc-----cCcCCCEEEEEEccCCCEEEEeeCCCc----EEEcc
Q psy2671         517 LVSGSADSTLKVWNMKTKKIEQDL-----PGHGDEVYAVDWAPDGEKVASGGKDKV----LRLWQ  572 (573)
Q Consensus       517 las~s~D~~v~vwd~~~~~~~~~l-----~~h~~~v~~~~~s~d~~~l~s~~~d~~----i~iw~  572 (573)
                      +++|+.||+|++||+++++.++.+     .+|.+.|++++|+|++.+|++|+.||+    |++|+
T Consensus       273 ~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~D  337 (342)
T d2ovrb2         273 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD  337 (342)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred             eEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEe
Confidence            999999999999999999887665     468889999999999999999999985    89997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.4e-37  Score=294.59  Aligned_cols=286  Identities=19%  Similarity=0.232  Sum_probs=227.7

Q ss_pred             CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       239 ~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      |+....+.||.+.|++++|+|||++|+||+.||+|++||+++++.+.....+|...|.++.|.|     ++ .+++++.|
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~-----~g-~~~~~~~d   75 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTS-----KG-DLFTVSWD   75 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-----TS-CEEEEETT
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeec-----cc-eeecccce
Confidence            4556788999999999999999999999999999999999999877665578999999999976     33 36778889


Q ss_pred             CcEEEEECCCCeE---EEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeE
Q psy2671         319 GAIRIWDVILSQC---VRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMR  395 (573)
Q Consensus       319 g~v~iwd~~~~~~---~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  395 (573)
                      +.+++|+......   ......+...+.++++++++.+++++.++.+++|+...  .......+  .+..++        
T Consensus        76 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~--~~~~~~~~--~~~~~~--------  143 (299)
T d1nr0a2          76 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK--LTEVPISY--NSSCVA--------  143 (299)
T ss_dssp             TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE--EEEEECSS--CEEEEE--------
T ss_pred             eeEEEeccCCcccccccccccccccccccccccccccccccccccccccccccc--cccccccc--cccccc--------
Confidence            9999999765422   12233567788999999998777777888999998542  22222111  122222        


Q ss_pred             EEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEE
Q psy2671         396 VEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII  475 (573)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l  475 (573)
                                                   .+|++.++++|+.|+.+++||+++..........|...|++++|+|++++|
T Consensus       144 -----------------------------~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l  194 (299)
T d1nr0a2         144 -----------------------------LSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFL  194 (299)
T ss_dssp             -----------------------------ECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEE
T ss_pred             -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                                         236788999999999999999877654444556788999999999999999


Q ss_pred             EEeeCCCcEEEEeCCCCeEE---EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccc--ccccC-cCCCEEE
Q psy2671         476 ASASFDKSIKLWDGRIGKFI---TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIE--QDLPG-HGDEVYA  549 (573)
Q Consensus       476 as~s~dg~i~lwd~~~~~~~---~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~--~~l~~-h~~~v~~  549 (573)
                      ++++.|+.|++||..++..+   ..+.+|...|++++|+|++++||+|+.|+.|++||+++++..  ..... +...|.+
T Consensus       195 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~  274 (299)
T d1nr0a2         195 VATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNS  274 (299)
T ss_dssp             EEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEE
Confidence            99999999999999877654   346679999999999999999999999999999999876543  22233 4456777


Q ss_pred             EEEccCCCEEEEeeCCCcEEEcc
Q psy2671         550 VDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       550 ~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.| +++++|+++|.|++|++|+
T Consensus       275 ~~~-~~~~~l~s~s~D~~i~iWd  296 (299)
T d1nr0a2         275 VIW-LNETTIVSAGQDSNIKFWN  296 (299)
T ss_dssp             EEE-EETTEEEEEETTSCEEEEE
T ss_pred             EEE-CCCCEEEEEeCCCEEEEEe
Confidence            755 5578999999999999997

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.2e-37  Score=293.99  Aligned_cols=285  Identities=19%  Similarity=0.279  Sum_probs=214.5

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEE
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDI  183 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (573)
                      +.+.||.++|++|+|+|++++|||||.|++|+|||+++++++..                                    
T Consensus         6 ~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~------------------------------------   49 (299)
T d1nr0a2           6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV------------------------------------   49 (299)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC------------------------------------
T ss_pred             eEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE------------------------------------
Confidence            46789999999999999999999999999999999988764321                                    


Q ss_pred             EEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEecCCCCcEEEEEEcCC
Q psy2671         184 VYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKCEGHKHWVLCIAWSPD  260 (573)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~~~h~~~V~~v~~s~d  260 (573)
                                        ...+|...|++++|+|+|+ +++++.|+.+++|+......   ......+...+.+++|+|+
T Consensus        50 ------------------~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  110 (299)
T d1nr0a2          50 ------------------FPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSAD  110 (299)
T ss_dssp             ------------------SSCSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTT
T ss_pred             ------------------EcCCCCCcEEEEEeeccce-eecccceeeEEEeccCCccccccccccccccccccccccccc
Confidence                              1246899999999999997 56677899999999765321   1223356778999999999


Q ss_pred             CCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEE-EecCCC
Q psy2671         261 SKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVR-VLTSHT  339 (573)
Q Consensus       261 g~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~h~  339 (573)
                      ++.++++ .++.+++|+......   ..  ....+.+++|.|     +++++++++.||.|++||+..++... ....|.
T Consensus       111 g~~~~~~-~~~~i~~~~~~~~~~---~~--~~~~~~~~~~s~-----~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~  179 (299)
T d1nr0a2         111 GDIAVAA-CYKHIAIYSHGKLTE---VP--ISYNSSCVALSN-----DKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHP  179 (299)
T ss_dssp             SSCEEEE-ESSEEEEEETTEEEE---EE--CSSCEEEEEECT-----TSCEEEEEETTSEEEEEEEETTEEEEEEEEECS
T ss_pred             ccccccc-ccccccccccccccc---cc--cccccccccccc-----ccccccccccccccccccccccccccccccccc
Confidence            9866654 567899998643221   11  223456677655     56889999999999999998776544 345678


Q ss_pred             ccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhh
Q psy2671         340 RSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHA  418 (573)
Q Consensus       340 ~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  418 (573)
                      ..|.+++|++++ .+++++.|+.|++|++.++...                                             
T Consensus       180 ~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~---------------------------------------------  214 (299)
T d1nr0a2         180 AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL---------------------------------------------  214 (299)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE---------------------------------------------
T ss_pred             ccccccccccccccccccccccccccccccccccc---------------------------------------------
Confidence            888888887765 5677777777777776543211                                             


Q ss_pred             hhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeE--EE
Q psy2671         419 LAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKF--IT  496 (573)
Q Consensus       419 ~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~--~~  496 (573)
                                                      .....+.+|...|++++|+|++++|++|+.||.|++||++++..  ..
T Consensus       215 --------------------------------~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~  262 (299)
T d1nr0a2         215 --------------------------------AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII  262 (299)
T ss_dssp             --------------------------------SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEE
T ss_pred             --------------------------------cccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEE
Confidence                                            01123456788899999999999999999999999999987643  23


Q ss_pred             eecCC-cceEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         497 TLRGH-VQAVYMVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       497 ~~~~h-~~~v~~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      ....| ...+.++.| +++++|++++.|++|++||+.
T Consensus       263 ~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         263 IKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             ETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred             EecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence            33333 456766655 567899999999999999973

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.6e-35  Score=288.84  Aligned_cols=244  Identities=16%  Similarity=0.227  Sum_probs=195.6

Q ss_pred             CCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCce
Q psy2671         206 HAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQ  283 (573)
Q Consensus       206 h~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~  283 (573)
                      +.++|+|++|+|||++||+|+.|+.|+|||+.+++  .+..+++|.+.|.+++|+|++++|++|+.|++|++||+.++..
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            45789999999999999999999999999998765  5677899999999999999999999999999999999765432


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeCCCeE
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQDRTI  362 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i  362 (573)
                      .                                              +...+.+|...|.+++|++++ .+++++.|+++
T Consensus        86 ~----------------------------------------------~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i  119 (371)
T d1k8kc_          86 K----------------------------------------------PTLVILRINRAARCVRWAPNEKKFAVGSGSRVI  119 (371)
T ss_dssp             E----------------------------------------------EEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred             c----------------------------------------------cccccccccccccccccccccccceeecccCcc
Confidence            1                                              112233456667777776655 56667777777


Q ss_pred             EEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEE
Q psy2671         363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLF  442 (573)
Q Consensus       363 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~  442 (573)
                      ++|+.......                                                                     
T Consensus       120 ~i~~~~~~~~~---------------------------------------------------------------------  130 (371)
T d1k8kc_         120 SICYFEQENDW---------------------------------------------------------------------  130 (371)
T ss_dssp             EEEEEETTTTE---------------------------------------------------------------------
T ss_pred             eeeeeeccccc---------------------------------------------------------------------
Confidence            77764321100                                                                     


Q ss_pred             EEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC------------------eEEEeecCCcce
Q psy2671         443 LWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG------------------KFITTLRGHVQA  504 (573)
Q Consensus       443 lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~------------------~~~~~~~~h~~~  504 (573)
                             ........+|...|.+++|+|++++||+|+.||+|++||....                  +.+....+|...
T Consensus       131 -------~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (371)
T d1k8kc_         131 -------WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW  203 (371)
T ss_dssp             -------EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred             -------ccccccccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCc
Confidence                   0011223457778999999999999999999999999997532                  355667789999


Q ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         505 VYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       505 v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      |.+++|+|+|++|++++.|+.|++||+.+++.+..+.+|..+|.+++|+||+++|++| .|+.+++|.
T Consensus       204 v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g-~d~~~~~~~  270 (371)
T d1k8kc_         204 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFT  270 (371)
T ss_dssp             EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEE
T ss_pred             EEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEE-cCCceEEEE
Confidence            9999999999999999999999999999999999999999999999999999777654 577766663

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.8e-34  Score=276.67  Aligned_cols=281  Identities=20%  Similarity=0.333  Sum_probs=221.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCe-EEEEECCCC--eeeEEecCCC-CcEEEEEEcC--CCCeEEEEeeCCeEEEEECCCCc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTT-VRFWDVTTQ--TPLFKCEGHK-HWVLCIAWSP--DSKQLVSGCKNGVIHAWDSSTGK  282 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~-i~iwd~~~~--~~~~~~~~h~-~~V~~v~~s~--dg~~l~sgs~dg~i~vwd~~~~~  282 (573)
                      .+++++|+|+|+.||.++.+.. |+.|+....  ..+..+.+|. ..|++++|+|  +|++|++|+.||+|++||+..+.
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~   98 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK   98 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCc
Confidence            4678999999999999876653 566765433  3456677874 6799999998  66799999999999999987654


Q ss_pred             eec-------ccccCCcccEEEEEecccccCCCCCEEEEEe--CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--
Q psy2671         283 QIG-------QPMRGHKQWITALSWEPFHLNHQCRRFASSG--KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--  351 (573)
Q Consensus       283 ~~~-------~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--  351 (573)
                      ...       .....|...|.+++|.+     +++++++++  .++.+++|+..+++++..+.+|...|.+++|++++  
T Consensus        99 ~~~~~~~~~~~~~~~~~~~v~~v~~s~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  173 (325)
T d1pgua1          99 ESNSVEVNVKSEFQVLAGPISDISWDF-----EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM  173 (325)
T ss_dssp             GGTEEEEEEEEEEECCSSCEEEEEECT-----TSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred             ceeeeecccccccccccCcEEEEEECC-----CCCccceeeccccceEEEEeecccccceeeeecccccccccccccccc
Confidence            321       12346778899999876     567777665  47789999999999999999999999999998765  


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                      .+++++.|+.+++|+...++.....                                                       
T Consensus       174 ~~~~~~~d~~v~~~d~~~~~~~~~~-------------------------------------------------------  198 (325)
T d1pgua1         174 RSMTVGDDGSVVFYQGPPFKFSASD-------------------------------------------------------  198 (325)
T ss_dssp             EEEEEETTTEEEEEETTTBEEEEEE-------------------------------------------------------
T ss_pred             eEEEeecccccccccccccccceec-------------------------------------------------------
Confidence            4778888899998887654322111                                                       


Q ss_pred             EEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCC-CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEE
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD-GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAW  510 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~-g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~  510 (573)
                                            ....+|...|.+++|+|+ +.++++++.||.|++||.++++.+.++.+|...+..+.|
T Consensus       199 ----------------------~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~  256 (325)
T d1pgua1         199 ----------------------RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIF  256 (325)
T ss_dssp             ----------------------CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred             ----------------------ccccCCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccccccee
Confidence                                  112346677999999996 689999999999999999999999999998877655555


Q ss_pred             C---CCCCEEEEEeCCCcEEEEeCCcccccccccCcCCC----EEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         511 S---SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDE----VYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       511 s---~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~----v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +   |||++|++++.|++|+|||+++++.++.+..|...    ..++.|.++ .+|+++|.||+|++|+
T Consensus       257 s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwd  324 (325)
T d1pgua1         257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYE  324 (325)
T ss_dssp             EEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEE
T ss_pred             eeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCC-CEEEEEECCCEEEEEE
Confidence            4   68999999999999999999999988776655543    234555544 4799999999999997

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.6e-34  Score=283.37  Aligned_cols=295  Identities=21%  Similarity=0.289  Sum_probs=212.9

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe------eeEEecCCCCcEEEEEE------cC-CCCeEEEEe
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT------PLFKCEGHKHWVLCIAW------SP-DSKQLVSGC  268 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~------~~~~~~~h~~~V~~v~~------s~-dg~~l~sgs  268 (573)
                      ...||.+.|.++++++  ++++|||.|++|+|||..+..      .......|...+..+..      ++ ++..+++++
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~   86 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS   86 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEe
Confidence            3579999999999875  589999999999999976542      12233345544433322      21 334678999


Q ss_pred             eCCeEEEEECCCCceecc---------cccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---------
Q psy2671         269 KNGVIHAWDSSTGKQIGQ---------PMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---------  330 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~---------~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---------  330 (573)
                      .||.|++|+.........         ....+...+..++|.+......+.++++++.||++++|++....         
T Consensus        87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~  166 (393)
T d1sq9a_          87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN  166 (393)
T ss_dssp             TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred             CCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeee
Confidence            999999998754332110         11224455667777664444456789999999999999974321         


Q ss_pred             ---------EEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCC
Q psy2671         331 ---------CVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       331 ---------~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                               .......+...+.+++|++++.+++|+.|++|++||+.+++.+..++.                       
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~-----------------------  223 (393)
T d1sq9a_         167 WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFES-----------------------  223 (393)
T ss_dssp             CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEEC-----------------------
T ss_pred             eccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeeccccccccccc-----------------------
Confidence                     011122344557778888777778888888888888776654332211                       


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCC
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFD  481 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~d  481 (573)
                                                                         ...+.+|...|++++|+|||++|++|+.|
T Consensus       224 ---------------------------------------------------~~~l~~h~~~V~~l~~spdg~~l~sgs~D  252 (393)
T d1sq9a_         224 ---------------------------------------------------QHSMINNSNSIRSVKFSPQGSLLAIAHDS  252 (393)
T ss_dssp             ---------------------------------------------------CC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred             ---------------------------------------------------ccccccccceEEEcccccccceeeeecCC
Confidence                                                               12345788999999999999999999998


Q ss_pred             Cc---EEEEeCCCCeEEEeec-------------CCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCC
Q psy2671         482 KS---IKLWDGRIGKFITTLR-------------GHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGD  545 (573)
Q Consensus       482 g~---i~lwd~~~~~~~~~~~-------------~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~  545 (573)
                      ++   |++||+++++.+..+.             +|...|++++|+||+++|||||.|++|+|||++++++++.+.+|.+
T Consensus       253 ~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~  332 (393)
T d1sq9a_         253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD  332 (393)
T ss_dssp             TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred             CCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCC
Confidence            75   8999999998777663             7999999999999999999999999999999999999998888864


Q ss_pred             C---------------------EEEEEEccCC----------CEEEEeeCCCcEEEcc
Q psy2671         546 E---------------------VYAVDWAPDG----------EKVASGGKDKVLRLWQ  572 (573)
Q Consensus       546 ~---------------------v~~~~~s~d~----------~~l~s~~~d~~i~iw~  572 (573)
                      .                     ++++.|.+++          +.|++++.|+.|++|+
T Consensus       333 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~  390 (393)
T d1sq9a_         333 DIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  390 (393)
T ss_dssp             GCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             cccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEEe
Confidence            3                     4566666543          3588899999999986

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-33  Score=275.66  Aligned_cols=301  Identities=21%  Similarity=0.367  Sum_probs=217.3

Q ss_pred             cCCCCCCCcE-EEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         201 SSMPGHAEAV-ISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       201 ~~~~gh~~~V-~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      .++.||.+.| +|++  +++++||||+.|++|+|||+.+++.+..+.+|.+.|.+++|+|+ .+|++|+.|++|++|+..
T Consensus         6 ~tL~GH~~~vitc~~--~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~   82 (355)
T d1nexb2           6 TTLRGHMTSVITCLQ--FEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIK   82 (355)
T ss_dssp             EEEECCSSSCEEEEE--EETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETT
T ss_pred             EEECCcCCCcEEEEE--ECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEeccccccccccc
Confidence            3577998886 5554  56889999999999999999999999999999999999999986 489999999999999998


Q ss_pred             CCceeccccc-CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC
Q psy2671         280 TGKQIGQPMR-GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ  358 (573)
Q Consensus       280 ~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~  358 (573)
                      .......... .+........+.     .+++.+++++.|+.|++||+................. ......        
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~--------  148 (355)
T d1nexb2          83 KGCCTHVFEGHNSTVRCLDIVEY-----KNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL-VFHTPE--------  148 (355)
T ss_dssp             TTEEEEEECCCSSCEEEEEEEEE-----TTEEEEEEEETTSEEEEEECCC-----------CCCE-EESCTT--------
T ss_pred             ccccccccccccccccccccccc-----cccceeeeecCCCcEEEEEccCCceeccccccceecc-ceeccc--------
Confidence            8765433222 222223333332     2456899999999999999987654433221111000 000000        


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                               ...........|...+.                                       ...+++..++++..|
T Consensus       149 ---------~~~~~~~~~~~~~~~v~---------------------------------------~~~~~~~~~~~~~~d  180 (355)
T d1nexb2         149 ---------ENPYFVGVLRGHMASVR---------------------------------------TVSGHGNIVVSGSYD  180 (355)
T ss_dssp             ---------TCTTEEEEEECCSSCEE---------------------------------------EEEEETTEEEEEETT
T ss_pred             ---------cccceeeeeeecccccc---------------------------------------ccccccceeeeeccc
Confidence                     00000111111111111                                       112457789999999


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLV  518 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~la  518 (573)
                      +.+++||..+.+ .+....++...+.++.|+|++.++++++.|+.|++||.+++..+..+.+|...|.+++|++  ++|+
T Consensus       181 ~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~--~~l~  257 (355)
T d1nexb2         181 NTLIVWDVAQMK-CLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--KFLV  257 (355)
T ss_dssp             SCEEEEETTTTE-EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS--SEEE
T ss_pred             ceeeeeeccccc-ceeeeeccccccccccccccceeeecccccceEEeeecccccccccccccccccccccccc--ceee
Confidence            999999987654 4556677888899999999999999999999999999999999999999999999999874  6999


Q ss_pred             EEeCCCcEEEEeCCcccccccccCcCCCEEEE-EEccCCCEEEEeeCCCcEEEcc
Q psy2671         519 SGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV-DWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       519 s~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~-~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +|+.|++|++||+++...  .+..|...+.++ .|++++++|++ |.|++|++|+
T Consensus       258 ~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~-g~d~~i~vwd  309 (355)
T d1nexb2         258 SAAADGSIRGWDANDYSR--KFSYHHTNLSAITTFYVSDNILVS-GSENQFNIYN  309 (355)
T ss_dssp             EECTTSEEEEEETTTCCE--EEEEECTTCCCCCEEEECSSEEEE-EETTEEEEEE
T ss_pred             eeecccccccccccccce--ecccccCCceEEEEEcCCCCEEEE-EeCCEEEEEE
Confidence            999999999999987654  345566666665 45667665555 5699999997

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.5e-34  Score=269.96  Aligned_cols=270  Identities=19%  Similarity=0.307  Sum_probs=219.1

Q ss_pred             CeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC
Q psy2671         239 QTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD  318 (573)
Q Consensus       239 ~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d  318 (573)
                      .+++.++.||..+|++++|+|    |+||+.||+|++||+.++      ..+|...|.++.+.+      +..+++++.|
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~------~~~h~~~V~~~~~~~------~~~~~s~s~D   66 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM------HQDHSNLIVSLDNSK------AQEYSSISWD   66 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE------ECCCCSCEEEEECCS------TTCCEEEETT
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC------CCCCCCCEEEEEecC------CCeEEEEeec
Confidence            467889999999999999987    999999999999998654      257899999998754      3468999999


Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEE
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEA  398 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~  398 (573)
                      +++++|++...+       ....+.++.+.+++.++..+.++.+.+|+..++.....+..+.. ..              
T Consensus        67 ~~v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------------  124 (287)
T d1pgua2          67 DTLKVNGITKHE-------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSP-GS--------------  124 (287)
T ss_dssp             TEEEETTEEEEE-------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSC-EE--------------
T ss_pred             cccccccccccc-------cccceeeeeeccCCceEEEeecccceeeeccceeeeeeccccce-ee--------------
Confidence            999999864321       23456778888888888888888999999888876665543321 11              


Q ss_pred             cCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC-CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEE
Q psy2671         399 TSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD-FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIAS  477 (573)
Q Consensus       399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las  477 (573)
                                               ..++++..+++++.+ +.+++|+.............|...+++++|+|++++|++
T Consensus       125 -------------------------~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~  179 (287)
T d1pgua2         125 -------------------------AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA  179 (287)
T ss_dssp             -------------------------EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEE
T ss_pred             -------------------------eeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccc
Confidence                                     112446677777766 579999987654444444567788999999999999999


Q ss_pred             eeCCCcEEEEeCCCCeEEE-eecCCcceEEEEEECCC----------CCEEEEEeCCCcEEEEeCCc-ccccccccCcCC
Q psy2671         478 ASFDKSIKLWDGRIGKFIT-TLRGHVQAVYMVAWSSD----------SRLLVSGSADSTLKVWNMKT-KKIEQDLPGHGD  545 (573)
Q Consensus       478 ~s~dg~i~lwd~~~~~~~~-~~~~h~~~v~~v~~s~d----------g~~las~s~D~~v~vwd~~~-~~~~~~l~~h~~  545 (573)
                      |+.||.|++||..+++... .+.+|...|.+++|+|+          +.+||+|+.|++|++||++. .+.+..+.+|.+
T Consensus       180 g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~  259 (287)
T d1pgua2         180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD  259 (287)
T ss_dssp             EETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT
T ss_pred             ccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCC
Confidence            9999999999999988655 46789999999999874          56899999999999999976 556777889999


Q ss_pred             CEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         546 EVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       546 ~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      .|+++.|+|++ .|+|+|.|++|++|+
T Consensus       260 ~V~~v~~~~~~-~l~s~g~D~~v~iW~  285 (287)
T d1pgua2         260 GVNNLLWETPS-TLVSSGADACIKRWN  285 (287)
T ss_dssp             CEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred             CeEEEEECCCC-EEEEEECCCeEEEEE
Confidence            99999999986 699999999999997

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.9e-33  Score=266.46  Aligned_cols=246  Identities=30%  Similarity=0.506  Sum_probs=202.3

Q ss_pred             ccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECC
Q psy2671         200 TSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSS  279 (573)
Q Consensus       200 ~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~  279 (573)
                      ..++.||.++|++++|+|++++||||+.|++|+|||+.+++.+..+.+|...|.+++|+|++.++++++.++.+..|+..
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         280 TGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       280 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      ..... ....+|...+..+.|.|     +++.+++++.|+                                        
T Consensus        90 ~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~d~----------------------------------------  123 (317)
T d1vyhc1          90 GFECI-RTMHGHDHNVSSVSIMP-----NGDHIVSASRDK----------------------------------------  123 (317)
T ss_dssp             SSCEE-ECCCCCSSCEEEEEECS-----SSSEEEEEETTS----------------------------------------
T ss_pred             ccccc-cccccccccceeeeccC-----CCceEEeeccCc----------------------------------------
Confidence            66543 23445555444444432     222333333333                                        


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                       .+++|+++++.                                                                    
T Consensus       124 -~~~~~~~~~~~--------------------------------------------------------------------  134 (317)
T d1vyhc1         124 -TIKMWEVQTGY--------------------------------------------------------------------  134 (317)
T ss_dssp             -EEEEEETTTCC--------------------------------------------------------------------
T ss_pred             -ceeEeecccce--------------------------------------------------------------------
Confidence             33333332221                                                                    


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCC-----
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDS-----  514 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg-----  514 (573)
                                  ....+.+|...+.+++|+|++++|++++.|+.|++|+..+++.+..+.+|...+.+++|+|++     
T Consensus       135 ------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  202 (317)
T d1vyhc1         135 ------------CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI  202 (317)
T ss_dssp             ------------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred             ------------eeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeecccccee
Confidence                        122334566678889999999999999999999999999999999999999999999998753     


Q ss_pred             ---------------CEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         515 ---------------RLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       515 ---------------~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                                     .++++++.|+.|++||+++++.+..+.+|...|.++.|+|++++|++++.||.|++|+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd  275 (317)
T d1vyhc1         203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD  275 (317)
T ss_dssp             GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred             eccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEE
Confidence                           4789999999999999999999999999999999999999999999999999999997

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.8e-33  Score=270.61  Aligned_cols=284  Identities=20%  Similarity=0.268  Sum_probs=211.9

Q ss_pred             cEEEEEEcCCCCeeEEeeCCC-cEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceee
Q psy2671         112 AVISVKFSPNGRSLASGSGDT-TVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAV  190 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~-~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (573)
                      .+++++|+|+++.||.++.+. .|+.||.......                                             
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~---------------------------------------------   53 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVP---------------------------------------------   53 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSC---------------------------------------------
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCcc---------------------------------------------
Confidence            357889999999999987664 4677875432110                                             


Q ss_pred             EEEeeccccccCCCCC-CCcEEEEEEcC--CCCeEEEEeCCCeEEEEECCCCeee--------EEecCCCCcEEEEEEcC
Q psy2671         191 FQVRPVTRCTSSMPGH-AEAVISVKFSP--NGRSLASGSGDTTVRFWDVTTQTPL--------FKCEGHKHWVLCIAWSP  259 (573)
Q Consensus       191 ~~~~~~~~~~~~~~gh-~~~V~~~~fsp--~g~~las~s~d~~i~iwd~~~~~~~--------~~~~~h~~~V~~v~~s~  259 (573)
                              ....+.|| ...|++++|+|  +|++||+|+.||+|+|||+..+...        .....|...|.+++|++
T Consensus        54 --------~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~  125 (325)
T d1pgua1          54 --------PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF  125 (325)
T ss_dssp             --------SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT
T ss_pred             --------ceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECC
Confidence                    01224467 46899999998  5789999999999999998654321        23457889999999999


