Psyllid ID: psy2973

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
Protein Sequence
MMMCKKEIKNTTKFTPVSDESQIQFAMQVPKKEEETLEDGLDQSTLENDRIIDTAHIKGETLKPNVIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLSH
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEEcccccccccccccccccccEEEEcccEEEEEEccccccccEEccccccccccccccEEcccccHHHHccccccccccEcccccccEEEcccccEEHEEEccccccccccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHHcHHHHccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccEccccHHHHHHHccccccccccccccEcccccHHHHEccccccEEcccccccccccccccEccccHHHHHHHcccccccccccccccEccccHHHHHEEEEEccccccccccccccccEccccHHHHHHHHcccccccccccccHccccEccccHHHHHHHHccccccHccccEccccHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mmmckkeiknttkftpvsdeSQIQFAMQVPkkeeetledgldqstlendriidtahikgetlkpnVIKVRIKkkrgeprkanpqelytpdffqslfgfsifdcqdsewRDVLKKKQGVLHlkangsrihypsektdvKQLRLDKMKSFTKKLHtrkyndkfsfgenkfkcqfcpmwfeqrgkrrkhvngvhlKIKRfkcevcpmkfhrQVSLKKHVEAVhlklkpckcevcgksfsnnstlkvhstthadqgrfkcpicgkhirhkqtfddhmnmhsgdvkytCTYCEKSFLYKKSLKHHLfvhsseftskcsvcdrlyksdylrrkhershssifqCRICDKILSNIQGIRRHMenmhnsdkdnterpfqcndcgstfrLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILtkhsgpnykawkcekcdmrfvtnknLKRHMKVHEKNrnmldsscnecgkqykWESFLQKHKKIctttckscgkrysSIYVLRNHVkscygqqknlsh
Flexible Loop (DISEMBL)
mmmckkeiknttkftpvsdesqIQFAMQVPKKEEETLedgldqstlendriidtahikgetlkpnvikvrikkkrgeprkanpqelyTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLhlkangsrihypsektdvkqlrlDKMKSftkklhtrkyndkfsfgenkFKCQFCPMWFEQrgkrrkhvngvhlkikrfkcevcpMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLkvhstthadqgrfKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHsseftskcsvcdRLYKSDYlrrkhershssifqcricDKILSNIQGIRRHMENMhnsdkdnterpfQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKhsgpnykawkcEKCDMRFVTNKNLKRHMkvheknrnmldsSCNECGKQYKWESFLQKHKKICtttckscgkrYSSIYVLRnhvkscygqqknlsh
Low Complexity Region (SEG)
MMMCKKEIKNTTKFTPVSDESQIQFAMQVPKKEEETLEDGLDQSTLENDRIIDTAHIKGETLKPNVIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLSH
Disordered region (IsUnstruct)
**************************************************IIDTAHIKGETLKPNVIKVR***************LYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHY****************SFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIR*****************FQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH****NMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYG*******
Disordered Region (DISOPRED)
*******IKNTTKFTP**************************************************************RKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLS*
Disordered Region (DISEMBL)
MMMCKKEIKNTTKFTPVSDESQIQFA***************DQSTLENDRIIDTAHIKGETLKPNVIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLR*********IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLSH
Disordered Region (DISPRO)
MMMCKKEIKNTTKFTPVSDESQIQFAMQVPKKEEETLEDGLDQSTLENDRIIDTAHIKGETLKPNVIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKN*S*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMMCKKEIKNTTKFTPVSDESQIQFAMQVPKKEEETLEDGLDQSTLENDRIIDTAHIKGETLKPNVIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANGSRIHYPSEKTDVKQLRLDKMKSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLSH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	514	2.2.26 [Sep-21-2011]
Q96MU6	729	Zinc finger protein 778 O	yes	N/A	0.632	0.445	0.318	5e-41
Q05481	1191	Zinc finger protein 91 OS	no	N/A	0.628	0.271	0.320	3e-39
P0DKX0	622	Zinc finger protein 728 O	no	N/A	0.628	0.519	0.312	7e-38
A8MXY4	1036	Zinc finger protein 99 OS	no	N/A	0.630	0.312	0.315	8e-38
Q86WZ6	799	Zinc finger protein 227 O	no	N/A	0.661	0.425	0.326	2e-37
Q9UK10	706	Zinc finger protein 225 O	no	N/A	0.645	0.470	0.316	3e-37
Q14588	700	Zinc finger protein 234 O	no	N/A	0.628	0.461	0.326	3e-37
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.628	0.275	0.320	4e-37
P10076	861	Zinc finger protein 26 OS	no	N/A	0.632	0.377	0.301	4e-37
Q9NYT6	803	Zinc finger protein 226 O	no	N/A	0.661	0.423	0.307	6e-37

>sp|Q96MU6|ZN778_HUMAN Zinc finger protein 778 OS=Homo sapiens GN=ZNF778 PE=2 SV=3

 Score =  169 bits (428), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 362 EKPFACVVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 419

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 420 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYEC 479

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H+  H+ E   +C  C + Y   YL  +H ++H+    F C +C 
Sbjct: 480 KQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCR 539

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 540 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECK 592

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 593 VCGKAFTTSSHLIVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYI--- 646

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L KH +I T      CK CGK Y+  Y+L+ H+K+
Sbjct: 647 CNECGKAFRASSHLHKHGRIHTGQKPYKCKECGKAYNRFYLLKEHLKT 694

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  163 bits (413), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 164/346 (47%), Gaps = 23/346 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  +KC+ C   F Q     KH   +H   K +K E C   F + ++L KH + +H + 
Sbjct: 486 GEKPYKCEECGKAFRQSSTLTKH-KIIHTGEKPYKFEECGKAFRQSLTLNKH-KIIHSRE 543

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KC+ CGK+F   STL  H   HA +  +KC  CGK   H  +   H  +H+G+  Y 
Sbjct: 544 KPYKCKECGKAFKQFSTLTTHKIIHAGKKLYKCEECGKAFNHSSSLSTHKIIHTGEKSYK 603

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
           C  C K+FL+  +L+ H  +H+ E   KC  C + +       KH+R H+    ++C+ C
Sbjct: 604 CEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFSHSSALAKHKRIHTGEKPYKCKEC 663

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSH--INRLHKLKLNC 399
            K  SN   +  H            E+P++C +C  TF+    L  H  I+   KL   C
Sbjct: 664 GKAFSNSSTLANHKIT------HTEEKPYKCKECDKTFKRLSTLTKHKIIHAGEKL-YKC 716

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C   F     L  H    H+G   K +KCE+C   F  + +L +H ++H + +     
Sbjct: 717 EECGKAFNRSSNLTIHKFI-HTGE--KPYKCEECGKAFNWSSSLTKHKRIHTREKPF--- 770

Query: 460 SCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNH 501
            C ECGK + W S L +HK+I T      C+ CGK +S    L  H
Sbjct: 771 KCKECGKAFIWSSTLTRHKRIHTGEKPYKCEECGKAFSRSSTLTKH 816

Homo sapiens (taxid: 9606)

>sp|P0DKX0|ZN728_HUMAN Zinc finger protein 728 OS=Homo sapiens GN=ZNF728 PE=4 SV=1

 Score =  159 bits (401), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 163/346 (47%), Gaps = 23/346 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  +KC+ C   F +      H   +H   K +KCE C   F+R  +L +H + +H   
Sbjct: 280 GEKPYKCEECGKAFSKASTLTAHKT-IHAGEKPYKCEECGKAFNRSSNLMEH-KRIHTGE 337

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KPCKCE CGK+F N STL  H   H  +  +KC  CGK      +  +H  +H+GD  Y 
Sbjct: 338 KPCKCEECGKAFGNFSTLTKHKVIHTGEKPYKCEECGKAFSWPSSLTEHKRIHAGDKPYK 397

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSI--FQCRIC 341
           C  C K+F +  +L  H  +H+ E   KC  C + + +     KH+  H+    ++C  C
Sbjct: 398 CEECGKTFKWSSTLTKHKIIHTGEKPYKCEECGKAFTTFSSLTKHKVIHTGEKHYKCEEC 457

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNC 399
            K+ S    +  H + +H       E+ ++C +CG  F+   +L  H  R+H  +    C
Sbjct: 458 GKVFSWSSSLTTH-KAIHAG-----EKLYKCEECGKAFKWSSNLMEH-KRIHTGEKPYKC 510

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C   F+    L  H +  H+G   K +KCE+C   F+ +  L  H ++H   +     
Sbjct: 511 EECGKAFSKVANLTKHKVI-HTGE--KQYKCEECGKAFIWSSRLSEHKRIHTGEKPY--- 564

Query: 460 SCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNH 501
            C ECGK + W S L KHKKI        C+ CGK ++    L  H
Sbjct: 565 KCEECGKAFSWVSVLNKHKKIHAGKKFYKCEECGKDFNQSSHLTTH 610

Homo sapiens (taxid: 9606)

>sp|A8MXY4|ZNF99_HUMAN Zinc finger protein 99 OS=Homo sapiens GN=ZNF99 PE=2 SV=2

 Score =  158 bits (400), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 166/345 (48%), Gaps = 21/345 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           G+  +KC+ C   F+Q     +H   +H   K +KCE C   F+   +L+KH + +H   
Sbjct: 190 GKKPYKCEECGKAFKQSSHLTRH-KAIHTGEKPYKCEECGKAFNHFSALRKH-QIIHTGK 247

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KCE CGK+FS +STL+ H   H ++  +K   CGK   +      H  +H+G   Y 
Sbjct: 248 KPYKCEECGKAFSQSSTLRKHEIIHTEEKPYKYEECGKAFSNLSALRKHEIIHTGQKPYK 307

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
           C  C K+F +   L  H  +H++E   KC  C + +K     RKH+  H+    ++C  C
Sbjct: 308 CEECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKAFKRFSALRKHKIIHTGKQPYKCEEC 367

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSH-INRLHKLKLNCV 400
            K  SN   +R+H E +H       E+P++C +CG  F+    L  H +  + +    C 
Sbjct: 368 SKAFSNFSALRKH-EIIHTG-----EKPYKCEECGKAFKWSSKLTVHKVIHMEEKPCKCE 421

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   F +   L  H +  H+G   K +KCE+C   F  +  L +H  +H   +      
Sbjct: 422 ECGKAFKHFSALRKHKII-HTGK--KPYKCEECGKAFNNSSTLMKHKIIHTGKKPY---K 475

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNH 501
           C ECGK +K  S L +HK I T      C+ CGK ++    LR H
Sbjct: 476 CEECGKAFKQSSHLTRHKAIHTGEKPYKCEECGKAFNHFSALRKH 520

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q86WZ6|ZN227_HUMAN Zinc finger protein 227 OS=Homo sapiens GN=ZNF227 PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 159/364 (43%), Gaps = 24/364 (6%)

Query: 146 KSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMK 205
           K FT+  H    + +   GE  +KC  C   F        H   VH   K +KCE C   
Sbjct: 415 KGFTQAAHFH-IHQRVHTGEKPYKCDVCGKGFSHNSPLICHRR-VHTGEKPYKCEACGKG 472

Query: 206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH 265
           F R   L  H   VH   KP KC+ CGK FS  S L+VH   H  + RFKC  CGK    
Sbjct: 473 FTRNTDLHIHFR-VHTGEKPYKCKECGKGFSQASNLQVHQNVHTGEKRFKCETCGKGFSQ 531

Query: 266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLR 325
                 H  +H+G+  Y C  C K F Y  +LK H  +H+ E   KC  C + +      
Sbjct: 532 SSKLQTHQRVHTGEKPYRCDVCGKDFSYSSNLKLHQVIHTGEKPYKCEECGKGFSWRSNL 591

Query: 326 RKHERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
             H+R HS    ++C  CDK  S     R H + +H       E+P++C  CG  F    
Sbjct: 592 HAHQRVHSGEKPYKCEQCDKSFSQAIDFRVH-QRVHTG-----EKPYKCGVCGKGFSQSS 645

Query: 384 HLNSHINRLHKLK--LNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNK 441
            L SH  R+H  +    C  C   F    +  YH    H+G   K +KCE+C   F  + 
Sbjct: 646 GLQSH-QRVHTGEKPYKCDVCGKGFRYSSQFIYH-QRGHTGE--KPYKCEECGKGFGRSL 701

Query: 442 NLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYV 497
           NL+ H +VH   +  +   C ECGK +   S L+ H  + T      C+ CGK +S    
Sbjct: 702 NLRHHQRVHTGEKPHI---CEECGKAFSLPSNLRVHLGVHTREKLFKCEECGKGFSQSAR 758

Query: 498 LRNH 501
           L  H
Sbjct: 759 LEAH 762

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UK10|ZN225_HUMAN Zinc finger protein 225 OS=Homo sapiens GN=ZNF225 PE=2 SV=2

 Score =  157 bits (396), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 173/382 (45%), Gaps = 50/382 (13%)

Query: 164 GENKFKCQFCPMWFEQRGK---RRKHVNGV------------------------HLKIKR 196
           GE  FKC+ C   F +R      RK   GV                        H   K 
Sbjct: 228 GEKPFKCEQCGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIHDSQLQEHQRIHTGEKP 287

Query: 197 FKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           FKC++C   F  + +L +H   VH++ KP +C+ CGKSF   S L  H   H  + R+KC
Sbjct: 288 FKCDICCKSFRSRANLNRH-SMVHMREKPFRCDTCGKSFGLKSALNSHRMVHTGEKRYKC 346

Query: 257 PICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCD 316
             CGK   ++Q    H   H+G+  Y C  C KSF +   L  H+ VHS E T KC  C 
Sbjct: 347 EECGKRFIYRQDLYKHQIDHTGEKPYNCKECGKSFRWASGLSRHVRVHSGETTFKCEECG 406

Query: 317 RLYKSDYLRRKHERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCND 374
           + + ++  R  H+R+HS    ++C  C K      G +R ++   +      E+P+ C +
Sbjct: 407 KGFYTNSQRYSHQRAHSGEKPYRCEECGK------GYKRRLDLDFHQRVHRGEKPYNCKE 460

Query: 375 CGSTFRLKRHLNSHINRLHKLK--LNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEK 432
           CG +F     L +H  R+H  +    C  C   FT   +L  H    HSG   K +KCE+
Sbjct: 461 CGKSFGWASCLLNH-QRIHSGEKPFKCEECGKRFTQNSQLYTHRRV-HSGE--KPFKCEE 516

Query: 433 CDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSC 488
           C  RF  N  L  H +VH     +    C ECGK +  +  L  H+++ T      CK C
Sbjct: 517 CGKRFTQNSQLYSHRRVHT---GVKPYKCEECGKGFNSKFNLDMHQRVHTGERPYNCKEC 573

Query: 489 GKRYSSIYVLRNHVKSCYGQQK 510
           GK +S    + NH K  +G +K
Sbjct: 574 GKSFSRASSILNH-KRLHGDEK 594

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14588|ZN234_HUMAN Zinc finger protein 234 OS=Homo sapiens GN=ZNF234 PE=2 SV=3

 Score =  157 bits (396), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/346 (32%), Positives = 163/346 (47%), Gaps = 23/346 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  FKC  C   F +R     H   VH   K +KCE C   F    +L+ H + VH   
Sbjct: 284 GEKPFKCDTCGKNFRRRSALNNHCM-VHTGEKPYKCEDCGKCFTCSSNLRIH-QRVHTGE 341

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KCE CGK F   S  + H   H  +  + C +CGK   +  +F  H  +H+G+  Y 
Sbjct: 342 KPYKCEECGKCFIQPSQFQAHRRIHTGEKPYVCKVCGKGFIYSSSFQAHQGVHTGEKPYK 401

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS--SIFQCRIC 341
           C  C KSF  K   + HL VH+ E   KC VC + ++     + H ++HS    F+C  C
Sbjct: 402 CNECGKSFRMKIHYQVHLVVHTGEKPYKCEVCGKAFRQSSYLKIHLKAHSVQKPFKCEEC 461

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNC 399
            +  +    ++ H + +H       E+P++C +CG  F  +  L  H  R+H  +   NC
Sbjct: 462 GQGFNQSSRLQIH-QLIHTG-----EKPYKCEECGKGFSRRADLKIHC-RIHTGEKPYNC 514

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C  +F+    L  H    HSG   K +KCE+C   F  + +L+ H KVH   +     
Sbjct: 515 EECGKVFSQASHLLTHQRV-HSGE--KPFKCEECGKSFSRSAHLQAHQKVHTGEKPY--- 568

Query: 460 SCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNH 501
            C ECGK +KW   L  H+++ T     TC  CGK +S    L+ H
Sbjct: 569 KCGECGKGFKWSLNLDMHQRVHTGEKPYTCGECGKHFSQASSLQLH 614

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  156 bits (394), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 163/346 (47%), Gaps = 23/346 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           G+  +KC+ C   F       KH   +H   K +KCE C   F +   L +H +A+H   
Sbjct: 428 GKKPYKCEECGKAFNSSSTLMKH-KIIHTGEKPYKCEECGKAFRQSSHLTRH-KAIHTGE 485

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KCE CGK+F++ S L+ H   H  +  +KC  CGK      T  +H  +H+G+  Y 
Sbjct: 486 KPYKCEECGKAFNHFSDLRRHKIIHTGKKPYKCEECGKAFSQSSTLRNHQIIHTGEKPYK 545

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS--SIFQCRIC 341
           C  C K+F +   L  H  +H+ E   KC  C + +K     RKH+  H+   +++C  C
Sbjct: 546 CEECGKAFKWSSKLTVHKVIHTGEKPCKCEECGKAFKHFSALRKHKVIHTREKLYKCEEC 605

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNC 399
            K  +N   + +H + +H   K     P++C +CG  FR   HL  H   +H  +    C
Sbjct: 606 GKAFNNSSILAKH-KIIHTGKK-----PYKCEECGKAFRQSSHLTRH-KAIHTGEKPYKC 658

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C   F++   L  H +  H+G   K +KCE+C   F     L+RH  +H   +     
Sbjct: 659 EECGKAFSHFSALRRHKII-HTGK--KPYKCEECGKAFSHFSALRRHKIIHTGEKPY--- 712

Query: 460 SCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNH 501
            C ECGK +KW S L  HK I T      C+ CGK +     LR H
Sbjct: 713 KCEECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKSFKHFSALRKH 758

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  156 bits (394), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  ++C+ C   F Q  +  +H+   H   K ++C+ C   F     L  H+   H   K
Sbjct: 299 EKSYECKECGKTFIQPSRLTEHMRS-HTGEKPYQCDQCGNAFASSSYLTTHLR-THTGEK 356

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P +C +CGK+F+ +S L  H  TH  +  ++C +CGK    +     H+  H+G+  Y C
Sbjct: 357 PFECNICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPC 416

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSI--FQCRICD 342
           T CEK+F     L  H+  H+ E   +C VC R +++    + H R H+ I  ++C  C 
Sbjct: 417 TECEKAFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKPYKCNYCG 476

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K  +   G+ +H+  +HN      E+P++C +CG  F     L  HI R+H  +    C 
Sbjct: 477 KAFTARSGLTKHV-LIHNG-----EKPYECKECGKAFSTSSGLVEHI-RIHTGEKPFECY 529

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C     +   L  H+ T H+G   K ++C +CD  F  +  L+ HM+ H   +      
Sbjct: 530 QCGKALAHSSSLVGHLRT-HTGE--KPFECNQCDKTFTRSSYLRIHMRTHTGEKPY---E 583

Query: 461 CNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVKS 504
           C ECGK +   S L KH +  T      CK CGK + S   L  H+K+
Sbjct: 584 CKECGKTFPERSCLTKHIRTHTGERPYECKECGKGFISFAQLTVHIKT 631

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9NYT6|ZN226_HUMAN Zinc finger protein 226 OS=Homo sapiens GN=ZNF226 PE=1 SV=2

 Score =  155 bits (393), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 170/364 (46%), Gaps = 24/364 (6%)

Query: 146 KSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMK 205
           ++F++  H + +  +   GE  FKC  C   F +    + H   VH   K +KCE C   
Sbjct: 370 RAFSQASHLQDHQ-RLHTGEKPFKCDACGKSFSRNSHLQSHQR-VHTGEKPYKCEECGKG 427

Query: 206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH 265
           F    +L  H + VH   KP KCE CGK FS  S+L+ H   H  +  + C +CGK    
Sbjct: 428 FICSSNLYIH-QRVHTGEKPYKCEECGKGFSRPSSLQAHQGVHTGEKSYICTVCGKGFTL 486

