Psyllid ID: psy2876

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------
Protein Sequence
MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKDEPNIRTVI
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccHHHHcccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHcccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccEccccHHHHHHHHccccccccccccccccEccccHHHHHHcccccccccccccccEccccHHHHHHEEEccccccccccHHcHHHHHHHHHHHHHHcccccccccHcccHHcccccHHHHHcccccccccccccccccEccccHHHHHHHHccccccccccccccccEccccHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mektlykclychkvfkkstsfdkhmehhnrnvlhkchlctkaypseknldrhllthnvrrsfrckscgrrfeseELLIVHQVIherkfhkctqceesfkNKKHLKQHLLAHEKvkvfhcpkcpklfrheshlqnhvivhdesevhkCLYCFKVFVHkahldkhlilhetsemhncdfchltfttdndlirhmrsheeyhtkhtcdicgekFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYhhsqnniesesnqssgfmyndetssyshikqeddscdtymddttensntylkqetpdnedidttpvpessdilainyedkvkdepnirtvi
Flexible Loop (DISEMBL)
mektlykclycHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNtylkqetpdnedidttpvpessdilainyedkvkdepnirtvi
Low Complexity Region (SEG)
MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHsqnniesesnqssGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKDEPNIRTVI
Disordered region (IsUnstruct)
***TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYH******************************************************************************************
Disordered Region (DISOPRED)
MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKDEPNIRT*I
Disordered Region (DISEMBL)
MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKD********
Disordered Region (DISPRO)
***TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSS*SHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKDEPN*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYNDETSSYSHIKQEDDSCDTYMDDTTENSNTYLKQETPDNEDIDTTPVPESSDILAINYEDKVKDEPNIRTVI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	367	2.2.26 [Sep-21-2011]
O75437	659	Zinc finger protein 254 O	yes	N/A	0.776	0.432	0.311	3e-31
Q9H8G1	570	Zinc finger protein 430 O	no	N/A	0.711	0.457	0.309	4e-30
Q6ZNA1	936	Zinc finger protein 836 O	no	N/A	0.662	0.259	0.303	5e-30
Q8BPP0	452	Zinc finger protein 436 O	yes	N/A	0.670	0.544	0.314	9e-30
Q9C0F3	470	Zinc finger protein 436 O	no	N/A	0.670	0.523	0.311	4e-29
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.754	0.236	0.321	5e-29
Q03923	595	Zinc finger protein 85 OS	no	N/A	0.664	0.410	0.302	5e-29
A8MXY4	1036	Zinc finger protein 99 OS	no	N/A	0.711	0.251	0.324	1e-28
P10751	647	Zinc finger protein 11 OS	no	N/A	0.662	0.375	0.305	1e-28
O75346	499	Zinc finger protein 253 O	no	N/A	0.711	0.523	0.307	1e-28

>sp|O75437|ZN254_HUMAN Zinc finger protein 254 OS=Homo sapiens GN=ZNF254 PE=2 SV=3

 Score =  136 bits (342), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 136/299 (45%), Gaps = 14/299 (4%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           YKC  C K F  S++  +H + H R   +KC  C KA+     L RH   H   + ++C+
Sbjct: 294 YKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCE 353

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L  H++IH   K +KC +C ++FK    L  H + H   K++ C +C K
Sbjct: 354 ECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGK 413

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F   S+L  H I+H   + +KC  C K F+  + L KH  +H   + + C+ C   F  
Sbjct: 414 GFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIW 473

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
            + L RH R H      + C+ CG+ F     L  H KIIH     + C  CG   N + 
Sbjct: 474 SSTLTRHKRMHTG-EKPYKCEECGKSFSQSSTLTTH-KIIHTGEKPYKCEECGKAFNWSS 531

Query: 242 DYASHLLIIHNIESSQQVEK--NLNNMYNLLTTHIEYHHSQNNIESES-----NQSSGF 293
               H  IIH  E   + EK        ++LT H   H  +   + E      N+SS F
Sbjct: 532 TLTKH-KIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTF 589

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9H8G1|ZN430_HUMAN Zinc finger protein 430 OS=Homo sapiens GN=ZNF430 PE=2 SV=3

 Score =  132 bits (332), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 123/271 (45%), Gaps = 10/271 (3%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y+C  C KVF   ++  +H   H     +KC  C KA+     L  H + H   + +RC+
Sbjct: 233 YQCEECGKVFNWFSTLTRHRRIHTGEKPYKCEQCGKAFKQSSTLTTHKIIHTGEKPYRCE 292

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L  H+ IH   K ++C +C  +F    HL  H + H   K + C +C K
Sbjct: 293 ECGKTFNRSSHLTTHKRIHTGEKPYRCEECGRAFNRSSHLTTHKIIHTGEKPYKCEECGK 352

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F   S L  H I+H   + +KC  C K F   ++L KH I+H   + + C+ C   F  
Sbjct: 353 AFNQSSTLTTHKIIHAGEKPYKCEECGKAFYRFSYLTKHKIIHTGEKFYKCEECGKGFNW 412

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
            + L +H R H      + C+ CG+ F     L AH KIIH     + C  CG   N + 
Sbjct: 413 SSTLTKHKRIHTG-EKPYKCEQCGKAFNESSNLTAH-KIIHTGEKPYKCEECGKAFNRSP 470

Query: 242 DYASHLLIIHNIESSQQVE---KNLNNMYNL 269
              +H  +IH+ E   + E   K  N   NL
Sbjct: 471 KLTAH-KVIHSGEKPYKCEECGKAFNQFSNL 500

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNA1|ZN836_HUMAN Zinc finger protein 836 OS=Homo sapiens GN=ZNF836 PE=2 SV=2

 Score =  132 bits (332), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 4/247 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y+C  C KVF+++++   H   H     +KC++C K++    NL  H   H+  + ++C 
Sbjct: 358 YQCDICGKVFRQNSNLVNHQRIHTGEKPYKCNICGKSFSQSSNLATHQTVHSGNKPYKCD 417

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F+    L  HQ+IH   K + C  C++ F  +  L +H  +H   K + C +C K
Sbjct: 418 ECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGK 477

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
           +F   SHL  H  +H   + +KC  C K F   + L +H I+H   + + C  C   F+ 
Sbjct: 478 VFSQTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSE 537

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
           ++ L+RH+R H      + C++CG+ F     L  H +I      F C  CG    N   
Sbjct: 538 NSCLVRHLRIHTG-EQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSC 596

Query: 243 YASHLLI 249
            A HL I
Sbjct: 597 LARHLRI 603

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BPP0|ZN436_MOUSE Zinc finger protein 436 OS=Mus musculus GN=Znf436 PE=2 SV=1

 Score =  131 bits (329), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 8   CLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC 67
           C  C K F + +  ++H + H  +  +KC+ C K +    +L +H  TH   R + C  C
Sbjct: 122 CSQCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNEC 181

Query: 68  GRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLF 126
           G+ F     LI HQ IH   K HKCT+C +SF    HL QH   H   K + C +C K F
Sbjct: 182 GKSFGRSSHLIQHQTIHTGEKPHKCTECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSF 241

Query: 127 RHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDN 186
              SHL  H   H   + ++C  C + F  ++ L KH  +H     + CD C   F+ ++
Sbjct: 242 SRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNS 301

Query: 187 DLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIK--IIHNLFTCIHCGDTLNNAKDYA 244
           DL+RH R+H      H C+ CGE F     L  H +       + C  CG + +     +
Sbjct: 302 DLVRHRRAHTGEKPYH-CNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFSR----S 356

Query: 245 SHLLIIHNIESSQQ 258
           SHL+    I + ++
Sbjct: 357 SHLITHQKIHTGEK 370

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9C0F3|ZN436_HUMAN Zinc finger protein 436 OS=Homo sapiens GN=ZNF436 PE=2 SV=2

 Score =  129 bits (324), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 8   CLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC 67
           C +C K F + +  ++H + H  +  +KC+ C K +    +L +H  TH   R + C  C
Sbjct: 140 CSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNEC 199

Query: 68  GRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLF 126
           G+ F     LI HQ IH   K HKC +C +SF    HL QH   H   K + C +C K F
Sbjct: 200 GKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSF 259

Query: 127 RHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDN 186
              SHL  H   H   + ++C  C + F  ++ L KH  +H     + CD C   F+ ++
Sbjct: 260 SRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNS 319

Query: 187 DLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIK--IIHNLFTCIHCGDTLNNAKDYA 244
           DL+RH R+H      H C+ CGE F     L  H +       + C  CG + +     +
Sbjct: 320 DLVRHRRAHTGEKPYH-CNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSR----S 374

Query: 245 SHLLIIHNIESSQQ 258
           SHL+    I + ++
Sbjct: 375 SHLITHQKIHTGEK 388

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  129 bits (323), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 133/286 (46%), Gaps = 9/286 (3%)

Query: 7    KCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS 66
            KC  C K FK  ++  KH   H R  L+KC  C KA+ S   L +H + H   + ++C+ 
Sbjct: 741  KCEECGKSFKHFSALRKHKVIHTREKLYKCEECVKAFNSFSALMKHKVIHTGEKPYKCEE 800

Query: 67   CGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKL 125
            CG+ F+    L VH+VIH   K  KC +C ++FK+   L++H + H   K + C +C K 
Sbjct: 801  CGKAFKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKIIHTGEKPYKCEECGKA 860

Query: 126  FRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTD 185
            F   S L  H  +H   + +KC  C K F   +HL  H I+H   + + C+ C   F   
Sbjct: 861  FHQSSKLAKHKKIHTGEKPYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFNQS 920

Query: 186  NDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIH---NLFTCIHCGDTLNNAKD 242
             +L  H R H      + C+ CG  F     L AH KIIH     + C  CG   + +  
Sbjct: 921  ANLTTHKRIHTG-EKPYKCEECGRAFSQSSTLTAH-KIIHAGEKPYKCEECGKAFSQSST 978

Query: 243  YASHLLIIHNIESSQQVEKNLNNMYNL--LTTHIEYHHSQNNIESE 286
              +H  IIH  E   + E+       L  LTTH   H  +   + E
Sbjct: 979  LTTH-KIIHTGEKFYKCEECGKAFSQLSHLTTHKRIHSGEKPYKCE 1023

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q03923|ZNF85_HUMAN Zinc finger protein 85 OS=Homo sapiens GN=ZNF85 PE=2 SV=3

 Score =  129 bits (323), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 122/274 (44%), Gaps = 30/274 (10%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           YKC  C K F +S++   H + H     +KC  C KA+    NL  H + H   + ++CK
Sbjct: 286 YKCKECGKAFNRSSTLTTHRKIHTGEKPYKCEECGKAFKQSSNLTTHKIIHTGEKPYKCK 345

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L  H+VIH   K +KC +C ++F +  HL  H + H   K + C +C K
Sbjct: 346 KCGKAFNQSAHLTTHEVIHTGEKPYKCEKCGKAFNHFSHLTTHKIIHTGEKPYKCKECGK 405

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F+H S L  H I+H   + +KC  C K F   + L +H  +H   + + C+ C   F  
Sbjct: 406 AFKHSSTLTKHKIIHTGEKPYKCKECEKAFNQSSKLTEHKKIHTGEKPYECEKCGKAFNQ 465

Query: 185 DNDLIRHMRSHEE------------------------YHTK---HTCDICGEKFINDLKL 217
            ++L RH +SH E                         HT    + C+ CG+ F    KL
Sbjct: 466 SSNLTRHKKSHTEEKPYKCEECGKGFKWPSTLTIHKIIHTGEKPYKCEECGKAFNQSSKL 525

Query: 218 KAHIKI--IHNLFTCIHCGDTLNNAKDYASHLLI 249
             H KI      +TC  CG   N + +   H  I
Sbjct: 526 TKHKKIHTGEKPYTCEECGKAFNQSSNLTKHKRI 559

May be a transcriptional repressor.

Homo sapiens (taxid: 9606)

>sp|A8MXY4|ZNF99_HUMAN Zinc finger protein 99 OS=Homo sapiens GN=ZNF99 PE=2 SV=2

 Score =  127 bits (320), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 130/277 (46%), Gaps = 16/277 (5%)

Query: 3   KTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSF 62
           K  YKC  C K F  S++  KH   H     +KC  C KA+    +L RH   H   + +
Sbjct: 443 KKPYKCEECGKAFNNSSTLMKHKIIHTGKKPYKCEECGKAFKQSSHLTRHKAIHTGEKPY 502

Query: 63  RCKSCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPK 121
           +C+ CG+ F     L  HQ+IH  +K +KC +C ++F     L++H + H   K + C +
Sbjct: 503 KCEECGKAFNHFSALRKHQIIHTGKKPYKCEECGKAFSQSSTLRKHEIIHTGEKPYKCEE 562

Query: 122 CPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLT 181
           C K F+  SHL  H ++H E + +KC  C K F H + L KH I+H   + + C+ C   
Sbjct: 563 CGKAFKWSSHLTRHKVIHTEEKPYKCEECGKAFNHFSALRKHKIIHTGKKPYKCEECGKA 622

Query: 182 FTTDNDLIRHMRSHEEYHTK---HTCDICGEKFINDLKLKAHIKIIHNL---FTCIHCGD 235
           F+  + L    R HE  HT    + C+ CG+ F    KL  H K+IH       C  CG 
Sbjct: 623 FSQSSTL----RKHEIIHTGEKPYKCEECGKAFKWSSKLTVH-KVIHTAEKPCKCEECGK 677

Query: 236 TLNNAKDYASHLLIIHNIESSQQVE---KNLNNMYNL 269
              +      H  IIH  +   + E   K  NN   L
Sbjct: 678 AFKHFSALRKH-KIIHTGKKPYKCEECGKAFNNSSTL 713

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10751|ZFP11_MOUSE Zinc finger protein 11 OS=Mus musculus GN=Zfp11 PE=2 SV=2

 Score =  127 bits (320), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 123/275 (44%), Gaps = 32/275 (11%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           YKC  C K FK+S +  +H   H R   HKC  C +A+ +   L +H +TH   + F+CK
Sbjct: 85  YKCKECGKAFKRSRNLAQHQVTHKREKPHKCEECGRAFSALSVLTQHRITHTGEKPFKCK 144

Query: 66  SCGRRFESEELLIVHQVIH-----------------------------ERKFHKCTQCEE 96
            CGR F+    L  H+VIH                               K HKC +C  
Sbjct: 145 ECGRAFKYNSTLTQHEVIHTEAKPYRCQECGKAFKRSHTLSQHQVIHKGEKPHKCDECGR 204

Query: 97  SFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVH 156
           +F     L QH + H   K + C +C K FR++S L  H IVH  ++ +KC  C K F +
Sbjct: 205 AFSKHSSLTQHQVIHTGEKPYQCRECGKAFRYQSTLTRHHIVHTGAKPYKCPECDKAFNN 264

Query: 157 KAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLK 216
            + L +H I+H   + + C  C   F   + LI+HM+ H E    + C  CG+ F    +
Sbjct: 265 SSTLSRHQIIHTGEKPYKCQECGRAFYCSSFLIQHMKIHFE-EMPYRCRECGKPFRLSSQ 323

Query: 217 LKAHIKI--IHNLFTCIHCGDTLNNAKDYASHLLI 249
           L  H +I      + C  CG T     +   H ++
Sbjct: 324 LIRHQRIHTGEEPYICRECGKTFKYQSNLTRHQIL 358

Mus musculus (taxid: 10090)

>sp|O75346|ZN253_HUMAN Zinc finger protein 253 OS=Homo sapiens GN=ZNF253 PE=2 SV=2

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 6/267 (2%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y+C  C K FK+S++   H + H     +KC  C KA+    +L  H + H   + ++C+
Sbjct: 228 YRCEECGKAFKQSSNLTTHKKIHTGEKPYKCEECGKAFNRSTDLTTHKIVHTGEKPYKCE 287

Query: 66  SCGRRFESEELLIVHQVIHER-KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F+    +  H+ IH R K + C +C +SFK+  +L  H   H   K + C +C K
Sbjct: 288 ECGKAFKHPSHVTTHKKIHTRGKPYNCEECGKSFKHCSNLTIHKRIHTGEKPYKCEECGK 347

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F   SHL  H I+H   + ++C  C K F H   L  H  +H   + + CD C  TFT 
Sbjct: 348 AFHLSSHLTTHKILHTGEKPYRCRECGKAFNHSTTLFSHEKIHTGEKPYKCDECGKTFTW 407

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
            + L +H R+H      + C+ CG+ F     L  H +I      + C  CG   N + D
Sbjct: 408 PSILSKHKRTHTG-EKPYKCEECGKSFTASSTLTTHKRIHTGEKPYKCEECGKAFNWSSD 466

Query: 243 YASHLLIIHNIESSQQVEKNLNNMYNL 269
              H  I  +IE    + KN+ ++ N+
Sbjct: 467 LNKHKKI--HIERKPYIVKNVTDLLNV 491

May function as a transcription factor. Seem to have a transcriptional repression activity.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
326667100	904	PREDICTED: zinc finger protein 721-like,	0.662	0.268	0.331	5e-33
326667289	1202	PREDICTED: zinc finger protein 729-like	0.673	0.205	0.318	2e-31
334327353	1783	PREDICTED: hypothetical protein LOC10001	0.653	0.134	0.307	5e-31
392332658	713	PREDICTED: zinc finger protein 11-like [	0.662	0.340	0.331	8e-31
348543634	792	PREDICTED: zinc finger protein 729-like	0.675	0.313	0.330	1e-30
327279775	1249	PREDICTED: zinc finger protein 628-like	0.588	0.172	0.342	2e-30
326666796	1351	PREDICTED: zinc finger protein 91-like [	0.662	0.179	0.315	3e-30
326680774	1307	PREDICTED: zinc finger protein 729-like	0.656	0.184	0.318	3e-30
156376670	540	predicted protein [Nematostella vectensi	0.656	0.446	0.326	3e-30
326666933	450	PREDICTED: zinc finger protein 235-like	0.670	0.546	0.313	4e-30

>gi|326667100|ref|XP_003198485.1| PREDICTED: zinc finger protein 721-like, partial [Danio rerio]

 Score =  147 bits (372), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 119/247 (48%), Gaps = 4/247 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           +KC  C K F + +SF +HM  H       C  C K++    NL+ H+  H   + F C 
Sbjct: 458 FKCTPCRKSFSQLSSFKQHMRIHTGEKPFTCPQCGKSFSQSSNLNLHMRIHTGEKPFTCP 517

Query: 66  SCGRRFESEELLIVHQVIHER-KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L +H  IH   K   CTQC +SF +  HL QH++ H   K F C +C K
Sbjct: 518 QCGKSFSQSSNLNLHMRIHTGDKPFTCTQCGKSFSHLSHLNQHMMIHTGEKPFTCTQCGK 577

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F H SH   H+++H   +   C  C K F H +HL++H+++H   +   C  C  +F+ 
Sbjct: 578 SFSHSSHFNQHMMIHTGEKPFTCTQCGKSFSHSSHLNQHMMIHTGEKPFTCTQCGKSFSQ 637

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
            + L +HMR H       TC  CG+ F     L  H+KI      FTC  CG + + +  
Sbjct: 638 SSSLNQHMRIHTG-EKPFTCPQCGKSFSKSSSLYRHMKIHTGEKPFTCPQCGKSFSLSSS 696

Query: 243 YASHLLI 249
              H+ I
Sbjct: 697 LYRHMKI 703

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667289|ref|XP_003198555.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 121/251 (48%), Gaps = 4/251 (1%)

Query: 2   EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS 61
           E+  + C  C K F++S+S  +HM  H       C  C K++     L+RH+  H   + 
Sbjct: 342 EEKPFSCTQCGKSFRRSSSLRQHMRIHTGEKPFTCTQCGKSFIQSSQLNRHMRIHTGEKP 401

Query: 62  FRCKSCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCP 120
           F C  CG+ F       +H  IH   K   CTQC +SF+    LK+H+  H   K F C 
Sbjct: 402 FTCTQCGKSFSRSSYFNLHMRIHTGEKLFSCTQCGKSFRCSSSLKEHMRIHSGEKPFTCT 461

Query: 121 KCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHL 180
           +C K F   SHL  H+++H   +   C  C+K F   +HL++H+++H   +   C  C  
Sbjct: 462 QCGKSFSRSSHLNEHMMIHTGEKPFTCTQCWKSFSRSSHLNQHMMIHTGEKPFTCTLCGK 521

Query: 181 TFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLN 238
           +F  + DL  HM  H   +T  TC  CG+ F  +  LK H++I      FTC  CG + +
Sbjct: 522 SFGRNFDLKTHMTIHTGENT-FTCTQCGKSFGRNFDLKIHMRIHTGEKPFTCTLCGKSFS 580

Query: 239 NAKDYASHLLI 249
            +     H+ I
Sbjct: 581 RSSHLNEHMKI 591

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|334327353|ref|XP_001371662.2| PREDICTED: hypothetical protein LOC100018428 [Monodelphis domestica]

 Score =  141 bits (355), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 75/244 (30%), Positives = 108/244 (44%), Gaps = 4/244 (1%)

Query: 6    YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
            YKC  C K F+    F KH   H     ++C  C K + S   L  H   H   + + CK
Sbjct: 1448 YKCNQCGKTFRYRNVFAKHQRIHTGEKPYECRQCGKTFTSNSQLAVHHRIHTGEKPYDCK 1507

Query: 66   SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
             CG+ F   + L VH  IH   K H+C QCE++F  K  L +H   H   K + C +C K
Sbjct: 1508 QCGKAFIRRDQLAVHLRIHTGEKPHECKQCEKTFNRKSSLAEHQKTHTGEKPYECKQCGK 1567

Query: 125  LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
             F H S L  H  +H   + + C  C K F  ++H   H  +H   + ++C  C  TF+ 
Sbjct: 1568 TFSHSSSLAAHQRIHTGEKPYDCKQCGKTFSQRSHFAAHQRIHTGEKPYDCKQCGKTFSQ 1627

Query: 185  DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKII--HNLFTCIHCGDTLNNAKD 242
             + L  H R H      + C  CG+ F N+  L  H +       + C +C  T + +  
Sbjct: 1628 SSTLSVHQRIHTG-EKPYKCKQCGKTFTNNSNLAVHQRTHTGEKPYECKYCEMTFSESSS 1686

Query: 243  YASH 246
             A H
Sbjct: 1687 LAVH 1690

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|392332658|ref|XP_002724881.2| PREDICTED: zinc finger protein 11-like [Rattus norvegicus]

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 4/247 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           YKC  C K FK+S +  +H   H R   HKC  C +A+ +   L +H +TH   + ++CK
Sbjct: 179 YKCKECGKAFKRSRNLAQHQVTHKREKPHKCEECGRAFTTLSVLTQHRVTHTGEKPYQCK 238

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CGR F+    L  H+VIH E K ++C +C ++FK    L QH + H   K + C +C K
Sbjct: 239 ECGRAFKYNSTLTQHEVIHTEAKPYRCQECGKAFKRSHTLSQHQVIHTGEKPYQCRECGK 298

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F+++S L  H IVH  ++ +KC  C K F + + L +H I+H   + + C  C   F  
Sbjct: 299 AFKYQSTLTRHQIVHTGTKPYKCPECGKAFNNSSTLSRHQIIHTGEKPYKCQECGRAFYC 358

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
            + LI+HM+ H E    + C  CG+ F    +L  H +I      + C  CG T     +
Sbjct: 359 SSFLIQHMKIHFE-EMPYRCKECGKPFRLSSQLIRHQRIHTGEEPYICKECGKTFKYQSN 417

Query: 243 YASHLLI 249
              H ++
Sbjct: 418 LTRHQIL 424

Source: Rattus norvegicus

Species: Rattus norvegicus

Genus: Rattus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348543634|ref|XP_003459288.1| PREDICTED: zinc finger protein 729-like [Oreochromis niloticus]

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y C +C K F ++ +   H   H+    + C LC K +   +NL RH L H+  + + C 
Sbjct: 363 YSCEFCGKSFVQAGNLKSHQLIHSAVKAYSCDLCGKWFTRAENLKRHHLIHSGFKPYSCD 422

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F   E L  HQ+IH E K + C  C +SF   + LK+H L H +VK + C  C K
Sbjct: 423 LCGKCFTQAEGLKKHQLIHSEVKPYSCDLCGKSFARAEGLKKHQLIHSEVKPYSCDLCGK 482

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F     L+ H ++H E + + C  C K FV    L  H ++H   + ++CD C  +FT 
Sbjct: 483 SFTQAGSLKTHQLIHSEVKPYSCELCGKSFVRAEGLKTHQLIHSGVKPYSCDECGKSFTR 542

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLF---TCIHCGDTLNNAK 241
             DL +H   H  +   ++CD+CG+ F     LK H ++IH+ F   +C  CG +   A+
Sbjct: 543 AGDLKKHQLIHSGFKP-YSCDLCGKSFAWAGDLKKH-QLIHSGFKPYSCDLCGKSFTRAR 600

Query: 242 DYASHLLIIHNIES 255
               H LI   ++S
Sbjct: 601 HLKIHQLIHSGVKS 614

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327279775|ref|XP_003224631.1| PREDICTED: zinc finger protein 628-like [Anolis carolinensis]

 Score =  139 bits (350), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 75/219 (34%), Positives = 105/219 (47%), Gaps = 3/219 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y+CL C KVFK S+    H   H     +KC  C KA+     L  H   H   R ++C 
Sbjct: 71  YECLECGKVFKWSSRLIHHQRTHTGERPYKCSECPKAFKGSSALLYHQRGHTGERPYKCG 130

Query: 66  SCGRRFESEELLIVHQVIHE--RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
            CG+ F+   LL +HQ +H   R F KC QC  +FK   H + HL  H   + + CP C 
Sbjct: 131 ECGKAFKRSSLLQIHQSVHTGLRAF-KCAQCGLAFKWSSHYQYHLRQHTGERPYPCPACD 189

Query: 124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFT 183
           K F++ S L+ H   H     + C  C K F    +L +H  +H     + C  C   FT
Sbjct: 190 KAFKNSSSLRRHRHTHTGERPYVCPVCSKAFAQSTNLRQHQRVHTGERPYRCQDCGKAFT 249

Query: 184 TDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIK 222
             ++L  H RS       HTC ICG+ F +D+ L+ H++
Sbjct: 250 HSSNLALHCRSAHAARPAHTCVICGKAFASDIYLQHHLE 288

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666796|ref|XP_003198377.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 4/247 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y+C  C K F   +    HM  H       C  C K++    +L++H+  H   + F C 
Sbjct: 717 YRCTECGKSFPYKSDLKIHMRIHTGEKPFTCTQCGKSFSKSSSLNQHMRIHTGEKPFTCT 776

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CGR F     L  H +IH  +K   CTQC +SF+    L  H++ H   K F C +C K
Sbjct: 777 QCGRSFSQSSYLNKHMMIHTGKKPFTCTQCGKSFRQSSSLNYHMMIHAGEKPFTCSQCGK 836

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F   SHL  H+++H   +   C  C K F H   L +H+++H   +   C  C  +F+ 
Sbjct: 837 SFSCSSHLNKHMMIHTGEKPFSCTQCGKSFRHSLFLKQHMMIHTGEKPFTCTQCGKSFSQ 896

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
            + L  HMR H       TC  CG+ FI   +L  HI I      FTC  CG + + + +
Sbjct: 897 SSSLNHHMRIHTG-EKPFTCTECGKSFIQSSQLNRHIMIHTGEKPFTCTQCGKSFSQSSN 955

Query: 243 YASHLLI 249
           +  H++I
Sbjct: 956 FNQHMMI 962

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680774|ref|XP_002661688.2| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 10/251 (3%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           + C+ C K F  S++  +HM  H       C+ C K++  + NL+ H+  H  ++ F+C 
Sbjct: 38  FTCIQCRKSFNFSSNLHRHMRIHTGEKPFTCNQCWKSFSQKSNLNLHMRIHTRKKPFKCT 97

Query: 66  SCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
            CG+ F     L  H  IH  E+ F  CTQCE+SF    +L++H+ +H   K F C +C 
Sbjct: 98  QCGKSFNCSSDLYKHMRIHTGEKPF-TCTQCEKSFNFSSNLRRHMRSHTGEKPFTCTQCG 156

Query: 124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFT 183
           K + H SHL  H+++H   +  KC  C K F   + L++H+ +H   +   C  C  +F 
Sbjct: 157 KSYNHISHLNQHMMIHTGEKPFKCTQCGKSFSQSSSLNQHMRIHTGEKPFQCTQCRKSFK 216

Query: 184 TDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHI------KIIHNLFTCIHCGDTL 237
             ++L RHMR H       TC  CG+ F     L  HI      K   N FTC  CG + 
Sbjct: 217 ISSNLYRHMRIHTG-EKPFTCPQCGKSFSQSSHLNKHIMSHTGEKPDENCFTCTQCGKSF 275

Query: 238 NNAKDYASHLL 248
           + +     H++
Sbjct: 276 SQSSSLNLHMM 286

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156376670|ref|XP_001630482.1| predicted protein [Nematostella vectensis] gi|156217504|gb|EDO38419.1| predicted protein [Nematostella vectensis]

 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 108/245 (44%), Gaps = 4/245 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           YKC  C K F  ++S  +HM  H+    HKC  C KA+     L RH+ TH+  +  +C 
Sbjct: 289 YKCTQCGKAFAHASSLTEHMRTHSGEKPHKCTQCGKAFARASVLTRHMRTHSGEKPHKCT 348

Query: 66  SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L  H   H   K HKCTQC + F     L  H+  H   K   C +C K
Sbjct: 349 QCGKVFAHAGNLTTHMRTHSGEKPHKCTQCGKVFAQAGILTTHMRTHSGEKPHKCTQCGK 408

Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
            F   S+L  H+  H   + HKC  C KVF H  +L  H+  H   + H C  C   F  
Sbjct: 409 AFAQASNLTTHMRTHSGEKPHKCTQCGKVFAHAGNLTTHMRTHSGEKPHKCTQCGKVFAQ 468

Query: 185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTLNNAKD 242
             +L  HMR+H      H C  CG+ F +   L  H++I      + C  CG    +   
Sbjct: 469 AGNLTTHMRTHSG-EKPHKCTQCGKAFAHASNLTKHMRIHSGEKPYKCTQCGKVFAHTSH 527

Query: 243 YASHL 247
              H+
Sbjct: 528 LTKHM 532

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|326666933|ref|XP_003198424.1| PREDICTED: zinc finger protein 235-like [Danio rerio]

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 2   EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS 61
           +K  + C  C + F +   F  HM  H       C  C K++    +L++H+  H   + 
Sbjct: 51  DKNRFTCTQCGRNFGRKGDFKIHMRIHTGEKPFTCTQCGKSFSKSSSLNQHMRIHTGEKP 110

Query: 62  FRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHC 119
           F C  CGR F     L  H +IH  E+ F  CTQC +SF+    L  H++ H   K F C
Sbjct: 111 FTCTQCGRSFSQSSYLNKHMMIHTGEKPF-TCTQCGKSFRQSSSLNYHMMIHTGEKPFTC 169

Query: 120 PKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCH 179
            +C K F   SHL  H+++H   +   C  C K F H   L +H+++H   +   C  C 
Sbjct: 170 SQCVKSFSCSSHLNKHMMIHTGEKPFSCTQCGKSFRHSLFLKQHMMIHTGEKPFTCTQCG 229

Query: 180 LTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI--IHNLFTCIHCGDTL 237
            +F+  + L  HMR H       TC  CG+ FI   +L  HI I      FTC  CG + 
Sbjct: 230 KSFSQSSSLNHHMRIHTG-EKPFTCTQCGKSFIQSSQLNRHIMIHTGEKPFTCTQCGKSF 288

Query: 238 NNAKDYASHLLI 249
           + + ++  H++I
Sbjct: 289 SQSSNFNLHMMI 300

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	367
ZFIN|ZDB-GENE-110913-172	401	si:dkey-165b20.3 "si:dkey-165b	0.730	0.668	0.329	1.8e-39
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.727	0.270	0.332	1.9e-39
ZFIN|ZDB-GENE-110913-166	408	si:dkeyp-82b4.3 "si:dkeyp-82b4	0.727	0.654	0.325	2.1e-38
UNIPROTKB|F1RWD7	592	LOC100511574 "Uncharacterized	0.656	0.407	0.342	2.1e-38
UNIPROTKB|F5H2M4	574	ZNF254 "Zinc finger protein 25	0.732	0.468	0.316	4.3e-38
UNIPROTKB|Q9H8G1	570	ZNF430 "Zinc finger protein 43	0.858	0.552	0.278	5.5e-38
UNIPROTKB|O75437	659	ZNF254 "Zinc finger protein 25	0.732	0.408	0.316	1.4e-37
ZFIN|ZDB-GENE-110913-125	616	si:dkeyp-53e4.2 "si:dkeyp-53e4	0.743	0.443	0.301	3e-37
ZFIN|ZDB-GENE-071004-11	517	zgc:171220 "zgc:171220" [Danio	0.738	0.524	0.332	3e-37
UNIPROTKB|P17019	563	ZNF708 "Zinc finger protein 70	0.730	0.476	0.315	3.9e-37

ZFIN|ZDB-GENE-110913-172 si:dkey-165b20.3 "si:dkey-165b20.3" [Danio rerio (taxid:7955)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 92/279 (32%), Positives = 131/279 (46%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             + C+ C K F KS+S  +HM  H       C  C K++    +L+ H+++H  R+ F C 
Sbjct:   122 FTCIQCGKSFNKSSSLYRHMNIHTGEKPFTCTQCEKSFIQSSSLNEHMMSHTGRKPFICT 181

Query:    66 SCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
              CG+ F     LI H  IH  E+ F  C QC +SF    HL QH+  H + K F CPKC 
Sbjct:   182 LCGKSFSQSAYLIKHMRIHTGEKPF-TCPQCGKSFNQSSHLNQHMRIHTRDKPFTCPKCG 240

Query:   124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFT 183
             K F   SHL  H+ +H   +   C  C K F   ++L+KH+ +H   ++  C  C  +F+
Sbjct:   241 KSFMKLSHLNEHMRIHTGEKPFTCPQCGKSFSCSSYLNKHMKIHTGEKLFTCTQCRKSFS 300

Query:   184 TDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNL--FTCIHCGDTLNNAK 241
               + LI+HMR H       TC  CG+ F     L  H+KI   +  + C+ C  T   A 
Sbjct:   301 QSSSLIKHMRIHTG-EKPFTCPKCGKSFNQSSSLNKHMKIHTGVREYMCLECEKTFITAG 359

Query:   242 DYASHLLIIHNIESSQQVE---KNLNNMYNLLTTHIEYH 277
             D   H  I H  E + +     K   +    L TH   H
Sbjct:   360 DLKRHQRI-HTGEKTYKCSHCSKRFTHS-RTLKTHERIH 396

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 431 (156.8 bits), Expect = 1.9e-39, P = 1.9e-39
 Identities = 93/280 (33%), Positives = 136/280 (48%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             + C  C K F + +SF++HM  H    L  C  C K++    NL  H+  H   + F C 
Sbjct:   401 FMCTPCGKSFSQLSSFNQHMRIHTGEKLFSCTQCGKSFSQSSNLILHMRIHTGEKPFTCT 460

Query:    66 SCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
              CG+ F     LI+H  IH  E+ F  CTQC +SF +   L QH++ H   K F C +C 
Sbjct:   461 QCGKSFSQSSNLILHTRIHTGEKPF-TCTQCGKSFSHSSSLNQHMMIHTGEKPFTCTQCG 519

Query:   124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFT 183
             K F     L  H+ +H   +   C  C K F   ++L+KH+ +H       C  C  +FT
Sbjct:   520 KSFSQSLSLNQHMKIHTGEKPFTCTKCGKSFNQSSYLNKHMRIHTGKRSFTCTRCGKSFT 579

Query:   184 TDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNA 240
               + L +HM++H    T + C  CG+   N  KLK H++I HN   LFTC  CG + +N+
Sbjct:   580 HSSHLKKHMKNHTA-ETLYQCSECGKSLANKSKLKIHMRI-HNRVKLFTCTQCGKSFSNS 637

Query:   241 KDYASHLLIIHNIE---SSQQVEKNLNNMYNLLTTHIEYH 277
              +   H+ I H  E   +  Q  K+ +   NL   H+  H
Sbjct:   638 ANLNQHMRI-HTGEKPFTCTQCGKSFSQSSNL-NLHMRIH 675

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-166 si:dkeyp-82b4.3 "si:dkeyp-82b4.3" [Danio rerio (taxid:7955)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 91/280 (32%), Positives = 132/280 (47%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             + C  C K F  S +  KHM  H       C+ C K++  + NL+ H+  H  ++ F+C 
Sbjct:    94 FTCAQCGKSFNCSANLYKHMRIHTGEKPFTCNQCGKSFSQKSNLNLHMRIHTRKKPFKCT 153

Query:    66 SCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
              CG+ F     L  H  IH  E+ F KCTQC +SF    +L QH+  H   K F C +C 
Sbjct:   154 QCGKSFNRSSDLYKHMRIHTGEKSF-KCTQCGKSFNRSSNLHQHMRIHTVEKPFTCTQCG 212

Query:   124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFT 183
             K F   S+L  H+++H   +   C  C K F H + L++H+++H   +   C  C  +F 
Sbjct:   213 KSFNFSSNLYRHMMIHTGEKPFTCTQCGKSFNHLSSLNQHMMIHTGEKPFKCTQCGKSFN 272

Query:   184 TDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNA 240
               +DL +HMR H       TC  CG+ F     L  H+ +IH     F C  CG + N +
Sbjct:   273 RSSDLYKHMRIHTG-EKPFTCIQCGKSFNFSSNLYRHM-MIHTGEKPFKCTQCGKSFNRS 330

Query:   241 KDYASHLLIIHNIE---SSQQVEKNLNNMYNLLTTHIEYH 277
              D   H+ I H  E   +  Q  K+ N   NL   H+  H
Sbjct:   331 SDLCKHMRI-HTGEKPFTCTQCGKSFNFSSNL-NRHMRIH 368

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1RWD7 LOC100511574 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 84/245 (34%), Positives = 110/245 (44%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             Y+C  C K F + +S  +H+  H     HKC  C KA+    +L RHL +H   +  +C 
Sbjct:    56 YRCSECGKAFNRHSSLTQHLRSHTGEKPHKCTECGKAFHWPSSLTRHLSSHTGEKPHKCT 115

Query:    66 SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
              CG+ F     L  HQ  H   K HKCT+C ++F    HL QHL +H  VK + C +C K
Sbjct:   116 ECGKAFNRHSHLTEHQRSHTGEKPHKCTECGKAFHRHSHLTQHLNSHAGVKPYRCAECGK 175

Query:   125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
              F   S L  H+  H   + HKC  C K F   +HL +HL  H   + H C  C   F +
Sbjct:   176 AFNRHSSLTQHLRSHTGEKPHKCTECGKAFNQHSHLTQHLSSHTGKKPHKCTECGKAFHS 235

Query:   185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKII--HNLFTCIHCGDTLNNAKD 242
              + L RH RSH      H C  CG+ F     L  H +         C  CG   N    
Sbjct:   236 PSSLTRHQRSHTG-EKPHKCTECGKAFNRHSHLTEHQRSHTGEKPHKCTECGKAFNRHSH 294

Query:   243 YASHL 247
                HL
Sbjct:   295 LTEHL 299

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F5H2M4 ZNF254 "Zinc finger protein 254" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 88/278 (31%), Positives = 128/278 (46%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             YKC  C K F  S++  +H + H R   +KC  C KA+     L RH   H   + ++C+
Sbjct:   209 YKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCE 268

Query:    66 SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
              CG+ F     L  H++IH   K +KC +C ++FK    L  H + H   K++ C +C K
Sbjct:   269 ECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGK 328

Query:   125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
              F   S+L  H I+H   + +KC  C K F+  + L KH  +H   + + C+ C   F  
Sbjct:   329 GFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIW 388

Query:   185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
              + L RH R H      + C+ CG+ F     L  H KIIH     + C  CG   N + 
Sbjct:   389 SSTLTRHKRMHTG-EKPYKCEECGKSFSQSSTLTTH-KIIHTGEKPYKCEECGKAFNWSS 446

Query:   242 DYASHLLIIHNIESSQQVEK--NLNNMYNLLTTHIEYH 277
                 H  IIH  E   + EK        ++LT H   H
Sbjct:   447 TLTKHK-IIHTEEKPYKCEKCGKAFKQSSILTNHKRIH 483

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q9H8G1 ZNF430 "Zinc finger protein 430" [Homo sapiens (taxid:9606)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 91/327 (27%), Positives = 143/327 (43%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             Y+C  C KVF   ++  +H   H     +KC  C KA+     L  H + H   + +RC+
Sbjct:   233 YQCEECGKVFNWFSTLTRHRRIHTGEKPYKCEQCGKAFKQSSTLTTHKIIHTGEKPYRCE 292

Query:    66 SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
              CG+ F     L  H+ IH   K ++C +C  +F    HL  H + H   K + C +C K
Sbjct:   293 ECGKTFNRSSHLTTHKRIHTGEKPYRCEECGRAFNRSSHLTTHKIIHTGEKPYKCEECGK 352

Query:   125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
              F   S L  H I+H   + +KC  C K F   ++L KH I+H   + + C+ C   F  
Sbjct:   353 AFNQSSTLTTHKIIHAGEKPYKCEECGKAFYRFSYLTKHKIIHTGEKFYKCEECGKGFNW 412

Query:   185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
              + L +H R H      + C+ CG+ F     L AH KIIH     + C  CG   N + 
Sbjct:   413 SSTLTKHKRIHTG-EKPYKCEQCGKAFNESSNLTAH-KIIHTGEKPYKCEECGKAFNRSP 470

Query:   242 DYASHLLIIHNIESSQQVEK--NLNNMYNLLTTHIEYHHXXXXXXXXXXXXXGFMYNDET 299
                +H  +IH+ E   + E+     N ++ LT H +  H              F  +   
Sbjct:   471 KLTAHK-VIHSGEKPYKCEECGKAFNQFSNLTKH-KITHIGDTSYKYLECDKAFSQSSTL 528