Q ss_pred             CCCeEEEEee--CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEe--
Q psy2671         260 DSKQLVSGCK--NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVL--  335 (573)
Q Consensus       260 dg~~l~sgs~--dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--  335 (573)
                      ++++|++++.  ++.+++|+.++++.+. .+.+|...|.++.|.|.    ...++++++.|+.+++||....+....+  
T Consensus       126 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~----~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~  200 (325)
T d1pgua1         126 EGRRLCVVGEGRDNFGVFISWDSGNSLG-EVSGHSQRINACHLKQS----RPMRSMTVGDDGSVVFYQGPPFKFSASDRT  200 (325)
T ss_dssp             TSSEEEEEECCSSCSEEEEETTTCCEEE-ECCSCSSCEEEEEECSS----SSCEEEEEETTTEEEEEETTTBEEEEEECS
T ss_pred             CCCccceeeccccceEEEEeecccccce-eeeeccccccccccccc----ccceEEEeecccccccccccccccceeccc
Confidence            9999987764  6789999999887663 56789999999999873    2245788999999999999877665543  


Q ss_pred             -cCCCccEEEEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         336 -TSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       336 -~~h~~~v~~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                       ..|...|.+++|+++  ..+++++.|+.|++||.+++.....+.+|...+                             
T Consensus       201 ~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v-----------------------------  251 (325)
T d1pgua1         201 HHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPV-----------------------------  251 (325)
T ss_dssp             SSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCC-----------------------------
T ss_pred             ccCCCCccEEeeeccccceeccccccccceeeeeecccccccccccccccc-----------------------------
Confidence             456677889998875  267778888888888877766655554443211                             


Q ss_pred             hhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671         413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG  492 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~  492 (573)
                                                                     ...+.++.+ |+|++|++++.|+.|+|||++++
T Consensus       252 -----------------------------------------------~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~  283 (325)
T d1pgua1         252 -----------------------------------------------QGGIFALSW-LDSQKFATVGADATIRVWDVTTS  283 (325)
T ss_dssp             -----------------------------------------------CSCEEEEEE-SSSSEEEEEETTSEEEEEETTTT
T ss_pred             -----------------------------------------------ccceeeeec-cCCCEEEEEeCCCeEEEEECCCC
Confidence                                                           112333444 67899999999999999999999


Q ss_pred             eEEEeecCCcce--EE--EEEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         493 KFITTLRGHVQA--VY--MVAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       493 ~~~~~~~~h~~~--v~--~v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      +.+..+..|...  +.  ++.+.++ .+|+++|.||+|++||+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         284 KCVQKWTLDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             EEEEEEECCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEET
T ss_pred             CEEEEEEecCCcccCeEEEEEECCC-CEEEEEECCCEEEEEEC
Confidence            999887665433  23  3444443 47889999999999996

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-32  Score=255.09  Aligned_cols=274  Identities=27%  Similarity=0.516  Sum_probs=222.2

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|...|+|++|  ||++|||||.||+|||||+.+++++                                       
T Consensus        10 ~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~---------------------------------------   48 (293)
T d1p22a2          10 CRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK---------------------------------------   48 (293)
T ss_dssp             CCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE---------------------------------------
T ss_pred             ccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEE---------------------------------------
Confidence            34578999999764  7999999999999999999887654                                       


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeE
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQL  264 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l  264 (573)
                                      .++.||.+.|++++|  ++++|++|+.|++|++|++..+........+.....  .+.+....+
T Consensus        49 ----------------~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  108 (293)
T d1p22a2          49 ----------------RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL--HLRFNNGMM  108 (293)
T ss_dssp             ----------------EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE--EEECCTTEE
T ss_pred             ----------------EEEecCCCCEeeeec--ccceeecccccccccccccccccccccccccccccc--cccccccce
Confidence                            235689999999876  677999999999999999999887766665554433  345566789


Q ss_pred             EEEeeCCeEEEEECCCCcee--cccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         265 VSGCKNGVIHAWDSSTGKQI--GQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       265 ~sgs~dg~i~vwd~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +++..++.+.+|+.......  ......|...+....+.+       ..+++++.|+.+++||..+++.+..+.+|...+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v  181 (293)
T d1p22a2         109 VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD-------KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI  181 (293)
T ss_dssp             EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET-------TEEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred             eecccccceeEeeccccccccccccccccccccccceecc-------cccccccCCCceeeecCCCCcEEEEEccccccc
Confidence            99999999999998875432  233456777787776543       467889999999999999999999999999999


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ..+.+.+ ..+++++.|++|++||+++........+|...+..+.                                   
T Consensus       182 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~-----------------------------------  225 (293)
T d1p22a2         182 ACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR-----------------------------------  225 (293)
T ss_dssp             EEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE-----------------------------------
T ss_pred             ccccCCC-CeEEEecCCCEEEEEecccceeeeeecccceeeeecc-----------------------------------
Confidence            9988865 4789999999999999999888887777766544322                                   


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCC--------ccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEe
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKE--------KKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWD  488 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~--------~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd  488 (573)
                          +++.+|++|+.||+|++||+...        ...+..+.+|...|++++|+  +++|++||.||+|++||
T Consensus       226 ----~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         226 ----FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             ----CCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             ----ccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence                45678999999999999985421        23456778999999999995  56899999999999998

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-32  Score=256.50  Aligned_cols=271  Identities=30%  Similarity=0.532  Sum_probs=218.9

Q ss_pred             CCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCc
Q psy2671         203 MPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGK  282 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~  282 (573)
                      ..+|...|+|++  +||++||||+.||+|+|||+.+++++..+.+|.+.|.+++|  ++++|++|+.|+.|++|++..+.
T Consensus        11 ~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~   86 (293)
T d1p22a2          11 RSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGE   86 (293)
T ss_dssp             CCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             cCCCCCCEEEEE--EcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeeccccccccccccccccc
Confidence            457889999865  58999999999999999999999999999999999999987  57899999999999999999886


Q ss_pred             eecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCe---EEEEecCCCccEEEEEECCCcEEEEEeCC
Q psy2671         283 QIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQ---CVRVLTSHTRSVTCIRWGGSGLIYSASQD  359 (573)
Q Consensus       283 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~l~s~s~d  359 (573)
                      ...... .+........       .....++++..++.+++|+.....   ....+..|...+.+..+.+. .+++++.|
T Consensus        87 ~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~d  157 (293)
T d1p22a2          87 MLNTLI-HHCEAVLHLR-------FNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGD  157 (293)
T ss_dssp             EEEEEC-CCCSCEEEEE-------CCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT-EEEEEETT
T ss_pred             cccccc-cccccccccc-------ccccceeecccccceeEeeccccccccccccccccccccccceeccc-ccccccCC
Confidence            653322 2222222221       133578999999999999987654   34456778888888887654 57789999


Q ss_pred             CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC
Q psy2671         360 RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF  439 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg  439 (573)
                      +.+++|+.+++.....+.++...+..+.+                                       .+..+++++.||
T Consensus       158 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~---------------------------------------~~~~l~~~~~dg  198 (293)
T d1p22a2         158 RTIKVWNTSTCEFVRTLNGHKRGIACLQY---------------------------------------RDRLVVSGSSDN  198 (293)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEE---------------------------------------ETTEEEEEETTS
T ss_pred             CceeeecCCCCcEEEEEcccccccccccC---------------------------------------CCCeEEEecCCC
Confidence            99999999999988888887766655443                                       246899999999


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCC---------CeEEEeecCCcceEEEEEE
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRI---------GKFITTLRGHVQAVYMVAW  510 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~---------~~~~~~~~~h~~~v~~v~~  510 (573)
                      +|++||+++.. .+....+|...+..  +++++.+|++|+.||.|++||...         ...+..+.+|...|++++|
T Consensus       199 ~i~i~d~~~~~-~~~~~~~~~~~v~~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~  275 (293)
T d1p22a2         199 TIRLWDIECGA-CLRVLEGHEELVRC--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF  275 (293)
T ss_dssp             CEEEEETTTCC-EEEEECCCSSCEEE--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE
T ss_pred             EEEEEecccce-eeeeecccceeeee--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEE
Confidence            99999998754 35566777777765  567788999999999999998532         3467889999999999998


Q ss_pred             CCCCCEEEEEeCCCcEEEEe
Q psy2671         511 SSDSRLLVSGSADSTLKVWN  530 (573)
Q Consensus       511 s~dg~~las~s~D~~v~vwd  530 (573)
                      +  +.+|||||.|++|++||
T Consensus       276 d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         276 D--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             C--SSCEEECCSSSEEEEEC
T ss_pred             c--CCEEEEEecCCEEEEeC
Confidence            4  67899999999999997

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-33  Score=273.85  Aligned_cols=319  Identities=13%  Similarity=0.101  Sum_probs=222.5

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      .+.+|++.|++|+|+|++++|||||.||+|||||+.++.+...+                                    
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~------------------------------------   49 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDL------------------------------------   49 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEE------------------------------------
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEE------------------------------------
Confidence            56789999999999999999999999999999999766432110                                    


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcEEEEEEcCC-CCeEEEEeCCCeEEEEECCCCeeeEEecCCC-CcEEEEEEcCCCC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPN-GRSLASGSGDTTVRFWDVTTQTPLFKCEGHK-HWVLCIAWSPDSK  262 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~-g~~las~s~d~~i~iwd~~~~~~~~~~~~h~-~~V~~v~~s~dg~  262 (573)
                                      ....+|.++|++++|+|+ +.+|++|+.|++|++|++...........+. .......+.+++.
T Consensus        50 ----------------~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (342)
T d1yfqa_          50 ----------------LQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDD  113 (342)
T ss_dssp             ----------------EEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTT
T ss_pred             ----------------EEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecccccccccccccccccccccccccccc
Confidence                            011268999999999986 4589999999999999998877665554443 3345556677888


Q ss_pred             eEEEEeeCCeEEEEECCCCceecc---cccCCcc--cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE---EE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQ---PMRGHKQ--WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV---RV  334 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~---~~~~h~~--~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~  334 (573)
                      .+++++.++.+++||++.+.....   ....+..  ......+.     ..+..+++++.|+.|++|++......   ..
T Consensus       114 ~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~  188 (342)
T d1yfqa_         114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD-----TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIE  188 (342)
T ss_dssp             EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE-----ECSSEEEEEESTTEEEEEESSCCTTCCCEEE
T ss_pred             cccccccccccceeeccccccceeeecccccccccceeeeeeee-----ccCCceeeecCCCcEEEEecccCcccceeee
Confidence            999999999999999765432211   1111111  11111211     24567999999999999998765432   22


Q ss_pred             ecCCCccEEEEEECCC--cEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCch
Q psy2671         335 LTSHTRSVTCIRWGGS--GLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPE  412 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  412 (573)
                      ...+...+.+..+.+.  ..+++++.|+.+.+|+............                                  
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~----------------------------------  234 (342)
T d1yfqa_         189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSK----------------------------------  234 (342)
T ss_dssp             ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTT----------------------------------
T ss_pred             ecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccc----------------------------------
Confidence            2334445555555432  3688889999999988754321100000                                  


Q ss_pred             hhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCC
Q psy2671         413 ESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIG  492 (573)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~  492 (573)
                                      . .        ....+.      ......+|...|++++|+|++++||+|+.||.|++||.+++
T Consensus       235 ----------------~-~--------~~~~~~------~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~  283 (342)
T d1yfqa_         235 ----------------R-F--------AFRCHR------LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR  283 (342)
T ss_dssp             ----------------C-E--------EEECCC------CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred             ----------------c-c--------eeeeee------eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCC
Confidence                            0 0        000000      01122356778999999999999999999999999999999


Q ss_pred             eEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEE
Q psy2671         493 KFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAV  550 (573)
Q Consensus       493 ~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~  550 (573)
                      +.+..+..+. .+..++|+|+|++||+|+.|.++++|...    ...+..|...|+.+
T Consensus       284 ~~l~~~~~~~-~~~~~~~s~~~~~l~~a~sdd~~~~~~~~----~~~~~~~~~~i~~~  336 (342)
T d1yfqa_         284 KKIKNFAKFN-EDSVVKIACSDNILCLATSDDTFKTNAAI----DQTIELNASSIYII  336 (342)
T ss_dssp             EEEEECCCCS-SSEEEEEEECSSEEEEEEECTHHHHCSSS----CTTSCCCCCEEEEE
T ss_pred             cEEEEecCCC-CCEEEEEEeCCCEEEEEEcCCcEEEeeee----CCCccCCCCeEEEE
Confidence            9998886432 34457788899999999999998888643    34566788888765

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4e-32  Score=257.51  Aligned_cols=267  Identities=18%  Similarity=0.279  Sum_probs=208.8

Q ss_pred             cCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCC
Q psy2671         201 SSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSST  280 (573)
Q Consensus       201 ~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~  280 (573)
                      .++.||.++|++++|+|    |+||+.||+|++||+.++     ..+|...|.+++|++++ .+++++.|+++++|+...
T Consensus         7 ~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~   76 (287)
T d1pgua2           7 KTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITK   76 (287)
T ss_dssp             EEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEE-----ECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEE
T ss_pred             EEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCC-----CCCCCCCEEEEEecCCC-eEEEEeeccccccccccc
Confidence            46789999999999998    899999999999998754     36899999999998765 689999999999998754


Q ss_pred             CceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeC-C
Q psy2671         281 GKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQ-D  359 (573)
Q Consensus       281 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~-d  359 (573)
                      .+.        ...+..+.+.+     ++ .++..+.++.+.+|+...++.+..+..+ ..+.++...++ .+++++. +
T Consensus        77 ~~~--------~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~v~~~~~  140 (287)
T d1pgua2          77 HEF--------GSQPKVASANN-----DG-FTAVLTNDDDLLILQSFTGDIIKSVRLN-SPGSAVSLSQN-YVAVGLEEG  140 (287)
T ss_dssp             EEC--------SSCEEEEEECS-----SS-EEEEEETTSEEEEEETTTCCEEEEEECS-SCEEEEEECSS-EEEEEETTT
T ss_pred             ccc--------ccceeeeeecc-----CC-ceEEEeecccceeeeccceeeeeecccc-ceeeeeeccCc-ceeeecccc
Confidence            221        12234444433     33 4445566778899999988888777654 34555555544 4455554 5


Q ss_pred             CeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         360 RTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       360 ~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      +.+++|++........+. .|...+..++++                                     |++.+|++|+.|
T Consensus       141 ~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s-------------------------------------~~~~~l~~g~~d  183 (287)
T d1pgua2         141 NTIQVFKLSDLEVSFDLKTPLRAKPSYISIS-------------------------------------PSETYIAAGDVM  183 (287)
T ss_dssp             SCEEEEETTEEEEEEECSSCCSSCEEEEEEC-------------------------------------TTSSEEEEEETT
T ss_pred             ceeeeeeccccceeeeeeeccCCceeEEEec-------------------------------------cCcccccccccc
Confidence            689999987665544443 455566666655                                     568899999999


Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCC----------CCEEEEeeCCCcEEEEeCCC-CeEEEeecCCcceEEE
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPD----------GRIIASASFDKSIKLWDGRI-GKFITTLRGHVQAVYM  507 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~----------g~~las~s~dg~i~lwd~~~-~~~~~~~~~h~~~v~~  507 (573)
                      |.|++||+.+.......+.+|...|.+++|+|+          +.++|+|+.|++|++||++. ++.+..+.+|...|++
T Consensus       184 g~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~  263 (287)
T d1pgua2         184 GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNN  263 (287)
T ss_dssp             SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEE
T ss_pred             ccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEE
Confidence            999999998876655667889999999999875          46899999999999999876 5677888899999999


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeC
Q psy2671         508 VAWSSDSRLLVSGSADSTLKVWNM  531 (573)
Q Consensus       508 v~~s~dg~~las~s~D~~v~vwd~  531 (573)
                      ++|+|++ .|++++.|++|++|++
T Consensus       264 v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         264 LLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             EEEEETT-EEEEEETTSCEEEEEE
T ss_pred             EEECCCC-EEEEEECCCeEEEEEE
Confidence            9999986 5889999999999986

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.9e-32  Score=266.98  Aligned_cols=293  Identities=18%  Similarity=0.247  Sum_probs=208.1

Q ss_pred             cCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEE
Q psy2671         105 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIV  184 (573)
Q Consensus       105 ~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (573)
                      ..+||.+.|.++++++  ++++|||.|++|||||..+........                             ...   
T Consensus         9 ~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~-----------------------------~~~---   54 (393)
T d1sq9a_           9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKD-----------------------------KSY---   54 (393)
T ss_dssp             ESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGG-----------------------------GEE---
T ss_pred             cCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccc-----------------------------eeE---
Confidence            4579999999999875  799999999999999987654211000                             000   


Q ss_pred             EeceeeEEEeeccccccCCCCCCCcE------EEEEEcC-CCCeEEEEeCCCeEEEEECCCCeee-----EE-----ecC
Q psy2671         185 YQKQAVFQVRPVTRCTSSMPGHAEAV------ISVKFSP-NGRSLASGSGDTTVRFWDVTTQTPL-----FK-----CEG  247 (573)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~gh~~~V------~~~~fsp-~g~~las~s~d~~i~iwd~~~~~~~-----~~-----~~~  247 (573)
                                       ....|...+      ..+..++ ++..+++++.||.|++|++......     ..     ...
T Consensus        55 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~  117 (393)
T d1sq9a_          55 -----------------SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM  117 (393)
T ss_dssp             -----------------EEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTG
T ss_pred             -----------------eeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeecc
Confidence                             000122221      2222222 3456789999999999987543211     11     122


Q ss_pred             CCCcEEEEEEcCC-----CCeEEEEeeCCeEEEEECCCCcee-----------------cccccCCcccEEEEEeccccc
Q psy2671         248 HKHWVLCIAWSPD-----SKQLVSGCKNGVIHAWDSSTGKQI-----------------GQPMRGHKQWITALSWEPFHL  305 (573)
Q Consensus       248 h~~~V~~v~~s~d-----g~~l~sgs~dg~i~vwd~~~~~~~-----------------~~~~~~h~~~v~~~~~~~~~~  305 (573)
                      +...+.+++|.++     +.++++++.||.+++|++......                 ......+...+.+++|.|   
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~---  194 (393)
T d1sq9a_         118 KKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE---  194 (393)
T ss_dssp             GGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECT---
T ss_pred             CCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECC---
Confidence            4456778888765     467899999999999997532210                 011223445577787765   


Q ss_pred             CCCCCEEEEEeCCCcEEEEECCCCeEEEE------ecCCCccEEEEEECCCc-EEEEEeCCCe---EEEEeCCCCeeeEe
Q psy2671         306 NHQCRRFASSGKDGAIRIWDVILSQCVRV------LTSHTRSVTCIRWGGSG-LIYSASQDRT---IKVWRASDGVMCRT  375 (573)
Q Consensus       306 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~------~~~h~~~v~~~~~~~~~-~l~s~s~d~~---i~vw~~~~~~~~~~  375 (573)
                        + .++++|+.||+|++||+.+++++..      +.+|...|.+++|+|++ .|++|+.|++   |++||++++.....
T Consensus       195 --d-g~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~  271 (393)
T d1sq9a_         195 --R-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS  271 (393)
T ss_dssp             --T-SEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEE
T ss_pred             --C-CEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeee
Confidence              3 3799999999999999998887654      45689999999999887 7899998874   89999998876655


Q ss_pred             ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceee
Q psy2671         376 LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLAR  455 (573)
Q Consensus       376 ~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~  455 (573)
                      +.....                                                                   .......
T Consensus       272 l~~~~~-------------------------------------------------------------------~~~~~~~  284 (393)
T d1sq9a_         272 LSVPTH-------------------------------------------------------------------SSQASLG  284 (393)
T ss_dssp             ECBC---------------------------------------------------------------------------C
T ss_pred             eccccc-------------------------------------------------------------------cccceee
Confidence            432110                                                                   0112334


Q ss_pred             eccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE----EEEECCCCCEEEEEe
Q psy2671         456 MTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY----MVAWSSDSRLLVSGS  521 (573)
Q Consensus       456 ~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~----~v~~s~dg~~las~s  521 (573)
                      +.+|...|++++|+|++++|++||.|++|++||+++++++.++++|...|.    .++|+|++..+++++
T Consensus       285 ~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~  354 (393)
T d1sq9a_         285 EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG  354 (393)
T ss_dssp             CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred             eecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcc
Confidence            568999999999999999999999999999999999999999999998875    478999999887654

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1e-31  Score=259.95  Aligned_cols=287  Identities=15%  Similarity=0.134  Sum_probs=200.2

Q ss_pred             CCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCee---eEEecCCCCcEEEEEEcCCC-CeEEEEeeCCeEEEEE
Q psy2671         202 SMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTP---LFKCEGHKHWVLCIAWSPDS-KQLVSGCKNGVIHAWD  277 (573)
Q Consensus       202 ~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~---~~~~~~h~~~V~~v~~s~dg-~~l~sgs~dg~i~vwd  277 (573)
                      ...+|.+.|++++|+|++++||+||.|++|+|||+.++..   +....+|...|.+++|+|++ .+|++|+.||.|++|+
T Consensus         6 ~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_           6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred             cCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence            4678999999999999999999999999999999876543   23334799999999999865 5789999999999999


Q ss_pred             CCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE----EEecCCCc--cEEEEEECCCc
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV----RVLTSHTR--SVTCIRWGGSG  351 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~h~~--~v~~~~~~~~~  351 (573)
                      ...+.........+........+.     .....+++++.++++++||+......    .....+..  ......+    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  156 (342)
T d1yfqa_          86 LIGSPSFQALTNNEANLGICRICK-----YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM----  156 (342)
T ss_dssp             SSSSSSEEECBSCCCCSCEEEEEE-----ETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEE----
T ss_pred             cccccccccccccccccccccccc-----cccccccccccccccceeeccccccceeeecccccccccceeeeeee----
Confidence            987765543333333333333222     24467999999999999997543211    11111110  0011111    


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                                                                                                .+.+..
T Consensus       157 --------------------------------------------------------------------------~~~~~~  162 (342)
T d1yfqa_         157 --------------------------------------------------------------------------DTNSSR  162 (342)
T ss_dssp             --------------------------------------------------------------------------EECSSE
T ss_pred             --------------------------------------------------------------------------eccCCc
Confidence                                                                                      123445


Q ss_pred             EEEEeCCCeEEEEcCCCCccc--eeeeccccccEEEEEE-CCCCCEEEEeeCCCcEEEEeCCCCeE---------E----
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKS--LARMTGHQQLINCVEF-SPDGRIIASASFDKSIKLWDGRIGKF---------I----  495 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~--~~~~~~h~~~v~~v~~-sp~g~~las~s~dg~i~lwd~~~~~~---------~----  495 (573)
                      +++++.|+.+++|++......  ......+...+.+..+ .+++..+++++.||.+.+|+......         .    
T Consensus       163 ~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T d1yfqa_         163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR  242 (342)
T ss_dssp             EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCC
T ss_pred             eeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeee
Confidence            666666666666665543221  1122223334455554 45778999999999999998654321         1    


Q ss_pred             --EeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         496 --TTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       496 --~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                        ....+|...+++++|+|++++||||+.||.|++||+++++.+..+..+ ..+..++|+|+++.|++++.|+.+++|.
T Consensus       243 ~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             CCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCS
T ss_pred             eccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEee
Confidence              112356778999999999999999999999999999999988877644 3455678899999999999998877774

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=1.1e-30  Score=255.53  Aligned_cols=330  Identities=14%  Similarity=0.036  Sum_probs=231.0

Q ss_pred             EEEcC-CCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671         116 VKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR  194 (573)
Q Consensus       116 l~~s~-~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (573)
                      -.||| ||+++|+++. |.|.|||+.++...                                                 
T Consensus         8 ~~fSP~dG~~~a~~~~-g~v~v~d~~~~~~~-------------------------------------------------   37 (360)
T d1k32a3           8 EDFSPLDGDLIAFVSR-GQAFIQDVSGTYVL-------------------------------------------------   37 (360)
T ss_dssp             EEEEECGGGCEEEEET-TEEEEECTTSSBEE-------------------------------------------------
T ss_pred             ccccCCCCCEEEEEEC-CeEEEEECCCCcEE-------------------------------------------------
Confidence            46999 9999999875 79999999876432                                                 


Q ss_pred             eccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCC--eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCe
Q psy2671         195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGV  272 (573)
Q Consensus       195 ~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~  272 (573)
                              ..+|...|.+++|||||++|++++.+.  .|++||+.+++. ..+..|...|.+++|+|||++|++++.++.
T Consensus        38 --------~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~  108 (360)
T d1k32a3          38 --------KVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFE  108 (360)
T ss_dssp             --------ECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred             --------EccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecccccccceeccccc
Confidence                    125889999999999999998877654  799999988765 467789999999999999999999999999


Q ss_pred             EEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEE----------eCCCcEEEEECCCCeEEEEecCCCccE
Q psy2671         273 IHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASS----------GKDGAIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       273 i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~----------~~dg~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                      +++|+..+++.. ..+..|...+.+++|.|     ++++|+.+          ..++.+++|++..++... +..|...+
T Consensus       109 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~sp-----dg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~~~~~  181 (360)
T d1k32a3         109 IMTVDLETGKPT-VIERSREAMITDFTISD-----NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTENSHD  181 (360)
T ss_dssp             EEEEETTTCCEE-EEEECSSSCCCCEEECT-----TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE-CSCSSSBE
T ss_pred             ccccccccccee-eeeecccccccchhhcc-----ceeeeeeeccccccceeeccccceeeeccccCceee-eccccccc
Confidence            999999988754 34567777788888876     56777754          345579999998876544 44566778


Q ss_pred             EEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhh
Q psy2671         343 TCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAK  421 (573)
Q Consensus       343 ~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (573)
                      .++.|++++ .|++++.|+.+++|+........   .+...+..+....+...        ..                 
T Consensus       182 ~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~-----------------  233 (360)
T d1k32a3         182 YAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF---EVVSKPFVIPLIPGSPN--------PT-----------------  233 (360)
T ss_dssp             EEEEECTTSCEEEEEESCCCCCEECSSSSCEEC---CSCBEEEEEESSTTCCC--------GG-----------------
T ss_pred             ccccccCCCCEEEEEeCCCceEcccccccceee---ccccceEEEecccCccc--------cc-----------------
Confidence            889999987 68899999999999976543221   11112222222211100        00                 


Q ss_pred             eeeeCCCCcEEEEEeCCC-----eEEEEcCCCCccceeeeccccccEEEEEECC---CCCEEEEeeCCCcEEEEeCCCCe
Q psy2671         422 YQAQCPEGEKLVSGSDDF-----TLFLWNPEKEKKSLARMTGHQQLINCVEFSP---DGRIIASASFDKSIKLWDGRIGK  493 (573)
Q Consensus       422 ~~~~~~~~~~l~sg~~dg-----~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp---~g~~las~s~dg~i~lwd~~~~~  493 (573)
                        ...+++..++++..+.     .+..++...+.  ...+..+...+..+.+.+   ++.++++++.++.+++||..+++
T Consensus       234 --~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~  309 (360)
T d1k32a3         234 --KLVPRSMTSEAGEYDLNDMYKRSSPINVDPGD--YRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK  309 (360)
T ss_dssp             --GCCCGGGSCCCCCCCCTTGGGGCEECSCCCBC--EEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC
T ss_pred             --eECCCcCcccccceeecccccceeecccCcCc--eeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe
Confidence              0112222222222111     12222222221  222333333344444444   34568888999999999998876


Q ss_pred             EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCE
Q psy2671         494 FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEV  547 (573)
Q Consensus       494 ~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v  547 (573)
                      ..    .|...|.+++|||||++|++++.||.|++||+++++....+.-+..++
T Consensus       310 ~~----~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~  359 (360)
T d1k32a3         310 VT----EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL  359 (360)
T ss_dssp             EE----EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred             EE----EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence            42    244568999999999999999999999999999988877776555443

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=6.4e-30  Score=250.09  Aligned_cols=307  Identities=12%  Similarity=0.042  Sum_probs=229.9