Query: 266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLR 325
                 H  +H+G+  Y C  C KSF      + HL VH+ E   KC +C + +      
Sbjct: 487 SSNLQAHQRVHTGEKPYKCNECGKSFRRNSHYQVHLVVHTGEKPYKCEICGKGFSQSSYL 546

Query: 326 RKHERSHS--SIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
           + H+++HS    F+C  C +  +    ++ H + +H       E+P++C +CG  F  + 
Sbjct: 547 QIHQKAHSIEKPFKCEECGQGFNQSSRLQIH-QLIHTG-----EKPYKCEECGKGFSRRA 600

Query: 384 HLNSHINRLHKLK--LNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNK 441
            L  H  R+H  +   NC  C  +F     L  H    HSG   K +KCE+C   F  + 
Sbjct: 601 DLKIHC-RIHTGEKPYNCEECGKVFRQASNLLAHQRV-HSGE--KPFKCEECGKSFGRSA 656

Query: 442 NLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYV 497
           +L+ H KVH  ++      C+ECGK +KW   L  H+++ T      C  CGK +S    
Sbjct: 657 HLQAHQKVHTGDKPY---KCDECGKGFKWSLNLDMHQRVHTGEKPYKCGECGKYFSQASS 713

Query: 498 LRNH 501
           L+ H
Sbjct: 714 LQLH 717

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	514
326680530	786	PREDICTED: zinc finger protein 91-like [	0.867	0.567	0.287	1e-43
348522439	567	PREDICTED: zinc finger protein 250-like	0.591	0.536	0.352	7e-42
326676493	689	PREDICTED: zinc finger protein 845-like	0.632	0.471	0.316	3e-40
260785163	554	hypothetical protein BRAFLDRAFT_267706 [	0.640	0.593	0.314	4e-40
432912003	572	PREDICTED: zinc finger protein 726-like	0.645	0.580	0.313	6e-40
355710485	729	hypothetical protein EGK_13120 [Macaca m	0.632	0.445	0.324	1e-39
355757048	729	hypothetical protein EGM_12072 [Macaca f	0.632	0.445	0.324	1e-39
297284779	622	PREDICTED: zinc finger protein 778-like,	0.632	0.522	0.324	3e-39
114664134	728	PREDICTED: zinc finger protein 778 isofo	0.632	0.446	0.318	3e-39
153792259	729	zinc finger protein 778 isoform 2 [Homo	0.632	0.445	0.318	3e-39

>gi|326680530|ref|XP_002661836.2| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 234/519 (45%), Gaps = 73/519 (14%)

Query: 6   KEIKNTTKFTPVSDESQIQFAMQVPKKEEETLEDGLDQSTLENDRIIDTAHIKGETLKPN 65
           +++K    F+   ++ Q Q  + V K+E   L    ++   E  ++I T        KP 
Sbjct: 9   EDVKIEETFSVKHEDLQEQTDLMVLKEETHQLNVMEEKQQFEKHQVITTDE------KPT 62

Query: 66  VIKVRIKKKRGEPRKANPQELYTPDFFQSLFGFSIFDCQDSEWRDVLKKKQGVLHLKANG 125
           + K      RG PRK+           +S+  +S   C+ S      KK    +H+    
Sbjct: 63  LTKK--TSSRGRPRKS-----------KSMCNYSCTRCRKS----FSKKSNLDIHM---- 101

Query: 126 SRIHYPSEKTDVKQL--RLDKMKSFTK--KLHTRKYNDKFSFGENKFKCQFCPMWFEQRG 181
            R+H   +    KQ   R   ++ F    ++HT         GE  + CQ C   F   G
Sbjct: 102 -RVHTKEKPYTCKQCGKRFGYIQGFENHMRIHT---------GERPYTCQQCGKSFYHAG 151

Query: 182 KRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTL 241
               H   +H   +++ C+ C   F +  +L  H+  +H   KP  C  CGKSF  N TL
Sbjct: 152 NFAAHQR-IHTGERKYTCQHCGKSFSKTGNLAVHMR-IHTGEKPYSCSQCGKSFKQNVTL 209

Query: 242 KVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHL 301
           K+H  TH ++  F C  CGK I  K   D HM +H+G+  YTCT C KSF YK SL HH+
Sbjct: 210 KIHMRTHNEERIFTCTQCGKSISQKHYLDIHMRIHTGEKPYTCTECGKSFPYKGSLNHHM 269

Query: 302 FVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICDKILSNIQGIRRHMENMH 359
             H+ E    C+ C + + +      H   H+   +F C  C K L+    +++HM+   
Sbjct: 270 ISHTGEKPFTCAQCGKSFTTKTSLMNHMDGHTGTIVFTCDQCGKSLTRKDSMKQHMKT-- 327

Query: 360 NSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK-----------LNCVHCQAIFTN 408
                + E  F+C++CG  F+ KR L++H+ +LH  +             C  C   F  
Sbjct: 328 ----HSGENRFRCSECGKGFKCKRSLSTHL-KLHNGERSSKNGQDSKLFTCTQCGKSFNQ 382

Query: 409 KQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQY 468
              LN H+   H+G   K + C +C   F  + +L +HM++H + +     +C +CGK +
Sbjct: 383 SSNLNQHMRI-HTGE--KPFTCTQCGKSFSQSASLNQHMRIHTEEKPF---TCTQCGKSF 436

Query: 469 KWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVK 503
              S+L KH +I T     TC  CGK +S +  L  H++
Sbjct: 437 SQISYLAKHIRIHTGDKPFTCTQCGKSFSQLSSLNQHMR 475

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348522439|ref|XP_003448732.1| PREDICTED: zinc finger protein 250-like [Oreochromis niloticus]

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 160/323 (49%), Gaps = 19/323 (5%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  F C FC   F+Q+G  + H+  +H   K F C+VC  +F  Q +LK H   VH   
Sbjct: 260 GEKPFDCSFCGKRFKQQGVLKSHMR-IHTGEKPFACDVCGKRFIHQSNLKSHTR-VHTGE 317

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP  C +CGK F+   +LK H   H  Q  F C ICGK    K  F+ HM +H+G+  + 
Sbjct: 318 KPFSCNICGKHFTEQGSLKRHRGIHTGQKPFGCGICGKTFSRKTHFNIHMTVHTGEKPFD 377

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
           C +C K F  K   K H+ VH+ E    CS C + ++  Y  ++H R HS    F C IC
Sbjct: 378 CGFCGKKFSQKTHFKIHIRVHTGEKPFSCSACGKKFRLQYNLKRHMRVHSGEKPFGCDIC 437

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH--KLKLNC 399
            +  +    ++RH      S     E+PF C+DCG TF    HL  H+ R+H  +    C
Sbjct: 438 GERFTEQGSLKRH------SGVHTGEKPFCCDDCGKTFSRNTHLKRHM-RVHTGERPFGC 490

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C   FT +  L  H+   H+G   K + C+ C  RF     LKRHM VH   +     
Sbjct: 491 DVCGEKFTEQGVLKSHMRV-HTG--EKPFGCDVCGKRFRHQYTLKRHMGVHTGEKPF--- 544

Query: 460 SCNECGKQYKWESFLQKHKKICT 482
           SC  CG+++  +  L++H +I T
Sbjct: 545 SCGVCGERFTRQGNLKRHMRIHT 567

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326676493|ref|XP_689690.3| PREDICTED: zinc finger protein 845-like [Danio rerio]

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 174/348 (50%), Gaps = 23/348 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  + CQ C + F  +   ++H+  +H   K + C  C   F  +  LK HV  +H   
Sbjct: 201 GEKPYTCQDCGISFAVKQNLKRHMR-IHTGEKPYSCPECGRSFRVKQDLKSHVR-IHTGE 258

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP  C+ CGKSFS N TL+ H   H  +  F C  CGK+ R KQ    HM +H+GD  Y+
Sbjct: 259 KPFSCQQCGKSFSENKTLESHMRIHTGEKPFTCSQCGKNFRRKQNLKSHMRLHTGDKPYS 318

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
           C  C KS+  +KSL++H+  H+ E    C  C + +      R H + H+    + C+ C
Sbjct: 319 CPQCGKSYNEQKSLENHIRTHTGEKPFACDQCGKTFTQQSTLRGHIKIHTGEKPYTCQEC 378

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNC 399
            K  +  Q ++RHM  +H       E+PF C+ CG +FR+ + L  H+ R+H  +   +C
Sbjct: 379 GKSFTEKQNLKRHM-RIHTG-----EKPFTCSHCGKSFRVSKDLKIHV-RIHTGEKPFSC 431

Query: 400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
             C   F+  ++L  H+   H+G   K + C  C  RF   +NL+ H+++H   +     
Sbjct: 432 QQCGKSFSENKKLTSHMRI-HTGE--KPFVCSHCGKRFRGKQNLESHIRLHTGEKRY--- 485

Query: 460 SCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVK 503
           +C +CGK Y  +  L+ H +  T      C  CGK +    +L+ H++
Sbjct: 486 TCPQCGKSYNEQKSLENHIRSHTGEKPFACDQCGKSFRQQRILKGHIR 533

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260785163|ref|XP_002587632.1| hypothetical protein BRAFLDRAFT_267706 [Branchiostoma floridae] gi|229272782|gb|EEN43643.1| hypothetical protein BRAFLDRAFT_267706 [Branchiostoma floridae]

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 27/356 (7%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  ++C  C   F Q G  + H+   H   + ++CE C  +F+R  +LK H+   H   
Sbjct: 48  GEKSYQCDDCGKRFSQLGHLKGHMR-THTGERPYRCEECSKQFNRLGTLKIHMRN-HTGE 105

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP +CE C K FS   TLK+H  TH  +  ++C  CGK    +   +DHM  H+G+  Y 
Sbjct: 106 KPYRCEACSKQFSRFGTLKIHIRTHTGERPYQCDDCGKRFSQQSNLEDHMRTHTGERPYE 165

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
           C YC K F     LK H+  H+ +   +C  C + + +  +  KH R+H+    ++C  C
Sbjct: 166 CEYCNKCFSQSAHLKKHMRTHTGKTLYRCEACCKQFSTLGILNKHMRTHTGQKPYRCDAC 225

Query: 342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTF----RLKRHLNSHINRLHKLKL 397
            K  S++ G+++HM           E+P+ C +C   F    RLK H+ +H     +   
Sbjct: 226 SKQFSDLSGLKKHMWT------HTGEKPYSCEECSKQFSDPSRLKVHMRTHTG---ETPY 276

Query: 398 NCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNML 457
            C  C   FT    L  HI T H+G   K +KCE+C  +F+   +LK HM+ H       
Sbjct: 277 RCEQCSKQFTQFPNLKRHIRT-HTGE--KPYKCEECSKQFIQLSHLKSHMRTHT---GET 330

Query: 458 DSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKSCYGQQ 509
             SC  CGKQ+   S L+ H +  T      C  C K++S +  L+ H+++  G++
Sbjct: 331 PYSCGNCGKQFSMPSHLKIHMRTHTGEKPYRCDECSKQFSQLCSLKRHMRTHTGEK 386

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432912003|ref|XP_004078819.1| PREDICTED: zinc finger protein 726-like [Oryzias latipes]

 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 171/364 (46%), Gaps = 32/364 (8%)

Query: 151 KLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQV 210
           K HTR +      GE  F C+ C     +    + H+   H   + F CE+C   F +  
Sbjct: 223 KAHTRTHT-----GEKPFSCEICGKSLMKNSSLKDHMR-THTGERPFSCEICAKGFVKNS 276

Query: 211 SLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFD 270
           SL+ H+  +H   KP  C+ CGK+F+ NSTL+ H  TH  +  F C ICGK         
Sbjct: 277 SLRDHMR-IHTGEKPFSCKTCGKAFTQNSTLQHHMRTHTGEKPFSCKICGKAFFQPYILT 335

Query: 271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHER 330
           +HM  H+G+  ++C  C KSF+   SLK H+  H+ E    C  C + +   Y    H R
Sbjct: 336 NHMRKHTGERPFSCEICGKSFIRNSSLKDHMKSHTGERPFSCETCGKCFFQPYSLTNHMR 395

Query: 331 SHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFR----LKRH 384
            H+    F C IC K  +    ++ H++ +H +     +RPF C+ CG  F     L+ H
Sbjct: 396 IHTGERPFSCDICGKAFTQSGSLQHHVK-IHTA-----QRPFTCDTCGKAFTQNSTLQHH 449

Query: 385 LNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLK 444
           + +H     +   +C  C   F+    L  H+ T  S    + + CE+C  RF+ + +LK
Sbjct: 450 MRTHTG---ERPYSCTLCGKSFSRNDSLTSHVKTHTS---ERPFSCEQCGKRFIKSGSLK 503

Query: 445 RHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRN 500
            HMK H   R      C  CGK +   + L  H+K  T      CK+CGKR+ +   L  
Sbjct: 504 VHMKSHTDERPFF---CEICGKSFNRNASLNIHRKSHTGEKLYFCKTCGKRFFTSSSLTV 560

Query: 501 HVKS 504
           H+K+
Sbjct: 561 HMKT 564

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355710485|gb|EHH31949.1| hypothetical protein EGK_13120 [Macaca mulatta]

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 362 EKPFACMVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 419

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 420 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYEC 479

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H   H+ E   +C  C + Y   YL  +H ++H+    F C IC 
Sbjct: 480 KQCGKAFTGRSGLTKHTRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICMICG 539

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 540 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECR 592

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 593 VCGKAFTTSSHLVVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYV--- 646

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L+KH +I T      CK CGK YS  Y+L+ H+K+
Sbjct: 647 CNECGKAFRASSHLRKHGRIHTGQKPYKCKECGKAYSRFYLLKEHLKT 694

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355757048|gb|EHH60656.1| hypothetical protein EGM_12072 [Macaca fascicularis]

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 362 EKPFACMVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 419

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 420 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYEC 479

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H   H+ E   +C  C + Y   YL  +H ++H+    F C IC 
Sbjct: 480 KQCGKAFTGRSGLTKHTRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICMICG 539

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 540 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECR 592

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 593 VCGKAFTTSSHLVVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYV--- 646

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L+KH +I T      CK CGK YS  Y+L+ H+K+
Sbjct: 647 CNECGKAFRASSHLRKHGRIHTGQKPYKCKECGKAYSRFYLLKEHLKT 694

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|297284779|ref|XP_001117883.2| PREDICTED: zinc finger protein 778-like, partial [Macaca mulatta]

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 255 EKPFACMVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 312

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 313 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYEC 372

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H   H+ E   +C  C + Y   YL  +H ++H+    F C IC 
Sbjct: 373 KQCGKAFTGRSGLTKHTRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICMICG 432

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 433 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECR 485

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 486 VCGKAFTTSSHLVVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYV--- 539

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L+KH +I T      CK CGK YS  Y+L+ H+K+
Sbjct: 540 CNECGKAFRASSHLRKHGRIHTGQKPYKCKECGKAYSRFYLLKEHLKT 587

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|114664134|ref|XP_511167.2| PREDICTED: zinc finger protein 778 isoform 2 [Pan troglodytes]

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 166/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 362 EKPFACVVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 419

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 420 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHTRIHTGEKPYEC 479

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H+  H+ E   +C  C + Y   YL  +H ++H+    F C +C 
Sbjct: 480 KQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCR 539

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 540 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECK 592

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 593 VCGKAFTTSSHLIVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYI--- 646

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L+KH +I T      CK CGK Y+  Y+L+ H+K+
Sbjct: 647 CNECGKAFRASSHLRKHGRIHTGQKPYKCKECGKAYNRFYLLKEHLKT 694

Source: Pan troglodytes

Species: Pan troglodytes

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|153792259|ref|NP_872337.2| zinc finger protein 778 isoform 2 [Homo sapiens] gi|317373490|sp|Q96MU6.3|ZN778_HUMAN RecName: Full=Zinc finger protein 778

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 165/348 (47%), Gaps = 23/348 (6%)

Query: 165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
           E  F C  C  +F        HV  +H  IK + C  C   F  +  L +HV   H   K
Sbjct: 362 EKPFACVVCGKYFRNSSCLNNHVR-IHTGIKPYTCSYCGKAFTVRCGLTRHVR-THTGEK 419

Query: 225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           P  C+ CGK+F  +S L  H  TH  +  ++C  CGK      +  +H  +H+G+  Y C
Sbjct: 420 PYTCKDCGKAFCTSSGLTEHVRTHTGEKPYECKDCGKSFTVSSSLTEHARIHTGEKPYEC 479

Query: 285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRICD 342
             C K+F  +  L  H+  H+ E   +C  C + Y   YL  +H ++H+    F C +C 
Sbjct: 480 KQCGKAFTGRSGLTKHMRTHTGEKPYECKDCGKAYNRVYLLNEHVKTHTEEKPFICTVCR 539

Query: 343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLK--LNCV 400
           K   N   + +H++ +H   K     P++C DCG TF +   L  HI R H  +    C 
Sbjct: 540 KSFRNSSCLNKHIQ-IHTGIK-----PYECKDCGKTFTVSSSLTEHI-RTHTGEKPYECK 592

Query: 401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
            C   FT    L  HI T H+G   K + C++C   F ++ +L  H + H   +  +   
Sbjct: 593 VCGKAFTTSSHLIVHIRT-HTGE--KPYICKECGKAFASSSHLIEHRRTHTGEKPYI--- 646

Query: 461 CNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
           CNECGK ++  S L KH +I T      CK CGK Y+  Y+L+ H+K+
Sbjct: 647 CNECGKAFRASSHLHKHGRIHTGQKPYKCKECGKAYNRFYLLKEHLKT 694

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	514
ZFIN|ZDB-GENE-110913-125	616	si:dkeyp-53e4.2 "si:dkeyp-53e4	0.643	0.537	0.327	2.7e-52
ZFIN|ZDB-GENE-110913-92	548	si:ch211-271g18.3 "si:ch211-27	0.675	0.633	0.319	4.4e-52
ZFIN|ZDB-GENE-110914-41	573	si:dkey-233e3.3 "si:dkey-233e3	0.643	0.577	0.324	1.9e-51
UNIPROTKB|F1LUS6	762	LOC100362641 "Protein LOC10036	0.760	0.513	0.303	1.1e-50
RGD|2324317	765	Zfp945 "zinc finger protein 94	0.760	0.511	0.303	1.2e-50
ZFIN|ZDB-GENE-110913-151	410	si:ch211-152l15.3 "si:ch211-15	0.642	0.804	0.328	1.3e-50
UNIPROTKB|F1M073	773	LOC100362641 "Protein LOC10036	0.760	0.505	0.303	1.4e-50
ZFIN|ZDB-GENE-120214-30	454	si:ch1073-127d16.1 "si:ch1073-	0.677	0.766	0.319	3.6e-50
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.671	0.349	0.325	5.2e-50
ZFIN|ZDB-GENE-110913-143	984	si:ch211-209p16.3 "si:ch211-20	0.677	0.353	0.317	6.6e-50

ZFIN|ZDB-GENE-110913-125 si:dkeyp-53e4.2 "si:dkeyp-53e4.2" [Danio rerio (taxid:7955)]

 Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 116/354 (32%), Positives = 176/354 (49%)

Query:   164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
             GE  + CQ C   F   G    H   +H   +++ C+ C   F +  +L  H+  +H   
Sbjct:    53 GERPYTCQQCGKSFYHAGNFAAHQR-IHTGERKYTCQHCGKSFSKTGNLAVHMR-IHTGE 110

Query:   224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
             KP  C  CGKSF  N TLK+H  TH ++  F C  CGK I  K   D HM +H+G+  YT
Sbjct:   111 KPYSCSQCGKSFKQNVTLKIHMRTHNEERIFTCTQCGKSISQKHYLDIHMRIHTGENPYT 170

Query:   284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY--KSDYLRRKHERSHSSIFQCRIC 341
             CT C KSF YK SLKHH+  H+ E    C+ C + +  K+ ++      + + +F C  C
Sbjct:   171 CTECGKSFPYKGSLKHHMISHTEEKPFACAQCGKSFTTKASFMNHMDGHTGTIVFTCDQC 230

Query:   342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH-KLKL-NC 399
              K L+    +++HM+     D+      F+C++CG  F+ K  L  H+ R+H + KL  C
Sbjct:   231 GKSLTRKDSMKQHMKTHSGEDR------FRCSECGKGFKYKSKLKIHM-RVHNREKLFTC 283

Query:   400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
               C   F     LN H+   H+G   K + C +C   F  + NL +HM++H   +     
Sbjct:   284 TQCGKNFNQSSHLNQHMRI-HTGE--KPFTCTQCGKSFSYSANLNQHMRIHTGEKPF--- 337