Query:   300 SSYS--HIKQEDDSCDTYMDDTTENSN 324
             + +   H  ++  +C+ Y     ++SN
Sbjct:   529 TKHKVIHTGEKPYNCEEYGKAFNQSSN 555

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|O75437 ZNF254 "Zinc finger protein 254" [Homo sapiens (taxid:9606)]

 Score = 408 (148.7 bits), Expect = 1.4e-37, P = 1.4e-37
 Identities = 88/278 (31%), Positives = 128/278 (46%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             YKC  C K F  S++  +H + H R   +KC  C KA+     L RH   H   + ++C+
Sbjct:   294 YKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCE 353

Query:    66 SCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
              CG+ F     L  H++IH   K +KC +C ++FK    L  H + H   K++ C +C K
Sbjct:   354 ECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGK 413

Query:   125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
              F   S+L  H I+H   + +KC  C K F+  + L KH  +H   + + C+ C   F  
Sbjct:   414 GFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIW 473

Query:   185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
              + L RH R H      + C+ CG+ F     L  H KIIH     + C  CG   N + 
Sbjct:   474 SSTLTRHKRMHTG-EKPYKCEECGKSFSQSSTLTTH-KIIHTGEKPYKCEECGKAFNWSS 531

Query:   242 DYASHLLIIHNIESSQQVEK--NLNNMYNLLTTHIEYH 277
                 H  IIH  E   + EK        ++LT H   H
Sbjct:   532 TLTKHK-IIHTEEKPYKCEKCGKAFKQSSILTNHKRIH 568

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=TAS

ZFIN|ZDB-GENE-110913-125 si:dkeyp-53e4.2 "si:dkeyp-53e4.2" [Danio rerio (taxid:7955)]

 Score = 403 (146.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 85/282 (30%), Positives = 134/282 (47%)

Query:     2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS 61
             E+  + C  C K F    SF  HM+ H   ++  C  C K+   + ++ +H+ TH+    
Sbjct:   193 EEKPFACAQCGKSFTTKASFMNHMDGHTGTIVFTCDQCGKSLTRKDSMKQHMKTHSGEDR 252

Query:    62 FRCKSCGRRFESEELLIVHQVIHER-KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCP 120
             FRC  CG+ F+ +  L +H  +H R K   CTQC ++F    HL QH+  H   K F C 
Sbjct:   253 FRCSECGKGFKYKSKLKIHMRVHNREKLFTCTQCGKNFNQSSHLNQHMRIHTGEKPFTCT 312

Query:   121 KCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHL 180
             +C K F + ++L  H+ +H   +   C  C K F + A+L++H+ +H   +   C  C  
Sbjct:   313 QCGKSFSYSANLNQHMRIHTGEKPFTCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGK 372

Query:   181 TFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKII--HNLFTCIHCGDTLN 238
             +F+  + L +HMR H       TC  CG+ F     L  H++I      FTC  CG + +
Sbjct:   373 SFSQSSYLNQHMRIHTG-EKPFTCSQCGKSFSQSPYLNQHMRIHTGEKPFTCSQCGKSFS 431

Query:   239 NAKDYASHLLIIHNIE---SSQQVEKNLNNMYNLLTTHIEYH 277
              +     H+ I H  E   +  Q  K+ +   NL   H+  H
Sbjct:   432 QSSSLYLHMRI-HTGEKPFTCTQCGKSFSKSSNL-NIHMRNH 471

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-071004-11 zgc:171220 "zgc:171220" [Danio rerio (taxid:7955)]

 Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
 Identities = 94/283 (33%), Positives = 137/283 (48%)

Query:     3 KTLYKCLYCHKVFKKSTSFDKH-MEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS 61
             K  + C  C KVF+  +   +H +  HN   L  C  C K++ +E  LD+HL +H   RS
Sbjct:    61 KGSFTCSECGKVFRIESWLKRHTLMVHNGETLLTCSPCGKSFINEAKLDKHLKSHTRNRS 120

Query:    62 FRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHC 119
             F C  CG+ F+SE+ L  H  IH  ER F  C+ C +SFK + +L QH   +  VK   C
Sbjct:   121 FTCTECGKIFKSEDKLNNHVRIHDKERPF-SCSVCGKSFKTEHNLSQHQRVYCDVKPLSC 179

Query:   120 PKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCH 179
              +C K F   S L+ H++VH     + C  C K F++   L+ H   H   + H C  C 
Sbjct:   180 DQCHKTFLSRSLLKLHLVVHSGERPYVCSLCGKSFLYLNRLNAHERNHAEVKPHVCSLCG 239

Query:   180 LTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIH---NLFTCIHCGDT 236
              +F   N L  H   H    + H C  CG+ F     LK H + +H   N F+C HCG T
Sbjct:   240 KSFLYMNRLKEHELIHSGVRS-HVCPHCGKSFSTKRNLKKH-QSVHVEVNPFSCTHCGKT 297

Query:   237 LNNAKDYASHLLIIHNIES--SQQVEKNLNNMYNLLTTHIEYH 277
               N +   +HL+    ++S    Q +K+     + L  H++ H
Sbjct:   298 FRNKRSVQNHLIAHAGVKSFSCDQCDKSFIRA-SYLNRHLKVH 339

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|P17019 ZNF708 "Zinc finger protein 708" [Homo sapiens (taxid:9606)]

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 88/279 (31%), Positives = 128/279 (45%)

Query:     6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
             YKC  C K FK+S++   H + H     +KC  C KA+    +L  H   H   + ++C+
Sbjct:   280 YKCEECGKAFKQSSNLTNHKKIHTGEKPYKCGECGKAFTLSSHLTTHKRIHTGEKPYKCE 339

Query:    66 SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
              CG+ F     L  H++IH E K +KC +C ++F    HL  H + H   K + C +C K
Sbjct:   340 ECGKAFSVFSTLTKHKIIHTEEKPYKCEECGKAFNRSSHLTNHKVIHTGEKPYKCEECGK 399

Query:   125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT 184
              F   S L  H ++H   + +KC  C K F   + L KH ++H   + + C+ C  TF  
Sbjct:   400 AFTKSSTLTYHKVIHTGKKPYKCEECGKAFSIFSILTKHKVIHTEDKPYKCEECGKTFNY 459

Query:   185 DNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAK 241
              ++   H + H      + C+ CG+ FI    L  H KIIH     + C  CG   N + 
Sbjct:   460 SSNFTNHKKIHTG-EKPYKCEECGKSFILSSHLTTH-KIIHTGEKPYKCKECGKAFNQSS 517

Query:   242 DYASHLLIIHNIESSQQVE---KNLNNMYNLLTTHIEYH 277
                 H  IIH  E   + E   K  N   NL T H   H
Sbjct:   518 TLMKHK-IIHTGEKPYKCEECGKAFNQSPNL-TKHKRIH 554

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	367
KOG3608|consensus	467		99.95
KOG1074|consensus	958		99.95
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.94
KOG2462|consensus	279		99.94
KOG1074|consensus	958		99.94
KOG3623|consensus	1007		99.89
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.69
KOG3576|consensus	267		99.66
PLN03086	567	PRLI-interacting factor K; Provisional	99.33
PLN03086	567	PRLI-interacting factor K; Provisional	99.31
PHA00733	128	hypothetical protein	99.05
PHA00733	128	hypothetical protein	99.02
KOG3993|consensus	500		99.0
KOG3993|consensus	500		98.88
PHA02768	55	hypothetical protein; Provisional	98.8
PHA02768	55	hypothetical protein; Provisional	98.72
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.52
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.43
PHA00616	44	hypothetical protein	98.37
PHA00732	79	hypothetical protein	98.25
PHA00732	79	hypothetical protein	98.24
PHA00616	44	hypothetical protein	98.18
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.1
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.02
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.66
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.55
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.53
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.49
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.45
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.41
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.26
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.08
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.99
KOG2231|consensus	669		96.76
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.76
smart00355	26	ZnF_C2H2 zinc finger.	96.71
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.67
KOG1146|consensus	1406		96.67
KOG1146|consensus	1406		96.64
KOG2231|consensus	669		96.44
smart00355	26	ZnF_C2H2 zinc finger.	96.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.39
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.38
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.27
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.21
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.19
KOG2482|consensus	423		96.12
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.05
PRK04860	160	hypothetical protein; Provisional	95.55
KOG2785|consensus	390		95.38
KOG2785|consensus	390		95.35
KOG4173|consensus	253		95.23
PRK04860	160	hypothetical protein; Provisional	95.05
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.93
KOG2482|consensus	423		94.28
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.89
COG5048	467	FOG: Zn-finger [General function prediction only]	93.72
COG5048	467	FOG: Zn-finger [General function prediction only]	93.55
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.26
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.36
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.28
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.82
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	90.44
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	90.39
KOG2893|consensus	341		89.83
KOG4173|consensus	253		89.56
KOG2893|consensus	341		89.38
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	88.99
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	87.74
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	87.42
COG4049	65	Uncharacterized protein containing archaeal-type C	85.8
COG4049	65	Uncharacterized protein containing archaeal-type C	84.63
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	83.3
KOG2186|consensus	276		83.19
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	82.76

>KOG3608|consensus

Probab=99.95  E-value=6.7e-28  Score=206.01  Aligned_cols=242  Identities=26%  Similarity=0.546  Sum_probs=208.3

Q ss_pred             cccccc--cccccCC-HHHHHHHHHhcCC----------------------------------CCceec--ccccccccC
Q psy2876          33 LHKCHL--CTKAYPS-EKNLDRHLLTHNV----------------------------------RRSFRC--KSCGRRFES   73 (367)
Q Consensus        33 ~~~C~~--C~~~f~~-~~~l~~H~~~h~~----------------------------------~~~~~C--~~C~~~f~~   73 (367)
                      -++|..  |++...+ ...|.+|...|--                                  ...|.|  ..|+..|.+
T Consensus        69 e~qC~w~~C~f~~~~~s~~l~RHvy~H~y~~~l~q~G~~al~~~~dig~c~~~f~~~~~ip~~g~~f~C~WedCe~~F~s  148 (467)
T KOG3608|consen   69 EHQCTWNSCDFRTENSSADLIRHVYFHCYHTKLKQQGKLALDLHPDIGACTAPFRLMEKIPALGQNFRCGWEDCEREFVS  148 (467)
T ss_pred             ceeEEeccCCccccchHHHHHhhhhhhhhHHHHHHHHHHHHhcCCCcCcccCCcchhhccccchhhhccChhhcCCcccC
Confidence            366664  8877766 5889999876620                                  122556  359999999


Q ss_pred             HHHHHHHHHHhc-------------C-ccccccc--cccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhh
Q psy2876          74 EELLIVHQVIHE-------------R-KFHKCTQ--CEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVI  137 (367)
Q Consensus        74 ~~~L~~H~~~h~-------------~-~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  137 (367)
                      ...|..|+..|.             + ..+.|..  |-+.+.++..|++|++.|.++|...|+.||..|+++..|..|++
T Consensus       149 ~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~r  228 (467)
T KOG3608|consen  149 IVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLR  228 (467)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHH
Confidence            999999987763             1 2355654  88999999999999999999999999999999999999999986


Q ss_pred             c--cCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccCCHH
Q psy2876         138 V--HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDL  215 (367)
Q Consensus       138 ~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~  215 (367)
                      .  -....+|.|..|.+.|.+...|..|+..|-  .-|+|++|+.+....+.|.+|++..+..++||+|+.|++.|.+.+
T Consensus       229 Rqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~es  306 (467)
T KOG3608|consen  229 RQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRES  306 (467)
T ss_pred             hhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHH
Confidence            4  345668999999999999999999999994  569999999999999999999998887789999999999999999


Q ss_pred             HHHHHHHhcCC--cccccc--cccccCCHHHHHHhHhhhcCC--CCCcchhHhHHHHHH--HHHHHH-hhh
Q psy2876         216 KLKAHIKIIHN--LFTCIH--CGDTLNNAKDYASHLLIIHNI--ESSQQVEKNLNNMYN--LLTTHI-EYH  277 (367)
Q Consensus       216 ~l~~H~~~~H~--~~~C~~--C~~~f~~~~~l~~H~~~~H~~--~~~~~C~~C~~~~~~--~l~~H~-~~h  277 (367)
                      +|.+|+. +|.  .|.|..  |.++|++..+|++|++.+|.|  +.+|.|-.|++.|.+  .|..|+ +.|
T Consensus       307 dL~kH~~-~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  307 DLAKHVQ-VHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             HHHHHHH-hccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhh
Confidence            9999999 887  899998  999999999999999888854  457999999999999  899996 444

>KOG1074|consensus

Probab=99.95  E-value=1e-29  Score=238.86  Aligned_cols=52  Identities=40%  Similarity=0.818  Sum_probs=38.1

Q ss_pred             ccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE   85 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (367)
                      .+|.+|.+.|.+.+.|+.|+++|++++||+|.+||..|+++.+|+.|...|.
T Consensus       354 hkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~  405 (958)
T KOG1074|consen  354 HKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHR  405 (958)
T ss_pred             chhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecc
Confidence            4677777777777777777777777777777777777777777777766554

>KOG3608|consensus

Probab=99.95  E-value=8.1e-28  Score=205.50  Aligned_cols=218  Identities=27%  Similarity=0.538  Sum_probs=181.3

Q ss_pred             cccc--ccccccCCHHHHHHHHHHhCC------------C-ccccccc--cccccCCHHHHHHHHHhcCCCCceeccccc
Q psy2876           6 YKCL--YCHKVFKKSTSFDKHMEHHNR------------N-VLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKSCG   68 (367)
Q Consensus         6 ~~C~--~C~~~f~~~~~l~~H~~~h~~------------~-~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   68 (367)
                      |.|.  .|+..|.+...|..|...|..            + ..+.|..  |-+.+.+++.|++|++.|++++...|+.||
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            4554  499999999999999887742            1 2356665  999999999999999999999999999999


Q ss_pred             ccccCHHHHHHHHHHhc---CccccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhc-cCCCcc
Q psy2876          69 RRFESEELLIVHQVIHE---RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIV-HDESEV  144 (367)
Q Consensus        69 ~~f~~~~~L~~H~~~h~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~  144 (367)
                      ..|++...|-.|.+..+   ..+|.|..|.+.|.+...|..|+..|-  .-|+|+.|+.+....++|..|++. |..++|
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkp  292 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKP  292 (467)
T ss_pred             HHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCC
Confidence            99999999999987765   678999999999999999999999885  458899999998888999988875 677888


Q ss_pred             eeccccccccCCHHHHHHHHHHhCCCCCccCCc--cccccCChHHHHHHHHHHhcc--CCcccccccccccCCHHHHHHH
Q psy2876         145 HKCLYCFKVFVHKAHLDKHLILHETSEMHNCDF--CHLTFTTDNDLIRHMRSHEEY--HTKHTCDICGEKFINDLKLKAH  220 (367)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~--~~~~~C~~C~~~f~~~~~l~~H  220 (367)
                      |+|+.|++.+.+.+.|.+|..+|. +..|+|..  |.+.|.+...|++|++.++..  .-+|.|..|++.|.+-.+|..|
T Consensus       293 fKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~H  371 (467)
T KOG3608|consen  293 FKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAH  371 (467)
T ss_pred             ccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHH
Confidence            888888888888888888888887 66788877  888888888888888876632  2457788888777777777777


Q ss_pred             HHhcCC
Q psy2876         221 IKIIHN  226 (367)
Q Consensus       221 ~~~~H~  226 (367)
                      +...|+
T Consensus       372 L~kkH~  377 (467)
T KOG3608|consen  372 LMKKHG  377 (467)
T ss_pred             HHHhhc
Confidence            775555

>KOG2462|consensus

Probab=99.94  E-value=1.3e-27  Score=199.44  Aligned_cols=132  Identities=28%  Similarity=0.555  Sum_probs=71.3

Q ss_pred             cccccccccccCCHHHHHHHHHHccC---CcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHH
Q psy2876          88 FHKCTQCEESFKNKKHLKQHLLAHEK---VKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHL  164 (367)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  164 (367)
                      .|+|+.|++.+.+.++|.+|.++|-.   .+.+.|+.|++.|.+...|..|+++|.  -+.+|.+||+.|.....|+-|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            34555555555555555555554432   234555555555555555555555554  3455555555555555555555


Q ss_pred             HHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHHHHH
Q psy2876         165 ILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIK  222 (367)
Q Consensus       165 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  222 (367)
                      ++|+|++||.|+.|++.|.++++|+.||++|.+. ++|+|..|++.|..++.|.+|..
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~-K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDV-KKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCC-ccccCcchhhHHHHHHHHHHhhh
Confidence            5555555555555555555555555555555555 45555555555555555555544

>KOG2462|consensus

Probab=99.94  E-value=1.5e-27  Score=199.13  Aligned_cols=128  Identities=28%  Similarity=0.597  Sum_probs=78.3

Q ss_pred             ceeCCCCCCccCChhhhhhhhhccCC---CcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHH
Q psy2876         116 VFHCPKCPKLFRHESHLQNHVIVHDE---SEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHM  192 (367)
Q Consensus       116 ~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  192 (367)
                      .|.|+.|++.+.+.++|.+|.++|-.   .+.+.|++|++.|.+...|..|+++|.  -+..|.+||+.|...+.|..|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhccc
Confidence            45666666666666666666665532   344566666666666666666666664  4556666666666666666666


Q ss_pred             HHHhccCCcccccccccccCCHHHHHHHHHhcCC---cccccccccccCCHHHHHHhH
Q psy2876         193 RSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN---LFTCIHCGDTLNNAKDYASHL  247 (367)
Q Consensus       193 ~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~---~~~C~~C~~~f~~~~~l~~H~  247 (367)
                      |+|+|+ +||.|+.|++.|.++++|+.|++ +|.   +|+|..|+++|...+-|.+|.
T Consensus       208 RTHTGE-KPF~C~hC~kAFADRSNLRAHmQ-THS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  208 RTHTGE-KPFSCPHCGKAFADRSNLRAHMQ-THSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             ccccCC-CCccCCcccchhcchHHHHHHHH-hhcCCccccCcchhhHHHHHHHHHHhh
Confidence            666666 66666666666666666666666 554   566666666666666666665

>KOG1074|consensus

Probab=99.94  E-value=1.6e-27  Score=224.13  Aligned_cols=196  Identities=17%  Similarity=0.340  Sum_probs=159.0

Q ss_pred             cccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCC----cceecc---ccccccCCHHHH
Q psy2876          88 FHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDES----EVHKCL---YCFKVFVHKAHL  160 (367)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~~~~l  160 (367)
                      +-+|-+|.++.+-.+.|+.|.++|+|++||+|.+||+.|.++.+|+.||.+|...    -.+.|+   +|.+.|.....|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            3569999999999999999999999999999999999999999999999988654    347899   999999999999


Q ss_pred             HHHHHHhCCC-C------------CccCCccccccCChHHHHHHHHHHhcc---------------CC----cccccccc
Q psy2876         161 DKHLILHETS-E------------MHNCDFCHLTFTTDNDLIRHMRSHEEY---------------HT----KHTCDICG  208 (367)
Q Consensus       161 ~~H~~~h~~~-~------------~~~C~~C~~~f~~~~~L~~H~~~h~~~---------------~~----~~~C~~C~  208 (367)
                      ..|++.|.+. .            .-+|..|.+.|.....+..++-.|.+.               ..    +..+..|+
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~  764 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCG  764 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccc
Confidence            9999998732 1            146999999999888888887766111               01    34455566


Q ss_pred             cccCCHHHHHHHHHhc--CC------------------------------------------------------------
Q psy2876         209 EKFINDLKLKAHIKII--HN------------------------------------------------------------  226 (367)
Q Consensus       209 ~~f~~~~~l~~H~~~~--H~------------------------------------------------------------  226 (367)
                      ..+.....+..+-...  +.                                                            
T Consensus       765 ~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~  844 (958)
T KOG1074|consen  765 RELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATK  844 (958)
T ss_pred             cccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccc
Confidence            5555444333322200  00                                                            


Q ss_pred             ----------------------------------cccccccccccCCHHHHHHhHhhhcCCCCCcchhHhHHHHHH--HH
Q psy2876         227 ----------------------------------LFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYN--LL  270 (367)
Q Consensus       227 ----------------------------------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~--~l  270 (367)
                                                        ...|.+|++.|.+.+.|..|+ ++|++++||.|..|++.|..  .|
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~-rTHtg~KPF~C~fC~~aFttrgnL  923 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHM-RTHTGPKPFFCHFCEEAFTTRGNL  923 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhh-hcCCCCCCccchhhhhhhhhhhhh
Confidence                                              168999999999999999999 99999999999999999999  99


Q ss_pred             HHHHhhhcCCCCCC
Q psy2876         271 TTHIEYHHSQNNIE  284 (367)
Q Consensus       271 ~~H~~~h~~~~~~~  284 (367)
                      +.||.+|....|+.
T Consensus       924 KvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  924 KVHMGTHMWVQPPS  937 (958)
T ss_pred             hhhhccccccCCCc
Confidence            99999999877653

>KOG3623|consensus

Probab=99.89  E-value=4e-23  Score=191.63  Aligned_cols=105  Identities=29%  Similarity=0.669  Sum_probs=88.2

Q ss_pred             cccccccccccCCHHHHHHHHHHh--CCCccccccccccccCCHHHHHHHHHhcCC-------------CCceecccccc
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHH--NRNVLHKCHLCTKAYPSEKNLDRHLLTHNV-------------RRSFRCKSCGR   69 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h--~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~~   69 (367)
                      ...|++|++.+.....|+.|++.-  ..+..|.|..|.++|..+..|.+||.+|..             .+.|+|.+||+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            357999999999999999997633  345568999999999999999999998853             25588888888


Q ss_pred             cccCHHHHHHHHHHhc-CccccccccccccCCHHHHHHHHH
Q psy2876          70 RFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLL  109 (367)
Q Consensus        70 ~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~  109 (367)
                      .|..+-.|+.|+|+|. ++||.|+.|++.|+....+..||.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            8888888888888887 888888888888888888888874

>KOG3623|consensus

Probab=99.87  E-value=1.2e-22  Score=188.60  Aligned_cols=104  Identities=25%  Similarity=0.594  Sum_probs=94.1

Q ss_pred             eecccccccccCHHHHHHHHHHhc---CccccccccccccCCHHHHHHHHHHccC-------------CcceeCCCCCCc
Q psy2876          62 FRCKSCGRRFESEELLIVHQVIHE---RKFHKCTQCEESFKNKKHLKQHLLAHEK-------------VKVFHCPKCPKL  125 (367)
Q Consensus        62 ~~C~~C~~~f~~~~~L~~H~~~h~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~C~~~  125 (367)
                      ..|+.|++.+.....|+.|++..+   +..|.|..|.++|.....|.+||.+|..             .+.|+|++|++.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            579999999999999999987654   5679999999999999999999998753             245999999999


Q ss_pred             cCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHH
Q psy2876         126 FRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLI  165 (367)
Q Consensus       126 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  165 (367)
                      |..+..|+.|+++|.|++||.|+-|+++|+....+..||.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999999999999999999988888874

>KOG3576|consensus

Probab=99.69  E-value=8.5e-18  Score=133.69  Aligned_cols=111  Identities=32%  Similarity=0.622  Sum_probs=95.0

Q ss_pred             CCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHHH
Q psy2876         141 ESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAH  220 (367)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H  220 (367)
                      +...|.|.+|++.|.....|.+|++-|...+.|-|..||+.|.+..+|.+|+++|+|. +||+|..|++.|...-+|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgv-rpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGV-RPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCc-cccchhhhhHHHHhhccHHHH
Confidence            3456888899999988888889998888888888999999998888999999999888 889999999999988889999


Q ss_pred             HHhcCC-------------cccccccccccCCHHHHHHhHhhhcC
Q psy2876         221 IKIIHN-------------LFTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       221 ~~~~H~-------------~~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      ++.+|+             .|.|+.||++-.....+..|+...|.
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            888887             58899999999999999999844443

>KOG3576|consensus

Probab=99.66  E-value=4.6e-17  Score=129.52  Aligned_cols=109  Identities=26%  Similarity=0.519  Sum_probs=79.0

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHH-
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQV-   82 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-   82 (367)
                      ..|.|.+|++.|.-..-|.+||+-|..-+.|.|..||+.|....+|.+|+++|+|.+||+|..|++.|...-.|..|++ 
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~k  195 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKK  195 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHH
Confidence            3577888888888888888888888877778888888888888888888888888888888888888888888888864 


Q ss_pred             Hhc-----------CccccccccccccCCHHHHHHHHHHcc
Q psy2876          83 IHE-----------RKFHKCTQCEESFKNKKHLKQHLLAHE  112 (367)
Q Consensus        83 ~h~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~  112 (367)
                      +|.           .+.|.|+.||.+......+..|++.++
T Consensus       196 vhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  196 VHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             HcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            332           344555555555555555555555544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.33  E-value=2.5e-12  Score=121.30  Aligned_cols=60  Identities=27%  Similarity=0.579  Sum_probs=27.8

Q ss_pred             eCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcccccc
Q psy2876         118 HCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTF  182 (367)
Q Consensus       118 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  182 (367)
                      .|+.|++.|. ...|..|+.+++  .++.|+ |++.+ .+..|..|+..|.+.+++.|..|++.|
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            4445544443 344444444442  344454 54322 334444454444444555555555444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.31  E-value=6.8e-12  Score=118.43  Aligned_cols=147  Identities=18%  Similarity=0.437  Sum_probs=113.7

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCCCceeccc--ccccccCHHHHHHHHHHhcCccccccccccccCCHHHHHHHHHH
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS--CGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLA  110 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  110 (367)
                      .-.|+.|...... ..|..|..... .....|+.  |+..|.. ..+..|        +.|+.|++.|. ...|..|+.+
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe~~C~-r~~V~Cp~~~Cg~v~~r-~el~~H--------~~C~~Cgk~f~-~s~LekH~~~  474 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHEAYCS-RHNVVCPHDGCGIVLRV-EEAKNH--------VHCEKCGQAFQ-QGEMEKHMKV  474 (567)
T ss_pred             eEECCCCCCccch-hHHHHHHhhCC-CcceeCCcccccceeec-cccccC--------ccCCCCCCccc-hHHHHHHHHh
Confidence            3479999887765 56778885543 34467884  9998853 334444        58999999996 6789999999


Q ss_pred             ccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccC----------CHHHHHHHHHHhCCCCCccCCcccc
Q psy2876         111 HEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFV----------HKAHLDKHLILHETSEMHNCDFCHL  180 (367)
Q Consensus       111 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~C~~  180 (367)
                      ++  +++.|+ |+..+ ....|..|+.+|.+.+++.|+.|++.|.          ....|..|.... +.+++.|..|++
T Consensus       475 ~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        475 FH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             cC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCC
Confidence            85  789999 99755 6689999999999999999999999885          245788898885 888899999998


Q ss_pred             ccCChHHHHHHHHHHhc
Q psy2876         181 TFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       181 ~f~~~~~L~~H~~~h~~  197 (367)
                      .|..+ .|..|+-..|.
T Consensus       550 ~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        550 SVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             eeeeh-hHHHHHHHhhc
Confidence            88765 57778765543

>PHA00733 hypothetical protein

Probab=99.05  E-value=2.3e-10  Score=88.41  Aligned_cols=82  Identities=21%  Similarity=0.354  Sum_probs=40.4

Q ss_pred             CcceeccccccccCCHHHHHHH--HH---HhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccCCHHH
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKH--LI---LHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLK  216 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~  216 (367)
                      .+++.|.+|...|.....|..+  +.   .+.+.+||.|+.|++.|.+...|..|++.+  . .+|.|+.|++.|.....
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~-~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--E-HSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--C-cCccCCCCCCccCCHHH
Confidence            3445555555555544433333  11   122345555555555555555555555543  1 34555555555555555


Q ss_pred             HHHHHHhcCC
Q psy2876         217 LKAHIKIIHN  226 (367)
Q Consensus       217 l~~H~~~~H~  226 (367)
                      |..|+...|+
T Consensus       115 L~~H~~~~h~  124 (128)
T PHA00733        115 TLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHhcC
Confidence            5555554443

>PHA00733 hypothetical protein

Probab=99.02  E-value=3.3e-10  Score=87.55  Aligned_cols=57  Identities=16%  Similarity=0.385  Sum_probs=42.5

Q ss_pred             CCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         140 DESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       140 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      .+.+||.|+.|++.|.+...|..|++.+  ..+|.|+.|++.|.....|..|+...|+.
T Consensus        69 ~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~~  125 (128)
T PHA00733         69 KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHNI  125 (128)
T ss_pred             CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcCc
Confidence            3466777888888888888887777765  34678888888888888888887776653

>KOG3993|consensus

Probab=99.00  E-value=4.8e-11  Score=105.67  Aligned_cols=52  Identities=27%  Similarity=0.556  Sum_probs=36.0

Q ss_pred             ccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE   85 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (367)
                      |.|..|...|.+...|.+|.-.-.....|+|++|++.|+...+|..|.+.|.
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            6777777777777777777644334455777777777777777777777664

>KOG3993|consensus

Probab=98.88  E-value=1.5e-10  Score=102.55  Aligned_cols=194  Identities=18%  Similarity=0.212  Sum_probs=121.5

Q ss_pred             ceecccccccccCHHHHHHHHHHhc-CccccccccccccCCHHHHHHHHHHccCCccee---CCCCCCccCChhhhhhhh
Q psy2876          61 SFRCKSCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFH---CPKCPKLFRHESHLQNHV  136 (367)
Q Consensus        61 ~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~---C~~C~~~f~~~~~l~~H~  136 (367)
                      .|.|..|...|.+...|.+|.-..- .-.|+|+.|+++|+-..+|..|.+.|.....-.   -+.=.....+....+.-.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            4889999999999999999953322 345899999999999999999998875321100   000000000111111101


Q ss_pred             hc--cCCCcceeccccccccCCHHHHHHHHHHhCCCC-----------------CccCCccccccCChHHHHHHHHHHhc
Q psy2876         137 IV--HDESEVHKCLYCFKVFVHKAHLDKHLILHETSE-----------------MHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       137 ~~--h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----------------~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      +.  ...+..|.|..|++.|.....|++|+.+|+...                 .+.|..|.-.+...+.-..+...+.+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence            10  123447999999999999999999988875321                 13355555544444333333333333


Q ss_pred             cCCcccccccccccCCHHHHHHHHHhcCC--cccccccccccCCHHHHHHhHhhhcCCC
Q psy2876         198 YHTKHTCDICGEKFINDLKLKAHIKIIHN--LFTCIHCGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       198 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~--~~~C~~C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ......|++|+..+.++..--.+.+.-+.  .|.|.+|.-.|.+...|.+|+...|..+
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse  485 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSE  485 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHH
Confidence            33445677888777766555444432222  6889999999999999999987778654

>PHA02768 hypothetical protein; Provisional

Probab=98.80  E-value=2.2e-09  Score=68.10  Aligned_cols=42  Identities=24%  Similarity=0.478  Sum_probs=25.5

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHH
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNL   49 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   49 (367)
                      |+|+.||+.|...++|..||++|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            566666666666666666666665  456666666666554443

>PHA02768 hypothetical protein; Provisional

Probab=98.72  E-value=6.4e-09  Score=65.99  Aligned_cols=42  Identities=14%  Similarity=0.328  Sum_probs=22.6

Q ss_pred             eeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHH
Q psy2876         145 HKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDL  188 (367)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  188 (367)
                      |.|+.||+.|...+.|..|++.|+  ++|+|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            455555555555555555555554  455555555555544433

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.52  E-value=6.4e-08  Score=52.40  Aligned_cols=24  Identities=29%  Similarity=0.678  Sum_probs=14.0

Q ss_pred             HHHHHHHhCCCccccccccccccC
Q psy2876          21 FDKHMEHHNRNVLHKCHLCTKAYP   44 (367)
Q Consensus        21 l~~H~~~h~~~~~~~C~~C~~~f~   44 (367)
                      |.+||++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            555555666666666666655554

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.43  E-value=1.8e-07  Score=50.66  Aligned_cols=26  Identities=38%  Similarity=0.942  Sum_probs=23.2

Q ss_pred             HHHHHHHhcCCCCceecccccccccC
Q psy2876          48 NLDRHLLTHNVRRSFRCKSCGRRFES   73 (367)
Q Consensus        48 ~l~~H~~~h~~~~~~~C~~C~~~f~~   73 (367)
                      +|.+||++|++++||.|+.|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999863

...

>PHA00616 hypothetical protein

Probab=98.37  E-value=1.9e-07  Score=56.29  Aligned_cols=33  Identities=21%  Similarity=0.505  Sum_probs=18.9

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCcccccc
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCH   37 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   37 (367)
                      ||+|..||+.|...+.|..|++.|++++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            455555555555555555555555555555544

>PHA00732 hypothetical protein

Probab=98.25  E-value=6.7e-07  Score=62.57  Aligned_cols=37  Identities=24%  Similarity=0.561  Sum_probs=17.1

Q ss_pred             ccCCccccccCChHHHHHHHHHHhccCCcccccccccccC
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFI  212 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~  212 (367)
                      |.|+.|++.|.+...|..|++.++.   ++.|+.|++.|.
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~   38 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR   38 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC
Confidence            4455555555555555555443211   234555555544

>PHA00732 hypothetical protein

Probab=98.24  E-value=7.6e-07  Score=62.28  Aligned_cols=47  Identities=28%  Similarity=0.680  Sum_probs=32.5

Q ss_pred             cccccccccccCCHHHHHHHHHH-hCCCccccccccccccCCHHHHHHHHHhcC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEH-HNRNVLHKCHLCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   57 (367)
                      ||+|+.|++.|.+...|..|++. |.   ++.|+.|++.|.   .|..|+.+..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            57777888888777777777774 44   246777777776   4667775543

>PHA00616 hypothetical protein

Probab=98.18  E-value=6.4e-07  Score=54.03  Aligned_cols=40  Identities=18%  Similarity=0.325  Sum_probs=34.3

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCCCceeccccccccc
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFE   72 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   72 (367)
                      ||+|+.||+.|...++|..|++.|++++++.|+.=-..|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f~   40 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYFR   40 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEEE
Confidence            6899999999999999999999999999998876544443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.10  E-value=4.4e-06  Score=54.25  Aligned_cols=49  Identities=20%  Similarity=0.248  Sum_probs=24.6

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCCC-CCcchhHhHHHHHHHHHHHHhhh
Q psy2876         228 FTCIHCGDTLNNAKDYASHLLIIHNIE-SSQQVEKNLNNMYNLLTTHIEYH  277 (367)
Q Consensus       228 ~~C~~C~~~f~~~~~l~~H~~~~H~~~-~~~~C~~C~~~~~~~l~~H~~~h  277 (367)
                      |.|++|++ ..+...|..|+...|..+ +.+.|+.|...+...|..|+..+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~~l~~Hl~~~   52 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVTDNLIRHLNSQ   52 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhhhHHHHHHHHh
Confidence            45555555 333445555554555443 34555555554444555555443

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.02  E-value=7.3e-06  Score=53.19  Aligned_cols=51  Identities=20%  Similarity=0.491  Sum_probs=33.8

Q ss_pred             CccCCccccccCChHHHHHHHHHHhc-cCCcccccccccccCCHHHHHHHHHhcC
Q psy2876         172 MHNCDFCHLTFTTDNDLIRHMRSHEE-YHTKHTCDICGEKFINDLKLKAHIKIIH  225 (367)
Q Consensus       172 ~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~H  225 (367)
                      .|.||.|++. .+...|..|....|. +.+.+.||+|...+.  .+|..|+...|
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            4778888884 456678888665443 335677888877544  36777777555

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.83  E-value=1.3e-05  Score=41.94  Aligned_cols=22  Identities=36%  Similarity=0.878  Sum_probs=13.5

Q ss_pred             ccccccccccCCHHHHHHHHHH
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEH   27 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~   27 (367)
                      |+|+.|++.|.++..|..||+.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.66  E-value=2.7e-05  Score=40.74  Aligned_cols=22  Identities=41%  Similarity=0.868  Sum_probs=12.2

Q ss_pred             ccccccccccCCHHHHHHHHHh
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLT   55 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~   55 (367)
                      |.|+.|++.|.+...|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.55  E-value=5e-05  Score=56.34  Aligned_cols=21  Identities=29%  Similarity=0.819  Sum_probs=0.0

Q ss_pred             ccccccccCCHHHHHHHHHHh
Q psy2876           8 CLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         8 C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      |..|+..|.+...|..||...
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~   22 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKK   22 (100)
T ss_dssp             ---------------------
T ss_pred             ccccccccccccccccccccc
Confidence            555555555555555555433

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.53  E-value=6.8e-05  Score=55.62  Aligned_cols=73  Identities=15%  Similarity=0.375  Sum_probs=21.9

Q ss_pred             cccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhcCccccccccccccCCHHHHHHHHHHc
Q psy2876          35 KCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAH  111 (367)
Q Consensus        35 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  111 (367)
                      +|..|+..|.+...|..||...++-..-    ....+.....+..+.+......+.|..|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5999999999999999999775543211    112223444455554443445799999999999999999999864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.49  E-value=8.4e-05  Score=39.12  Aligned_cols=23  Identities=30%  Similarity=0.849  Sum_probs=11.1

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34555555555555555555543

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.45  E-value=6.1e-05  Score=41.11  Aligned_cols=24  Identities=25%  Similarity=0.605  Sum_probs=13.6

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      ||.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            455555555555555555555544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.41  E-value=0.00011  Score=38.69  Aligned_cols=23  Identities=35%  Similarity=0.843  Sum_probs=13.3

Q ss_pred             ccccccccccCCHHHHHHHHHhc
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h   56 (367)
                      |.|++|++.|.+...|..|+..|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.26  E-value=0.00017  Score=39.32  Aligned_cols=25  Identities=28%  Similarity=0.511  Sum_probs=15.3

Q ss_pred             cccccccccccCCHHHHHHHHHhcC
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~   57 (367)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666665553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.08  E-value=0.00013  Score=63.19  Aligned_cols=21  Identities=19%  Similarity=0.431  Sum_probs=14.5

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy2876         227 LFTCIHCGDTLNNAKDYASHL  247 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~  247 (367)
                      ||+|++|++++++...|+.|.
T Consensus       398 PYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         398 PYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ceeccccchhhccCccceecc
Confidence            677777777777766666664

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.99  E-value=0.00016  Score=62.59  Aligned_cols=21  Identities=19%  Similarity=0.052  Sum_probs=14.2

Q ss_pred             CCCcchhHhHHHHHH--HHHHHH
Q psy2876         254 ESSQQVEKNLNNMYN--LLTTHI  274 (367)
Q Consensus       254 ~~~~~C~~C~~~~~~--~l~~H~  274 (367)
                      .+||+|+.|+|++.+  .|+.|.
T Consensus       396 ~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         396 DKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CCceeccccchhhccCccceecc
Confidence            467777777777776  666664

>KOG2231|consensus

Probab=96.76  E-value=0.0034  Score=61.06  Aligned_cols=98  Identities=26%  Similarity=0.505  Sum_probs=55.0

Q ss_pred             CHHHHHHHHHHhCCCccccccccc---------cccCCHHHHHHHHHhcCC-CC----ceecccccccccCHHHHHHHHH
Q psy2876          17 KSTSFDKHMEHHNRNVLHKCHLCT---------KAYPSEKNLDRHLLTHNV-RR----SFRCKSCGRRFESEELLIVHQV   82 (367)
Q Consensus        17 ~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~l~~H~~~h~~-~~----~~~C~~C~~~f~~~~~L~~H~~   82 (367)
                      +...|+.||..-++  .+.|.+|-         ....+...|..|+..--. +.    --.|..|...|-....|..|++
T Consensus       126 s~~~Lk~H~~~~H~--~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~  203 (669)
T KOG2231|consen  126 SVENLKNHMRDQHK--LHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLR  203 (669)
T ss_pred             HHHHHHHHHHHhhh--hhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhc
Confidence            66777777754332  34455442         223455667777654211 11    1357777777777777777776


Q ss_pred             HhcCccccc---cccccccCCHHHHHHHHHHccCCcceeCC
Q psy2876          83 IHERKFHKC---TQCEESFKNKKHLKQHLLAHEKVKVFHCP  120 (367)
Q Consensus        83 ~h~~~~~~C---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  120 (367)
                      .++.--.-|   +.++.-|.....|..|.+..+    |.|.
T Consensus       204 ~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE  240 (669)
T KOG2231|consen  204 FDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCE  240 (669)
T ss_pred             cceeheeecCcccccchhcccchHHHHHhhhcC----cccc
Confidence            655332233   123345666677777776654    5555

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.76  E-value=0.0018  Score=56.94  Aligned_cols=128  Identities=29%  Similarity=0.535  Sum_probs=81.3

Q ss_pred             eeCCC--CCCccCChhhhhhhhhccCCCcceeccccc---ccc------CCHHHHHHHHHHhCCCCCc----cCCccccc
Q psy2876         117 FHCPK--CPKLFRHESHLQNHVIVHDESEVHKCLYCF---KVF------VHKAHLDKHLILHETSEMH----NCDFCHLT  181 (367)
Q Consensus       117 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f------~~~~~l~~H~~~h~~~~~~----~C~~C~~~  181 (367)
                      |.|+.  |.........|..|.+..++.  +.|.+|-   +.|      -++..|+.|...-..+..|    .|..|+..
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            55654  444444455666666654432  4555553   222      2355677776544333233    58999999


Q ss_pred             cCChHHHHHHHHHHhccCCcccccccc-------cccCCHHHHHHHHHhcCCcccccc--cc----cccCCHHHHHHhHh
Q psy2876         182 FTTDNDLIRHMRSHEEYHTKHTCDICG-------EKFINDLKLKAHIKIIHNLFTCIH--CG----DTLNNAKDYASHLL  248 (367)
Q Consensus       182 f~~~~~L~~H~~~h~~~~~~~~C~~C~-------~~f~~~~~l~~H~~~~H~~~~C~~--C~----~~f~~~~~l~~H~~  248 (367)
                      |.+.+.|..|++..|.     .|-+|+       ..|.+-.+|..|.+..|-  .|.+  |-    ..|.....|..|+.
T Consensus       230 FYdDDEL~~HcR~~HE-----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy--~ct~qtc~~~k~~vf~~~~el~~h~~  302 (493)
T COG5236         230 FYDDDELRRHCRLRHE-----ACHICDMVGPIRYQYFKSYEDLEAHFRNAHY--CCTFQTCRVGKCYVFPYHTELLEHLT  302 (493)
T ss_pred             ecChHHHHHHHHhhhh-----hhhhhhccCccchhhhhCHHHHHHHhhcCce--EEEEEEEecCcEEEeccHHHHHHHHH
Confidence            9999999999987664     255554       468888899999886653  3322  21    46888899999997