Q ss_pred             EEEcC-CCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCC--eEEEEECCCCceeccccc
Q psy2671         213 VKFSP-NGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNG--VIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       213 ~~fsp-~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg--~i~vwd~~~~~~~~~~~~  289 (573)
                      -.||| ||+++|+++ ++.|.+||+.++..+.  .+|...|.+++|+|||++|++++.+.  .|++||.++++..  .+.
T Consensus         8 ~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~--~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~--~~~   82 (360)
T d1k32a3           8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE--KFE   82 (360)
T ss_dssp             EEEEECGGGCEEEEE-TTEEEEECTTSSBEEE--CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE--ECC
T ss_pred             ccccCCCCCEEEEEE-CCeEEEEECCCCcEEE--ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE--Eee
Confidence            45999 999999987 4699999998876654  37999999999999999998877664  7999999988653  466


Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcE-EEEE----------eC
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGL-IYSA----------SQ  358 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~----------s~  358 (573)
                      .|...|.+++|.|     +++++++++.++.+++|+...++....+..|...+.+++|++++. |+.+          ..
T Consensus        83 ~~~~~v~~~~~sp-----dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~  157 (360)
T d1k32a3          83 ENLGNVFAMGVDR-----NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV  157 (360)
T ss_dssp             CCCCSEEEEEECT-----TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred             CCCceEEeeeecc-----cccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeecc
Confidence            8999999999877     678999999999999999999999999999999999999999884 4432          34


Q ss_pred             CCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC
Q psy2671         359 DRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD  438 (573)
Q Consensus       359 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d  438 (573)
                      ++.+++|+..++....... +...+..+++                                     +|+|+.|++++.+
T Consensus       158 ~~~~~v~d~~~~~~~~~~~-~~~~~~~~~~-------------------------------------spdg~~l~~~s~~  199 (360)
T d1k32a3         158 MQAIHVYDMEGRKIFAATT-ENSHDYAPAF-------------------------------------DADSKNLYYLSYR  199 (360)
T ss_dssp             EEEEEEEETTTTEEEECSC-SSSBEEEEEE-------------------------------------CTTSCEEEEEESC
T ss_pred             ccceeeeccccCceeeecc-cccccccccc-------------------------------------cCCCCEEEEEeCC
Confidence            5578999998876544332 3333333333                                     4778999999999


Q ss_pred             CeEEEEcCCCCcc------ceeeeccccccEEEEEECCCCCEEEEeeCCCc-----EEEEeCCCCeEEEeecCCcceEEE
Q psy2671         439 FTLFLWNPEKEKK------SLARMTGHQQLINCVEFSPDGRIIASASFDKS-----IKLWDGRIGKFITTLRGHVQAVYM  507 (573)
Q Consensus       439 g~i~lwd~~~~~~------~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~-----i~lwd~~~~~~~~~~~~h~~~v~~  507 (573)
                      +.+++|+......      ....+..|...+..+.|+|+++.++++..+..     +..++...++. ..+..+...+..
T Consensus       200 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  278 (360)
T d1k32a3         200 SLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILI  278 (360)
T ss_dssp             CCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEE
T ss_pred             CceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCce-eEeeecCCCceE
Confidence            9999999654321      11222334444555667888877776654432     44444444432 233334444555


Q ss_pred             EEECCC---CCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         508 VAWSSD---SRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       508 v~~s~d---g~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      +.+.+.   +.++++++.++.|++||+.+++.    ..|.+.|.+++|||||++|++++.||+|++|+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d  342 (360)
T d1k32a3         279 YSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFP  342 (360)
T ss_dssp             EECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----EEEEEEEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred             EEEEecCCCeeEEEecCCCCEEEEEECCCCeE----EEecCCcCEEEECCCCCEEEEEECCCeEEEEE
Confidence            555544   44788899999999999988754    34556799999999999999999999999996

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=3.4e-29  Score=251.16  Aligned_cols=339  Identities=12%  Similarity=0.059  Sum_probs=223.5

Q ss_pred             eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccCC
Q psy2671         124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM  203 (573)
Q Consensus       124 ~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (573)
                      ++++.+.||+|+|||+.+++.+..                                                       +
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~-------------------------------------------------------l   58 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKV-------------------------------------------------------I   58 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEE-------------------------------------------------------E
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEE-------------------------------------------------------E
Confidence            568889999999999999876532                                                       2


Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeE--E---ecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEE
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLF--K---CEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWD  277 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~--~---~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd  277 (573)
                      ++| ..+..++|||||++|++++.|++|++||+.+++...  .   ..+|...+.+++|+|||++|++ +..++.+++||
T Consensus        59 ~~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d  137 (426)
T d1hzua2          59 DTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD  137 (426)
T ss_dssp             ECC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred             eCC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEc
Confidence            234 358899999999999999999999999999886432  2   2356677788889999998755 45889999999


Q ss_pred             CCCCceecccccCCcccEEEEEeccc------ccCCCCCEEEE-EeCCCcEEEEECCCCeEE-EEecCCCccEEEEEECC
Q psy2671         278 SSTGKQIGQPMRGHKQWITALSWEPF------HLNHQCRRFAS-SGKDGAIRIWDVILSQCV-RVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       278 ~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~~~~~~l~s-~~~dg~v~iwd~~~~~~~-~~~~~h~~~v~~~~~~~  349 (573)
                      ..++..+. ...+|...+....+.+.      ..+.++..++. ....+.+.+++....... .....+...+..+.+++
T Consensus       138 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (426)
T d1hzua2         138 GETLEPKQ-IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDS  216 (426)
T ss_dssp             TTTCCEEE-EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECT
T ss_pred             CCccceeE-EeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECC
Confidence            99886542 22233222211111110      00112233322 233344444444433221 22335667788899988


Q ss_pred             Cc-EEEE-EeCCCeEEEEeCCCCeeeEeccCCc--ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         350 SG-LIYS-ASQDRTIKVWRASDGVMCRTLEGHA--HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       350 ~~-~l~s-~s~d~~i~vw~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      ++ .+++ ...+..+.+++..++..........  .......+...                                  
T Consensus       217 ~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------  262 (426)
T d1hzua2         217 SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHP----------------------------------  262 (426)
T ss_dssp             TSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEET----------------------------------
T ss_pred             CCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecC----------------------------------
Confidence            77 3444 4567788999999887765543221  11111110000                                  


Q ss_pred             CCCCc-EEEEEeCCCeEEEEcCCCC------ccceeeeccccccEEEEEECCCCCEEEE-------eeCCCcEEEEeCCC
Q psy2671         426 CPEGE-KLVSGSDDFTLFLWNPEKE------KKSLARMTGHQQLINCVEFSPDGRIIAS-------ASFDKSIKLWDGRI  491 (573)
Q Consensus       426 ~~~~~-~l~sg~~dg~i~lwd~~~~------~~~~~~~~~h~~~v~~v~~sp~g~~las-------~s~dg~i~lwd~~~  491 (573)
                       ..+. ..++.+.|+.+.+|+....      .+....+.+|...+..++|+|||++|++       ++.|++|+|||+.+
T Consensus       263 -~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t  341 (426)
T d1hzua2         263 -KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKN  341 (426)
T ss_dssp             -TTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTC
T ss_pred             -CCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCC
Confidence             0011 2223345677777765432      1345678899999999999999999994       56789999999998


Q ss_pred             CeEEEee---------cCCcceEEEEEECCCCCEEEEE-----eCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCC
Q psy2671         492 GKFITTL---------RGHVQAVYMVAWSSDSRLLVSG-----SADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGE  557 (573)
Q Consensus       492 ~~~~~~~---------~~h~~~v~~v~~s~dg~~las~-----s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~  557 (573)
                      ++...++         ..|...|..++|||||++++.+     +.|+.|+|||.++.+....+.++.      .++|+|+
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~------~~tp~Gk  415 (426)
T d1hzua2         342 LDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR------LITPTGK  415 (426)
T ss_dssp             TTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT------CCSEEEE
T ss_pred             CCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC------ccCCCce
Confidence            8765443         3456679999999999977432     358889999999999888888764      2467777


Q ss_pred             EEE
Q psy2671         558 KVA  560 (573)
Q Consensus       558 ~l~  560 (573)
                      +-+
T Consensus       416 ~~~  418 (426)
T d1hzua2         416 FNV  418 (426)
T ss_dssp             EEH
T ss_pred             EeE
Confidence            643

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=4.7e-28  Score=242.34  Aligned_cols=340  Identities=13%  Similarity=0.017  Sum_probs=237.2

Q ss_pred             eeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccCC
Q psy2671         124 SLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSM  203 (573)
Q Consensus       124 ~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (573)
                      ++++.+.||+|+|||..+++++..                                                       +
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~-------------------------------------------------------~   58 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTV-------------------------------------------------------L   58 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEE-------------------------------------------------------E
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEE-------------------------------------------------------E
Confidence            458889999999999999876532                                                       2


Q ss_pred             CCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeee--EE---ecCCCCcEEEEEEcCCCCeE-EEEeeCCeEEEEE
Q psy2671         204 PGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPL--FK---CEGHKHWVLCIAWSPDSKQL-VSGCKNGVIHAWD  277 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~--~~---~~~h~~~V~~v~~s~dg~~l-~sgs~dg~i~vwd  277 (573)
                      +.| ..+..++|||||+++++++.|++|++||+.+++..  ..   ..+|.+.+.+.+|+|||++| ++++.++.|++||
T Consensus        59 ~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d  137 (432)
T d1qksa2          59 DTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD  137 (432)
T ss_dssp             ECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred             eCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEe
Confidence            223 35899999999999999999999999999887532  22   33566677778889999986 6788899999999


Q ss_pred             CCCCceecccccC-----------CcccEEEEEecccccCCCCCE-EEEEeCCCcEEEEECCCCeEEEEec-CCCccEEE
Q psy2671         278 SSTGKQIGQPMRG-----------HKQWITALSWEPFHLNHQCRR-FASSGKDGAIRIWDVILSQCVRVLT-SHTRSVTC  344 (573)
Q Consensus       278 ~~~~~~~~~~~~~-----------h~~~v~~~~~~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~-~h~~~v~~  344 (573)
                      ..+++.+.. ..+           +.....++.+.|     ++.. +++.+.++.|.+||....+...... .+...+.+
T Consensus       138 ~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~s~-----dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~  211 (432)
T d1qksa2         138 GETLEPKKI-QSTRGMTYDEQEYHPEPRVAAILASH-----YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHD  211 (432)
T ss_dssp             TTTCCEEEE-EECCEECTTTCCEESCCCEEEEEECS-----SSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEE
T ss_pred             Cccccceee-eccCCccccceeccCCCceeEEEECC-----CCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCcccc
Confidence            998876532 112           223344455443     4544 4667778999999998776554433 34566889


Q ss_pred             EEECCCc-EEEEEe-CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         345 IRWGGSG-LIYSAS-QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       345 ~~~~~~~-~l~s~s-~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      +++++++ .+++++ .++.+.+++..++.....+.......     .....                           ..
T Consensus       212 ~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~-----~~~~~---------------------------~~  259 (432)
T d1qksa2         212 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-----HPGRG---------------------------AN  259 (432)
T ss_dssp             EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-----CCTTC---------------------------EE
T ss_pred             ceECCCCCEEEEeccccceEEEeecccceEEEEeccCcccc-----ccCcc---------------------------cc
Confidence            9999998 455554 56788999988876654432111000     00000                           00


Q ss_pred             eeeCCCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         423 QAQCPEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       423 ~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      ......+...++.. .++.+.+|+.....     ...|...+....++|++..+++++.+.+.++|+..+.      ..|
T Consensus       260 ~~~~~~g~~~~~~~lg~~~v~~~~~~~~~-----~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~------~~~  328 (432)
T d1qksa2         260 FVHPTFGPVWATSHMGDDSVALIGTDPEG-----HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATL------NPE  328 (432)
T ss_dssp             EEETTTEEEEEEEBSSSSEEEEEECCTTT-----CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTT------CSS
T ss_pred             eecCCCCceecccccCCceEEeccccccc-----ccccccEEEEEEEcCCCCeEEEEecCCccceeecccC------CCC
Confidence            00011222333332 47889999865432     2456667889999999999999999999999976543      234


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEee-----CCCcEEEcc
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGG-----KDKVLRLWQ  572 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~-----~d~~i~iw~  572 (573)
                      ......+++ ||++.|++++.|+++++|++.++.   .+..|...|.+++|||||++|+.+.     .++.|+||+
T Consensus       329 ~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D  400 (432)
T d1qksa2         329 AEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD  400 (432)
T ss_dssp             HHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred             CCeeeEEEE-EechhhcccccCCceEeccccccc---ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEE
Confidence            433445555 999999999999999999986553   3446777899999999999885543     467899987

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=2e-27  Score=237.73  Aligned_cols=334  Identities=13%  Similarity=0.053  Sum_probs=234.2

Q ss_pred             ccccCCCccccEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         102 CTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       102 ~~~~~~gH~~~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      +...++.|. .+..++|||||+++++++.|++|++||+.++++....                                 
T Consensus        54 v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~---------------------------------   99 (432)
T d1qksa2          54 IKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA---------------------------------   99 (432)
T ss_dssp             EEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE---------------------------------
T ss_pred             EEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEE---------------------------------
Confidence            444555563 6999999999999999999999999999877532110                                 


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCC-----------C
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGH-----------K  249 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h-----------~  249 (573)
                                +       .....+|.+.+.+..|||||++| ++++.+++|++||..+++++.....|           .
T Consensus       100 ----------~-------i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~  162 (432)
T d1qksa2         100 ----------E-------IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE  162 (432)
T ss_dssp             ----------E-------EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESC
T ss_pred             ----------E-------EecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCC
Confidence                      0       01123566778888899999986 77888999999999999887765543           3


Q ss_pred             CcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECC
Q psy2671         250 HWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVI  327 (573)
Q Consensus       250 ~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~  327 (573)
                      .....+.++|+|.+++ +...++.|.+||..+++......-.+...+..+.+.|     +++++++++ .++.+.++|..
T Consensus       163 ~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~sp-----dg~~~~va~~~~~~v~v~d~~  237 (432)
T d1qksa2         163 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG-----SHRYFITAANARNKLVVIDTK  237 (432)
T ss_dssp             CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT-----TSCEEEEEEGGGTEEEEEETT
T ss_pred             CceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECC-----CCCEEEEeccccceEEEeecc
Confidence            4467889999998764 5666799999999877643222223445567777665     677666555 45678899998


Q ss_pred             CCeEEEEecC-----CCccEEEEEECCCcEEEEEe--CCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcC
Q psy2671         328 LSQCVRVLTS-----HTRSVTCIRWGGSGLIYSAS--QDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       328 ~~~~~~~~~~-----h~~~v~~~~~~~~~~l~s~s--~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      ..+.+..+..     |........+...+......  .++.+.+|+.....    ...|...+....+            
T Consensus       238 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~----~~~~~~~v~~~~~------------  301 (432)
T d1qksa2         238 EGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEG----HPDNAWKILDSFP------------  301 (432)
T ss_dssp             TTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTT----CTTTBTSEEEEEE------------
T ss_pred             cceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccccccc----ccccccEEEEEEE------------
Confidence            8877765432     33344444555555433333  47888888765432    2233333333322            


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeC
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASF  480 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~  480 (573)
                                               .+++..+++++.+.+.++|+....       ..|.....++++ ||++.+++++.
T Consensus       302 -------------------------~~~g~~~~~~s~p~~~~lw~~~~~-------~~~~~~~~sv~v-pDg~~la~~s~  348 (432)
T d1qksa2         302 -------------------------ALGGGSLFIKTHPNSQYLYVDATL-------NPEAEISGSVAV-FDIKAMTGDGS  348 (432)
T ss_dssp             -------------------------CSCSCCCCEECCTTCSEEEEECTT-------CSSHHHHTCEEE-EEGGGCCCSSS
T ss_pred             -------------------------cCCCCeEEEEecCCccceeecccC-------CCCCCeeeEEEE-Eechhhccccc
Confidence                                     255677888999999999975432       223333445665 99999999999


Q ss_pred             CCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEe-----CCCcEEEEeCCcccccccccCc
Q psy2671         481 DKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGS-----ADSTLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       481 dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s-----~D~~v~vwd~~~~~~~~~l~~h  543 (573)
                      |+.+++||..++.   .+..|...+.+++|||||++++.+.     .++.|+|||.++.++...+.+.
T Consensus       349 d~~~k~w~~~~~~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~~  413 (432)
T d1qksa2         349 DPEFKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE  413 (432)
T ss_dssp             CCCEEEECHHHHH---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred             CCceEeccccccc---ccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecCC
Confidence            9999999975543   2335667899999999999886553     4688999999999987777653

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=2.1e-25  Score=223.33  Aligned_cols=321  Identities=11%  Similarity=-0.010  Sum_probs=208.6

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceec----ccccCCcccEE
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIG----QPMRGHKQWIT  296 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~----~~~~~h~~~v~  296 (573)
                      ++++++.|++|+|||+.+++.+.++..|. .+..++|||||++|++++.|++|++||+.+++...    ....+|...+.
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~  112 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVES  112 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEE
Confidence            45788899999999999999999998875 58999999999999999999999999999886432    11234444444


Q ss_pred             EEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeee
Q psy2671         297 ALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMC  373 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~  373 (573)
                      ++.|     +++++++ +++..++++++||...+.+...+..|...+....+.+++  ..+..+.|+...++.......+
T Consensus       113 s~~~-----spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i  187 (426)
T d1hzua2         113 SKFK-----GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV  187 (426)
T ss_dssp             CCST-----TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             eeee-----cCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeE
Confidence            4444     3467775 555689999999999999988888777666555554433  4556666666655544332221


Q ss_pred             EeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe-CCCeEEEEcCCCCccc
Q psy2671         374 RTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS-DDFTLFLWNPEKEKKS  452 (573)
Q Consensus       374 ~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~-~dg~i~lwd~~~~~~~  452 (573)
                      .....+......+...+.        ..                 ........|++.++.++. .+..+.+++..+....
T Consensus       188 ~~~~~~~~~~~~~~~~~~--------~~-----------------~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~  242 (426)
T d1hzua2         188 LLVNYKDIDNLTVTSIGA--------AP-----------------FLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS  242 (426)
T ss_dssp             EEEECSSSSSCEEEEEEC--------CS-----------------SEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEE
T ss_pred             EEEEeccccceeeEEecc--------CC-----------------ccEeeeECCCCcEEEeeeecccceeeeecccccEE
Confidence            111111110000000000        00                 001112346677666655 5567888887765432


Q ss_pred             eeee-ccccccEEEEEECCCCC--E-EEEeeCCCcEEEEeCCC-------CeEEEeecCCcceEEEEEECCCCCEEEE--
Q psy2671         453 LARM-TGHQQLINCVEFSPDGR--I-IASASFDKSIKLWDGRI-------GKFITTLRGHVQAVYMVAWSSDSRLLVS--  519 (573)
Q Consensus       453 ~~~~-~~h~~~v~~v~~sp~g~--~-las~s~dg~i~lwd~~~-------~~~~~~~~~h~~~v~~v~~s~dg~~las--  519 (573)
                      .... ..+........+.+.+.  . .++.+.|+.+.+|+...       ++...++.+|...+..++|+||+++|++  
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~  322 (426)
T d1hzua2         243 ALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT  322 (426)
T ss_dssp             EEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECC
T ss_pred             EEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEee
Confidence            2111 11111122233332222  1 22334566777776443       4678889999999999999999999994  


Q ss_pred             -----EeCCCcEEEEeCCccccccc---------ccCcCCCEEEEEEccCCCEEE-Ee----eCCCcEEEcc
Q psy2671         520 -----GSADSTLKVWNMKTKKIEQD---------LPGHGDEVYAVDWAPDGEKVA-SG----GKDKVLRLWQ  572 (573)
Q Consensus       520 -----~s~D~~v~vwd~~~~~~~~~---------l~~h~~~v~~~~~s~d~~~l~-s~----~~d~~i~iw~  572 (573)
                           ++.|++|+|||+++++....         +..|...|.+++|||||++++ ++    +.|+.|+||+
T Consensus       323 ~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D  394 (426)
T d1hzua2         323 TFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD  394 (426)
T ss_dssp             TTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEE
T ss_pred             cCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEE
Confidence                 55688999999998876543         345667899999999999774 43    4678899997

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.93  E-value=1e-24  Score=210.40  Aligned_cols=310  Identities=12%  Similarity=0.093  Sum_probs=210.3

Q ss_pred             CeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccC
Q psy2671         123 RSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSS  202 (573)
Q Consensus       123 ~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (573)
                      ++++|++.|++|+|||+++++.+..+.                                                     
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~-----------------------------------------------------   28 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVIT-----------------------------------------------------   28 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEE-----------------------------------------------------
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEE-----------------------------------------------------
Confidence            589999999999999999876543211                                                     


Q ss_pred             CCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCC-----cEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy2671         203 MPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKH-----WVLCIAWSPDSKQLVSGCKNGVIHAW  276 (573)
Q Consensus       203 ~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~-----~V~~v~~s~dg~~l~sgs~dg~i~vw  276 (573)
                      ...+...+.+++|+|||+++ ++++.++.|.+||+.+++.+.....+..     .+..++|+||+++++++..+.....|
T Consensus        29 ~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~  108 (337)
T d1pbyb_          29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELT  108 (337)
T ss_dssp             CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSS
T ss_pred             CCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceee
Confidence            12344556789999999987 5667899999999999998877765533     24578999999999988765443322


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYS  355 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s  355 (573)
                      .                                    ....+..+.+||..+++....+..+ ..+.++++++++ .+++
T Consensus       109 ~------------------------------------~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~  151 (337)
T d1pbyb_         109 H------------------------------------FEVQPTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYG  151 (337)
T ss_dssp             C------------------------------------EEECCCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEE
T ss_pred             e------------------------------------ccccccceeeccccCCeEEEecccc-CCceEEEEcCCCCEEEE
Confidence            1                                    1234567788898888877776644 457788898887 5666


Q ss_pred             EeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEE
Q psy2671         356 ASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSG  435 (573)
Q Consensus       356 ~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg  435 (573)
                      ++.  .+.+||..++.....+..+..... ..+.++...           ..+.....  ...................+
T Consensus       152 ~~~--~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  215 (337)
T d1pbyb_         152 LGR--DLHVMDPEAGTLVEDKPIQSWEAE-TYAQPDVLA-----------VWNQHESS--GVMATPFYTARKDIDPADPT  215 (337)
T ss_dssp             ESS--SEEEEETTTTEEEEEECSTTTTTT-TBCCCBCCC-----------CCCCCTTT--TEEEEEEEEEBTTSCTTSGG
T ss_pred             EcC--CcceeeeecCcEEEEeecCCcccc-ceecCCcce-----------eecccccc--ceeeeeeeeeeeccceeeec
Confidence            654  467899988877766544322110 000000000           00000000  00000000000111111223


Q ss_pred             eCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCC
Q psy2671         436 SDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSR  515 (573)
Q Consensus       436 ~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~  515 (573)
                      ..++.+.+|+..+..........+...+..++++|++.+++.+  ++.+++||+.+++.+..+. +...+.+++|+|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~  292 (337)
T d1pbyb_         216 AYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGS  292 (337)
T ss_dssp             GEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSC
T ss_pred             ccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCC
Confidence            3455688898887765555566677788899999999998766  5899999999999888875 445678999999999


Q ss_pred             EEEEEeCCCcEEEEeCCccccccccc
Q psy2671         516 LLVSGSADSTLKVWNMKTKKIEQDLP  541 (573)
Q Consensus       516 ~las~s~D~~v~vwd~~~~~~~~~l~  541 (573)
                      +|++++.|+.|++||.++.+.+..++
T Consensus       293 ~l~v~~~~~~i~v~D~~t~~~v~~i~  318 (337)
T d1pbyb_         293 TVWLGGALGDLAAYDAETLEKKGQVD  318 (337)
T ss_dssp             EEEEESBSSEEEEEETTTCCEEEEEE
T ss_pred             EEEEEeCCCcEEEEECCCCcEEEEEE
Confidence            99999999999999999988876654

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.91  E-value=8.5e-24  Score=204.73  Aligned_cols=311  Identities=14%  Similarity=0.074  Sum_probs=209.0

Q ss_pred             EEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccC
Q psy2671         213 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRG  290 (573)
Q Consensus       213 ~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~  290 (573)
                      ++|++++++|++++.|++|.+||+.+++.+.++. .|...+.+++|+|||++++ +++.++.|.+||+.+++.+......
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~   81 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS   81 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence            4689999999999999999999999999988876 4556678999999999875 5567899999999998765432211


Q ss_pred             C-----cccEEEEEecccccCCCCCEEEEEe------------CCCcEEEEECCCCeEEEEecCC--CccEEEEEECCCc
Q psy2671         291 H-----KQWITALSWEPFHLNHQCRRFASSG------------KDGAIRIWDVILSQCVRVLTSH--TRSVTCIRWGGSG  351 (573)
Q Consensus       291 h-----~~~v~~~~~~~~~~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~h--~~~v~~~~~~~~~  351 (573)
                      .     ...+..+.|     +++++++..++            .++.+.+|+..+++....+..+  ...+..+.+++++
T Consensus        82 ~~~~~~~~~~~~v~~-----s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1jmxb_          82 SVPGEVGRSMYSFAI-----SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG  156 (346)
T ss_dssp             CSTTEEEECSSCEEE-----CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred             ccccccCCceEEEEE-----ecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCC
Confidence            1     112233444     34667665543            4777888988776544433222  2334556667777


Q ss_pred             EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcE
Q psy2671         352 LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEK  431 (573)
Q Consensus       352 ~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (573)
                      .++..+  +.+.+|+..++.....+..+.. ...+.++++.............           ...........+....
T Consensus       157 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~  222 (346)
T d1jmxb_         157 SLYVAG--PDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHE-----------FSMLYTIARFKDDKQD  222 (346)
T ss_dssp             CEEEES--SSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCE-----------EEEEEEEEEC------
T ss_pred             EEEEeC--CcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCc-----------eEeeeeeeeeccCcee
Confidence            666654  4588999988887776654432 1112222221100000000000           0000000001122334


Q ss_pred             EEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC
Q psy2671         432 LVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS  511 (573)
Q Consensus       432 l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s  511 (573)
                      ++++..++.+.+|+..+.........+|...+..+.+++++..++.+.. +.|++||..+++.+..+. +...+.+++||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~~~~va~s  300 (346)
T d1jmxb_         223 PATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHTYYCVAFD  300 (346)
T ss_dssp             -CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSCCCEEEEC
T ss_pred             EeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc-CCCCEEEEEEc
Confidence            5566667789999998877666667778888999999999888887764 579999999999888775 33468899999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCcccccccccCcC
Q psy2671         512 SDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHG  544 (573)
Q Consensus       512 ~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~  544 (573)
                      |||++|++++.|+.|++||+++++.+..++.+.
T Consensus       301 ~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~  333 (346)
T d1jmxb_         301 KKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG  333 (346)
T ss_dssp             SSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred             CCCCEEEEEeCCCcEEEEECccCCEEEEEECCC
Confidence            999999999999999999999999887776443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.91  E-value=8.3e-21  Score=179.64  Aligned_cols=269  Identities=13%  Similarity=0.177  Sum_probs=198.4

Q ss_pred             EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCCcccEEEEEec
Q psy2671         223 ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWE  301 (573)
Q Consensus       223 as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~  301 (573)
                      ++++.|++|.+||+.+++.+.++... .....++|+|||++|+ +++.++.|++||+.+++.+.. +..+. .+..+.|.
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~-~~~~~-~~~~~~~~   82 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT-VPAGS-SPQGVAVS   82 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE-EECSS-SEEEEEEC
T ss_pred             EEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeee-eeccc-cccccccc
Confidence            56778999999999999988877654 3468999999999885 667889999999999876543 33343 34666665