Query:   460 SCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVKSCYGQQ 509
             +C +CGK +   + L +H +I T     TC  CGK +S    L  H++   G++
Sbjct:   338 TCTQCGKSFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNQHMRIHTGEK 391

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-92 si:ch211-271g18.3 "si:ch211-271g18.3" [Danio rerio (taxid:7955)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 119/373 (31%), Positives = 177/373 (47%)

Query:   146 KSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMK 205
             KSF +     K+  K   GE  F C  C   F Q      H+  +H   K F C  C   
Sbjct:   101 KSFNRSSSLNKHI-KIHTGEKPFTCTQCGKSFNQSSSLNNHIK-IHTGEKPFTCTQCGKS 158

Query:   206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH 265
             F++  SL  H++ +H   KP  C  CGKSF+ +S L +H   H  +  F C  CG+    
Sbjct:   159 FNQSSSLNNHMK-IHTGEKPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCTQCGRSFNR 217

Query:   266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYL 324
               + + HM +H+G+  +TCT C KSF     L +H+ +H+ E    C+ C + + +S YL
Sbjct:   218 SSSINKHMKIHTGEKPFTCTQCLKSFNRSSHLNNHMKIHTGEKPFTCTQCGKSFSQSTYL 277

Query:   325 RRKHERSHSSI--FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLK 382
               KH R H+    F C  C+K  +    + +HM+ +H  +K     PF C  CG +F   
Sbjct:   278 N-KHMRIHTGEKPFTCTQCEKSFNQSSSLNKHMK-IHTGEK-----PFTCTQCGRSFNQS 330

Query:   383 RHLNSHINRLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTN 440
              HLNSH+N +H  +    C  C   F     LN HI   H+G   K + C +C   F  +
Sbjct:   331 SHLNSHMN-IHTGEKPFTCTQCGKSFNQSSSLNKHIKI-HTGE--KPFTCTQCGKSFNQS 386

Query:   441 KNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIY 496
              +L  HMK+H   +     +C +CGK +   S+L  H +I T     TC  CG+ ++   
Sbjct:   387 SSLNNHMKIHTGEKPF---TCTQCGKSFNQSSYLNLHMRIHTGEKPFTCTQCGRSFNRSS 443

Query:   497 VLRNHVKSCYGQQ 509
              L  H+K   G++
Sbjct:   444 SLNKHMKIHTGEK 456

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110914-41 si:dkey-233e3.3 "si:dkey-233e3.3" [Danio rerio (taxid:7955)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 115/354 (32%), Positives = 171/354 (48%)

Query:   164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
             GE  + CQ C   F   G    H   +H   +++ C+ C   F +  +L  H+  +H   
Sbjct:    95 GERPYTCQQCGKSFYHAGNFAAHQR-IHTGQRKYTCQHCGKSFSKTGNLAVHMR-IHTGE 152

Query:   224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
             KP  C  CGKSF  N TLK+H  TH ++  F C  C K I  K   D HM +H+G+  YT
Sbjct:   153 KPYSCSQCGKSFKQNVTLKIHMRTHNEERIFTCTQCWKSISQKHYLDIHMRIHTGEKPYT 212

Query:   284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS--IFQCRIC 341
             CT C KSF YK SLKHH+  HS E    C+ C + + +      H   H+   +F C  C
Sbjct:   213 CTECGKSFPYKGSLKHHMISHSGEKPFACAQCGKSFTTKASLMNHMDGHTGTIVFTCDRC 272

Query:   342 DKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH-KLKL-NC 399
              K  +    +++HM+     D+       +C++CG  F+ +  L  H+ R+H + KL  C
Sbjct:   273 GKTFTRKDSMKQHMKTHSGEDR------LRCSECGKGFKYRSKLKIHM-RIHNREKLFTC 325

Query:   400 VHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS 459
               C   F     LN H+   H+G   K + C +C   F  + NL +HM++H   +     
Sbjct:   326 TQCGKNFDQSSNLNQHMRI-HTGE--KPFTCTQCGKSFSNSANLNQHMRIHTGEKPF--- 379

Query:   460 SCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVKSCYGQQ 509
             +C +CGK +   S+L  H +I T     TC  CGK +S    L  H++   G++
Sbjct:   380 TCTQCGKSFSQSSYLNIHMRIHTGEKPFTCPQCGKSFSQSPYLNQHMRIHTGEK 433

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1LUS6 LOC100362641 "Protein LOC100362641" [Rattus norvegicus (taxid:10116)]

 Score = 528 (190.9 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 129/425 (30%), Positives = 206/425 (48%)

Query:   101 FDCQDSEWRDVLKKKQ------GVLHLKANGSRIHYPSEKTDVKQLRLDKM-KSFTKKLH 153
             F C++  +RD +++K       G     ++G +IH+    T  K  +  +  KSFT+K +
Sbjct:   295 FSCREYHYRDGIREKCFRCKECGKTLSTSSGLKIHHRIH-TGEKPYKCTECDKSFTQKSN 353

Query:   154 TRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLK 213
              R +  K   GEN FKC  C   F Q+   R H    H   K +KC  C   F     L+
Sbjct:   354 LRMHQ-KIHTGENTFKCSDCNKCFTQKCLLRIHQR-THSGEKPYKCNECDKAFAGSSYLR 411

Query:   214 KHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM 273
              H + +H   KP KC  C KSF+    L++H   H  +  +KC  C K    K +   H 
Sbjct:   412 SH-QRIHSGKKPYKCSECDKSFNRKDHLRIHQRVHTGEKPYKCSECDKCFTQKGSVRIHQ 470

Query:   274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYLRRKHERSH 332
              +H+G+  Y C+ C+KSF  K  L  H  +H+ E   KCS CD+ + + D+LR  H+R H
Sbjct:   471 RIHTGEKPYKCSKCDKSFTKKDGLVIHQIIHTGEEPYKCSECDKSFNRKDHLRT-HQRFH 529

Query:   333 SS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHIN 390
             +   I++C  CD+  +    +R H + +H  DK      ++C+ CG +F  + HL +H  
Sbjct:   530 TGERIYKCSECDEYFTQKSSLRIH-QKIHTGDKT-----YKCSVCGKSFNRRNHLRTH-E 582

Query:   391 RLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMK 448
             R+H  +   +C   +  FT+   L  H    HS    K +KC +CD  F ++  ++ H +
Sbjct:   583 RIHAGEKPYDCTEFENSFTHNGSLRIHHRL-HS--RKKVYKCSECDKSFTSSSYVRIHQR 639

Query:   449 VHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
             +H   +      C+EC K +   S+L+ H++I T      C  C K ++    LR H +S
Sbjct:   640 IHSGEKPY---KCSECNKCFTSGSYLRMHQRIHTGDKPYKCGECDKCFTQKCSLRIHQRS 696

Query:   505 CYGQQ 509
               G++
Sbjct:   697 HTGEK 701

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|2324317 Zfp945 "zinc finger protein 945" [Rattus norvegicus (taxid:10116)]

 Score = 528 (190.9 bits), Expect = 1.2e-50, P = 1.2e-50
 Identities = 129/425 (30%), Positives = 206/425 (48%)

Query:   101 FDCQDSEWRDVLKKKQ------GVLHLKANGSRIHYPSEKTDVKQLRLDKM-KSFTKKLH 153
             F C++  +RD +++K       G     ++G +IH+    T  K  +  +  KSFT+K +
Sbjct:   298 FSCREYHYRDGIREKCFRCKECGKTLSTSSGLKIHHRIH-TGEKPYKCTECDKSFTQKSN 356

Query:   154 TRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLK 213
              R +  K   GEN FKC  C   F Q+   R H    H   K +KC  C   F     L+
Sbjct:   357 LRMHQ-KIHTGENTFKCSDCNKCFTQKCLLRIHQR-THSGEKPYKCNECDKAFAGSSYLR 414

Query:   214 KHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM 273
              H + +H   KP KC  C KSF+    L++H   H  +  +KC  C K    K +   H 
Sbjct:   415 SH-QRIHSGKKPYKCSECDKSFNRKDHLRIHQRVHTGEKPYKCSECDKCFTQKGSVRIHQ 473

Query:   274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYLRRKHERSH 332
              +H+G+  Y C+ C+KSF  K  L  H  +H+ E   KCS CD+ + + D+LR  H+R H
Sbjct:   474 RIHTGEKPYKCSKCDKSFTKKDGLVIHQIIHTGEEPYKCSECDKSFNRKDHLRT-HQRFH 532

Query:   333 SS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHIN 390
             +   I++C  CD+  +    +R H + +H  DK      ++C+ CG +F  + HL +H  
Sbjct:   533 TGERIYKCSECDEYFTQKSSLRIH-QKIHTGDKT-----YKCSVCGKSFNRRNHLRTH-E 585

Query:   391 RLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMK 448
             R+H  +   +C   +  FT+   L  H    HS    K +KC +CD  F ++  ++ H +
Sbjct:   586 RIHAGEKPYDCTEFENSFTHNGSLRIHHRL-HS--RKKVYKCSECDKSFTSSSYVRIHQR 642

Query:   449 VHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
             +H   +      C+EC K +   S+L+ H++I T      C  C K ++    LR H +S
Sbjct:   643 IHSGEKPY---KCSECNKCFTSGSYLRMHQRIHTGDKPYKCGECDKCFTQKCSLRIHQRS 699

Query:   505 CYGQQ 509
               G++
Sbjct:   700 HTGEK 704

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-110913-151 si:ch211-152l15.3 "si:ch211-152l15.3" [Danio rerio (taxid:7955)]

 Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
 Identities = 116/353 (32%), Positives = 166/353 (47%)

Query:   165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK 224
             +N+F C  C   F ++G  + H+  +H   K F C  C   F +  SL  H+  +H   K
Sbjct:    63 KNRFTCTQCGRNFGRKGDLKIHMR-IHTGEKPFTCTQCGKSFSQSSSLNYHM-MIHAGEK 120

Query:   225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
             P  C  C KSFS +S L  H+  H  +  F C  CGK  RH      HM +H+G+  +TC
Sbjct:   121 PFTCSQCVKSFSCSSHLNKHTMIHTGEKPFSCTQCGKSFRHSLFLKQHMMIHTGEKPFTC 180

Query:   285 TYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSI--FQCRICD 342
             T C KSF    SL HH+ +H+ E    C+ C + +        H R H+    F C  C 
Sbjct:   181 TQCGKSFSQSSSLNHHMMIHTGEKPFTCTQCGKSFSQSSSLNHHMRIHTGEKPFTCTQCG 240

Query:   343 KILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH--KLKLNCV 400
             K  S    +  HM  +H  +K     PF C  CG +F     LN H+ R+H  +    C 
Sbjct:   241 KSFSQSSSLNHHMR-IHTGEK-----PFTCTQCGKSFIQSSQLNRHM-RIHTGEKPFTCT 293

Query:   401 HCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSS 460
             HC   F+    LN H +T HSG   K + C +C   F  + +L  HM++H   +     S
Sbjct:   294 HCGKSFSKSSSLNEH-MTIHSGE--KPFTCTQCRKSFSCSSHLNHHMRIHTGEKLF---S 347

Query:   461 CNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYVLRNHVKSCYGQQ 509
             C +CGK ++  S L++H +I T     TC  CG R+S    L  H+    G++
Sbjct:   348 CTQCGKSFRRSSSLKEHMRIHTGEKPFTCIQCGNRFSRSSTLNQHMMIHTGEK 400

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1M073 LOC100362641 "Protein LOC100362641" [Rattus norvegicus (taxid:10116)]

 Score = 528 (190.9 bits), Expect = 1.4e-50, P = 1.4e-50
 Identities = 129/425 (30%), Positives = 206/425 (48%)

Query:   101 FDCQDSEWRDVLKKKQ------GVLHLKANGSRIHYPSEKTDVKQLRLDKM-KSFTKKLH 153
             F C++  +RD +++K       G     ++G +IH+    T  K  +  +  KSFT+K +
Sbjct:   306 FSCREYHYRDGIREKCFRCKECGKTLSTSSGLKIHHRIH-TGEKPYKCTECDKSFTQKSN 364

Query:   154 TRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLK 213
              R +  K   GEN FKC  C   F Q+   R H    H   K +KC  C   F     L+
Sbjct:   365 LRMHQ-KIHTGENTFKCSDCNKCFTQKCLLRIHQR-THSGEKPYKCNECDKAFAGSSYLR 422

Query:   214 KHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM 273
              H + +H   KP KC  C KSF+    L++H   H  +  +KC  C K    K +   H 
Sbjct:   423 SH-QRIHSGKKPYKCSECDKSFNRKDHLRIHQRVHTGEKPYKCSECDKCFTQKGSVRIHQ 481

Query:   274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYLRRKHERSH 332
              +H+G+  Y C+ C+KSF  K  L  H  +H+ E   KCS CD+ + + D+LR  H+R H
Sbjct:   482 RIHTGEKPYKCSKCDKSFTKKDGLVIHQIIHTGEEPYKCSECDKSFNRKDHLRT-HQRFH 540

Query:   333 SS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHIN 390
             +   I++C  CD+  +    +R H + +H  DK      ++C+ CG +F  + HL +H  
Sbjct:   541 TGERIYKCSECDEYFTQKSSLRIH-QKIHTGDKT-----YKCSVCGKSFNRRNHLRTH-E 593

Query:   391 RLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMK 448
             R+H  +   +C   +  FT+   L  H    HS    K +KC +CD  F ++  ++ H +
Sbjct:   594 RIHAGEKPYDCTEFENSFTHNGSLRIHHRL-HS--RKKVYKCSECDKSFTSSSYVRIHQR 650

Query:   449 VHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKS 504
             +H   +      C+EC K +   S+L+ H++I T      C  C K ++    LR H +S
Sbjct:   651 IHSGEKPY---KCSECNKCFTSGSYLRMHQRIHTGDKPYKCGECDKCFTQKCSLRIHQRS 707

Query:   505 CYGQQ 509
               G++
Sbjct:   708 HTGEK 712

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-120214-30 si:ch1073-127d16.1 "si:ch1073-127d16.1" [Danio rerio (taxid:7955)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 119/372 (31%), Positives = 183/372 (49%)

Query:   146 KSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMK 205
             KSFT K + + +  K   G + F C  C   F  +     H+  +H   K F C  C  K
Sbjct:    61 KSFTLKRYLKNHM-KIHTGAHPFTCPECDKCFTMKHSLETHLK-IHTGEKPFTCPDCGKK 118

Query:   206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH 265
             F  + SL  H+  +H   KP  C+VCG+SF     L  H T H  +  + CP CGK  R 
Sbjct:   119 FRLKQSLDGHLR-IHTGEKPYTCQVCGRSFREKQILDKHLTIHTGEKPYSCPECGKSFRV 177

Query:   266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLR 325
             K   ++H+ +H+G+  YTC  C KSF  K++L+ H+ +H+ E    C  C R ++     
Sbjct:   178 KNCLENHIKIHTGEKPYTCQECGKSFTEKQNLERHIRIHTGEKPFACPECGRSFRVKQDL 237

Query:   326 RKHERSHSSI--FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
             + H R H+    F C+ C K  S  + +  HM  +H  +K     PF C+ CG  FR K+
Sbjct:   238 KIHLRIHTGEKPFSCQQCGKSFSENKKLENHMR-IHTGEK-----PFVCSHCGKNFRGKQ 291

Query:   384 HLNSHINRLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNK 441
             +L SH+ RLH       C  C   +  ++ L  HI T H+G   K + C++C   F    
Sbjct:   292 NLESHM-RLHTGNQPYTCPQCGKSYNQQKSLQIHIRT-HTGE--KPFACDQCGKSFTQQS 347

Query:   442 NLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYV 497
              LK H+K+H   +     +C +CGK +  ++ L++HKKI +     TC+ C K ++    
Sbjct:   348 TLKGHIKIHTGEKPF---TCPQCGKSFIEKTKLERHKKIHSGEKAYTCQHCKKSFTLKQS 404

Query:   498 LRNHVKSCYGQQ 509
             L  H++   G++
Sbjct:   405 LDIHMRIHTGEK 416

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 529 (191.3 bits), Expect = 5.2e-50, P = 5.2e-50
 Identities = 122/375 (32%), Positives = 185/375 (49%)

Query:   146 KSFTKKLHTRKYNDKFSF--GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCP 203
             KSF+   H+   N       GE  F C  C   F Q     +H+  +H   K F C  C 
Sbjct:   380 KSFS---HSANLNQHMIIHTGERPFMCTPCGKSFSQLSSFNQHMR-IHTGEKLFSCTQCG 435

Query:   204 MKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHI 263
               F +  +L  H+  +H   KP  C  CGKSFS +S L +H+  H  +  F C  CGK  
Sbjct:   436 KSFSQSSNLILHMR-IHTGEKPFTCTQCGKSFSQSSNLILHTRIHTGEKPFTCTQCGKSF 494

Query:   264 RHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSD 322
              H  + + HM +H+G+  +TCT C KSF    SL  H+ +H+ E    C+ C + + +S 
Sbjct:   495 SHSSSLNQHMMIHTGEKPFTCTQCGKSFSQSLSLNQHMKIHTGEKPFTCTKCGKSFNQSS 554

Query:   323 YLRRKHERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFR 380
             YL  KH R H+    F C  C K  ++   +++HM+N H +     E  +QC++CG +  
Sbjct:   555 YLN-KHMRIHTGKRSFTCTRCGKSFTHSSHLKKHMKN-HTA-----ETLYQCSECGKSLA 607

Query:   381 LKRHLNSHINRLH-KLKL-NCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFV 438
              K  L  H+ R+H ++KL  C  C   F+N   LN H+   H+G   K + C +C   F 
Sbjct:   608 NKSKLKIHM-RIHNRVKLFTCTQCGKSFSNSANLNQHMRI-HTGE--KPFTCTQCGKSFS 663

Query:   439 TNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSS 494
              + NL  HM++H   +     +C++CGK +   S L  H +I T     TC  CGK +S 
Sbjct:   664 QSSNLNLHMRIHTGEKPF---TCSQCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGKSFSQ 720

Query:   495 IYVLRNHVKSCYGQQ 509
               +L  H+++  G++
Sbjct:   721 SSILNIHMRNHTGEK 735

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-143 si:ch211-209p16.3 "si:ch211-209p16.3" [Danio rerio (taxid:7955)]

 Score = 528 (190.9 bits), Expect = 6.6e-50, P = 6.6e-50
 Identities = 118/372 (31%), Positives = 170/372 (45%)

Query:   146 KSFTKKLHTRKYNDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMK 205
             KSF+   H  K+    + GE  F C  C   F       KH+  +H   K F C  C   
Sbjct:    42 KSFSCSSHLNKHMRNHT-GEKPFSCTQCGKSFSYPSALNKHMR-IHTGEKPFSCTQCGKS 99

Query:   206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH 265
             F    SL  H+  +H   KP  C  CGKSFS +S L  H   H  +  F C  CGK  R+
Sbjct:   100 FSYSSSLNYHM-MIHAGEKPSACSQCGKSFSCSSHLNKHMMIHTGKKPFTCTQCGKSFRN 158

Query:   266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLR 325
                   HM +H+G+  +TCT C KSF    SL HH+ +H+ E    C+ C + +      
Sbjct:   159 SLFLKQHMMIHTGEKPFTCTQCGKSFSRSSSLNHHIMIHTGEKPFTCTQCGKSFIQSSQL 218

Query:   326 RKHERSHSSI--FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
               H R H+    F C  C K       +++HM   H  +K     PF C  CG +FR   
Sbjct:   219 NLHMRIHTGEKPFSCTQCGKSFRRSSSLKQHMRT-HTGEK-----PFTCTQCGKSFRRSS 272

Query:   384 HLNSHINRLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNK 441
             HLN H+ R+H  +    C  C   F     LN+H+   H+G   K + C +C   F  + 
Sbjct:   273 HLNHHM-RIHTGEKPFTCTQCGKSFRRSSHLNHHMRI-HTGE--KPFSCTQCGKSFSKSS 328

Query:   442 NLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSIYV 497
             +L  HM+ H   +     +C +CGK ++   FL++H  I T     +C  CGK +S    
Sbjct:   329 SLNHHMRTHTGEKPF---TCTQCGKSFRNSLFLKQHMMIHTGEKPFSCTQCGKNFSKSSS 385

Query:   498 LRNHVKSCYGQQ 509
             L +H+++  G++
Sbjct:   386 LNHHMRTHTGEK 397