Q ss_pred             hhcCC
Q psy2876         249 IIHNI  253 (367)
Q Consensus       249 ~~H~~  253 (367)
                      ..|..
T Consensus       303 ~~h~~  307 (493)
T COG5236         303 RFHKV  307 (493)
T ss_pred             HHhhc
Confidence            77743

>smart00355 ZnF_C2H2 zinc finger

Probab=96.71  E-value=0.0017  Score=34.59  Aligned_cols=23  Identities=43%  Similarity=0.967  Sum_probs=13.1

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      |+|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35555666666555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.67  E-value=0.0019  Score=39.94  Aligned_cols=32  Identities=22%  Similarity=0.496  Sum_probs=20.3

Q ss_pred             CCccccccccccccCCHHHHHHHHHhcCCCCc
Q psy2876          30 RNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS   61 (367)
Q Consensus        30 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   61 (367)
                      .+.|-.|++|+..+....+|++|+...++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            35577888888888888888888877776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG1146|consensus

Probab=96.67  E-value=0.00043  Score=71.02  Aligned_cols=50  Identities=14%  Similarity=0.230  Sum_probs=28.2

Q ss_pred             eeccccccccC-CHHHHHHHHHHh------CCCCCccCCccccccCChHHHHHHHHH
Q psy2876         145 HKCLYCFKVFV-HKAHLDKHLILH------ETSEMHNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       145 ~~C~~C~~~f~-~~~~l~~H~~~h------~~~~~~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      +.|-.|+.-.. +...|..|..+-      .....|.|.+|.+....+.++..|.++
T Consensus       735 ~~civcd~~st~~l~~l~~h~~~~rs~ke~v~g~~~~c~l~~y~t~~kanfqlh~Kt  791 (1406)
T KOG1146|consen  735 FDCIVCDVFSTDRLDQLWFHNTRERSRKEQVPGDVPSCKLKPYATNTKANFQLHNKT  791 (1406)
T ss_pred             HHHhhhhhhhhhhHHHHhhcchhhhhhhhcccCCCCcceecccccccchhhhhhccc
Confidence            55777764333 233444454221      123357788888777777777776543

>KOG1146|consensus

Probab=96.64  E-value=0.0031  Score=65.06  Aligned_cols=105  Identities=18%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhC-------------------------CCCCccCCccccccCChHHHHHHHH
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHE-------------------------TSEMHNCDFCHLTFTTDNDLIRHMR  193 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------------------~~~~~~C~~C~~~f~~~~~L~~H~~  193 (367)
                      +...+.++|+.|+..|.....|..|++..+                         +.++|.|..|...+..+.+|.+|+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            334466777777777777777777776621                         2256888888888888888888876


Q ss_pred             HH--hc----------------------------------------cCCcccccccccccCCHHHHHHHHHhcCC---cc
Q psy2876         194 SH--EE----------------------------------------YHTKHTCDICGEKFINDLKLKAHIKIIHN---LF  228 (367)
Q Consensus       194 ~h--~~----------------------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~H~---~~  228 (367)
                      +-  ..                                        ..-.|.|.+|++...-...|+.|+...+.   |.
T Consensus       540 S~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~p~  619 (1406)
T KOG1146|consen  540 SDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSPPS  619 (1406)
T ss_pred             HHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCChH
Confidence            42  00                                        01237888888888888888888875443   23


Q ss_pred             cccccccccCCHHHH
Q psy2876         229 TCIHCGDTLNNAKDY  243 (367)
Q Consensus       229 ~C~~C~~~f~~~~~l  243 (367)
                      .+..++..+.....+
T Consensus       620 ~~Lq~~it~~l~~~~  634 (1406)
T KOG1146|consen  620 LVLQQNITSSLASLL  634 (1406)
T ss_pred             HHhhhcchhhccccc
Confidence            444444444333333

>KOG2231|consensus

Probab=96.44  E-value=0.018  Score=56.26  Aligned_cols=118  Identities=25%  Similarity=0.499  Sum_probs=77.1

Q ss_pred             eeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccc---------cccCChHH
Q psy2876         117 FHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCH---------LTFTTDND  187 (367)
Q Consensus       117 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---------~~f~~~~~  187 (367)
                      +.|.+|++.|.-...            .-.|..| -.|.+...|+.|+..-+  +.+.|.+|-         ....+...
T Consensus       100 ~~C~~C~~~~~~~~~------------~~~~~~c-~~~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Yt~~e  164 (669)
T KOG2231|consen  100 HSCHICDRRFRALYN------------KKECLHC-TEFKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLYTRAE  164 (669)
T ss_pred             hhcCccccchhhhcc------------cCCCccc-cchhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehehHHH
Confidence            578888877643211            1258888 77888889999984332  234455443         22234567


Q ss_pred             HHHHHHHHhc-c---CCcccccccccccCCHHHHHHHHHhcCCcccccc------cccccCCHHHHHHhHhhhc
Q psy2876         188 LIRHMRSHEE-Y---HTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIH------CGDTLNNAKDYASHLLIIH  251 (367)
Q Consensus       188 L~~H~~~h~~-~---~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~C~~------C~~~f~~~~~l~~H~~~~H  251 (367)
                      |..|+..-.. +   +..-.|..|...|.....|..|++..|.  .|-.      ++.-|.....|..|.+..|
T Consensus       165 l~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~--~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  165 LNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHE--FCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhcccee--heeecCcccccchhcccchHHHHHhhhcC
Confidence            7888765322 1   0124688899999999999999886654  3444      4566788888999986666

>smart00355 ZnF_C2H2 zinc finger

Probab=96.43  E-value=0.0031  Score=33.48  Aligned_cols=23  Identities=35%  Similarity=0.688  Sum_probs=13.8

Q ss_pred             ccCCccccccCChHHHHHHHHHH
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666544

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.39  E-value=0.0028  Score=33.28  Aligned_cols=23  Identities=26%  Similarity=0.714  Sum_probs=10.1

Q ss_pred             ccCCccccccCChHHHHHHHHHHh
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMRSHE  196 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~~h~  196 (367)
                      |+|+.|++... ...|..|++.++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555444 445555554443

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.38  E-value=0.0024  Score=33.55  Aligned_cols=22  Identities=27%  Similarity=0.733  Sum_probs=10.0

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      |+|+.|+.... ...|.+|++.+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            44555555554 44555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.27  E-value=0.0022  Score=34.04  Aligned_cols=21  Identities=29%  Similarity=0.749  Sum_probs=11.1

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy2876           6 YKCLYCHKVFKKSTSFDKHME   26 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~   26 (367)
                      |.|++|++.|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.21  E-value=0.0069  Score=37.55  Aligned_cols=30  Identities=20%  Similarity=0.387  Sum_probs=13.3

Q ss_pred             CcceeccccccccCCHHHHHHHHHHhCCCC
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKHLILHETSE  171 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  171 (367)
                      +.|-.|++|+..+....+|++|+...++.+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            344555555555555555555555544443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.19  E-value=0.0044  Score=54.54  Aligned_cols=126  Identities=23%  Similarity=0.389  Sum_probs=69.3

Q ss_pred             cccccc--cccccCCHHHHHHHHHhcCCCCceeccccc---cccc------CHHHHHHHHHHhc-----Ccccccccccc
Q psy2876          33 LHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKSCG---RRFE------SEELLIVHQVIHE-----RKFHKCTQCEE   96 (367)
Q Consensus        33 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~------~~~~L~~H~~~h~-----~~~~~C~~C~~   96 (367)
                      .|.|+.  |..+......|..|.+..++  .+.|.+|-   +.|.      +...|..|...-.     ..--.|..|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~--~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG--FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC--cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccc
Confidence            355664  55555556666666665443  24555552   2222      2344555544322     11225777777


Q ss_pred             ccCCHHHHHHHHHHccCCcceeCCCCCC-------ccCChhhhhhhhhccCCCcceeccc--cc----cccCCHHHHHHH
Q psy2876          97 SFKNKKHLKQHLLAHEKVKVFHCPKCPK-------LFRHESHLQNHVIVHDESEVHKCLY--CF----KVFVHKAHLDKH  163 (367)
Q Consensus        97 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~~C~~--C~----~~f~~~~~l~~H  163 (367)
                      .|-+-+.|..|++..+.    .|-+|++       -|.+..+|..|.+..+    |.|..  |.    .+|.....|..|
T Consensus       229 ~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~~h  300 (493)
T COG5236         229 YFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELLEH  300 (493)
T ss_pred             eecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHHHH
Confidence            77777777777765432    3444443       2566667777765432    44433  32    567788888888


Q ss_pred             HHHhC
Q psy2876         164 LILHE  168 (367)
Q Consensus       164 ~~~h~  168 (367)
                      +..-+
T Consensus       301 ~~~~h  305 (493)
T COG5236         301 LTRFH  305 (493)
T ss_pred             HHHHh
Confidence            76543

>KOG2482|consensus

Probab=96.12  E-value=0.022  Score=50.23  Aligned_cols=67  Identities=19%  Similarity=0.354  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHhCC-CCCccCCcccccc-CChHHHHHHHHHHhccC---------------------CcccccccccccCC
Q psy2876         157 KAHLDKHLILHET-SEMHNCDFCHLTF-TTDNDLIRHMRSHEEYH---------------------TKHTCDICGEKFIN  213 (367)
Q Consensus       157 ~~~l~~H~~~h~~-~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~---------------------~~~~C~~C~~~f~~  213 (367)
                      +..|..+++.-.+ ....+|-.|+..+ ..++....|+-..|+-.                     ..+.|-.|.+.|..
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrd  207 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRD  207 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCC
Confidence            3445555554432 2345799998766 45667778876544321                     23667777777777


Q ss_pred             HHHHHHHHHh
Q psy2876         214 DLKLKAHIKI  223 (367)
Q Consensus       214 ~~~l~~H~~~  223 (367)
                      +..|+.||+.
T Consensus       208 kntLkeHMrk  217 (423)
T KOG2482|consen  208 KNTLKEHMRK  217 (423)
T ss_pred             cHHHHHHHHh
Confidence            7777777764

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.05  E-value=0.0035  Score=33.27  Aligned_cols=21  Identities=38%  Similarity=0.869  Sum_probs=11.3

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLL   54 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~   54 (367)
                      |.|.+|+..|.+...|..|++
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCCcCCHHHHHHHHC
Confidence            345555555555555555554

>PRK04860 hypothetical protein; Provisional

Probab=95.55  E-value=0.0062  Score=48.99  Aligned_cols=36  Identities=22%  Similarity=0.611  Sum_probs=19.9

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCCCceeccccccccc
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFE   72 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   72 (367)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            35555 554   3345555555555555566655555554

>KOG2785|consensus

Probab=95.38  E-value=0.069  Score=48.13  Aligned_cols=23  Identities=22%  Similarity=0.430  Sum_probs=18.7

Q ss_pred             ceeCCCCCCccCChhhhhhhhhc
Q psy2876         116 VFHCPKCPKLFRHESHLQNHVIV  138 (367)
Q Consensus       116 ~~~C~~C~~~f~~~~~l~~H~~~  138 (367)
                      .|.|.-|...|.+...-+.|+++
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKS   25 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKS   25 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhh
Confidence            37899999999988888888764

>KOG2785|consensus

Probab=95.35  E-value=0.077  Score=47.84  Aligned_cols=72  Identities=18%  Similarity=0.292  Sum_probs=38.1

Q ss_pred             eeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccc---cccCCHHHHHHHH
Q psy2876         145 HKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICG---EKFINDLKLKAHI  221 (367)
Q Consensus       145 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~---~~f~~~~~l~~H~  221 (367)
                      -.|-.|++.+.+...-..||..+++-..-   . -.-......|..-+...-+  .-+.|-.|+   +.|.+....+.||
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIP---d-reYL~D~~GLl~YLgeKV~--~~~~CL~CN~~~~~f~sleavr~HM  240 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIP---D-REYLTDEKGLLKYLGEKVG--IGFICLFCNELGRPFSSLEAVRAHM  240 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCC---c-hHhhhchhHHHHHHHHHhc--cCceEEEeccccCcccccHHHHHHH
Confidence            45666666666666666666655542100   0 0001222333333322222  347777777   7888888888887


Q ss_pred             H
Q psy2876         222 K  222 (367)
Q Consensus       222 ~  222 (367)
                      .
T Consensus       241 ~  241 (390)
T KOG2785|consen  241 R  241 (390)
T ss_pred             h
Confidence            7

>KOG4173|consensus

Probab=95.23  E-value=0.009  Score=48.71  Aligned_cols=78  Identities=23%  Similarity=0.591  Sum_probs=52.9

Q ss_pred             CccCCc--cccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHHHHHhcCC------------cccccc--ccc
Q psy2876         172 MHNCDF--CHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN------------LFTCIH--CGD  235 (367)
Q Consensus       172 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~------------~~~C~~--C~~  235 (367)
                      .|.|.+  |...|.....+..|...-|+.    .|..|.+.|.+...|..|+...|.            .|.|-+  |+.
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~----sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN----SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc----hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            466766  777777777777777665553    688888888888888888776664            356643  666


Q ss_pred             ccCCHHHHHHhHhhhcCC
Q psy2876         236 TLNNAKDYASHLLIIHNI  253 (367)
Q Consensus       236 ~f~~~~~l~~H~~~~H~~  253 (367)
                      .|.+...-..|+...|.-
T Consensus       155 KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhhhHHHHhccC
Confidence            666666666666555543

>PRK04860 hypothetical protein; Provisional

Probab=95.05  E-value=0.01  Score=47.67  Aligned_cols=37  Identities=19%  Similarity=0.412  Sum_probs=25.0

Q ss_pred             ceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCC
Q psy2876         144 VHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTT  184 (367)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  184 (367)
                      +|.|. |+.   ....+.+|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            57776 765   45556677777777777777777766654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.93  E-value=0.0061  Score=33.06  Aligned_cols=21  Identities=38%  Similarity=0.858  Sum_probs=11.8

Q ss_pred             ccCCccccccCChHHHHHHHH
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMR  193 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~  193 (367)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445555555555555555554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=94.28  E-value=0.091  Score=46.53  Aligned_cols=19  Identities=11%  Similarity=0.104  Sum_probs=11.9

Q ss_pred             cchhHhHHHHHH--HHHHHHh
Q psy2876         257 QQVEKNLNNMYN--LLTTHIE  275 (367)
Q Consensus       257 ~~C~~C~~~~~~--~l~~H~~  275 (367)
                      -.|..|.-.|-.  .|..||.
T Consensus       335 ~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  335 SRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             cccccccccccCcchhhhhcc
Confidence            346666666665  6777764

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.89  E-value=0.041  Score=29.71  Aligned_cols=21  Identities=38%  Similarity=0.844  Sum_probs=12.2

Q ss_pred             eeCCCCCCccCChhhhhhhhh
Q psy2876         117 FHCPKCPKLFRHESHLQNHVI  137 (367)
Q Consensus       117 ~~C~~C~~~f~~~~~l~~H~~  137 (367)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            445566666666666655554

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.72  E-value=0.012  Score=56.02  Aligned_cols=61  Identities=26%  Similarity=0.524  Sum_probs=35.9

Q ss_pred             cccccccccccCCHHHHHHHHH--HhCCC--cccccc--ccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHME--HHNRN--VLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      ++.|..|...|.....|..|.+  .|.++  +++.|+  .|++.|.....+..|...|.+..++.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            4556666666666666666665  56555  566666  4666666666666666665555544443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.55  E-value=0.01  Score=56.46  Aligned_cols=143  Identities=17%  Similarity=0.235  Sum_probs=83.4

Q ss_pred             cceeccccccccCCHHHHHHHHH--HhCCC--CCccCC--ccccccCChHHHHHHHHHHhccCCcccccc--cccccCCH
Q psy2876         143 EVHKCLYCFKVFVHKAHLDKHLI--LHETS--EMHNCD--FCHLTFTTDNDLIRHMRSHEEYHTKHTCDI--CGEKFIND  214 (367)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~--C~~~f~~~  214 (367)
                      .++.|..|...|.....|..|..  .|.++  +++.|+  .|++.|.....+..|...|.+. .++.+..  +...+...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI-SPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC-CccccccccCccccccc
Confidence            35677777777777777777777  67777  777777  6777777777777777777665 4454443  33322222


Q ss_pred             HHHHHHHH-----hcCC--cccccc--cccccCCHHHHHHhHhhhcCCCC--CcchhHhHHHHHH--HHHHHHhhhcCCC
Q psy2876         215 LKLKAHIK-----IIHN--LFTCIH--CGDTLNNAKDYASHLLIIHNIES--SQQVEKNLNNMYN--LLTTHIEYHHSQN  281 (367)
Q Consensus       215 ~~l~~H~~-----~~H~--~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~--~~~C~~C~~~~~~--~l~~H~~~h~~~~  281 (367)
                      ..-..+..     ..+.  .+.+..  |...+.....+..|. ..|....  .+.+..|...+..  .+..|++.|....
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHI-ITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHA  445 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhcccccccccc-ccccccCCcCCCCCcchhhccCcccccccccccccCC
Confidence            21100000     0111  333332  555666666666666 5554444  4556677777666  6666677766666


Q ss_pred             CCCCCc
Q psy2876         282 NIESES  287 (367)
Q Consensus       282 ~~~c~~  287 (367)
                      ++-+..
T Consensus       446 ~~~~~~  451 (467)
T COG5048         446 PLLCSI  451 (467)
T ss_pred             ceeecc
Confidence            554443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.26  E-value=0.085  Score=27.93  Aligned_cols=19  Identities=26%  Similarity=0.704  Sum_probs=10.8

Q ss_pred             cccccccccCCHHHHHHHHH
Q psy2876           7 KCLYCHKVFKKSTSFDKHME   26 (367)
Q Consensus         7 ~C~~C~~~f~~~~~l~~H~~   26 (367)
                      .|+.||+.| ....|.+|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 3455555554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.36  E-value=0.16  Score=26.88  Aligned_cols=8  Identities=38%  Similarity=1.115  Sum_probs=3.1

Q ss_pred             CCcccccc
Q psy2876         175 CDFCHLTF  182 (367)
Q Consensus       175 C~~C~~~f  182 (367)
                      |+.|++.|
T Consensus         5 C~~CgR~F   12 (25)
T PF13913_consen    5 CPICGRKF   12 (25)
T ss_pred             CCCCCCEE
Confidence            33333333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.28  E-value=0.097  Score=30.12  Aligned_cols=22  Identities=23%  Similarity=0.619  Sum_probs=13.8

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHME   26 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~   26 (367)
                      +|.|++|+..|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4566666666666666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.82  E-value=0.13  Score=29.60  Aligned_cols=23  Identities=26%  Similarity=0.671  Sum_probs=16.0

Q ss_pred             CccCCccccccCChHHHHHHHHH
Q psy2876         172 MHNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       172 ~~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      +|.|.+|+..|.+...+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46677777777777777777654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=90.44  E-value=0.12  Score=29.41  Aligned_cols=24  Identities=21%  Similarity=0.659  Sum_probs=14.0

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCcccccccccc
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTK   41 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   41 (367)
                      |+|..||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56667766664421            4566666654

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>TIGR00622 ssl1 transcription factor ssl1

Probab=90.39  E-value=0.38  Score=35.85  Aligned_cols=23  Identities=22%  Similarity=0.486  Sum_probs=12.9

Q ss_pred             CcccccccccccCCHHHHHHHHH
Q psy2876         200 TKHTCDICGEKFINDLKLKAHIK  222 (367)
Q Consensus       200 ~~~~C~~C~~~f~~~~~l~~H~~  222 (367)
                      ..|.|+.|...|-..=++-.|..
T Consensus        80 ~~y~C~~C~~~FC~dCD~fiHe~  102 (112)
T TIGR00622        80 HRYVCAVCKNVFCVDCDVFVHES  102 (112)
T ss_pred             cceeCCCCCCccccccchhhhhh
Confidence            34666666666655555555544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=89.83  E-value=0.075  Score=44.50  Aligned_cols=47  Identities=28%  Similarity=0.662  Sum_probs=31.5

Q ss_pred             CCccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHHHHHhcCC
Q psy2876         175 CDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHN  226 (367)
Q Consensus       175 C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  226 (367)
                      |-.|++.|.....|..|++.     +-|+|.+|-+...+-..|..|-..+|+
T Consensus        13 cwycnrefddekiliqhqka-----khfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceeehhhhhh
Confidence            66777777777777777654     457777777766666666666544554

>KOG4173|consensus

Probab=89.56  E-value=0.24  Score=40.65  Aligned_cols=73  Identities=25%  Similarity=0.587  Sum_probs=34.6

Q ss_pred             ccccc--cccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc-----------Cccccc--ccccccc
Q psy2876          34 HKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE-----------RKFHKC--TQCEESF   98 (367)
Q Consensus        34 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-----------~~~~~C--~~C~~~f   98 (367)
                      |.|++  |-..|.+...+..|...-++   -.|.+|.+.|.+...|..|....+           ...|.|  +.|+..|
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KF  156 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKF  156 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhh
Confidence            44444  44455544444444433222   235555555555555555543221           233555  3366666


Q ss_pred             CCHHHHHHHHH
Q psy2876          99 KNKKHLKQHLL  109 (367)
Q Consensus        99 ~~~~~l~~H~~  109 (367)
                      .+...-..|+-
T Consensus       157 kT~r~RkdH~I  167 (253)
T KOG4173|consen  157 KTSRDRKDHMI  167 (253)
T ss_pred             hhhhhhhhHHH
Confidence            66666666654

>KOG2893|consensus

Probab=89.38  E-value=0.08  Score=44.35  Aligned_cols=44  Identities=18%  Similarity=0.347  Sum_probs=27.9

Q ss_pred             cccccccccCCHHHHHHhHhhhcCCCCCcchhHhHHHHHH--HHHHH-Hhhh
Q psy2876         229 TCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNMYN--LLTTH-IEYH  277 (367)
Q Consensus       229 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~~~--~l~~H-~~~h  277 (367)
                      -|.+|++.|.+..-|.+|+...|     |+|.+|-+..-+  .|..| |.+|
T Consensus        12 wcwycnrefddekiliqhqkakh-----fkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH-----FKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc-----ceeeeehhhhccCCCceeehhhhh
Confidence            36677777777777777764444     677777666554  66666 3444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=88.99  E-value=0.85  Score=34.23  Aligned_cols=21  Identities=24%  Similarity=0.575  Sum_probs=12.1

Q ss_pred             ceeCCCCCCccCChhhhhhhhh
Q psy2876         116 VFHCPKCPKLFRHESHLQNHVI  137 (367)
Q Consensus       116 ~~~C~~C~~~f~~~~~l~~H~~  137 (367)
                      ...|..|+..... +++..|++
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~   31 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLR   31 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHH
Confidence            3456666665544 55666665

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=87.74  E-value=0.94  Score=33.99  Aligned_cols=25  Identities=28%  Similarity=0.486  Sum_probs=17.6

Q ss_pred             cccc----cccccccCCHHHHHHhHhhhc
Q psy2876         227 LFTC----IHCGDTLNNAKDYASHLLIIH  251 (367)
Q Consensus       227 ~~~C----~~C~~~f~~~~~l~~H~~~~H  251 (367)
                      -|.|    ..|++.+.+...|.+|++..|
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            3677    777777777777777775554

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=87.42  E-value=0.54  Score=35.09  Aligned_cols=22  Identities=14%  Similarity=-0.049  Sum_probs=12.3

Q ss_pred             CcchhHhHHHHHH--HHHHHHhhh
Q psy2876         256 SQQVEKNLNNMYN--LLTTHIEYH  277 (367)
Q Consensus       256 ~~~C~~C~~~~~~--~l~~H~~~h  277 (367)
                      .|.|+.|...|-.  +.-.|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            4556666665554  555555544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=85.80  E-value=0.36  Score=30.53  Aligned_cols=26  Identities=31%  Similarity=0.685  Sum_probs=19.7

Q ss_pred             cccccccccccCCHHHHHHhHhhhcC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      .+.|+.|+..|....+..+|+...|.
T Consensus        17 ~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          17 FLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             eeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            46788888888888888888866663

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.63  E-value=0.51  Score=29.88  Aligned_cols=26  Identities=19%  Similarity=0.433  Sum_probs=16.6

Q ss_pred             CCccccccccccccCCHHHHHHHHHh
Q psy2876          30 RNVLHKCHLCTKAYPSEKNLDRHLLT   55 (367)
Q Consensus        30 ~~~~~~C~~C~~~f~~~~~l~~H~~~   55 (367)
                      |+..++||-|+..|....+..+|...
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhH
Confidence            45556666666666666666666644

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=83.30  E-value=0.71  Score=26.47  Aligned_cols=13  Identities=15%  Similarity=0.600  Sum_probs=7.8

Q ss_pred             cccccccccccCC
Q psy2876           5 LYKCLYCHKVFKK   17 (367)
Q Consensus         5 ~~~C~~C~~~f~~   17 (367)
                      .|+|..||..+..
T Consensus         2 ~~~C~~CG~i~~g   14 (34)
T cd00729           2 VWVCPVCGYIHEG   14 (34)
T ss_pred             eEECCCCCCEeEC
Confidence            3566666666543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2186|consensus

Probab=83.19  E-value=0.76  Score=39.20  Aligned_cols=47  Identities=23%  Similarity=0.530  Sum_probs=32.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHH
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLL   54 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   54 (367)
                      .|.|..||.+... ..+.+||...++ .-|.|-.|+..|.. .+...|..
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~k   49 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTK   49 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhh
Confidence            4677788777764 456667777776 56777777777766 55666653

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=82.76  E-value=0.16  Score=43.22  Aligned_cols=41  Identities=29%  Similarity=0.704  Sum_probs=23.7

Q ss_pred             CcccccccccccCCHHHHHHHHHhcCC-----------------cccccccccccCCH
Q psy2876         200 TKHTCDICGEKFINDLKLKAHIKIIHN-----------------LFTCIHCGDTLNNA  240 (367)
Q Consensus       200 ~~~~C~~C~~~f~~~~~l~~H~~~~H~-----------------~~~C~~C~~~f~~~  240 (367)
                      +.+.||+|+..|..+.......+....                 +..|+.||++|...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            445666666666655444333332111                 35899999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	367
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-20
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-17
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		4e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-09
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		7e-08
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		8e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-04
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		7e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-04
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-04
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-04
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-04
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-04
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		6e-04
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		6e-04
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		7e-04
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 75/163 (46%), Gaps = 1/163 (0%)
Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y C  C K F +S    +H   H     +KC  C K++  +K+L RH  TH   + ++C 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81
Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK 124
            CG+ F     L  HQ  H   K + C +C +SF    HL+ H   H   K + CP+C K
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141
Query: 125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILH 167
            F  E +L  H   H   + +KC  C K F  +  L+ H   H
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 60  RSFRCKSCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFH 118
           + + C  CG+ F   + L  HQ  H   K +KC +C +SF +KK L +H   H   K + 
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYK 79
Query: 119 CPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC 178
           CP+C K F   ++L+ H   H   + + C  C K F   AHL  H   H   + + C  C
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139
Query: 179 HLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKI 223
             +F+ +++L  H R+H      + C  CG+ F     L  H + 
Sbjct: 140 GKSFSREDNLHTHQRTHTG-EKPYKCPECGKSFSRRDALNVHQRT 183

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 115 KVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHN 174
           K + CP+C K F   S+LQ H   H   + +KC  C K F   + L KH   H   + + 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 175 CDFCHLTFTTDNDLIRHMRSHE 196
           C  C  +F+  + L RH R+H+
Sbjct: 63  CPECGKSFSRSDHLSRHQRTHQ 84

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 117 FHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD 176
           F C  C K F+  S L  H+++H ++  + C YC K F  K+ + KH  +H   + H C 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 177 FCHLTFTTDNDLIRHMRSH 195
            C   F+  ++LI H R H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 1   MEKTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV 58
           ME     C +  C K+F+ +++  KH+  H   V H C  C KA+     L RH L H  
Sbjct: 1   MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRV-HVCAECGKAFVESSKLKRHQLVHTG 59
Query: 59  RRSFRC--KSCGRRFESEELLIVHQVIHER-KFHKCT--QCEESFKNKKHLKQHLLAHEK 113
            + F+C  + CG+RF  +  L  H  IH   + + C    C + F    +LK H+L H K
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119
Query: 114 VK 115
            K
Sbjct: 120 AK 121

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 115 KVFHCP--KCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM 172
           +   CP   C K+FR  S ++ H+  H    VH C  C K FV  + L +H ++H   + 
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 173 HNCDF--CHLTFTTDNDLIRHMRSHEEYHTKHTC--DICGEKFINDLKLKAHI 221
             C F  C   F+ D +L  H+R H      + C  D C +KF     LK+HI
Sbjct: 63  FQCTFEGCGKRFSLDFNLRTHVRIHTG-DRPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 91  CTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPK-LFRHESHLQNHV--IVHDESEVHKC 147
           C  C + F +K +LK H   H   K F CPKC K  FR E+ L++     ++   +V  C
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 148 LYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHM 192
             C + F  +  L  H++ H     + C  C   F    DL  HM
Sbjct: 70  SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM 114

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 54  LTHNVRRSFRCKSCGRRFESEELLIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHE 112
           L    ++ F CK CGR F     L++H+  H + + + C  C ++F+ + HL+ H   H 
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHS 69
Query: 113 KVKVFHCPKCPKLFRHESHLQNHVIVHDES 142
           K K F C +C K F     L  H  +H ++
Sbjct: 70  KEKPFKCQECGKGFCQSRTLAVHKTLHMQT 99

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 11 CHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRR 70
          C + F + T+ D H+  H      +C +C + +  + +L+ H+ TH   + F C  CGR+
Sbjct: 12 CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 71 FESEELLIVHQVIHERK 87
          F +      H  IH R+
Sbjct: 72 FATLHTRTRHTKIHLRQ 88

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 115 KVFHCP--KCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM 172
           + + CP   C + F  +++L  H+ +H   +  +C  C + F  +A L+ H+  H   + 
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKP 62
Query: 173 HNCDFCHLTFTTDNDLIRHMRSH 195
             CD C   F T +   RH + H
Sbjct: 63  FACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F  K +LD H+ +H   +   C  C   F+    L  H+R+H        CDICG 
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF        H KI
Sbjct: 71  KFATLHTRTRHTKI 84

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 112 EKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILH 167
           EK ++ +C  P C K++   SHL+ H+  H   + +KC +  C   F     L +H   H
Sbjct: 11  EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70
Query: 168 ETSEMHNCDFCHLTFTTDNDLIRHMRSHE 196
             ++   C  C+ +F+  + L  HM+ H+
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 147 CLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTK-HTCD 205
           C  C K+F    HL++H + H   + ++C  C L F   + +  H+RSH+    K + C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 206 ICGEKFINDLKLKAHIKIIHN 226
            CG+ F     L  HIK +H+
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHS 90

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 11 CHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRR 70
          C + F + T+ D H+  H      +C +C + +     L++H+ TH   + F C  CGR+
Sbjct: 12 CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 71 FESEELLIVHQVIHERK 87
          F +      H  IH R+
Sbjct: 72 FATLHTRDRHTKIHLRQ 88

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F   A L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F   A L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F     L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F   ++L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 33/79 (41%)
Query: 89  HKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCL 148
           HKC  C + F  K  LK H+  H  VK + C  C       S L  H+ +H +    KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 149 YCFKVFVHKAHLDKHLILH 167
            C     + + L  HL  H
Sbjct: 69  ICPYASRNSSQLTVHLRSH 87

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F     L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F     L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 69
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 70  KFARSDERKRHTKI 83

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 87  KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHK 146
           K + C QC +SF +K    +H+  H  ++ + C  C K F+ + HL  H+ +H   + ++
Sbjct: 9   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67
Query: 147 CLYCFKVFVHKAHLDKHL 164
           C  C K F+ +    +H+
Sbjct: 68  CNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C K F HK+  D+H+ +H     + C  C   F   + L+ HM+ H      + C+IC +
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI-KPYECNICAK 73
Query: 210 KFI 212
           +F+
Sbjct: 74  RFM 76

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGE 209
           C + F     L +H+ +H   +   C  C   F+  + L  H+R+H        CDICG 
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-EKPFACDICGR 70
Query: 210 KFINDLKLKAHIKI 223
           KF    + K H KI
Sbjct: 71  KFARSDERKRHTKI 84

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 137 IVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHE 196
           ++ D    + C+ C + +V    L +H  +H   + + C +C   F     L  +   HE
Sbjct: 15  LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFP----LAEYRTKHE 70
Query: 197 EYHT---KHTCDICGEKFINDLKLKAHIKIIHN 226
            +HT   ++ C  CG+ FIN   + +HIK +H+
Sbjct: 71  IHHTGERRYQCLACGKSFINYQFMSSHIKSVHS 103

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	367
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-19
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-13
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-06
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-09
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	5e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 86.0 bits (214), Expect = 5e-20
 Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 5/184 (2%)

Query: 15  FKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESE 74
              S+S             + C  C K++    +L  H  TH   + ++C  CG+ F  +
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 75  ELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHL 132
           + L  HQ  H  E K +KC +C +SF  + +L+ H   H   K + CP+C K F   +HL
Sbjct: 63  KDLTRHQRTHTGE-KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121

Query: 133 QNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDFCHLTFTTDNDLIRH 191
           + H   H   + +KC  C K F  + +L  H   H T E  + C  C  +F+  + L  H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH-TGEKPYKCPECGKSFSRRDALNVH 180

Query: 192 MRSH 195
            R+H
Sbjct: 181 QRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 83.3 bits (207), Expect = 4e-19
 Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 3/164 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           Y C  C K F +S    +H   H     +KC  C K++  +K+L RH  TH   + ++C 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 66  SCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCP 123
            CG+ F     L  HQ  H  E K + C +C +SF    HL+ H   H   K + CP+C 
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGE-KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 124 KLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILH 167
           K F  E +L  H   H   + +KC  C K F  +  L+ H   H
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 69.4 bits (171), Expect = 4e-14
 Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 16/167 (9%)

Query: 77  LIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQN 134
            +    +   E K + C +C +SF    HL +H   H   K + CP+C K F  +  L  
Sbjct: 9   SVAQAALEPGE-KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR 67

Query: 135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDFCHLTFTTDNDLIRHMR 193
           H   H   + +KC  C K F  +A+L  H   H T E  + C  C  +F+    L  H R
Sbjct: 68  HQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH-TGEKPYACPECGKSFSQLAHLRAHQR 126

Query: 194 SHEEYHTK---HTCDICGEKFINDLKLKAHIKIIHNL---FTCIHCG 234
           +    HT    + C  CG+ F  +  L  H +  H     + C  CG
Sbjct: 127 T----HTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECG 168

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 62  FRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQH---LLAHEKVKV 116
             C +C ++F S+  L VH   H  E K  +C +C + +  K++L +H      +   +V
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGE-KPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66

Query: 117 FHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKH 163
           F C  C + FR    L+ H++ H     +KC  C + F+ K  L  H
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.8 bits (151), Expect = 5e-12
 Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 6/107 (5%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRH---LLTHNVRRSF 62
            +C  CHK F        H   H      +C  C K Y  ++NL  H      +   + F
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 63  RCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQH 107
            C  C   F     L +H V H  E   +KC+ C + F  KK L+ H
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGE-MPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 16/125 (12%)

Query: 110 AHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHET 169
                    CP C K F  + +L+ H   H   +  +C  C K +  K +L +H      
Sbjct: 1   GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH---EAR 57

Query: 170 SEMH------NCDFCHLTFTTDNDLIRHMRSHEEYHTK---HTCDICGEKFINDLKLKAH 220
           + M+       C  C  TF    +L  HM S    HT    + C  C ++F+    L++H
Sbjct: 58  NCMNRSEQVFTCSVCQETFRRRMELRLHMVS----HTGEMPYKCSSCSQQFMQKKDLQSH 113

Query: 221 IKIIH 225
           +  +H
Sbjct: 114 MIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 40.6 bits (96), Expect = 9e-05
 Identities = 16/86 (18%), Positives = 39/86 (45%), Gaps = 10/86 (11%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLH------KCHLCTKAYPSEKNLDRHLLTHNVR 59
           ++C  C K + +  +  +H   +    ++       C +C + +     L  H+++H   
Sbjct: 36  FECPKCGKCYFRKENLLEHEARNC---MNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92

Query: 60  RSFRCKSCGRRFESEELLIVHQV-IH 84
             ++C SC ++F  ++ L  H + +H
Sbjct: 93  MPYKCSSCSQQFMQKKDLQSHMIKLH 118

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.8 bits (164), Expect = 3e-13
 Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 39  CTKAYPSEKNLDRHLLTHNVRRSFRCK--SCGRRFESEELLIVHQVIH--ERKFHKCTQ- 93
           C  AY     L  HL  H   + F CK   C + F S   L  H + H  E K   C   
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE-KNFTCDSD 78

Query: 94  -CEESFKNKKHLKQHLLAH--EKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEVHKC- 147
            C+  F  K ++K+H       K+ V+ C    C K F+  + L+ H   H +   ++C 
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138

Query: 148 -LYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHM-RSHEE 197
              C K F   + L +H  +H        D C     T    ++H+   H++
Sbjct: 139 HEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 13/171 (7%)

Query: 6   YKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRS 61
           Y C +  C   + K+     H+  H       C    C K + S  +L RH LTH   ++
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 62  FRCK--SCGRRFESEELLIVHQVIH--ERKF-HKCT--QCEESFKNKKHLKQHLLAHEKV 114
           F C    C  RF ++  +  H       +   + C    C ++FK    LK H  +H + 
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 115 KVFHC--PKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKH 163
             + C    C K F   S L+ H  VH      K   C  V        KH
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 14/143 (9%)

Query: 39  CTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH----------ERKF 88
              +    K           + S   KSC R F +   L+ H  +              +
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 89  HKCTQCEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEVHK 146
            +C +  +SFK K  L  H+  H   K F C  P C K+F    +L+ H   H   +  K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 147 CLY--CFKVFVHKAHLDKHLILH 167
           C +  C + F + +   KH+ +H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 4e-12
 Identities = 34/145 (23%), Positives = 52/145 (35%), Gaps = 16/145 (11%)

Query: 66  SCGRRFESEELLIVHQVIHER-KFHKCTQCEESFKNKKHLKQHLLAH---------EKVK 115
           S G   +  +  +  + I E         C+ +F     L  H+                
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 116 VFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILHETSEM- 172
              CP+  K F+ +  L NH+ VH   +   C +  C K+F    +L  H   H T E  
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH-TGEKP 120

Query: 173 HNCDF--CHLTFTTDNDLIRHMRSH 195
             C+F  C   F   +D  +HM  H
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.1 bits (141), Expect = 2e-10
 Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 19/145 (13%)

Query: 13  KVFKKSTSFDKHMEH---HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFR------ 63
                     + +         +      C + + +   L  H+   +V    +      
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 64  ---CKSCGRRFESEELLIVHQVIH--ERKFHKCT--QCEESFKNKKHLKQHLLAHEKVKV 116
              C   G+ F+++  L+ H  +H  E K   C    C + F   ++LK H   H   K 
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGE-KPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120

Query: 117 FHC--PKCPKLFRHESHLQNHVIVH 139
           F C    C + F + S  + H+ VH
Sbjct: 121 FKCEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.1 bits (123), Expect = 4e-08
 Identities = 32/147 (21%), Positives = 44/147 (29%), Gaps = 22/147 (14%)

Query: 94  CEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH---------DESEV 144
              S +  K         E         C + F     L  HV +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 145 HKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDF--CHLTFTTDNDLIRHMRSHEEYHTK 201
            +C    K F  K  L  H+ +H T E    C F  C   F    +L  H R+    HT 
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVH-TGEKPFPCPFPGCGKIFARSENLKIHKRT----HTG 117

Query: 202 ---HTCDI--CGEKFINDLKLKAHIKI 223
                C+   C  +F N    K H+ +
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 16/129 (12%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHH---------NRNVLHKCHLCTKAYPSEKNLDRHLLTH 56
                C + F        H+            +     +C    K++ ++  L  H+  H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 57  NVRRSFRCKS--CGRRFESEELLIVHQVIH--ERKFHKCT--QCEESFKNKKHLKQHLLA 110
              + F C    CG+ F   E L +H+  H  E+ F KC    C+  F N    K+H+  
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF-KCEFEGCDRRFANSSDRKKHMHV 144

Query: 111 HEKVKVFHC 119
           H   K    
Sbjct: 145 HTSDKSGPS 153

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 62  FRC--KSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHC 119
             C  K C + F     +  H   H  + H C +C ++F     LK+H L H   K F C
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 120 PK--CPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILH 167
               C K F  + +L+ HV +H     + C +  C K F    +L  H++ H
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 53.7 bits (130), Expect = 3e-09
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 10/119 (8%)

Query: 1   MEKTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV 58
           ME     C +  C K+F+ +++  KH+  H   V H C  C KA+     L RH L H  
Sbjct: 1   MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRV-HVCAECGKAFVESSKLKRHQLVHTG 59

Query: 59  RRSFRCKS--CGRRFESEELLIVHQVIH--ERKFHKC--TQCEESFKNKKHLKQHLLAH 111
            + F+C    CG+RF  +  L  H  IH  +R +  C    C + F    +LK H+L H
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY-VCPFDGCNKKFAQSTNLKSHILTH 117

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 48  NLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLK 105
                 L    ++ F CK CGR F     L++H+  H  E + + C  C ++F+ + HL+
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE-RPYTCDICHKAFRRQDHLR 62

Query: 106 QHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH 139
            H   H K K F C +C K F     L  H  +H
Sbjct: 63  DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 1/88 (1%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
           + C +C + F KS +   H   H     + C +C KA+  + +L  H   H+  + F+C+
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 66  SCGRRFESEELLIVHQVIH-ERKFHKCT 92
            CG+ F     L VH+ +H +       
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 24/94 (25%), Positives = 32/94 (34%), Gaps = 2/94 (2%)