Q ss_pred             ccccCCCCC-EEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccC
Q psy2671         302 PFHLNHQCR-RFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEG  378 (573)
Q Consensus       302 ~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~  378 (573)
                      +     ++. .++++..++.+++|+...++....+..+. ...++.+++++  .++++..++.+.+|+..++.....+..
T Consensus        83 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (301)
T d1l0qa2          83 P-----DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV  156 (301)
T ss_dssp             T-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             c-----ccccccccccccceeeecccccceeeeeccccc-cceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc
Confidence            4     344 45666778899999999998888776554 56778888776  355677789999999998887766554


Q ss_pred             CcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC-CeEEEEcCCCCccceeeec
Q psy2671         379 HAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD-FTLFLWNPEKEKKSLARMT  457 (573)
Q Consensus       379 ~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-g~i~lwd~~~~~~~~~~~~  457 (573)
                      +.. ...+++                                     .|++..++++..+ +.+.+|+..... ......
T Consensus       157 ~~~-~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  197 (301)
T d1l0qa2         157 GRS-PKGIAV-------------------------------------TPDGTKVYVANFDSMSISVIDTVTNS-VIDTVK  197 (301)
T ss_dssp             CSS-EEEEEE-------------------------------------CTTSSEEEEEETTTTEEEEEETTTTE-EEEEEE
T ss_pred             CCC-ceEEEe-------------------------------------eccccceeeeccccccccccccccee-eeeccc
Confidence            332 222222                                     3556666666654 566777755432 222232


Q ss_pred             cccccEEEEEECCCCCEEEEee---CCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEE-EEEeCCCcEEEEeCCc
Q psy2671         458 GHQQLINCVEFSPDGRIIASAS---FDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLL-VSGSADSTLKVWNMKT  533 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~s---~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~l-as~s~D~~v~vwd~~~  533 (573)
                       ....+..++|+++++.++.++   .++.|++||..+++.+..+..+ ..+..++|||||++| ++++.|++|++||+++
T Consensus       198 -~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t  275 (301)
T d1l0qa2         198 -VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT  275 (301)
T ss_dssp             -CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             -ccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCC
Confidence             234577899999999887654   3468999999999988887654 457899999999986 5777899999999999


Q ss_pred             cccccccc
Q psy2671         534 KKIEQDLP  541 (573)
Q Consensus       534 ~~~~~~l~  541 (573)
                      ++.+..++
T Consensus       276 ~~~~~~~~  283 (301)
T d1l0qa2         276 NTITATMA  283 (301)
T ss_dssp             TEEEEEEE
T ss_pred             CeEEEEEe
Confidence            98877664

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.90  E-value=9.4e-21  Score=185.53  Aligned_cols=322  Identities=12%  Similarity=-0.007  Sum_probs=218.6

Q ss_pred             CCccccEEEEEEcCCCCeeEEe-----eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceE
Q psy2671         107 PGHAEAVISVKFSPNGRSLASG-----SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVV  181 (573)
Q Consensus       107 ~gH~~~V~~l~~s~~~~~lat~-----s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (573)
                      .+|..++.+++++|||+.++..     +.++.|.+||.++++.+.+                                  
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~----------------------------------   62 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH----------------------------------   62 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEE----------------------------------
Confidence            4688999999999999988654     3456799999988865432                                  


Q ss_pred             EEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCCCCc
Q psy2671         182 DIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGHKHW  251 (573)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h~~~  251 (573)
                                           +.++..  ..++|||||++|++++          .++.|.+||..+++.+.....+...
T Consensus        63 ---------------------~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~  119 (373)
T d2madh_          63 ---------------------VNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAP  119 (373)
T ss_pred             ---------------------EeCCCC--ccEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcc
Confidence                                 112222  2688999999998875          4578999999999988777665544


Q ss_pred             E-------EEEEEcCCCCeEEEEee--CCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEE
Q psy2671         252 V-------LCIAWSPDSKQLVSGCK--NGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIR  322 (573)
Q Consensus       252 V-------~~v~~s~dg~~l~sgs~--dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~  322 (573)
                      .       ..+.|++|++.++....  ++.+.+|+...++...     +.....++.+.|.    ....+++.+.|+.+.
T Consensus       120 ~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~----g~~~~v~~~~dg~~~  190 (373)
T d2madh_         120 RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQ-----LLSSPTCYHIHPG----APSTFYLLCAQGGLA  190 (373)
T ss_pred             eeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEE-----EeccceeEEEecC----CCcEEEEEcCCCeEE
Confidence            3       45788999997766554  5678899887765432     2223344555442    224568889999999


Q ss_pred             EEECCCCeEEEEecCC------CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEe--ccCCcceeeEEEeccCcee
Q psy2671         323 IWDVILSQCVRVLTSH------TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRT--LEGHAHWVNTLALSTDYLM  394 (573)
Q Consensus       323 iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~  394 (573)
                      +|+............+      ........+.+++.++..+.++.+.+|+...+.....  ...+........       
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  263 (373)
T d2madh_         191 KTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADT-------  263 (373)
T ss_pred             EEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeee-------
Confidence            9999887766554322      2223445566777778888999999998876543211  111111000000       


Q ss_pred             EEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCE
Q psy2671         395 RVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRI  474 (573)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~  474 (573)
                                                    ..|.....+..+.|+.                       ....+.+++..
T Consensus       264 ------------------------------~~~~~~~~~~~~~d~~-----------------------~~~~~~~~~~~  290 (373)
T d2madh_         264 ------------------------------WRPGGWQQVAYLKSSD-----------------------GIYLLTSEQSA  290 (373)
T ss_pred             ------------------------------eccCcceeeEEecCCC-----------------------eEEEecCCCce
Confidence                                          0011122222222221                       11233445667


Q ss_pred             EEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE--EEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEE
Q psy2671         475 IASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL--LVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDW  552 (573)
Q Consensus       475 las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~--las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~  552 (573)
                      +++...++.+.+||..+++.+..+. +...+..++|||||+.  +++++.|++|++||+.+++.++.+.++......++.
T Consensus       291 ~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~  369 (373)
T d2madh_         291 WKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV  369 (373)
T ss_pred             EEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEE
Confidence            7788888999999999999888775 4467889999999984  578899999999999999999999888777777776


Q ss_pred             ccC
Q psy2671         553 APD  555 (573)
Q Consensus       553 s~d  555 (573)
                      -++
T Consensus       370 ~~~  372 (373)
T d2madh_         370 MNE  372 (373)
T ss_pred             ecC
Confidence            543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.89  E-value=5.2e-20  Score=174.05  Aligned_cols=243  Identities=17%  Similarity=0.248  Sum_probs=174.5

Q ss_pred             CcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEE-EeeCCeEEEEECCCCceec
Q psy2671         208 EAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVS-GCKNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       208 ~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~s-gs~dg~i~vwd~~~~~~~~  285 (573)
                      ..+..++|+|||++| ++++.++.|++||+.+++.+..+..+.. +..++|++++.++++ +..++.+.+|+..+++...
T Consensus        32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (301)
T d1l0qa2          32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG  110 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-ccccccccccccccccccccceeeecccccceeee
Confidence            346789999999987 4667889999999999999888877764 688999999987654 5567899999998886543


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEE-EEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCc-EEEEEeC-CCeE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRF-ASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSG-LIYSASQ-DRTI  362 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~-d~~i  362 (573)
                      . +. +......+.+.|     +++.+ +++..++.+.+|+..+......+..+. .+.++.+.+++ .+++++. ++.+
T Consensus       111 ~-~~-~~~~~~~~~~~~-----dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  182 (301)
T d1l0qa2         111 T-VK-TGKSPLGLALSP-----DGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSI  182 (301)
T ss_dssp             E-EE-CSSSEEEEEECT-----TSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred             e-cc-ccccceEEEeec-----CCCeeeeeeccccceeeeeccccceeeecccCC-CceEEEeeccccceeeeccccccc
Confidence            2 22 233456666655     45554 566678899999999998887776554 46778888765 5555554 5677


Q ss_pred             EEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEe---CCC
Q psy2671         363 KVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGS---DDF  439 (573)
Q Consensus       363 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~---~dg  439 (573)
                      .+|+............+.. ...+++                                     .+++..++.+.   .++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~-~~~~~~-------------------------------------~~~g~~~~v~~~~~~~~  224 (301)
T d1l0qa2         183 SVIDTVTNSVIDTVKVEAA-PSGIAV-------------------------------------NPEGTKAYVTNVDKYFN  224 (301)
T ss_dssp             EEEETTTTEEEEEEECSSE-EEEEEE-------------------------------------CTTSSEEEEEEECSSCC
T ss_pred             ccccccceeeeecccccCC-cceeec-------------------------------------cccccccccccccceee
Confidence            7888776665554443322 222222                                     24555554443   347


Q ss_pred             eEEEEcCCCCccceeeeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCCCCeEEEeec
Q psy2671         440 TLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGRIGKFITTLR  499 (573)
Q Consensus       440 ~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~~~~~~~~~  499 (573)
                      +|++||+.+.+. ...+.. ...+.+++|+|||++| ++++.|++|++||+.+++.+.++.
T Consensus       225 ~v~v~D~~t~~~-~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~  283 (301)
T d1l0qa2         225 TVSMIDTGTNKI-TARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA  283 (301)
T ss_dssp             EEEEEETTTTEE-EEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             eeeeeecCCCeE-EEEEcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence            899999987643 333333 3458999999999976 577789999999999999888775

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.87  E-value=7.3e-21  Score=183.75  Aligned_cols=282  Identities=11%  Similarity=0.056  Sum_probs=178.8

Q ss_pred             EEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEee
Q psy2671         116 VKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRP  195 (573)
Q Consensus       116 l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (573)
                      ++|++++++|++++.|++|.|||+.+++.+.++.                                              
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~----------------------------------------------   35 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV----------------------------------------------   35 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEE----------------------------------------------
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEE----------------------------------------------
Confidence            4789999999999999999999999887653221                                              


Q ss_pred             ccccccCCCCCCCcEEEEEEcCCCCeE-EEEeCCCeEEEEECCCCeeeEEecCCC------CcEEEEEEcCCCCeEEEEe
Q psy2671         196 VTRCTSSMPGHAEAVISVKFSPNGRSL-ASGSGDTTVRFWDVTTQTPLFKCEGHK------HWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       196 ~~~~~~~~~gh~~~V~~~~fsp~g~~l-as~s~d~~i~iwd~~~~~~~~~~~~h~------~~V~~v~~s~dg~~l~sgs  268 (573)
                              ..|...+.+++|+|||+++ ++++.++.|.+||+.+++.+.......      ..+..++|+|||+++++++
T Consensus        36 --------~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~  107 (346)
T d1jmxb_          36 --------MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV  107 (346)
T ss_dssp             --------CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred             --------cCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEe
Confidence                    0234456789999999987 555678999999999998876654322      2345789999999998775


Q ss_pred             e------------CCeEEEEECCCCceecccccCC--cccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy2671         269 K------------NGVIHAWDSSTGKQIGQPMRGH--KQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV  334 (573)
Q Consensus       269 ~------------dg~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  334 (573)
                      .            ++.+.+|+..+++.... +..+  ...+..+.+     +.+++.++ .  ++.+.+|+..+++....
T Consensus       108 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~-~--~~~~~~~~~~~~~~~~~  178 (346)
T d1jmxb_         108 NPTQRLNDHYVVKPPRLEVFSTADGLEAKP-VRTFPMPRQVYLMRA-----ADDGSLYV-A--GPDIYKMDVKTGKYTVA  178 (346)
T ss_dssp             EEEEECSSCEEECCCEEEEEEGGGGGGBCC-SEEEECCSSCCCEEE-----CTTSCEEE-E--SSSEEEECTTTCCEEEE
T ss_pred             cCCcceeeeeccCcceEEEEecccceeeeE-EEeeeccCceEEEEe-----cCCCEEEE-e--CCcceEEEccCCCEEEE
Confidence            3            67788898877654321 1111  111122222     12333333 3  34588999988887777


Q ss_pred             ecCCCccEEEEEECCCc---------------------------EEEEEeCCCeEEEEeCCCCeeeEe-ccCCcceeeEE
Q psy2671         335 LTSHTRSVTCIRWGGSG---------------------------LIYSASQDRTIKVWRASDGVMCRT-LEGHAHWVNTL  386 (573)
Q Consensus       335 ~~~h~~~v~~~~~~~~~---------------------------~l~s~s~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~  386 (573)
                      +..+.. ...+.+++++                           .+.++..+..+.+|+..++..... ...|...+...
T Consensus       179 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (346)
T d1jmxb_         179 LPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG  257 (346)
T ss_dssp             ECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEE
T ss_pred             EecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEE
Confidence            654432 1122222222                           112223334445555444432211 11222222111


Q ss_pred             EeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEE
Q psy2671         387 ALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCV  466 (573)
Q Consensus       387 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v  466 (573)
                      .                                     ..+++..++.+. ++.+++||..+.+......  +...+.++
T Consensus       258 ~-------------------------------------~~~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~--~~~~~~~v  297 (346)
T d1jmxb_         258 L-------------------------------------RSPKDPNQIYGV-LNRLAKYDLKQRKLIKAAN--LDHTYYCV  297 (346)
T ss_dssp             E-------------------------------------ECSSCTTEEEEE-ESEEEEEETTTTEEEEEEE--CSSCCCEE
T ss_pred             E-------------------------------------EeCCCCEEEEec-CCeEEEEECCCCcEEEEEc--CCCCEEEE
Confidence            1                                     224455555554 4579999988765432222  33458899


Q ss_pred             EECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         467 EFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       467 ~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      +|||||++|++++.|+.|++||.++++.+.+++-+
T Consensus       298 a~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p  332 (346)
T d1jmxb_         298 AFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  332 (346)
T ss_dssp             EECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             EEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECC
Confidence            99999999999999999999999999999887644

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.86  E-value=3.1e-20  Score=178.54  Aligned_cols=274  Identities=13%  Similarity=0.097  Sum_probs=181.1

Q ss_pred             CeEEEEeCCCeEEEEECCCCeeeEEecC--CCCcEEEEEEcCCCCeEE-EEeeCCeEEEEECCCCceecccccCCccc--
Q psy2671         220 RSLASGSGDTTVRFWDVTTQTPLFKCEG--HKHWVLCIAWSPDSKQLV-SGCKNGVIHAWDSSTGKQIGQPMRGHKQW--  294 (573)
Q Consensus       220 ~~las~s~d~~i~iwd~~~~~~~~~~~~--h~~~V~~v~~s~dg~~l~-sgs~dg~i~vwd~~~~~~~~~~~~~h~~~--  294 (573)
                      +++++++.|++|++||+.+++.+..+..  +...+.+++|+|||++++ +++.++.|.+||+.+++.+.. ...+...  
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~-~~~~~~~~~   80 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR-IDLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE-EECCBTTEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEE-EecCCCccc
Confidence            4799999999999999999998887754  345578999999999874 667899999999999876532 2222211  


Q ss_pred             ---EEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCe
Q psy2671         295 ---ITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGV  371 (573)
Q Consensus       295 ---v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~  371 (573)
                         +..+.|     ++++++++.++.+.....                             ......+..+.+||..++.
T Consensus        81 ~~~~~~v~~-----s~dg~~l~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~d~~~~~  126 (337)
T d1pbyb_          81 VKSLFGAAL-----SPDGKTLAIYESPVRLEL-----------------------------THFEVQPTRVALYDAETLS  126 (337)
T ss_dssp             EECTTCEEE-----CTTSSEEEEEEEEEEECS-----------------------------SCEEECCCEEEEEETTTTE
T ss_pred             ccceeeEEE-----cCCCcEEEEeecCCccee-----------------------------eeccccccceeeccccCCe
Confidence               122333     234455554433222111                             1123456788899988887


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCcc
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKK  451 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~  451 (573)
                      ....+..+. .+..++++                                     |+|.++++++.+  +.+||..+...
T Consensus       127 ~~~~~~~~~-~~~~~~~s-------------------------------------~dg~~l~~~~~~--~~~~d~~~~~~  166 (337)
T d1pbyb_         127 RRKAFEAPR-QITMLAWA-------------------------------------RDGSKLYGLGRD--LHVMDPEAGTL  166 (337)
T ss_dssp             EEEEEECCS-SCCCEEEC-------------------------------------TTSSCEEEESSS--EEEEETTTTEE
T ss_pred             EEEeccccC-CceEEEEc-------------------------------------CCCCEEEEEcCC--cceeeeecCcE
Confidence            766654332 23333333                                     567777776544  55677655432


Q ss_pred             ceeeecccc-----------------------ccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEe-ecCCcceEEE
Q psy2671         452 SLARMTGHQ-----------------------QLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITT-LRGHVQAVYM  507 (573)
Q Consensus       452 ~~~~~~~h~-----------------------~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~-~~~h~~~v~~  507 (573)
                      . ..+..+.                       ..........+......++.++.+.+||..+++.... +..+...+..
T Consensus       167 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (337)
T d1pbyb_         167 V-EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFS  245 (337)
T ss_dssp             E-EEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEE
T ss_pred             E-EEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEE
Confidence            1 1111100                       0011111122222233344456799999988875543 4456677888


Q ss_pred             EEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         508 VAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       508 v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ++++|++.+++++  ++.|++||+.+++.+..+. +...+.+++|+|||++|++++.|+.|++|+
T Consensus       246 ~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D  307 (337)
T d1pbyb_         246 TAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYD  307 (337)
T ss_dssp             EEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred             EEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence            9999999998766  5789999999999887765 556789999999999999999999999997

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.82  E-value=2.3e-17  Score=161.08  Aligned_cols=307  Identities=11%  Similarity=0.004  Sum_probs=196.9

Q ss_pred             CCCCCcEEEEEEcCCCCeEEEE-----eCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------
Q psy2671         204 PGHAEAVISVKFSPNGRSLASG-----SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------  268 (573)
Q Consensus       204 ~gh~~~V~~~~fsp~g~~las~-----s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------  268 (573)
                      .+|..++.+++++|||+.++..     +.++.|.+||..+++.+.++..+...  .++|+|||++|++++          
T Consensus        17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~   94 (373)
T d2madh_          17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGK   94 (373)
T ss_pred             ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCcccccc
Confidence            4678899999999999998764     24467999999999998888766543  789999999998875          


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEeccc--ccCCCCCEEEE--EeCCCcEEEEECCCCeEEEEecCCCccEEE
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPF--HLNHQCRRFAS--SGKDGAIRIWDVILSQCVRVLTSHTRSVTC  344 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~  344 (573)
                      .++.|.+||..+++.+.. ...+..........|.  .++.+++.+..  ...++.+.+|+....+.....    ....+
T Consensus        95 ~~~~v~v~D~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  169 (373)
T d2madh_          95 RTDYVEVFDPVTFLPIAD-IELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTC  169 (373)
T ss_pred             cceEEEEEECCCCcEEEE-EecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEe----cccee
Confidence            457899999999876533 2233332222222221  12234444433  344567888887766544333    33556


Q ss_pred             EEECCCc--EEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         345 IRWGGSG--LIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       345 ~~~~~~~--~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      +.+++++  .+++.+.|+++.+|+...+........+........                               ....
T Consensus       170 ~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~  218 (373)
T d2madh_         170 YHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNL-------------------------------LTQP  218 (373)
T ss_pred             EEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccc-------------------------------eeee
Confidence            7777665  567889999999999888766554332211000000                               0000


Q ss_pred             eeeCCCCcEEEEEeCCCeEEEEcCCCCccc-eeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC
Q psy2671         423 QAQCPEGEKLVSGSDDFTLFLWNPEKEKKS-LARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH  501 (573)
Q Consensus       423 ~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~-~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h  501 (573)
                      ....+ +..++..+.++.+.+|+....... ......+......+.+.|.+...+..+.|+...                
T Consensus       219 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~----------------  281 (373)
T d2madh_         219 AQANK-SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI----------------  281 (373)
T ss_pred             EEECC-CceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeE----------------
Confidence            01112 234556667888888887654321 122223333344455555544444444444221                


Q ss_pred             cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCE--EEEeeCCCcEEEcc
Q psy2671         502 VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEK--VASGGKDKVLRLWQ  572 (573)
Q Consensus       502 ~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~--l~s~~~d~~i~iw~  572 (573)
                            ..+.+++..+++...++.+.+||..+++.+..+. +...+.+++|+|||+.  +++++.|++|++|+
T Consensus       282 ------~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D  347 (373)
T d2madh_         282 ------YLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYD  347 (373)
T ss_pred             ------EEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEE
Confidence                  1234456677788888999999999999888775 5567899999999985  46889999999997

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=1.7e-18  Score=167.89  Aligned_cols=300  Identities=11%  Similarity=0.022  Sum_probs=190.5

Q ss_pred             EEEcCCCCeEEEEe-----CCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEE----------eeCCeEEEEE
Q psy2671         213 VKFSPNGRSLASGS-----GDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSG----------CKNGVIHAWD  277 (573)
Q Consensus       213 ~~fsp~g~~las~s-----~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sg----------s~dg~i~vwd  277 (573)
                      .+.+|||+.++...     .+.+|.+||..+++.+.++..+...  .++|||||++|+++          +.|+.|++||
T Consensus         7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D   84 (355)
T d2bbkh_           7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD   84 (355)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred             EeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEE
Confidence            35689999987653     4668999999999988887765443  79999999988764          4578999999


Q ss_pred             CCCCceeccccc--CCcc----cEEEEEecccccCCCCCEEEEE--eCCCcEEEEECCCCeEEEEecCCCccEEEEEECC
Q psy2671         278 SSTGKQIGQPMR--GHKQ----WITALSWEPFHLNHQCRRFASS--GKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGG  349 (573)
Q Consensus       278 ~~~~~~~~~~~~--~h~~----~v~~~~~~~~~~~~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~  349 (573)
                      ..+++.......  .+..    ....+.|     ++++++++.+  +.+..+++|+..+++....+..+....  ....+
T Consensus        85 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  157 (355)
T d2bbkh_          85 PVTLLPTADIELPDAPRFLVGTYPWMTSL-----TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH--IFPTA  157 (355)
T ss_dssp             TTTCCEEEEEEETTCCCCCBSCCGGGEEE-----CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE--EEEEE
T ss_pred             CCCCCEEEEEecCCcceeecCCCCceEEE-----ecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcce--EeecC
Confidence            999876532211  1111    1122333     3466666655  456789999999998887776544322  11122


Q ss_pred             CcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671         350 SGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG  429 (573)
Q Consensus       350 ~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (573)
                      ....+..+.|+....+.................                         ..      ...........+.+
T Consensus       158 ~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~-------------------------~~------~~~~~~~~~~~~~~  206 (355)
T d2bbkh_         158 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-------------------------PE------DEFLINHPAYSQKA  206 (355)
T ss_dssp             TTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-------------------------CT------TSCBCSCCEEETTT
T ss_pred             CcceEEEcCCCCEEEEEecCCCeEEEEeccccc-------------------------ce------ecceeeeccccCCC
Confidence            233445566666655544332211111000000                         00      00000001122456


Q ss_pred             cEEEEEeCCCeEEEEcCCCCccce-eeeccc----------cccEEEEEECCCCCEEEEeeCC----------CcEEEEe
Q psy2671         430 EKLVSGSDDFTLFLWNPEKEKKSL-ARMTGH----------QQLINCVEFSPDGRIIASASFD----------KSIKLWD  488 (573)
Q Consensus       430 ~~l~sg~~dg~i~lwd~~~~~~~~-~~~~~h----------~~~v~~v~~sp~g~~las~s~d----------g~i~lwd  488 (573)
                      ..++.++.++.+++|+........ .....+          ......++++|++..++..+.+          ..|.+||
T Consensus       207 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d  286 (355)
T d2bbkh_         207 GRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD  286 (355)
T ss_dssp             TEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred             CeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEe
Confidence            678888999999999987654321 111111          1122358899999988776544          3699999


Q ss_pred             CCCCeEEEeecCCcceEEEEEECCCCC--EEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEc
Q psy2671         489 GRIGKFITTLRGHVQAVYMVAWSSDSR--LLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWA  553 (573)
Q Consensus       489 ~~~~~~~~~~~~h~~~v~~v~~s~dg~--~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s  553 (573)
                      ..+++.+..+.. ...+.+++|+|||+  ++++++.|++|++||+++++.++.+.++...-..+.+.
T Consensus       287 ~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~  352 (355)
T d2bbkh_         287 AKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTA  352 (355)
T ss_dssp             TTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECC
T ss_pred             CCCCcEEEEecC-CCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeC
Confidence            999998887764 35678999999998  45677889999999999999999887665444444433

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=1.5e-18  Score=168.17  Aligned_cols=305  Identities=12%  Similarity=0.062  Sum_probs=183.4

Q ss_pred             EEEEEcCCCCeeEEe-----eCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEece
Q psy2671         114 ISVKFSPNGRSLASG-----SGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQ  188 (573)
Q Consensus       114 ~~l~~s~~~~~lat~-----s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (573)
                      .-.+.+|||+.++..     +.+++|.+||..+++++.+.                                        
T Consensus         5 ~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~----------------------------------------   44 (355)
T d2bbkh_           5 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMI----------------------------------------   44 (355)
T ss_dssp             BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEE----------------------------------------
T ss_pred             EeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEE----------------------------------------
Confidence            334568999988654     34678999999988654321                                        


Q ss_pred             eeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEE----------eCCCeEEEEECCCCeeeEEecCCCC-------c
Q psy2671         189 AVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASG----------SGDTTVRFWDVTTQTPLFKCEGHKH-------W  251 (573)
Q Consensus       189 ~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~----------s~d~~i~iwd~~~~~~~~~~~~h~~-------~  251 (573)
                                     ..+..+  .++|||||++|+++          +.|+.|++||..+++.+.....+..       .
T Consensus        45 ---------------~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~  107 (355)
T d2bbkh_          45 ---------------DGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY  107 (355)
T ss_dssp             ---------------EECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC
T ss_pred             ---------------ECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCC
Confidence                           112222  68999999988764          3478999999999987766543221       2


Q ss_pred             EEEEEEcCCCCeEEEEe--eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCC
Q psy2671         252 VLCIAWSPDSKQLVSGC--KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILS  329 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs--~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  329 (573)
                      ...++|+|||++++.++  .+..+.+|+..+++.+... ..+.... ...       ......+..+.||...++.....
T Consensus       108 ~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~-------~~~~~~~~~~~dg~~~~v~~~~~  178 (355)
T d2bbkh_         108 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPDCYH-IFP-------TAPDTFFMHCRDGSLAKVAFGTE  178 (355)
T ss_dssp             GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCSEEE-EEE-------EETTEEEEEETTSCEEEEECCSS
T ss_pred             CceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEE-ecCCcce-Eee-------cCCcceEEEcCCCCEEEEEecCC
Confidence            34679999999887764  4678999999988765322 1111111 000       01123445566666666655433


Q ss_pred             eEEEEe------cCCCccEEEEEEC-CCcEEEEEeCCCeEEEEeCCCCeeeE--eccCCcceeeEEEeccCceeEEEEcC
Q psy2671         330 QCVRVL------TSHTRSVTCIRWG-GSGLIYSASQDRTIKVWRASDGVMCR--TLEGHAHWVNTLALSTDYLMRVEATS  400 (573)
Q Consensus       330 ~~~~~~------~~h~~~v~~~~~~-~~~~l~s~s~d~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~~~~~~  400 (573)
                      ......      ..+...+....+. +++.++.++.++.+.+|++..+....  ...++........+.++.        
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--------  250 (355)
T d2bbkh_         179 GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG--------  250 (355)
T ss_dssp             SCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS--------
T ss_pred             CeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccc--------
Confidence            222211      1223334444444 44578888999999999988764321  112221111000000000        