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	514
KOG3608|consensus	467		99.94
KOG1074|consensus	958		99.94
KOG1074|consensus	958		99.94
KOG3608|consensus	467		99.93
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.91
KOG3623|consensus	1007		99.84
KOG3623|consensus	1007		99.8
KOG3576|consensus	267		99.57
KOG3576|consensus	267		99.57
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
PLN03086	567	PRLI-interacting factor K; Provisional	99.07
PHA00733	128	hypothetical protein	98.93
PHA00733	128	hypothetical protein	98.85
PHA02768	55	hypothetical protein; Provisional	98.67
KOG3993|consensus	500		98.61
KOG3993|consensus	500		98.61
PHA02768	55	hypothetical protein; Provisional	98.54
PHA00616	44	hypothetical protein	98.29
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.24
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.2
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.13
PHA00732	79	hypothetical protein	98.0
PHA00616	44	hypothetical protein	97.99
PHA00732	79	hypothetical protein	97.94
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.62
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.59
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.46
KOG1146|consensus	1406		97.34
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.31
KOG2231|consensus	669		97.3
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.3
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.28
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.27
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.45
KOG2231|consensus	669		96.43
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.4
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.35
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.31
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.29
smart00355	26	ZnF_C2H2 zinc finger.	96.25
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.16
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.04
smart00355	26	ZnF_C2H2 zinc finger.	96.03
KOG2482|consensus	423		95.98
KOG2482|consensus	423		95.7
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.68
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.6
KOG2785|consensus	390		95.5
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.4
KOG1146|consensus	1406		95.29
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.86
PRK04860	160	hypothetical protein; Provisional	94.54
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.43
KOG2785|consensus	390		94.37
PRK04860	160	hypothetical protein; Provisional	94.3
COG5048	467	FOG: Zn-finger [General function prediction only]	93.54
COG5048	467	FOG: Zn-finger [General function prediction only]	91.85
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.7
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.92
PF01352	41	KRAB: KRAB box; InterPro: IPR001909 The Krueppel-a	90.62
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.15
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.45
KOG4173|consensus	253		88.38
KOG2893|consensus	341		88.1
COG4049	65	Uncharacterized protein containing archaeal-type C	87.57
KOG4173|consensus	253		87.11
COG4049	65	Uncharacterized protein containing archaeal-type C	86.76
KOG2893|consensus	341		86.72
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	86.53
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	86.14
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	85.93
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.23
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	83.11

>KOG3608|consensus

Probab=99.94  E-value=8e-27  Score=215.74  Aligned_cols=219  Identities=25%  Similarity=0.520  Sum_probs=154.3

Q ss_pred             ccccccccChhhhhhhhhhccC------------C-cccccCC--CcccccccccHHHHHHHhcCCCcccccccccccCC
Q psy2973         229 EVCGKSFSNNSTLKVHSTTHAD------------Q-GRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLY  293 (514)
Q Consensus       229 ~~C~~~f~~~~~L~~H~~~h~~------------~-~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  293 (514)
                      ..|+..|.+...|.+|...|..            + ..+.|..  |-+.|.+++.|+.|.+.|++++...|+.||..|.+
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~  219 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRT  219 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhcc
Confidence            4566666666666666655521            1 1245543  77777777777777777777777777777777777


Q ss_pred             hHHHHHhhhhcc--cCCcccCCcCCCcCCCHHHHHHHHHhcCCccccCccccccCCHHHHHHHHHHhcCCCCCCCCCCcc
Q psy2973         294 KKSLKHHLFVHS--SEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQ  371 (514)
Q Consensus       294 ~~~L~~H~~~H~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~  371 (514)
                      +..|..|++.-+  ...+|.|..|.+.|.+...|..|+..|-.-|+|+.|+...+..++|.+|++..|..     .+||+
T Consensus       220 ~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~-----dkpfK  294 (467)
T KOG3608|consen  220 KTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSK-----DKPFK  294 (467)
T ss_pred             ccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhcc-----CCCcc
Confidence            777777776543  34567777777777777777777777777777777777777777777777777764     66777


Q ss_pred             cCcCCcccCChHHHHHHHHhhcCCCccccc--cccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHh
Q psy2973         372 CNDCGSTFRLKRHLNSHINRLHKLKLNCVH--CQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKV  449 (514)
Q Consensus       372 C~~C~~~f~~~~~L~~H~~~~h~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~  449 (514)
                      |..|+..|.+.+.|.+|+..+....|+|..  |..+|.+...|..|++.+|.|.+..+|.|..|++.|++..+|..|++.
T Consensus       295 Cd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  295 CDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             ccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHH
Confidence            777777777777777777633334677766  777777777777777777766666677777777777777777777765


Q ss_pred             hcC
Q psy2973         450 HEK  452 (514)
Q Consensus       450 H~~  452 (514)
                      .++
T Consensus       375 kH~  377 (467)
T KOG3608|consen  375 KHG  377 (467)
T ss_pred             hhc
Confidence            554

>KOG1074|consensus

Probab=99.94  E-value=5.8e-28  Score=246.01  Aligned_cols=226  Identities=20%  Similarity=0.403  Sum_probs=168.1

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccC----CcccCC---cCCCcCCCHHHH
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE----FTSKCS---VCDRLYKSDYLR  325 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~----~~~~C~---~C~~~f~~~~~l  325 (514)
                      |-+|-+|.++..-++.|+.|.++|+|++||+|.+||+.|.++.+|+.||-.|...    .++.|+   +|-+.|...-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            3689999999999999999999999999999999999999999999999998654    468899   999999999999


Q ss_pred             HHHHHhcCC---------------ccccCccccccCCHHHHHHHHHHhcCCCC-----------CCC----CCCcccCcC
Q psy2973         326 RKHERSHSS---------------IFQCRICDKILSNIQGIRRHMENMHNSDK-----------DNT----ERPFQCNDC  375 (514)
Q Consensus       326 ~~H~~~h~~---------------~~~C~~C~~~f~~~~~l~~H~~~~H~~~~-----------~~~----~~~~~C~~C  375 (514)
                      ..|+++|..               .-+|..|.+.|.....+..++ ..|.+..           ...    ..+..+..|
T Consensus       685 pQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~-se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~  763 (958)
T KOG1074|consen  685 PQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQI-SEQPSPESEPDEQMDERTETEELDVTPPPPENSC  763 (958)
T ss_pred             cceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhh-hccCCcccCCcccccccccccccccCCCcccccc
Confidence            999999872               147999999999999999888 4442110           111    226788889


Q ss_pred             CcccCChHHHHHHHHhh----------------------cC--CCc-cccccccccCChHHHHHHHH-------------
Q psy2973         376 GSTFRLKRHLNSHINRL----------------------HK--LKL-NCVHCQAIFTNKQRLNYHIL-------------  417 (514)
Q Consensus       376 ~~~f~~~~~L~~H~~~~----------------------h~--~~~-~C~~C~~~f~~~~~L~~H~~-------------  417 (514)
                      +..+.....+..+-...                      +.  .+. .+.+++-.-...-.+.--..             
T Consensus       764 ~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t  843 (958)
T KOG1074|consen  764 GRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLAT  843 (958)
T ss_pred             ccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhccccccccccccc
Confidence            98886544433321100                      00  123 56666544332211110000             


Q ss_pred             ----hhcC----------------------CCCCCcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCCh
Q psy2973         418 ----TKHS----------------------GPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWE  471 (514)
Q Consensus       418 ----~~H~----------------------~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~  471 (514)
                          ..+.                      .+......|.+|++.|.+.++|..|+|+|++++|   |.|.+|++.|..+
T Consensus       844 ~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KP---F~C~fC~~aFttr  920 (958)
T KOG1074|consen  844 KTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKP---FFCHFCEEAFTTR  920 (958)
T ss_pred             ccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCC---ccchhhhhhhhhh
Confidence                0000                      0001226799999999999999999999999999   8999999999999


Q ss_pred             hhHHHHhcccc
Q psy2973         472 SFLQKHKKICT  482 (514)
Q Consensus       472 ~~L~~H~~~h~  482 (514)
                      ..|+.||.+|.
T Consensus       921 gnLKvHMgtH~  931 (958)
T KOG1074|consen  921 GNLKVHMGTHM  931 (958)
T ss_pred             hhhhhhhcccc
Confidence            99999999987

>KOG1074|consensus

Probab=99.94  E-value=2.1e-28  Score=249.15  Aligned_cols=229  Identities=21%  Similarity=0.346  Sum_probs=164.9

Q ss_pred             ccccccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHHHhcC------CccccC---ccccccCCHHHHH
Q psy2973         282 YTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS------SIFQCR---ICDKILSNIQGIR  352 (514)
Q Consensus       282 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~------~~~~C~---~C~~~f~~~~~l~  352 (514)
                      -+|-+|.+....++.|+.|.++|+|++||+|.+||++|.++.+|+.|+-+|.      ..+.|+   +|-+.|.+.-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            5799999999999999999999999999999999999999999999999886      258899   9999999999999


Q ss_pred             HHHHHhcC-CCCCCC----C---CCcccCcCCcccCChHHHHHHHHhh-------c--------C--C----Cccccccc
Q psy2973         353 RHMENMHN-SDKDNT----E---RPFQCNDCGSTFRLKRHLNSHINRL-------H--------K--L----KLNCVHCQ  403 (514)
Q Consensus       353 ~H~~~~H~-~~~~~~----~---~~~~C~~C~~~f~~~~~L~~H~~~~-------h--------~--~----~~~C~~C~  403 (514)
                      .|+ .+|. +....+    +   ..-+|..|.+.|.....+..++..+       +        .  .    +..+..|+
T Consensus       686 QhI-riH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~  764 (958)
T KOG1074|consen  686 QHI-RIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCG  764 (958)
T ss_pred             ceE-EeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccc
Confidence            999 5565 333322    2   2357888999998777777776533       1        0  0    34678888


Q ss_pred             cccCChHHHHHHHHhh--cC------------------CCCCCcc-cccccccccCChHHHHHHHH--------------
Q psy2973         404 AIFTNKQRLNYHILTK--HS------------------GPNYKAW-KCEKCDMRFVTNKNLKRHMK--------------  448 (514)
Q Consensus       404 ~~f~~~~~L~~H~~~~--H~------------------~~~~k~~-~C~~C~~~F~~~~~L~~H~~--------------  448 (514)
                      ..+.....+..+-.+.  +.                  ..+.++. .+..++..-...-.+.-=+.              
T Consensus       765 ~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~  844 (958)
T KOG1074|consen  765 RELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATK  844 (958)
T ss_pred             cccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccc
Confidence            8877666655543211  00                  0112445 56665543332221110000              


Q ss_pred             ----hhcCCC-------------------Cc--ccccccccccccCChhhHHHHhcccc----cccccccccccCHHHHH
Q psy2973         449 ----VHEKNR-------------------NM--LDSSCNECGKQYKWESFLQKHKKICT----TTCKSCGKRYSSIYVLR  499 (514)
Q Consensus       449 ----~H~~~~-------------------~~--~~~~C~~C~~~f~~~~~L~~H~~~h~----~~C~~C~~~f~~~~~l~  499 (514)
                          ++.+..                   ..  ....|..||+.|.+.++|..|+|+|+    |.|.+|++.|..+..|+
T Consensus       845 ~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLK  924 (958)
T KOG1074|consen  845 TNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLK  924 (958)
T ss_pred             cccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhh
Confidence                000000                   00  13579999999999999999999998    89999999999999999


Q ss_pred             HhhhhhhCCCCC
Q psy2973         500 NHVKSCYGQQKN  511 (514)
Q Consensus       500 ~H~~~h~ge~~~  511 (514)
                      .||.+|++..|+
T Consensus       925 vHMgtH~w~q~~  936 (958)
T KOG1074|consen  925 VHMGTHMWVQPP  936 (958)
T ss_pred             hhhccccccCCC
Confidence            999999998875

>KOG3608|consensus

Probab=99.93  E-value=7.8e-26  Score=209.24  Aligned_cols=216  Identities=24%  Similarity=0.459  Sum_probs=188.8

Q ss_pred             ccccC--CCcccccccccHHHHHHHhcC------------C-Ccccccc--cccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         253 RFKCP--ICGKHIRHKQTFDDHMNMHSG------------D-VKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       253 ~~~C~--~C~~~f~~~~~L~~H~~~h~~------------~-~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|.|.  .|+..|.+...|..|+-.|.-            + ..+.|..  |.+.|.++..|+.|++.|++++...|+.|
T Consensus       134 ~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~C  213 (467)
T KOG3608|consen  134 NFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHC  213 (467)
T ss_pred             hhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchH
Confidence            36774  599999999999999987742            2 2356765  99999999999999999999999999999


Q ss_pred             CCcCCCHHHHHHHHHhcC----CccccCccccccCCHHHHHHHHHHhcCCCCCCCCCCcccCcCCcccCChHHHHHHHHh
Q psy2973         316 DRLYKSDYLRRKHERSHS----SIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINR  391 (514)
Q Consensus       316 ~~~f~~~~~l~~H~~~h~----~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  391 (514)
                      |.-|.++..|-.|.+..+    .+|+|..|.+.|.+...|..|+.++-        .-|+|+.|+.+....+.|..|++.
T Consensus       214 g~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--------n~ykCplCdmtc~~~ssL~~H~r~  285 (467)
T KOG3608|consen  214 GELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHV--------NCYKCPLCDMTCSSASSLTTHIRY  285 (467)
T ss_pred             HHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--------hcccccccccCCCChHHHHHHHHh
Confidence            999999999999988765    58999999999999999999995543        359999999999999999999998


Q ss_pred             hcC--CCccccccccccCChHHHHHHHHhhcCCCCCCcccccc--cccccCChHHHHHHHHhhc-CCCCccccccccccc
Q psy2973         392 LHK--LKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEK--CDMRFVTNKNLKRHMKVHE-KNRNMLDSSCNECGK  466 (514)
Q Consensus       392 ~h~--~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~-~~~~~~~~~C~~C~~  466 (514)
                      .|.  .||+|+.|++.|.+.+.|..|+. .|+.   ..|.|..  |..+|.+..+|++|++.++ |+.| +.|.|-.|.+
T Consensus       286 rHs~dkpfKCd~Cd~~c~~esdL~kH~~-~HS~---~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np-~~Y~CH~Cdr  360 (467)
T KOG3608|consen  286 RHSKDKPFKCDECDTRCVRESDLAKHVQ-VHSK---TVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP-ILYACHCCDR  360 (467)
T ss_pred             hhccCCCccccchhhhhccHHHHHHHHH-hccc---cceecCCCCCcHHHHHHHHHHHHHHHhccCCCC-Cceeeecchh
Confidence            887  59999999999999999999998 6773   5699988  9999999999999999766 5555 5699999999


Q ss_pred             ccCChhhHHHHhccc
Q psy2973         467 QYKWESFLQKHKKIC  481 (514)
Q Consensus       467 ~f~~~~~L~~H~~~h  481 (514)
                      .|++..+|..|++..
T Consensus       361 ~ft~G~~L~~HL~kk  375 (467)
T KOG3608|consen  361 FFTSGKSLSAHLMKK  375 (467)
T ss_pred             hhccchhHHHHHHHh
Confidence            999999999996543

>KOG2462|consensus

Probab=99.92  E-value=1.5e-25  Score=203.14  Aligned_cols=107  Identities=32%  Similarity=0.695  Sum_probs=100.0

Q ss_pred             CCCcccCcCCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHH
Q psy2973         367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRH  446 (514)
Q Consensus       367 ~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H  446 (514)
                      .+.+.|++||+.|.+...|..|++ .|+.+..|.+||+.|...-.|+-|++ .|+|+  |||.|+.|+++|.++++|+.|
T Consensus       159 ~ka~~C~~C~K~YvSmpALkMHir-TH~l~c~C~iCGKaFSRPWLLQGHiR-THTGE--KPF~C~hC~kAFADRSNLRAH  234 (279)
T KOG2462|consen  159 KKAFSCKYCGKVYVSMPALKMHIR-THTLPCECGICGKAFSRPWLLQGHIR-THTGE--KPFSCPHCGKAFADRSNLRAH  234 (279)
T ss_pred             cccccCCCCCceeeehHHHhhHhh-ccCCCcccccccccccchHHhhcccc-cccCC--CCccCCcccchhcchHHHHHH
Confidence            677999999999999999999998 88899999999999999999999998 79998  999999999999999999999


Q ss_pred             HHhhcCCCCcccccccccccccCChhhHHHHhcc
Q psy2973         447 MKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKI  480 (514)
Q Consensus       447 ~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  480 (514)
                      |+||.+.++   |+|..|+|+|...+.|.+|...
T Consensus       235 mQTHS~~K~---~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  235 MQTHSDVKK---HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHhhcCCcc---ccCcchhhHHHHHHHHHHhhhh
Confidence            999999997   9999999999999999999765

>KOG2462|consensus

Probab=99.91  E-value=3.1e-25  Score=201.03  Aligned_cols=134  Identities=33%  Similarity=0.652  Sum_probs=84.9

Q ss_pred             CCccccCcccccccChHHHHhhHhcccCC---CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhh
Q psy2973         165 ENKFKCQFCPMWFEQRGKRRKHVNGVHLK---IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTL  241 (514)
Q Consensus       165 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~---~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L  241 (514)
                      ...|+|+.||+.+.+.+.|.+|.+ .|..   .+.+.|++|++.|.+...|+.|+ ++|+  -++.|.+||+.|+....|
T Consensus       128 ~~r~~c~eCgk~ysT~snLsrHkQ-~H~~~~s~ka~~C~~C~K~YvSmpALkMHi-rTH~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  128 HPRYKCPECGKSYSTSSNLSRHKQ-THRSLDSKKAFSCKYCGKVYVSMPALKMHI-RTHT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             CCceeccccccccccccccchhhc-ccccccccccccCCCCCceeeehHHHhhHh-hccC--CCcccccccccccchHHh
Confidence            345677777777777777777765 4532   34566666666666666666665 4554  356666666666666666


Q ss_pred             hhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhh
Q psy2973         242 KVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       242 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      +-|+|+|+|++||.|+.|+++|.++++|+.||++|.+.++|+|..|+|+|...+.|.+|..
T Consensus       204 QGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  204 QGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             hcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            6666666666666666666666666666666666666666666666666666666666654

>KOG3623|consensus

Probab=99.84  E-value=7.1e-22  Score=198.31  Aligned_cols=108  Identities=28%  Similarity=0.653  Sum_probs=88.9

Q ss_pred             ccccCcccccccChHHHHhhHhcccC-CCCceeccCCCcccccHHHHHHHHHHhhcC-------------CCCeeccccc
Q psy2973         167 KFKCQFCPMWFEQRGKRRKHVNGVHL-KIKRFKCEVCPMKFHRQVSLKKHVEAVHLK-------------LKPCKCEVCG  232 (514)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~~h~-~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~-------------~k~~~C~~C~  232 (514)
                      ...|++|++.+.....|+.|+...|. .+..|.|..|.++|..+..|.+|| ..|..             .+.|+|.+||
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccccc
Confidence            46799999999988899999876664 356688999999999999999998 45532             2568888888


Q ss_pred             ccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHH
Q psy2973         233 KSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNM  275 (514)
Q Consensus       233 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  275 (514)
                      +.|..+..|+.|+|+|.|++||.|+.|+|.|.....+..||..
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            8888888888888888888888888888888888888888753

>KOG3623|consensus

Probab=99.80  E-value=3.1e-20  Score=186.60  Aligned_cols=108  Identities=30%  Similarity=0.637  Sum_probs=94.1

Q ss_pred             ceeccCCCcccccHHHHHHHHHHhhcC-CCCeecccccccccChhhhhhhhhhccC-------------CcccccCCCcc
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVEAVHLK-LKPCKCEVCGKSFSNNSTLKVHSTTHAD-------------QGRFKCPICGK  261 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~~~H~~-~k~~~C~~C~~~f~~~~~L~~H~~~h~~-------------~~~~~C~~C~~  261 (514)
                      ...|++|++.+.....|+.|+...|.. +..|.|..|.++|.++..|.+||.+|..             .+.|+|.+|||
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            368999999999999999998777754 5568999999999999999999998843             34589999999


Q ss_pred             cccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhh
Q psy2973         262 HIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       262 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      +|..+..|+.|+|+|.|++||.|+.|++.|....++..||..
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence            999999999999999999999999999999998888888864

>KOG3576|consensus

Probab=99.57  E-value=7.6e-16  Score=132.72  Aligned_cols=113  Identities=29%  Similarity=0.577  Sum_probs=78.1