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDK 162
                 L  +  K F C  C + F    +L  H   H +   + C  C K F  + HL  
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 163 HLILHETSEM-HNCDFCHLTFTTDNDLIRHMRSH 195
           H  +H + E    C  C   F     L  H   H
Sbjct: 64  HRYIH-SKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 55  THNVRRSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHE 112
           +       +C+ CG+ F  ++ L  H   H    K +KC  C+ +  +   L +HL  H 
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV-KPYKCKTCDYAAADSSSLNKHLRIHS 60

Query: 113 KVKVFHCPKCPKLFRHESHLQNHVIVH 139
             + F C  CP   R+ S L  H+  H
Sbjct: 61  DERPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 24/79 (30%), Positives = 34/79 (43%)

Query: 6  YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
          +KC  C K F +      HM  H     +KC  C  A     +L++HL  H+  R F+C+
Sbjct: 9  HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 66 SCGRRFESEELLIVHQVIH 84
           C     +   L VH   H
Sbjct: 69 ICPYASRNSSQLTVHLRSH 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)

Query: 87  KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEV-- 144
               C  C + F++  HL +H L+H   K + CP C   F+ +  +  HV  HD S    
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 145 HKCLYCFKVFVHKAHLDKHL 164
           + C  C K F    HL+ H+
Sbjct: 66  YICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 34  HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH---ERKFHK 90
             C +C K +    +L+RH L+H+  + + C  CG RF+ ++ +  H   H     K + 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 91  CTQCEESFKNKKHLKQHL 108
           C  C + F    HL  H+
Sbjct: 68  CQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 145 HKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDFCHLTFTTDNDLIRHMRSHE-EYHTKH 202
             C  C K+F    HL++H + H + E  ++C  C L F   + +  H+RSH+      +
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSH-SGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY 66

Query: 203 TCDICGEKFINDLKLKAHIKIIH 225
            C  CG+ F     L  HIK +H
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 110 AHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILH-- 167
                    C  C K+FR   HL  H + H   + + C  C   F  K  +  H+  H  
Sbjct: 1   GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 168 ETSEMHNCDFCHLTFTTDNDLIRHMR 193
              + + C  C   F+  + L  H++
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIK 86

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 18/151 (11%)

Query: 6   YKCLYCHKVFKKSTSFDKHMEH---HNRNVLHKCHLC-----TKAYPSEKNLDRHLLTHN 57
            +   C + F        H+     H       CH        + + ++  L  H+  H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 58  VRRSFRCKS--CGRRFESEELLIVHQVIH--ERKFHKCTQ--CEESFKNKKHLKQHLL-A 110
             +  +C    C + +   E L  H   H  E+ +  C    C ++F N     +H    
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY-MCEHEGCSKAFSNASDRAKHQNRT 122

Query: 111 HEKVKVFHC--PKCPKLFRHESHLQNHVIVH 139
           H   K + C  P C K +   S L+ HV   
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 53.4 bits (129), Expect = 7e-09
 Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 16/150 (10%)

Query: 62  FRCKSCGRRFESEELLIVH---QVIH-ERKFHKCTQCE-----ESFKNKKHLKQHLLAHE 112
            R   C + F+S+E L+ H   + IH ERK   C           FK +  L  H+  H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 113 KVKVFHCP--KCPKLFRHESHLQNHVIVHDESEVHKC--LYCFKVFVHKAHLDKHLILHE 168
             K   C    C K +    +L+ H+  H   + + C    C K F + +   KH     
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 169 TSEM-HNCDF--CHLTFTTDNDLIRHMRSH 195
           ++E  + C    C   +T  + L +H+++ 
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 47.2 bits (113), Expect = 9e-07
 Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 20/151 (13%)

Query: 90  KCTQCEESFKNKKHLKQHLLA---HEKVKVFHC-----PKCPKLFRHESHLQNHVIVHDE 141
           +   C + F +++ L  H+ +   H + K F C      +  + F+ +  L  H+  H  
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 142 SEVHKCLY--CFKVFVHKAHLDKHLILHETSEM-HNCDF--CHLTFTTDNDLIRHM-RSH 195
            + HKC +  C K +    +L  HL  H T E  + C+   C   F+  +D  +H  R+H
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSH-TGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 196 EEYHTK-HTCDI--CGEKFINDLKLKAHIKI 223
              + K + C +  C +++ +   L+ H+K 
Sbjct: 124 --SNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 27/130 (20%)

Query: 115 KVFHCPKCPKLFRHESHLQNHVI---VHDESEVHKCLYC-----FKVFVHKAHLDKHLIL 166
                  C + F  +  L +H+    +H E +   C +       + F  +  L  H+  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 167 HETSEM-HNCDF--CHLTFTTDNDLIRHMRSH--------EEYHTKHTCDICGEKFINDL 215
           H T E  H C F  C  +++   +L  H+RSH        E        + C + F N  
Sbjct: 62  H-TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH-------EGCSKAFSNAS 113

Query: 216 KLKAHIKIIH 225
               H    H
Sbjct: 114 DRAKHQNRTH 123

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 4/101 (3%)

Query: 35  KCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHER-KFHKCTQ 93
            C  C K++  +   DRH+  H   R + C  CG++F+ +  L+ H  IH   K ++C  
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 94  CEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQN 134
           C + F  +    +H+      K +   K  +     S   +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 50.1 bits (121), Expect = 3e-08
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 55  THNVRRSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHE 112
             +  + + C+ CG+ F  +     H  +H    + + C  C + FK K HL  H+  H 
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIHT 61

Query: 113 KVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHL 160
            +K + C  C K F        HV     ++ ++     +     +  
Sbjct: 62  GIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 42.4 bits (101), Expect = 2e-05
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 90  KCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLY 149
            C QC +SF +K    +H+  H  ++ + C  C K F+ + HL  H+ +H   + ++C  
Sbjct: 12  PC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 150 CFKVFVHKAHLDKH 163
           C K F+ +    +H
Sbjct: 71  CAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.2 bits (90), Expect = 6e-04
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 122 CPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDFCHL 180
           C K F H+S    H+ +H     + C  C K F  K HL  H+ +H T    + C+ C  
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH-TGIKPYECNICAK 73

Query: 181 TFTTDNDLIRHMRSHEEYHTKHTCDICGEKF 211
            F   +   RH+ S  +    +      +  
Sbjct: 74  RFMWRDSFHRHVTSCTK---SYEAAKAEQNT 101

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 61  SFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFH 118
           SF CK CG+ F+    L  H +IH   R +  C  C + F  K  +K+H   H   K   
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPY-PCQYCGKRFHQKSDMKKHTFIHTGEKPHK 59

Query: 119 CPKCPKLFRHESHLQNHVIVH 139
           C  C K F   S+L  H   H
Sbjct: 60  CQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 117 FHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM-HNC 175
           F C  C K F+  S L  H+++H ++  + C YC K F  K+ + KH  +H T E  H C
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH-TGEKPHKC 60

Query: 176 DFCHLTFTTDNDLIRHMRSH 195
             C   F+  ++LI H R H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.8 bits (102), Expect = 6e-06
 Identities = 21/79 (26%), Positives = 37/79 (46%)

Query: 6  YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK 65
          + C  C K FK+S++   H+  H+    + C  C K +  + ++ +H   H   +  +C+
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 66 SCGRRFESEELLIVHQVIH 84
           CG+ F     LI H   H
Sbjct: 62 VCGKAFSQSSNLITHSRKH 80

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 77  LIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAH--EKVKVFHCPKCPKLFRHESHL 132
                  H  E+ + +C  C   F     +K H+L    E V  FHCP C  +   +S L
Sbjct: 3   SGSSGRTHSGEKPY-ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 133 QNHV 136
             H+
Sbjct: 62  GVHL 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.4 bits (111), Expect = 4e-07
 Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 2/71 (2%)

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH--DESEVHKCLYCFKVFVHKAHL 160
                   H   K + C  C   F     ++ H++    +      C +C  V   K+ L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 161 DKHLILHETSE 171
             HL    +  
Sbjct: 62  GVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 15/69 (21%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 159 HLDKHLILHETSEM-HNCDFCHLTFTTDNDLIRHMRSH-EEYHTKHTCDICGEKFINDLK 216
                   H + E  + C  CH  FT    +  H+     E   K  C  C         
Sbjct: 2   SSGSSGRTH-SGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 217 LKAHIKIIH 225
           L  H++  H
Sbjct: 61  LGVHLRKQH 69

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 62  FRCKS--CGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVF 117
           + C    C RRF     L  H  IH  + K  +C  C  +F    HL  H+  H   K F
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63

Query: 118 HCPKCPKLFRHESHLQNHVIVH 139
            C  C + F      + H  +H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 1  MEKTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV 58
          ME+  Y C    C + F +S S  +H+  H      +C +C + +    +L  H+ TH  
Sbjct: 1  MERP-YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59

Query: 59 RRSFRCKSCGRRFESEELLIVHQVIH 84
           + F C  CGR+F   +    H  IH
Sbjct: 60 EKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.8 bits (102), Expect = 7e-06
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 115 KVFHCPK--CPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEM 172
           + + CP   C + F     L  H+ +H   +  +C  C + F    HL  H+  H T E 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH-TGEK 61

Query: 173 -HNCDFCHLTFTTDNDLIRHMRSH 195
              CD C   F   ++  RH + H
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.9 bits (128), Expect = 5e-09
 Identities = 34/114 (29%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 62  FRCK--SCGRRFESEELLIVHQVIH--ERKFHKCT--QCEESFKNKKHLKQHLLAHEKVK 115
           F C    C +R+     L +H   H  E K ++C    CE  F     LK+H   H  VK
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGE-KPYQCDFKDCERRFSRSDQLKRHQRRHTGVK 65

Query: 116 VFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILH 167
            F C  C + F    HL+ H   H   +   C +  C K F     L +H  +H
Sbjct: 66  PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 89  HKCTQ--CEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEV 144
             C    C + +    HL+ H   H   K + C    C + F     L+ H   H   + 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 145 HKCLYCFKVFVHKAHLDKHLILHETSEM-HNCDF--CHLTFTTDNDLIRHMRSH 195
            +C  C + F    HL  H   H T E   +C +  C   F   ++L+RH   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTH-TGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 9/114 (7%)

Query: 6   YKC--LYCHKVFKKSTSFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRS 61
           + C    C+K + K +    H   H     ++C    C + +     L RH   H   + 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 62  FRCKSCGRRFESEELLIVHQVIH--ERKFHKC--TQCEESFKNKKHLKQHLLAH 111
           F+CK+C R+F   + L  H   H  E K   C    C++ F     L +H   H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGE-KPFSCRWPSCQKKFARSDELVRHHNMH 119

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 18/74 (24%), Positives = 30/74 (40%)

Query: 34  HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQ 93
            +C +C + +    +L  H+ TH   + F C  CGR+F   +    H+ I         +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 94  CEESFKNKKHLKQH 107
            EE      HL+  
Sbjct: 64  VEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 17/97 (17%), Positives = 29/97 (29%), Gaps = 9/97 (9%)

Query: 114 VKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMH 173
           +K F C  C + F    HL  H+  H   +   C  C + F       +H  +       
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59

Query: 174 NCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEK 210
             D      + +  L   +    +          GE+
Sbjct: 60  LEDKVEELLSKNYHLENEVA-RLKKLV-------GER 88

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 77  LIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAH----EKVKVFHCPKCPKLFRHES 130
                  H  E K + C+ C+++F+ K+ L  H   +         F C KC K F   +
Sbjct: 3   SGSSGRTHTGE-KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 131 HLQNHVIVHDESEVHKCLYCFKVF 154
            +  H       +  +        
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 46.8 bits (112), Expect = 3e-07
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 5/84 (5%)

Query: 48  NLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH-----ERKFHKCTQCEESFKNKK 102
           +      TH   + + C  C + F  ++LL +H   +           C++C ++F  + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLF 126
            + +H                   
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 4/70 (5%)

Query: 6  YKCLYCHKVFKKSTSFDKHME-HHNRNVLHK---CHLCTKAYPSEKNLDRHLLTHNVRRS 61
          Y C +C K F++    D H + +H+ N +     C  C K +     + RH         
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 62 FRCKSCGRRF 71
             ++ G   
Sbjct: 76 VEGENSGPSS 85

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 20  SFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRC--KSCGRRFESEE 75
           S         +  +H C    CTK Y    +L  HL TH   + ++C  + C  RF   +
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD 61

Query: 76  LLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAHE 112
            L  H   H   + F +C  C  SF    HL  H+  H+
Sbjct: 62  ELTRHYRKHTGAKPF-QCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.1 bits (110), Expect = 6e-07
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 59  RRSFRCK--SCGRRFESEELLIVHQVIH--ERKFHKCT--QCEESFKNKKHLKQHLLAHE 112
           RR   C    C + +     L  H   H  E+ + KCT   C+  F     L +H   H 
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPY-KCTWEGCDWRFARSDELTRHYRKHT 71

Query: 113 KVKVFHCPKCPKLFRHESHLQNHVIVH 139
             K F C  C + F    HL  H+  H
Sbjct: 72  GAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 86  RKFHKCT--QCEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHDE 141
           R+ H C    C + +    HLK HL  H   K + C    C   F     L  H   H  
Sbjct: 13  RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72

Query: 142 SEVHKCLYCFKVFVHKAHLDKHLILHE 168
           ++  +C  C + F    HL  H+  H+
Sbjct: 73  AKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 107 HLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKC--LYCFKVFVHKAHLDKHL 164
             L   ++     P C K++   SHL+ H+  H   + +KC    C   F     L +H 
Sbjct: 8   PDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY 67

Query: 165 ILHETSEMHNCDFCHLTFTTDNDLIRHMRSHE 196
             H  ++   C  C+ +F+  + L  HM+ H+
Sbjct: 68  RKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 10 YCHKVFKKSTSFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKSC 67
           C KV+ KS+    H+  H     +KC    C   +     L RH   H   + F+C  C
Sbjct: 22 GCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVC 81

Query: 68 GRRFESEELLIVHQVIHE 85
           R F   + L +H   H+
Sbjct: 82 NRSFSRSDHLALHMKRHQ 99

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 5/88 (5%)

Query: 56  HNVRRSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCT--QCEESFKNKKHLKQHLLAH 111
                +     CG+ +     L  H   H  E+ +  C    C   F     L +H   H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPY-HCDWDGCGWKFARSDELTRHYRKH 60

Query: 112 EKVKVFHCPKCPKLFRHESHLQNHVIVH 139
              + F C KC + F    HL  H+  H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 3/87 (3%)

Query: 84  HERKF-HKCTQCEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHD 140
                      C +++    HLK HL  H   K +HC    C   F     L  H   H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 141 ESEVHKCLYCFKVFVHKAHLDKHLILH 167
                +C  C + F    HL  H+  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 28  HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK--SCGRRFESEELLIVHQVIH- 84
                      C K Y    +L  HL TH   + + C    CG +F   + L  H   H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 85  -ERKFHKCTQCEESFKNKKHLKQHLLAH 111
             R F +C +C+ +F    HL  H+  H
Sbjct: 62  GHRPF-QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.0 bits (110), Expect = 6e-07
 Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 2/87 (2%)

Query: 111 HEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKC--LYCFKVFVHKAHLDKHLILHE 168
                      C K +   SHL+ H+  H   + + C    C   F     L +H   H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 169 TSEMHNCDFCHLTFTTDNDLIRHMRSH 195
                 C  C   F+  + L  HM+ H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 6  YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFR 63
               C K + KS+    H+  H     + C    C   +     L RH   H   R F+
Sbjct: 8  CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 64 CKSCGRRFESEELLIVHQVIH 84
          C+ C R F   + L +H   H
Sbjct: 68 CQKCDRAFSRSDHLALHMKRH 88

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 4/67 (5%)

Query: 62  FRCKSCGRRFESEELLIVHQVIHER----KFHKCTQCEESFKNKKHLKQHLLAHEKVKVF 117
            +C+ CG     +  L  HQ  H          C  C + F+    +  H        + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 118 HCPKCPK 124
              +   
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 12/54 (22%), Positives = 16/54 (29%), Gaps = 3/54 (5%)

Query: 89  HKCTQCEESFKNKKHLKQHLLAH---EKVKVFHCPKCPKLFRHESHLQNHVIVH 139
            +C  C  + + K  L  H   H        F C  C K F     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 3/67 (4%)

Query: 145 HKCLYCFKVFVHKAHLDKHLILHETSEMHN---CDFCHLTFTTDNDLIRHMRSHEEYHTK 201
            +C  C      KA L+ H   H  +       C+FC   F   + +  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 202 HTCDICG 208
              +  G
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 173 HNCDFCHLTFTTDNDLIRHMRSH--EEYHTKHTCDICGEKFINDLKLKAHIKIIH 225
             C+ C  T      L  H R H       +  C+ CG++F     + AH    H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.9 bits (96), Expect = 3e-05
 Identities = 12/62 (19%), Positives = 19/62 (30%), Gaps = 3/62 (4%)

Query: 117 FHCPKCPKLFRHESHLQNHVIVHDESEVHK---CLYCFKVFVHKAHLDKHLILHETSEMH 173
             C  C    R ++ L  H   H E+       C +C K F     +  H      + + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 174 NC 175
             
Sbjct: 68  AP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 5e-05
 Identities = 10/70 (14%), Positives = 19/70 (27%), Gaps = 3/70 (4%)

Query: 6  YKCLYCHKVFKKSTSFDKHMEHHNRNVLHK---CHLCTKAYPSEKNLDRHLLTHNVRRSF 62
           +C  C    ++  S + H   H   V      C  C K +    ++  H    +     
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 63 RCKSCGRRFE 72
            +       
Sbjct: 68 APQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 34 HKCHLCTKAYPSEKNLDRHLLTHNVR---RSFRCKSCGRRFESEELLIVHQVIH 84
           +C +C      + +L+ H   H        F C+ CG+RFE  + +  H+   
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 2e-07
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 6/99 (6%)

Query: 45  SEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEE------SF 98
           S  +   +         FRCK C   +++   L VH            + +       S 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 99  KNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVI 137
             K+ L +     +  KV  C  C   F     L  H+I
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.4 bits (104), Expect = 4e-06
 Identities = 18/101 (17%), Positives = 29/101 (28%), Gaps = 5/101 (4%)

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIV-----HDESEVHKCLYCFKVFVHK 157
             K +         F C  C   +     L  H+        D  E             K
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 158 AHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY 198
             L +     +  ++  C +C  +F +  DL  HM   + Y
Sbjct: 66  RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHY 106

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.4 bits (104), Expect = 5e-06
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 5/80 (6%)

Query: 6  YKCLYCHKVFKKSTSFDKHME--HHNRNVLHKCHLCTKAY---PSEKNLDRHLLTHNVRR 60
          ++C  C   +        HM    H R+  H+           P +++L       + ++
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 61 SFRCKSCGRRFESEELLIVH 80
            +C  CG  FES + L VH
Sbjct: 80 VLKCMYCGHSFESLQDLSVH 99

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 45.6 bits (109), Expect = 4e-07
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 89  HKCTQCEESFKNKKHLKQHL--LAHEKVKVFHCPKCPKLFRHESHLQNHVIVH 139
           ++C  C   + +  +  +H        VKV+ CP C K F  + ++  HV + 
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.9 bits (102), Expect = 5e-06
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 111 HEKVKVFHCPKCPKLFRHESHLQNH--VIVHDESEVHKCLYCFKVFVHKAHLDKHLILH 167
            E    + C  C +++ H S+   H         +V+ C +CFK F  K ++  H+ + 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 42.2 bits (100), Expect = 7e-06
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 55  THNVRRSFRCKSCGRRFESEELLIVHQVIH---ERKFHKCTQCEESFKNKKHLKQHLLAH 111
           T     ++RCK C R +        H V       K + C  C + F  K ++  H+   
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

Query: 112 EKV 114
            K+
Sbjct: 64  HKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 145 HKCLYCFKVFVHKAHLDKHLILHETSE--MHNCDFCHLTFTTDNDLIRHMRSH 195
           ++C  C +V+ H ++  +H +        ++ C FC   FT  +++  H++  
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 6  YKCLYCHKVFKKSTSFDKHM--EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHN 57
          Y+C  C +V+   ++F +H    H     ++ C  C K +  + N+  H+   +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 5e-07
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 77  LIVHQVIH-ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNH 135
               +    ER+ +KC +C +SF +   L +H   H   K + C +C K F   SHL  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 136 VIVH 139
             VH
Sbjct: 66  HRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 5e-04
 Identities = 18/65 (27%), Positives = 29/65 (44%)

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDK 162
              +      + + + C +C K F H S L  H   H   + +KC  C K F+ ++HL  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 163 HLILH 167
           H  +H
Sbjct: 65  HHRVH 69

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.8 bits (110), Expect = 6e-07
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 33  LHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCT 92
           +++C LC     S      H      R +  C  C  RF S EL   H+   E K   C 
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCL 73

Query: 93  QCEESFKNKKHLKQH 107
           +C  +FK+   + +H
Sbjct: 74  ECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 59  RRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFH 118
           +  ++C+ C  +  S      H+ +       C  C   F + +  ++H  +  + K   
Sbjct: 14  KEVYQCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHE-SKCEYKKLT 71

Query: 119 CPKCPKLFRHESHLQNHVI-VHDE 141
           C +C + F+    +  H + VH++
Sbjct: 72  CLECMRTFKSSFSIWRHQVEVHNQ 95

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 3/84 (3%)

Query: 80  HQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH 139
              +  ++ ++C  C     +      H        V  CP C   F      Q H    
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHESKC 65

Query: 140 DESEVHKCLYCFKVFVHKAHLDKH 163
           +  ++  CL C + F     + +H
Sbjct: 66  EYKKL-TCLECMRTFKSSFSIWRH 88

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.4 bits (106), Expect = 1e-06
 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 77  LIVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNH 135
                 IH   K + C +C ++F     L QH   H   K + C +C K F   S L NH
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 136 VIVH 139
             +H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.1 bits (95), Expect = 5e-05
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 49  LDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHER-KFHKCTQCEESFKNKKHLKQH 107
                  H+  + + C  CG+ F    +L+ HQ +H   K +KC +C ++F     L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 36.7 bits (86), Expect = 8e-04
 Identities = 20/64 (31%), Positives = 26/64 (40%)

Query: 104 LKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKH 163
                  H   K + C +C K F   S L  H  VH   + +KCL C K F   + L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 164 LILH 167
             +H
Sbjct: 62  QRIH 65

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.4 bits (103), Expect = 4e-06
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 4/79 (5%)

Query: 89  HKCT--QCEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEV 144
           + C    C ++FK    LK H  +H +   + C    C K F   S L+ H  VH     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 145 HKCLYCFKVFVHKAHLDKH 163
            K   C  V        KH
Sbjct: 62  KKDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 41.1 bits (97), Expect = 3e-05
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 64  CKSCGRRFESEELLIVHQVIH--ERKFHKCTQ--CEESFKNKKHLKQHLLAHEKVKVFHC 119
            ++CG+ F+    L VHQ  H  +  + +C    C++ F     LK+H   H        
Sbjct: 6   FENCGKAFKKHNQLKVHQFSHTQQLPY-ECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 120 PKCPKLFRHESHLQNHV 136
             C  + +  +    HV
Sbjct: 65  DSCSFVGKTWTLYLKHV 81

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.5 bits (104), Expect = 5e-06
 Identities = 17/102 (16%), Positives = 28/102 (27%), Gaps = 2/102 (1%)

Query: 7   KCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS 66
                 +  K+        +   R ++    +       E +    LL       F C  
Sbjct: 21  FIHVTLEELKRYHQLTPEQKRLIRAIVKTL-IHNPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 67  CGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHL 108
           C   F S   L  H    E     C  C++ F +      H+
Sbjct: 80  CLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHV 120

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 7/120 (5%)

Query: 22  DKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC-----KSCGRRFESEEL 76
           +  ++  ++  L            E+    H LT   +R  R          +  +    
Sbjct: 3   ESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSY 62

Query: 77  LIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHV 136
           L             C  C   F +   LKQH+   E  KV  CP C K F       +HV
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHV 120

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.1 bits (95), Expect = 8e-05
 Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 65  KSCGRRFESEELLIVHQVIHERKFH-----KCTQCEESFKNKKHLKQHLLAHEKVKVFHC 119
           K        EEL   HQ+  E+K       K         ++      LLA + +  F C
Sbjct: 18  KGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVC 77

Query: 120 PKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHL 164
           P C   F     L+ H+   + ++V  C  C K F        H+
Sbjct: 78  PLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHV 120

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 6e-06
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 89  HKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNH 135
             C  C  +F  ++HLK+H  +H   K + C  C + F     L  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.4 bits (93), Expect = 7e-05
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%)

Query: 60  RSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQH 107
           RSF C+ C R F  +E L  H   H  E+ +  C  C  +F  +  L +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPY-PCGLCNRAFTRRDLLIRH 49

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 14/51 (27%), Positives = 22/51 (43%)

Query: 89  HKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH 139
            KC++C  S  +K  L+ H   H   + F C  C    +  S+L  H+   
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 62  FRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLKQHLLAH 111
            +C  C     S+  L +H+ IH  +R F KC  C    K   +L +H+   
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPF-KCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 115 KVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILH 167
               C +C      ++ L+ H  +H      KC YC       ++L KH+   
Sbjct: 8   HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 18/65 (27%), Positives = 29/65 (44%)

Query: 103 HLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDK 162
           H   H       K + C +C   FR++ +L +H  VH   + ++C  C   F   A+L  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 163 HLILH 167
           H  +H
Sbjct: 64  HTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.7 bits (94), Expect = 7e-05
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 48  NLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH--ERKFHKCTQCEESFKNKKHLK 105
           +   H    +  + ++C  C   F  +  L  H+ +H  E K ++C  C   F    +LK
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE-KPYRCNICGAQFNRPANLK 62

Query: 106 QH 107
            H
Sbjct: 63  TH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.0 bits (87), Expect = 7e-04
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 130 SHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLI 189
            H  +H  +    + +KC  C   F +K +L  H  +H   + + C+ C   F    +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 190 RHMRSH 195
            H R H
Sbjct: 63  THTRIH 68

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 22/178 (12%), Positives = 52/178 (29%), Gaps = 26/178 (14%)

Query: 139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHN---------CDFCHLTFTTDND-- 187
           H  S V K      + +   +L+  + L     +H            F            
Sbjct: 412 HKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ 471

Query: 188 -----LIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIKIIHNLFTCIHCG---DTLNN 239
                +  H+++ E         +    F++   L+   KI H+       G   +TL  
Sbjct: 472 YFYSHIGHHLKNIEHPERM---TLFRMVFLDFRFLEQ--KIRHDSTAWNASGSILNTLQQ 526

Query: 240 AKDYASHLLIIHNIESSQQVEKNLNNMYNLLTTHIEYHHSQNNIESESNQSSGFMYND 297
            K Y  +  I  N    +++   + +    +  ++      + +          ++ +
Sbjct: 527 LKFYKPY--ICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEE 582

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 36/149 (24%)

Query: 156 HKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDL 215
           H  H+D      ET E               D++                   + F+++ 
Sbjct: 3   HHHHMD-----FETGEHQYQY---------KDILSVFE---------------DAFVDNF 33

Query: 216 KLKAHIKIIHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQ------VEKNLNNMYNL 269
             K    +  ++ +       + +    +  L +   + S Q+      VE+ L   Y  
Sbjct: 34  DCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93

Query: 270 LTTHIEYHHSQNNIESES-NQSSGFMYND 297
           L + I+    Q ++ +    +    +YND
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYND 122

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 62  FRCKS--CGRRFESEELLIVHQVI---HERKFHKCTQ--CEESFKNKKHLKQHLLAHEKV 114
             C    CGR F + + L  H+     H++ F  C +  C +SF  KKHLK+H+  H   
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSF-SCPEPACGKSFNFKKHLKEHMKLHSDT 66

Query: 115 KVFHCPKCPKLF 126
           + + C       
Sbjct: 67  RDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 6/76 (7%)

Query: 84  HERKFHKCT--QCEESFKNKKHLKQHL-LAHEKVKVFHCP--KCPKLFRHESHLQNHVIV 138
                  C    C   F N+++L  H    H   K F CP   C K F  + HL+ H+ +
Sbjct: 4   GSSGM-PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKL 62

Query: 139 HDESEVHKCLYCFKVF 154
           H ++  + C +     
Sbjct: 63  HSDTRDYICEFSGPSS 78

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 77  LIVHQVIHERKFHKCT--QCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQN 134
           L+ + V   R +  C    C+  F     L +H+  H   K F C  C + F    HL  
Sbjct: 9   LLNYVVPKMRPY-ACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 135 HVIVH 139
           H+  H
Sbjct: 68  HIRTH 72

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.8 bits (85), Expect = 4e-04
 Identities = 11/38 (28%), Positives = 17/38 (44%)

Query: 85  ERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKC 122
            RK   C  C + F++  HL +H L+H   K +     
Sbjct: 9   TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%)

Query: 130 SHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILHETSEMHNCDF--CHLTFTTD 185
           S      I       H C +  C K +   +HL  H   H   +  +C +  C   F   
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 186 NDLIRHMRSH 195
           ++L RH R+H
Sbjct: 63  DELSRHRRTH 72

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	367
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.9
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.77
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.77
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.77
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.74
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.73
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.72
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.66
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.66
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.65
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.59
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.58
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.56
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.5
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.5
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.49
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.48
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.47
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.45
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.44
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.44
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.42
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.41
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.4
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.4
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.37
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.32
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.31
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.31
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.15
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.12
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.1
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.1
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.09
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.03
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.02
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.98
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.98
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.98
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.98
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.95
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.95
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.94
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.94
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.93
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.93
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.92
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.91
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.9
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.9
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.89
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.89
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.89
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.89
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.88
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.88
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.87
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.87
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.85
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.82
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.8
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.8
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.8
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.79
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.79
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.78
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.72
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.71
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.68
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.67
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.59
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.57
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.52
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.52
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.51
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.47
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.44
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.44
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.44
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.39
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.39
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.38
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.32
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.26
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.26
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.21
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.21
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.21
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.2
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.17
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.14
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.14
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.13
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.13
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.13
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.13
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.12
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.09
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.08
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.35
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.35
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.06
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.01
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.01
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.24
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.97
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.96
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.2
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.95
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.95
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.95
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.18
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.93
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.92
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.92
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.91
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.91
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.14
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.88
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.87
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.87
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.87
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.85
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.82
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.72
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.45
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.32
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.25
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.11
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.74
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.32
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.13
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.45
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.26
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.1
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.67
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.51
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.27
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	88.77
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.88
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	82.38
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	80.51
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	80.29

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.8e-39  Score=271.03  Aligned_cols=184  Identities=28%  Similarity=0.509  Sum_probs=140.1

Q ss_pred             HHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc-Ccccccccccc
Q psy2876          18 STSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE-RKFHKCTQCEE   96 (367)
Q Consensus        18 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~   96 (367)
                      ...|..|++.+.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|. +++|.|+.|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            46788999999999999999999999999999999999999999999999999999999999999887 78899999999


Q ss_pred             ccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876          97 SFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus        97 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCChHHHHHHHHHHhccCCcc
Q psy2876         177 FCHLTFTTDNDLIRHMRSHEEYHTKH  202 (367)
Q Consensus       177 ~C~~~f~~~~~L~~H~~~h~~~~~~~  202 (367)
                      +|++.|.+...|..|+++|+++ +||
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~-k~~  190 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGK-KTS  190 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC-------
T ss_pred             CCCCccCCHHHHHHHHHhcCCC-CCC
Confidence            9999999999999999998887 664

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4.4e-38  Score=264.53  Aligned_cols=172  Identities=31%  Similarity=0.596  Sum_probs=148.0

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHH
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQ   81 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   81 (367)
                      +++||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+
T Consensus        18 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   97 (190)
T 2i13_A           18 GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQ   97 (190)
T ss_dssp             -------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhc-CccccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHH
Q psy2876          82 VIHE-RKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHL  160 (367)
Q Consensus        82 ~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  160 (367)
                      ++|. +++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.+...|
T Consensus        98 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L  177 (190)
T 2i13_A           98 RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL  177 (190)
T ss_dssp             HHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHH
T ss_pred             HhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHH
Confidence            9987 789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCc
Q psy2876         161 DKHLILHETSEMH  173 (367)
Q Consensus       161 ~~H~~~h~~~~~~  173 (367)
                      ..|+++|++++||
T Consensus       178 ~~H~~~H~~~k~~  190 (190)
T 2i13_A          178 NVHQRTHTGKKTS  190 (190)
T ss_dssp             HHHHTTC------
T ss_pred             HHHHHhcCCCCCC
Confidence            9999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.2e-32  Score=231.30  Aligned_cols=165  Identities=28%  Similarity=0.499  Sum_probs=128.6

Q ss_pred             CCccccc--cccccccCCHHHHHHHHHHhCCCccccc--cccccccCCHHHHHHHHHhcCCCCceecc--cccccccCHH
Q psy2876           2 EKTLYKC--LYCHKVFKKSTSFDKHMEHHNRNVLHKC--HLCTKAYPSEKNLDRHLLTHNVRRSFRCK--SCGRRFESEE   75 (367)
Q Consensus         2 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~   75 (367)
                      ++++|.|  +.|++.|.+...|..|++.|+++++|.|  +.|++.|.+...|..|++.|+++++|.|+  .|++.|.+..
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            4678888  6799999998999999988888888988  77999999988999998888888888888  7888888888


Q ss_pred             HHHHHH-HHhc--Cccccc--cccccccCCHHHHHHHHHHccCCcceeCCC--CCCccCChhhhhhhhhccCCCcceecc
Q psy2876          76 LLIVHQ-VIHE--RKFHKC--TQCEESFKNKKHLKQHLLAHEKVKVFHCPK--CPKLFRHESHLQNHVIVHDESEVHKCL  148 (367)
Q Consensus        76 ~L~~H~-~~h~--~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  148 (367)
                      .|..|+ +.|.  .++|.|  +.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|+++|.+   |.|+
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C~  165 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCK  165 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCCC
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcCC
Confidence            888888 5552  567777  777777777777777777777777777766  77777777777777777666   6666


Q ss_pred             c---cccccCCHHHHHHHHHHhCC
Q psy2876         149 Y---CFKVFVHKAHLDKHLILHET  169 (367)
Q Consensus       149 ~---C~~~f~~~~~l~~H~~~h~~  169 (367)
                      .   |++.|.+...|..|+++|++
T Consensus       166 ~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          166 KDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             STTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCCcCCCccccHHHHHHHHHhhcC
Confidence            6   67777776667777666654

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=9.5e-32  Score=225.80  Aligned_cols=166  Identities=27%  Similarity=0.458  Sum_probs=130.8

Q ss_pred             Cccccc--cccccccCCHHHHHHHHHHccCCcceeC--CCCCCccCChhhhhhhhhccCCCcceecc--ccccccCCHHH
Q psy2876          86 RKFHKC--TQCEESFKNKKHLKQHLLAHEKVKVFHC--PKCPKLFRHESHLQNHVIVHDESEVHKCL--YCFKVFVHKAH  159 (367)
Q Consensus        86 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~  159 (367)
                      .++|.|  +.|++.|.+...|..|++.|.++++|.|  +.|++.|.+...|..|+++|.++++|.|+  .|++.|.+...
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            566777  5788888888888888888877788888  77888888888888888888888888888  78888888888


Q ss_pred             HHHHH-HHh-CCCCCccC--CccccccCChHHHHHHHHHHhccCCcccccc--cccccCCHHHHHHHHHhcCCcccccc-
Q psy2876         160 LDKHL-ILH-ETSEMHNC--DFCHLTFTTDNDLIRHMRSHEEYHTKHTCDI--CGEKFINDLKLKAHIKIIHNLFTCIH-  232 (367)
Q Consensus       160 l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~C~~-  232 (367)
                      |..|+ +.| .+.++|.|  +.|++.|.+...|..|+++|+++ ++|.|++  |++.|.+...|..|++ .|..|.|+. 
T Consensus        90 l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~-~~~~C~~~~C~k~F~~~~~L~~H~~-~H~~~~C~~~  167 (190)
T 1tf6_A           90 MKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ-LPYECPHEGCDKRFSLPSRLKRHEK-VHAGYPCKKD  167 (190)
T ss_dssp             HHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSS-CSSBCCSSSCCCBCSSHHHHHHHHT-SSCSCCCCST
T ss_pred             HHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCC-CCccCCCCCCCchhcCHHHHHHHHH-HhCCCcCCCC
Confidence            88888 455 35677888  77888888888888888888777 7888877  8888888888888887 666688888 


Q ss_pred             --cccccCCHHHHHHhHhhhcCCC
Q psy2876         233 --CGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       233 --C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                        |++.|.+...|..|+ ++|.++
T Consensus       168 ~~C~~~f~~~~~l~~H~-~~h~~e  190 (190)
T 1tf6_A          168 DSCSFVGKTWTLYLKHV-AECHQD  190 (190)
T ss_dssp             TTCCCCCSCHHHHHHHH-TTCC--
T ss_pred             CcCCCccccHHHHHHHH-HhhcCC
Confidence              888888888888888 666653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=3.6e-28  Score=197.04  Aligned_cols=134  Identities=30%  Similarity=0.545  Sum_probs=58.2

Q ss_pred             ccccccccccCCHHHHHHHHH---hcCCCCceeccc-----ccccccCHHHHHHHHHHhc-Cccccccc--cccccCCHH
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLL---THNVRRSFRCKS-----CGRRFESEELLIVHQVIHE-RKFHKCTQ--CEESFKNKK  102 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~-----C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~  102 (367)
                      |.|+.|++.|.+...|..|++   .|.++++|.|++     |++.|.+...|..|+++|. +++|.|+.  |++.|.+..
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   83 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE   83 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH
Confidence            344444444444444444443   233334444433     3344444444444444443 33444442  444444444


Q ss_pred             HHHHHHHHccCCcceeCCC--CCCccCChhhhhhhh-hccCCCcceeccc--cccccCCHHHHHHHHHHh
Q psy2876         103 HLKQHLLAHEKVKVFHCPK--CPKLFRHESHLQNHV-IVHDESEVHKCLY--CFKVFVHKAHLDKHLILH  167 (367)
Q Consensus       103 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  167 (367)
                      .|..|+++|.++++|.|+.  |++.|.+...|..|+ ++|.++++|.|+.  |++.|.+...|..|+++|
T Consensus        84 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h  153 (155)
T 2gli_A           84 NLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV  153 (155)
T ss_dssp             HHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhh
Confidence            4444444444444444444  444444444444444 3444444444443  444444444444444443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.9e-27  Score=192.69  Aligned_cols=137  Identities=23%  Similarity=0.417  Sum_probs=81.4

Q ss_pred             ccccccccccccCCHHHHHHHHH---HhCCCcccccccc-----ccccCCHHHHHHHHHhcCCCCceeccc--ccccccC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHME---HHNRNVLHKCHLC-----TKAYPSEKNLDRHLLTHNVRRSFRCKS--CGRRFES   73 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~C-----~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~   73 (367)
                      .+|+|+.|++.|.+...|..|++   .|.++++|.|++|     ++.|.+...|..|++.|+++++|.|++  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            35566666666666666666665   4555555655432     255666666666666666666666653  6666666


Q ss_pred             HHHHHHHHHHhc-Cccccccc--cccccCCHHHHHHHH-HHccCCcceeCCC--CCCccCChhhhhhhhhccC
Q psy2876          74 EELLIVHQVIHE-RKFHKCTQ--CEESFKNKKHLKQHL-LAHEKVKVFHCPK--CPKLFRHESHLQNHVIVHD  140 (367)
Q Consensus        74 ~~~L~~H~~~h~-~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  140 (367)
                      ...|..|+++|. +++|.|+.  |++.|.+...|..|+ +.|.++++|.|+.  |++.|.+...|..|+++|+
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence            666666666554 45566665  666666666666665 5565666666655  6666666666666665554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.90  E-value=1e-23  Score=163.87  Aligned_cols=110  Identities=27%  Similarity=0.509  Sum_probs=85.8

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHh---cCCCCceecccccccccCHHHH
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLT---HNVRRSFRCKSCGRRFESEELL   77 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~L   77 (367)
                      +|+++|+|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.   +.++++|.|++|++.|.+...|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4678888888888888888888888888888888888888888888888888875   4566777777777777777777


Q ss_pred             HHHHHHhc-CccccccccccccCCHHHHHHHHHH
Q psy2876          78 IVHQVIHE-RKFHKCTQCEESFKNKKHLKQHLLA  110 (367)
Q Consensus        78 ~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~  110 (367)
                      ..|+++|. +++|.|+.|++.|.+...|..|++.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  116 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK  116 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHHH
Confidence            77777765 5667777777777777777777653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=6.6e-24  Score=163.80  Aligned_cols=111  Identities=28%  Similarity=0.605  Sum_probs=90.3

Q ss_pred             CCCccccccc--cccccCCHHHHHHHHHHhCCCcccccc--ccccccCCHHHHHHHHHhcCCCCceecccccccccCHHH
Q psy2876           1 MEKTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEEL   76 (367)
Q Consensus         1 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   76 (367)
                      +|+++|.|++  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++|.|++|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            4678888886  888888888888888888888888888  688888888888888888888888888888888888888


Q ss_pred             HHHHHHHhc-Cccccc--cccccccCCHHHHHHHHHHc
Q psy2876          77 LIVHQVIHE-RKFHKC--TQCEESFKNKKHLKQHLLAH  111 (367)
Q Consensus        77 L~~H~~~h~-~~~~~C--~~C~~~f~~~~~l~~H~~~h  111 (367)
                      |..|+++|. +++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            888887776 567777  67777777777777777654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=2.1e-23  Score=162.14  Aligned_cols=105  Identities=30%  Similarity=0.546  Sum_probs=40.8

Q ss_pred             cccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhc---cCCCcceeccccccccCCHHHHHHHH
Q psy2876          88 FHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIV---HDESEVHKCLYCFKVFVHKAHLDKHL  164 (367)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~~H~  164 (367)
                      +|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..   +.++++|.|++|++.|.+...|..|+
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM   86 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence            334444444444444444444444333334444444444444444444332   22333333333333333333333333