Q ss_pred             CCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----------CeEEEEcCCCCccceeeeccccccEEEEEECC
Q psy2671         401 TGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----------FTLFLWNPEKEKKSLARMTGHQQLINCVEFSP  470 (573)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp  470 (573)
                                         ......++++..++....+          ..+.+||..+.+. +..+. +...+.+++|+|
T Consensus       251 -------------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~-~~~~~-~~~~~~~~a~sp  309 (355)
T d2bbkh_         251 -------------------WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER-LAKFE-MGHEIDSINVSQ  309 (355)
T ss_dssp             -------------------SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEE-EEEEECEEEECC
T ss_pred             -------------------eEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcE-EEEec-CCCCEEEEEEcC
Confidence                               0011223455555443322          4789999887653 33332 334578999999


Q ss_pred             CCC--EEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCC
Q psy2671         471 DGR--IIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSD  513 (573)
Q Consensus       471 ~g~--~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~d  513 (573)
                      ||+  ++++++.|+.|++||.++++.+.++.++...-..+.+.++
T Consensus       310 DG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         310 DEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADM  354 (355)
T ss_dssp             SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCC
T ss_pred             CCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEEeCCC
Confidence            998  4667788999999999999999999866544444444433

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=3.4e-16  Score=149.77  Aligned_cols=258  Identities=14%  Similarity=0.166  Sum_probs=151.4

Q ss_pred             CCCCcEEEEEEcCCCCeEEEEe-CCCeEEEEECCCCeeeEEe---cCCCCcEEEEEEcCCCCeEEEEee-CCeEEEEECC
Q psy2671         205 GHAEAVISVKFSPNGRSLASGS-GDTTVRFWDVTTQTPLFKC---EGHKHWVLCIAWSPDSKQLVSGCK-NGVIHAWDSS  279 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~s-~d~~i~iwd~~~~~~~~~~---~~h~~~V~~v~~s~dg~~l~sgs~-dg~i~vwd~~  279 (573)
                      .|.+.|.+++|||||++|++++ .|+.|++|++.........   ..+...+..++|+|||++|++++. ++.+.+|+..
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~  113 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE  113 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence            3667889999999999996554 5899999998765432222   223345678999999999998875 6789999876


Q ss_pred             CCceecc-cccCCcccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeEEE------EecCCCccEEEEEECCCc
Q psy2671         280 TGKQIGQ-PMRGHKQWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVR------VLTSHTRSVTCIRWGGSG  351 (573)
Q Consensus       280 ~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~------~~~~h~~~v~~~~~~~~~  351 (573)
                      ....... ....+...+.++.+.|     ++++++.++ .+..+.+|+........      ...........++|++++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~s~-----d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~  188 (333)
T d1ri6a_         114 DGLPVGVVDVVEGLDGCHSANISP-----DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE  188 (333)
T ss_dssp             TTEEEEEEEEECCCTTBCCCEECT-----TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred             cccceecccccCCCccceEEEeee-----cceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccc
Confidence            6543211 1223344455555444     566666655 45678999876543221      112234456788888776


Q ss_pred             -E-EEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC
Q psy2671         352 -L-IYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG  429 (573)
Q Consensus       352 -~-l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (573)
                       . +.+....+...+|+.........      ....+...+..           .          ...........++++
T Consensus       189 ~~~~~~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~-----------~----------~~~~~~~~~~~s~d~  241 (333)
T d1ri6a_         189 QYAYCVNELNSSVDVWELKDPHGNIE------CVQTLDMMPEN-----------F----------SDTRWAADIHITPDG  241 (333)
T ss_dssp             SEEEEEETTTTEEEEEESSCTTSCCE------EEEEEECSCTT-----------C----------CSCCCEEEEEECTTS
T ss_pred             eeEEeeccccCceEEEeeccccccee------eeeeeeeeecC-----------C----------CccccceeEEEeccc
Confidence             3 33444666777776543211000      00000000000           0          000000011234666


Q ss_pred             cEE-EEEeCCCeEEEEcCCCCccce--eeeccccccEEEEEECCCCCEEEEee-CCCcEEEE--eCCCCeE
Q psy2671         430 EKL-VSGSDDFTLFLWNPEKEKKSL--ARMTGHQQLINCVEFSPDGRIIASAS-FDKSIKLW--DGRIGKF  494 (573)
Q Consensus       430 ~~l-~sg~~dg~i~lwd~~~~~~~~--~~~~~h~~~v~~v~~sp~g~~las~s-~dg~i~lw--d~~~~~~  494 (573)
                      +++ +++..++++.+|++.......  .........+.+++|+|||++|++++ .++.|++|  |.++|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             CceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            654 455667899999876543322  22222334567899999999877665 56899998  6677764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=4.2e-16  Score=149.06  Aligned_cols=273  Identities=10%  Similarity=0.110  Sum_probs=166.5

Q ss_pred             EEEEeCCCeEEEEECCCCeee--EEecCCCCcEEEEEEcCCCCeEEEEe-eCCeEEEEECCCCceeccc--ccCCcccEE
Q psy2671         222 LASGSGDTTVRFWDVTTQTPL--FKCEGHKHWVLCIAWSPDSKQLVSGC-KNGVIHAWDSSTGKQIGQP--MRGHKQWIT  296 (573)
Q Consensus       222 las~s~d~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~s~dg~~l~sgs-~dg~i~vwd~~~~~~~~~~--~~~h~~~v~  296 (573)
                      +++++.|++|++|++.+...+  .....|.+.+.+|+|||||++|++++ .|+.|++|++.........  ...+...+.
T Consensus         7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~   86 (333)
T d1ri6a_           7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT   86 (333)
T ss_dssp             EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred             EEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCce
Confidence            477789999999998754332  23335778899999999999996655 5899999998765432111  111223344


Q ss_pred             EEEecccccCCCCCEEEEEeC-CCcEEEEECCCCeEEEE--ecCCCccEEEEEECCCc-EEEEEe-CCCeEEEEeCCCCe
Q psy2671         297 ALSWEPFHLNHQCRRFASSGK-DGAIRIWDVILSQCVRV--LTSHTRSVTCIRWGGSG-LIYSAS-QDRTIKVWRASDGV  371 (573)
Q Consensus       297 ~~~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~-~l~s~s-~d~~i~vw~~~~~~  371 (573)
                      .++|.|     +++++++++. ++.+++|+.........  ...+...+.++.+++++ .++.++ .+..+.+|+.....
T Consensus        87 ~l~~sp-----Dg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~  161 (333)
T d1ri6a_          87 HISTDH-----QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG  161 (333)
T ss_dssp             EEEECT-----TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             EEEEcC-----CCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence            566654     7788887774 67899998766544333  34566677888898877 444444 56778999876543


Q ss_pred             eeEecc------CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEE-EeCCCeEEEE
Q psy2671         372 MCRTLE------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVS-GSDDFTLFLW  444 (573)
Q Consensus       372 ~~~~~~------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-g~~dg~i~lw  444 (573)
                      ......      ........++                                     ..+++..+.. ....+...+|
T Consensus       162 ~~~~~~~~~~~~~~g~~p~~i~-------------------------------------~~~~~~~~~~~~~~~~~~~v~  204 (333)
T d1ri6a_         162 HLVAQDPAEVTTVEGAGPRHMV-------------------------------------FHPNEQYAYCVNELNSSVDVW  204 (333)
T ss_dssp             CEEEEEEEEEECSTTCCEEEEE-------------------------------------ECTTSSEEEEEETTTTEEEEE
T ss_pred             cceeeeceeeeeecCCCccEEE-------------------------------------EeccceeEEeeccccCceEEE
Confidence            221110      0111111222                                     2344444433 3345566666


Q ss_pred             cCCCCcccee---ee------ccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeec---CCcceEEEEEEC
Q psy2671         445 NPEKEKKSLA---RM------TGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLR---GHVQAVYMVAWS  511 (573)
Q Consensus       445 d~~~~~~~~~---~~------~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~---~h~~~v~~v~~s  511 (573)
                      +.......+.   ..      .........+++++++++++.. ..++.+.+|+.........+.   .....+..++|+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~s  284 (333)
T d1ri6a_         205 ELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD  284 (333)
T ss_dssp             ESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred             eecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEe
Confidence            5433221111   11      1122346778999999876654 567889999876543222222   223446678999


Q ss_pred             CCCCEEEEEe-CCCcEEEEeC--Ccccc
Q psy2671         512 SDSRLLVSGS-ADSTLKVWNM--KTKKI  536 (573)
Q Consensus       512 ~dg~~las~s-~D~~v~vwd~--~~~~~  536 (573)
                      |||++|++++ .++.|++|++  +++++
T Consensus       285 pDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         285 HSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             TTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             CCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            9999887765 5688999955  45544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.72  E-value=8.3e-16  Score=154.92  Aligned_cols=152  Identities=13%  Similarity=0.176  Sum_probs=108.9

Q ss_pred             EEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEe
Q psy2671         115 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVR  194 (573)
Q Consensus       115 ~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (573)
                      ++.|.++++++..  .|+.+.+||..+++...-.                                              
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~----------------------------------------------   52 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFL----------------------------------------------   52 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEE----------------------------------------------
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEE----------------------------------------------
Confidence            3568889988764  4788999999988642110                                              


Q ss_pred             eccccccCCCCCCCcEEEEEEcCCCCeEEEEeC---------CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEE
Q psy2671         195 PVTRCTSSMPGHAEAVISVKFSPNGRSLASGSG---------DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLV  265 (573)
Q Consensus       195 ~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~---------d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~  265 (573)
                          ....+.+|...|.++.|||||++|+.++.         ++.+.|||+.+++. ..+..|...+..+.|||||++||
T Consensus        53 ----~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia  127 (470)
T d2bgra1          53 ----ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLA  127 (470)
T ss_dssp             ----CTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEE
T ss_pred             ----chhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCCccccccccccCcceee
Confidence                01345678889999999999999998853         56789999998874 45778888999999999999999


Q ss_pred             EEeeCCeEEEEECCCCceecccccCCcc-----------------cEEEEEecccccCCCCCEEEEEeCCCc-EEEEE
Q psy2671         266 SGCKNGVIHAWDSSTGKQIGQPMRGHKQ-----------------WITALSWEPFHLNHQCRRFASSGKDGA-IRIWD  325 (573)
Q Consensus       266 sgs~dg~i~vwd~~~~~~~~~~~~~h~~-----------------~v~~~~~~~~~~~~~~~~l~s~~~dg~-v~iwd  325 (573)
                      .. .++.+.+|+..++........+...                 ...++.|+|     ++++++....|.+ ++.|.
T Consensus       128 ~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-----DGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         128 YV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-----NGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             EE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-----TSSEEEEEEEECTTCCEEE
T ss_pred             Ee-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECC-----CCCccceeEecCCcCceEE
Confidence            84 6789999999888654322222111                 123345554     7788888765533 44443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.64  E-value=1.4e-14  Score=140.67  Aligned_cols=299  Identities=7%  Similarity=-0.074  Sum_probs=177.4

Q ss_pred             CCCCcEEEEEEcCCCCeEE---EEeCCC--eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe----------e
Q psy2671         205 GHAEAVISVKFSPNGRSLA---SGSGDT--TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC----------K  269 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~la---s~s~d~--~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs----------~  269 (573)
                      .+.++...++..++++...   ++..++  .+.+||..+++.+....++...  .++|+|||+.|++++          .
T Consensus        17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~   94 (368)
T d1mdah_          17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKR   94 (368)
T ss_dssp             CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred             ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCcccccccc
Confidence            3445555666788888542   233344  5777799999988877766654  589999999988754          4


Q ss_pred             CCeEEEEECCCCceecccccCCc-------ccEEEEEecccccCCCCCEEEEEe-CCCcEEEEECCCCeEEEEecCCCcc
Q psy2671         270 NGVIHAWDSSTGKQIGQPMRGHK-------QWITALSWEPFHLNHQCRRFASSG-KDGAIRIWDVILSQCVRVLTSHTRS  341 (573)
Q Consensus       270 dg~i~vwd~~~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~h~~~  341 (573)
                      |+.|.+||..+++.+.... .+.       .....+.|     ++++++++.+. .++.+.+||+.+++....+..+...
T Consensus        95 d~~v~v~D~~t~~~~~~i~-~p~~~~~~~g~~p~~~a~-----SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~  168 (368)
T d1mdah_          95 TDYVEVFDPVTFLPIADIE-LPDAPRFSVGPRVHIIGN-----CASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCF  168 (368)
T ss_dssp             EEEEEEECTTTCCEEEEEE-ETTSCSCCBSCCTTSEEE-----CTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCC
T ss_pred             CCeEEEEECCCCcEeeeec-CCccceecccCCccceEE-----CCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcc
Confidence            7889999999987653321 110       11113444     44778777665 6799999999999888877655432


Q ss_pred             EEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc------CCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhh
Q psy2671         342 VTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE------GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESS  415 (573)
Q Consensus       342 v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (573)
                      .  +...+...++..+.|+++.+++...........      .+...+.......+...                     
T Consensus       169 ~--~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---------------------  225 (368)
T d1mdah_         169 H--IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML---------------------  225 (368)
T ss_dssp             C--CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE---------------------
T ss_pred             e--EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEE---------------------
Confidence            1  111233456677888888888876543221111      11111111111111000                     


Q ss_pred             hhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeec-cccccEEEEEECCCCCEEEEeeCC---------CcEE
Q psy2671         416 KHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMT-GHQQLINCVEFSPDGRIIASASFD---------KSIK  485 (573)
Q Consensus       416 ~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~-~h~~~v~~v~~sp~g~~las~s~d---------g~i~  485 (573)
                              .....+...+.....+.+.+++............ ........++++|++..+.....+         ..|.
T Consensus       226 --------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~  297 (368)
T d1mdah_         226 --------VWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS  297 (368)
T ss_dssp             --------EECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred             --------EEecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEE
Confidence                    0001112222222333333333222111000000 001112347889998877665332         3589


Q ss_pred             EEeCCCCeEEEeecCCcceEEEEEECCCCCE--EEEEeCCCcEEEEeCCcccccccccCc
Q psy2671         486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRL--LVSGSADSTLKVWNMKTKKIEQDLPGH  543 (573)
Q Consensus       486 lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~--las~s~D~~v~vwd~~~~~~~~~l~~h  543 (573)
                      +||..+++.+..+.. ...+..++|||||+.  ++++..|+.|++||..+++.++.++..
T Consensus       298 v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g  356 (368)
T d1mdah_         298 SVTASVGQTSGPISN-GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD  356 (368)
T ss_dssp             EEESSSCCEEECCEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred             EEECCCCcEeEEecC-CCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC
Confidence            999999998887763 357889999999973  467778999999999999998887744

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.62  E-value=4.6e-14  Score=141.92  Aligned_cols=116  Identities=14%  Similarity=0.109  Sum_probs=87.4

Q ss_pred             ccCCCccccEEEEEEcCCCCeeEEeeC---------CCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCC
Q psy2671         104 SSMPGHAEAVISVKFSPNGRSLASGSG---------DTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDT  174 (573)
Q Consensus       104 ~~~~gH~~~V~~l~~s~~~~~lat~s~---------D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (573)
                      ..|.+|...|.+++|||||++||.++.         ++.+.|||+.+++.                              
T Consensus        55 ~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~------------------------------  104 (470)
T d2bgra1          55 STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL------------------------------  104 (470)
T ss_dssp             TTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE------------------------------
T ss_pred             hhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc------------------------------
Confidence            356788899999999999999998853         56778888877642                              


Q ss_pred             CCccceEEEEEeceeeEEEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecC-------
Q psy2671         175 LNTEEVVDIVYQKQAVFQVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEG-------  247 (573)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~-------  247 (573)
                                                ..+.+|.+.+..+.|||||+.+|... ++.+.+|+..+++.......       
T Consensus       105 --------------------------~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~  157 (470)
T d2bgra1         105 --------------------------ITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIY  157 (470)
T ss_dssp             --------------------------CCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred             --------------------------cccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCccc
Confidence                                      23456788899999999999999865 67899999988765543322       


Q ss_pred             -----------CCCcEEEEEEcCCCCeEEEEeeCCe-EEEE
Q psy2671         248 -----------HKHWVLCIAWSPDSKQLVSGCKNGV-IHAW  276 (573)
Q Consensus       248 -----------h~~~V~~v~~s~dg~~l~sgs~dg~-i~vw  276 (573)
                                 +.+....+.|||||++|+....|.. +..|
T Consensus       158 ~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~  198 (470)
T d2bgra1         158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLI  198 (470)
T ss_dssp             ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEE
T ss_pred             ccccceeeeeeecCCccccEECCCCCccceeEecCCcCceE
Confidence                       1223456789999999999876543 4443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.62  E-value=7.2e-15  Score=142.82  Aligned_cols=251  Identities=9%  Similarity=0.011  Sum_probs=147.2

Q ss_pred             EEEEcCCCCeEEEEe----------CCCeEEEEECCCCeeeEEecCCCC-------cEEEEEEcCCCCeEEEEe-eCCeE
Q psy2671         212 SVKFSPNGRSLASGS----------GDTTVRFWDVTTQTPLFKCEGHKH-------WVLCIAWSPDSKQLVSGC-KNGVI  273 (573)
Q Consensus       212 ~~~fsp~g~~las~s----------~d~~i~iwd~~~~~~~~~~~~h~~-------~V~~v~~s~dg~~l~sgs-~dg~i  273 (573)
                      .++|+|||+.|+.++          .|++|++||..+++++..+..+..       ....++|+|||++|+++. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            478999999998764          377899999999988777653322       123589999999998876 56899


Q ss_pred             EEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEE------ecCCCccEEEEEE
Q psy2671         274 HAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRV------LTSHTRSVTCIRW  347 (573)
Q Consensus       274 ~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~------~~~h~~~v~~~~~  347 (573)
                      .+||+.+++..... ..+.....    .|    .....++..+.||.+.+++.........      ...+...+....+
T Consensus       149 ~~~d~~~~~~~~~~-~~~~~~~~----~~----~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (368)
T d1mdah_         149 AGLSVPGASDDQLT-KSASCFHI----HP----GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQA  219 (368)
T ss_dssp             EEEEETTTEEEEEE-ECSSCCCC----EE----EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEE
T ss_pred             EEEECCCCcEeEEe-eccCcceE----cc----CCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeeccc
Confidence            99999988765332 11111100    01    1124566677888888888765432211      1223334445556


Q ss_pred             CCCcEEEEEeCCCeEEEEeCCCCeeeEe--ccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeee
Q psy2671         348 GGSGLIYSASQDRTIKVWRASDGVMCRT--LEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQ  425 (573)
Q Consensus       348 ~~~~~l~s~s~d~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  425 (573)
                      .+++..+. +..+.+.+++...+.....  ...+........+.+.                           -......
T Consensus       220 ~~~g~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------g~~~~a~  271 (368)
T d1mdah_         220 NYPGMLVW-AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSA---------------------------GFQMVAK  271 (368)
T ss_dssp             TTTTEEEE-CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC---------------------------SSSCEEE
T ss_pred             ccCcEEEE-ecCCCEEEEeecCCceEEEeecccccceeeeeeecCC---------------------------CceeEEE
Confidence            66654332 2344555555544332211  1111000000000000                           0001122


Q ss_pred             CCCCcEEEEEeCC---------CeEEEEcCCCCccceeeeccccccEEEEEECCCCC--EEEEeeCCCcEEEEeCCCCeE
Q psy2671         426 CPEGEKLVSGSDD---------FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGR--IIASASFDKSIKLWDGRIGKF  494 (573)
Q Consensus       426 ~~~~~~l~sg~~d---------g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~--~las~s~dg~i~lwd~~~~~~  494 (573)
                      ++++..+.....+         ..+.+||..+.+. +..+. +...+.+++|+|||+  +++++..|+.|++||..+++.
T Consensus       272 ~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~-~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~  349 (368)
T d1mdah_         272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-SGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD  349 (368)
T ss_dssp             ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-EECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred             cCCCCEEEEEecCCCceeecCCceEEEEECCCCcE-eEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            3445544333211         3588999887653 33332 335688999999997  356777899999999999999


Q ss_pred             EEeecCC
Q psy2671         495 ITTLRGH  501 (573)
Q Consensus       495 ~~~~~~h  501 (573)
                      +.+++..
T Consensus       350 ~~~i~~g  356 (368)
T d1mdah_         350 QSSVELD  356 (368)
T ss_dssp             EEECCCC
T ss_pred             EEEEECC
Confidence            9888743

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.48  E-value=1.6e-14  Score=139.54  Aligned_cols=330  Identities=12%  Similarity=0.037  Sum_probs=177.4

Q ss_pred             eEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeEEEeeccccccCCC
Q psy2671         125 LASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVFQVRPVTRCTSSMP  204 (573)
Q Consensus       125 lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (573)
                      ++||+.+|+|+|||+.+++.+..+...    .+.....       ..+... ..+++             ........-.
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVf----spd~~~g-------~g~~~e-s~~vl-------------~~~~~~~~gd   68 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVF----NVDSATG-------WGITNE-SKEIL-------------GGDQQYLNGD   68 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSS----SBCTTTC-------TTTSHH-HHHHH-------------CSSSCCSCCC
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeE----cCCCCEE-------EEECCc-cceEE-------------ecccccccCc
Confidence            678889999999999999877554321    1111000       000000 00000             0000011123


Q ss_pred             CCCCcEEEEEEcCCCCeEEEE-eCCCeEEEEECCCCeeeEEec-CCCCcEEEEEEcCCCCe--EEEEeeCC---------
Q psy2671         205 GHAEAVISVKFSPNGRSLASG-SGDTTVRFWDVTTQTPLFKCE-GHKHWVLCIAWSPDSKQ--LVSGCKNG---------  271 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~-s~d~~i~iwd~~~~~~~~~~~-~h~~~V~~v~~s~dg~~--l~sgs~dg---------  271 (573)
                      .|.-......++|||++|+.. ..+.+|.++|+.+.+...... .+......++|+|||++  ++..+.+.         
T Consensus        69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~  148 (441)
T d1qnia2          69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTD  148 (441)
T ss_dssp             BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSC
T ss_pred             ccCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccc
Confidence            455566677778999998655 578899999999988766554 45667899999999994  44444332         


Q ss_pred             --------eEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCC-cEEEEECCCCeEEEEecCCCccE
Q psy2671         272 --------VIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDG-AIRIWDVILSQCVRVLTSHTRSV  342 (573)
Q Consensus       272 --------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~h~~~v  342 (573)
                              .+..+|..+.+...+...+.  ....+.+     +++++++.+++.+. .+..++..+......+..... -
T Consensus       149 ~~~~~~~~~~~~iD~~t~~v~~qI~v~~--~p~~v~~-----spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~-p  220 (441)
T d1qnia2         149 FSLDNSYTMFTAIDAETMDVAWQVIVDG--NLDNTDA-----DYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV-E  220 (441)
T ss_dssp             CCGGGEEEEEEEEETTTCSEEEEEEESS--CCCCEEE-----CSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEH-H
T ss_pred             cccccccceEEeecCccceeeEEEecCC--CccceEE-----CCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCc-c
Confidence                    23446665554332221111  1222333     34666666555432 221112111111111000000 0


Q ss_pred             EEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhhe
Q psy2671         343 TCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKY  422 (573)
Q Consensus       343 ~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (573)
                      ..+.+.++|.....+.++.+.++.......+..+..... ..                                     -
T Consensus       221 ~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks-Ph-------------------------------------G  262 (441)
T d1qnia2         221 RIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN-PH-------------------------------------G  262 (441)
T ss_dssp             HHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS-CC-------------------------------------C
T ss_pred             ceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC-cc-------------------------------------C
Confidence            001112344333334456666665554433333322111 01                                     1


Q ss_pred             eeeCCCCcEE-EEEeCCCeEEEEcCCCCccce-------eeecccc---ccEEEEEECCCCCEEEEeeCCCcEEEEeCC-
Q psy2671         423 QAQCPEGEKL-VSGSDDFTLFLWNPEKEKKSL-------ARMTGHQ---QLINCVEFSPDGRIIASASFDKSIKLWDGR-  490 (573)
Q Consensus       423 ~~~~~~~~~l-~sg~~dg~i~lwd~~~~~~~~-------~~~~~h~---~~v~~v~~sp~g~~las~s~dg~i~lwd~~-  490 (573)
                      ...+|+|+++ +++..++++.+||+++....+       ..+.++.   -.....+|+++|..+.+.+.|..|..|++. 
T Consensus       263 v~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~  342 (441)
T d1qnia2         263 LNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIAD  342 (441)
T ss_dssp             EEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred             ceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccch
Confidence            2345788876 567789999999976432111       0111111   113456899999999999999999999853 


Q ss_pred             ---------CCeEEEee-----cCCcceEEEEEECCCCCEEEEE---eCCCc
Q psy2671         491 ---------IGKFITTL-----RGHVQAVYMVAWSSDSRLLVSG---SADST  525 (573)
Q Consensus       491 ---------~~~~~~~~-----~~h~~~v~~v~~s~dg~~las~---s~D~~  525 (573)
                               ....+..+     .||...+.+.+++|||+||+++   |.|..
T Consensus       343 ~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~  394 (441)
T d1qnia2         343 AIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF  394 (441)
T ss_dssp             HHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred             hhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccC
Confidence                     11233333     4777777778899999999999   55543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.44  E-value=1.2e-13  Score=133.25  Aligned_cols=298  Identities=14%  Similarity=0.078  Sum_probs=173.2

Q ss_pred             EEEEeCCCeEEEEECCCCeeeEEec------------------------------CCCCcEEEEEEcCCCCeEEEEe-eC
Q psy2671         222 LASGSGDTTVRFWDVTTQTPLFKCE------------------------------GHKHWVLCIAWSPDSKQLVSGC-KN  270 (573)
Q Consensus       222 las~s~d~~i~iwd~~~~~~~~~~~------------------------------~h~~~V~~v~~s~dg~~l~sgs-~d  270 (573)
                      ++|++.+|.|++|++.+++.+.++.                              .|........++|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            5677889999999998877655531                              1333345556689999996654 67


Q ss_pred             CeEEEEECCCCceecccccCCcccEEEEEecccccCCCCC--EEEEEeCCC-----------------cEEEEECCCCeE
Q psy2671         271 GVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCR--RFASSGKDG-----------------AIRIWDVILSQC  331 (573)
Q Consensus       271 g~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~--~l~s~~~dg-----------------~v~iwd~~~~~~  331 (573)
                      +.|.++|+.+++........+.....++++.|     +++  +++..+.+.                 .+..+|..+.+.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~sp-----dg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v  168 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQK-----VPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDV  168 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECC-----SSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEec-----cCCEEEEEeccCCcccccCcccccccccccceEEeecCcccee
Confidence            89999999998754322223455677777765     333  344333332                 123456665555


Q ss_pred             EEEecCCCccEEEEEECCCc-EEEEEeCCC-eEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCC
Q psy2671         332 VRVLTSHTRSVTCIRWGGSG-LIYSASQDR-TIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPA  409 (573)
Q Consensus       332 ~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~-~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~  409 (573)
                      ...+... .....+.+++++ .+++.+.+. .+..++..+....       ..+....                      
T Consensus       169 ~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~-------d~i~v~n----------------------  218 (441)
T d1qnia2         169 AWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDR-------DWVVVFN----------------------  218 (441)
T ss_dssp             EEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSB-------CEEEEEE----------------------
T ss_pred             eEEEecC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceE-------EEEEeCC----------------------
Confidence            4444322 234566677666 455544432 2211111111000       0000000                      