Q ss_pred             CCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHH
Q psy2973         193 KIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDH  272 (514)
Q Consensus       193 ~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  272 (514)
                      +...|.|.+|++.|.-..-|.+|+ ..|...+.|-|..||+.|...-+|++|+++|++.+||+|..|+++|..+-.|..|
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            345678888888888888888887 6777777777888888887777788888888777778777777777777777777


Q ss_pred             HHHhcCC-----------CcccccccccccCChHHHHHhhhhccc
Q psy2973         273 MNMHSGD-----------VKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       273 ~~~h~~~-----------~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      ++.-+|.           +.|.|..||.+-.....+..|+..|+.
T Consensus       193 l~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  193 LKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            7655442           334555555554444444455444443

>KOG3576|consensus

Probab=99.57  E-value=1e-15  Score=131.97  Aligned_cols=118  Identities=25%  Similarity=0.546  Sum_probs=93.2

Q ss_pred             ccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhh
Q psy2973         162 SFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTL  241 (514)
Q Consensus       162 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L  241 (514)
                      ..+...|.|.+|++.|.-...|.+|++ .|...+.+.|..|++.|.+..+|++|+ +.|+|.+||+|..|+++|..+-.|
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~k-ch~~vkr~lct~cgkgfndtfdlkrh~-rthtgvrpykc~~c~kaftqrcsl  189 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLK-CHSDVKRHLCTFCGKGFNDTFDLKRHT-RTHTGVRPYKCSLCEKAFTQRCSL  189 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhh-hccHHHHHHHhhccCcccchhhhhhhh-ccccCccccchhhhhHHHHhhccH
Confidence            335567888888888888888888887 688888888888888888888888887 678888888888888888888888


Q ss_pred             hhhhhhccC-----------CcccccCCCcccccccccHHHHHHHhcCCCc
Q psy2973         242 KVHSTTHAD-----------QGRFKCPICGKHIRHKQTFDDHMNMHSGDVK  281 (514)
Q Consensus       242 ~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  281 (514)
                      ..|++.-++           .+.|.|..||.+-.....+..|++.|+...|
T Consensus       190 eshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  190 ESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             HHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCH
Confidence            888754333           3558888888888888888888888876544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=1.4e-10  Score=119.10  Aligned_cols=116  Identities=21%  Similarity=0.488  Sum_probs=71.6

Q ss_pred             cccCc--CCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHH
Q psy2973         370 FQCND--CGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHM  447 (514)
Q Consensus       370 ~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~  447 (514)
                      ..|+.  ||..| .+..|..|        +.|+.|++.|. ...|..|+...|     ++|.|+ |++.+ .+..|..|+
T Consensus       434 V~Cp~~~Cg~v~-~r~el~~H--------~~C~~Cgk~f~-~s~LekH~~~~H-----kpv~Cp-Cg~~~-~R~~L~~H~  496 (567)
T PLN03086        434 VVCPHDGCGIVL-RVEEAKNH--------VHCEKCGQAFQ-QGEMEKHMKVFH-----EPLQCP-CGVVL-EKEQMVQHQ  496 (567)
T ss_pred             eeCCccccccee-eccccccC--------ccCCCCCCccc-hHHHHHHHHhcC-----CCccCC-CCCCc-chhHHHhhh
Confidence            34553  66666 23333444        24777776664 455677766543     457777 77544 556777777


Q ss_pred             HhhcCCCCcccccccccccccCC----------hhhHHHHhcccc---cccccccccccCHHHHHHhhhhhh
Q psy2973         448 KVHEKNRNMLDSSCNECGKQYKW----------ESFLQKHKKICT---TTCKSCGKRYSSIYVLRNHVKSCY  506 (514)
Q Consensus       448 ~~H~~~~~~~~~~C~~C~~~f~~----------~~~L~~H~~~h~---~~C~~C~~~f~~~~~l~~H~~~h~  506 (514)
                      .+|.+.++   +.|..|++.|..          .+.|..|...+.   +.|..||+.|..+. +..|+...|
T Consensus       497 ~thCp~Kp---i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlrd-m~~H~~~~h  564 (567)
T PLN03086        497 ASTCPLRL---ITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLKE-MDIHQIAVH  564 (567)
T ss_pred             hccCCCCc---eeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeehh-HHHHHHHhh
Confidence            77777666   677777777741          346777776654   67777777776554 666766554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.07  E-value=5e-10  Score=115.08  Aligned_cols=107  Identities=20%  Similarity=0.424  Sum_probs=73.4

Q ss_pred             ceeccCCCcccccHHHHHHHHHHhhcCCCCeeccc--ccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHH
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM  273 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  273 (514)
                      .-.|+.|...... ..|..|. .... -..-.|+.  |+..|. +..+..|         +.|+.|++.|. ...|..|+
T Consensus       407 ~V~C~NC~~~i~l-~~l~lHe-~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCKHYIPS-RSIALHE-AYCS-RHNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCCCccch-hHHHHHH-hhCC-CcceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHHHHH
Confidence            3568888876653 4455674 2222 12345763  888773 3444444         47888888885 56788888


Q ss_pred             HHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCCcCC
Q psy2973         274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYK  320 (514)
Q Consensus       274 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~  320 (514)
                      .+++  .++.|+ ||+.+ .+..|..|+.+|.+.+++.|+.|++.|.
T Consensus       473 ~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~  515 (567)
T PLN03086        473 KVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQ  515 (567)
T ss_pred             HhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccc
Confidence            8875  678888 88654 5678888888888888888888888774

>PHA00733 hypothetical protein

Probab=98.93  E-value=1.3e-09  Score=91.64  Aligned_cols=82  Identities=17%  Similarity=0.268  Sum_probs=49.3

Q ss_pred             CCcccccccccccCChHHHHHh--h---hhcccCCcccCCcCCCcCCCHHHHHHHHHhcCCccccCccccccCCHHHHHH
Q psy2973         279 DVKYTCTYCEKSFLYKKSLKHH--L---FVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRR  353 (514)
Q Consensus       279 ~~~~~C~~C~~~f~~~~~L~~H--~---~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~l~~  353 (514)
                      .+++.|.+|.+.|.....|..|  +   ..+++.+||.|+.|++.|.+...|..|++.+..+|.|+.|++.|.....|.+
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~~~~C~~CgK~F~~~~sL~~  117 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSKVCPVCGKEFRNTDSTLD  117 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCCcCccCCCCCCccCCHHHHHH
Confidence            3455666666555555444443  1   1223456677777777777777777776665555666666666666666666


Q ss_pred             HHHHhcC
Q psy2973         354 HMENMHN  360 (514)
Q Consensus       354 H~~~~H~  360 (514)
                      |+...|+
T Consensus       118 H~~~~h~  124 (128)
T PHA00733        118 HVCKKHN  124 (128)
T ss_pred             HHHHhcC
Confidence            6666654

>PHA00733 hypothetical protein

Probab=98.85  E-value=2.5e-09  Score=89.88  Aligned_cols=85  Identities=21%  Similarity=0.398  Sum_probs=48.5

Q ss_pred             CccccccccccCChHHHHHH--HHhhcCCCCCCcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhh
Q psy2973         396 KLNCVHCQAIFTNKQRLNYH--ILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESF  473 (514)
Q Consensus       396 ~~~C~~C~~~f~~~~~L~~H--~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~  473 (514)
                      ++.|.+|...|.+...|..|  +..+......+||.|+.|++.|.+.+.|..|++.|.  .+   |.|+.|+++|.+...
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h~--~~---~~C~~CgK~F~~~~s  114 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYTE--HS---KVCPVCGKEFRNTDS  114 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcCC--cC---ccCCCCCCccCCHHH
Confidence            56677777666666665555  211111111256666666666666666666666552  22   566666666666666


Q ss_pred             HHHHhccccccc
Q psy2973         474 LQKHKKICTTTC  485 (514)
Q Consensus       474 L~~H~~~h~~~C  485 (514)
                      |..|+...+..|
T Consensus       115 L~~H~~~~h~~~  126 (128)
T PHA00733        115 TLDHVCKKHNIC  126 (128)
T ss_pred             HHHHHHHhcCcc
Confidence            666665554443

>PHA02768 hypothetical protein; Provisional

Probab=98.67  E-value=7.9e-09  Score=71.13  Aligned_cols=44  Identities=16%  Similarity=0.409  Sum_probs=35.1

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHH
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQ  475 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~  475 (514)
                      .|+|+.||+.|...++|..|+++|+  ++   |+|..|++.|...+.|+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~---~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TN---LKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--Cc---ccCCcccceecccceeE
Confidence            4788888888888888888888887  34   78888888888776654

>KOG3993|consensus

Probab=98.61  E-value=3.4e-09  Score=101.93  Aligned_cols=111  Identities=21%  Similarity=0.418  Sum_probs=66.3

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCccccc---CCCcccccccccHH
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC---PICGKHIRHKQTFD  270 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C---~~C~~~f~~~~~L~  270 (514)
                      ...|.|..|...|.+...|.+|. -.-...-.|+|++|+|.|+-..+|..|.|.|....--.=   +-=.+...+....+
T Consensus       265 iGdyiCqLCK~kYeD~F~LAQHr-C~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  265 IGDYICQLCKEKYEDAFALAQHR-CPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHHHHHHHHHhhhhHHHHhhcc-CCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            34588999999999999999884 222222358888888888888888888888843211000   00000000000000


Q ss_pred             HHHHH--hcCCCcccccccccccCChHHHHHhhhhcc
Q psy2973         271 DHMNM--HSGDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       271 ~H~~~--h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      .--+.  -..+.-|.|..|++.|++...|+.|+.+|.
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhh
Confidence            00000  012235888888888888888888887775

>KOG3993|consensus

Probab=98.61  E-value=9.2e-09  Score=98.96  Aligned_cols=53  Identities=23%  Similarity=0.470  Sum_probs=31.4

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcc
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      .|.|..|...|.+.-.|.+|.-..---.-|+|++|+|.|+...+|..|.+.|.
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccC
Confidence            36666666666666666666422111123666666666666666666666664

>PHA02768 hypothetical protein; Provisional

Probab=98.54  E-value=2.5e-08  Score=68.69  Aligned_cols=36  Identities=25%  Similarity=0.660  Sum_probs=14.3

Q ss_pred             ccCCCcccccccccHHHHHHHhcCCCcccccccccccC
Q psy2973         255 KCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFL  292 (514)
Q Consensus       255 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~  292 (514)
                      .|+.||+.|...+.|..||++|+  ++|.|..|++.|.
T Consensus         7 ~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~   42 (55)
T PHA02768          7 ECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISL   42 (55)
T ss_pred             CcchhCCeeccHHHHHHHHHhcC--CcccCCcccceec
Confidence            34444444444444444444433  2334444444333

>PHA00616 hypothetical protein

Probab=98.29  E-value=2.8e-07  Score=60.31  Aligned_cols=32  Identities=22%  Similarity=0.276  Sum_probs=30.2

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCCCCCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQKNLSH  514 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~~~~c~  514 (514)
                      |+|+.||+.|..++.|+.|+++|||++|+.|+
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            78999999999999999999999999999874

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.24  E-value=5.9e-07  Score=52.75  Aligned_cols=24  Identities=46%  Similarity=1.029  Sum_probs=13.5

Q ss_pred             HHHHHHHhcCCCcccccccccccC
Q psy2973         269 FDDHMNMHSGDVKYTCTYCEKSFL  292 (514)
Q Consensus       269 L~~H~~~h~~~~~~~C~~C~~~f~  292 (514)
                      |..|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            455555555555555555555554

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.20  E-value=8.2e-07  Score=52.14  Aligned_cols=25  Identities=40%  Similarity=0.913  Sum_probs=18.1

Q ss_pred             HHHHHHHhhcCCCCcccccccccccccC
Q psy2973         442 NLKRHMKVHEKNRNMLDSSCNECGKQYK  469 (514)
Q Consensus       442 ~L~~H~~~H~~~~~~~~~~C~~C~~~f~  469 (514)
                      +|..||++|++++|   |.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~---~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKP---YKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSS---EEESSSSEEES
T ss_pred             CHHHHhhhcCCCCC---CCCCCCcCeeC
Confidence            46777777777777   67777777775

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.13  E-value=4e-06  Score=59.16  Aligned_cols=51  Identities=25%  Similarity=0.444  Sum_probs=33.4

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHhhc
Q psy2973         397 LNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       397 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      |.|++|++ ..+...|..|+...|..+. +.+.|++|...+.  .+|..|+..++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~-~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSES-KNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCC-CCccCCCchhhhh--hHHHHHHHHhc
Confidence            56677776 4445667777666776643 4577888877544  37777777665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.00  E-value=4e-06  Score=63.76  Aligned_cols=44  Identities=34%  Similarity=0.623  Sum_probs=21.0

Q ss_pred             ccccccccccCChHHHHHHHHh-hcCCCCcccccccccccccCChhhHHHHhcc
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKV-HEKNRNMLDSSCNECGKQYKWESFLQKHKKI  480 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~-H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  480 (514)
                      |.|+.|++.|.+.++|..|++. |.+      +.|+.||++|.   .|..|.++
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~------~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL------TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC------CccCCCCCEeC---Chhhhhcc
Confidence            4455555555555555555543 321      34555555554   24444433

>PHA00616 hypothetical protein

Probab=97.99  E-value=3.4e-06  Score=55.30  Aligned_cols=29  Identities=21%  Similarity=0.474  Sum_probs=23.7

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      ||+|+.||+.|...++|..|++.|+++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            57888888888888888888888888777

>PHA00732 hypothetical protein

Probab=97.94  E-value=6e-06  Score=62.79  Aligned_cols=48  Identities=21%  Similarity=0.405  Sum_probs=26.2

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHhhcC
Q psy2973         397 LNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       397 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      |.|..|++.|.+...|..|++..|.     ++.|+.|++.|.   .|..|++++..
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---ChhhhhcccCC
Confidence            4555555555555555555543332     235666666665   46666655443

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.83  E-value=3.4e-05  Score=54.38  Aligned_cols=51  Identities=29%  Similarity=0.553  Sum_probs=29.6

Q ss_pred             cccCccccccCCHHHHHHHHHHhcCCCCCCCCCCcccCcCCcccCChHHHHHHHHhhc
Q psy2973         336 FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH  393 (514)
Q Consensus       336 ~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h  393 (514)
                      |.|+.|++ ..+...|..|....|..+    .+.+.|++|...+.  .+|..|+...|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~----~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSE----SKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCC----CCCccCCCchhhhh--hHHHHHHHHhc
Confidence            56666666 444566666666666542    33566777765433  36666665444

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.62  E-value=3.7e-05  Score=43.73  Aligned_cols=23  Identities=48%  Similarity=0.974  Sum_probs=13.5

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            45666666666666666666553

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.59  E-value=3.8e-05  Score=61.99  Aligned_cols=72  Identities=22%  Similarity=0.476  Sum_probs=18.3

Q ss_pred             cCcCCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHhh
Q psy2973         372 CNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       372 C~~C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |..|+..|.+...|..|+...|+....   ....+.....+..+++..-  .  ..+.|.+|++.|.+...|..||+.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~--~--~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKV--K--ESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccc---ccccccccccccccccccc--C--CCCCCCccCCCCcCHHHHHHHHcCc
Confidence            556666666666666666555543221   1111223333333333111  0  2477888888888888888888765

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.46  E-value=6.7e-05  Score=42.62  Aligned_cols=22  Identities=36%  Similarity=0.739  Sum_probs=13.6

Q ss_pred             cccccccccccCHHHHHHhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKS  504 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~  504 (514)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4566666666666666666655

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG1146|consensus

Probab=97.34  E-value=6.6e-05  Score=82.95  Aligned_cols=77  Identities=22%  Similarity=0.380  Sum_probs=57.5

Q ss_pred             cCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCC------------------------CC
Q psy2973         170 CQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL------------------------KP  225 (514)
Q Consensus       170 C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~------------------------k~  225 (514)
                      |..|+..+.....+..|+..+|...+.|.|+.|+..|.....|-.||+..|...                        ++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            566777777777777787777877888999999999999999999997766432                        45


Q ss_pred             eecccccccccChhhhhhhhh
Q psy2973         226 CKCEVCGKSFSNNSTLKVHST  246 (514)
Q Consensus       226 ~~C~~C~~~f~~~~~L~~H~~  246 (514)
                      |.|..|..++.....|.+|+.
T Consensus       519 ~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHH
Confidence            666666666666666666653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.31  E-value=0.00016  Score=41.34  Aligned_cols=23  Identities=30%  Similarity=0.862  Sum_probs=13.1

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666655

...

>KOG2231|consensus

Probab=97.30  E-value=0.00047  Score=72.48  Aligned_cols=54  Identities=26%  Similarity=0.571  Sum_probs=42.4

Q ss_pred             cccccccccCChHHHHHHHHhhcCCCCccccccccc------ccccCChhhHHHHhcccccccc--ccc
Q psy2973         429 KCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNEC------GKQYKWESFLQKHKKICTTTCK--SCG  489 (514)
Q Consensus       429 ~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C------~~~f~~~~~L~~H~~~h~~~C~--~C~  489 (514)
                      .|..|...|.....|.+|++.++       |.|-+|      +.-|.....|..|-|..+|.|.  .|.
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-------~~chfC~~~~~~neyy~~~~dLe~HfR~~HflCE~~~C~  245 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-------EFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFLCEEEFCR  245 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-------eheeecCcccccchhcccchHHHHHhhhcCccccccccc
Confidence            68889889999999999988776       556666      3556777888999888888877  565

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.30  E-value=0.00014  Score=58.60  Aligned_cols=73  Identities=23%  Similarity=0.430  Sum_probs=17.4

Q ss_pred             ccCccccccCCHHHHHHHHHHhcCCCCCCCCCCcccCcCCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHH
Q psy2973         337 QCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHI  416 (514)
Q Consensus       337 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~  416 (514)
                      +|..|+..|.+...|..|+...|.....          ....+.....+..+++..-...+.|.+|++.|.+...|..||
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----------~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm   70 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----------DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHM   70 (100)
T ss_dssp             ----------------------------------------------------------SSEEBSSSS-EESSHHHHHHHH
T ss_pred             Cccccccccccccccccccccccccccc----------cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHH
Confidence            4677777777777777777766653211          111122333344444322223577777777777777777777


Q ss_pred             Hhh
Q psy2973         417 LTK  419 (514)
Q Consensus       417 ~~~  419 (514)
                      +..
T Consensus        71 ~~~   73 (100)
T PF12756_consen   71 RSK   73 (100)
T ss_dssp             HHT
T ss_pred             cCc
Confidence            753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.28  E-value=0.00015  Score=41.51  Aligned_cols=24  Identities=33%  Similarity=0.652  Sum_probs=16.4

Q ss_pred             cccccccccccCHHHHHHhhhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCY  506 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~  506 (514)
                      |.|++|++.|.+...|+.|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            467777777777777777777765

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.27  E-value=0.00016  Score=42.88  Aligned_cols=25  Identities=24%  Similarity=0.683  Sum_probs=16.8

Q ss_pred             cccccccccccCChHHHHHHHHhhc
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      ||+|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777766654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.66  E-value=0.0012  Score=39.04  Aligned_cols=23  Identities=30%  Similarity=0.639  Sum_probs=13.1

Q ss_pred             ccccccccccCChHHHHHhhhhc
Q psy2973         282 YTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       282 ~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      |.|..|++.|.+...|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            55555555555555555555544

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.45  E-value=0.0013  Score=61.76  Aligned_cols=70  Identities=24%  Similarity=0.414  Sum_probs=36.9

Q ss_pred             CCceeccC--CCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHH
Q psy2973         194 IKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDD  271 (514)
Q Consensus       194 ~k~~~C~~--C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  271 (514)
                      +|||+|++  |++.+.....|+-|+.--|-..+...=+          .-..|...-...+||.|++|+|.+.+...|+-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p----------~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP----------SPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC----------CccccccccccCCceeccccchhhccCcccee
Confidence            47888865  8888888888888864333211111000          01111111234456666666666666665555


Q ss_pred             HH
Q psy2973         272 HM  273 (514)
Q Consensus       272 H~  273 (514)
                      |.
T Consensus       417 Hr  418 (423)
T COG5189         417 HR  418 (423)
T ss_pred             cc
Confidence            53

>KOG2231|consensus

Probab=96.43  E-value=0.0086  Score=63.25  Aligned_cols=36  Identities=31%  Similarity=0.615  Sum_probs=20.8