Q ss_pred             HHhCCCCCccCCccccccCChHHHHHHH
Q psy2876         165 ILHETSEMHNCDFCHLTFTTDNDLIRHM  192 (367)
Q Consensus       165 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~  192 (367)
                      ++|++++||.|++|++.|.+...|..|+
T Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~  114 (124)
T 2dlq_A           87 VSHTGEMPYKCSSCSQQFMQKKDLQSHM  114 (124)
T ss_dssp             HHHSSSCSEECSSSCCEESSHHHHHHHH
T ss_pred             HHcCCCCCccCCCccchhCCHHHHHHHH
Confidence            3333333333333333333333333333

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=5.5e-24  Score=166.81  Aligned_cols=106  Identities=23%  Similarity=0.450  Sum_probs=79.0

Q ss_pred             hhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccC
Q psy2876         133 QNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFI  212 (367)
Q Consensus       133 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~  212 (367)
                      ..|..+|.|+++|.|++|+++|.+...|..|+++|.+++||.|++|++.|.+...|..|+++|+++ +||.|++|++.|.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~-k~~~C~~C~k~F~   89 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGE-RRYQCLACGKSFI   89 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTC-CCEEESSSCCEES
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCC-ccccCCCCCCCcC
Confidence            344556777777777777777777777777777777777777777777777777777777777776 7777777777777


Q ss_pred             CHHHHHHHHHhcCC--------cccccccccccCC
Q psy2876         213 NDLKLKAHIKIIHN--------LFTCIHCGDTLNN  239 (367)
Q Consensus       213 ~~~~l~~H~~~~H~--------~~~C~~C~~~f~~  239 (367)
                      +...|..|++..|+        +|+|..|++.|..
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            77777777775553        5777777777754

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=6e-24  Score=166.59  Aligned_cols=102  Identities=23%  Similarity=0.492  Sum_probs=52.8

Q ss_pred             HhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc-CccccccccccccCCHHHHH
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKHLK  105 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~l~  105 (367)
                      +|.|+++|.|++|++.|.+...|..|+++|++++||.|++|++.|.+...|..|+++|. +++|.|+.|++.|.+...|.
T Consensus        16 ~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           16 IVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             ecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            34444455555555555555555555555545555555555555555555555554443 44455555555555555555


Q ss_pred             HHHHHccCC------cceeCCCCCCccCC
Q psy2876         106 QHLLAHEKV------KVFHCPKCPKLFRH  128 (367)
Q Consensus       106 ~H~~~h~~~------~~~~C~~C~~~f~~  128 (367)
                      .|+++|+++      ++|.|..|++.|..
T Consensus        96 ~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           96 SHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            555544433      34677777766653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=3e-23  Score=160.05  Aligned_cols=109  Identities=27%  Similarity=0.485  Sum_probs=73.4

Q ss_pred             CCcceeCCC--CCCccCChhhhhhhhhccCCCcceecc--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHH
Q psy2876         113 KVKVFHCPK--CPKLFRHESHLQNHVIVHDESEVHKCL--YCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDL  188 (367)
Q Consensus       113 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  188 (367)
                      ++++|.|+.  |++.|.+...|..|+++|.++++|.|+  .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            455666665  666666666666666666666666666  5666666666666666666666667777777777766677


Q ss_pred             HHHHHHHhccCCcccc--cccccccCCHHHHHHHHH
Q psy2876         189 IRHMRSHEEYHTKHTC--DICGEKFINDLKLKAHIK  222 (367)
Q Consensus       189 ~~H~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~  222 (367)
                      ..|+++|+++ ++|.|  +.|++.|.+...|..|++
T Consensus        83 ~~H~~~h~~~-~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           83 KTHTRTHTGE-KPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHHTC-CCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHhcCC-CCeeCCCCCCccccCCHHHHHHHHh
Confidence            7776666665 66666  566666666666666666

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=1.6e-23  Score=162.98  Aligned_cols=115  Identities=33%  Similarity=0.647  Sum_probs=79.2

Q ss_pred             CCcccccc--ccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc--ccccccCHHHH
Q psy2876           2 EKTLYKCL--YCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS--CGRRFESEELL   77 (367)
Q Consensus         2 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L   77 (367)
                      ++++|.|+  .|++.|.+...|..|++.| ++++|.|+.|++.|.+...|..|++.|+++++|.|+.  |++.|.+...|
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            45678887  7888888888888888777 6777888888888888888888887777777777764  77777777777


Q ss_pred             HHHHHHhc-Ccccccc--ccccccCCHHHHHHHHHHccCCcce
Q psy2876          78 IVHQVIHE-RKFHKCT--QCEESFKNKKHLKQHLLAHEKVKVF  117 (367)
Q Consensus        78 ~~H~~~h~-~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  117 (367)
                      ..|+++|. +++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            77776665 5566664  3666666666666666666665543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.89  E-value=2.8e-23  Score=168.09  Aligned_cols=117  Identities=23%  Similarity=0.416  Sum_probs=70.3

Q ss_pred             ccccccccccccCCHHHHHHHHHh-cCCCCc--------eecccccccccCHHHHHHHHHHhc-Cccccccc--cccccC
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLT-HNVRRS--------FRCKSCGRRFESEELLIVHQVIHE-RKFHKCTQ--CEESFK   99 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~--C~~~f~   99 (367)
                      .+|.|..|++.|.+...|..|++. |.+..+        |.|+.|++.|.+...|..|+++|. +++|.|+.  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            345555555555555555555544 333222        556666666666666666665554 45566665  666666


Q ss_pred             CHHHHHHHHHHccCCcceeCCC--CCCccCChhhhhhhhhccCCCcceecc
Q psy2876         100 NKKHLKQHLLAHEKVKVFHCPK--CPKLFRHESHLQNHVIVHDESEVHKCL  148 (367)
Q Consensus       100 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  148 (367)
                      +...|..|+++|.++++|.|+.  |++.|.+...|..|+++|++++||.|.
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            6666666666666666666665  666666666666666666666666664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=4.2e-23  Score=160.52  Aligned_cols=115  Identities=25%  Similarity=0.553  Sum_probs=91.5

Q ss_pred             Ccccccc--ccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccc--cccccCCHHHHH
Q psy2876          86 RKFHKCT--QCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVHKAHLD  161 (367)
Q Consensus        86 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  161 (367)
                      .++|.|+  .|++.|.+...|..|+++| +.++|.|+.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            3567787  7888888888888888877 7778888888888888888888888888888888875  888888888888


Q ss_pred             HHHHHhCCCCCccCC--ccccccCChHHHHHHHHHHhccCCcc
Q psy2876         162 KHLILHETSEMHNCD--FCHLTFTTDNDLIRHMRSHEEYHTKH  202 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~  202 (367)
                      .|+++|.++++|.|+  .|++.|.+...|..|+++|+++ +++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~-k~~  123 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA-KNN  123 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc-ccC
Confidence            888888888888885  4888888888888888888876 544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=5.4e-23  Score=166.41  Aligned_cols=117  Identities=25%  Similarity=0.475  Sum_probs=66.1

Q ss_pred             cccccccccccCCHHHHHHHHHH-ccCCcc--------eeCCCCCCccCChhhhhhhhhccCCCcceeccc--cccccCC
Q psy2876          88 FHKCTQCEESFKNKKHLKQHLLA-HEKVKV--------FHCPKCPKLFRHESHLQNHVIVHDESEVHKCLY--CFKVFVH  156 (367)
Q Consensus        88 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~  156 (367)
                      .|.|+.|++.|.+...|..|++. |.+..+        |.|+.|++.|.+...|..|+++|.++++|.|+.  |++.|..
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            34444444444444444444443 332222        456666666666666666666665566666655  6666666


Q ss_pred             HHHHHHHHHHhCCCCCccCCc--cccccCChHHHHHHHHHHhccCCccccc
Q psy2876         157 KAHLDKHLILHETSEMHNCDF--CHLTFTTDNDLIRHMRSHEEYHTKHTCD  205 (367)
Q Consensus       157 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~C~  205 (367)
                      ...|..|+++|+++++|.|++  |++.|.+...|..|+++|+++ ++|.|+
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~-k~~~c~  154 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD-KSGPSS  154 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC-CCSCSC
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC-CCCCCC
Confidence            666666666666666666664  666666666666666666655 566553

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=4e-19  Score=133.86  Aligned_cols=87  Identities=28%  Similarity=0.607  Sum_probs=58.1

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHH
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQV   82 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   82 (367)
                      +++|.|++|++.|.....|..|++.|.++++|.|++|++.|.+...|..|++.|+++++|.|.+|++.|.+...|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            45677777777777777777777777666677777777777777777777766666666666666666666666666666


Q ss_pred             Hhc-Cccc
Q psy2876          83 IHE-RKFH   89 (367)
Q Consensus        83 ~h~-~~~~   89 (367)
                      +|. +++|
T Consensus        95 ~H~~~~~~  102 (106)
T 2ee8_A           95 LHMQTSSP  102 (106)
T ss_dssp             HTTSCCCC
T ss_pred             HhCCCCCC
Confidence            654 3444

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=4.4e-19  Score=131.05  Aligned_cols=84  Identities=29%  Similarity=0.509  Sum_probs=63.0

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHH
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQ   81 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   81 (367)
                      +++||+|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|+++++|.|++|++.|.+...|..|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   84 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL   84 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            46677777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHhc
Q psy2876          82 VIHE   85 (367)
Q Consensus        82 ~~h~   85 (367)
                      ++|+
T Consensus        85 ~~h~   88 (96)
T 2dmd_A           85 RSHT   88 (96)
T ss_dssp             TTCC
T ss_pred             HHhc
Confidence            6665

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.77  E-value=4.5e-19  Score=129.31  Aligned_cols=84  Identities=27%  Similarity=0.636  Sum_probs=73.0

Q ss_pred             CCcccccc--ccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHH
Q psy2876           2 EKTLYKCL--YCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIV   79 (367)
Q Consensus         2 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   79 (367)
                      |++||.|+  .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            57889998  5999999999999999999888899999999999999999999998888888888888888888888888


Q ss_pred             HHHHhc
Q psy2876          80 HQVIHE   85 (367)
Q Consensus        80 H~~~h~   85 (367)
                      |+++|.
T Consensus        81 H~~~H~   86 (90)
T 1a1h_A           81 HTKIHL   86 (90)
T ss_dssp             HHGGGG
T ss_pred             HHHHhc
Confidence            888876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.77  E-value=5.5e-19  Score=126.43  Aligned_cols=81  Identities=26%  Similarity=0.646  Sum_probs=73.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHh
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH   84 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h   84 (367)
                      ||.|++|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            68899999999999999999999999999999999999999999999999999989999999999999999999998887


Q ss_pred             c
Q psy2876          85 E   85 (367)
Q Consensus        85 ~   85 (367)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.77  E-value=9.7e-19  Score=131.74  Aligned_cols=89  Identities=26%  Similarity=0.449  Sum_probs=49.9

Q ss_pred             CcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHH
Q psy2876         114 VKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMR  193 (367)
Q Consensus       114 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  193 (367)
                      +++|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|..|++
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   94 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT   94 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHH
Confidence            34455555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHhccCCccc
Q psy2876         194 SHEEYHTKHT  203 (367)
Q Consensus       194 ~h~~~~~~~~  203 (367)
                      +|+++ ++|.
T Consensus        95 ~H~~~-~~~~  103 (106)
T 2ee8_A           95 LHMQT-SSPT  103 (106)
T ss_dssp             HTTSC-CCCC
T ss_pred             HhCCC-CCCc
Confidence            55554 4443

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=8e-19  Score=129.66  Aligned_cols=87  Identities=25%  Similarity=0.470  Sum_probs=64.4

Q ss_pred             cCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHH
Q psy2876         112 EKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRH  191 (367)
Q Consensus       112 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  191 (367)
                      .++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            45567777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhcc
Q psy2876         192 MRSHEEY  198 (367)
Q Consensus       192 ~~~h~~~  198 (367)
                      +++|+++
T Consensus        84 ~~~h~~~   90 (96)
T 2dmd_A           84 LRSHTGD   90 (96)
T ss_dssp             HTTCCSC
T ss_pred             HHHhcCC
Confidence            7777665

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.2e-18  Score=128.38  Aligned_cols=85  Identities=21%  Similarity=0.516  Sum_probs=64.5

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCC--CceecccccccccCHHHHH
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR--RSFRCKSCGRRFESEELLI   78 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~   78 (367)
                      +|+++|+|++|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|++.|+++  ++|.|++|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            36677888888888888888888888887777788888888888888888887777765  6777777777777777777


Q ss_pred             HHHH-Hhc
Q psy2876          79 VHQV-IHE   85 (367)
Q Consensus        79 ~H~~-~h~   85 (367)
                      .|++ .|.
T Consensus        83 ~H~~~~H~   90 (95)
T 2yt9_A           83 GHIKQVHS   90 (95)
T ss_dssp             HHHHHTSC
T ss_pred             HHHHHhcC
Confidence            7764 443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.75  E-value=1.1e-18  Score=127.23  Aligned_cols=85  Identities=25%  Similarity=0.613  Sum_probs=48.5

Q ss_pred             CcceeCC--CCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHH
Q psy2876         114 VKVFHCP--KCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRH  191 (367)
Q Consensus       114 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  191 (367)
                      +++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+.+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            3455555  35555555555555555555555555555555565555566665555555556666666666666666666


Q ss_pred             HHHHhcc
Q psy2876         192 MRSHEEY  198 (367)
Q Consensus       192 ~~~h~~~  198 (367)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            6555543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.75  E-value=1.2e-18  Score=124.59  Aligned_cols=78  Identities=33%  Similarity=0.750  Sum_probs=32.2

Q ss_pred             eCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHH
Q psy2876         118 HCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       118 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      .|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            333344444333333334333333334444444444444444444444444444444444444444444444444443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.9e-18  Score=131.05  Aligned_cols=84  Identities=25%  Similarity=0.495  Sum_probs=73.0

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHH
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVH   80 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   80 (367)
                      +++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++.|+++++|.|++|++.|.....|..|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            46788888 89888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHhc
Q psy2876          81 QVIHE   85 (367)
Q Consensus        81 ~~~h~   85 (367)
                      ++.|+
T Consensus        85 ~~~~~   89 (110)
T 2csh_A           85 VTSCT   89 (110)
T ss_dssp             HHHHH
T ss_pred             HHHcc
Confidence            88765

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.4e-18  Score=128.99  Aligned_cols=93  Identities=23%  Similarity=0.344  Sum_probs=66.8

Q ss_pred             HHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc-CccccccccccccCCHHH
Q psy2876          25 MEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE-RKFHKCTQCEESFKNKKH  103 (367)
Q Consensus        25 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~  103 (367)
                      ++.|.++++|.|++|++.|.+...|..|++.|  .++|.|++|++.|.....|..|++ |. +++|.|+.|++.|.....
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHH
Confidence            34566677777777777777777777777776  356777777777777777777774 54 667777777777777777


Q ss_pred             HHHHHH-HccCCcceeCC
Q psy2876         104 LKQHLL-AHEKVKVFHCP  120 (367)
Q Consensus       104 l~~H~~-~h~~~~~~~C~  120 (367)
                      |..|++ .|.++++|.+.
T Consensus        85 L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCCC
Confidence            777775 77777777664

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=2e-18  Score=130.27  Aligned_cols=91  Identities=18%  Similarity=0.381  Sum_probs=44.2

Q ss_pred             hcCCCCceecccccccccCHHHHHHHHHHhcCccccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhh
Q psy2876          55 THNVRRSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQN  134 (367)
Q Consensus        55 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  134 (367)
                      .|.++++|.|++|++.|.....|..|+++| .++|.|+.|++.|.....|..|++ |.++++|.|+.|++.|.....|..
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H-~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~   87 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWR   87 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH-HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC-CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHH
Confidence            344444455555555555555555554444 234455555555555555555543 444445555555555555555555


Q ss_pred             hhh-ccCCCcceec
Q psy2876         135 HVI-VHDESEVHKC  147 (367)
Q Consensus       135 H~~-~h~~~~~~~C  147 (367)
                      |++ +|.++++|.+
T Consensus        88 H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           88 HQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHTSCCCCCCCC
T ss_pred             HHHHHcCCCCCCCC
Confidence            543 4444444443

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=5.3e-19  Score=135.26  Aligned_cols=98  Identities=14%  Similarity=0.195  Sum_probs=77.6

Q ss_pred             ChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHH--hCCCCCcc-CCcccccc--CChHHHHHHHHHHhccCCcc
Q psy2876         128 HESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLIL--HETSEMHN-CDFCHLTF--TTDNDLIRHMRSHEEYHTKH  202 (367)
Q Consensus       128 ~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~h~~~~~~~  202 (367)
                      +...|..|+++|.++++|.|+.|++.|.+...|..|++.  |.+.+++. |+.|++.|  .....|..|+++|+++ ++|
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~-~~~   81 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ-KVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCC-SSC
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCC-cce
Confidence            345677888888888888888888888888888888887  66666554 88888887  7888888888888777 888


Q ss_pred             cccccccccCCHHHHHHHHHhcCC
Q psy2876         203 TCDICGEKFINDLKLKAHIKIIHN  226 (367)
Q Consensus       203 ~C~~C~~~f~~~~~l~~H~~~~H~  226 (367)
                      .|++|++.|.....|..|++..|.
T Consensus        82 ~C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             ECCCCCCccCCHHHHHHHHHHhCC
Confidence            888888888888888888874443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=8.6e-18  Score=123.79  Aligned_cols=81  Identities=26%  Similarity=0.467  Sum_probs=40.5

Q ss_pred             CCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCC--CCccCCccccccCChHHHHH
Q psy2876         113 KVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETS--EMHNCDFCHLTFTTDNDLIR  190 (367)
Q Consensus       113 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~~  190 (367)
                      ++++|.|+.|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|++.|+++  ++|.|++|++.|.+...|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            3444555555555555555555555555445555555555555555555555554443  44555555555555555555


Q ss_pred             HHH
Q psy2876         191 HMR  193 (367)
Q Consensus       191 H~~  193 (367)
                      |++
T Consensus        84 H~~   86 (95)
T 2yt9_A           84 HIK   86 (95)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.3e-18  Score=133.14  Aligned_cols=85  Identities=21%  Similarity=0.375  Sum_probs=49.7

Q ss_pred             cccccccccCCHHHHHHHHHH--ccCCcce-eCCCCCCcc--CChhhhhhhhhccCCCcceeccccccccCCHHHHHHHH
Q psy2876          90 KCTQCEESFKNKKHLKQHLLA--HEKVKVF-HCPKCPKLF--RHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHL  164 (367)
Q Consensus        90 ~C~~C~~~f~~~~~l~~H~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  164 (367)
                      .|+.|++.|.+...|..|++.  |.+.+++ .|+.|++.|  .....|..|+++|.+++||.|++|++.|.....|..|+
T Consensus        21 ~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM  100 (115)
T ss_dssp             EBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHH
T ss_pred             ECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHH
Confidence            333333333333333333333  3333333 377777666  66777777777777777777777777777777777777


Q ss_pred             HHhCCCCCcc
Q psy2876         165 ILHETSEMHN  174 (367)
Q Consensus       165 ~~h~~~~~~~  174 (367)
                      +.|+......
T Consensus       101 ~~hh~~~~~~  110 (115)
T 2dmi_A          101 IKTKHYQKVS  110 (115)
T ss_dssp             HHTTTTTCSC
T ss_pred             HHhCCcccCC
Confidence            7766554443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.72  E-value=4.3e-18  Score=112.97  Aligned_cols=59  Identities=20%  Similarity=0.549  Sum_probs=53.8

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      .||||+|++||+.|.....|..|+++|++++||.|++|++.|...+.|..|+++|+++.
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            37899999999999999999999999999999999999999999999999999998764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=7.2e-18  Score=127.85  Aligned_cols=85  Identities=28%  Similarity=0.489  Sum_probs=49.1

Q ss_pred             ccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHH
Q psy2876         111 HEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIR  190 (367)
Q Consensus       111 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  190 (367)
                      |.++++|.| .|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|.++++|.|++|++.|.....|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            445555555 5555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHh
Q psy2876         191 HMRSHE  196 (367)
Q Consensus       191 H~~~h~  196 (367)
                      |+++|+
T Consensus        84 H~~~~~   89 (110)
T 2csh_A           84 HVTSCT   89 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHcc
Confidence            555554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.69  E-value=6e-17  Score=120.40  Aligned_cols=83  Identities=29%  Similarity=0.625  Sum_probs=69.4

Q ss_pred             Cccccccc--cccccCCHHHHHHHHHHhCCCcccccc--ccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHH
Q psy2876           3 KTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLI   78 (367)
Q Consensus         3 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   78 (367)
                      +++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++|.|++|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            56788886  888888888888888888888888886  58888888888888888888888888888888888888888


Q ss_pred             HHHHHhc
Q psy2876          79 VHQVIHE   85 (367)
Q Consensus        79 ~H~~~h~   85 (367)
                      .|+++|.
T Consensus        93 ~H~~~H~   99 (100)
T 2ebt_A           93 LHMKRHQ   99 (100)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            8888774

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=5e-18  Score=123.20  Aligned_cols=81  Identities=14%  Similarity=0.302  Sum_probs=64.1

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHH
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQV   82 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~   82 (367)
                      ++||.|++|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|++.|++ .+|.|+.|++.|.+...|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46788888888888888888888888888888888888888888888888877774 67778888877777777777776


Q ss_pred             Hh
Q psy2876          83 IH   84 (367)
Q Consensus        83 ~h   84 (367)
                      ..
T Consensus        80 ~~   81 (88)
T 1llm_C           80 RL   81 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=2.3e-17  Score=119.85  Aligned_cols=82  Identities=28%  Similarity=0.607  Sum_probs=71.7

Q ss_pred             Cccccccc--cccccCCHHHHHHHHHHhCCCcccccc--ccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHH
Q psy2876           3 KTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLI   78 (367)
Q Consensus         3 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   78 (367)
                      .++|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46788988  999999999999999988888889997  59999999999999988888888888988988888888888


Q ss_pred             HHHHHh
Q psy2876          79 VHQVIH   84 (367)
Q Consensus        79 ~H~~~h   84 (367)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            888876

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=1.7e-17  Score=120.40  Aligned_cols=81  Identities=20%  Similarity=0.393  Sum_probs=55.2

Q ss_pred             cceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHHHHH
Q psy2876         143 EVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKAHIK  222 (367)
Q Consensus       143 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~  222 (367)
                      +||.|+.|++.|.+...|..|+++|.+++||.|+.|++.|.....|..|++.|++  .+|.|+.|++.|.+...|..|++
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI--LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC--CcchHHHHHHHHHHHhhhHHHHH
Confidence            4666777777777777777777777766777777777777777777777766664  46666666666666666666666


Q ss_pred             hcC
Q psy2876         223 IIH  225 (367)
Q Consensus       223 ~~H  225 (367)
                      ..|
T Consensus        80 ~~h   82 (88)
T 1llm_C           80 RLK   82 (88)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.66  E-value=2e-16  Score=117.49  Aligned_cols=78  Identities=32%  Similarity=0.679  Sum_probs=35.4

Q ss_pred             ceeccc--cccccCCHHHHHHHHHHhCCCCCccCC--ccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHH
Q psy2876         144 VHKCLY--CFKVFVHKAHLDKHLILHETSEMHNCD--FCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKA  219 (367)
Q Consensus       144 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~  219 (367)
                      +|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++ ++|.|++|++.|.....|..
T Consensus        15 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-~~~~C~~C~~~f~~~~~l~~   93 (100)
T 2ebt_A           15 IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA-KPFQCGVCNRSFSRSDHLAL   93 (100)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSC-CSCBCSSSCCBCSSHHHHHH
T ss_pred             ceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCC-CCeECCCCcCccCCHHHHHH
Confidence            344443  444444444444444444444444443  2444444444444444444443 44444444444444444444


Q ss_pred             HHH
Q psy2876         220 HIK  222 (367)
Q Consensus       220 H~~  222 (367)
                      |++
T Consensus        94 H~~   96 (100)
T 2ebt_A           94 HMK   96 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.66  E-value=1.1e-16  Score=116.19  Aligned_cols=78  Identities=32%  Similarity=0.640  Sum_probs=39.1

Q ss_pred             ceeccc--cccccCCHHHHHHHHHHhCCCCCccCC--ccccccCChHHHHHHHHHHhccCCcccccccccccCCHHHHHH
Q psy2876         144 VHKCLY--CFKVFVHKAHLDKHLILHETSEMHNCD--FCHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKFINDLKLKA  219 (367)
Q Consensus       144 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f~~~~~l~~  219 (367)
                      +|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|++.|+++ ++|.|++|++.|.+...|..
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH-RPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCC-CCEECSSSSCEESSHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCC-CCccCCCCCcccCCHHHHHH
Confidence            344544  555555555555555555444555554  3555555555555555555444 44555555555555555555


Q ss_pred             HHH
Q psy2876         220 HIK  222 (367)
Q Consensus       220 H~~  222 (367)
                      |++
T Consensus        84 H~~   86 (89)
T 2wbs_A           84 HMK   86 (89)
T ss_dssp             HGG
T ss_pred             HHH
Confidence            544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.4e-16  Score=113.01  Aligned_cols=72  Identities=21%  Similarity=0.483  Sum_probs=64.3

Q ss_pred             CCCccccccc--cccccCCHHHHHHHHH-HhCCCccccccc--cccccCCHHHHHHHHHhcCCCCceeccccccccc
Q psy2876           1 MEKTLYKCLY--CHKVFKKSTSFDKHME-HHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFE   72 (367)
Q Consensus         1 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   72 (367)
                      +++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|++++||.|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4678899987  9999999999999998 788899999998  9999999999999999999999999999998884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=2.5e-16  Score=113.20  Aligned_cols=78  Identities=27%  Similarity=0.496  Sum_probs=64.0

Q ss_pred             cccc--cccccccCCHHHHHHHHHHhCCCccccccc--cccccCCHHHHHHHHHhcCCCCceeccc---ccccccCHHHH
Q psy2876           5 LYKC--LYCHKVFKKSTSFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKS---CGRRFESEELL   77 (367)
Q Consensus         5 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~L   77 (367)
                      ||+|  +.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6788  778888888888888888888888888877  88888888888888888876   88888   88888888888


Q ss_pred             HHHHHHhc
Q psy2876          78 IVHQVIHE   85 (367)
Q Consensus        78 ~~H~~~h~   85 (367)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88877653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.64  E-value=1.2e-16  Score=105.90  Aligned_cols=57  Identities=21%  Similarity=0.438  Sum_probs=42.1

Q ss_pred             CcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      ++||.|++|++.|...+.|..|+++|++++||.|++|++.|...+.|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            567777777777777777777777777777777777777777777777777777664

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=9.2e-16  Score=110.51  Aligned_cols=80  Identities=23%  Similarity=0.263  Sum_probs=65.3

Q ss_pred             hhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCC----CCccCCccccccCChHHHHHHHHHHhccCCcccccc
Q psy2876         131 HLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETS----EMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDI  206 (367)
Q Consensus       131 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~  206 (367)
                      .|..|+++|.++++|.|+.|++.|.....|..|++.|+..    ++|.|++|++.|.....|..|+++|+++ .++.|..
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~-~~~~~~~   80 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP-DGVEGEN   80 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC-CSCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC-CCcccCC
Confidence            4567888888888888888888888888888888777665    6788888888888888888888888887 7888888


Q ss_pred             ccccc
Q psy2876         207 CGEKF  211 (367)
Q Consensus       207 C~~~f  211 (367)
                      |+..|
T Consensus        81 ~~~~~   85 (86)
T 1x6h_A           81 SGPSS   85 (86)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            87765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=1.7e-15  Score=108.79  Aligned_cols=75  Identities=23%  Similarity=0.346  Sum_probs=49.7

Q ss_pred             ceec--cccccccCCHHHHHHHHHHhCCCCCccCCc--cccccCChHHHHHHHHHHhccCCcccccc---cccccCCHHH
Q psy2876         144 VHKC--LYCFKVFVHKAHLDKHLILHETSEMHNCDF--CHLTFTTDNDLIRHMRSHEEYHTKHTCDI---CGEKFINDLK  216 (367)
Q Consensus       144 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~C~~---C~~~f~~~~~  216 (367)
                      ||.|  +.|++.|.+...|..|+++|.++++|.|+.  |++.|.+...|..|+++|++    |.|+.   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~----~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG----YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS----EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC----CCCCCCCCCCCccCCHHH
Confidence            4566  666666666666666666666666666666  66666666666666666654    66666   6666666666


Q ss_pred             HHHHHH
Q psy2876         217 LKAHIK  222 (367)
Q Consensus       217 l~~H~~  222 (367)
                      |..|++
T Consensus        77 l~~H~~   82 (85)
T 2j7j_A           77 YLKHVA   82 (85)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            666666

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=2.3e-15  Score=106.54  Aligned_cols=70  Identities=23%  Similarity=0.473  Sum_probs=49.6

Q ss_pred             CCcceeccc--cccccCCHHHHHHHHH-HhCCCCCccCCc--cccccCChHHHHHHHHHHhccCCccccccccccc
Q psy2876         141 ESEVHKCLY--CFKVFVHKAHLDKHLI-LHETSEMHNCDF--CHLTFTTDNDLIRHMRSHEEYHTKHTCDICGEKF  211 (367)
Q Consensus       141 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C~~~f  211 (367)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+++ ++|.|++|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~-~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDT-RDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTS-CCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCC-CCeeCCCCCCCC
Confidence            455666665  7777777777777776 576777777776  777777777777777777766 677777777766

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1e-15  Score=113.17  Aligned_cols=69  Identities=23%  Similarity=0.322  Sum_probs=60.7

Q ss_pred             CCCccccccccccccCCHHHHHHHHH-Hh---CCCccccccccccccCCHHHHHHH-HHhcCCCCceecccccc
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHME-HH---NRNVLHKCHLCTKAYPSEKNLDRH-LLTHNVRRSFRCKSCGR   69 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~   69 (367)
                      +|++||.|++|++.|.....|..|++ .|   .+++||.|++|++.|.....|..| +++|++++||.|.++..
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            57899999999999999999999997 58   568899999999999999999999 78999999999987543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.2e-15  Score=107.50  Aligned_cols=63  Identities=30%  Similarity=0.453  Sum_probs=51.2

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      ++++|.|++|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            567888888888888888888888888888888888888888888888888888888888776

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=4.1e-15  Score=103.87  Aligned_cols=61  Identities=21%  Similarity=0.502  Sum_probs=49.9

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCce
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSF   62 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   62 (367)
                      ++++|+|+.|++.|.....|..|++.|+++++|.|++|++.|.....|..|+++|++++||
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            5678888888888888888888888888888888888888888888888888888877765

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=1.5e-15  Score=109.37  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=69.6

Q ss_pred             HHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCC----cceeccccccccCCHHHHHHHHHHhCCCCCccCCccc
Q psy2876         104 LKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDES----EVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCH  179 (367)
Q Consensus       104 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  179 (367)
                      |..|+++|.++++|.|+.|++.|.....|..|++.++..    ++|.|+.|++.|.....|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            456888888899999999999999999999998876655    6899999999999999999999999999999999998


Q ss_pred             ccc
Q psy2876         180 LTF  182 (367)
Q Consensus       180 ~~f  182 (367)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.56  E-value=9.4e-16  Score=119.58  Aligned_cols=109  Identities=15%  Similarity=0.183  Sum_probs=64.4

Q ss_pred             CCccccccccccccCCHHHHHHHHHHh---CCCccccccccccccC------CHHHHHHHHHhcCCCCceeccccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHH---NRNVLHKCHLCTKAYP------SEKNLDRHLLTHNVRRSFRCKSCGRRFE   72 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h---~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~   72 (367)
                      |.++|.|...+.....  .+..+.+.+   ..++.+.|++|++.|.      ....|..|+ .|++++||.|++|++.|.
T Consensus         9 ~~k~~~~~~k~~~~~~--s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~   85 (129)
T 2wbt_A            9 GSKKYLSNHKGIFIHV--TLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFS   85 (129)
T ss_dssp             TCCGGGGCSSCEEEEC--CHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEES
T ss_pred             cccccccccCCeeeee--cHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccC
Confidence            5677777665543321  233333222   2234566777665554      444444454 466666677777777776


Q ss_pred             CHHHHHHHHHHhcCccccccccccccCCHHHHHHHHHHccCC
Q psy2876          73 SEELLIVHQVIHERKFHKCTQCEESFKNKKHLKQHLLAHEKV  114 (367)
Q Consensus        73 ~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  114 (367)
                      ....|..|+++| +++|.|+.|++.|.....|..|+++|+++
T Consensus        86 ~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           86 SSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             SHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            666666666666 66666666666666666666666666654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.51  E-value=2.5e-15  Score=117.17  Aligned_cols=57  Identities=18%  Similarity=0.436  Sum_probs=28.0

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhc
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      |.+++||.|+.|++.|.....|..|+++|  ++||.|+.|++.|...+.|..|+++|++
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~  125 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHN  125 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence            33444444444444444444455555444  4445555555555555555555555444

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=1.5e-14  Score=95.34  Aligned_cols=56  Identities=27%  Similarity=0.549  Sum_probs=45.4

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   57 (367)
                      |++||+|++|++.|.+...|..|+++|+++++|.|++|++.|.....|..|++.|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            56788888888888888888888888888888888888888888888888888775

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.4e-14  Score=100.01  Aligned_cols=60  Identities=20%  Similarity=0.308  Sum_probs=43.7

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRS   61 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   61 (367)
                      +++||+|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|++.|++++|
T Consensus         6 ~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            566777777777777777777777777777777777777777777777777777766655

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=2.1e-14  Score=105.48  Aligned_cols=76  Identities=16%  Similarity=0.268  Sum_probs=57.4

Q ss_pred             cccCCHHHHHHHHHHhCCCcccccccccccc-CCHHHHHHHHHhcCCCCceecccccccccCHHHHHHH-HHHhcCccc
Q psy2876          13 KVFKKSTSFDKHMEHHNRNVLHKCHLCTKAY-PSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVH-QVIHERKFH   89 (367)
Q Consensus        13 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~   89 (367)
                      ..|.....|..|++.+.++++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| +++|..++|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            4566667777777777777778888888888 7778888888777 77777777777777777777777 777765544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=7e-15  Score=108.73  Aligned_cols=77  Identities=16%  Similarity=0.189  Sum_probs=53.7

Q ss_pred             ccCChhhhhhhhhccCCCcceeccccccccC-CHHHHHHHHHHhCC-CCCccCCccccccCChHHHHHHHHHHhccCCcc
Q psy2876         125 LFRHESHLQNHVIVHDESEVHKCLYCFKVFV-HKAHLDKHLILHET-SEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKH  202 (367)
Q Consensus       125 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  202 (367)
                      .+.....+..|+++|.++++|.|++|++.|. ....|..|+++|++ +++|.|++|++.|.....|..|+++|+++ +++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~-kp~   83 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSA-KPS   83 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCS-CSS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCC-CCC
Confidence            3444555666777777777777777777777 77777777777776 67777777777777777777777777766 543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.7e-14  Score=100.50  Aligned_cols=66  Identities=30%  Similarity=0.424  Sum_probs=42.1

Q ss_pred             ccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccc
Q psy2876         138 VHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTC  204 (367)
Q Consensus       138 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C  204 (367)
                      .+.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++ +||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~-~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS-GPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC-CCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC-CCCCC
Confidence            3445566666666666666666666666666666666666666666666666666666665 66655

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2.9e-14  Score=100.36  Aligned_cols=71  Identities=18%  Similarity=0.422  Sum_probs=59.8

Q ss_pred             hhhhhhhccCCCcceeccccccccCCHHHHHHHHH-HhCCC-CCccCCccccccCChHHHHHHHHHHhccCCc
Q psy2876         131 HLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLI-LHETS-EMHNCDFCHLTFTTDNDLIRHMRSHEEYHTK  201 (367)
Q Consensus       131 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  201 (367)
                      .|..|+++|.++++|.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.....|..|++.+++...|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            35678889999999999999999999999999987 56654 7899999999999999999999988776444

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=6.1e-14  Score=102.95  Aligned_cols=72  Identities=19%  Similarity=0.278  Sum_probs=48.8

Q ss_pred             ccCChhhhhhhhhccCCCcceecccccccc-CCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHH-HHHHhc
Q psy2876         125 LFRHESHLQNHVIVHDESEVHKCLYCFKVF-VHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRH-MRSHEE  197 (367)
Q Consensus       125 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  197 (367)
                      .|.....|..|++.+.++++|.|+.|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| +++|.+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            445556666666666666677777777777 6777777777777 66777777777777777777777 556554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=5.9e-14  Score=97.35  Aligned_cols=64  Identities=25%  Similarity=0.398  Sum_probs=56.5

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +.++|.++++|.|++|++.|.....|..|+++|.+++||.|++|++.|.....|..|+++|+++
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            4567788889999999999999999999999999999999999999999999999999998875

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.47  E-value=7.5e-14  Score=97.36  Aligned_cols=63  Identities=24%  Similarity=0.398  Sum_probs=46.0

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcc
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKH  202 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~  202 (367)
                      +.++++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++ +||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~-kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE-KPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS-CCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC-CCC
Confidence            455667777777777777777777777777777777777777777777777777777766 554

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=4.4e-14  Score=98.00  Aligned_cols=61  Identities=30%  Similarity=0.533  Sum_probs=42.2

Q ss_pred             HHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhcC
Q psy2876          26 EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHER   86 (367)
Q Consensus        26 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   86 (367)
                      ++|.++++|.|++|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|..
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            3566666777777777777777777777777767777777777777777777777766653

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=3.6e-14  Score=104.84  Aligned_cols=69  Identities=14%  Similarity=0.178  Sum_probs=51.6

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHH-Hh---CCCCCccCCccccccCChHHHHHH-HHHHhccCCcccccccc
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLI-LH---ETSEMHNCDFCHLTFTTDNDLIRH-MRSHEEYHTKHTCDICG  208 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~~C~~C~  208 (367)
                      ..|++||.|+.|++.|.....|..|++ .|   .+++||.|++|++.|...+.|..| +++|.++ +||.|.++.
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~   86 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVK   86 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCccc
Confidence            356777888888888888888888876 47   456778888888888888888888 6777776 778777654

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.3e-14  Score=107.29  Aligned_cols=80  Identities=24%  Similarity=0.311  Sum_probs=67.6

Q ss_pred             ccCCHHHHHHHHHHccCCcceeCCCCCCccC-ChhhhhhhhhccCC-CcceeccccccccCCHHHHHHHHHHhCCCCCcc
Q psy2876          97 SFKNKKHLKQHLLAHEKVKVFHCPKCPKLFR-HESHLQNHVIVHDE-SEVHKCLYCFKVFVHKAHLDKHLILHETSEMHN  174 (367)
Q Consensus        97 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  174 (367)
                      .+.....+..|+++|.++++|.|+.|++.|. ....|..|+++|++ +++|.|++|++.|.....|..|++.|++++|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3455566778888888889999999999998 89999999998888 889999999999999999999999998888765


Q ss_pred             CC
Q psy2876         175 CD  176 (367)
Q Consensus       175 C~  176 (367)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.45  E-value=1.1e-13  Score=91.20  Aligned_cols=56  Identities=23%  Similarity=0.488  Sum_probs=49.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      ||.|++|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68899999999999999999988888888999999999988888999988887764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.44  E-value=8e-14  Score=99.31  Aligned_cols=54  Identities=28%  Similarity=0.487  Sum_probs=30.4

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHH
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQ   81 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   81 (367)
                      +.+.++|.|++|++.|.+...|.+|+++|++++||.|++|++.|.....|..|+
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            334445555555555555555555555555555555555555555555555554

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.3e-13  Score=94.95  Aligned_cols=63  Identities=22%  Similarity=0.385  Sum_probs=50.6

Q ss_pred             ccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCc
Q psy2876         138 VHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTK  201 (367)
Q Consensus       138 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  201 (367)
                      .+.++++|.|+.|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++ ++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~-~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD-MS   65 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS-SC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC-CC
Confidence            3566778888888888888888888888888888888888888888888888888888876 44

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.42  E-value=1.4e-13  Score=90.61  Aligned_cols=55  Identities=29%  Similarity=0.562  Sum_probs=30.1

Q ss_pred             CcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHh
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHE  196 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  196 (367)
                      +++|.|+.|++.|.+...|..|+++|.+++||.|++|++.|.....|..|++.|+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            3455555555555555555555555555555555555555555555555555554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=93.00  Aligned_cols=61  Identities=20%  Similarity=0.572  Sum_probs=44.4

Q ss_pred             hccCCCcceeccccccccCCHHHHHHHHHH-h-CCCCCccCCccccccCChHHHHHHHHHHhc
Q psy2876         137 IVHDESEVHKCLYCFKVFVHKAHLDKHLIL-H-ETSEMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       137 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      ++|.++++|.|+.|++.|.+...|..|++. | .+++||.|+.|++.|.+.+.|..|++.+++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            356667777777777777777777777776 5 467777777777777777777777777664

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=1.7e-13  Score=97.53  Aligned_cols=63  Identities=27%  Similarity=0.555  Sum_probs=51.6

Q ss_pred             hhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHH-HHhcc
Q psy2876         136 VIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMR-SHEEY  198 (367)
Q Consensus       136 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~  198 (367)
                      +..+.+.++|.|++|++.|.+...|..|+++|++++||.|++|++.|.....|.+|++ .|.++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3456667788899999999988889999888888888999889999988888988875 45544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.5e-13  Score=93.41  Aligned_cols=57  Identities=23%  Similarity=0.533  Sum_probs=28.1

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHh-c-CCCCceecccccccccCHHHHHHHHHHh
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLT-H-NVRRSFRCKSCGRRFESEELLIVHQVIH   84 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h   84 (367)
                      |.++++|.|+.|++.|.+...|..|++. | .++++|.|+.|++.|.+...|..|++.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~   63 (66)
T 2drp_A            5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII   63 (66)
T ss_dssp             EEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHH
Confidence            4444455555555555555555555544 3 2444555555555555555555554443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=7.9e-14  Score=98.06  Aligned_cols=67  Identities=22%  Similarity=0.394  Sum_probs=49.8