Q ss_pred             CchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEE-EeeCCCcEEEEe
Q psy2671         410 NPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIA-SASFDKSIKLWD  488 (573)
Q Consensus       410 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~la-s~s~dg~i~lwd  488 (573)
                               ........|+|+++.. +.++.+.+++.... ..+..+... +....+.++|||++++ ++..+++|.+||
T Consensus       219 ---------~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~-~v~~~IPvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d  286 (441)
T d1qnia2         219 ---------VERIAAAVKAGNFKTI-GDSKVPVVDGRGES-EFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIA  286 (441)
T ss_dssp             ---------HHHHHHHHHTTCCBCC-TTCCCCEEECSSSC-SSEEEECCB-SSCCCEEECTTSCEEEEECTTSSBEEEEE
T ss_pred             ---------ccceEEEecCCCEEEe-CCCCcEEEEcccCC-ceEEEEeCC-CCccCceECCCCCEEEEeCCcCCcEEEEE
Confidence                     0000011245555443 34566667765433 233444433 3357899999999764 577899999999


Q ss_pred             CCCCeEE--------EeecCC---cceEEEEEECCCCCEEEEEeCCCcEEEEeCCcc----------ccccc-----ccC
Q psy2671         489 GRIGKFI--------TTLRGH---VQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTK----------KIEQD-----LPG  542 (573)
Q Consensus       489 ~~~~~~~--------~~~~~h---~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~----------~~~~~-----l~~  542 (573)
                      ..+.+..        .++.++   .-.....+|.++|..+.+...|+.|..|++...          .....     ..|
T Consensus       287 ~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~G  366 (441)
T d1qnia2         287 IDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPG  366 (441)
T ss_dssp             GGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE
T ss_pred             eehhhhHhhccCCcceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCC
Confidence            7642210        111111   112345689999988889999999999998421          11122     267


Q ss_pred             cCCCEEEEEEccCCCEEEEe---eCCC
Q psy2671         543 HGDEVYAVDWAPDGEKVASG---GKDK  566 (573)
Q Consensus       543 h~~~v~~~~~s~d~~~l~s~---~~d~  566 (573)
                      |...+.+..++|||+||+++   |.|+
T Consensus       367 H~~~~~~~t~~pdGk~l~s~~k~s~dr  393 (441)
T d1qnia2         367 HNHASLTESRDADGKWLVVLSKFSKDR  393 (441)
T ss_dssp             EEEETTTTSTTCCCCEEEEEESCCGGG
T ss_pred             CCccccccccCCCCcEEEecCcccccc
Confidence            87777788899999999999   5554

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.07  E-value=2.8e-08  Score=92.32  Aligned_cols=240  Identities=12%  Similarity=0.020  Sum_probs=144.4

Q ss_pred             cEEEEEEcCCCCeeEEeeCCCcEEEeeccCCcceeeecCCCeeeeecccccccccccccCCCCCCccceEEEEEeceeeE
Q psy2671         112 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGTPYLFYVNETEITKTLADVLPLDTLNTEEVVDIVYQKQAVF  191 (573)
Q Consensus       112 ~V~~l~~s~~~~~lat~s~D~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (573)
                      ++..++++|||++++|...+++|..||-......                                              
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~----------------------------------------------   62 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI----------------------------------------------   62 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE----------------------------------------------
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEE----------------------------------------------
Confidence            6889999999999999999998888875432111                                              


Q ss_pred             EEeeccccccCCCCCCCcEEEEEEcCCCCeEEEEeCCCeEEEEECCCCe--eeE-EecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         192 QVRPVTRCTSSMPGHAEAVISVKFSPNGRSLASGSGDTTVRFWDVTTQT--PLF-KCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       192 ~~~~~~~~~~~~~gh~~~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~--~~~-~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                                 +......+.+++|+|+|+++++...++.+..|+.....  ... ...........+++.++|+++++.+
T Consensus        63 -----------~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~  131 (302)
T d2p4oa1          63 -----------HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS  131 (302)
T ss_dssp             -----------EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET
T ss_pred             -----------EEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeecc
Confidence                       00123568899999999999998888888888765432  111 1123445678999999999888888


Q ss_pred             eCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC
Q psy2671         269 KNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG  348 (573)
Q Consensus       269 ~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~  348 (573)
                      .++.+..++...+.......            .+...                          .............+.+.
T Consensus       132 ~~~~i~~~~~~~~~~~~~~~------------~~~~~--------------------------~~~~~~~~~~~ngi~~~  173 (302)
T d2p4oa1         132 YRGAIWLIDVVQPSGSIWLE------------HPMLA--------------------------RSNSESVFPAANGLKRF  173 (302)
T ss_dssp             TTTEEEEEETTTTEEEEEEE------------CGGGS--------------------------CSSTTCCSCSEEEEEEE
T ss_pred             ccccceeeeccCCcceeEec------------CCccc--------------------------eeeccCccccccccccc
Confidence            88888888876553210000            00000                          00000111223445555


Q ss_pred             CCcEEEEEeCCCeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCC
Q psy2671         349 GSGLIYSASQDRTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPE  428 (573)
Q Consensus       349 ~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  428 (573)
                      ++..+++.+..+.|..++...........        ......                           ...-.+..++
T Consensus       174 ~~~l~~~~~~~~~i~~~~~~~~~~~~~~~--------~~~~~~---------------------------~pdgia~d~d  218 (302)
T d2p4oa1         174 GNFLYVSNTEKMLLLRIPVDSTDKPGEPE--------IFVEQT---------------------------NIDDFAFDVE  218 (302)
T ss_dssp             TTEEEEEETTTTEEEEEEBCTTSCBCCCE--------EEEESC---------------------------CCSSEEEBTT
T ss_pred             CCceeeecCCCCeEEeccccccccccccc--------cccCCC---------------------------CCcceEECCC
Confidence            55566667777777777765432211100        000000                           0001123467


Q ss_pred             CcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE---CCCCCEEEEeeCC
Q psy2671         429 GEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF---SPDGRIIASASFD  481 (573)
Q Consensus       429 ~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~---sp~g~~las~s~d  481 (573)
                      |.+.++...++.|..+++......+......-...++++|   ++|++.|..++..
T Consensus       219 G~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         219 GNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             CCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred             CCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECCC
Confidence            8888888888999999876543333333333345789999   6788887766544

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.94  E-value=2.4e-07  Score=85.77  Aligned_cols=230  Identities=12%  Similarity=0.046  Sum_probs=129.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM  288 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~  288 (573)
                      .+..++++|||+++++...+++|..|+.......  +......+.+++|++||+.+++...++.+..|+.......... 
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~--~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~-  105 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQI--HATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET-  105 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEE--EEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE-
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEE--EEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceee-
Confidence            5778999999999999999999998886654332  3334467899999999998888878888877765332110000 


Q ss_pred             cCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEE-EEeCCCeEEEEeC
Q psy2671         289 RGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIY-SASQDRTIKVWRA  367 (573)
Q Consensus       289 ~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~-s~s~d~~i~vw~~  367 (573)
                               +.                         +.          ........+.+.+++.++ +.+.++.+..++.
T Consensus       106 ---------~~-------------------------~~----------~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~  141 (302)
T d2p4oa1         106 ---------LL-------------------------TL----------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDV  141 (302)
T ss_dssp             ---------EE-------------------------EC----------TTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred             ---------cc-------------------------cc----------CCccccceeEEccCCCEEeeccccccceeeec
Confidence                     00                         00          001122333444444322 2233444444444


Q ss_pred             CCCeeeEeccC--------C--cceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC
Q psy2671         368 SDGVMCRTLEG--------H--AHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD  437 (573)
Q Consensus       368 ~~~~~~~~~~~--------~--~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~  437 (573)
                      ..+........        +  ....+.+..                                      ..+..+++.+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~--------------------------------------~~~~l~~~~~~  183 (302)
T d2p4oa1         142 VQPSGSIWLEHPMLARSNSESVFPAANGLKR--------------------------------------FGNFLYVSNTE  183 (302)
T ss_dssp             TTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--------------------------------------ETTEEEEEETT
T ss_pred             cCCcceeEecCCccceeeccCcccccccccc--------------------------------------cCCceeeecCC
Confidence            43321110000        0  000001110                                      11234555666


Q ss_pred             CCeEEEEcCCCCccce-eeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCe-EEEeecCCcceEEEEEE---CC
Q psy2671         438 DFTLFLWNPEKEKKSL-ARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGK-FITTLRGHVQAVYMVAW---SS  512 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~-~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~-~~~~~~~h~~~v~~v~~---s~  512 (573)
                      .+.|..++........ ............++|+++|+++++...++.|..++..... .+..........++++|   ++
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~  263 (302)
T d2p4oa1         184 KMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEG  263 (302)
T ss_dssp             TTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTT
T ss_pred             CCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCC
Confidence            7777777755432211 1111112234569999999998888889999999875432 22333334456789999   67


Q ss_pred             CCCEEEEEeCC
Q psy2671         513 DSRLLVSGSAD  523 (573)
Q Consensus       513 dg~~las~s~D  523 (573)
                      |++.|+.++..
T Consensus       264 D~~~Lyvtt~~  274 (302)
T d2p4oa1         264 DCTAIYVVTNG  274 (302)
T ss_dssp             TTTEEEEEECT
T ss_pred             CCCEEEEECCC
Confidence            88888766543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=6.1e-07  Score=81.33  Aligned_cols=94  Identities=17%  Similarity=0.197  Sum_probs=64.1

Q ss_pred             cccccEEEEEECCCCCEEEEeeCCC---cEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC---CCcEEEEeC
Q psy2671         458 GHQQLINCVEFSPDGRIIASASFDK---SIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA---DSTLKVWNM  531 (573)
Q Consensus       458 ~h~~~v~~v~~sp~g~~las~s~dg---~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~---D~~v~vwd~  531 (573)
                      .+........++|+++.++..+.++   .+.+.|...+... .+ .+........|||||++||-.+.   ...++++++
T Consensus       168 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~  245 (269)
T d2hqsa1         168 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VL-SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST  245 (269)
T ss_dssp             CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-EC-CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred             cccccccccccccccceeEEEeecCCceeeeEeecccccce-Ee-ecCccccceEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            3445566788999999988766544   3455566555432 22 23344567789999999875443   346899999


Q ss_pred             CcccccccccCcCCCEEEEEEcc
Q psy2671         532 KTKKIEQDLPGHGDEVYAVDWAP  554 (573)
Q Consensus       532 ~~~~~~~~l~~h~~~v~~~~~s~  554 (573)
                      .++.. ..+....+.+...+|||
T Consensus       246 dg~~~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         246 DGRFK-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             TSCCE-EECCCSSSEEEEEEECC
T ss_pred             CCCCE-EEEeCCCCcEEeEEeCC
Confidence            87665 44555667788899998

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.88  E-value=2.6e-06  Score=77.58  Aligned_cols=236  Identities=15%  Similarity=0.212  Sum_probs=137.7

Q ss_pred             EEEEEEcCCCCeEEEEeeCCeEEEEECCCCceecccc-----cCCcccEEEEEecccccCCCCCEEEE-EeCCCcEEEEE
Q psy2671         252 VLCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPM-----RGHKQWITALSWEPFHLNHQCRRFAS-SGKDGAIRIWD  325 (573)
Q Consensus       252 V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~l~s-~~~dg~v~iwd  325 (573)
                      -..|+++++|+.+++-..++.|++||.+ |+.+...-     .+.......+.+.+    ..+..++. .+.++.|..++
T Consensus        25 P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~i~~~~   99 (279)
T d1q7fa_          25 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR----NSGDIIVTERSPTHQIQIYN   99 (279)
T ss_dssp             EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET----TTTEEEEEECGGGCEEEEEC
T ss_pred             ccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccc----cccccceeccCCcccccccc
Confidence            4678888888866666677888888865 43322110     01111222333221    12233333 34455676666


Q ss_pred             CCCCeEEEEe-cCCCccEEEEEECCCcEEEEE-eCCCeEEEEeCCCCeeeEecc--CCcceeeEEEeccCceeEEEEcCC
Q psy2671         326 VILSQCVRVL-TSHTRSVTCIRWGGSGLIYSA-SQDRTIKVWRASDGVMCRTLE--GHAHWVNTLALSTDYLMRVEATST  401 (573)
Q Consensus       326 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~-s~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~~~~~~  401 (573)
                      .. +.....+ .........++..+++.++.+ ...+.+.+++.. +..+..+.  .+......++              
T Consensus       100 ~~-g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~--------------  163 (279)
T d1q7fa_         100 QY-GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVV--------------  163 (279)
T ss_dssp             TT-SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEE--------------
T ss_pred             cc-ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-Cceeecccccccccccceee--------------
Confidence            53 4444433 234455677888777654444 444556666643 33333321  1111112222              


Q ss_pred             CceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeee--ccccccEEEEEECCCCCEEEEee
Q psy2671         402 GGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARM--TGHQQLINCVEFSPDGRIIASAS  479 (573)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~sp~g~~las~s  479 (573)
                                             ..+++..+++....+.|++||....  .+..+  .+.......|+++|+|+++++-+
T Consensus       164 -----------------------~d~~g~i~v~d~~~~~V~~~d~~G~--~~~~~g~~g~~~~P~giavD~~G~i~Vad~  218 (279)
T d1q7fa_         164 -----------------------VNDKQEIFISDNRAHCVKVFNYEGQ--YLRQIGGEGITNYPIGVGINSNGEILIADN  218 (279)
T ss_dssp             -----------------------ECSSSEEEEEEGGGTEEEEEETTCC--EEEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred             -----------------------eccceeEEeeeccccceeeeecCCc--eeeeecccccccCCcccccccCCeEEEEEC
Confidence                                   2355677777778888999986543  22222  23444578899999999887754


Q ss_pred             C-CCcEEEEeCCCCeEEEeecC--CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccc
Q psy2671         480 F-DKSIKLWDGRIGKFITTLRG--HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKK  535 (573)
Q Consensus       480 ~-dg~i~lwd~~~~~~~~~~~~--h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~  535 (573)
                      . ++.|.+|+ ..|+.+.++..  .....+.+++.|||.+++ ++.++.|++|......
T Consensus       219 ~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         219 HNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             SSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCCC
T ss_pred             CCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeeec
Confidence            4 45799998 46887766642  233578899999997655 5678999999986643

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.87  E-value=3.2e-06  Score=76.96  Aligned_cols=142  Identities=15%  Similarity=0.285  Sum_probs=99.9

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeee--ccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeec--CCc
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARM--TGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLR--GHV  502 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~--~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~--~h~  502 (573)
                      +++..+++....+.+.+++....  .+..+  ..+......+++.++|+++++....+.|++||. .++.+.++.  ++.
T Consensus       123 ~~G~i~v~~~~~~~~~~~~~~g~--~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~  199 (279)
T d1q7fa_         123 NKGRIIVVECKVMRVIIFDQNGN--VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGIT  199 (279)
T ss_dssp             TTSCEEEEETTTTEEEEECTTSC--EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTS
T ss_pred             cCCcEEEEeeccceeeEeccCCc--eeecccccccccccceeeeccceeEEeeeccccceeeeec-CCceeeeecccccc
Confidence            45666666666677777775432  22222  334556788999999999999889999999996 466666663  345


Q ss_pred             ceEEEEEECCCCCEEEEEeC-CCcEEEEeCCccccccccc--CcCCCEEEEEEccCCCEEEEeeCCCcEEEccC
Q psy2671         503 QAVYMVAWSSDSRLLVSGSA-DSTLKVWNMKTKKIEQDLP--GHGDEVYAVDWAPDGEKVASGGKDKVLRLWQN  573 (573)
Q Consensus       503 ~~v~~v~~s~dg~~las~s~-D~~v~vwd~~~~~~~~~l~--~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~~  573 (573)
                      .....+++.++|+++++-+. ++.|.+|+. +++.+..+.  ........|++.|||+. +.++.+..|++|++
T Consensus       200 ~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l-~V~~~n~~v~~fr~  271 (279)
T d1q7fa_         200 NYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSV-VLASKDYRLYIYRY  271 (279)
T ss_dssp             CSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEE-EEEETTTEEEEEEC
T ss_pred             cCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcE-EEEeCCCeEEEEEe
Confidence            55778999999998776554 456999985 466554442  22345788999999864 55667899999974

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.80  E-value=4.1e-06  Score=75.30  Aligned_cols=144  Identities=8%  Similarity=0.034  Sum_probs=94.3

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                      +++.++++-.....+..++............+ ......++++|+|+++++...++.|..+|..................
T Consensus       107 ~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~  185 (260)
T d1rwia_         107 TQGAVYVADRGNNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPW  185 (260)
T ss_dssp             TTCCEEEEEGGGTEEEEECTTCSSCEECCCCS-CCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEE
T ss_pred             ccceeEeeccccccccccccccceeeeeeecc-cCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCc
Confidence            34555555445555666665443222211122 22346899999999988888889999999776544333334445568


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEeeCCCcEEEc
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASGGKDKVLRLW  571 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw  571 (573)
                      .+++.++|.++++....+.|..++.............-.....|++.++|..+++-..++.|+..
T Consensus       186 gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i  250 (260)
T d1rwia_         186 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL  250 (260)
T ss_dssp             EEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred             cceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEE
Confidence            89999999998888888888888875543222112223456899999999888776767777654

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.78  E-value=3e-06  Score=76.27  Aligned_cols=105  Identities=10%  Similarity=0.033  Sum_probs=68.2

Q ss_pred             CCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEE
Q psy2671         427 PEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVY  506 (573)
Q Consensus       427 ~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~  506 (573)
                      +++..+++...++.|..++......... ....-.....|+++++|+++++....+.|..++..................
T Consensus       149 ~~g~~~v~~~~~~~i~~~d~~~~~~~~~-~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~  227 (260)
T d1rwia_         149 NSGNVYVTDTDNNRVVKLEAESNNQVVL-PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPL  227 (260)
T ss_dssp             TTCCEEEEEGGGTEEEEECTTTCCEEEC-CCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEE
T ss_pred             CCCCEeeeccccccccccccccceeeee-eccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeE
Confidence            4455666666667777777654332211 112234467899999999998888888898888654432222122334567


Q ss_pred             EEEECCCCCEEEEEeCCCcEEEEeCC
Q psy2671         507 MVAWSSDSRLLVSGSADSTLKVWNMK  532 (573)
Q Consensus       507 ~v~~s~dg~~las~s~D~~v~vwd~~  532 (573)
                      .|+++++|.++++-..++.|+..+..
T Consensus       228 ~i~~d~~g~l~vad~~~~rI~~i~~~  253 (260)
T d1rwia_         228 AVAVDSDRTVYVADRGNDRVVKLTSL  253 (260)
T ss_dssp             EEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred             EEEEeCCCCEEEEECCCCEEEEEeCC
Confidence            89999999988877777777766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.75  E-value=4.8e-06  Score=78.99  Aligned_cols=111  Identities=13%  Similarity=0.151  Sum_probs=70.9

Q ss_pred             cEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeE--EE---eec--------------CCcceEEEEEECCCCCEEEEEe
Q psy2671         462 LINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKF--IT---TLR--------------GHVQAVYMVAWSSDSRLLVSGS  521 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~--~~---~~~--------------~h~~~v~~v~~s~dg~~las~s  521 (573)
                      ....++|+|+|+++.+. -.+++|.+|+...++.  +.   .+.              .+......+.++|||++|+++.
T Consensus       194 gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             ceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence            46789999999987554 4678899998765432  11   110              1223456789999999988764


Q ss_pred             C-CC-----cEEEEeCCccccc------ccccCcCCCEEEEEEcc-CCCEEEEe-eCCCcEEEcc
Q psy2671         522 A-DS-----TLKVWNMKTKKIE------QDLPGHGDEVYAVDWAP-DGEKVASG-GKDKVLRLWQ  572 (573)
Q Consensus       522 ~-D~-----~v~vwd~~~~~~~------~~l~~h~~~v~~~~~s~-d~~~l~s~-~~d~~i~iw~  572 (573)
                      . +.     .|..|++.....+      .........-.+++++| +|++|+.+ ..++.|.+|+
T Consensus       274 r~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~  338 (365)
T d1jofa_         274 RANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR  338 (365)
T ss_dssp             EESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred             ccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEE
Confidence            3 22     3777776542211      11122233456789998 78987665 5668899985

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.74  E-value=5.7e-06  Score=76.54  Aligned_cols=239  Identities=10%  Similarity=0.113  Sum_probs=134.5

Q ss_pred             cEEEEEEcCCCCeEEEEee-------CCeEEEEECCCCceecccc---cCCcccEEEEEecccccCCCCCEEEEEeCCCc
Q psy2671         251 WVLCIAWSPDSKQLVSGCK-------NGVIHAWDSSTGKQIGQPM---RGHKQWITALSWEPFHLNHQCRRFASSGKDGA  320 (573)
Q Consensus       251 ~V~~v~~s~dg~~l~sgs~-------dg~i~vwd~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~  320 (573)
                      ....++|.|+|+..++...       +|.|..||..++.......   ......-..+.+.+     +++++..++..+.
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~-----dg~~l~vad~~~~   93 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-----DANQLFVADMRLG   93 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-----SSSEEEEEETTTE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeC-----CCCEEEEEECCCe
Confidence            3567899999986665322       4679999988775422110   01112234555543     5666777776677


Q ss_pred             EEEEECCCCeEEEEecCCC----ccEEEEEECCCcEEEEEeCCCeE--------------EEEeCC-CCeeeEeccCCcc
Q psy2671         321 IRIWDVILSQCVRVLTSHT----RSVTCIRWGGSGLIYSASQDRTI--------------KVWRAS-DGVMCRTLEGHAH  381 (573)
Q Consensus       321 v~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~~l~s~s~d~~i--------------~vw~~~-~~~~~~~~~~~~~  381 (573)
                      +...+..............    .....+++.++|.++.+...+..              ++|.+. ++...... ....
T Consensus        94 i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg~~~~~~-~~~~  172 (314)
T d1pjxa_          94 LLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD-TAFQ  172 (314)
T ss_dssp             EEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE-EEES
T ss_pred             EEEEeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecCceeEee-CCcc
Confidence            8888876543222111111    12466778887766655432221              122111 11110000 0000


Q ss_pred             eeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCC-----cEEEEEeCCCeEEEEcCCCCccc----
Q psy2671         382 WVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEG-----EKLVSGSDDFTLFLWNPEKEKKS----  452 (573)
Q Consensus       382 ~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~sg~~dg~i~lwd~~~~~~~----  452 (573)
                      .-+.++++                                     |++     .+.++-+..+.|..|++......    
T Consensus       173 ~pNGi~~~-------------------------------------~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~  215 (314)
T d1pjxa_         173 FPNGIAVR-------------------------------------HMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK  215 (314)
T ss_dssp             SEEEEEEE-------------------------------------ECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEE
T ss_pred             eeeeeEEC-------------------------------------CCCCcceeEEEEEeecccceEEeeccCccccceee
Confidence            00111111                                     211     23455566777877775433221    


Q ss_pred             -eeeecc-ccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCE-EEEEeCCCcEEEE
Q psy2671         453 -LARMTG-HQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRL-LVSGSADSTLKVW  529 (573)
Q Consensus       453 -~~~~~~-h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~-las~s~D~~v~vw  529 (573)
                       ...+.+ +......+++.++|++.++....+.|.+||.+.++.+..+..+....++++|.||++. +++.+.++.|...
T Consensus       216 ~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~  295 (314)
T d1pjxa_         216 VWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF  295 (314)
T ss_dssp             EEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEE
Confidence             111111 1223467999999999888888899999999888766666655567889999999974 5666677888887


Q ss_pred             eCC
Q psy2671         530 NMK  532 (573)
Q Consensus       530 d~~  532 (573)
                      ++.
T Consensus       296 ~~~  298 (314)
T d1pjxa_         296 EWQ  298 (314)
T ss_dssp             ECS
T ss_pred             ECC
Confidence            764

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=8e-06  Score=80.01  Aligned_cols=75  Identities=15%  Similarity=0.081  Sum_probs=52.2

Q ss_pred             cEEEEEEcCCCCeEEEEe---------CCCeEEEEECCCCeeeEE--ecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEE
Q psy2671         209 AVISVKFSPNGRSLASGS---------GDTTVRFWDVTTQTPLFK--CEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWD  277 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s---------~d~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd  277 (573)
                      .+....||||+++++.+.         ..+.+.++|+.+++....  .......+....|||||+.||-.. ++.|.+.+
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~  140 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCA  140 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEES
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEe
Confidence            345677999999987764         356789999988764322  222233455678999999998754 67788888


Q ss_pred             CCCCcee
Q psy2671         278 SSTGKQI  284 (573)
Q Consensus       278 ~~~~~~~  284 (573)
                      ..++..+
T Consensus       141 ~~~~~~~  147 (465)
T d1xfda1         141 HVGKQAI  147 (465)
T ss_dssp             SSSSCCE
T ss_pred             cCCCceE
Confidence            7766543

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.63  E-value=1.1e-05  Score=76.30  Aligned_cols=73  Identities=10%  Similarity=0.042  Sum_probs=46.0

Q ss_pred             cEEEEEECCCCCEEEEeeC------CCcEEEEeCCCC-eEEE-----eecCCcceEEEEEECC-CCCEEEEEe-CCCcEE
Q psy2671         462 LINCVEFSPDGRIIASASF------DKSIKLWDGRIG-KFIT-----TLRGHVQAVYMVAWSS-DSRLLVSGS-ADSTLK  527 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~------dg~i~lwd~~~~-~~~~-----~~~~h~~~v~~v~~s~-dg~~las~s-~D~~v~  527 (573)
                      ....+.++|||++|+++..      .+.|..|+.... ....     ........-..++++| +|++|+++. .++.|.
T Consensus       256 ~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~  335 (365)
T d1jofa_         256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE  335 (365)
T ss_dssp             EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred             CccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEE
Confidence            3567889999999887632      223666765432 2111     1111222345688998 899877664 678999


Q ss_pred             EEeCCcc
Q psy2671         528 VWNMKTK  534 (573)
Q Consensus       528 vwd~~~~  534 (573)
                      +|+++..
T Consensus       336 v~~~~~~  342 (365)
T d1jofa_         336 IYRWKDE  342 (365)
T ss_dssp             EEEEETT
T ss_pred             EEEEeCC
Confidence            9987544

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=3e-05  Score=69.68  Aligned_cols=62  Identities=18%  Similarity=0.226  Sum_probs=45.5

Q ss_pred             CCcEEEEEEcCCCCeEEEEeCCC---eEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee
Q psy2671         207 AEAVISVKFSPNGRSLASGSGDT---TVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK  269 (573)
Q Consensus       207 ~~~V~~~~fsp~g~~las~s~d~---~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~  269 (573)
                      ...+.+-+|||||+.||-.....   .+.+.+..++.. .....+.....+..|+|||+.++....
T Consensus        38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~i~~~~~  102 (269)
T d2hqsa1          38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALS  102 (269)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred             CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCce-eEEeeeecccccceecCCCCeeeEeee
Confidence            45678899999999998765443   466667666544 344556677889999999998886554

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=6.7e-05  Score=73.24  Aligned_cols=61  Identities=16%  Similarity=0.309  Sum_probs=41.3

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEe-cCCCCcE-----------------EEEEEcCCCCeEEEEeeC
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKC-EGHKHWV-----------------LCIAWSPDSKQLVSGCKN  270 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~-~~h~~~V-----------------~~v~~s~dg~~l~sgs~d  270 (573)
                      .+....|||||+.+|-.. ++.+.+.+..++..+... .+....|                 .++-|||||++||....|
T Consensus       115 ~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D  193 (465)
T d1xfda1         115 KLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN  193 (465)
T ss_dssp             CCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred             ccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEec
Confidence            344567999999998876 567888887766544322 2222111                 467799999999987643