Q ss_pred             cccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhh
Q psy2973         254 FKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       254 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      +.|.+|+..|....            ..-.|..| -.|.+...|+.|+.
T Consensus       100 ~~C~~C~~~~~~~~------------~~~~~~~c-~~~~s~~~Lk~H~~  135 (669)
T KOG2231|consen  100 HSCHICDRRFRALY------------NKKECLHC-TEFKSVENLKNHMR  135 (669)
T ss_pred             hhcCccccchhhhc------------ccCCCccc-cchhHHHHHHHHHH
Confidence            56777766664222            11256666 66666667777764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.40  E-value=0.0021  Score=36.76  Aligned_cols=24  Identities=25%  Similarity=0.353  Sum_probs=18.1

Q ss_pred             cccccccccccCHHHHHHhhhhhhC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYG  507 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~g  507 (514)
                      |+|+.|++... ...|..|++.|||
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            57888888887 8888888888775

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.35  E-value=0.0024  Score=42.84  Aligned_cols=30  Identities=23%  Similarity=0.345  Sum_probs=22.7

Q ss_pred             ccccccccccccCHHHHHHhhhhhhCCCCC
Q psy2973         482 TTTCKSCGKRYSSIYVLRNHVKSCYGQQKN  511 (514)
Q Consensus       482 ~~~C~~C~~~f~~~~~l~~H~~~h~ge~~~  511 (514)
                      +..|++|+..+.+...|+.|+.++|+.||-
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            378999999999999999999999998873

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.31  E-value=0.0022  Score=43.07  Aligned_cols=30  Identities=20%  Similarity=0.526  Sum_probs=21.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      .|-.|++|+..+.+..+|++|+.++|+.+|
T Consensus        23 ~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   23 QPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             --EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            788999999999999999999988888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.29  E-value=0.0011  Score=62.21  Aligned_cols=56  Identities=25%  Similarity=0.637  Sum_probs=35.1

Q ss_pred             CccccCc--cccccCCHHHHHHHHHHhcCCCCC-------------CCCCCcccCcCCcccCChHHHHHHH
Q psy2973         334 SIFQCRI--CDKILSNIQGIRRHMENMHNSDKD-------------NTERPFQCNDCGSTFRLKRHLNSHI  389 (514)
Q Consensus       334 ~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~~-------------~~~~~~~C~~C~~~f~~~~~L~~H~  389 (514)
                      +||+|++  |++.+.+...|+.|+..-|.....             ...+||.|+.|++.+.....|+-|.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            5788876  888888888888888766633211             1235555555555555555555553

>smart00355 ZnF_C2H2 zinc finger

Probab=96.25  E-value=0.0036  Score=36.15  Aligned_cols=23  Identities=35%  Similarity=0.886  Sum_probs=13.6

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |.|+.|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666544

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.16  E-value=0.0032  Score=36.36  Aligned_cols=23  Identities=22%  Similarity=0.798  Sum_probs=14.9

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45666666666666666666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.04  E-value=0.0045  Score=35.35  Aligned_cols=23  Identities=43%  Similarity=0.873  Sum_probs=12.9

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      |+|+.|+.... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666654

>smart00355 ZnF_C2H2 zinc finger

Probab=96.03  E-value=0.0046  Score=35.71  Aligned_cols=23  Identities=30%  Similarity=0.723  Sum_probs=13.6

Q ss_pred             cccccccccccCHHHHHHhhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSC  505 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h  505 (514)
                      |.|..|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            34566666666666666666544

>KOG2482|consensus

Probab=95.98  E-value=0.022  Score=54.35  Aligned_cols=71  Identities=15%  Similarity=0.162  Sum_probs=37.8

Q ss_pred             ccccccccccCChHHHHHHHHhhcC-C--CCcccccccccccccCChhhHHHHhccc--ccccccccccccCHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVHEK-N--RNMLDSSCNECGKQYKWESFLQKHKKIC--TTTCKSCGKRYSSIYVLRNHV  502 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H~~-~--~~~~~~~C~~C~~~f~~~~~L~~H~~~h--~~~C~~C~~~f~~~~~l~~H~  502 (514)
                      ..|-.|.........|..||++-|. +  +....|     +.-|.+.-.+..-.|..  .-.|-.|+-+|.....|..||
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~-----~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm  354 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDY-----SLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHM  354 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhHHhhcccc-----ccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhc
Confidence            5788888887788888888885443 1  000000     11122222222222221  135666666677766666666


Q ss_pred             h
Q psy2973         503 K  503 (514)
Q Consensus       503 ~  503 (514)
                      .
T Consensus       355 ~  355 (423)
T KOG2482|consen  355 V  355 (423)
T ss_pred             c
Confidence            4

>KOG2482|consensus

Probab=95.70  E-value=0.031  Score=53.31  Aligned_cols=89  Identities=18%  Similarity=0.328  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCcccCcCCccc-CChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCCCCCC
Q psy2973         348 IQGIRRHMENMHNSDKDNTERPFQCNDCGSTF-RLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK  426 (514)
Q Consensus       348 ~~~l~~H~~~~H~~~~~~~~~~~~C~~C~~~f-~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k  426 (514)
                      ...|.+|++.. .    ......+|-.|...+ -.++....|+-..|....-=   .........|..|++.     ...
T Consensus       128 ~eaLeqqQ~Er-e----dt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGl---pDniVyvnelLehLke-----kL~  194 (423)
T KOG2482|consen  128 KEALEQQQKER-E----DTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGL---PDNIVYVNELLEHLKE-----KLE  194 (423)
T ss_pred             HHHHHHHHHHh-c----CCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCC---CcceeeHHHHHHHHHH-----HHh
Confidence            45566666443 2    124557899998765 46778888888777521000   0111223445666653     223


Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKV  449 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~  449 (514)
                      .+.|-.|.+.|..+..|+.||+.
T Consensus       195 r~~CLyCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  195 RLRCLYCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hheeeeeccccCCcHHHHHHHHh
Confidence            46788888888888888888774

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.68  E-value=0.024  Score=53.99  Aligned_cols=144  Identities=25%  Similarity=0.434  Sum_probs=76.4

Q ss_pred             ceeccC--CCcccccHHHHHHHHHHhhcCCCCeecccccc---cccChhhhhhhhhhccCCcccccCCCcccccccccHH
Q psy2973         196 RFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGK---SFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFD  270 (514)
Q Consensus       196 ~~~C~~--C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~---~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  270 (514)
                      .|.|+.  |..+...+..|+.|....|.   .+.|.+|-.   .|...                      -..-+...|.
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~---~~~C~~C~~nKk~F~~E----------------------~~lF~~~~Lr  205 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG---FVLCSECIGNKKDFWNE----------------------IRLFRSSTLR  205 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC---cEEhHhhhcCcccCccc----------------------eeeeeccccc
Confidence            366754  66666667778888766553   356666632   22111                      1111223333


Q ss_pred             HHHHHhcCCCc----ccccccccccCChHHHHHhhhhcccCCcccCCcCCC-------cCCCHHHHHHHHHhcCCccccC
Q psy2973         271 DHMNMHSGDVK----YTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDR-------LYKSDYLRRKHERSHSSIFQCR  339 (514)
Q Consensus       271 ~H~~~h~~~~~----~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~C~  339 (514)
                      .|...-..+..    -.|..|...|.+-..|..|++.-+.    .|-+|++       -|.+-.+|..|.+..+  |.|.
T Consensus       206 ~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h--y~ct  279 (493)
T COG5236         206 DHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAH--YCCT  279 (493)
T ss_pred             ccccCCccccCcCCCchhhhccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCc--eEEE
Confidence            33332211111    2566777777777777777664332    2444442       3556666777766544  3332


Q ss_pred             c--c----ccccCCHHHHHHHHHHhcCCCCCCCCCCc
Q psy2973         340 I--C----DKILSNIQGIRRHMENMHNSDKDNTERPF  370 (514)
Q Consensus       340 ~--C----~~~f~~~~~l~~H~~~~H~~~~~~~~~~~  370 (514)
                      .  |    -.+|.....|..|+...|.......++++
T Consensus       280 ~qtc~~~k~~vf~~~~el~~h~~~~h~~~~~~~~~~~  316 (493)
T COG5236         280 FQTCRVGKCYVFPYHTELLEHLTRFHKVNARLSEIPR  316 (493)
T ss_pred             EEEEecCcEEEeccHHHHHHHHHHHhhcccccCcCCC
Confidence            1  2    14678888888888888765444334333

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.60  E-value=0.0074  Score=34.79  Aligned_cols=23  Identities=39%  Similarity=0.648  Sum_probs=15.6

Q ss_pred             cccccccccccCHHHHHHhhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSC  505 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h  505 (514)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            45677777777777777777653

>KOG2785|consensus

Probab=95.50  E-value=0.028  Score=54.74  Aligned_cols=26  Identities=19%  Similarity=0.528  Sum_probs=21.5

Q ss_pred             CCCCcccCcCCcccCChHHHHHHHHh
Q psy2973         366 TERPFQCNDCGSTFRLKRHLNSHINR  391 (514)
Q Consensus       366 ~~~~~~C~~C~~~f~~~~~L~~H~~~  391 (514)
                      .+.++.|..|.+.|.+......|+..
T Consensus        65 ~~~~~~c~~c~k~~~s~~a~~~hl~S   90 (390)
T KOG2785|consen   65 AESVVYCEACNKSFASPKAHENHLKS   90 (390)
T ss_pred             cccceehHHhhccccChhhHHHHHHH
Confidence            45678999999999998888888764

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.40  E-value=0.022  Score=54.30  Aligned_cols=70  Identities=21%  Similarity=0.471  Sum_probs=37.6

Q ss_pred             ccccccccCChHHHHHHHHhhcCCCCccccccccccc-------ccCChhhHHHHhcccccccc--ccc----ccccCHH
Q psy2973         430 CEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGK-------QYKWESFLQKHKKICTTTCK--SCG----KRYSSIY  496 (514)
Q Consensus       430 C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~-------~f~~~~~L~~H~~~h~~~C~--~C~----~~f~~~~  496 (514)
                      |..|...|-+-..|..|+|.-|.       .|-+|++       -|.+-..|..|.+.-+|.|.  .|-    ..|....
T Consensus       223 C~FC~~~FYdDDEL~~HcR~~HE-------~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~  295 (493)
T COG5236         223 CIFCKIYFYDDDELRRHCRLRHE-------ACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHT  295 (493)
T ss_pred             hhhccceecChHHHHHHHHhhhh-------hhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHH
Confidence            55566556666666666554332       2444432       25555566666665555543  232    3566666


Q ss_pred             HHHHhhhhhh
Q psy2973         497 VLRNHVKSCY  506 (514)
Q Consensus       497 ~l~~H~~~h~  506 (514)
                      .|..|+..-|
T Consensus       296 el~~h~~~~h  305 (493)
T COG5236         296 ELLEHLTRFH  305 (493)
T ss_pred             HHHHHHHHHh
Confidence            6777765444

>KOG1146|consensus

Probab=95.29  E-value=0.0058  Score=68.20  Aligned_cols=134  Identities=21%  Similarity=0.299  Sum_probs=85.1

Q ss_pred             cCcCCcccCChHHHHHHHHhhcC--CCccccccccccCChHHHHHHHHhhcCC----------------------CCCCc
Q psy2973         372 CNDCGSTFRLKRHLNSHINRLHK--LKLNCVHCQAIFTNKQRLNYHILTKHSG----------------------PNYKA  427 (514)
Q Consensus       372 C~~C~~~f~~~~~L~~H~~~~h~--~~~~C~~C~~~f~~~~~L~~H~~~~H~~----------------------~~~k~  427 (514)
                      |.-|+..+.....+..|+...+.  ..|.|+.|+..|.....|..||+..|..                      ..+++
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            33344444455555555544444  3567777777777777777777765541                      12478


Q ss_pred             ccccccccccCChHHHHHHHHh--hcC--------------------------------------CCCcccccccccccc
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKV--HEK--------------------------------------NRNMLDSSCNECGKQ  467 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~--H~~--------------------------------------~~~~~~~~C~~C~~~  467 (514)
                      |.|..|..++....+|..||..  |..                                      .+++..+.|..|+..
T Consensus       519 ~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~ye  598 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYE  598 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcch
Confidence            9999999999999999999873  311                                      112234678888888


Q ss_pred             cCChhhHHHHhcccc-----cccccccccccCHHHHHHhhhhh
Q psy2973         468 YKWESFLQKHKKICT-----TTCKSCGKRYSSIYVLRNHVKSC  505 (514)
Q Consensus       468 f~~~~~L~~H~~~h~-----~~C~~C~~~f~~~~~l~~H~~~h  505 (514)
                      .+-..+|..|+..-+     --|-.|.-.+.....+..+-+-+
T Consensus       599 tniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  599 TNIARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             hhhhhccccccccCCCCCChHHHhhhcchhhccccccCcCCCC
Confidence            777777888876432     34555666666555555555544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.86  E-value=0.0078  Score=35.50  Aligned_cols=22  Identities=41%  Similarity=0.899  Sum_probs=12.7

Q ss_pred             ccccccccccCChHHHHHHHHh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKV  449 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~  449 (514)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4556666666666666555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=94.54  E-value=0.022  Score=49.81  Aligned_cols=37  Identities=24%  Similarity=0.793  Sum_probs=24.0

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCC
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLY  293 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  293 (514)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            56666 665   55566667777766666777767666543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.43  E-value=0.021  Score=33.64  Aligned_cols=21  Identities=43%  Similarity=0.770  Sum_probs=11.3

Q ss_pred             ccccccccccCHHHHHHhhhh
Q psy2973         484 TCKSCGKRYSSIYVLRNHVKS  504 (514)
Q Consensus       484 ~C~~C~~~f~~~~~l~~H~~~  504 (514)
                      .|..|++.|.+...|..|+++
T Consensus         3 ~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    3 YCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             BBTTTTBBBSSHHHHHCCTTS
T ss_pred             CcccCCCCcCCHHHHHHHHcc
Confidence            455555555555555555543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=94.37  E-value=0.061  Score=52.46  Aligned_cols=26  Identities=31%  Similarity=0.492  Sum_probs=20.0

Q ss_pred             CCCcccccccccccCChHHHHHhhhh
Q psy2973         278 GDVKYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       278 ~~~~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      ++-++.|..|.+.|.+......|+..
T Consensus        65 ~~~~~~c~~c~k~~~s~~a~~~hl~S   90 (390)
T KOG2785|consen   65 AESVVYCEACNKSFASPKAHENHLKS   90 (390)
T ss_pred             cccceehHHhhccccChhhHHHHHHH
Confidence            34567888888888888888888763

>PRK04860 hypothetical protein; Provisional

Probab=94.30  E-value=0.018  Score=50.39  Aligned_cols=39  Identities=21%  Similarity=0.622  Sum_probs=32.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCCh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWE  471 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~  471 (514)
                      -+|.|. |+.   ....+.+|.++|.++++   |.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~---YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAV---YRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCcc---EECCCCCceeEEe
Confidence            368998 887   77788999999999887   8899998887644

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=93.54  E-value=0.026  Score=58.38  Aligned_cols=62  Identities=34%  Similarity=0.574  Sum_probs=35.1

Q ss_pred             ceeccCCCcccccHHHHHHHHHH-hhcCC--CCeecc--cccccccChhhhhhhhhhccCCcccccC
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVEA-VHLKL--KPCKCE--VCGKSFSNNSTLKVHSTTHADQGRFKCP  257 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~~-~H~~~--k~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~  257 (514)
                      ++.|..|...|.....|..|... .|.++  +++.|+  .|++.|.....+..|...|.+..++.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            45556666666666666666522 55555  556665  4666666666666666655555554443

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.85  E-value=0.051  Score=56.17  Aligned_cols=61  Identities=30%  Similarity=0.588  Sum_probs=34.2

Q ss_pred             CeecccccccccChhhhhhhhh--hccCC--cccccC--CCcccccccccHHHHHHHhcCCCccccc
Q psy2973         225 PCKCEVCGKSFSNNSTLKVHST--THADQ--GRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       225 ~~~C~~C~~~f~~~~~L~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      ++.|..|...|.....|..|.+  .|.++  .++.|+  .|++.|.....+..|...|.+..++.+.
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            4555555555555555555555  45555  555555  4555555555555555555555444444

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.70  E-value=0.12  Score=29.78  Aligned_cols=19  Identities=37%  Similarity=0.845  Sum_probs=10.0

Q ss_pred             cccccccccCChhhHHHHhc
Q psy2973         460 SCNECGKQYKWESFLQKHKK  479 (514)
Q Consensus       460 ~C~~C~~~f~~~~~L~~H~~  479 (514)
                      .|+.||+.| ....|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4445555544

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.92  E-value=0.16  Score=31.75  Aligned_cols=23  Identities=22%  Similarity=0.660  Sum_probs=18.4

Q ss_pred             cccccccccccCChHHHHHHHHh
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKV  449 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~  449 (514)
                      +|.|.+|+..|.+..++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF01352 KRAB: KRAB box; InterPro: IPR001909 The Krueppel-associated box (KRAB) is a domain of around 75 amino acids that is found in the N-terminal part of about one third of eukaryotic Krueppel-type C2H2 zinc finger proteins (ZFPs) []

Probab=90.62  E-value=0.082  Score=34.59  Aligned_cols=20  Identities=25%  Similarity=0.303  Sum_probs=15.6

Q ss_pred             eccCCchhhhhhhhhccccc
Q psy2973         100 IFDCQDSEWRDVLKKKQGVL  119 (514)
Q Consensus       100 ~~~~q~~~~~~v~~e~~~~~  119 (514)
                      ..+.|+++|+|||+||++++
T Consensus        18 L~~~Qk~ly~dvm~Eny~~l   37 (41)
T PF01352_consen   18 LDPAQKNLYRDVMLENYRNL   37 (41)
T ss_dssp             S-HHHHHHHHHHHHHTTTS-
T ss_pred             ccceecccchhHHHHhhccc
Confidence            34568899999999999854

It is enriched in charged amino acids and can be divided into subregions A and B, which are predicted to fold into two amphipathic alpha-helices. The KRAB A and B boxes can be separated by variable spacer segments and many KRAB proteins contain only the A box []. The functions currently known for members of the KRAB-containing protein family include transcriptional repression of RNA polymerase I, II, and III promoters, binding and splicing of RNA, and control of nucleolus function. The KRAB domain functions as a transcriptional repressor when tethered to the template DNA by a DNA-binding domain. A sequence of 45 amino acids in the KRAB A subdomain has been shown to be necessary and sufficient for transcriptional repression. The B box does not repress by itself but does potentiate the repression exerted by the KRAB A subdomain [, ]. Gene silencing requires the binding of the KRAB domain to the RING-B box-coiled coil (RBCC) domain of the KAP-1/TIF1-beta corepressor. As KAP-1 binds to the heterochromatin proteins HP1, it has been proposed that the KRAB-ZFP-bound target gene could be silenced following recruitment to heterochromatin [, ]. KRAB-ZFPs probably constitute the single largest class of transcription factors within the human genome []. Although the function of KRAB-ZFPs is largely unknown, they appear to play important roles during cell differentiation and development. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B.; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1V65_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.15  E-value=0.24  Score=28.49  Aligned_cols=19  Identities=32%  Similarity=0.761  Sum_probs=11.6

Q ss_pred             cccccccccCChHHHHHHHH
Q psy2973         429 KCEKCDMRFVTNKNLKRHMK  448 (514)
Q Consensus       429 ~C~~C~~~F~~~~~L~~H~~  448 (514)
                      .|+.|++.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            566666666 4555666654

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.45  E-value=0.57  Score=37.95  Aligned_cols=23  Identities=39%  Similarity=0.699  Sum_probs=15.8

Q ss_pred             CCCcccCcCCcccCChHHHHHHH
Q psy2973         367 ERPFQCNDCGSTFRLKRHLNSHI  389 (514)
Q Consensus       367 ~~~~~C~~C~~~f~~~~~L~~H~  389 (514)
                      +-|..|+.||.+..+..+|.+-.
T Consensus        13 ~LP~~CpiCgLtLVss~HLARSy   35 (112)
T TIGR00622        13 ELPVECPICGLTLILSTHLARSY   35 (112)
T ss_pred             CCCCcCCcCCCEEeccchHHHhh
Confidence            44667777777777777777653

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG4173|consensus

Probab=88.38  E-value=0.3  Score=43.37  Aligned_cols=22  Identities=27%  Similarity=0.535  Sum_probs=10.6

Q ss_pred             ccCcCCcccCChHHHHHHHHhh
Q psy2973         371 QCNDCGSTFRLKRHLNSHINRL  392 (514)
Q Consensus       371 ~C~~C~~~f~~~~~L~~H~~~~  392 (514)
                      .|..|.+.|.+...|..|+...
T Consensus       108 sCs~C~r~~Pt~hLLd~HI~E~  129 (253)
T KOG4173|consen  108 SCSFCKRAFPTGHLLDAHILEW  129 (253)
T ss_pred             hhHHHHHhCCchhhhhHHHHHH
Confidence            3555555555554454444433