Q ss_pred             HHHHHHHhCCCCCccCCccccccCChHHHHHHHHH-HhccCCcccccccccccCCHHHHHHHHHhcCC
Q psy2876         160 LDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRS-HEEYHTKHTCDICGEKFINDLKLKAHIKIIHN  226 (367)
Q Consensus       160 l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  226 (367)
                      |..|+++|.+++||.|++|++.|.+...|..|++. |.++.++|.|++|++.|.....|..|++..|.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            34577788888888888888888888888888874 44333677888787777777777777775454

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.4e-13  Score=89.25  Aligned_cols=56  Identities=23%  Similarity=0.530  Sum_probs=45.7

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHH-HhcCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHL-LTHNVR   59 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~   59 (367)
                      +||+|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            57888888888888888888888888888888888888888888888886 556543

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.37  E-value=4.7e-13  Score=88.04  Aligned_cols=55  Identities=25%  Similarity=0.493  Sum_probs=39.2

Q ss_pred             ceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         144 VHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      ||.|+.|++.|.+...|..|+++|.+++||.|+.|++.|.+...|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            4667777777777777777777777777777777777777777777777776655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.6e-13  Score=94.90  Aligned_cols=62  Identities=16%  Similarity=0.335  Sum_probs=45.9

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCC---CccccccccccccCCHHHHHHHHH-hcCCCCce
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNR---NVLHKCHLCTKAYPSEKNLDRHLL-THNVRRSF   62 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~   62 (367)
                      ++++||+|++|++.|.....|..|+++|.+   +++|.|++|++.|.....|..|++ .|.++.+.
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            467788888888888888888888887775   677888888888888888888874 45555443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=3.8e-15  Score=103.63  Aligned_cols=70  Identities=13%  Similarity=0.234  Sum_probs=42.9

Q ss_pred             hhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         130 SHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       130 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      ..|..|+++|.++++|.|+.|++.|.....|..       +++|.|+.|++.|.....|..|+++|+++ ++|.|++|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~-~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGK-KTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCC-CCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCC-CCCCCCCC
Confidence            345566666666666666666666665555443       45666666666666666666666666655 66666655

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=1.3e-12  Score=91.96  Aligned_cols=58  Identities=22%  Similarity=0.346  Sum_probs=33.6

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCC---CCCccCCccccccCChHHHHHHHHHHh
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHET---SEMHNCDFCHLTFTTDNDLIRHMRSHE  196 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~~h~  196 (367)
                      |.++++|.|++|++.|.....|..|+++|.+   +++|.|++|++.|.....|..|++.++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            4455556666666666666666666665553   555666666666666666666654433

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.8e-15  Score=103.64  Aligned_cols=70  Identities=19%  Similarity=0.179  Sum_probs=62.2

Q ss_pred             HHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         102 KHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       102 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      ..|..|+++|.++++|.|+.|++.|.+...|..       +++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            456778888999999999999999998888876       6789999999999999999999999999999999887

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.4e-12  Score=94.27  Aligned_cols=61  Identities=16%  Similarity=0.215  Sum_probs=46.9

Q ss_pred             cccccccccccCCHHHHHHHHHH-hCCCcc--------ccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEH-HNRNVL--------HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      .|.|+.|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            36677888888888888888876 777666        77777777777777777777777777777775

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.7e-12  Score=90.07  Aligned_cols=58  Identities=24%  Similarity=0.534  Sum_probs=40.7

Q ss_pred             HhCCCcccccc--ccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHh
Q psy2876          27 HHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH   84 (367)
Q Consensus        27 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h   84 (367)
                      .+.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            45566677775  47777777777777777777777777777777777777777776665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.6e-12  Score=88.33  Aligned_cols=58  Identities=21%  Similarity=0.321  Sum_probs=43.4

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCcccccc-ccccccCCHHHHHHHHHhcCCCCc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCH-LCTKAYPSEKNLDRHLLTHNVRRS   61 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~   61 (367)
                      +++||+|++|++.|. ...|..|+++ ++++||.|+ .|++.|...+.|..|+++|....+
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            467777777777777 7777777777 777777777 777777777777777777765443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.27  E-value=4.2e-12  Score=84.39  Aligned_cols=49  Identities=31%  Similarity=0.633  Sum_probs=26.5

Q ss_pred             ceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHH
Q psy2876         144 VHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHM  192 (367)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  192 (367)
                      ||.|+.|++.|.+...|..|+++|.+++||.|+.|++.|.+...|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555555555555555555555555555554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.24  E-value=1.5e-11  Score=90.03  Aligned_cols=61  Identities=18%  Similarity=0.278  Sum_probs=54.3

Q ss_pred             ceeccccccccCCHHHHHHHHHH-hCCCCC--------ccCCccccccCChHHHHHHHHHHhccCCccccc
Q psy2876         144 VHKCLYCFKVFVHKAHLDKHLIL-HETSEM--------HNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCD  205 (367)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~  205 (367)
                      .++|+.|++.|.....|..|++. |.++++        |.|+.|++.|.....|..|+++|+++ ++|.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~-k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE-KSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTC-CCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCC-CCCCCC
Confidence            46799999999999999999987 888777        89999999999999999999999988 899986

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.9e-12  Score=87.29  Aligned_cols=58  Identities=24%  Similarity=0.544  Sum_probs=38.9

Q ss_pred             ccCCCcceecc--ccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHH
Q psy2876         138 VHDESEVHKCL--YCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       138 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      ++.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|...+.|..|+++|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            35566667775  47777777777777776666666677777777777766676666654

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.15  E-value=2.7e-11  Score=83.62  Aligned_cols=53  Identities=25%  Similarity=0.469  Sum_probs=27.7

Q ss_pred             Cccccccc--cccccCCHHHHHHHHHHhCCCccccccc--cccccCCHHHHHHHHHh
Q psy2876           3 KTLYKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLT   55 (367)
Q Consensus         3 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~   55 (367)
                      .++|.|..  |++.|.....|..|++.|+++++|.|++  |++.|.....|..|+++
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~   71 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT   71 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTT
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhc
Confidence            34455554  5555555555555555555555555533  55555555555555443

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.5e-11  Score=75.08  Aligned_cols=45  Identities=24%  Similarity=0.280  Sum_probs=33.2

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777766

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.13  E-value=3.7e-11  Score=75.02  Aligned_cols=45  Identities=18%  Similarity=0.175  Sum_probs=29.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=75.13  Aligned_cols=45  Identities=18%  Similarity=0.206  Sum_probs=35.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            467777777778888888888888888888888877777877776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=75.10  Aligned_cols=45  Identities=18%  Similarity=0.267  Sum_probs=30.5

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            456666666667777777777777777777666666666666665

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.8e-11  Score=74.94  Aligned_cols=45  Identities=18%  Similarity=0.104  Sum_probs=32.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.3e-11  Score=82.52  Aligned_cols=56  Identities=21%  Similarity=0.368  Sum_probs=38.8

Q ss_pred             CCcceeccccccccCCHHHHHHHHHHhCCCCCccCC-ccccccCChHHHHHHHHHHhcc
Q psy2876         141 ESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD-FCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       141 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +++||.|+.|++.|. ...|..|+++ .+++||.|+ .|++.|...+.|..|+++|.+.
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            456677777777777 7777777766 667777777 7777777777777777666543

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=75.04  Aligned_cols=45  Identities=18%  Similarity=0.194  Sum_probs=33.8

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777765

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.9e-11  Score=75.50  Aligned_cols=45  Identities=20%  Similarity=0.115  Sum_probs=30.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|...+.|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            456666666666666666666666666666666666666666665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.2e-11  Score=74.78  Aligned_cols=45  Identities=18%  Similarity=0.158  Sum_probs=33.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.1e-11  Score=74.78  Aligned_cols=45  Identities=20%  Similarity=0.139  Sum_probs=29.5

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=4.1e-11  Score=74.02  Aligned_cols=44  Identities=18%  Similarity=0.118  Sum_probs=28.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.8e-11  Score=74.95  Aligned_cols=45  Identities=20%  Similarity=0.146  Sum_probs=30.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.4e-11  Score=76.91  Aligned_cols=44  Identities=18%  Similarity=0.199  Sum_probs=35.7

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.7e-11  Score=74.98  Aligned_cols=45  Identities=22%  Similarity=0.242  Sum_probs=34.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.3e-11  Score=74.70  Aligned_cols=45  Identities=22%  Similarity=0.264  Sum_probs=31.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            466667777777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.7e-11  Score=75.02  Aligned_cols=45  Identities=16%  Similarity=0.124  Sum_probs=29.8

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.7e-11  Score=74.54  Aligned_cols=45  Identities=20%  Similarity=0.208  Sum_probs=32.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.1e-11  Score=74.81  Aligned_cols=45  Identities=20%  Similarity=0.175  Sum_probs=33.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.12  E-value=4e-11  Score=77.73  Aligned_cols=44  Identities=18%  Similarity=0.384  Sum_probs=21.9

Q ss_pred             CCCccccccccccccCCHHHHHHHHH-hcCCCCceeccccccccc
Q psy2876          29 NRNVLHKCHLCTKAYPSEKNLDRHLL-THNVRRSFRCKSCGRRFE   72 (367)
Q Consensus        29 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~   72 (367)
                      .++++|.|++|++.|.....|..|++ +|.+++||.|++|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34444555555555555555555543 454555555555555544

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.6e-11  Score=75.09  Aligned_cols=45  Identities=22%  Similarity=0.245  Sum_probs=31.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            356666667777777777777777777777777777777777665

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=1.2e-11  Score=76.57  Aligned_cols=44  Identities=23%  Similarity=0.228  Sum_probs=30.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566667777777777777777777777777777777777665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.12  E-value=3.2e-11  Score=75.26  Aligned_cols=45  Identities=18%  Similarity=0.084  Sum_probs=34.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.7e-11  Score=75.00  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=34.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.11  E-value=4.3e-11  Score=74.73  Aligned_cols=45  Identities=20%  Similarity=0.216  Sum_probs=32.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777765

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.9e-11  Score=74.89  Aligned_cols=45  Identities=22%  Similarity=0.231  Sum_probs=34.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|...+.|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            466777777777777787777777777777777777777777776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.11  E-value=3.6e-11  Score=75.07  Aligned_cols=45  Identities=16%  Similarity=0.098  Sum_probs=29.4

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            355666666666666666666666666666666666666666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4e-11  Score=74.83  Aligned_cols=45  Identities=22%  Similarity=0.293  Sum_probs=33.8

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777766

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=76.96  Aligned_cols=45  Identities=18%  Similarity=0.257  Sum_probs=35.9

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366677788888888888888888888888888888888888776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4e-11  Score=74.86  Aligned_cols=45  Identities=18%  Similarity=0.173  Sum_probs=29.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.4e-11  Score=76.94  Aligned_cols=44  Identities=20%  Similarity=0.234  Sum_probs=36.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            66778888888888888888888888888888888888888776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.11  E-value=1.6e-11  Score=76.69  Aligned_cols=45  Identities=18%  Similarity=0.199  Sum_probs=34.3

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356677777777888888888777778778777777777777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.3e-11  Score=74.70  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=35.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777778888888888888888888877777777877776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=1.6e-11  Score=76.70  Aligned_cols=44  Identities=18%  Similarity=0.203  Sum_probs=36.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      ||++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888888888888888888888888888888888888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-11  Score=76.97  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.5e-11  Score=76.77  Aligned_cols=44  Identities=18%  Similarity=0.205  Sum_probs=35.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66677788888888888888888888888888888888888776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.7e-11  Score=76.54  Aligned_cols=44  Identities=20%  Similarity=0.366  Sum_probs=34.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777788888888888888888888888888888887776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.3e-11  Score=77.09  Aligned_cols=44  Identities=18%  Similarity=0.215  Sum_probs=35.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=76.42  Aligned_cols=45  Identities=20%  Similarity=0.169  Sum_probs=34.5

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            356677777778888888888888888888777777777777766

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.4e-11  Score=76.98  Aligned_cols=44  Identities=20%  Similarity=0.232  Sum_probs=35.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            66677788888888888888888888888888888888888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.8e-11  Score=74.49  Aligned_cols=45  Identities=18%  Similarity=0.199  Sum_probs=33.4

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777765

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=76.47  Aligned_cols=45  Identities=16%  Similarity=0.233  Sum_probs=36.2

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777888888888888888888888888888888888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=2e-11  Score=76.26  Aligned_cols=45  Identities=20%  Similarity=0.195  Sum_probs=35.8

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777888888888888888888888888888888888888765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.10  E-value=1.5e-11  Score=76.82  Aligned_cols=45  Identities=16%  Similarity=0.143  Sum_probs=36.4

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            366778888888888888888888888888888888888888776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.5e-11  Score=74.61  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=30.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            356666666666666666666666666666666666666666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.7e-11  Score=74.50  Aligned_cols=45  Identities=18%  Similarity=0.121  Sum_probs=34.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777787777777777777777777777777766

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.10  E-value=1.4e-11  Score=76.97  Aligned_cols=44  Identities=18%  Similarity=0.197  Sum_probs=33.9

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777777888888888777777778777777777777766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.7e-11  Score=74.13  Aligned_cols=45  Identities=18%  Similarity=0.115  Sum_probs=34.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777778888888888888888888878877777877776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4e-11  Score=74.86  Aligned_cols=45  Identities=20%  Similarity=0.146  Sum_probs=31.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466666677777777777777777777777777777777777665

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=76.31  Aligned_cols=45  Identities=20%  Similarity=0.190  Sum_probs=36.3

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=76.35  Aligned_cols=44  Identities=23%  Similarity=0.204  Sum_probs=35.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677888888888888888888888888888888888888776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=76.48  Aligned_cols=45  Identities=22%  Similarity=0.260  Sum_probs=37.2

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.9e-11  Score=76.40  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=36.8

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=74.55  Aligned_cols=45  Identities=18%  Similarity=0.189  Sum_probs=29.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355666666666666666666666666666666666666666655

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.09  E-value=1.5e-11  Score=76.81  Aligned_cols=45  Identities=16%  Similarity=0.118  Sum_probs=36.7

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.09  E-value=1.7e-11  Score=76.64  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=34.7

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66677777888888888888888888888888888888887766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=76.65  Aligned_cols=44  Identities=25%  Similarity=0.329  Sum_probs=35.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=76.43  Aligned_cols=44  Identities=25%  Similarity=0.231  Sum_probs=35.0

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=76.62  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=33.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.5e-11  Score=76.81  Aligned_cols=44  Identities=18%  Similarity=0.328  Sum_probs=35.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66677778888888888888888888888888888888888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.7e-11  Score=74.15  Aligned_cols=44  Identities=16%  Similarity=0.198  Sum_probs=29.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=5.8e-11  Score=74.10  Aligned_cols=45  Identities=18%  Similarity=0.171  Sum_probs=32.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.3e-11  Score=73.95  Aligned_cols=44  Identities=18%  Similarity=0.092  Sum_probs=30.1

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55666666667777777777777777777666666666666665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.09  E-value=5.5e-11  Score=74.21  Aligned_cols=45  Identities=18%  Similarity=0.101  Sum_probs=32.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.7e-11  Score=76.61  Aligned_cols=44  Identities=23%  Similarity=0.226  Sum_probs=32.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=1.8e-11  Score=76.53  Aligned_cols=44  Identities=18%  Similarity=0.240  Sum_probs=34.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777888888888888888888888888888888888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=1.9e-11  Score=76.36  Aligned_cols=44  Identities=23%  Similarity=0.231  Sum_probs=32.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.9e-11  Score=74.07  Aligned_cols=44  Identities=18%  Similarity=0.134  Sum_probs=28.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666655

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.08  E-value=4.8e-11  Score=74.51  Aligned_cols=44  Identities=20%  Similarity=0.212  Sum_probs=23.3

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.9e-11  Score=74.07  Aligned_cols=45  Identities=20%  Similarity=0.134  Sum_probs=36.2

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            467777888888888888888888888888888888888888776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=8.3e-11  Score=73.38  Aligned_cols=45  Identities=18%  Similarity=0.247  Sum_probs=32.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=8.2e-11  Score=73.40  Aligned_cols=45  Identities=16%  Similarity=0.070  Sum_probs=32.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356667777777777777777777777777777777777777766

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.08  E-value=1.9e-11  Score=76.32  Aligned_cols=44  Identities=16%  Similarity=0.142  Sum_probs=35.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66677888888888888888888888888888888888888776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.4e-11  Score=75.86  Aligned_cols=44  Identities=16%  Similarity=0.175  Sum_probs=33.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|++.|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.1e-11  Score=76.19  Aligned_cols=45  Identities=18%  Similarity=0.228  Sum_probs=36.0

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366777888888888888888888888888888888888888776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2e-11  Score=76.24  Aligned_cols=45  Identities=22%  Similarity=0.136  Sum_probs=35.3

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            356677778888888888888888888888888888888888776

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.7e-11  Score=73.84  Aligned_cols=44  Identities=18%  Similarity=0.160  Sum_probs=24.0

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.9e-11  Score=74.91  Aligned_cols=44  Identities=23%  Similarity=0.254  Sum_probs=25.9

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55555555556666666666665566666555555555555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2e-11  Score=76.22  Aligned_cols=44  Identities=18%  Similarity=0.140  Sum_probs=35.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=2.5e-11  Score=75.81  Aligned_cols=44  Identities=18%  Similarity=0.212  Sum_probs=32.7

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777765

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.9e-11  Score=76.42  Aligned_cols=44  Identities=30%  Similarity=0.292  Sum_probs=34.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            56677777788888888888888888888888877788877776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=8.7e-11  Score=73.28  Aligned_cols=44  Identities=20%  Similarity=0.120  Sum_probs=32.1

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777665

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=75.14  Aligned_cols=45  Identities=13%  Similarity=0.050  Sum_probs=42.3

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      .|+++|.+++||.|++|++.|...+.|..|+++|+++ ++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE-KPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCC-SCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCC-CCCCCCCC
Confidence            4778899999999999999999999999999999998 99999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.8e-11  Score=73.50  Aligned_cols=45  Identities=16%  Similarity=0.175  Sum_probs=32.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466677777777777777777777777777777777777777654

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=74.61  Aligned_cols=44  Identities=14%  Similarity=0.086  Sum_probs=41.6

Q ss_pred             HHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         163 HLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       163 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      |+++|.+++||.|++|++.|.+.+.|..|+++|+++ ++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQ-RPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSC-CCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCC-CCCCCCCC
Confidence            677899999999999999999999999999999998 99999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.07  E-value=3e-11  Score=75.44  Aligned_cols=44  Identities=18%  Similarity=0.150  Sum_probs=34.0

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45667777778888888888888888888877777777777766

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.5e-11  Score=75.10  Aligned_cols=45  Identities=18%  Similarity=0.191  Sum_probs=42.2

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      +|+++|.+++||.|++|++.|...+.|..|+++|.++ ++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~-k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE-KPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCS-SCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCC-CCCCCCCC
Confidence            4778899999999999999999999999999999998 99999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=2.2e-11  Score=76.07  Aligned_cols=44  Identities=18%  Similarity=0.194  Sum_probs=30.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            45566677777777777777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.6e-11  Score=75.07  Aligned_cols=45  Identities=16%  Similarity=0.175  Sum_probs=42.2

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      .|+++|.+++||.|++|++.|.+.+.|..|+++|+++ ++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~-k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE-KSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHST-TSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCC-CCCCCCCC
Confidence            4778899999999999999999999999999999988 99999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=9.5e-11  Score=73.12  Aligned_cols=44  Identities=18%  Similarity=0.201  Sum_probs=29.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.9e-11  Score=74.90  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=28.5

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|++|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355566666666666666666666666666666666666666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.2e-11  Score=75.28  Aligned_cols=45  Identities=20%  Similarity=0.201  Sum_probs=36.2

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366778888888888888888888888888888888888888764

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.6e-11  Score=75.76  Aligned_cols=44  Identities=23%  Similarity=0.201  Sum_probs=30.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      ||++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45566666777777777777777777777777776777776665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.6e-11  Score=76.73  Aligned_cols=45  Identities=20%  Similarity=0.234  Sum_probs=35.9

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677788888888888888888888888888888888888776

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=1.2e-10  Score=73.04  Aligned_cols=45  Identities=16%  Similarity=0.202  Sum_probs=30.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHH-HhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLI-LHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|++ +|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            35666666666777777777776666777766 6666666666665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=75.10  Aligned_cols=45  Identities=20%  Similarity=0.196  Sum_probs=42.2

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      .|+++|.+++||.|++|++.|...+.|..|+++|+++ ++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGG-KPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSC-CCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCC-CCCCCCCC
Confidence            3678899999999999999999999999999999998 99999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=2.1e-10  Score=74.25  Aligned_cols=47  Identities=21%  Similarity=0.349  Sum_probs=33.1

Q ss_pred             ccCCCcceeccccccccCCHHHHHHHHH-HhCCCCCccCCccccccCC
Q psy2876         138 VHDESEVHKCLYCFKVFVHKAHLDKHLI-LHETSEMHNCDFCHLTFTT  184 (367)
Q Consensus       138 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  184 (367)
                      .+.++++|.|+.|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3556667777777777777777777775 6777777777777777764

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.5e-10  Score=71.88  Aligned_cols=38  Identities=21%  Similarity=0.383  Sum_probs=19.2

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCcccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLC   39 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   39 (367)
                      +++||+|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            7 GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             SCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            34455555555555555555555555555555555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.3e-11  Score=75.07  Aligned_cols=44  Identities=20%  Similarity=0.180  Sum_probs=35.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHH-hcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLL-THNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|++ +|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5667778888888888888888888888887 7888888888776

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.03  E-value=1.8e-10  Score=79.43  Aligned_cols=57  Identities=33%  Similarity=0.588  Sum_probs=47.1

Q ss_pred             hCCCccccccc--cccccCCHHHHHHHHHhcCCCCceeccc--ccccccCHHHHHHHHHHh
Q psy2876          28 HNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRRSFRCKS--CGRRFESEELLIVHQVIH   84 (367)
Q Consensus        28 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h   84 (367)
                      ..+.++|.|..  |++.|.....|..|++.|+++++|.|++  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567888888  9999988888999988888888888864  888888888888887654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.8e-10  Score=71.82  Aligned_cols=45  Identities=22%  Similarity=0.260  Sum_probs=32.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366667777777777777777777777777777777777777654

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.1e-10  Score=73.63  Aligned_cols=40  Identities=20%  Similarity=0.470  Sum_probs=20.5

Q ss_pred             CCCccccccccccccCCHHHHHHHHHhcCCCCceeccccc
Q psy2876          29 NRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCG   68 (367)
Q Consensus        29 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   68 (367)
                      .++++|.|++|++.|.....|..|+++|++++||.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3444555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=5.6e-11  Score=74.20  Aligned_cols=44  Identities=23%  Similarity=0.269  Sum_probs=31.9

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55667777777777777777777777777777777777777654

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.99  E-value=3.2e-10  Score=70.62  Aligned_cols=43  Identities=16%  Similarity=0.199  Sum_probs=30.5

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3666677777777777777777777777777777777777765

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.98  E-value=3.4e-10  Score=68.96  Aligned_cols=42  Identities=19%  Similarity=0.152  Sum_probs=29.2

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666677777777777777777777777777777777663

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.98  E-value=9.7e-11  Score=71.47  Aligned_cols=42  Identities=19%  Similarity=0.198  Sum_probs=31.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455677777777777777777777777777777777777764

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.98  E-value=6.7e-11  Score=76.63  Aligned_cols=52  Identities=19%  Similarity=0.261  Sum_probs=44.6

Q ss_pred             ccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCcee
Q psy2876          12 HKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFR   63 (367)
Q Consensus        12 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   63 (367)
                      ++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4667788888889999999999999999999999999999999998888763

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.98  E-value=4.6e-11  Score=79.86  Aligned_cols=54  Identities=17%  Similarity=0.396  Sum_probs=42.7

Q ss_pred             hhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHH
Q psy2876         132 LQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDL  188 (367)
Q Consensus       132 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  188 (367)
                      |..|+++|.+++||.|+.|++.|.....|.   ++|.+++||.|+.|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            566788888888888888888888877775   678888888888888888766543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.5e-10  Score=70.41  Aligned_cols=43  Identities=19%  Similarity=0.171  Sum_probs=30.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4666677777777777777777777777777777777777765

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=3.9e-10  Score=70.25  Aligned_cols=44  Identities=23%  Similarity=0.274  Sum_probs=31.8

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDF  177 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  177 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46667777777777777777777777777777777777777753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=70.77  Aligned_cols=42  Identities=14%  Similarity=0.255  Sum_probs=30.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455677777777777777777777777777777777777663

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=4e-10  Score=70.17  Aligned_cols=43  Identities=19%  Similarity=0.146  Sum_probs=30.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3666677777777777777777777777777777777777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=72.58  Aligned_cols=43  Identities=21%  Similarity=0.236  Sum_probs=35.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888764

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.4e-10  Score=70.51  Aligned_cols=44  Identities=18%  Similarity=0.155  Sum_probs=32.9

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDF  177 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  177 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46677777777777777777777777777777777777777753

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.3e-10  Score=70.58  Aligned_cols=43  Identities=23%  Similarity=0.274  Sum_probs=28.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3566666666666666666666666666666666666666665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.1e-10  Score=69.33  Aligned_cols=43  Identities=19%  Similarity=0.162  Sum_probs=31.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4666777777777777777777777777777777777777763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.2e-10  Score=72.62  Aligned_cols=43  Identities=19%  Similarity=0.186  Sum_probs=31.9

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.1e-10  Score=70.12  Aligned_cols=43  Identities=19%  Similarity=0.241  Sum_probs=29.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566666666666766777676666666676666666666665

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.9e-10  Score=70.22  Aligned_cols=44  Identities=18%  Similarity=0.152  Sum_probs=31.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDF  177 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  177 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46667777777777777777777777777777777777777753

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.96  E-value=1.1e-10  Score=72.80  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=31.7

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.2e-10  Score=68.13  Aligned_cols=41  Identities=15%  Similarity=0.199  Sum_probs=24.1

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.+++||.|+.|++.|...+.|..|+++|.+++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34455555566666666666666666666666665555555

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.5e-10  Score=72.14  Aligned_cols=44  Identities=16%  Similarity=0.159  Sum_probs=35.4

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      +|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888763

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=72.49  Aligned_cols=43  Identities=23%  Similarity=0.268  Sum_probs=32.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.1e-10  Score=70.09  Aligned_cols=42  Identities=19%  Similarity=0.291  Sum_probs=27.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            556666666666666666666666666666666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.7e-10  Score=69.86  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=33.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777777777777777777777777777777777777775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=72.55  Aligned_cols=43  Identities=19%  Similarity=0.189  Sum_probs=34.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667788888888888888888888888888888888887763

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=72.10  Aligned_cols=43  Identities=19%  Similarity=0.264  Sum_probs=35.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888864

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4e-10  Score=70.15  Aligned_cols=44  Identities=20%  Similarity=0.269  Sum_probs=33.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCc
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDF  177 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  177 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46677777777777777777777777777777777777777753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=72.26  Aligned_cols=43  Identities=21%  Similarity=0.192  Sum_probs=34.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667778888888888888888888888888888888888763

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=72.41  Aligned_cols=43  Identities=21%  Similarity=0.256  Sum_probs=35.0

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            5667888888888888888888888888888888888888763

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=70.30  Aligned_cols=43  Identities=16%  Similarity=0.215  Sum_probs=28.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566666666666666666666666666666666666666664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.3e-10  Score=72.43  Aligned_cols=43  Identities=21%  Similarity=0.329  Sum_probs=32.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5666777777777777777777777777777777777777753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.3e-10  Score=70.03  Aligned_cols=43  Identities=23%  Similarity=0.241  Sum_probs=30.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3666667777777777777777777777777777777777765

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=72.38  Aligned_cols=44  Identities=20%  Similarity=0.269  Sum_probs=35.6

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888764

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=72.23  Aligned_cols=43  Identities=23%  Similarity=0.264  Sum_probs=34.3

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5667778888888888888888888888888888888887764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.2e-10  Score=69.63  Aligned_cols=43  Identities=19%  Similarity=0.245  Sum_probs=32.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4667777777777777777777777777777777777777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.3e-10  Score=70.04  Aligned_cols=43  Identities=19%  Similarity=0.259  Sum_probs=29.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3566666666677777777777777777776666666666664

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3.8e-10  Score=70.31  Aligned_cols=43  Identities=23%  Similarity=0.294  Sum_probs=28.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            3556666666666666666666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.6e-10  Score=72.09  Aligned_cols=43  Identities=19%  Similarity=0.201  Sum_probs=33.9

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            5667778888888888888888888888888888888887753

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.1e-10  Score=69.71  Aligned_cols=43  Identities=21%  Similarity=0.189  Sum_probs=31.1

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.+++||.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4666777777777777777777777777777777777777765

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.6e-10  Score=69.53  Aligned_cols=42  Identities=19%  Similarity=0.258  Sum_probs=26.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555566666666666666666666666666666666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=71.74  Aligned_cols=42  Identities=19%  Similarity=0.226  Sum_probs=32.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777888888888888888888888888877877775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.5e-10  Score=69.91  Aligned_cols=43  Identities=21%  Similarity=0.260  Sum_probs=32.7

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4667777777777777777777777777777777777777775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.5e-10  Score=69.98  Aligned_cols=43  Identities=21%  Similarity=0.237  Sum_probs=29.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3566666666667777777776666666676666666666665

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.8e-10  Score=71.86  Aligned_cols=43  Identities=21%  Similarity=0.291  Sum_probs=32.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667777777888888888888888888877777777777753

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=4.7e-10  Score=69.85  Aligned_cols=43  Identities=19%  Similarity=0.146  Sum_probs=29.0

Q ss_pred             hhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         136 VIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       136 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      +++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3456666667777777777777777777766766667766665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.25  Aligned_cols=42  Identities=19%  Similarity=0.251  Sum_probs=30.4

Q ss_pred             HHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          26 EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        26 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      ++|+++++|.|++|++.|.....|..|++.|++++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            456677777777777777777777777777777777777765

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.94  E-value=1.7e-11  Score=82.03  Aligned_cols=54  Identities=19%  Similarity=0.455  Sum_probs=42.5

Q ss_pred             HHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHH
Q psy2876          21 FDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELL   77 (367)
Q Consensus        21 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L   77 (367)
                      |..|+++|++++||.|+.|++.|.....|.   +.|.+++||.|+.|++.|.....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            345777888888888888888888877775   678888888888888888765543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.4e-10  Score=72.27  Aligned_cols=43  Identities=23%  Similarity=0.285  Sum_probs=34.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      ||++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5667778888888888888888888888888888888888763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.8e-10  Score=70.99  Aligned_cols=43  Identities=21%  Similarity=0.240  Sum_probs=33.4

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3666777788888888888888888888888888888887774

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=72.01  Aligned_cols=44  Identities=16%  Similarity=0.240  Sum_probs=34.9

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      +|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36667788888888888888888888888888888888887763

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=71.44  Aligned_cols=42  Identities=17%  Similarity=0.197  Sum_probs=33.7

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            667778888888888888888888888888888888888774

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.5e-10  Score=72.19  Aligned_cols=43  Identities=19%  Similarity=0.240  Sum_probs=34.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            6667778888888888888888888888888888888887764

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.6e-10  Score=72.06  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=34.9

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36667788888888888888888888888888888888888763

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.94  E-value=5.3e-10  Score=72.32  Aligned_cols=51  Identities=18%  Similarity=0.294  Sum_probs=38.1

Q ss_pred             CCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCc
Q psy2876         123 PKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMH  173 (367)
Q Consensus       123 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  173 (367)
                      ++.|.....|..|+++|.++++|.|+.|++.|...+.|..|+++|++++||
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            355666777777777777777777777777777777777777777777766

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=4.8e-10  Score=69.83  Aligned_cols=43  Identities=19%  Similarity=0.244  Sum_probs=29.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3566666666777777777777777777777777666666664

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=7.7e-10  Score=68.52  Aligned_cols=41  Identities=17%  Similarity=0.167  Sum_probs=22.5

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccc
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCH  179 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  179 (367)
                      |.++++|.|+.|++.|.....|..|+++|.++++|.|+.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44555555555555555555555555555555555555553

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.9e-10  Score=69.00  Aligned_cols=43  Identities=19%  Similarity=0.077  Sum_probs=29.2

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3566666666777777777777777777777777666666663

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.7e-10  Score=71.91  Aligned_cols=43  Identities=21%  Similarity=0.269  Sum_probs=34.5

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   66 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            6667788888888888888888888888888888888888763

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7e-10  Score=69.07  Aligned_cols=42  Identities=19%  Similarity=0.295  Sum_probs=28.0

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666666666666666666666666666666666666664

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=4.5e-10  Score=70.67  Aligned_cols=40  Identities=15%  Similarity=0.311  Sum_probs=35.2

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCcccccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTK   41 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   41 (367)
                      ++++|.|++|++.|.....|..|+++|+++++|.|++|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            5788999999999999999999999999889999998875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.9e-10  Score=69.02  Aligned_cols=43  Identities=21%  Similarity=0.202  Sum_probs=32.2

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4667777777777777777777777777777777777777774

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.9e-10  Score=70.92  Aligned_cols=42  Identities=21%  Similarity=0.146  Sum_probs=33.8

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            666778888888888888888888888888888888888774

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=5.8e-10  Score=68.70  Aligned_cols=43  Identities=16%  Similarity=0.193  Sum_probs=32.6

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4667777777777777777777777777777777777777774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-10  Score=71.89  Aligned_cols=42  Identities=19%  Similarity=0.269  Sum_probs=30.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566677777777777777777777777777777777777765

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.8e-10  Score=71.81  Aligned_cols=42  Identities=21%  Similarity=0.239  Sum_probs=30.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            556677777777777777777777777777777777777765

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.2e-10  Score=70.64  Aligned_cols=44  Identities=20%  Similarity=0.212  Sum_probs=40.8

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDI  206 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~  206 (367)
                      .|+++|.+++||.|+.|++.|.....|..|+++|+++ +||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~-kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE-KPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSC-CCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCC-CCCCCCC
Confidence            3778899999999999999999999999999999998 9999975

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=6e-10  Score=68.63  Aligned_cols=43  Identities=19%  Similarity=0.219  Sum_probs=29.5

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.+++||.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            3566666677777777777777777777777777777776663

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=5.9e-10  Score=69.41  Aligned_cols=42  Identities=21%  Similarity=0.226  Sum_probs=26.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.1e-10  Score=70.15  Aligned_cols=41  Identities=17%  Similarity=0.203  Sum_probs=22.1

Q ss_pred             HhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccccc
Q psy2876         166 LHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDIC  207 (367)
Q Consensus       166 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~C  207 (367)
                      +|.++++|.|++|++.|.....|..|+++|+++ ++|.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE-KPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHC-CCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCC-CCCCCCCC
Confidence            344555555555555555555555555555554 55555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.7e-10  Score=69.85  Aligned_cols=43  Identities=19%  Similarity=0.177  Sum_probs=36.8

Q ss_pred             hhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         136 VIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       136 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      +++|.++++|.|+.|++.|.....|..|+++|.+++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567888888888888888888888888888888888888877

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.91  E-value=1e-09  Score=66.73  Aligned_cols=41  Identities=17%  Similarity=0.084  Sum_probs=29.8

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            55667777777777777777777777777777777777766

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=2.4e-10  Score=70.50  Aligned_cols=42  Identities=17%  Similarity=0.236  Sum_probs=32.4

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|++++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            566777777888888888888888888888888777777763

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=71.23  Aligned_cols=43  Identities=16%  Similarity=0.250  Sum_probs=34.7

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667778888888888888888888888888888888888875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=7e-10  Score=69.02  Aligned_cols=43  Identities=16%  Similarity=0.210  Sum_probs=32.8

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4667777777777777777777777777777777777777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.90  E-value=2.8e-10  Score=69.36  Aligned_cols=41  Identities=12%  Similarity=0.144  Sum_probs=29.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            44566677777777777777777777777777777777765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.6e-10  Score=71.08  Aligned_cols=42  Identities=17%  Similarity=0.280  Sum_probs=33.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677888888888888888888888888888888888775

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-10  Score=70.33  Aligned_cols=41  Identities=17%  Similarity=0.239  Sum_probs=32.9

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            56677788888888888888888888888888888888776

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.9e-10  Score=68.24  Aligned_cols=41  Identities=22%  Similarity=0.228  Sum_probs=24.3

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            45555555666666666666666666666666665555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.3e-10  Score=71.34  Aligned_cols=43  Identities=21%  Similarity=0.314  Sum_probs=34.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCC-CCceeccc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV-RRSFRCKS   66 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~   66 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++ ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888 78887753

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=6.8e-10  Score=69.12  Aligned_cols=41  Identities=27%  Similarity=0.305  Sum_probs=19.6

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP   43 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCS
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444444444444444444444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.3e-10  Score=69.62  Aligned_cols=44  Identities=16%  Similarity=0.181  Sum_probs=40.6

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCcccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCDI  206 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~~  206 (367)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++ ++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSRE-KSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHT-TCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCC-CCCCCCC
Confidence            3678899999999999999999999999999999998 9999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.5e-10  Score=70.36  Aligned_cols=42  Identities=17%  Similarity=0.234  Sum_probs=32.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566777777788888888888888888887777777777764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=7.6e-10  Score=67.38  Aligned_cols=41  Identities=27%  Similarity=0.336  Sum_probs=26.7

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45566666666666666666666666666666666666655

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.3e-10  Score=69.76  Aligned_cols=41  Identities=15%  Similarity=0.225  Sum_probs=30.6

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45567777777777777777777777777777777777765

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=8.2e-10  Score=67.24  Aligned_cols=41  Identities=22%  Similarity=0.225  Sum_probs=26.6

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.+++||.|+.|++.|...+.|..|+++|.+++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            45566666666666666666666666666666666666655

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.88  E-value=1.4e-09  Score=66.62  Aligned_cols=38  Identities=24%  Similarity=0.351  Sum_probs=21.0

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44555555555555555555555555555555555554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=8.4e-10  Score=68.69  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=28.0

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCC-CCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHET-SEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  176 (367)
                      |+++|.+++||.|+.|++.|.....|..|+++|.+ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55666666666666666666666666666666666 6666664

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=66.80  Aligned_cols=41  Identities=22%  Similarity=0.276  Sum_probs=25.0

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            45555566666666666666666666666666666666655

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=4.6e-10  Score=69.20  Aligned_cols=42  Identities=14%  Similarity=0.153  Sum_probs=29.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            445666677777777777777777777777777777777663

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=2.1e-10  Score=69.98  Aligned_cols=41  Identities=17%  Similarity=0.234  Sum_probs=27.0

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44556666666666666666666666666666666666655

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.2e-10  Score=69.29  Aligned_cols=41  Identities=22%  Similarity=0.197  Sum_probs=22.2

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      |+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSC
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCC
Confidence            44555555555555555555555555555555555555555

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.1e-09  Score=68.07  Aligned_cols=42  Identities=21%  Similarity=0.271  Sum_probs=24.5

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |+++|.++++|.|++|++.|.....|..|+++|.+++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555666666666666666666666666555555554

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=7e-10  Score=69.05  Aligned_cols=43  Identities=21%  Similarity=0.322  Sum_probs=40.1

Q ss_pred             HHHHHhCCCCCccCCccccccCChHHHHHHHHHHhccCCccccc
Q psy2876         162 KHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEYHTKHTCD  205 (367)
Q Consensus       162 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~C~  205 (367)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++ ++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~-~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT-DPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHS-CCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCC-CCCCCC
Confidence            4778899999999999999999999999999999998 999996

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=2.8e-09  Score=66.29  Aligned_cols=40  Identities=18%  Similarity=0.236  Sum_probs=27.9

Q ss_pred             HHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          26 EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        26 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      +.|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4566667777777777777777777777777777777665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=67.55  Aligned_cols=42  Identities=21%  Similarity=0.285  Sum_probs=28.3

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|.+++||.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            356666666666666666666666666666666666666666

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.9e-10  Score=68.09  Aligned_cols=41  Identities=20%  Similarity=0.104  Sum_probs=32.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            56677777888888888888888888888888887777765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.7e-09  Score=65.63  Aligned_cols=42  Identities=19%  Similarity=0.138  Sum_probs=31.0

Q ss_pred             hhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         134 NHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       134 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      .|+++|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            466677777777777777777777777777777777777765

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=2.5e-09  Score=67.06  Aligned_cols=44  Identities=14%  Similarity=0.052  Sum_probs=31.5

Q ss_pred             hhhccCCCcceecc--ccccccCCHHHHHHHHHHhCCCCCccCCcc
Q psy2876         135 HVIVHDESEVHKCL--YCFKVFVHKAHLDKHLILHETSEMHNCDFC  178 (367)
Q Consensus       135 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  178 (367)
                      |.++|.++++|.|.  .|++.|.....|..|+++|.+++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44566677777776  677777777777777777777777777765

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.1e-10  Score=69.95  Aligned_cols=41  Identities=20%  Similarity=0.252  Sum_probs=29.1

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            55666777777777777777777777777777777777766

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=3.5e-09  Score=65.84  Aligned_cols=40  Identities=18%  Similarity=0.291  Sum_probs=21.8

Q ss_pred             hccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         137 IVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       137 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      ++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3445555555555555555555555555555555555553

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=9.5e-10  Score=69.08  Aligned_cols=42  Identities=17%  Similarity=0.200  Sum_probs=30.2

Q ss_pred             HHhCCCcccccc--ccccccCCHHHHHHHHHhcCCCCceecccc
Q psy2876          26 EHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSFRCKSC   67 (367)
Q Consensus        26 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   67 (367)
                      ++|+++++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456677777776  677777777777777777777777777665

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.8e-09  Score=65.89  Aligned_cols=41  Identities=20%  Similarity=0.222  Sum_probs=30.1

Q ss_pred             hhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         136 VIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       136 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      .++|.++++|.|+.|++.|.....|..|+++|.+++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            45566777777777777777777777777777777777775

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.80  E-value=4.4e-09  Score=64.30  Aligned_cols=38  Identities=16%  Similarity=0.242  Sum_probs=19.5