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.45  E-value=0.00012  Score=67.26  Aligned_cols=229  Identities=11%  Similarity=0.096  Sum_probs=127.0

Q ss_pred             CCcEEEEECCCCeEEEEecCC----CccEEEEEECCCc-EEEEEeCCCeEEEEeCCCCeeeEec---cCCc-ceeeEEEe
Q psy2671         318 DGAIRIWDVILSQCVRVLTSH----TRSVTCIRWGGSG-LIYSASQDRTIKVWRASDGVMCRTL---EGHA-HWVNTLAL  388 (573)
Q Consensus       318 dg~v~iwd~~~~~~~~~~~~h----~~~v~~~~~~~~~-~l~s~s~d~~i~vw~~~~~~~~~~~---~~~~-~~v~~~~~  388 (573)
                      +|.|..||..++.........    ...-..+++.+++ .++++...+.+...+...+......   .+.. ...+.+++
T Consensus        45 ~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~  124 (314)
T d1pjxa_          45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAF  124 (314)
T ss_dssp             CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEE
T ss_pred             CCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEE
Confidence            466777887766543332211    1235678888776 6888887777888887654322111   1111 12344555


Q ss_pred             ccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCCeEEEEcCCCCccceeeeccccccEEEEEE
Q psy2671         389 STDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDFTLFLWNPEKEKKSLARMTGHQQLINCVEF  468 (573)
Q Consensus       389 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~  468 (573)
                      .++..+-+.........+... .              ..       -...|.+..++.....   ..+...-..-+.++|
T Consensus       125 d~~G~lyvtd~~~~~~~~~~~-~--------------~~-------~~~~G~v~~~~~dg~~---~~~~~~~~~pNGi~~  179 (314)
T d1pjxa_         125 DYEGNLWITAPAGEVAPADYT-R--------------SM-------QEKFGSIYCFTTDGQM---IQVDTAFQFPNGIAV  179 (314)
T ss_dssp             CTTSCEEEEECBCBCTTSCCC-B--------------TT-------SSSCEEEEEECTTSCE---EEEEEEESSEEEEEE
T ss_pred             CCCCCEEEecCccCccccccc-c--------------ee-------ccCCceEEEEeecCce---eEeeCCcceeeeeEE
Confidence            554433222111000000000 0              00       0012344444433211   111112223467899


Q ss_pred             CCCCC-----EEEEeeCCCcEEEEeCCCCeEE------EeecC-CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccc
Q psy2671         469 SPDGR-----IIASASFDKSIKLWDGRIGKFI------TTLRG-HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKI  536 (573)
Q Consensus       469 sp~g~-----~las~s~dg~i~lwd~~~~~~~------~~~~~-h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~  536 (573)
                      +|++.     ++++-+..+.|..||+.....+      ..+.+ +....-.+++..+|++.++....+.|.+||.++++.
T Consensus       180 ~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~  259 (314)
T d1pjxa_         180 RHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP  259 (314)
T ss_dssp             EECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred             CCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEE
Confidence            98764     5555577888988876533221      22222 222345789999999888877788999999988877


Q ss_pred             cccccCcCCCEEEEEEccCCCEE-EEeeCCCcEEEc
Q psy2671         537 EQDLPGHGDEVYAVDWAPDGEKV-ASGGKDKVLRLW  571 (573)
Q Consensus       537 ~~~l~~h~~~v~~~~~s~d~~~l-~s~~~d~~i~iw  571 (573)
                      ...+........+++|.||++.| ++.+..+.|.-.
T Consensus       260 ~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~  295 (314)
T d1pjxa_         260 KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF  295 (314)
T ss_dssp             SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred             EEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEE
Confidence            66665555678999999999755 556666766543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.44  E-value=0.0001  Score=68.04  Aligned_cols=217  Identities=12%  Similarity=0.102  Sum_probs=122.2

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCC-----CeEEEEeCCCCeeeEeccCC--c
Q psy2671         308 QCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQD-----RTIKVWRASDGVMCRTLEGH--A  380 (573)
Q Consensus       308 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d-----~~i~vw~~~~~~~~~~~~~~--~  380 (573)
                      +++.+++-...+.|.-|+...+.....+.........+++.++|.++.+...     +.+...+...+.........  .
T Consensus        50 ~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  129 (319)
T d2dg1a1          50 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA  129 (319)
T ss_dssp             TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred             CCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceeeeeccCCCcc
Confidence            4556666666777877877666555555555556788999888876665432     22333333332222111110  0


Q ss_pred             ceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeC------CCeEEEEcCCCCcccee
Q psy2671         381 HWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSD------DFTLFLWNPEKEKKSLA  454 (573)
Q Consensus       381 ~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~------dg~i~lwd~~~~~~~~~  454 (573)
                      ...+.+++.                                     ++|.+.++...      .+.+..++....  .+.
T Consensus       130 ~~~nd~~~d-------------------------------------~~G~l~vtd~~~~~~~~~g~v~~~~~dg~--~~~  170 (319)
T d2dg1a1         130 YCIDDMVFD-------------------------------------SKGGFYFTDFRGYSTNPLGGVYYVSPDFR--TVT  170 (319)
T ss_dssp             CCEEEEEEC-------------------------------------TTSCEEEEECCCBTTBCCEEEEEECTTSC--CEE
T ss_pred             cCCcceeEE-------------------------------------eccceeecccccccccCcceeEEEecccc--eeE
Confidence            112222222                                     44444333221      123444444322  122


Q ss_pred             eeccccccEEEEEECCCCCEE-EEeeCCCcEEEEeCCCC-eEEE-------eecCCcceEEEEEECCCCCEEEEEeCCCc
Q psy2671         455 RMTGHQQLINCVEFSPDGRII-ASASFDKSIKLWDGRIG-KFIT-------TLRGHVQAVYMVAWSSDSRLLVSGSADST  525 (573)
Q Consensus       455 ~~~~h~~~v~~v~~sp~g~~l-as~s~dg~i~lwd~~~~-~~~~-------~~~~h~~~v~~v~~s~dg~~las~s~D~~  525 (573)
                      .+...-...+.++|+||++.| ++-+..+.|..||.... ....       ........-..+++.++|++.++....+.
T Consensus       171 ~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~  250 (319)
T d2dg1a1         171 PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR  250 (319)
T ss_dssp             EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE
T ss_pred             EEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCE
Confidence            222222345789999999865 45567789999986532 1111       11111123457899999998888888999


Q ss_pred             EEEEeCCccccccccc------CcCCCEEEEEEccCCCEEEEeeC
Q psy2671         526 LKVWNMKTKKIEQDLP------GHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       526 v~vwd~~~~~~~~~l~------~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                      |.+|+. .++.+..+.      ++...+++++|.+++..|.....
T Consensus       251 V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         251 VLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             EEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred             EEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence            999996 466554332      44556889999998877765543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.39  E-value=0.00032  Score=64.54  Aligned_cols=73  Identities=15%  Similarity=0.062  Sum_probs=51.1

Q ss_pred             cEEEEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee----CCeEEEEECCCC
Q psy2671         209 AVISVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK----NGVIHAWDSSTG  281 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~----dg~i~vwd~~~~  281 (573)
                      .+-.++|.++|+..++-...+.|.-|+..++...............++|++||+.+++...    .+.+...+...+
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            3457899999997777778899999998876555444445556789999999987666433    233444454443

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.83  E-value=0.0014  Score=58.47  Aligned_cols=67  Identities=10%  Similarity=0.162  Sum_probs=49.1

Q ss_pred             EcCC--CCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEee-CC-----eEEEEECCCCce
Q psy2671         215 FSPN--GRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCK-NG-----VIHAWDSSTGKQ  283 (573)
Q Consensus       215 fsp~--g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~-dg-----~i~vwd~~~~~~  283 (573)
                      .|||  |+.+|-.+ ++.|.+.|+.+++.. .+..+...+...+|||||++||.... ++     .|.+.+..++..
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~   80 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI   80 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence            5788  99888765 456888899887754 45566677889999999999986543 22     467777777654

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.65  E-value=0.019  Score=51.44  Aligned_cols=218  Identities=12%  Similarity=0.119  Sum_probs=124.0

Q ss_pred             EEEEcCCCCeE-EEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         254 CIAWSPDSKQL-VSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       254 ~v~~s~dg~~l-~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      +..|.+....| .+--..+.|..||..+++.....+   ...+.++.+.+     +++.++ ++.+ .+..+|..+++..
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~~---~~~~~~i~~~~-----dg~l~v-a~~~-gl~~~d~~tg~~~   91 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKTVHAL---PFMGSALAKIS-----DSKQLI-ASDD-GLFLRDTATGVLT   91 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC---SSCEEEEEEEE-----TTEEEE-EETT-EEEEEETTTCCEE
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEEC---CCCcEEEEEec-----CCCEEE-EEeC-ccEEeecccceee
Confidence            34566543333 343456778888887775432111   23455555432     444444 4555 4788898887654


Q ss_pred             EEecC----CCccEEEEEECCCcEEEEEeCC-----CeEEEEeCCCCeeeEeccCCcceeeEEEeccCceeEEEEcCCCc
Q psy2671         333 RVLTS----HTRSVTCIRWGGSGLIYSASQD-----RTIKVWRASDGVMCRTLEGHAHWVNTLALSTDYLMRVEATSTGG  403 (573)
Q Consensus       333 ~~~~~----h~~~v~~~~~~~~~~l~s~s~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~  403 (573)
                      .....    ....+..+.+.++|.++.++.+     +.-.+|.+..+.......+ ...-+.++                
T Consensus        92 ~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-~~~~Ng~~----------------  154 (295)
T d2ghsa1          92 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-ISIPNSIC----------------  154 (295)
T ss_dssp             EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-ESSEEEEE----------------
T ss_pred             EEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeec-cCCcceee----------------
Confidence            43221    1235677888888877666532     2234444444432221111 00111122                


Q ss_pred             eeeCCCCchhhhhhhhhheeeeCCCCc-EEEEEeCCCeEEEEcCCCCc-------cceeeeccccccEEEEEECCCCCEE
Q psy2671         404 FKYDPANPEESSKHALAKYQAQCPEGE-KLVSGSDDFTLFLWNPEKEK-------KSLARMTGHQQLINCVEFSPDGRII  475 (573)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~lwd~~~~~-------~~~~~~~~h~~~v~~v~~sp~g~~l  475 (573)
                                           .+++++ ++++.+..+.|..+++....       .......+.......++++.+|++.
T Consensus       155 ---------------------~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlW  213 (295)
T d2ghsa1         155 ---------------------FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW  213 (295)
T ss_dssp             ---------------------ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred             ---------------------ecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEE
Confidence                                 234454 44555667788877654221       1112223334457789999999988


Q ss_pred             EEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEEC-CCCCEEEEE
Q psy2671         476 ASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWS-SDSRLLVSG  520 (573)
Q Consensus       476 as~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s-~dg~~las~  520 (573)
                      ++.-..+.|..||. .|+.+..+.-....+++++|- +|.+.|+..
T Consensus       214 va~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT  258 (295)
T d2ghsa1         214 NARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT  258 (295)
T ss_dssp             EEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred             eeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence            87777889999995 578888776655678999996 676655543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.62  E-value=0.021  Score=51.13  Aligned_cols=202  Identities=11%  Similarity=0.087  Sum_probs=115.4

Q ss_pred             CCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEeccC--C--cceeeEEEeccCc
Q psy2671         317 KDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLEG--H--AHWVNTLALSTDY  392 (573)
Q Consensus       317 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~~--~--~~~v~~~~~s~~~  392 (573)
                      ..+.|.-||..+++... +. ....+.++++.+++.++.++.+ .+..+|..+++.......  .  ....+.+.+.   
T Consensus        38 ~~~~I~r~d~~~g~~~~-~~-~~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd---  111 (295)
T d2ghsa1          38 LERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMH---  111 (295)
T ss_dssp             GGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEEC---
T ss_pred             CCCEEEEEECCCCeEEE-EE-CCCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeEEeeeecCCCcccceeeEEC---
Confidence            44567777776665432 11 1345778888778877777765 578888887765332211  0  1122333333   


Q ss_pred             eeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCC----CeEEEEcCCCCccceeeeccccccEEEEEE
Q psy2671         393 LMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDD----FTLFLWNPEKEKKSLARMTGHQQLINCVEF  468 (573)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d----g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~  468 (573)
                                                        |+|.+.++....    +.-.+|....+.  ...+...-..-+.++|
T Consensus       112 ----------------------------------~~G~iw~~~~~~~~~~~~g~l~~~~~g~--~~~~~~~~~~~Ng~~~  155 (295)
T d2ghsa1         112 ----------------------------------PSGALWIGTMGRKAETGAGSIYHVAKGK--VTKLFADISIPNSICF  155 (295)
T ss_dssp             ----------------------------------TTSCEEEEEEETTCCTTCEEEEEEETTE--EEEEEEEESSEEEEEE
T ss_pred             ----------------------------------CCCCEEEEeccccccccceeEeeecCCc--EEEEeeccCCcceeee
Confidence                                              334433332211    122233322221  1111112234578999


Q ss_pred             CCCCCEEE-EeeCCCcEEEEeCCC--C----e--EEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccc
Q psy2671         469 SPDGRIIA-SASFDKSIKLWDGRI--G----K--FITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQD  539 (573)
Q Consensus       469 sp~g~~la-s~s~dg~i~lwd~~~--~----~--~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~  539 (573)
                      +++++.+. +-+..+.|..++...  +    +  ....+.+.......+++..+|++.++.-..+.|..||. .++.+..
T Consensus       156 s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~  234 (295)
T d2ghsa1         156 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIAR  234 (295)
T ss_dssp             CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEE
T ss_pred             cCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeE
Confidence            99998654 555678888887532  1    1  12223344456778899999988777667788999996 4666665


Q ss_pred             ccCcCCCEEEEEEc-cCCCEEEE
Q psy2671         540 LPGHGDEVYAVDWA-PDGEKVAS  561 (573)
Q Consensus       540 l~~h~~~v~~~~~s-~d~~~l~s  561 (573)
                      +.--...+++++|- +|.+.|..
T Consensus       235 i~lP~~~~T~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         235 YEVPGKQTTCPAFIGPDASRLLV  257 (295)
T ss_dssp             EECSCSBEEEEEEESTTSCEEEE
T ss_pred             ecCCCCceEEEEEeCCCCCEEEE
Confidence            54444579999996 67666653

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.56  E-value=0.017  Score=54.01  Aligned_cols=116  Identities=16%  Similarity=0.129  Sum_probs=67.8

Q ss_pred             EEEEcCCCCeEEEEeCCC-----------eEEEEECCCCeee--E-EecCCCCcEEEEEEcCCCCeEEEEeeC-CeEEEE
Q psy2671         212 SVKFSPNGRSLASGSGDT-----------TVRFWDVTTQTPL--F-KCEGHKHWVLCIAWSPDSKQLVSGCKN-GVIHAW  276 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d~-----------~i~iwd~~~~~~~--~-~~~~h~~~V~~v~~s~dg~~l~sgs~d-g~i~vw  276 (573)
                      ......+|+.++.|+.+.           .+.+||..+++-.  . ....|.....+.++.++|..++.|+.+ ..+.+|
T Consensus        24 ~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~y  103 (387)
T d1k3ia3          24 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY  103 (387)
T ss_dssp             EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred             EEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEe
Confidence            344456888888887431           3779999876422  1 122333334566788999988888765 589999


Q ss_pred             ECCCCceecccccCCcccEEEEEecccccCCCCCEEEEEeCC------CcEEEEECCCCeEE
Q psy2671         277 DSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKD------GAIRIWDVILSQCV  332 (573)
Q Consensus       277 d~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~  332 (573)
                      |..+..-..........+-...+     ...+++.++.++.+      ..+.+||..+..-.
T Consensus       104 d~~~~~w~~~~~~~~~r~~~~~~-----~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~  160 (387)
T d1k3ia3         104 DSSSDSWIPGPDMQVARGYQSSA-----TMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT  160 (387)
T ss_dssp             EGGGTEEEECCCCSSCCSSCEEE-----ECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred             cCccCccccccccccccccccee-----eecCCceeeeccccccccccceeeeecCCCCcee
Confidence            98765432111111111111111     12356777777643      35889998876543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.40  E-value=0.027  Score=55.54  Aligned_cols=110  Identities=15%  Similarity=0.097  Sum_probs=62.5

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCCC----------cE-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHKH----------WV-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~~----------~V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      .|..++.++.|.-.|.++|+.+.++.....          .+ ..++.  .+..++.+..++.+.-.|..+|+.+.....
T Consensus        68 ~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~g~l~Alda~tG~~~w~~~~  145 (560)
T d1kv9a2          68 VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQQT  145 (560)
T ss_dssp             EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             EEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcce--eCCeEEEEeCCCEEEEEECCCCcEEeccCc
Confidence            566677888888889999998887532210          00 11121  244688889999999999999987644321


Q ss_pred             CCcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEe
Q psy2671         290 GHKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       290 ~h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~  335 (573)
                      .....-..+.-.|..   ....++.++      ..|.|+-+|..+++.+-.+
T Consensus       146 ~~~~~~~~~~~~p~v---~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  194 (560)
T d1kv9a2         146 TDPAKPYSITGAPRV---VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF  194 (560)
T ss_dssp             SCTTSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             cCcccceeeeeeeee---ecCcccccccceeccccceEEEEECCCceEEeee
Confidence            111000000001100   012233322      2367899999999877654

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.36  E-value=0.024  Score=56.24  Aligned_cols=75  Identities=20%  Similarity=0.256  Sum_probs=46.5

Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCccccccccc----CcCCCEEEEEEccCCC
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLP----GHGDEVYAVDWAPDGE  557 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~----~h~~~v~~~~~s~d~~  557 (573)
                      |.+.-||..+++.+...... .+...=..+..|.++..|+.|+.++-+|.++++.+-+..    .+..+   +.|..||+
T Consensus       453 G~l~A~D~~TG~~~W~~~~~-~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P---~tY~~dGk  528 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYP---MTYTHKGT  528 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTE
T ss_pred             ceEEEEeCCCCceecccCCC-CCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCC---eEEEECCE
Confidence            46777888888766543211 111111123357788889999999999999999875442    22334   34556886


Q ss_pred             E-EE
Q psy2671         558 K-VA  560 (573)
Q Consensus       558 ~-l~  560 (573)
                      + ++
T Consensus       529 QYva  532 (596)
T d1w6sa_         529 QYVA  532 (596)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4 44

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.31  E-value=0.023  Score=56.18  Aligned_cols=76  Identities=21%  Similarity=0.229  Sum_probs=45.5

Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccc--cC--cCCCEEEEEEccCCC
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDL--PG--HGDEVYAVDWAPDGE  557 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l--~~--h~~~v~~~~~s~d~~  557 (573)
                      |.+.-+|+.+|+.+.....-. ...+=..+..+.++++|+.|+.++-+|.++++.+-+.  .+  +..+   +.|..||+
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~-~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P---~ty~~dGk  519 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP---MTYSFKGK  519 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTE
T ss_pred             ccEEEeccCCCceeeEcCCCC-CCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecc---eEEEECCE
Confidence            456677777877665443110 1110011224667888999999999999999987443  32  2223   45666886


Q ss_pred             E-EEE
Q psy2671         558 K-VAS  561 (573)
Q Consensus       558 ~-l~s  561 (573)
                      + ++.
T Consensus       520 qYi~v  524 (571)
T d2ad6a1         520 QYIGS  524 (571)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            4 443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.06  E-value=0.081  Score=48.66  Aligned_cols=67  Identities=15%  Similarity=0.146  Sum_probs=43.9

Q ss_pred             EEEEECCCCCEEEEEe-CCCcEEEEeCCccccc--------ccc---cCcCCCEEEEEEccCCCEEEEeeCCCcEEEcc
Q psy2671         506 YMVAWSSDSRLLVSGS-ADSTLKVWNMKTKKIE--------QDL---PGHGDEVYAVDWAPDGEKVASGGKDKVLRLWQ  572 (573)
Q Consensus       506 ~~v~~s~dg~~las~s-~D~~v~vwd~~~~~~~--------~~l---~~h~~~v~~~~~s~d~~~l~s~~~d~~i~iw~  572 (573)
                      ..+.++|||+++++++ .+.++.|+|++.-..+        ..+   ....-.-...+|..+|.-..|---|..|--|+
T Consensus       278 HGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~  356 (459)
T d1fwxa2         278 HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWN  356 (459)
T ss_dssp             CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred             CceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccCcCccccccCCCceEEEEeeccceEEEEe
Confidence            3578999999987765 6899999999642211        000   11122335667888776555666888888886

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.02  E-value=0.012  Score=55.11  Aligned_cols=71  Identities=13%  Similarity=0.141  Sum_probs=48.1

Q ss_pred             EEEEcCCCCeEEEEeCC-CeEEEEECCCCeeeEEecC-CCCcEEEEEEcCCCCeEEEEeeC------CeEEEEECCCCc
Q psy2671         212 SVKFSPNGRSLASGSGD-TTVRFWDVTTQTPLFKCEG-HKHWVLCIAWSPDSKQLVSGCKN------GVIHAWDSSTGK  282 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d-~~i~iwd~~~~~~~~~~~~-h~~~V~~v~~s~dg~~l~sgs~d------g~i~vwd~~~~~  282 (573)
                      +.++.++|+.++.|+.+ ..+.+||..+..-...-.. ....-.+.+..+||+.++.|+.+      ..+.+||+.+..
T Consensus        80 ~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3          80 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             EEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            45688999998888755 5899999887653221111 11222456777899988888753      368999987754

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=97.01  E-value=0.0023  Score=56.99  Aligned_cols=95  Identities=18%  Similarity=0.190  Sum_probs=64.5

Q ss_pred             EECCC--CCEEEEeeCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeC-CC-----cEEEEeCCcccccc
Q psy2671         467 EFSPD--GRIIASASFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSA-DS-----TLKVWNMKTKKIEQ  538 (573)
Q Consensus       467 ~~sp~--g~~las~s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~-D~-----~v~vwd~~~~~~~~  538 (573)
                      ..|||  |+.+|-.+ +|.|.+.|+..++.. .|..+.......+|||||+.||-.+. ++     .|.+++..+++..+
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~   82 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKR   82 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEE
Confidence            35788  99888654 567888899888754 45555667888999999999885432 21     37777777766543


Q ss_pred             ccc------CcCCCEEEEEEccCCCEEEEee
Q psy2671         539 DLP------GHGDEVYAVDWAPDGEKVASGG  563 (573)
Q Consensus       539 ~l~------~h~~~v~~~~~s~d~~~l~s~~  563 (573)
                      ...      ..........|+|||+.|+...
T Consensus        83 lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~  113 (281)
T d1k32a2          83 ITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  113 (281)
T ss_dssp             CCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             eeecCCCccCccccccccccCCCCCEEEEEE
Confidence            211      1112346788999999988653

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.92  E-value=0.23  Score=48.89  Aligned_cols=75  Identities=20%  Similarity=0.392  Sum_probs=49.3

Q ss_pred             CcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC----cCCCEEEEEEccCCC
Q psy2671         482 KSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG----HGDEVYAVDWAPDGE  557 (573)
Q Consensus       482 g~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~----h~~~v~~~~~s~d~~  557 (573)
                      |.+.-+|+.+|+.+...+.+. ++..-..+..|.++.+|+.|+.++-+|.++|+.+-+.+-    +..+   +.|..||+
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~-p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P---~ty~~~G~  541 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPP---ITWEQDGE  541 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETTE
T ss_pred             CeEEEEcCCCCcEEeecCCCC-CCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccC---EEEEECCE
Confidence            567778888888776654321 121112234677888899999999999999998854432    2233   46677886


Q ss_pred             E-EE
Q psy2671         558 K-VA  560 (573)
Q Consensus       558 ~-l~  560 (573)
                      + ++
T Consensus       542 qYv~  545 (582)
T d1flga_         542 QYLG  545 (582)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            4 44

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=96.79  E-value=0.11  Score=51.21  Aligned_cols=109  Identities=17%  Similarity=0.159  Sum_probs=63.1

Q ss_pred             eEEEEeCCCeEEEEECCCCeeeEEecCCC----------CcE-EEEEEcCCCCeEEEEeeCCeEEEEECCCCceeccccc
Q psy2671         221 SLASGSGDTTVRFWDVTTQTPLFKCEGHK----------HWV-LCIAWSPDSKQLVSGCKNGVIHAWDSSTGKQIGQPMR  289 (573)
Q Consensus       221 ~las~s~d~~i~iwd~~~~~~~~~~~~h~----------~~V-~~v~~s~dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~  289 (573)
                      .|..++.++.|.-.|.++|+.+.+++...          ..+ ..+++.  +..++.++.|+.+.-.|..+|+.+.+...
T Consensus        79 ~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~~~  156 (573)
T d1kb0a2          79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQNT  156 (573)
T ss_dssp             EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEET
T ss_pred             EEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceecccC
Confidence            56677788889999999999888764211          001 122222  33577788899999889999987643211


Q ss_pred             --CCcccEEEEEecccccCCCCCEEEEEe------CCCcEEEEECCCCeEEEEe
Q psy2671         290 --GHKQWITALSWEPFHLNHQCRRFASSG------KDGAIRIWDVILSQCVRVL  335 (573)
Q Consensus       290 --~h~~~v~~~~~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~  335 (573)
                        +....+. +.-.|..   ....++.++      ..|.|+-+|..+++.+-.+
T Consensus       157 ~~~~~~~~~-~~~~p~v---~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  206 (573)
T d1kb0a2         157 FEGQKGSLT-ITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (573)
T ss_dssp             TTTCCSSCB-CCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             ccCCcceEE-eecceEE---EeccEEEeeccccccccceEEEEecCCccceeee
Confidence              1111110 0001100   112344432      2467999999999877654

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.05  E-value=0.75  Score=44.79  Aligned_cols=78  Identities=13%  Similarity=0.114  Sum_probs=45.8

Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecCC----cceEEEEEECCCC
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRGH----VQAVYMVAWSSDS  514 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~h----~~~v~~v~~s~dg  514 (573)
                      |.+.-+|+.+++..-....+... ... ..+-.+.++.+|+.||.++-+|.++|+.+..++-.    ..+   +.|..||
T Consensus       444 G~l~AiD~~TG~~~W~~~~~~~~-~~g-~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P---~ty~~dG  518 (571)
T d2ad6a1         444 GQIRAFDLTTGKAKWTKWEKFAA-WGG-TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP---MTYSFKG  518 (571)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCC-CSB-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC---EEEEETT
T ss_pred             ccEEEeccCCCceeeEcCCCCCC-Ccc-eeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecc---eEEEECC
Confidence            46777777766544332222110 000 11123557778999999999999999998776422    223   3445577


Q ss_pred             C-EEEEEe
Q psy2671         515 R-LLVSGS  521 (573)
Q Consensus       515 ~-~las~s  521 (573)
                      + |+++..
T Consensus       519 kqYi~v~~  526 (571)
T d2ad6a1         519 KQYIGSMY  526 (571)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEe
Confidence            6 555543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.10  E-value=1.3  Score=41.16  Aligned_cols=63  Identities=25%  Similarity=0.359  Sum_probs=40.7