>KOG2893|consensus

Probab=88.10  E-value=0.13  Score=46.60  Aligned_cols=47  Identities=30%  Similarity=0.576  Sum_probs=37.3

Q ss_pred             ccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhh
Q psy2973         169 KCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVH  220 (514)
Q Consensus       169 ~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H  220 (514)
                      .|..|++.|.....|..|++.     |-|+|.+|.+...+--.|..|-..+|
T Consensus        12 wcwycnrefddekiliqhqka-----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKA-----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeeecccccchhhhhhhhhhh-----ccceeeeehhhhccCCCceeehhhhh
Confidence            499999999999999998774     44899999888777777777765555

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=87.57  E-value=0.27  Score=33.68  Aligned_cols=30  Identities=30%  Similarity=0.705  Sum_probs=25.2

Q ss_pred             CCCCCcccCcCCcccCChHHHHHHHHhhcC
Q psy2973         365 NTERPFQCNDCGSTFRLKRHLNSHINRLHK  394 (514)
Q Consensus       365 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~h~  394 (514)
                      .++..+.|+.||..|.......+|+...|.
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            357788999999999999999999887774

>KOG4173|consensus

Probab=87.11  E-value=0.37  Score=42.79  Aligned_cols=83  Identities=29%  Similarity=0.577  Sum_probs=64.2

Q ss_pred             CCcccCc--CCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCC-------CCCCcccc--cccccc
Q psy2973         368 RPFQCND--CGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSG-------PNYKAWKC--EKCDMR  436 (514)
Q Consensus       368 ~~~~C~~--C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~-------~~~k~~~C--~~C~~~  436 (514)
                      ..|.|++  |...|........|....|+  -.|..|.+.|.+...|..|+...|..       .+.-.|.|  ..|+..
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            4577876  77788888888888765554  47999999999999999999876641       12356999  569999


Q ss_pred             cCChHHHHHHHHhhcC
Q psy2973         437 FVTNKNLKRHMKVHEK  452 (514)
Q Consensus       437 F~~~~~L~~H~~~H~~  452 (514)
                      |.+..+-+.||-.-|.
T Consensus       156 FkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhHHHHhcc
Confidence            9999999999865443

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=86.76  E-value=0.27  Score=33.70  Aligned_cols=29  Identities=38%  Similarity=0.661  Sum_probs=22.9

Q ss_pred             CCCccccCcccccccChHHHHhhHhcccC
Q psy2973         164 GENKFKCQFCPMWFEQRGKRRKHVNGVHL  192 (514)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~  192 (514)
                      ||.-+.|+.||..|.......+|+...|.
T Consensus        14 GE~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          14 GEEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             CceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            66778888888888888888888876664

>KOG2893|consensus

Probab=86.72  E-value=0.18  Score=45.74  Aligned_cols=41  Identities=27%  Similarity=0.577  Sum_probs=23.1

Q ss_pred             ccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHH
Q psy2973         399 CVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRH  446 (514)
Q Consensus       399 C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H  446 (514)
                      |.+|++-|.+..-|.+|++.       |-|+|.+|.+..-+.-.|..|
T Consensus        13 cwycnrefddekiliqhqka-------khfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA-------KHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeecccccchhhhhhhhhhh-------ccceeeeehhhhccCCCceee
Confidence            55555555555555555543       336666666655555555555

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=86.53  E-value=1.1  Score=36.57  Aligned_cols=27  Identities=15%  Similarity=0.545  Sum_probs=22.6

Q ss_pred             Ccccc----cccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKC----EKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C----~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      ..|.|    ..|++.+.+...|..|++.+||
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            34889    8899999999999999988775

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>TIGR00622 ssl1 transcription factor ssl1

Probab=86.14  E-value=1.2  Score=36.13  Aligned_cols=24  Identities=29%  Similarity=0.476  Sum_probs=12.4

Q ss_pred             cccCCcCCCcCCCHHHHHHHHHhc
Q psy2973         309 TSKCSVCDRLYKSDYLRRKHERSH  332 (514)
Q Consensus       309 ~~~C~~C~~~f~~~~~l~~H~~~h  332 (514)
                      .|.|+.|...|=-.-+.-.|...|
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ceeCCCCCCccccccchhhhhhcc
Confidence            455555555555544444444444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>smart00451 ZnF_U1 U1-like zinc finger

Probab=85.93  E-value=0.51  Score=29.41  Aligned_cols=21  Identities=24%  Similarity=0.542  Sum_probs=12.6

Q ss_pred             cccccccccccCHHHHHHhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVK  503 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~  503 (514)
                      |.|.+|+..|.+...+..|++
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             eEccccCCccCCHHHHHHHHC
Confidence            446666666666666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.23  E-value=1.9  Score=35.19  Aligned_cols=25  Identities=20%  Similarity=0.361  Sum_probs=21.6

Q ss_pred             cccc----cccccccCChhhHHHHhcccc
Q psy2973         458 DSSC----NECGKQYKWESFLQKHKKICT  482 (514)
Q Consensus       458 ~~~C----~~C~~~f~~~~~L~~H~~~h~  482 (514)
                      .|.|    ..|+..+.+...|..|.+.++
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~H  108 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEH  108 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhc
Confidence            4889    999999999999999987654

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=83.11  E-value=0.79  Score=28.35  Aligned_cols=10  Identities=40%  Similarity=1.049  Sum_probs=4.5

Q ss_pred             eecccccccc
Q psy2973         226 CKCEVCGKSF  235 (514)
Q Consensus       226 ~~C~~C~~~f  235 (514)
                      |.|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            3444454443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	514
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-17
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-12
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		9e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		8e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-08
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		3e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-05
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		3e-07
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		1e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-04
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-05
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-05
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		7e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		5e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-05
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 82/202 (40%), Gaps = 34/202 (16%)
Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRF 254
           K + C  C   F R   L +H +  H   KP KC  CGKSFS+   L  H  TH  +  +
Sbjct: 20  KPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPY 78
Query: 255 KCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV 314
           KCP CGK    +     H   H+G+  Y C  C KSF     L+ H   H+ E   KC  
Sbjct: 79  KCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE 138
Query: 315 CDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCND 374
           C + +  +     H+R+H+                                 E+P++C +
Sbjct: 139 CGKSFSREDNLHTHQRTHTG--------------------------------EKPYKCPE 166
Query: 375 CGSTFRLKRHLNSHINRLHKLK 396
           CG +F  +  LN H  R H  K
Sbjct: 167 CGKSFSRRDALNVH-QRTHTGK 187

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 14/180 (7%)
Query: 275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS 334
           +  G+  Y C  C KSF     L  H   H+ E   KC  C + +       +H+R+H+ 
Sbjct: 15  LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTG 74
Query: 335 --IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRL 392
              ++C  C K  S    +R H            E+P+ C +CG +F    HL +H  R 
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRTH------TGEKPYACPECGKSFSQLAHLRAH-QRT 127
Query: 393 H--KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH 450
           H  +    C  C   F+ +  L+ H  T H+G   K +KC +C   F     L  H + H
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTHQRT-HTG--EKPYKCPECGKSFSRRDALNVHQRTH 184

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 74/180 (41%), Gaps = 19/180 (10%)
Query: 336 FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH-- 393
           + C  C K  S    +  H            E+P++C +CG +F  K+ L  H  R H  
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTH------TGEKPYKCPECGKSFSDKKDLTRH-QRTHTG 74
Query: 394 KLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKN 453
           +    C  C   F+ +  L  H  T H+G   K + C +C   F    +L+ H + H   
Sbjct: 75  EKPYKCPECGKSFSQRANLRAHQRT-HTG--EKPYACPECGKSFSQLAHLRAHQRTHTGE 131
Query: 454 RNMLDSSCNECGKQYKWESFLQKHKKICTTT----CKSCGKRYSSIYVLRNHVKSCYGQQ 509
           +      C ECGK +  E  L  H++  T      C  CGK +S    L  H ++  G++
Sbjct: 132 KPY---KCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 39/81 (48%)
Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KC  CGKSFS +S L+ H  TH  +  +KCP CGK          H   H+G+  Y 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 284 CTYCEKSFLYKKSLKHHLFVH 304
           C  C KSF     L  H   H
Sbjct: 63  CPECGKSFSRSDHLSRHQRTH 83

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTT- 484
           K +KC +C   F  + NL++H + H   +      C ECGK +   S LQKH++  T   
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPY---KCPECGKSFSQSSDLQKHQRTHTGEK 59
Query: 485 ---CKSCGKRYSSIYVLRNHVKS 504
              C  CGK +S    L  H ++
Sbjct: 60  PYKCPECGKSFSRSDHLSRHQRT 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 38/81 (46%)
Query: 254 FKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS 313
           F C ICGK  +   T   H+ +HS    Y C YC K F  K  +K H F+H+ E   KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 314 VCDRLYKSDYLRRKHERSHSS 334
           VC + +        H R H+ 
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 264 RHKQTFDDHMNM-HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSD 322
           R K   DDH  +   G V Y C  C++S++   SL+ H  +HS E    C  C++++   
Sbjct: 4   RMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLA 63
Query: 323 YLRRKHERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGS 377
             R KHE  H+    +QC  C K   N Q +  H++++H+ D     + ++ + C S
Sbjct: 64  EYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRS 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 227 KCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMN---MHSGDVKYT 283
           +C  C K F +   LKVH+  H  +  F+CP CGK    K+   +H     M+  +  +T
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSH 332
           C+ C+++F  +  L+ H+  H+ E   KCS C +     ++++K  +SH
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQ----QFMQKKDLQSH 113

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Query: 277 SGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSH---- 332
           SG     C  C K FL K  LK H   H+ E   +C  C + Y       +HE  +    
Sbjct: 3   SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 333 -SSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINR 391
              +F C +C +       +R HM +         E P++C+ C   F  K+ L SH+ +
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVS------HTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Query: 392 LH 393
           LH
Sbjct: 117 LH 118

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 311 KCSVCDRLYKSDYLRRKHERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTER 368
           +C  C + + S Y  + H R H+    F+C  C K     + +   +E+   +  + +E+
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENL---LEHEARNCMNRSEQ 65
Query: 369 PFQCNDCGSTFRLKRHLNSH-INRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPN 424
            F C+ C  TFR +  L  H ++   ++   C  C   F  K+ L  H++  HSGP+
Sbjct: 66  VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 198 KCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCP 257
           KCEVC   F R+  LK H+   H  +KP KC+ C  + +++S+L  H   H+D+  FKC 
Sbjct: 10  KCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68
Query: 258 ICGKHIRHKQTFDDHMNMHSGD 279
           IC    R+      H+  H+GD
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGD 90

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 37/85 (43%)
Query: 249 ADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF 308
              G  KC +CGK    K     HM  H+G   Y C  C+ +     SL  HL +HS E 
Sbjct: 4   GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63
Query: 309 TSKCSVCDRLYKSDYLRRKHERSHS 333
             KC +C    ++      H RSH+
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRSHT 88

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 222 KLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVK 281
           KL PC+C   GKSF++ S    H + H     + C +CGK  + K     HM +H+G   
Sbjct: 9   KLYPCQC---GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Query: 282 YTCTYCEKSFLYKKSLKHHL 301
           Y C  C K F+++ S   H+
Sbjct: 66  YECNICAKRFMWRDSFHRHV 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 202 CPMKFHRQVSLKKHVEA----VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCP 257
           C   F    +++KH+      VH+      C  CGK+F  +S LK H   H  +  F+C 
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHV------CAECGKAFVESSKLKRHQLVHTGEKPFQCT 66
Query: 258 I--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHS 305
              CGK          H+ +H+GD  Y C +  C K F    +LK H+  H+
Sbjct: 67  FEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 228 CEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC 287
           C+ CG+ F+ +  L +H  TH D+  + C IC K  R +    DH  +HS +  + C  C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 288 EKSFLYKKSLKHHLFVH 304
            K F   ++L  H  +H
Sbjct: 80  GKGFCQSRTLAVHKTLH 96

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 254 FKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK 311
           + CP+  C +    K   D H+ +H+G   + C  C ++F  + SL  H+  H+ E    
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 312 CSVCDRLYKSDYLRRKHERSH 332
           C +C R + + + R +H + H
Sbjct: 65  CDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 367 ERPFQC--NDCGSTFRLKRHLNSHINRLH--KLKLNCVHCQAIFTNKQRLNYHILTKHSG 422
           ERP+ C    C   F  K +L++HI R+H  +    C  C   F+ +  LN HI T H+G
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHI-RIHTGQKPFQCRICMRNFSQQASLNAHIRT-HTG 59
Query: 423 PNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRN 455
              K + C+ C  +F T     RH K+H + ++
Sbjct: 60  E--KPFACDICGRKFATLHTRTRHTKIHLRQKD 90

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F ++ +L  H+  +H   KP +C +C ++FS ++ L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSQKTNLDTHIR-IHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDIC 68
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+      T D H  +H
Sbjct: 69  GRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 254 FKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK 311
           + CP+  C +    K   D H+ +H+G   + C  C ++F     L  H+  H+ E    
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 312 CSVCDRLYKSDYLRRKHERSH 332
           C +C R + + + R +H + H
Sbjct: 65  CDICGRKFATLHTRDRHTKIH 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 228 CEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDV--KYTCT 285
           CE+CGK F +   L  H  +H+ +  + CP+CG   + K     H+  H G V   Y C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 286 YCEKSFLYKKSLKHHL 301
            C K F     L  H+
Sbjct: 70  SCGKGFSRPDHLNGHI 85

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 331 SHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTF----RLKRHLN 386
           S SS   C IC KI  ++  + RH  +       + E+P+ C  CG  F    R+  H+ 
Sbjct: 3   SGSSGVACEICGKIFRDVYHLNRHKLS------HSGEKPYSCPVCGLRFKRKDRMSYHVR 56
Query: 387 SHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPN 424
           SH   + K  + C  C   F+    LN HI   HSGP+
Sbjct: 57  SHDGSVGKPYI-CQSCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSRSADLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 68
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+          H  +H
Sbjct: 69  GRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSRSAELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 68
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+          H  +H
Sbjct: 69  GRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 226 CKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT 285
           C  E C + FS++S L  H   H  Q  F+C IC ++         H+  H+G+  + C 
Sbjct: 7   CPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD 66
Query: 286 YCEKSFLYKKSLKHHLFVH 304
            C + F      K H  +H
Sbjct: 67  ICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 68
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+          H  +H
Sbjct: 69  GRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 9   ESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 67
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+          H  +H
Sbjct: 68  GRKFARSDERKRHTKIH 84

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F +  SL +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 68
Query: 260 GKHIRHKQTFDDHMNMH 276
           G+          H  +H
Sbjct: 69  GRKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 200 EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH  +  F C IC
Sbjct: 10  ESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDIC 68
Query: 260 GK 261
           G+
Sbjct: 69  GR 70

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 220 HLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD 279
           H +   C  E C + FS +  L  H   H  Q  F+C IC ++         H+  H+G+
Sbjct: 1   HERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 280 VKYTCTYCEKSFLYKKSLKHHLFVH 304
             + C  C + F      K H  +H
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 22/173 (12%)
Query: 315 CDRLYKSDYLRRKHERSHSS--IFQCR--ICDKILSNIQGIRRHMENMHNSDKDNTERPF 370
           C   Y  ++  + H   H+    F C+   C+K  +++  + RH      S     E+ F
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRH------SLTHTGEKNF 73
Query: 371 QCND--CGSTFRLKRHLNSHINRLHKLKLNCVH------CQAIFTNKQRLNYHILTKHSG 422
            C+   C   F  K ++  H NR H +K+ CV+      C   F    +L  H  +    
Sbjct: 74  TCDSDGCDLRFTTKANMKKHFNRFHNIKI-CVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 423 PNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQ 475
             Y+    E CD RF     LKRH KVH       D SC+  GK   W  +L+
Sbjct: 133 LPYECPH-EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKT--WTLYLK 182

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 191 HLKIKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           H   K ++C+   C  +F R   LK+H +  H  +KP +C+ C + FS +  LK H+ TH
Sbjct: 31  HTGEKPYQCDFKDCERRFSRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH 89
Query: 249 ADQGRFKC--PICGKHIRHKQTFDDHMNMH 276
             +  F C  P C K          H NMH
Sbjct: 90  TGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)
Query: 231 CGKSFSNNSTLKVHSTTHADQGRFK---------CPICGKHIRHKQTFDDHMNMHSGDVK 281
           C ++FS    L  H T     G  +         CP  GK  + K    +H+ +H+G+  
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 282 YTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSV--CDRLYKSDYLRRKHERSHSS 334
           + C +  C K F   ++LK H   H+ E   KC    CDR + +   R+KH   H+S
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 227 KCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSG 278
           KC+ CGKSFS++S L  H  TH  +  +KC  CGK    +     H  +H+G
Sbjct: 20  KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	514
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-18
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-08
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	7e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-07
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-06
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	9e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	7e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	7e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 82.1 bits (204), Expect = 2e-18
 Identities = 67/279 (24%), Positives = 92/279 (32%), Gaps = 98/279 (35%)

Query: 204 MKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHI 263
           +      S      A+    KP  C  CGKSFS +  L  H  TH  +  +KCP CGK  
Sbjct: 1   ISEFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF 59

Query: 264 RHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDY 323
             K+    H   H+G+  Y C  C KSF  + +L                          
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANL-------------------------- 93

Query: 324 LRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
             R H+R+H+                                 E+P+ C +CG +F    
Sbjct: 94  --RAHQRTHTG--------------------------------EKPYACPECGKSFSQLA 119

Query: 384 HLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNL 443
           HL +H                     QR        H+G   K +KC +C   F    NL
Sbjct: 120 HLRAH---------------------QRT-------HTGE--KPYKCPECGKSFSREDNL 149

Query: 444 KRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKI 480
             H + H  EK        C ECGK +     L  H++ 
Sbjct: 150 HTHQRTHTGEK-----PYKCPECGKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 77.5 bits (192), Expect = 8e-17
 Identities = 53/169 (31%), Positives = 73/169 (43%), Gaps = 2/169 (1%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  + C  C   F +     +H    H   K +KC  C   F  +  L +H +  H   
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDLTRH-QRTHTGE 75

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP KC  CGKSFS  + L+ H  TH  +  + CP CGK          H   H+G+  Y 
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYK 135

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSH 332
           C  C KSF  + +L  H   H+ E   KC  C + +        H+R+H
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 70.9 bits (175), Expect = 2e-14
 Identities = 59/274 (21%), Positives = 89/274 (32%), Gaps = 101/274 (36%)

Query: 234 SFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLY 293
           S   +S+    +     +  + CP CGK         +H   H+G+  Y C  C KSF  
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61

Query: 294 KKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRR 353
           KK L                             +H+R+H+                    
Sbjct: 62  KKDL----------------------------TRHQRTHTG------------------- 74

Query: 354 HMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLN 413
                        E+P++C +CG +F  + +L +H                     QR  
Sbjct: 75  -------------EKPYKCPECGKSFSQRANLRAH---------------------QRT- 99

Query: 414 YHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWE 471
                 H+G   K + C +C   F    +L+ H + H  EK        C ECGK +  E
Sbjct: 100 ------HTGE--KPYACPECGKSFSQLAHLRAHQRTHTGEK-----PYKCPECGKSFSRE 146

Query: 472 SFLQKHKKICTT----TCKSCGKRYSSIYVLRNH 501
             L  H++  T      C  CGK +S    L  H
Sbjct: 147 DNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 56.3 bits (137), Expect = 2e-09
 Identities = 41/115 (35%), Positives = 51/115 (44%), Gaps = 2/115 (1%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
           GE  +KC  C   F QR   R H    H   K + C  C   F +   L+ H +  H   
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAH-QRTHTGE 131

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSG 278
           KP KC  CGKSFS    L  H  TH  +  +KCP CGK    +   + H   H+G
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 38/173 (21%), Positives = 60/173 (34%), Gaps = 63/173 (36%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM---NMHSGDV 280
              +C  C K F +   LKVH+  H  +  F+CP CGK    K+   +H     M+  + 
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQ 65

Query: 281 KYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRI 340
            +TC+ C+++F  +  L                            R H  SH+       
Sbjct: 66  VFTCSVCQETFRRRMEL----------------------------RLHMVSHTG------ 91