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |.++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44445555555555555555555555555555555543

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2.2e-09  Score=66.42  Aligned_cols=40  Identities=20%  Similarity=0.287  Sum_probs=28.3

Q ss_pred             HHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecc
Q psy2876          26 EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCK   65 (367)
Q Consensus        26 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   65 (367)
                      ++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            3466677777777777777777777777777777777765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=6.4e-10  Score=77.24  Aligned_cols=66  Identities=17%  Similarity=0.101  Sum_probs=56.5

Q ss_pred             hhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         130 SHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       130 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      ..|..|+.++.+.+++.|+.|++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|..|++++.++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            46788888889999999999999994 88899998 888899999999999877 48889999887765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.3e-09  Score=64.81  Aligned_cols=38  Identities=16%  Similarity=0.242  Sum_probs=26.3

Q ss_pred             HhCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45666677777777777777777777777777776665

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=7.2e-09  Score=62.56  Aligned_cols=38  Identities=26%  Similarity=0.287  Sum_probs=23.5

Q ss_pred             ccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccC
Q psy2876         138 VHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNC  175 (367)
Q Consensus       138 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  175 (367)
                      +|.++++|.|+.|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45556666666666666666666666666666666655

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=9.1e-09  Score=68.21  Aligned_cols=35  Identities=20%  Similarity=0.233  Sum_probs=16.7

Q ss_pred             CCccccccc--cccccCCHHHHHHHH-HhcCCCCceec
Q psy2876          30 RNVLHKCHL--CTKAYPSEKNLDRHL-LTHNVRRSFRC   64 (367)
Q Consensus        30 ~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C   64 (367)
                      +++||+|++  |++.|...+.|..|+ ++|++++||.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            444455533  555555555555554 34444555444

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=5e-10  Score=77.78  Aligned_cols=63  Identities=22%  Similarity=0.262  Sum_probs=39.1

Q ss_pred             HHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHhc
Q psy2876          20 SFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIHE   85 (367)
Q Consensus        20 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~   85 (367)
                      .|..|++.+.+++++.|+.|++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|..|++++.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~   66 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCG   66 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHcc
Confidence            3445555666666666666666663 66666666 566666666666666655 355666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.67  E-value=1.2e-08  Score=60.76  Aligned_cols=35  Identities=23%  Similarity=0.576  Sum_probs=22.0

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKC   36 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   36 (367)
                      +++||.|++|++.|.....|..|+++|+++++|.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            45666666666666666666666666666666543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.59  E-value=3.3e-08  Score=56.48  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=23.6

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCcccc
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHK   35 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   35 (367)
                      +||.|++|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.57  E-value=3.1e-08  Score=58.93  Aligned_cols=37  Identities=19%  Similarity=0.307  Sum_probs=31.2

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCCCceec
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRC   64 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   64 (367)
                      |+++++|.|++|++.|.....|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5678889999999999999999999999988888765

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=4.9e-08  Score=57.56  Aligned_cols=30  Identities=20%  Similarity=0.348  Sum_probs=18.6

Q ss_pred             CCccccccc--cccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLY--CHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||+|++  |++.|...+.|..||++|+++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            556666654  666666666666666666553

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.52  E-value=3.8e-09  Score=75.65  Aligned_cols=55  Identities=25%  Similarity=0.302  Sum_probs=37.0

Q ss_pred             HHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHHHHHHHHHHh
Q psy2876          26 EHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEELLIVHQVIH   84 (367)
Q Consensus        26 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h   84 (367)
                      ++|+++++|.|++|++.|.....|..|+++|++++||.|..|..    ...|..|++.|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~   72 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYA   72 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccc
Confidence            45677777777777777777777777777777777777766543    33344454444

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.52  E-value=4.1e-08  Score=57.03  Aligned_cols=30  Identities=20%  Similarity=0.523  Sum_probs=21.8

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHL   38 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (367)
                      |+|||+|++|++.|...+.|.+|+       ||.|..
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            677777777777777777777777       666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=2.4e-08  Score=58.61  Aligned_cols=34  Identities=15%  Similarity=0.399  Sum_probs=18.7

Q ss_pred             HhCCCccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      +|+++++|.|+.|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3455555555555555555555555555555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.51  E-value=2.8e-08  Score=58.32  Aligned_cols=35  Identities=14%  Similarity=0.283  Sum_probs=24.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcCC
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV   58 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   58 (367)
                      |+++|++++||.|+.|++.|.....|..|++.|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45566677777777777777777777777776654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.50  E-value=7.5e-08  Score=55.56  Aligned_cols=33  Identities=21%  Similarity=0.280  Sum_probs=16.8

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      |+++++|.|++|++.|.....|..|++.|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344455555555555555555555555554443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.47  E-value=7.5e-08  Score=55.60  Aligned_cols=33  Identities=24%  Similarity=0.458  Sum_probs=19.1

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      |+++++|.|++|++.|.....|..|++.|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555666666666666666666665555544

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.46  E-value=9.8e-08  Score=55.05  Aligned_cols=33  Identities=21%  Similarity=0.373  Sum_probs=25.5

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCCCcc
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVL   33 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   33 (367)
                      ++++||.|++|++.|.....|..|++.|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            367788888888888888888888888877653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.1e-07  Score=55.58  Aligned_cols=32  Identities=16%  Similarity=0.314  Sum_probs=15.0

Q ss_pred             cCCCcceeccccccccCCHHHHHHHHHHhCCC
Q psy2876         139 HDESEVHKCLYCFKVFVHKAHLDKHLILHETS  170 (367)
Q Consensus       139 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  170 (367)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            44444444444444444444444444444443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.44  E-value=1.1e-07  Score=54.87  Aligned_cols=33  Identities=18%  Similarity=0.456  Sum_probs=24.1

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCCCcc
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVL   33 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   33 (367)
                      ++++||+|++|++.|.....|..|+++|++++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            356777777777777777777777777776653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=1.6e-07  Score=62.21  Aligned_cols=38  Identities=16%  Similarity=0.290  Sum_probs=32.1

Q ss_pred             CCCccccccc--cccccCCHHHHHHHH-HHhCCCccccccc
Q psy2876           1 MEKTLYKCLY--CHKVFKKSTSFDKHM-EHHNRNVLHKCHL   38 (367)
Q Consensus         1 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   38 (367)
                      +|+|||+|.+  |++.|...+.|..|+ ++|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            5788999975  999999999999997 5899999988865

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.44  E-value=1.3e-07  Score=55.40  Aligned_cols=34  Identities=21%  Similarity=0.244  Sum_probs=15.4

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHE  168 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  168 (367)
                      |+++|.+++||.|+.|++.|.....|..|+++|.
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   35 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhc
Confidence            3344444444444444444444444444444443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.39  E-value=1.9e-07  Score=53.17  Aligned_cols=32  Identities=22%  Similarity=0.443  Sum_probs=27.8

Q ss_pred             ccccccccccccCCHHHHHHHHHhcCCCCcee
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFR   63 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   63 (367)
                      +||.|++|++.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999888875

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=4.6e-08  Score=69.94  Aligned_cols=59  Identities=14%  Similarity=0.153  Sum_probs=41.8

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHHhc
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      |.++|.++++|.|+.|++.|.....|..|+++|.+++||.|..|.    ....|..|.+.|.+
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            345577788888888888888888888888888888888876654    33445556666554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.38  E-value=1.6e-07  Score=55.27  Aligned_cols=33  Identities=15%  Similarity=0.391  Sum_probs=21.0

Q ss_pred             CCcccccc--ccccccCCHHHHHHHHHHhCCCccc
Q psy2876           2 EKTLYKCL--YCHKVFKKSTSFDKHMEHHNRNVLH   34 (367)
Q Consensus         2 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   34 (367)
                      +++||+|+  .|++.|.....|..|+++|+++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            55666666  3666666666666666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.5e-07  Score=53.70  Aligned_cols=31  Identities=29%  Similarity=0.381  Sum_probs=16.0

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV   58 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   58 (367)
                      |.++++|.|++|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            4444555555555555555555555555544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=2.9e-07  Score=53.46  Aligned_cols=32  Identities=31%  Similarity=0.491  Sum_probs=18.2

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |.++++|.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44555555655666665555555565555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=3.6e-07  Score=52.95  Aligned_cols=31  Identities=29%  Similarity=0.574  Sum_probs=15.4

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV   58 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   58 (367)
                      |.++++|.|++|++.|.....|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            3444455555555555555555555555444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=3.6e-07  Score=53.79  Aligned_cols=32  Identities=16%  Similarity=0.388  Sum_probs=18.5

Q ss_pred             hCCCCCccCCc--cccccCChHHHHHHHHHHhcc
Q psy2876         167 HETSEMHNCDF--CHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       167 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +.+++||.|+.  |++.|..++.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34555666654  666666666666666665543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=2.5e-07  Score=53.72  Aligned_cols=32  Identities=31%  Similarity=0.761  Sum_probs=20.0

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |+++++|.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45566666666666666666666666666543

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.9e-07  Score=52.88  Aligned_cols=28  Identities=36%  Similarity=0.809  Sum_probs=13.7

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ++||+|++|++.|.....|..|+++|++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            4444555555555544445555444443

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=2.1e-07  Score=54.56  Aligned_cols=31  Identities=23%  Similarity=0.406  Sum_probs=16.2

Q ss_pred             HhCCCccccccccccccCCHHHHHHH-HHhcC
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRH-LLTHN   57 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~   57 (367)
                      +|++++||.|+.|++.|.....|..| ++.|+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            34455555555555555555555555 44444

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.26  E-value=3.8e-07  Score=53.67  Aligned_cols=35  Identities=20%  Similarity=0.399  Sum_probs=27.6

Q ss_pred             hCCCcccccc--ccccccCCHHHHHHHHHhcCCCCce
Q psy2876          28 HNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVRRSF   62 (367)
Q Consensus        28 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   62 (367)
                      |+++++|.|.  .|++.|.....|..|+++|+++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            4677788888  4888888888888888888877765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=3.9e-07  Score=53.23  Aligned_cols=33  Identities=21%  Similarity=0.410  Sum_probs=19.3

Q ss_pred             HhCCCccccccccccccCCH-HHHHHHHHhcCCC
Q psy2876          27 HHNRNVLHKCHLCTKAYPSE-KNLDRHLLTHNVR   59 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~   59 (367)
                      +|+++++|.|+.|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            34555566666666666665 6666666655543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=5.8e-07  Score=52.09  Aligned_cols=30  Identities=20%  Similarity=0.546  Sum_probs=20.5

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||+|++|++.|.....|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            566677777777777777777777766654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=4.9e-07  Score=52.37  Aligned_cols=30  Identities=20%  Similarity=0.442  Sum_probs=20.6

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||+|++|++.|.....|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            6 SGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            566777777777777777777777766654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.4e-07  Score=49.58  Aligned_cols=29  Identities=34%  Similarity=0.738  Sum_probs=20.3

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      ++||.|+.|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35677777777777777777777777654

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=6.7e-07  Score=51.82  Aligned_cols=30  Identities=33%  Similarity=0.655  Sum_probs=18.4

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||+|++|++.|.....|..|+++|+++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            6 SGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            455666666666666666666666666543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.22  E-value=9.9e-07  Score=51.01  Aligned_cols=30  Identities=23%  Similarity=0.378  Sum_probs=22.9

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||.|++|++.|.....|..|+++|+++
T Consensus         6 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            6 SGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            567777777877777777777777777765

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.21  E-value=3.9e-08  Score=55.71  Aligned_cols=31  Identities=26%  Similarity=0.417  Sum_probs=19.9

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCccc
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNVLH   34 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   34 (367)
                      +||+|++|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4566666666666666666666666666554

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.21  E-value=7e-07  Score=52.20  Aligned_cols=30  Identities=27%  Similarity=0.559  Sum_probs=16.5

Q ss_pred             CCccccccc--cccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLY--CHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||.|.+  |++.|...+.|..|+++|+++
T Consensus         5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            455555553  555555555555555555543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.21  E-value=1.1e-06  Score=48.00  Aligned_cols=28  Identities=18%  Similarity=0.605  Sum_probs=19.9

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4677777777777777777777777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.20  E-value=5.2e-07  Score=52.28  Aligned_cols=25  Identities=24%  Similarity=0.421  Sum_probs=15.3

Q ss_pred             CCCccccccccccccCCHHHHHHHH
Q psy2876          29 NRNVLHKCHLCTKAYPSEKNLDRHL   53 (367)
Q Consensus        29 ~~~~~~~C~~C~~~f~~~~~l~~H~   53 (367)
                      .+++||.|++|++.|...+.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4556666666666666666666665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=1e-06  Score=51.50  Aligned_cols=31  Identities=19%  Similarity=0.350  Sum_probs=15.2

Q ss_pred             ccCCCcceeccccccccCCHHHHHHH-HHHhC
Q psy2876         138 VHDESEVHKCLYCFKVFVHKAHLDKH-LILHE  168 (367)
Q Consensus       138 ~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~  168 (367)
                      +|.+++||.|+.|++.|.....|..| ++.|+
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            34444455555555555555555555 44443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=8.8e-07  Score=47.56  Aligned_cols=26  Identities=19%  Similarity=0.557  Sum_probs=17.4

Q ss_pred             CccccccccccccCCHHHHHHHHHHh
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      ++||+|+.||+.|.....|..|+++|
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHc
Confidence            35666777777776666666666665

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.17  E-value=7.5e-07  Score=55.56  Aligned_cols=32  Identities=25%  Similarity=0.536  Sum_probs=17.5

Q ss_pred             hCCCccccccccccccCCHHHHHHHHH-hcCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLL-THNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   59 (367)
                      |+++++|.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            455555555555555555555555555 55443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=50.92  Aligned_cols=32  Identities=22%  Similarity=0.507  Sum_probs=22.6

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |.++++|.|+.|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            45667777777777777777777777777654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=8.9e-07  Score=51.63  Aligned_cols=33  Identities=27%  Similarity=0.632  Sum_probs=21.6

Q ss_pred             HhCCCCCccCCccccccCCh-HHHHHHHHHHhcc
Q psy2876         166 LHETSEMHNCDFCHLTFTTD-NDLIRHMRSHEEY  198 (367)
Q Consensus       166 ~h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~  198 (367)
                      +|.+++||.|+.|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            45566666676677777666 6666776666553

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.14  E-value=7.2e-07  Score=48.73  Aligned_cols=28  Identities=25%  Similarity=0.487  Sum_probs=17.5

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3566666666666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.14  E-value=7.4e-07  Score=47.94  Aligned_cols=26  Identities=27%  Similarity=0.549  Sum_probs=16.6

Q ss_pred             CccccccccccccCCHHHHHHHHHHh
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      ++||+|++|++.|...+.|..|+++|
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhc
Confidence            35666666666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.13  E-value=8.6e-07  Score=48.01  Aligned_cols=26  Identities=27%  Similarity=0.579  Sum_probs=16.3

Q ss_pred             ccccccccccccCCHHHHHHHHHHhC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      +||+|++|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            56666666666666666666666554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.13  E-value=1.3e-06  Score=47.91  Aligned_cols=29  Identities=21%  Similarity=0.539  Sum_probs=19.3

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCc
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNV   32 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   32 (367)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35667777777777777777776666553

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.13  E-value=1.2e-06  Score=54.69  Aligned_cols=32  Identities=22%  Similarity=0.397  Sum_probs=21.3

Q ss_pred             CCCccccccccccccCCHHHHHHHHH-HhCCCc
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHME-HHNRNV   32 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   32 (367)
                      ++++||+|.+|++.|.....|..|++ +|+++.
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            35677777777777777777777777 666553

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.13  E-value=1.2e-06  Score=47.76  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=20.1

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4677777777777777777777777654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.9e-06  Score=57.50  Aligned_cols=30  Identities=27%  Similarity=0.561  Sum_probs=19.0

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +++||+|.+|++.|.....|..|+++|+++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            456666666666666666666666666654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.2e-06  Score=47.69  Aligned_cols=28  Identities=25%  Similarity=0.495  Sum_probs=19.9

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777777654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=1.5e-06  Score=48.74  Aligned_cols=29  Identities=24%  Similarity=0.553  Sum_probs=18.7

Q ss_pred             Ccccccc--ccccccCCHHHHHHHHHHhCCC
Q psy2876           3 KTLYKCL--YCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         3 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      ++||.|+  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3566666  6666666666666666666654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.08  E-value=6.4e-07  Score=50.47  Aligned_cols=29  Identities=7%  Similarity=-0.155  Sum_probs=26.8

Q ss_pred             ccCccccccccccccccccccccCCCCCC
Q psy2876         308 EDDSCDTYMDDTTENSNTYLKQETPDNED  336 (367)
Q Consensus       308 ~~~~C~~c~~~~~~~~~l~~H~~~h~~~~  336 (367)
                      +||.|+.||++|...++|..|+++|++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999998775

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.5e-07  Score=49.63  Aligned_cols=28  Identities=25%  Similarity=0.621  Sum_probs=19.4

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||+|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4677777777777777777777776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.7e-07  Score=49.94  Aligned_cols=29  Identities=21%  Similarity=0.619  Sum_probs=20.3

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      ++||.|+.|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            35677777777777777777777776654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.06  E-value=1.9e-06  Score=47.88  Aligned_cols=28  Identities=29%  Similarity=0.707  Sum_probs=17.3

Q ss_pred             cccccc--ccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCL--YCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6666666666666666666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.01  E-value=2.1e-06  Score=45.90  Aligned_cols=26  Identities=27%  Similarity=0.720  Sum_probs=14.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ||+|++|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            45566666666666666666555543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.01  E-value=2.7e-06  Score=49.56  Aligned_cols=32  Identities=31%  Similarity=0.583  Sum_probs=21.3

Q ss_pred             hCCCccccccc--cccccCCHHHHHHHHHhcCCC
Q psy2876          28 HNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |+++++|.|.+  |++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45666777763  777777777777777666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.7e-06  Score=46.03  Aligned_cols=29  Identities=24%  Similarity=0.494  Sum_probs=21.5

Q ss_pred             CccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          31 NVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        31 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      ++||.|+.|++.|.....|..|++.|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            35677778888887777777787777654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.24  E-value=8.6e-07  Score=48.47  Aligned_cols=28  Identities=14%  Similarity=0.070  Sum_probs=25.9

Q ss_pred             ccCccccccccccccccccccccCCCCC
Q psy2876         308 EDDSCDTYMDDTTENSNTYLKQETPDNE  335 (367)
Q Consensus       308 ~~~~C~~c~~~~~~~~~l~~H~~~h~~~  335 (367)
                      +||.|+.||+.|...++|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4899999999999999999999999875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.97  E-value=5.5e-06  Score=44.97  Aligned_cols=28  Identities=29%  Similarity=0.660  Sum_probs=20.7

Q ss_pred             ccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3677777777777777777777777654

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.96  E-value=1.8e-06  Score=53.48  Aligned_cols=36  Identities=19%  Similarity=0.408  Sum_probs=18.9

Q ss_pred             hhhccCCCcceecc--ccccccCCHHHHHHHHHHhCCC
Q psy2876         135 HVIVHDESEVHKCL--YCFKVFVHKAHLDKHLILHETS  170 (367)
Q Consensus       135 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  170 (367)
                      |...|.+++||.|+  .|++.|...+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            33445555555553  4555555555555555555443

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=1.1e-06  Score=48.41  Aligned_cols=29  Identities=7%  Similarity=-0.008  Sum_probs=26.5

Q ss_pred             cccCccccccccccccccccccccCCCCC
Q psy2876         307 QEDDSCDTYMDDTTENSNTYLKQETPDNE  335 (367)
Q Consensus       307 ~~~~~C~~c~~~~~~~~~l~~H~~~h~~~  335 (367)
                      ++||.|+.||+.|...++|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36899999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.95  E-value=3.8e-06  Score=45.70  Aligned_cols=28  Identities=25%  Similarity=0.515  Sum_probs=20.3

Q ss_pred             ccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3677777777777777777777777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.95  E-value=5.1e-06  Score=44.41  Aligned_cols=25  Identities=28%  Similarity=0.523  Sum_probs=14.6

Q ss_pred             ccccccccccccCCHHHHHHHHHhc
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h   56 (367)
                      +||.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4555666666666666666665554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=5.4e-07  Score=55.93  Aligned_cols=36  Identities=22%  Similarity=0.361  Sum_probs=23.0

Q ss_pred             HHHHhCCCcccccc--ccccccCCHHHHHHHHHhcCCC
Q psy2876          24 HMEHHNRNVLHKCH--LCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        24 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |+..|++++||.|+  .|++.|...+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            33446666667774  5777777666777776666654

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.18  E-value=1.2e-06  Score=46.51  Aligned_cols=25  Identities=36%  Similarity=0.749  Sum_probs=16.5

Q ss_pred             ccccccccccccCCHHHHHHHHHHh
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      +||+|++||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4666666666666666666666655

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.93  E-value=1.2e-05  Score=53.63  Aligned_cols=31  Identities=26%  Similarity=0.460  Sum_probs=17.8

Q ss_pred             CCCCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         168 ETSEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       168 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      .+++||.|..|++.|.....|..|+++|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3455566666666666666666666555553

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=4.3e-06  Score=44.80  Aligned_cols=25  Identities=28%  Similarity=0.610  Sum_probs=14.9

Q ss_pred             ccccccccccccCCHHHHHHHHHhc
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h   56 (367)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4566666666666666666665554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.92  E-value=5.5e-06  Score=44.64  Aligned_cols=26  Identities=19%  Similarity=0.529  Sum_probs=17.4

Q ss_pred             ccccccccccccCCHHHHHHHHHhcC
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h~   57 (367)
                      ++|.|+.|++.|.....|..|++.|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46667777777777667777766654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.91  E-value=3.1e-06  Score=46.49  Aligned_cols=28  Identities=25%  Similarity=0.608  Sum_probs=16.1

Q ss_pred             ccccccccccccCCHHHHHHH-HHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKH-MEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   31 (367)
                      +||.|+.|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            356666666666666666666 4555543

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.91  E-value=9.7e-06  Score=44.25  Aligned_cols=28  Identities=14%  Similarity=0.539  Sum_probs=19.9

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccC
Confidence            3577777777777777777777777655

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.5e-06  Score=46.14  Aligned_cols=26  Identities=12%  Similarity=0.081  Sum_probs=24.0

Q ss_pred             ccCccccccccccccccccccccCCC
Q psy2876         308 EDDSCDTYMDDTTENSNTYLKQETPD  333 (367)
Q Consensus       308 ~~~~C~~c~~~~~~~~~l~~H~~~h~  333 (367)
                      +||.|+.||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999884

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.88  E-value=5.8e-06  Score=44.84  Aligned_cols=27  Identities=37%  Similarity=0.639  Sum_probs=18.5

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCC
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +|.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            566777777777777777777666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.87  E-value=9.1e-06  Score=45.35  Aligned_cols=29  Identities=28%  Similarity=0.494  Sum_probs=22.1

Q ss_pred             Ccccccc--ccccccCCHHHHHHHHHhcCCC
Q psy2876          31 NVLHKCH--LCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        31 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      ++||.|+  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3577887  7888888888888888877764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.87  E-value=9.3e-06  Score=44.96  Aligned_cols=28  Identities=29%  Similarity=0.506  Sum_probs=22.0

Q ss_pred             cccccc--ccccccCCHHHHHHHHHhcCCC
Q psy2876          32 VLHKCH--LCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        32 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +||.|+  .|++.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            467887  7888888888888888887765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.87  E-value=8.4e-06  Score=43.40  Aligned_cols=27  Identities=15%  Similarity=0.401  Sum_probs=19.9

Q ss_pred             cccccccccccCCHHHHHHhHhhhcCCC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ||.|+.|++.|.....|..|+ .+|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~-~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQ-RVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHG-GGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHH-HHcCCC
Confidence            577888888888888888887 677653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.85  E-value=1.1e-05  Score=43.58  Aligned_cols=28  Identities=25%  Similarity=0.540  Sum_probs=21.3

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677888888888888888888777664

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.82  E-value=4.9e-06  Score=45.62  Aligned_cols=28  Identities=11%  Similarity=0.063  Sum_probs=25.7

Q ss_pred             ccCcccccccccccccccccc-ccCCCCC
Q psy2876         308 EDDSCDTYMDDTTENSNTYLK-QETPDNE  335 (367)
Q Consensus       308 ~~~~C~~c~~~~~~~~~l~~H-~~~h~~~  335 (367)
                      +||.|+.||+.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            489999999999999999999 8999875

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.72  E-value=1.4e-05  Score=43.30  Aligned_cols=26  Identities=23%  Similarity=0.671  Sum_probs=16.4

Q ss_pred             cccccc--ccccccCCHHHHHHHHHHhC
Q psy2876           4 TLYKCL--YCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         4 ~~~~C~--~C~~~f~~~~~l~~H~~~h~   29 (367)
                      +||.|+  .|++.|...+.|..|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            356666  66666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.45  E-value=6.2e-05  Score=40.54  Aligned_cols=25  Identities=28%  Similarity=0.717  Sum_probs=15.4

Q ss_pred             ccccc--ccccccCCHHHHHHHHHhcC
Q psy2876          33 LHKCH--LCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus        33 ~~~C~--~C~~~f~~~~~l~~H~~~h~   57 (367)
                      +|.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.32  E-value=0.00039  Score=45.90  Aligned_cols=45  Identities=18%  Similarity=0.398  Sum_probs=19.2

Q ss_pred             cccccCCHHHHHHHHH-HhCCCC------CccCC--ccccccCChHHHHHHHHH
Q psy2876         150 CFKVFVHKAHLDKHLI-LHETSE------MHNCD--FCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       150 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~  194 (367)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            4444444444444442 333322      34443  344444444444444443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.25  E-value=0.00042  Score=45.72  Aligned_cols=45  Identities=22%  Similarity=0.396  Sum_probs=22.1

Q ss_pred             cccccCCHHHHHHHH-HhcCCCC------ceecc--cccccccCHHHHHHHHHH
Q psy2876          39 CTKAYPSEKNLDRHL-LTHNVRR------SFRCK--SCGRRFESEELLIVHQVI   83 (367)
Q Consensus        39 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~L~~H~~~   83 (367)
                      |++.|.+...|..|+ ..|.+.+      +|.|.  .|++.+.....|..|+++
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            445555555555554 2343332      45554  455555555555555544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.11  E-value=0.00013  Score=58.76  Aligned_cols=140  Identities=16%  Similarity=0.189  Sum_probs=93.6

Q ss_pred             cceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChH-----HHH
Q psy2876         115 KVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDN-----DLI  189 (367)
Q Consensus       115 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~-----~L~  189 (367)
                      ..+.|++|...|..               |+.+ .||-.|- ..-+...+...    ...|+.|...+....     .+.
T Consensus        17 ~~~~C~IC~~~~~~---------------pv~~-~CgH~fC-~~Ci~~~~~~~----~~~CP~Cr~~~~~~~~~~~~~~~   75 (170)
T 3hcs_A           17 SKYECPICLMALRE---------------AVQT-PCGHRFC-KACIIKSIRDA----GHKCPVDNEILLENQLFPDNFAK   75 (170)
T ss_dssp             GGGBCTTTCSBCSS---------------EEEC-TTSCEEE-HHHHHHHHHHH----CSBCTTTCCBCCGGGCEECHHHH
T ss_pred             CCCCCCCCChhhcC---------------cEEC-CCCCHHH-HHHHHHHHHhC----CCCCCCCccCcchhhhhhhHHHH
Confidence            34789999877653               3343 3776665 33444444332    238999988876542     122


Q ss_pred             HHHHHHhccCCcccc--cccccccCCHHHHHHHHHh-cCCcccccccccccCCHHHHHHhHhhhcCCCCCcchhHhHHHH
Q psy2876         190 RHMRSHEEYHTKHTC--DICGEKFINDLKLKAHIKI-IHNLFTCIHCGDTLNNAKDYASHLLIIHNIESSQQVEKNLNNM  266 (367)
Q Consensus       190 ~H~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~-~H~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~C~~C~~~~  266 (367)
                      +-+.    . ....|  ..|+..+. ...|..|... .+.+..|+.|+..+ ....|..|+ ...-..++..|+.|+..+
T Consensus        76 ~~i~----~-l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~-~~~C~~r~~~C~~C~~~~  147 (170)
T 3hcs_A           76 REIL----S-LMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHI-LKDCPRRQVSCDNCAASM  147 (170)
T ss_dssp             HHHH----T-SEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHH-HHTCTTCEEECTTTCCEE
T ss_pred             HHHh----h-cccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHh-hhhCCCCCeECCCCCCcc
Confidence            2221    2 56778  46876654 5578889763 34578999999988 678899998 666677788899999988


Q ss_pred             HH-HHHHHHhhhcCCCCC
Q psy2876         267 YN-LLTTHIEYHHSQNNI  283 (367)
Q Consensus       267 ~~-~l~~H~~~h~~~~~~  283 (367)
                      .. .|..|..+++|+.++
T Consensus       148 ~~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          148 AFEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EGGGHHHHHTTCCC----
T ss_pred             CHHHHHhHHHhCcChhhh
Confidence            88 999999999887764

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.74  E-value=0.0025  Score=51.18  Aligned_cols=141  Identities=15%  Similarity=0.322  Sum_probs=79.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhcCCCCceecccccccccCHH-----HHHH
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFESEE-----LLIV   79 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~-----~L~~   79 (367)
                      .|.|++|...|..               |..+ .||-.|=. .=+...+...    ...|+.|...+....     .+..
T Consensus        18 ~~~C~IC~~~~~~---------------pv~~-~CgH~fC~-~Ci~~~~~~~----~~~CP~Cr~~~~~~~~~~~~~~~~   76 (170)
T 3hcs_A           18 KYECPICLMALRE---------------AVQT-PCGHRFCK-ACIIKSIRDA----GHKCPVDNEILLENQLFPDNFAKR   76 (170)
T ss_dssp             GGBCTTTCSBCSS---------------EEEC-TTSCEEEH-HHHHHHHHHH----CSBCTTTCCBCCGGGCEECHHHHH
T ss_pred             CCCCCCCChhhcC---------------cEEC-CCCCHHHH-HHHHHHHHhC----CCCCCCCccCcchhhhhhhHHHHH
Confidence            4678888777754               3333 35555532 2333333221    126777776655431     1111


Q ss_pred             HHHHhcCccccc--cccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhhccCCCcceeccccccccCCH
Q psy2876          80 HQVIHERKFHKC--TQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHK  157 (367)
Q Consensus        80 H~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  157 (367)
                      -+   ......|  ..|+.... ...|..|+.. -.-.+..|+.|+..+ ....|..|+...-+.++..|+.|+..+. .
T Consensus        77 ~i---~~l~v~C~n~GC~~~~~-~~~l~~H~~~-C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~  149 (170)
T 3hcs_A           77 EI---LSLMVKCPNEGCLHKME-LRHLEDHQAH-CEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-F  149 (170)
T ss_dssp             HH---HTSEEECCSTTCCCEEE-GGGHHHHHTT-CTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-G
T ss_pred             HH---hhcccCCCCCCCCceec-HhHHHHHHhc-CCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-H
Confidence            11   1234456  45666544 4456677632 234567788888777 4667788877666677778888887765 4


Q ss_pred             HHHHHHHHHhCCCCCc
Q psy2876         158 AHLDKHLILHETSEMH  173 (367)
Q Consensus       158 ~~l~~H~~~h~~~~~~  173 (367)
                      ..|..|..++.|..++
T Consensus       150 ~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          150 EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             GGHHHHHTTCCC----
T ss_pred             HHHHhHHHhCcChhhh
Confidence            5578888877776543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.32  E-value=0.0043  Score=47.04  Aligned_cols=76  Identities=17%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             CccccccccccccCCHHHHHHHH--HHhCCC-cccccccc------ccccCCHHHHHHHHHhcCCCCceecccccccccC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHM--EHHNRN-VLHKCHLC------TKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFES   73 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   73 (367)
                      .+++.|.+|+..|.+.+.+..|.  +.|... +.|.+...      +..+....    +.....+...|.|.+|+..|.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            36788999999999999999998  555432 23333111      11221110    1223455678999999999999


Q ss_pred             HHHHHHHHH
Q psy2876          74 EELLIVHQV   82 (367)
Q Consensus        74 ~~~L~~H~~   82 (367)
                      ...|..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            999999974

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.13  E-value=0.0045  Score=46.95  Aligned_cols=21  Identities=24%  Similarity=0.286  Sum_probs=13.2

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy2876         227 LFTCIHCGDTLNNAKDYASHL  247 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~  247 (367)
                      .|.|.+|+..|.+...|..|+
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~  113 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHY  113 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHH
T ss_pred             CeEcCCCCCEeCCHHHHHHHH
Confidence            455666666666666666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.45  E-value=0.0029  Score=47.17  Aligned_cols=24  Identities=33%  Similarity=0.671  Sum_probs=13.3

Q ss_pred             CCccccccccccccCCHHHHHHHH
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHM   25 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~   25 (367)
                      |++||.|..|++.|.+...|..|+
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~   70 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHF   70 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHT
T ss_pred             CCcceEcccCcchhCCHHHHHHHH
Confidence            445555555555555555555554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.26  E-value=0.0032  Score=46.99  Aligned_cols=27  Identities=26%  Similarity=0.502  Sum_probs=13.9

Q ss_pred             hCCCCCccCCccccccCChHHHHHHHH
Q psy2876         167 HETSEMHNCDFCHLTFTTDNDLIRHMR  193 (367)
Q Consensus       167 h~~~~~~~C~~C~~~f~~~~~L~~H~~  193 (367)
                      |+|.+||.|..|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            344455555555555555555555544

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.10  E-value=0.026  Score=33.62  Aligned_cols=23  Identities=22%  Similarity=0.423  Sum_probs=15.0

Q ss_pred             ccccccccccccCCHHHHHHHHH
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHME   26 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~   26 (367)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45666666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.67  E-value=0.024  Score=33.75  Aligned_cols=24  Identities=25%  Similarity=0.398  Sum_probs=16.7

Q ss_pred             CCccCCccccccCChHHHHHHHHH
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            456777777777777777777763

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.51  E-value=0.057  Score=30.04  Aligned_cols=24  Identities=21%  Similarity=0.389  Sum_probs=12.1

Q ss_pred             ccccccccccCCHHHHHHHHHhcC
Q psy2876         202 HTCDICGEKFINDLKLKAHIKIIH  225 (367)
Q Consensus       202 ~~C~~C~~~f~~~~~l~~H~~~~H  225 (367)
                      |.||+|.+.|.+...|..|....|
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhcc
Confidence            455555555555555555544333

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.27  E-value=0.05  Score=30.29  Aligned_cols=22  Identities=18%  Similarity=0.560  Sum_probs=11.3

Q ss_pred             ccCCccccccCChHHHHHHHHH
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      |.|++|.+.|.+...|..|...
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHHHHh
Confidence            4555555555555555555443

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=88.77  E-value=0.34  Score=25.95  Aligned_cols=24  Identities=21%  Similarity=0.526  Sum_probs=13.7

Q ss_pred             cccccccccCCHHHHHHhHhhhcC
Q psy2876         229 TCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       229 ~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      -|..|.+.+++..+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            355566666666666666655553

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.88  E-value=0.51  Score=31.69  Aligned_cols=38  Identities=18%  Similarity=0.567  Sum_probs=19.8

Q ss_pred             ccccccccccCCHHHHHHHHHhcCCCCceeccccccccc
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGRRFE   72 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   72 (367)
                      |.|..|+.++.. ..|..|...-.+-..|.|-.|++.|.
T Consensus        11 F~C~~Cgd~lKK-~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           11 FTCNACGESVKK-IQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEESSSCCEEET-THHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEcCCCCCeeec-ccchhHHhhCCCCCcEEecccCCeeC
Confidence            555555555543 24555554444334455656665555

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=82.38  E-value=1.1  Score=23.96  Aligned_cols=24  Identities=29%  Similarity=0.636  Sum_probs=16.0

Q ss_pred             cccccccccCCHHHHHHHHHhcCC
Q psy2876         203 TCDICGEKFINDLKLKAHIKIIHN  226 (367)
Q Consensus       203 ~C~~C~~~f~~~~~l~~H~~~~H~  226 (367)
                      -|..|.+.++...+|..|++..|.
T Consensus        11 hcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC
Confidence            466677777777777777666554

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=80.51  E-value=2.8  Score=25.68  Aligned_cols=45  Identities=20%  Similarity=0.466  Sum_probs=23.4

Q ss_pred             cccccccccCCHHHHHHHHHHhCCCccccccccccc-cCCHHHHHHHHH
Q psy2876           7 KCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKA-YPSEKNLDRHLL   54 (367)
Q Consensus         7 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~-f~~~~~l~~H~~   54 (367)
                      .|++|.....+...|..|...-...   +||+|-.. -.+.+.|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            4566665555555666665555432   35555322 345555555553

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=80.29  E-value=0.92  Score=30.44  Aligned_cols=47  Identities=28%  Similarity=0.567  Sum_probs=25.4

Q ss_pred             ccccccccccCCHHHHHHHHHHccCCcceeCCCCCCccCChhhhhhhhh
Q psy2876          89 HKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVI  137 (367)
Q Consensus        89 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  137 (367)
                      |.|..|+.++. +..|..|+..-.+...|.|-.|+..|.. ..++.|..
T Consensus        11 F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A           11 FTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             EEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             EEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            55666665443 3345556554444345666666666663 44555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	367
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	8e-04

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 9e-05
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 87  KFHKCTQCEESFKNKKHLKQHLLAHEKVKVFHCPKCPKLFRHESHLQNHVIVH 139
           K + C QC +SF +K    +H+  H  ++ + C  C K F+ + HL  H+ +H
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 150 CFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSH 195
           C K F HK+  D+H+ +H     + C  C   F   + L+ HM+ H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 115 KVFHCPKCPKLFRHESHLQNHVIVHDESEVHKCLYCFKVFVHKAHLDKHLILH 167
           K++ C +C K F H+S    H+ +H     + C  C K F  K HL  H+ +H
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 8e-04
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 6  YKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTH 56
          Y C  C K F   +  D+HM  H     + C +C K +  + +L  H+  H
Sbjct: 4  YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	367
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.63
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.55
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.26
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.09
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.08
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.06
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.02
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.0
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.99
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.99
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.97
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.93
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.91
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.86
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.85
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.82
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.8
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.79
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.78
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.7
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.67
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.65
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.62
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.62
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.51
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.48
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.4
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.39
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.3
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.19
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.12
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.07
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.01
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.99
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.9
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.9
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.84
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.81
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.62
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.55
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.44
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.43
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.41
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.37
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.35
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.34
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.33
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.33
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.29
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.2
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.2
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.08
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.06
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.02
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.98
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.97
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.95
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.94
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.94
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.93
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.89
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.88
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.76
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.7
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.64
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.62
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.2
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.18
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.1
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.08
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.93
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.69
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.61
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.46
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.42
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.4
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.37
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.37
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.62
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.38
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.91
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.46
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.44
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.77
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.48
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.33
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.84
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.69
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.43
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	90.12
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.96
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	89.86
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.54
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.36
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	87.56
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.23
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.03
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.79
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	86.41
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.81
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.65
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	85.55
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.25
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.39
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.81
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.94
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	81.78

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=7.6e-17  Score=102.54  Aligned_cols=53  Identities=30%  Similarity=0.577  Sum_probs=45.8

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCCccccccccccccCCHHHHHHHHHhc
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h   56 (367)
                      ||||+|+ ||+.|.....|..|+++|++++||.|++|++.|...+.|..||++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            6788884 8888888888888888888888888888888888888888888776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-15  Score=96.52  Aligned_cols=53  Identities=30%  Similarity=0.632  Sum_probs=33.0

Q ss_pred             CcceeccccccccCCHHHHHHHHHHhCCCCCccCCccccccCChHHHHHHHHHH
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKHLILHETSEMHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      ++||.|+ ||+.|.....|..|+++|++++||.|++|++.|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            3556663 6666666666666666666666666666666666666666666544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.2e-12  Score=75.33  Aligned_cols=37  Identities=27%  Similarity=0.594  Sum_probs=29.5

Q ss_pred             CCccccccccccccCCHHHHHHHHH-HhCCCccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHME-HHNRNVLHKCHL   38 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   38 (367)
                      .+|||+|++||+.|...++|.+||+ +|++++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4678888888888888888888875 688888888863

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=2.8e-11  Score=69.52  Aligned_cols=37  Identities=22%  Similarity=0.530  Sum_probs=32.3

Q ss_pred             CCccccccccccccCCHHHHHHHHH-hcCCCCceeccc
Q psy2876          30 RNVLHKCHLCTKAYPSEKNLDRHLL-THNVRRSFRCKS   66 (367)
Q Consensus        30 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   66 (367)
                      .++||+|.+||+.|...+.|.+|++ +|++++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999986 699999999874

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.6e-11  Score=66.79  Aligned_cols=30  Identities=27%  Similarity=0.542  Sum_probs=15.3

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCC
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ||+|||+|.+||+.|...+.|..|+++|+|
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            345555555555555555555555555544

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=9.6e-12  Score=71.68  Aligned_cols=37  Identities=22%  Similarity=0.388  Sum_probs=28.0

Q ss_pred             HHHHHhCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          23 KHMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        23 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +|+++|++++||.|++||+.|...+.|.+|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3666777777777777777777777777777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=6.1e-11  Score=66.25  Aligned_cols=30  Identities=20%  Similarity=0.500  Sum_probs=17.9

Q ss_pred             CCCccccccccccccCCHHHHHHHHHHhCC
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ||+|||+|++|++.|...+.|.+||++|++
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCC
Confidence            455666666666666666666666666554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9e-11  Score=64.60  Aligned_cols=33  Identities=24%  Similarity=0.317  Sum_probs=25.5

Q ss_pred             HhCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +|++++||.|.+|++.|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            477788888888888888888888888877764

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=8.5e-11  Score=67.60  Aligned_cols=35  Identities=31%  Similarity=0.361  Sum_probs=18.8

Q ss_pred             hhhccCCCcceeccccccccCCHHHHHHHHHHhCC
Q psy2876         135 HVIVHDESEVHKCLYCFKVFVHKAHLDKHLILHET  169 (367)
Q Consensus       135 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  169 (367)
                      |+++|.+++||.|+.||++|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            44555555555555555555555555555555544