Q ss_pred             CCCCcEEEEEEcCCCCeEEEE-eC----CCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         205 GHAEAVISVKFSPNGRSLASG-SG----DTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       205 gh~~~V~~~~fsp~g~~las~-s~----d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                      ++.-.+..+++|||++++|-+ +.    -.++++.|+.+++.+...... .....++|++|++.|+-..
T Consensus       122 ~~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-~~~~~~~W~~D~~~~~Y~~  189 (430)
T d1qfma1         122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNA  189 (430)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEE
T ss_pred             cccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc-ccccceEEcCCCCEEEEEE
Confidence            333345567789999998744 22    247999999999865322111 0114578999999876543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=95.01  E-value=1.8  Score=42.21  Aligned_cols=77  Identities=9%  Similarity=0.107  Sum_probs=46.5

Q ss_pred             CeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEEEeecC----CcceEEEEEECCCC
Q psy2671         439 FTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASASFDKSIKLWDGRIGKFITTLRG----HVQAVYMVAWSSDS  514 (573)
Q Consensus       439 g~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~~~~~~----h~~~v~~v~~s~dg  514 (573)
                      |.+.-||+.+++..-....+.  ...+=.++-.|.++..|+.||.++-+|.++|+.+..++-    +..++   .|.-||
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~--~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~---tY~~dG  527 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPM---TYTHKG  527 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCE---EEEETT
T ss_pred             ceEEEEeCCCCceecccCCCC--CCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCe---EEEECC
Confidence            567777877765433322211  111111223467888899999999999999999977653    22333   344577


Q ss_pred             C-EEEEE
Q psy2671         515 R-LLVSG  520 (573)
Q Consensus       515 ~-~las~  520 (573)
                      + |+|..
T Consensus       528 kQYvav~  534 (596)
T d1w6sa_         528 TQYVAIY  534 (596)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
Confidence            6 55543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.70  E-value=1.1  Score=38.40  Aligned_cols=218  Identities=10%  Similarity=0.017  Sum_probs=109.4

Q ss_pred             cEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEEC--CCcEEEEEeCCCeEEEEeCCCCe
Q psy2671         294 WITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWG--GSGLIYSASQDRTIKVWRASDGV  371 (573)
Q Consensus       294 ~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~--~~~~l~s~s~d~~i~vw~~~~~~  371 (573)
                      .+.+++|.+.    ..+.+.+-..++.|+..++........+......+.++++.  .+...++-...+.|.+.++....
T Consensus        37 ~~~~ld~D~~----~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~  112 (263)
T d1npea_          37 VIIGLAFDCV----DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ  112 (263)
T ss_dssp             EEEEEEEETT----TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred             cEEEEEEEeC----CCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCce
Confidence            4556666542    23345555667778877776555544444434556777764  33344455667788888876433


Q ss_pred             eeEeccCCcceeeEEEeccCceeEEEEcCCCceeeCCCCchhhhhhhhhheeeeCCCCcEEEEEeCCC--eEEEEcCCCC
Q psy2671         372 MCRTLEGHAHWVNTLALSTDYLMRVEATSTGGFKYDPANPEESSKHALAKYQAQCPEGEKLVSGSDDF--TLFLWNPEKE  449 (573)
Q Consensus       372 ~~~~~~~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~lwd~~~~  449 (573)
                      ..............+++.+..                                    |..+.+-...+  .|..-++...
T Consensus       113 ~~~l~~~~l~~p~~l~vdp~~------------------------------------g~ly~t~~~~~~~~I~r~~~dG~  156 (263)
T d1npea_         113 RRVLFDTGLVNPRGIVTDPVR------------------------------------GNLYWTDWNRDNPKIETSHMDGT  156 (263)
T ss_dssp             CEEEECSSCSSEEEEEEETTT------------------------------------TEEEEEECCSSSCEEEEEETTSC
T ss_pred             EEEEecccccCCcEEEEeccc------------------------------------CcEEEeecCCCCcEEEEecCCCC
Confidence            221122211223334333211                                    11111211111  1222222211


Q ss_pred             ccceeeeccccccEEEEEECCCCCEEEEe-eCCCcEEEEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCCCcEEE
Q psy2671         450 KKSLARMTGHQQLINCVEFSPDGRIIASA-SFDKSIKLWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSADSTLKV  528 (573)
Q Consensus       450 ~~~~~~~~~h~~~v~~v~~sp~g~~las~-s~dg~i~lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D~~v~v  528 (573)
                      .. .......-.....+++++.++.|..+ ...+.|...|.........+.+-.. ...+++. ++.+..+-...+.|..
T Consensus       157 ~~-~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~-P~~lav~-~~~lYwtd~~~~~I~~  233 (263)
T d1npea_         157 NR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAVTSY-GKNLYYTDWKTNSVIA  233 (263)
T ss_dssp             CC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEEEEE-TTEEEEEETTTTEEEE
T ss_pred             Cc-eeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCC-cEEEEEE-CCEEEEEECCCCEEEE
Confidence            11 11111122345789999877766554 4667898888865443333443322 3467765 3444445456678888


Q ss_pred             EeCCccccccccc-CcCCCEEEEEEcc
Q psy2671         529 WNMKTKKIEQDLP-GHGDEVYAVDWAP  554 (573)
Q Consensus       529 wd~~~~~~~~~l~-~h~~~v~~~~~s~  554 (573)
                      .|..+++....+. ........++..+
T Consensus       234 ~~~~~g~~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         234 MDLAISKEMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             EETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             EECCCCccceEECCCCCCCcceEEEeC
Confidence            8888777654432 2333444554443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.76  E-value=1.8  Score=37.11  Aligned_cols=163  Identities=12%  Similarity=-0.045  Sum_probs=94.6

Q ss_pred             cEEEEEEcCCCCeEEEE-eCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEe--eCCeEEEEECCCCceec
Q psy2671         209 AVISVKFSPNGRSLASG-SGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGC--KNGVIHAWDSSTGKQIG  285 (573)
Q Consensus       209 ~V~~~~fsp~g~~las~-s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs--~dg~i~vwd~~~~~~~~  285 (573)
                      .+..+++.+.+..|.-+ ...+.|.+.++..................+++.|...+|+-..  ..+.|...++...... 
T Consensus        78 ~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~-  156 (266)
T d1ijqa1          78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-  156 (266)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-
T ss_pred             CcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee-
Confidence            34578887766655544 5667899999887654444444455678899998666665443  3345666666543221 


Q ss_pred             ccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEec--CCCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671         286 QPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLT--SHTRSVTCIRWGGSGLIYSASQDRTIK  363 (573)
Q Consensus       286 ~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~l~s~s~d~~i~  363 (573)
                      ......-....++++.+.    .++...+-+..+.|...++..........  ........+++..+...++-..++.|.
T Consensus       157 ~l~~~~~~~p~gl~iD~~----~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~  232 (266)
T d1ijqa1         157 SLVTENIQWPNGITLDLL----SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF  232 (266)
T ss_dssp             EEECSSCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEE
T ss_pred             cccccccceeeEEEeecc----ccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEE
Confidence            112222244566766542    23344555667788888876543333322  222345667776555555555678887


Q ss_pred             EEeCCCCeeeEec
Q psy2671         364 VWRASDGVMCRTL  376 (573)
Q Consensus       364 vw~~~~~~~~~~~  376 (573)
                      ..+..++.....+
T Consensus       233 ~~~~~~g~~~~~~  245 (266)
T d1ijqa1         233 SANRLTGSDVNLL  245 (266)
T ss_dssp             EEETTTCCCCEEE
T ss_pred             EEECCCCcceEEE
Confidence            7777666544433

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.44  E-value=2.1  Score=41.46  Aligned_cols=106  Identities=17%  Similarity=0.106  Sum_probs=57.4

Q ss_pred             eEEEEeeCCeEEEEECCCCceecccccC------Cc---ccEE-EEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy2671         263 QLVSGCKNGVIHAWDSSTGKQIGQPMRG------HK---QWIT-ALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCV  332 (573)
Q Consensus       263 ~l~sgs~dg~i~vwd~~~~~~~~~~~~~------h~---~~v~-~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  332 (573)
                      .|+.++.++.|.-+|.++|+.+.+.-..      +.   ..+. .+.       .....+..++.|+.+.-.|..+++.+
T Consensus        79 ~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~-------~~~~~v~~~t~~g~l~alda~tG~~~  151 (573)
T d1kb0a2          79 IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVA-------LWKGKVYVGAWDGRLIALDAATGKEV  151 (573)
T ss_dssp             EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCE-------EETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             EEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccce-------EECCcEEEEecccceeeeccccccce
Confidence            5667777788888888888776432110      00   0000 000       01234566777888888888888776


Q ss_pred             EEecC--CCc-cE--EEEEECCCcEEEEEeC------CCeEEEEeCCCCeeeEe
Q psy2671         333 RVLTS--HTR-SV--TCIRWGGSGLIYSASQ------DRTIKVWRASDGVMCRT  375 (573)
Q Consensus       333 ~~~~~--h~~-~v--~~~~~~~~~~l~s~s~------d~~i~vw~~~~~~~~~~  375 (573)
                      .....  +.. .+  +....--.+.++.++.      .|.|.-+|.++|+.+=.
T Consensus       152 W~~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~  205 (573)
T d1kb0a2         152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWR  205 (573)
T ss_dssp             EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             ecccCccCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceee
Confidence            54322  111 11  1000001344555432      46799999999987643

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=92.76  E-value=1.4  Score=40.26  Aligned_cols=96  Identities=8%  Similarity=-0.075  Sum_probs=59.1

Q ss_pred             CCCcEEEEEe-CCCeEEEEcCCCCccceeeeccccccEEEEEECC--CCCEEEEeeCCC------------------cEE
Q psy2671         427 PEGEKLVSGS-DDFTLFLWNPEKEKKSLARMTGHQQLINCVEFSP--DGRIIASASFDK------------------SIK  485 (573)
Q Consensus       427 ~~~~~l~sg~-~dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp--~g~~las~s~dg------------------~i~  485 (573)
                      ++|+++.... .+..|.+.|+...+............+..++..+  +-.+++.++.+.                  .+.
T Consensus        97 yDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t  176 (459)
T d1fwxa2          97 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  176 (459)
T ss_dssp             EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEE
T ss_pred             cceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEEE
Confidence            3566665554 6678888888765432111112234466666654  455777766532                  366


Q ss_pred             EEeCCCCeEEEeecCCcceEEEEEECCCCCEEEEEeCC
Q psy2671         486 LWDGRIGKFITTLRGHVQAVYMVAWSSDSRLLVSGSAD  523 (573)
Q Consensus       486 lwd~~~~~~~~~~~~h~~~v~~v~~s~dg~~las~s~D  523 (573)
                      ..|..+.+....+... .....+++++||+++++.+.+
T Consensus       177 ~ID~~tm~V~~QV~V~-g~ld~~~~s~dGK~af~TsyN  213 (459)
T d1fwxa2         177 AVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYN  213 (459)
T ss_dssp             EEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESC
T ss_pred             EEecCCceEEEEeeeC-CChhccccCCCCCEEEEEecc
Confidence            7888888766554322 234467999999999988754

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.24  E-value=3  Score=35.55  Aligned_cols=163  Identities=10%  Similarity=-0.003  Sum_probs=93.4

Q ss_pred             CcEEEEEEcCCCCeEE-EEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeC-Ce--EEEEECCCCce
Q psy2671         208 EAVISVKFSPNGRSLA-SGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKN-GV--IHAWDSSTGKQ  283 (573)
Q Consensus       208 ~~V~~~~fsp~g~~la-s~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~d-g~--i~vwd~~~~~~  283 (573)
                      ..+.++++..-+..|. +-...+.|.+.++..................+++.|...+|+-.... +.  |..-++.....
T Consensus        79 ~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~  158 (263)
T d1npea_          79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR  158 (263)
T ss_dssp             CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC
T ss_pred             ccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCc
Confidence            3577888887666665 44566799999987654332233333567899999977777644332 23  43334443222


Q ss_pred             ecccccCCcccEEEEEecccccCCCCCEEEEEeCCCcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEE
Q psy2671         284 IGQPMRGHKQWITALSWEPFHLNHQCRRFASSGKDGAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIK  363 (573)
Q Consensus       284 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~  363 (573)
                      . ......-....++++.+.    ..+.+.+-...+.|...++........+.+-. ....+++..+...++-...+.|.
T Consensus       159 ~-~i~~~~~~~P~glaiD~~----~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~-~P~~lav~~~~lYwtd~~~~~I~  232 (263)
T d1npea_         159 R-ILAQDNLGLPNGLTFDAF----SSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ-YPFAVTSYGKNLYYTDWKTNSVI  232 (263)
T ss_dssp             E-EEECTTCSCEEEEEEETT----TTEEEEEETTTTEEEEEETTEEEEEEEEECCC-SEEEEEEETTEEEEEETTTTEEE
T ss_pred             e-eeeeecccccceEEEeec----CcEEEEEeCCCCEEEEEECCCCCeEEEECCCC-CcEEEEEECCEEEEEECCCCEEE
Confidence            1 111122234566766542    22344555567788888886554443444322 34567766444445555678888


Q ss_pred             EEeCCCCeeeEec
Q psy2671         364 VWRASDGVMCRTL  376 (573)
Q Consensus       364 vw~~~~~~~~~~~  376 (573)
                      ..+..++.....+
T Consensus       233 ~~~~~~g~~~~~~  245 (263)
T d1npea_         233 AMDLAISKEMDTF  245 (263)
T ss_dssp             EEETTTTEEEEEE
T ss_pred             EEECCCCccceEE
Confidence            8888877765543

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.79  E-value=3.5  Score=35.48  Aligned_cols=66  Identities=11%  Similarity=0.238  Sum_probs=43.9

Q ss_pred             EEEEcCCCCeEEEEeCCCeEEEEECCCCeeeEEecCCCCcEEEEEEcCCCCeEEEEeeCCeEEEEECCCC
Q psy2671         212 SVKFSPNGRSLASGSGDTTVRFWDVTTQTPLFKCEGHKHWVLCIAWSPDSKQLVSGCKNGVIHAWDSSTG  281 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d~~i~iwd~~~~~~~~~~~~h~~~V~~v~~s~dg~~l~sgs~dg~i~vwd~~~~  281 (573)
                      +.-.+|..+.||--+ ..++.++|+++.+.+....-.+. |.-=.|-.+. .|+-.+ +..|.-|+++..
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~e~-VvfWkWis~~-~L~lVT-~taVYHW~~~g~  132 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD-VTFWKWISLN-TVALVT-DNAVYHWSMEGE  132 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSC-CCEEEESSSS-EEEEEC-SSEEEEEESSSS
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcCCC-cEEEEecCCC-EEEEEc-CCceEEEcccCC
Confidence            344678888777766 45899999999988877665554 3334565443 343332 346999998643

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.42  E-value=6.6  Score=36.09  Aligned_cols=57  Identities=9%  Similarity=0.170  Sum_probs=36.5

Q ss_pred             EEEEcCCCCeEEEEeCC----------------CeEEEEECCCCe----eeEEecCCCCcEEEEEEcCCCCeEEEEe
Q psy2671         212 SVKFSPNGRSLASGSGD----------------TTVRFWDVTTQT----PLFKCEGHKHWVLCIAWSPDSKQLVSGC  268 (573)
Q Consensus       212 ~~~fsp~g~~las~s~d----------------~~i~iwd~~~~~----~~~~~~~h~~~V~~v~~s~dg~~l~sgs  268 (573)
                      .++|++|++.|+-...|                ..|..|.+.+..    .++........+..+..++|+++++...
T Consensus       175 ~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~  251 (430)
T d1qfma1         175 CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI  251 (430)
T ss_dssp             CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             ceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEe
Confidence            46789999887655432                257777776642    2333233345677788899999876443

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=90.33  E-value=2  Score=41.47  Aligned_cols=58  Identities=14%  Similarity=0.230  Sum_probs=37.5

Q ss_pred             CcEEEEECCCCeEEEEecCCCccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEec
Q psy2671         319 GAIRIWDVILSQCVRVLTSHTRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTL  376 (573)
Q Consensus       319 g~v~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~  376 (573)
                      |.+.-||+.+++.+-.................++++.|+.|+.++-+|.++|+.+-++
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~  495 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQF  495 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEE
Confidence            4577778888776654332111111111124568889999999999999999877443

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=88.05  E-value=5.6  Score=32.11  Aligned_cols=231  Identities=13%  Similarity=0.150  Sum_probs=120.6

Q ss_pred             CCCeEEEEeeCCeEEEEECCCCceecccccCCcccEEEEEecccccCCCCCEEEE------EeCCCcEEEEECCCCeEEE
Q psy2671         260 DSKQLVSGCKNGVIHAWDSSTGKQIGQPMRGHKQWITALSWEPFHLNHQCRRFAS------SGKDGAIRIWDVILSQCVR  333 (573)
Q Consensus       260 dg~~l~sgs~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~l~s------~~~dg~v~iwd~~~~~~~~  333 (573)
                      +.+.|+.+...|.+.++-+..++....    .+.+|........++    .++.-      |-.-..+.+-++.......
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkL----tkePI~~~~~Pk~~l----dfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~   96 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKL----NREPINSVLDPHYGV----GRVILVRDVSKGAEQHALFKVNTSRPGEEQ   96 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEEC----CSSCCSEECEECTTB----SEEEEEEECSTTSCCEEEEEEETTSTTCEE
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEE----ecccccCcCCCccCc----ceEEEEeehhcCcceeeEEEEccCCCCeee
Confidence            344778888899988887776654321    112222111100000    01110      1112233444443211122


Q ss_pred             EecCC-CccEEEEEECCCcEEEEEeCCCeEEEEeCCCCeeeEecc-CCcceeeEEEeccCceeEEEEcCCCceeeCCCCc
Q psy2671         334 VLTSH-TRSVTCIRWGGSGLIYSASQDRTIKVWRASDGVMCRTLE-GHAHWVNTLALSTDYLMRVEATSTGGFKYDPANP  411 (573)
Q Consensus       334 ~~~~h-~~~v~~~~~~~~~~l~s~s~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~~~~~~~~~~~~~~~~~  411 (573)
                      .+..- .-.|.+++..+.+..++|+......+|-++.|.+.+-.. ....+|+.+  +.+........            
T Consensus        97 ~i~spk~vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI--~~d~I~G~g~~------------  162 (313)
T d2hu7a1          97 RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDI--RGDLIAGLGFF------------  162 (313)
T ss_dssp             ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEE--ETTEEEEEEEE------------
T ss_pred             EecCCceEEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCCcceEEec--cCCeEEEEeee------------
Confidence            22222 256788888888899999988888888888776543211 111222221  22222211111            


Q ss_pred             hhhhhhhhhheeeeCCCCcEEEEEeC-CCeEEEEcCCCCccceeeeccccccEEEEEECCCCCEEEEee----CCCcEEE
Q psy2671         412 EESSKHALAKYQAQCPEGEKLVSGSD-DFTLFLWNPEKEKKSLARMTGHQQLINCVEFSPDGRIIASAS----FDKSIKL  486 (573)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~l~sg~~-dg~i~lwd~~~~~~~~~~~~~h~~~v~~v~~sp~g~~las~s----~dg~i~l  486 (573)
                                    .++..-+.++.- .|.++++++.            ++.++..-+++..+. +++-    ...-| -
T Consensus       163 --------------~g~~~sfF~adl~SG~lri~tpk------------eGS~~~ay~~~gnKV-~sdyEt~gEsywi-t  214 (313)
T d2hu7a1         163 --------------GGGRVSLFTSNLSSGGLRVFDSG------------EGSFSSASISPGMKV-TAGLETAREARLV-T  214 (313)
T ss_dssp             --------------ETTEEEEEEEETTTEEEEEECCS------------SEEEEEEEECTTSCE-EEEEEESSCEEEE-E
T ss_pred             --------------cCCcceEEEEecccCCEEEecCC------------CCcccceeEccCcee-eeccCCCCceEEE-E
Confidence                          112222444544 7788887754            344666667777665 3332    11223 4


Q ss_pred             EeCCCCeEEEe-ecC------CcceEEEEEECCCCCEEEEEeCCCcEEEEeCCcccccccccC
Q psy2671         487 WDGRIGKFITT-LRG------HVQAVYMVAWSSDSRLLVSGSADSTLKVWNMKTKKIEQDLPG  542 (573)
Q Consensus       487 wd~~~~~~~~~-~~~------h~~~v~~v~~s~dg~~las~s~D~~v~vwd~~~~~~~~~l~~  542 (573)
                      +|.++++.-.. +.+      ..-.|+-+-+.||+++++.+-.||.=++|.  .++.+...+|
T Consensus       215 ~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~in~p~G  275 (313)
T d2hu7a1         215 VDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERVEAPQG  275 (313)
T ss_dssp             ECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEECCCSS
T ss_pred             EecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEecCCCC
Confidence            58887654322 221      123566677999999999999999999986  4555444433

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=86.02  E-value=7.4  Score=31.40  Aligned_cols=133  Identities=14%  Similarity=0.273  Sum_probs=69.5

Q ss_pred             CCcEEEEEeCCCeEEEEcCCCCcc-ceeeecccc-------ccEEEEE-ECCCCCEEEEeeC-CCcEEEEeCCCCeEEEe
Q psy2671         428 EGEKLVSGSDDFTLFLWNPEKEKK-SLARMTGHQ-------QLINCVE-FSPDGRIIASASF-DKSIKLWDGRIGKFITT  497 (573)
Q Consensus       428 ~~~~l~sg~~dg~i~lwd~~~~~~-~~~~~~~h~-------~~v~~v~-~sp~g~~las~s~-dg~i~lwd~~~~~~~~~  497 (573)
                      +.....+|+......+|-++.++. .+..+.+..       +.|..+. |.+..+-+.++.. .|.+++++...      
T Consensus       113 dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpke------  186 (313)
T d2hu7a1         113 GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE------  186 (313)
T ss_dssp             SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSS------
T ss_pred             CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCC------
Confidence            344566676666666666555432 122222211       1122222 2232233444444 56666665544      


Q ss_pred             ecCCcceEEEEEECCCCCEEEEE----eCCCcEEEEeCCcccccc-cccC------cCCCEEEEEEccCCCEEEEeeCCC
Q psy2671         498 LRGHVQAVYMVAWSSDSRLLVSG----SADSTLKVWNMKTKKIEQ-DLPG------HGDEVYAVDWAPDGEKVASGGKDK  566 (573)
Q Consensus       498 ~~~h~~~v~~v~~s~dg~~las~----s~D~~v~vwd~~~~~~~~-~l~~------h~~~v~~~~~s~d~~~l~s~~~d~  566 (573)
                           +.++....++..+. +++    +...-| -+|+++++..+ .+++      ..-.|+.+-+.||++.++.+-.||
T Consensus       187 -----GS~~~ay~~~gnKV-~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG  259 (313)
T d2hu7a1         187 -----GSFSSASISPGMKV-TAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG  259 (313)
T ss_dssp             -----EEEEEEEECTTSCE-EEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred             -----CcccceeEccCcee-eeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCC
Confidence                 44556666665554 332    112224 44777665432 1211      123577788999999988899999


Q ss_pred             cEEEccC
Q psy2671         567 VLRLWQN  573 (573)
Q Consensus       567 ~i~iw~~  573 (573)
                      .=++|.|
T Consensus       260 ~s~lF~n  266 (313)
T d2hu7a1         260 RSAVFID  266 (313)
T ss_dssp             EEEEEET
T ss_pred             chheeec
Confidence            8777643

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=82.19  E-value=3.9  Score=38.04  Aligned_cols=101  Identities=12%  Similarity=0.153  Sum_probs=59.9

Q ss_pred             cEEEEEECCCCCEEEEeeCCCcEEEEeCCCCeEE--Eeec------CCcceEEEEEECCC---CCEEEEE-e------CC
Q psy2671         462 LINCVEFSPDGRIIASASFDKSIKLWDGRIGKFI--TTLR------GHVQAVYMVAWSSD---SRLLVSG-S------AD  523 (573)
Q Consensus       462 ~v~~v~~sp~g~~las~s~dg~i~lwd~~~~~~~--~~~~------~h~~~v~~v~~s~d---g~~las~-s------~D  523 (573)
                      .-.+|+|.|||+++++--..|.|++++..+++..  ..+.      .-......|+|+|+   ..+|... +      .+
T Consensus        28 ~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pdf~~n~~iYvsyt~~~~~~~~  107 (450)
T d1crua_          28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (450)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCCCccCCEEEEEEecCCCCCcc
Confidence            3579999999999887655799999987776532  2221      11356789999985   3344332 1      01


Q ss_pred             ----Cc--EEEEeCCccc--------cccc---ccCcCCCEEEEEEccCCCEEEEeeC
Q psy2671         524 ----ST--LKVWNMKTKK--------IEQD---LPGHGDEVYAVDWAPDGEKVASGGK  564 (573)
Q Consensus       524 ----~~--v~vwd~~~~~--------~~~~---l~~h~~~v~~~~~s~d~~~l~s~~~  564 (573)
                          +.  +..+......        .+..   -..|  ....+.|.|||...++.|.
T Consensus       108 ~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~gg~l~fgpDG~LYvs~Gd  163 (450)
T d1crua_         108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIGD  163 (450)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEECC
T ss_pred             cccccceEEEeeecccccccccceEEEeecccccccc--cccceeEcCCCCEEEEecC
Confidence                11  3333332211        0111   1224  3468999999988777664

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=81.74  E-value=2.7  Score=37.43  Aligned_cols=134  Identities=10%  Similarity=0.122  Sum_probs=70.8

Q ss_pred             CCeEEEEcCCCCccceeee--ccc-----cccEEEEEE--CCCCC-EEEEe---eCCCcEEEEeCCCC--e--EEEeecC
Q psy2671         438 DFTLFLWNPEKEKKSLARM--TGH-----QQLINCVEF--SPDGR-IIASA---SFDKSIKLWDGRIG--K--FITTLRG  500 (573)
Q Consensus       438 dg~i~lwd~~~~~~~~~~~--~~h-----~~~v~~v~~--sp~g~-~las~---s~dg~i~lwd~~~~--~--~~~~~~~  500 (573)
                      .|.+.++|+.+.......+  .+.     .-.-..+.+  .++|+ +|++.   ....+|.+|+....  +  .+.++..
T Consensus        67 ~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~  146 (340)
T d1v04a_          67 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH  146 (340)
T ss_dssp             CCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred             CCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC
Confidence            4788888876543322221  110     011233333  45665 33333   24567888875432  2  1223322


Q ss_pred             -CcceEEEEEECCCCCEEEEEeC---C------------CcEEEEeCCcccccccccCcCCCEEEEEEccCCCEEEEe-e
Q psy2671         501 -HVQAVYMVAWSSDSRLLVSGSA---D------------STLKVWNMKTKKIEQDLPGHGDEVYAVDWAPDGEKVASG-G  563 (573)
Q Consensus       501 -h~~~v~~v~~s~dg~~las~s~---D------------~~v~vwd~~~~~~~~~l~~h~~~v~~~~~s~d~~~l~s~-~  563 (573)
                       .....+++++..+|.+++|-..   +            ++..+|..+.++...... .-..-+.++++||+++|..+ .
T Consensus       147 ~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~-~l~~pNGI~~s~d~~~lyVa~t  225 (340)
T d1v04a_         147 KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-GFDFANGINISPDGKYVYIAEL  225 (340)
T ss_dssp             TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEE-EESSEEEEEECTTSSEEEEEEG
T ss_pred             ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcC-CCCccceeEECCCCCEEEEEeC
Confidence             2245788888899999888421   1            233444444433322222 22457889999999887654 4


Q ss_pred             CCCcEEEcc
Q psy2671         564 KDKVLRLWQ  572 (573)
Q Consensus       564 ~d~~i~iw~  572 (573)
                      ..+.|+.|+
T Consensus       226 ~~~~i~~y~  234 (340)
T d1v04a_         226 LAHKIHVYE  234 (340)
T ss_dssp             GGTEEEEEE
T ss_pred             CCCeEEEEE
Confidence            556676653