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.99  E-value=7.7e-11  Score=62.14  Aligned_cols=28  Identities=21%  Similarity=0.634  Sum_probs=23.1

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ||||+|++|++.|...+.|..||++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888875

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.97  E-value=1.4e-10  Score=61.99  Aligned_cols=29  Identities=17%  Similarity=0.565  Sum_probs=21.7

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCc
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNV   32 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   32 (367)
                      |||+|++|++.|...+.|.+||++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57777777777777777777777777764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2e-10  Score=65.02  Aligned_cols=32  Identities=22%  Similarity=0.388  Sum_probs=15.8

Q ss_pred             HhCCCccccccccccccCCHHHHHHHHHhcCC
Q psy2876          27 HHNRNVLHKCHLCTKAYPSEKNLDRHLLTHNV   58 (367)
Q Consensus        27 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   58 (367)
                      +|+|++||+|.+|++.|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            34455555555555555555555555554443

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.1e-10  Score=66.67  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=22.2

Q ss_pred             HHHHhCCCccccccccccccCCHHHHHHHHHhcC
Q psy2876          24 HMEHHNRNVLHKCHLCTKAYPSEKNLDRHLLTHN   57 (367)
Q Consensus        24 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   57 (367)
                      |.++|+|++||+|++|++.|...+.|.+|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4456666666666666666666666666666664

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=2.8e-10  Score=60.60  Aligned_cols=29  Identities=28%  Similarity=0.602  Sum_probs=22.4

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCCc
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRNV   32 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   32 (367)
                      |||.|++||+.|...+.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            57788888888888888888888887764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=7.5e-10  Score=62.59  Aligned_cols=35  Identities=23%  Similarity=0.447  Sum_probs=29.9

Q ss_pred             HhcCCCCceecccccccccCHHHHHHHHHHhcCcc
Q psy2876          54 LTHNVRRSFRCKSCGRRFESEELLIVHQVIHERKF   88 (367)
Q Consensus        54 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   88 (367)
                      ++|++++||.|.+|++.|...+.|..|+++|++..
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            46889999999999999999999999998887543

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=6.6e-10  Score=61.96  Aligned_cols=32  Identities=25%  Similarity=0.496  Sum_probs=22.6

Q ss_pred             hCCCccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          28 HNRNVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        28 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      |+|++||+|++|++.|...+.|.+|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            56777777777777777777777777777653

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=7e-10  Score=63.20  Aligned_cols=31  Identities=19%  Similarity=0.346  Sum_probs=14.2

Q ss_pred             HHhCCCCCccCCccccccCChHHHHHHHHHH
Q psy2876         165 ILHETSEMHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       165 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      ++|++++||.|++|++.|..++.|..|+++|
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            3444444444444444444444444444444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.82  E-value=9.9e-10  Score=57.80  Aligned_cols=28  Identities=25%  Similarity=0.651  Sum_probs=18.1

Q ss_pred             CCCccCCccccccCChHHHHHHHHHHhc
Q psy2876         170 SEMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       170 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      ++||.|++|++.|..++.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4566666666666666666666666654

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=9.2e-10  Score=62.11  Aligned_cols=32  Identities=22%  Similarity=0.460  Sum_probs=18.7

Q ss_pred             HhCCCCCccCCccccccCChHHHHHHHHHHhc
Q psy2876         166 LHETSEMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       166 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      +|+|++||.|++|++.|..+++|..|++.+++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            45566666666666666666666666554443

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.80  E-value=1.6e-09  Score=57.76  Aligned_cols=29  Identities=28%  Similarity=0.668  Sum_probs=25.0

Q ss_pred             ccccccccccccCCHHHHHHHHHhcCCCC
Q psy2876          32 VLHKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        32 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      +||.|++|++.|...+.|.+|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58889999999999999999999988875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.1e-09  Score=61.51  Aligned_cols=32  Identities=25%  Similarity=0.527  Sum_probs=23.1

Q ss_pred             ccccc--cccccCCHHHHHHHHHHhCCCcccccc
Q psy2876           6 YKCLY--CHKVFKKSTSFDKHMEHHNRNVLHKCH   37 (367)
Q Consensus         6 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~   37 (367)
                      |.|+.  |++.|.....|.+||++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56665  777777777777777777777777775

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.1e-09  Score=56.04  Aligned_cols=26  Identities=35%  Similarity=0.706  Sum_probs=19.5

Q ss_pred             ccccccccccccCCHHHHHHHHHHhC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      |||+|++||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777763

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=4.1e-09  Score=59.37  Aligned_cols=34  Identities=18%  Similarity=0.450  Sum_probs=24.5

Q ss_pred             hccCCCcceeccccccccCCHHHHHHHHHHhCCC
Q psy2876         137 IVHDESEVHKCLYCFKVFVHKAHLDKHLILHETS  170 (367)
Q Consensus       137 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  170 (367)
                      ++|+|++||+|++|++.|..+++|..|++.++++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            3577777777777777777777777777655443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=4.9e-09  Score=55.69  Aligned_cols=28  Identities=21%  Similarity=0.570  Sum_probs=20.9

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +||.|++|++.|..++.|..|+++|+++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4677777777777777777777777765

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=5.3e-09  Score=55.89  Aligned_cols=28  Identities=21%  Similarity=0.631  Sum_probs=21.5

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      |||+|++  |++.|...+.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5777877  888888777788887777765

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=6.3e-09  Score=58.40  Aligned_cols=32  Identities=34%  Similarity=0.617  Sum_probs=16.9

Q ss_pred             eeccc--cccccCCHHHHHHHHHHhCCCCCccCC
Q psy2876         145 HKCLY--CFKVFVHKAHLDKHLILHETSEMHNCD  176 (367)
Q Consensus       145 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  176 (367)
                      |.|+.  |+++|.....|.+|+++|++++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            34443  555555555555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=5.4e-09  Score=55.98  Aligned_cols=28  Identities=21%  Similarity=0.602  Sum_probs=22.1

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      |||+|++  |++.|...+.|.+||++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5788876  888888888888888888765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.62  E-value=5.7e-10  Score=67.08  Aligned_cols=40  Identities=30%  Similarity=0.522  Sum_probs=28.2

Q ss_pred             HHHHHHHHhCCCccccccc--cccccCCHHHHHHHHHhcCCCC
Q psy2876          20 SFDKHMEHHNRNVLHKCHL--CTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        20 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      .|..|++ |++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3455563 77777777766  7777777777777777777664

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=8.7e-09  Score=52.65  Aligned_cols=25  Identities=32%  Similarity=0.580  Sum_probs=14.4

Q ss_pred             CCccCCccccccCChHHHHHHHHHH
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      +||.|.+||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3555555555555555555555555

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=3.4e-09  Score=63.59  Aligned_cols=39  Identities=21%  Similarity=0.476  Sum_probs=22.7

Q ss_pred             hhhhhhhccCCCcceeccc--cccccCCHHHHHHHHHHhCCC
Q psy2876         131 HLQNHVIVHDESEVHKCLY--CFKVFVHKAHLDKHLILHETS  170 (367)
Q Consensus       131 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  170 (367)
                      .|..|+. |.+++||.|++  |++.|...+.|..|+++|+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3444553 56666666654  666666666666666666554

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.5e-08  Score=54.77  Aligned_cols=29  Identities=28%  Similarity=0.663  Sum_probs=19.0

Q ss_pred             cccccc--ccccccCCHHHHHHHHHHhCCCc
Q psy2876           4 TLYKCL--YCHKVFKKSTSFDKHMEHHNRNV   32 (367)
Q Consensus         4 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   32 (367)
                      |||.|+  .|++.|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            466664  37777777777777777666653

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.6e-08  Score=52.58  Aligned_cols=28  Identities=32%  Similarity=0.725  Sum_probs=17.8

Q ss_pred             CCccCCc--cccccCChHHHHHHHHHHhcc
Q psy2876         171 EMHNCDF--CHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       171 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +||.|++  |+++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4566666  666666666666666666653

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.8e-08  Score=52.60  Aligned_cols=28  Identities=32%  Similarity=0.606  Sum_probs=17.5

Q ss_pred             CCccCCc--cccccCChHHHHHHHHHHhcc
Q psy2876         171 EMHNCDF--CHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       171 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      +||.|++  |+++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4566655  666666666666666666653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.40  E-value=5.9e-08  Score=52.56  Aligned_cols=28  Identities=25%  Similarity=0.585  Sum_probs=19.4

Q ss_pred             Cccccccc--cccccCCHHHHHHHHHHhCC
Q psy2876           3 KTLYKCLY--CHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         3 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   30 (367)
                      |+||.|++  |++.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            46777766  77777777777777777664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.39  E-value=4.5e-08  Score=51.71  Aligned_cols=27  Identities=26%  Similarity=0.687  Sum_probs=20.5

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhCC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   30 (367)
                      |||+|++  |++.|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5777777  77777777777777777764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=2e-07  Score=50.17  Aligned_cols=29  Identities=28%  Similarity=0.519  Sum_probs=23.9

Q ss_pred             cccccc--ccccccCCHHHHHHHHHhcCCCC
Q psy2876          32 VLHKCH--LCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        32 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      +||.|+  .|++.|...+.|.+|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578885  48888888888888888888864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.5e-07  Score=49.05  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=17.7

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   29 (367)
                      +||.|++  ||+.|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777776664

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=2.4e-07  Score=48.86  Aligned_cols=27  Identities=33%  Similarity=0.663  Sum_probs=16.2

Q ss_pred             CCccCCc--cccccCChHHHHHHHHHHhc
Q psy2876         171 EMHNCDF--CHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       171 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  197 (367)
                      +||.|++  |++.|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  66666666666666666653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.19  E-value=4.3e-07  Score=49.07  Aligned_cols=28  Identities=43%  Similarity=0.858  Sum_probs=17.8

Q ss_pred             CCCccCCc--cccccCChHHHHHHHHHHhc
Q psy2876         170 SEMHNCDF--CHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       170 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  197 (367)
                      ++||.|++  |++.|...+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35666665  66666666666666666653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3.6e-07  Score=44.01  Aligned_cols=26  Identities=31%  Similarity=0.604  Sum_probs=18.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      |.+|++|++-|+.+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46677777777777777777777654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=4.9e-07  Score=47.04  Aligned_cols=26  Identities=27%  Similarity=0.621  Sum_probs=18.0

Q ss_pred             CCccCCc--cccccCChHHHHHHHHHHh
Q psy2876         171 EMHNCDF--CHLTFTTDNDLIRHMRSHE  196 (367)
Q Consensus       171 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  196 (367)
                      +||.|+.  |+++|...+.|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777663

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.07  E-value=9e-07  Score=44.17  Aligned_cols=27  Identities=22%  Similarity=0.503  Sum_probs=20.1

Q ss_pred             CccccccccccccCCHHHHHHHHHHhC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      ||||.|++||+.|.......+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            567777777777777777777777764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.8e-06  Score=43.66  Aligned_cols=29  Identities=28%  Similarity=0.592  Sum_probs=20.2

Q ss_pred             CCCccCCccccccCChHHHHHHHHHHhcc
Q psy2876         170 SEMHNCDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       170 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      ++||.|++|+..|..++.+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46777777777777777777777777653

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2.3e-06  Score=41.20  Aligned_cols=26  Identities=19%  Similarity=0.447  Sum_probs=18.4

Q ss_pred             cccccccccccCCHHHHHHhHhhhcCC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHNI  253 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  253 (367)
                      |.+|++|++.|+++..|+.|+ +.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hm-r~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHM-RCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHG-GGCCC
T ss_pred             CCccchhhhHhcchhHHHHHh-hccCC
Confidence            456777777777777777777 66654

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=1.4e-06  Score=43.11  Aligned_cols=27  Identities=22%  Similarity=0.529  Sum_probs=15.0

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      +||+|..|...-...+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555554

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=4.3e-06  Score=42.27  Aligned_cols=28  Identities=25%  Similarity=0.581  Sum_probs=16.5

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCC
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ||||.|++|+..|..+..+.-|.+.|-|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4566666666666666666666655544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.3e-06  Score=44.32  Aligned_cols=29  Identities=21%  Similarity=0.450  Sum_probs=15.4

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCccc
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHHNRNVLH   34 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   34 (367)
                      ..|+.||+.|.....|.+|...|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34555555555555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.6e-06  Score=43.18  Aligned_cols=31  Identities=19%  Similarity=0.388  Sum_probs=27.6

Q ss_pred             cccccccccccCCHHHHHHhHhhhcCCCCCcc
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHNIESSQQ  258 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~  258 (367)
                      ...|+.||+.|.+...|.+|. ..|++|+||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhk-lshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHK-LSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHG-GGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhh-cccCCCCCCC
Confidence            357999999999999999998 8999999983

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.84  E-value=6.2e-06  Score=41.09  Aligned_cols=25  Identities=36%  Similarity=0.801  Sum_probs=13.4

Q ss_pred             CceecccccccccCHHHHHHHHHHh
Q psy2876          60 RSFRCKSCGRRFESEELLIVHQVIH   84 (367)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h   84 (367)
                      +||.|++||+.|........|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555444

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=5.7e-06  Score=40.83  Aligned_cols=29  Identities=28%  Similarity=0.465  Sum_probs=23.3

Q ss_pred             CccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          31 NVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        31 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      ++||+|..|.+.-.+.+.|..|++.|+++
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46888888888888888888888888763

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=6.2e-06  Score=41.75  Aligned_cols=27  Identities=26%  Similarity=0.582  Sum_probs=19.1

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhCC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   30 (367)
                      |||.|.+  |++.|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5777776  77777777777777776553

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.9e-05  Score=38.62  Aligned_cols=26  Identities=35%  Similarity=0.657  Sum_probs=20.9

Q ss_pred             ccccccccccccCCHHHHHHHHHHhC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      |||+|..|+..-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            67888888888888888888888775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=3.7e-05  Score=38.14  Aligned_cols=26  Identities=31%  Similarity=0.521  Sum_probs=17.9

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCC
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      |.|++||.....++-|++|++.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            66777777777777777777777665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4e-05  Score=37.56  Aligned_cols=26  Identities=23%  Similarity=0.614  Sum_probs=21.2

Q ss_pred             ccccccccccCCHHHHHHhHhhhcCCC
Q psy2876         228 FTCIHCGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       228 ~~C~~C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ..|..||++|...+.|++|+ .+|+||
T Consensus         3 hvc~ecgkaf~essklkrh~-lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQ-LVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHG-GGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHh-hcccCC
Confidence            46888888888888888888 888775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=3.9e-05  Score=38.05  Aligned_cols=23  Identities=39%  Similarity=0.857  Sum_probs=14.3

Q ss_pred             cccccccccccCCHHHHHHHHHH
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEH   27 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~   27 (367)
                      ||.|..|+..|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56666666666666666666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.41  E-value=7.9e-05  Score=36.93  Aligned_cols=27  Identities=26%  Similarity=0.369  Sum_probs=23.4

Q ss_pred             ccccccccccCCHHHHHHHHHhcCCCC
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTHNVRR   60 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h~~~~   60 (367)
                      |.|+.|+.....++.|..|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999998763

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.37  E-value=5.4e-05  Score=38.57  Aligned_cols=28  Identities=18%  Similarity=0.314  Sum_probs=22.6

Q ss_pred             cccccccccccCCHHHHHHhHhhhcCCC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ||.|.+|++.|.+...|.+|.++.|.|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            6788888888888888888887888763

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.35  E-value=8.5e-05  Score=35.79  Aligned_cols=26  Identities=27%  Similarity=0.502  Sum_probs=18.5

Q ss_pred             cccccccccCCHHHHHHHHHHhCCCc
Q psy2876           7 KCLYCHKVFKKSTSFDKHMEHHNRNV   32 (367)
Q Consensus         7 ~C~~C~~~f~~~~~l~~H~~~h~~~~   32 (367)
                      +|+.|.++|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777653

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.34  E-value=5.8e-05  Score=41.25  Aligned_cols=28  Identities=29%  Similarity=0.814  Sum_probs=18.7

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   31 (367)
                      +.|+|.+|++.|.+..+|-.||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4566777777777777777777666544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.33  E-value=8.5e-05  Score=36.73  Aligned_cols=27  Identities=22%  Similarity=0.671  Sum_probs=15.1

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCC
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      ..|.|..|...|.....|+.||..|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            345555555555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=5.4e-05  Score=38.24  Aligned_cols=17  Identities=24%  Similarity=0.653  Sum_probs=7.5

Q ss_pred             cccccCChHHHHHHHHH
Q psy2876         178 CHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       178 C~~~f~~~~~L~~H~~~  194 (367)
                      |+++++..++|+.|++.
T Consensus        10 C~K~YtdPSSLRKH~k~   26 (29)
T d2glia5          10 CTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             TCCEESSHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHh
Confidence            44444444444444443

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=8.6e-05  Score=36.35  Aligned_cols=24  Identities=33%  Similarity=0.682  Sum_probs=12.3

Q ss_pred             eccccccccCCHHHHHHHHHHhCC
Q psy2876         146 KCLYCFKVFVHKAHLDKHLILHET  169 (367)
Q Consensus       146 ~C~~C~~~f~~~~~l~~H~~~h~~  169 (367)
                      .|..||+.|...+.|.+|+.+|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455555555555555555555544

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.00012  Score=36.47  Aligned_cols=28  Identities=18%  Similarity=0.405  Sum_probs=18.3

Q ss_pred             cccccccccccCCHHHHHHhHhhhcCCC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ||.|..|.+...+.++|+.|+...|..|
T Consensus         2 py~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccccccccccccchhhhhhhhcccccC
Confidence            5666666666666666666665666554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.20  E-value=0.00014  Score=35.94  Aligned_cols=29  Identities=17%  Similarity=0.560  Sum_probs=23.3

Q ss_pred             CccccccccccccCCHHHHHHHHHhcCCC
Q psy2876          31 NVLHKCHLCTKAYPSEKNLDRHLLTHNVR   59 (367)
Q Consensus        31 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   59 (367)
                      +..|.|..|...|..+..|+.||.+|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45678888888888888888888888764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.08  E-value=0.00026  Score=34.05  Aligned_cols=24  Identities=33%  Similarity=0.535  Sum_probs=11.7

Q ss_pred             CCccccccCChHHHHHHHHHHhcc
Q psy2876         175 CDFCHLTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       175 C~~C~~~f~~~~~L~~H~~~h~~~  198 (367)
                      |+.|.+.|.++.-|..|.+.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            444555555555555554444443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.0002  Score=35.41  Aligned_cols=23  Identities=22%  Similarity=0.608  Sum_probs=18.1

Q ss_pred             cccccccccccCCHHHHHHHHHh
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLT   55 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~   55 (367)
                      ||.|..|+..|.++.+|..||++
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57788888888888888888865

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00016  Score=34.21  Aligned_cols=23  Identities=30%  Similarity=0.804  Sum_probs=11.6

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy2876           6 YKCLYCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         6 ~~C~~C~~~f~~~~~l~~H~~~h   28 (367)
                      |+|..|.++|-.+++|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            44555555555555555554444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.98  E-value=0.00035  Score=38.08  Aligned_cols=23  Identities=35%  Similarity=0.719  Sum_probs=10.2

Q ss_pred             ccCCccccccCChHHHHHHHHHH
Q psy2876         173 HNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      |.|.+|++.|.+..+|--|++.|
T Consensus         6 ~~C~~C~k~F~s~qALGGH~~~H   28 (37)
T d1njqa_           6 YTCSFCKREFRSAQALGGHMNVH   28 (37)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTT
T ss_pred             cCCCCCCCccCCcccccchHhhh
Confidence            44444444444444444444444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.97  E-value=0.00023  Score=35.11  Aligned_cols=25  Identities=28%  Similarity=0.622  Sum_probs=18.0

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHh
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h   28 (367)
                      .||+|+.  |++.|...+.|.+|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677775  777777777777777665

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00028  Score=34.35  Aligned_cols=25  Identities=24%  Similarity=0.562  Sum_probs=14.4

Q ss_pred             cccccccccccCCHHHHHHhHhhhcC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      ||+|..|.+...+.++|++|+ ++|.
T Consensus         3 p~kck~cdyaaadsssl~kh~-rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHL-RIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHH-HHSC
T ss_pred             CcccccccchhcchhhHhhhh-hccc
Confidence            555666666666666666665 5553

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.0003  Score=38.50  Aligned_cols=25  Identities=32%  Similarity=0.598  Sum_probs=15.9

Q ss_pred             CCCccccccccccccCCHHHHHHHH
Q psy2876           1 MEKTLYKCLYCHKVFKKSTSFDKHM   25 (367)
Q Consensus         1 ~~~~~~~C~~C~~~f~~~~~l~~H~   25 (367)
                      ||-|||.|..|++.|-...++.+|.
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhh
Confidence            4556666666666666666666664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00054  Score=34.01  Aligned_cols=27  Identities=15%  Similarity=0.584  Sum_probs=16.2

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      +||.|..|.+.-...++|..|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            356666666666666666666665544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.93  E-value=0.00028  Score=34.82  Aligned_cols=24  Identities=29%  Similarity=0.541  Sum_probs=14.5

Q ss_pred             cccccc--cccccCCHHHHHHHHHhc
Q psy2876          33 LHKCHL--CTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        33 ~~~C~~--C~~~f~~~~~l~~H~~~h   56 (367)
                      ||+|+.  |++.|..++.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            566664  666666666666665554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00035  Score=38.23  Aligned_cols=26  Identities=23%  Similarity=0.477  Sum_probs=19.2

Q ss_pred             CCCCccCCccccccCChHHHHHHHHH
Q psy2876         169 TSEMHNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       169 ~~~~~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      |.+||.|..|++.|...+++.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            56777777777777777777777643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.88  E-value=0.00042  Score=32.76  Aligned_cols=23  Identities=17%  Similarity=0.498  Sum_probs=12.3

Q ss_pred             ccccccccccCCHHHHHHhHhhhc
Q psy2876         228 FTCIHCGDTLNNAKDYASHLLIIH  251 (367)
Q Consensus       228 ~~C~~C~~~f~~~~~l~~H~~~~H  251 (367)
                      |+|..|..+|..++.|.+|+ ++|
T Consensus         1 ykcglcersfveksalsrhq-rvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQ-RVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHG-GGT
T ss_pred             CcccchHHHHHHHHHHHHHH-Hhh
Confidence            45555555555555555555 444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.00056  Score=33.90  Aligned_cols=27  Identities=19%  Similarity=0.600  Sum_probs=15.7

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      +||+|..|.....+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            356666666666666666666655443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00041  Score=34.39  Aligned_cols=26  Identities=19%  Similarity=0.446  Sum_probs=18.7

Q ss_pred             cccccccccccCCHHHHHHhHhhhcC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      ||+|..|....+..++|..|+...|.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            67777777777777777777766654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.00049  Score=32.50  Aligned_cols=21  Identities=29%  Similarity=0.699  Sum_probs=11.7

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy2876         227 LFTCIHCGDTLNNAKDYASHL  247 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~  247 (367)
                      ||+|..|+..|..+.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            455555555555555555555

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00018  Score=36.63  Aligned_cols=28  Identities=21%  Similarity=0.255  Sum_probs=23.7

Q ss_pred             ccCcccc--ccccccccccccccc-cCCCCC
Q psy2876         308 EDDSCDT--YMDDTTENSNTYLKQ-ETPDNE  335 (367)
Q Consensus       308 ~~~~C~~--c~~~~~~~~~l~~H~-~~h~~~  335 (367)
                      +||.|..  |.+.|+..++-..|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            4788877  899999999999998 998653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.62  E-value=0.00053  Score=34.85  Aligned_cols=26  Identities=27%  Similarity=0.522  Sum_probs=17.7

Q ss_pred             cccccccccccCCHHHHHHHHHhcCC
Q psy2876         201 KHTCDICGEKFINDLKLKAHIKIIHN  226 (367)
Q Consensus       201 ~~~C~~C~~~f~~~~~l~~H~~~~H~  226 (367)
                      ||.|.+|++.|....-|.+|....|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            56677777777777777777665554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.00061  Score=34.61  Aligned_cols=28  Identities=36%  Similarity=0.604  Sum_probs=19.0

Q ss_pred             cccccc--cccccCCHHHHHHhHhhhcCCC
Q psy2876         227 LFTCIH--CGDTLNNAKDYASHLLIIHNIE  254 (367)
Q Consensus       227 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~  254 (367)
                      ||.|.+  |.++|++.++-.+|+.++|..|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CccccCCChhhhhcchhhhhhhccccccCC
Confidence            566766  7777777777777766666543

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.18  E-value=0.0018  Score=34.88  Aligned_cols=26  Identities=19%  Similarity=0.470  Sum_probs=14.2

Q ss_pred             Ccccccc--ccccccCCHHHHHHHHHHh
Q psy2876           3 KTLYKCL--YCHKVFKKSTSFDKHMEHH   28 (367)
Q Consensus         3 ~~~~~C~--~C~~~f~~~~~l~~H~~~h   28 (367)
                      +|||.|.  -|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            4555552  3555555555555555544

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.10  E-value=0.0018  Score=30.61  Aligned_cols=22  Identities=32%  Similarity=0.667  Sum_probs=10.0

Q ss_pred             ccccccccccCCHHHHHHHHHh
Q psy2876         202 HTCDICGEKFINDLKLKAHIKI  223 (367)
Q Consensus       202 ~~C~~C~~~f~~~~~l~~H~~~  223 (367)
                      |.|+.|-+.|..+.++..|++.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            3444444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.08  E-value=0.0013  Score=32.51  Aligned_cols=27  Identities=22%  Similarity=0.459  Sum_probs=15.9

Q ss_pred             ccccccc--cccccCCHHHHHHHHHHhCC
Q psy2876           4 TLYKCLY--CHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         4 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   30 (367)
                      +||.|.+  |.+.|.+...|.+|.-+|+|
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            3555554  66666666666666655554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.93  E-value=0.0026  Score=29.93  Aligned_cols=22  Identities=23%  Similarity=0.677  Sum_probs=11.1

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy2876         201 KHTCDICGEKFINDLKLKAHIK  222 (367)
Q Consensus       201 ~~~C~~C~~~f~~~~~l~~H~~  222 (367)
                      ||+|.-|...|..+.+|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4455555555555555555543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.69  E-value=0.0036  Score=30.87  Aligned_cols=26  Identities=31%  Similarity=0.502  Sum_probs=15.2

Q ss_pred             CccCCc--cccccCChHHHHHHHHHHhc
Q psy2876         172 MHNCDF--CHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       172 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  197 (367)
                      ||.|..  |.+.|.+...|.+|.-+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  66666666666666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0048  Score=33.18  Aligned_cols=27  Identities=30%  Similarity=0.513  Sum_probs=14.9

Q ss_pred             CCCccC--CccccccCChHHHHHHHHHHh
Q psy2876         170 SEMHNC--DFCHLTFTTDNDLIRHMRSHE  196 (367)
Q Consensus       170 ~~~~~C--~~C~~~f~~~~~L~~H~~~h~  196 (367)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            455555  235566666655555555553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0047  Score=29.96  Aligned_cols=22  Identities=18%  Similarity=0.452  Sum_probs=10.9

Q ss_pred             ccccccccccCCHHHHHHHHHh
Q psy2876         202 HTCDICGEKFINDLKLKAHIKI  223 (367)
Q Consensus       202 ~~C~~C~~~f~~~~~l~~H~~~  223 (367)
                      |.||.|+.....+++|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            4455555555555555555443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0051  Score=29.93  Aligned_cols=23  Identities=30%  Similarity=0.499  Sum_probs=14.2

Q ss_pred             ccccccccccCCHHHHHHHHHhc
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~~h   56 (367)
                      -+|+.|.++.+++..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            35666666666666666666655

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.40  E-value=0.0051  Score=29.05  Aligned_cols=25  Identities=24%  Similarity=0.651  Sum_probs=22.5

Q ss_pred             cccccccccccCCHHHHHHhHhhhc
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIH  251 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H  251 (367)
                      .|.|+.|-+.|.++.++..|+..+|
T Consensus         1 vypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcCCchhhHHhccccCceEEEEEec
Confidence            3789999999999999999997666

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.37  E-value=0.0049  Score=29.78  Aligned_cols=21  Identities=24%  Similarity=0.550  Sum_probs=18.6

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy2876         227 LFTCIHCGDTLNNAKDYASHL  247 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~  247 (367)
                      ||+|..||+.+-++.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            688999999999999998886

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.37  E-value=0.0051  Score=29.94  Aligned_cols=25  Identities=20%  Similarity=0.272  Sum_probs=23.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      |-+|+.|.++.+++.+|+.|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999885

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0072  Score=29.28  Aligned_cols=24  Identities=33%  Similarity=0.690  Sum_probs=13.9

Q ss_pred             ccccccccccCCHHHHHHhHhhhc
Q psy2876         228 FTCIHCGDTLNNAKDYASHLLIIH  251 (367)
Q Consensus       228 ~~C~~C~~~f~~~~~l~~H~~~~H  251 (367)
                      |.|+.|+-...++++|..|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            456666666666666666654444

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.62  E-value=0.015  Score=28.04  Aligned_cols=21  Identities=19%  Similarity=0.524  Sum_probs=12.1

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHM   25 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~   25 (367)
                      ||+|..||+.|..+..|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            455666666655555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.38  E-value=0.013  Score=33.03  Aligned_cols=25  Identities=28%  Similarity=0.664  Sum_probs=19.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      .|.|..|++.|+....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5778888888888888888877764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.024  Score=31.99  Aligned_cols=24  Identities=33%  Similarity=0.649  Sum_probs=19.4

Q ss_pred             CccCCccccccCChHHHHHHHHHH
Q psy2876         172 MHNCDFCHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       172 ~~~C~~C~~~f~~~~~L~~H~~~h  195 (367)
                      .|.|..|++.|+....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            477888888888888888887776

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.46  E-value=0.021  Score=29.21  Aligned_cols=22  Identities=32%  Similarity=0.555  Sum_probs=11.5

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy2876         201 KHTCDICGEKFINDLKLKAHIK  222 (367)
Q Consensus       201 ~~~C~~C~~~f~~~~~l~~H~~  222 (367)
                      .|.|+-||..|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3555555555555555555543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.018  Score=29.75  Aligned_cols=25  Identities=28%  Similarity=0.518  Sum_probs=20.8

Q ss_pred             cccccccccccCCHHHHHHhHhhhcC
Q psy2876         227 LFTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       227 ~~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      .|.|..|++.|.+...+.+|. ..-.
T Consensus         4 afvcskcgktftrrntm~rha-~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHA-DNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHH-HHCC
T ss_pred             eeeecccccchhcchHHHHHh-hhcC
Confidence            588999999999999999997 4433

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.77  E-value=0.05  Score=26.68  Aligned_cols=25  Identities=40%  Similarity=0.818  Sum_probs=17.2

Q ss_pred             ccccccccccCCHHHHHHhHhhhcC
Q psy2876         228 FTCIHCGDTLNNAKDYASHLLIIHN  252 (367)
Q Consensus       228 ~~C~~C~~~f~~~~~l~~H~~~~H~  252 (367)
                      |.|..||+..++...++.|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            5677777777777777777655554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.48  E-value=0.071  Score=27.46  Aligned_cols=26  Identities=19%  Similarity=0.577  Sum_probs=18.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHNR   30 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~~   30 (367)
                      .|.|..|++.|.....+.+|.....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46777777777777777777666554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.33  E-value=0.064  Score=27.32  Aligned_cols=19  Identities=26%  Similarity=0.558  Sum_probs=9.6

Q ss_pred             ccCCccccccCChHHHHHH
Q psy2876         173 HNCDFCHLTFTTDNDLIRH  191 (367)
Q Consensus       173 ~~C~~C~~~f~~~~~L~~H  191 (367)
                      |.|+.||..|++.+.|..|
T Consensus         9 f~c~pcgirfss~stleah   27 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHH
T ss_pred             eeccccceeecChhHHHhh
Confidence            4455555555555555444

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.84  E-value=0.099  Score=25.36  Aligned_cols=18  Identities=39%  Similarity=0.809  Sum_probs=8.1

Q ss_pred             cccccCCHHHHHHHHHhc
Q psy2876          39 CTKAYPSEKNLDRHLLTH   56 (367)
Q Consensus        39 C~~~f~~~~~l~~H~~~h   56 (367)
                      |++.|.+.+.++.|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            444444444444444433

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.69  E-value=0.088  Score=27.48  Aligned_cols=19  Identities=32%  Similarity=0.429  Sum_probs=11.3

Q ss_pred             cccCChHHHHHHHHHHhcc
Q psy2876         180 LTFTTDNDLIRHMRSHEEY  198 (367)
Q Consensus       180 ~~f~~~~~L~~H~~~h~~~  198 (367)
                      +.|.....|..|+|+|+++
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            3466666666666666653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.43  E-value=0.16  Score=24.81  Aligned_cols=21  Identities=29%  Similarity=0.629  Sum_probs=12.3

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy2876          34 HKCHLCTKAYPSEKNLDRHLL   54 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~~   54 (367)
                      |.|..|++..++...+.-|+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEe
Confidence            556666666666666665543

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.12  E-value=0.074  Score=27.78  Aligned_cols=20  Identities=25%  Similarity=0.348  Sum_probs=15.1

Q ss_pred             ccccCCHHHHHHHHHHhCCC
Q psy2876          12 HKVFKKSTSFDKHMEHHNRN   31 (367)
Q Consensus        12 ~~~f~~~~~l~~H~~~h~~~   31 (367)
                      ++.|.....|..||+.|+||
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45678888888888888775

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.96  E-value=0.14  Score=25.46  Aligned_cols=26  Identities=23%  Similarity=0.538  Sum_probs=15.7

Q ss_pred             CccCCc--cccccCChHHHHHHHHHHhc
Q psy2876         172 MHNCDF--CHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       172 ~~~C~~--C~~~f~~~~~L~~H~~~h~~  197 (367)
                      .|.|..  |+..|...+.|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            355543  66666666666666666655

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.86  E-value=0.055  Score=33.20  Aligned_cols=34  Identities=24%  Similarity=0.610  Sum_probs=15.1

Q ss_pred             cccccccccccCCHHHHHHHHHhcCCCCceecccccc
Q psy2876          33 LHKCHLCTKAYPSEKNLDRHLLTHNVRRSFRCKSCGR   69 (367)
Q Consensus        33 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   69 (367)
                      .|.|+.|++.|+....+.   ..-.....|.|..|+.
T Consensus        14 ~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          14 SFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHT   47 (62)
T ss_dssp             EEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCC
T ss_pred             ceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCC
Confidence            455555555554333222   1222233455555543

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.54  E-value=0.13  Score=24.91  Aligned_cols=23  Identities=30%  Similarity=0.813  Sum_probs=19.5

Q ss_pred             cccc--cccccCCHHHHHHHHHHhC
Q psy2876           7 KCLY--CHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         7 ~C~~--C~~~f~~~~~l~~H~~~h~   29 (367)
                      .|+.  |++.|...+++++|+-+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            3554  9999999999999998874

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.36  E-value=0.29  Score=27.30  Aligned_cols=26  Identities=27%  Similarity=0.599  Sum_probs=15.3

Q ss_pred             CcceeccccccccCCHHHHHHHHHHh
Q psy2876         142 SEVHKCLYCFKVFVHKAHLDKHLILH  167 (367)
Q Consensus       142 ~~~~~C~~C~~~f~~~~~l~~H~~~h  167 (367)
                      +.|-.|++|+.......+|++|+..-
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~   47 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELR   47 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            44556666666666666666665543

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.56  E-value=0.11  Score=28.18  Aligned_cols=27  Identities=22%  Similarity=0.525  Sum_probs=17.0

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCCccccccccccc
Q psy2876           3 KTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKA   42 (367)
Q Consensus         3 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   42 (367)
                      ++.|.|..||..+.             ++.|-.|++|+..
T Consensus         3 ~~~~~C~vCG~i~~-------------g~~P~~CPvCg~~   29 (37)
T d1nnqa2           3 KKVYICPICGYTAV-------------DEAPEYCPVCGAP   29 (37)
T ss_dssp             SCEEECTTTCCEEE-------------SCCCSBCTTTCCB
T ss_pred             CcEEECCCCCCEec-------------CCCCCcCCCCCCc
Confidence            45677777777663             3456667777653

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.23  E-value=0.2  Score=25.83  Aligned_cols=23  Identities=26%  Similarity=0.745  Sum_probs=12.7

Q ss_pred             ccccccccccccCCHHHHHHHHH
Q psy2876           4 TLYKCLYCHKVFKKSTSFDKHME   26 (367)
Q Consensus         4 ~~~~C~~C~~~f~~~~~l~~H~~   26 (367)
                      -.|.|.+|.++|...+.+-+|..
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHH
Confidence            34555555555555555555543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.03  E-value=0.14  Score=31.38  Aligned_cols=34  Identities=26%  Similarity=0.513  Sum_probs=16.0

Q ss_pred             CceecccccccccCHHHHHHHHHHhcCccccccccc
Q psy2876          60 RSFRCKSCGRRFESEELLIVHQVIHERKFHKCTQCE   95 (367)
Q Consensus        60 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~   95 (367)
                      ..|.|+.|+++|+....+..  .......|.|..|+
T Consensus        13 ~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~   46 (62)
T d1vd4a_          13 ASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCH   46 (62)
T ss_dssp             SEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSC
T ss_pred             CceECCCCCCCcchhhHHHh--cCcCCCeEEecCCC
Confidence            44566666666554443321  12224445555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.79  E-value=0.24  Score=24.63  Aligned_cols=20  Identities=35%  Similarity=0.552  Sum_probs=10.0

Q ss_pred             cccccCCHHHHHHHHHhcCC
Q psy2876          39 CTKAYPSEKNLDRHLLTHNV   58 (367)
Q Consensus        39 C~~~f~~~~~l~~H~~~h~~   58 (367)
                      |+..|...-.|..|+-.|+|
T Consensus        11 C~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHHC
T ss_pred             cchhhccchhhhHHhhhhcC
Confidence            55555555555555544443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=86.41  E-value=0.33  Score=27.06  Aligned_cols=25  Identities=28%  Similarity=0.514  Sum_probs=13.8

Q ss_pred             CccccccccccccCCHHHHHHHHHh
Q psy2876          31 NVLHKCHLCTKAYPSEKNLDRHLLT   55 (367)
Q Consensus        31 ~~~~~C~~C~~~f~~~~~l~~H~~~   55 (367)
                      +.|-.|++|+.......+|++|+..
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHH
Confidence            3445555555555555555555544

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.23  Score=29.98  Aligned_cols=27  Identities=22%  Similarity=0.578  Sum_probs=19.7

Q ss_pred             CCccCCccccccCChHHHHHHHHHHhc
Q psy2876         171 EMHNCDFCHLTFTTDNDLIRHMRSHEE  197 (367)
Q Consensus       171 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  197 (367)
                      ..|+|..|...|.+...|..|+..|..
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhccH
Confidence            457777777777777777777777643

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.65  E-value=0.35  Score=22.99  Aligned_cols=18  Identities=39%  Similarity=0.571  Sum_probs=10.0

Q ss_pred             cccccCChHHHHHHHHHH
Q psy2876         178 CHLTFTTDNDLIRHMRSH  195 (367)
Q Consensus       178 C~~~f~~~~~L~~H~~~h  195 (367)
                      |++.|.....|..|+-+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            555555555555555544

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=85.55  E-value=0.18  Score=27.03  Aligned_cols=28  Identities=21%  Similarity=0.617  Sum_probs=17.6

Q ss_pred             CCccccccccccccCCHHHHHHHHHHhCCCccccccccccc
Q psy2876           2 EKTLYKCLYCHKVFKKSTSFDKHMEHHNRNVLHKCHLCTKA   42 (367)
Q Consensus         2 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   42 (367)
                      +++.|.|.+||.+..             ++.|-+|++|+..
T Consensus         2 ~~~~~vC~vCGyi~~-------------g~~Pe~CPvCg~~   29 (36)
T d1yuza2           2 DDKFHLCPICGYIHK-------------GEDFEKCPICFRP   29 (36)
T ss_dssp             SCCEEECSSSCCEEE-------------SSCCSBCTTTCCB
T ss_pred             CCCEEECCCCCCEee-------------CCCCCcCCCCCCc
Confidence            355677777777654             3445667777653

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.25  E-value=0.33  Score=29.26  Aligned_cols=25  Identities=24%  Similarity=0.678  Sum_probs=14.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy2876           5 LYKCLYCHKVFKKSTSFDKHMEHHN   29 (367)
Q Consensus         5 ~~~C~~C~~~f~~~~~l~~H~~~h~   29 (367)
                      .|+|..|+..|-+...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            4556666666655555655555553

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.39  E-value=0.087  Score=32.87  Aligned_cols=23  Identities=35%  Similarity=0.677  Sum_probs=15.2

Q ss_pred             CccCCccccccCChHHHHHHHHH
Q psy2876         172 MHNCDFCHLTFTTDNDLIRHMRS  194 (367)
Q Consensus       172 ~~~C~~C~~~f~~~~~L~~H~~~  194 (367)
                      .|.|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            36677777777777777766653

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.81  E-value=0.58  Score=24.02  Aligned_cols=21  Identities=24%  Similarity=0.673  Sum_probs=9.6

Q ss_pred             ceeccccccccCCHHHHHHHH
Q psy2876         144 VHKCLYCFKVFVHKAHLDKHL  164 (367)
Q Consensus       144 ~~~C~~C~~~f~~~~~l~~H~  164 (367)
                      .|.|.+|.+.+...+++-+|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHH
Confidence            344444444444444444444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.16  Score=31.65  Aligned_cols=20  Identities=30%  Similarity=0.818  Sum_probs=10.5

Q ss_pred             ccccccccccCCHHHHHHHH
Q psy2876          34 HKCHLCTKAYPSEKNLDRHL   53 (367)
Q Consensus        34 ~~C~~C~~~f~~~~~l~~H~   53 (367)
                      |-|..|++.|.+...|..|+
T Consensus        16 fYCv~C~K~F~se~~l~~H~   35 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHF   35 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHT
T ss_pred             EecccccCccCCHHHHHHHH
Confidence            44555555555555555554