Query: 341 CDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLH 393
                                     E P++C+ C   F  K+ L SH+ +LH
Sbjct: 92  --------------------------EMPYKCSSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.4 bits (176), Expect = 3e-15
 Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVH---STTHADQ 251
              +C  C  KF  +  LK H    H   KP +C  CGK +     L  H   +  +  +
Sbjct: 6   SGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

Query: 252 GRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSL-KHHLFVHSSE 307
             F C +C +  R +     HM  H+G++ Y C+ C + F+ KK L  H + +HS  
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 58.3 bits (142), Expect = 1e-10
 Identities = 28/123 (22%), Positives = 41/123 (33%), Gaps = 22/123 (17%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLH------KLKLNCVHCQAIFTNKQRLNYH--ILT 418
               +C  C   F  K +L  H NR H      +    C  C   +  K+ L  H     
Sbjct: 5   SSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFE----CPKCGKCYFRKENLLEHEARNC 59

Query: 419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQK 476
            +     + + C  C   F     L+ HM  H  E         C+ C +Q+  +  LQ 
Sbjct: 60  MNRSE--QVFTCSVCQETFRRRMELRLHMVSHTGEM-----PYKCSSCSQQFMQKKDLQS 112

Query: 477 HKK 479
           H  
Sbjct: 113 HMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.3 bits (111), Expect = 1e-06
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKH--VNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHL 221
           GE  F+C  C   + ++    +H   N ++   + F C VC   F R++ L+ H    H 
Sbjct: 32  GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH-MVSHT 90

Query: 222 KLKPCKCEVCGKSFSNNSTLKVH 244
              P KC  C + F     L+ H
Sbjct: 91  GEMPYKCSSCSQQFMQKKDLQSH 113

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.4 bits (168), Expect = 6e-14
 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 14/153 (9%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEA--VHLKLKPCKCEVCG-----KSFSNNSTLKVHSTT 247
              + + C  +F  Q  L  H+ +  +H + K   C   G     + F     L VH   
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 248 HADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSL-KHHLF 302
           H  +   KC    C K     +    H+  H+G+  Y C +  C K+F       KH   
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 303 VHSSE--FTSKCSVCDRLYKSDYLRRKHERSHS 333
            HS+E  +  K   C + Y      RKH ++  
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 65.3 bits (160), Expect = 6e-13
 Identities = 37/182 (20%), Positives = 61/182 (33%), Gaps = 42/182 (23%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTT---HADQGRFKCPICGKHIRHKQ-----TFDDHMNM 275
             C+ + C + F +   L  H  +   H ++  F C   G     +          HM  
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 276 HSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS 333
           H+G+  + CT+  C KS+   ++LK HL  H+ E    C                     
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG----------------- 104

Query: 334 SIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCN--DCGSTFRLKRHLNSHINR 391
                  C K  SN     +H    H+++K     P+ C    C   +     L  H+ +
Sbjct: 105 -------CSKAFSNASDRAKHQNRTHSNEK-----PYVCKLPGCTKRYTDPSSLRKHV-K 151

Query: 392 LH 393
             
Sbjct: 152 TV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 43/159 (27%), Positives = 57/159 (35%), Gaps = 30/159 (18%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHK---------LKLNCVHCQAIFTNKQRLNYHIL 417
           E   + + C   F  +  L  HIN  H              C      F  +  L  H+ 
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 418 TKHSGPNYKAWKC--EKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNE--CGKQYKWE 471
             H+G   K  KC  E C   +   +NLK H++ H  EK        C    C K +   
Sbjct: 61  R-HTGE--KPHKCTFEGCRKSYSRLENLKTHLRSHTGEK-----PYMCEHEGCSKAFSNA 112

Query: 472 SFLQKHKKICTT-----TCKS--CGKRYSSIYVLRNHVK 503
           S   KH+    +      CK   C KRY+    LR HVK
Sbjct: 113 SDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 14/127 (11%)

Query: 164 GENKFKCQFCPMW-----FEQRGKRRKHVNGVHLKIKRFKC--EVCPMKFHRQVSLKKHV 216
              +F C +         F+ +     H+   H   K  KC  E C   + R  +LK H+
Sbjct: 31  ERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHL 89

Query: 217 EAVHLKLKPCKCE--VCGKSFSNNSTLKVHST-THADQGRFKCPI--CGKHIRHKQTFDD 271
              H   KP  CE   C K+FSN S    H   TH+++  + C +  C K      +   
Sbjct: 90  R-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

Query: 272 HMNMHSG 278
           H+    G
Sbjct: 149 HVKTVHG 155

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 66.7 bits (164), Expect = 7e-14
 Identities = 26/90 (28%), Positives = 42/90 (46%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           K   C+ CG+ F+ +  L +H  TH D+  + C IC K  R +    DH  +HS +  + 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFK 75

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCS 313
           C  C K F   ++L  H  +H    +   +
Sbjct: 76  CQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 50.9 bits (123), Expect = 3e-08
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 2/93 (2%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL 223
            + +F C+FC   F +      H    H   + + C++C   F RQ  L+ H   +H K 
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKE 71

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           KP KC+ CGK F  + TL VH T H        
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 25/116 (21%), Positives = 38/116 (32%), Gaps = 37/116 (31%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
           ++ F C  CG  F    +L  H                     +R        H+    +
Sbjct: 15  KKEFICKFCGRHFTKSYNLLIH---------------------ERT-------HTDE--R 44

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKI 480
            + C+ C   F    +L+ H  +H  EK        C ECGK +     L  HK +
Sbjct: 45  PYTCDICHKAFRRQDHLRDHRYIHSKEK-----PFKCQECGKGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT 483
           K + C+ C   F  + NL  H + H  E+       +C+ C K ++ +  L+ H+ I + 
Sbjct: 16  KEFICKFCGRHFTKSYNLLIHERTHTDER-----PYTCDICHKAFRRQDHLRDHRYIHSK 70

Query: 484 ----TCKSCGKRYSSIYVLRNH 501
                C+ CGK +     L  H
Sbjct: 71  EKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 41.3 bits (98), Expect = 6e-05
 Identities = 27/123 (21%), Positives = 41/123 (33%), Gaps = 35/123 (28%)

Query: 272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYLRRKHER 330
                    ++ C +C + F    +L  H   H+ E    C +C + + + D+L R H  
Sbjct: 8   GRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL-RDHRY 66

Query: 331 SHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHIN 390
            HS                                 E+PF+C +CG  F   R L  H  
Sbjct: 67  IHSK--------------------------------EKPFKCQECGKGFCQSRTLAVH-K 93

Query: 391 RLH 393
            LH
Sbjct: 94  TLH 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.3 bits (163), Expect = 8e-14
 Identities = 26/89 (29%), Positives = 36/89 (40%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
            P KCEVCGK FS    LK H   H     +KC  C        + + H+ +HS +  + 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKC 312
           C  C  +      L  HL  H+ +     
Sbjct: 67  CQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 63.6 bits (156), Expect = 6e-13
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 189 GVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           G        KCEVC   F R+  LK H    H  +KP KC+ C  + +++S+L  H   H
Sbjct: 1   GSSGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59

Query: 249 ADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC 284
           +D+  FKC IC    R+      H+  H+GD   + 
Sbjct: 60  SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.5 bits (122), Expect = 3e-08
 Identities = 26/118 (22%), Positives = 40/118 (33%), Gaps = 37/118 (31%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
             P +C  CG  F  K  L +H                      R        H+G   K
Sbjct: 6   SGPHKCEVCGKCFSRKDKLKTH---------------------MRC-------HTGV--K 35

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICT 482
            +KC+ CD     + +L +H+++H  E+        C  C    +  S L  H +  T
Sbjct: 36  PYKCKTCDYAAADSSSLNKHLRIHSDERPFK-----CQICPYASRNSSQLTVHLRSHT 88

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 47.4 bits (114), Expect = 4e-07
 Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 11/82 (13%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT 483
              KCE C   F     LK HM+ H   K        C  C       S L KH +I + 
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVK-----PYKCKTCDYAAADSSSLNKHLRIHSD 61

Query: 484 ----TCKSCGKRYSSIYVLRNH 501
                C+ C     +   L  H
Sbjct: 62  ERPFKCQICPYASRNSSQLTVH 83

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 67.7 bits (166), Expect = 1e-13
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFK---------CPICGKHIRHKQTF 269
           +         + C ++FS    L  H T     G  +         CP  GK  + K   
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 270 DDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSV--CDRLYKSDYLR 325
            +H+ +H+G+  + C +  C K F   ++LK H   H+ E   KC    CDR + +   R
Sbjct: 79  VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR 138

Query: 326 RKHERSHSS 334
           +KH   H+S
Sbjct: 139 KKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 32/136 (23%), Positives = 47/136 (34%), Gaps = 12/136 (8%)

Query: 190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVH--------LKLKPCKCEVCGKSFSNNSTL 241
           +         + C   F     L  HV   H              +C   GKSF     L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 242 KVHSTTHADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSL 297
             H   H  +  F CP   CGK     +    H   H+G+  + C +  C++ F      
Sbjct: 79  VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDR 138

Query: 298 KHHLFVHSSEFTSKCS 313
           K H+ VH+S+ +   S
Sbjct: 139 KKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 32/158 (20%), Positives = 52/158 (32%), Gaps = 21/158 (13%)

Query: 231 CGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT------- 283
            G S                Q       C +          H+ M               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 284 --CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV--CDRLYKSDYLRRKHERSHSSI--FQ 337
             C    KSF  K  L +H+ VH+ E    C    C +++      + H+R+H+    F+
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 338 CRI--CDKILSNIQGIRRHMENMHNSDKDNTERPFQCN 373
           C    CD+  +N    ++HM ++H SDK         +
Sbjct: 123 CEFEGCDRRFANSSDRKKHM-HVHTSDK-----SGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 30/131 (22%), Positives = 44/131 (33%), Gaps = 20/131 (15%)

Query: 364 DNTERPFQCNDCGSTFRLKRHLNSHINRLH----------KLKLNCVHCQAIFTNKQRLN 413
           D  +       C  TF     L +H+   H               C      F  K +L 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 414 YHILTKHSGPNYKAWKC--EKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYK 469
            HI   H+G   K + C    C   F  ++NLK H + H  EK           C +++ 
Sbjct: 80  NHIRV-HTGE--KPFPCPFPGCGKIFARSENLKIHKRTHTGEKP---FKCEFEGCDRRFA 133

Query: 470 WESFLQKHKKI 480
             S  +KH  +
Sbjct: 134 NSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 12/108 (11%)

Query: 406 FTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH------EKNRNMLDS 459
            ++ Q +   +  K       +   + CD  F T   L  H+ +       + N      
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 460 SCNECGKQYKWESFLQKHKKICT----TTCKS--CGKRYSSIYVLRNH 501
            C   GK +K +  L  H ++ T      C    CGK ++    L+ H
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 28/106 (26%), Positives = 36/106 (33%), Gaps = 15/106 (14%)

Query: 164 GENKFKCQFCPMW---------FEQRGKRRKHVNGVHLKIKRFKCEV--CPMKFHRQVSL 212
                +      W         F+ + K   H+  VH   K F C    C   F R  +L
Sbjct: 50  VGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENL 108

Query: 213 KKHVEAVHLKLKPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKC 256
           K H    H   KP KCE   C + F+N+S  K H   H        
Sbjct: 109 KIHKR-THTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 13/124 (10%)

Query: 336 FQCRICDKILSNIQGIRRHMENMH---NSDKDNTERPFQCNDCGSTFRLKRHLNSHINRL 392
              + CD+  S +  +  H+   H       ++     +C   G +F+ K  L +HI R+
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI-RV 84

Query: 393 HK----LKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKC--EKCDMRFVTNKNLKRH 446
           H            C  IF   + L  H  T H+G   K +KC  E CD RF  + + K+H
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRT-HTGE--KPFKCEFEGCDRRFANSSDRKKH 141

Query: 447 MKVH 450
           M VH
Sbjct: 142 MHVH 145

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVK-- 281
               CE+CGK F +   L  H  +H+ +  + CP+CG   + K     H+  H G V   
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65

Query: 282 YTCTYCEKSFLYKKSLKHHL 301
           Y C  C K F     L  H+
Sbjct: 66  YICQSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGR- 253
               CE+C   F     L +H +  H   KP  C VCG  F     +  H  +H      
Sbjct: 6   SGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 254 -FKCPICGKHIRHKQTFDDHMNM-HSG 278
            + C  CGK        + H+   HSG
Sbjct: 65  PYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 48.6 bits (117), Expect = 1e-07
 Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT 483
               CE C   F    +L RH   H  EK       SC  CG ++K +  +  H +    
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKLSHSGEK-----PYSCPVCGLRFKRKDRMSYHVRSHDG 60

Query: 484 ------TCKSCGKRYSSIYVLRNHVK 503
                  C+SCGK +S    L  H+K
Sbjct: 61  SVGKPYICQSCGKGFSRPDHLNGHIK 86

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.8 bits (159), Expect = 3e-13
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 4/103 (3%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRF 254
           K + C+ C   F  +    +H  ++HL L+P  C VCGK F     L  H   H     +
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY 66

Query: 255 KCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSL 297
           +C IC K    + +F  H ++ S    Y     E++       
Sbjct: 67  ECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 57.5 bits (140), Expect = 2e-10
 Identities = 28/164 (17%), Positives = 42/164 (25%), Gaps = 63/164 (38%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           K   C+ CGKSF++ S    H + H     + C +CGK  + K     HM +H+G   Y 
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYE 67

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDK 343
           C  C K            F+    F                   H    S          
Sbjct: 68  CNICAKR-----------FMWRDSF-------------------HRHVTSC--------- 88

Query: 344 ILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNS 387
                                   + ++              +S
Sbjct: 89  -----------------------TKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 44/133 (33%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
           ++ + C  CG +F  K   + H                       +       H G   +
Sbjct: 8   DKLYPC-QCGKSFTHKSQRDRH---------------------MSM-------HLGL--R 36

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT- 483
            + C  C  +F    +L  HMK+H   K        CN C K++ W      H+ + +  
Sbjct: 37  PYGCGVCGKKFKMKHHLVGHMKIHTGIK-----PYECNICAKRFMWRDSF--HRHVTSCT 89

Query: 484 ---TCKSCGKRYS 493
                    +  +
Sbjct: 90  KSYEAAKAEQNTT 102

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 62.4 bits (152), Expect = 1e-12
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQG---RFKCPICGKHIRHKQTFDDHMNMHSGDV 280
              +CE+CG +    ++L  H   HA+     RF C  CGK      +   H +     +
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 281 KYTC 284
               
Sbjct: 66  LLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.6 bits (124), Expect = 8e-09
 Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVE--AVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQG 252
              +CE+C     ++ SL  H    A  +      CE CGK F    ++  H +      
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 253 RFKCPICGK 261
                    
Sbjct: 66  LLAPQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.9 bits (117), Expect = 6e-08
 Identities = 18/84 (21%), Positives = 22/84 (26%), Gaps = 27/84 (32%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
               QC  CG T R K  LN H  R H                         +       
Sbjct: 5   SSGLQCEICGFTCRQKASLNWHQ-RKH------------------------AETVA--AL 37

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVH 450
            + CE C  RF    ++  H    
Sbjct: 38  RFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.9 bits (117), Expect = 7e-08
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKI---KRFKCEVCPMKFHRQVSLKKHVEAVH 220
           G +  +C+ C     Q+     H    H +     RF CE C  +F +  S+  H    H
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 221 LKLKPCKCEVCGKSF 235
             L     E  G S 
Sbjct: 63  PALLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 429 KCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----- 483
           +CE C        +L  H + H +    L   C  CGK+++    +  H+          
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

Query: 484 TCKSCGK 490
             +S G 
Sbjct: 69  PQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.8 bits (101), Expect = 8e-06
 Identities = 14/64 (21%), Positives = 19/64 (29%), Gaps = 3/64 (4%)

Query: 336 FQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHKL 395
            QC IC         +  H    H          F C  CG  F     + +H ++ H  
Sbjct: 8   LQCEICGFTCRQKASLNWHQ-RKHAETV--AALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 396 KLNC 399
            L  
Sbjct: 65  LLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 15/61 (24%), Positives = 19/61 (31%), Gaps = 5/61 (8%)

Query: 276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK---CSVCD-RLYKSDYLRRKHERS 331
            SG     C  C  +   K SL  H   H+    +    C  C  R  K D +   H   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAA-HRSK 60

Query: 332 H 332
            
Sbjct: 61  S 61

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 45/212 (21%), Positives = 71/212 (33%), Gaps = 45/212 (21%)

Query: 195 KRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCE--VCGKSFSNNSTLKVHSTTHAD 250
           KR+ C    C   +++   L+ H    H   KP  C+   C K F++   L  HS TH  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAH-LCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG 69

Query: 251 QGRFKC--PICGKHIRHKQTFDDHMNMHSG--DVKYTCTY--CEKSFLYKKSLKHHLFVH 304
           +  F C    C      K     H N         Y C +  C K+F     LK H F H
Sbjct: 70  EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH 129

Query: 305 SSEFTSKCS--VCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSD 362
           + +   +C    CD+ +      ++HE+ H+                             
Sbjct: 130 TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---------------------------- 161

Query: 363 KDNTERPFQCNDCGSTFRLKRHLNSHINRLHK 394
               ++   C+  G T+        H+   H+
Sbjct: 162 -YPCKKDDSCSFVGKTW---TLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 48/228 (21%), Positives = 79/228 (34%), Gaps = 61/228 (26%)

Query: 272 HMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCS--VCDRLYKSDYLRRK 327
              +     +Y C++  C  ++     L+ HL  H+ E    C    C++ + S +   +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 328 HERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCND--CGSTFRLKRHL 385
           H  +H+                                 E+ F C+   C   F  K ++
Sbjct: 63  HSLTHTG--------------------------------EKNFTCDSDGCDLRFTTKANM 90

Query: 386 NSHINRLHKLKL-----NCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKC--EKCDMRFV 438
             H NR H +K+     +  +C   F    +L  H  + H+      ++C  E CD RF 
Sbjct: 91  KKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS-HTQQ--LPYECPHEGCDKRFS 147

Query: 439 TNKNLKRHMKVH-----EKNRNMLDSSCNECGKQYKWESFLQKHKKIC 481
               LKRH KVH     +K         + C    K  +   KH   C
Sbjct: 148 LPSRLKRHEKVHAGYPCKK--------DDSCSFVGKTWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 25/153 (16%)

Query: 367 ERPFQCN--DCGSTFRLKRHLNSHINRLHK----LKLNCVHCQAIFTNKQRLNYHILTKH 420
            + + C+  DCG+ +     L +H+   H            C+  FT+   L  H LT H
Sbjct: 10  YKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT-H 67

Query: 421 SGPNYKAWKCE--KCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCN--ECGKQYKWESFL 474
           +G   K + C+   CD+RF T  N+K+H       K        C+   CGK +K  + L
Sbjct: 68  TGE--KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVY---VCHFENCGKAFKKHNQL 122

Query: 475 QKHKKICTT----TCK--SCGKRYSSIYVLRNH 501
           + H+   T      C    C KR+S    L+ H
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 12/87 (13%)

Query: 193 KIKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKC--EVCGKSFSNNSTLKVHSTTH 248
           KI  + C    C   F +   LK H +  H +  P +C  E C K FS  S LK H   H
Sbjct: 101 KICVYVCHFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 249 ADQGRFKCPICGK-------HIRHKQT 268
           A     K   C         +++H   
Sbjct: 160 AGYPCKKDDSCSFVGKTWTLYLKHVAE 186

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 63.3 bits (155), Expect = 2e-12
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 16/123 (13%)

Query: 195 KRFKC--EVCPMKFHRQVSLKKHV----EAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           +   C  + C   F    +++KH+           +   C  CGK+F  +S LK H   H
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTHGP------RVHVCAECGKAFVESSKLKRHQLVH 57

Query: 249 ADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVH 304
             +  F+C    CGK          H+ +H+GD  Y C +  C K F    +LK H+  H
Sbjct: 58  TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

Query: 305 SSE 307
           +  
Sbjct: 118 AKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 14/121 (11%)

Query: 367 ERPFQC--NDCGSTFRLKRHLNSHINRLHKLKL-NCVHCQAIFTNKQRLNYHILTKHSGP 423
            R   C    C   FR    +  H+   H  ++  C  C   F    +L  H L  H+G 
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECGKAFVESSKLKRHQLV-HTGE 60

Query: 424 NYKAWKC--EKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKK 479
             K ++C  E C  RF  + NL+ H+++H  ++         + C K++   + L+ H  
Sbjct: 61  --KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRP---YVCPFDGCNKKFAQSTNLKSHIL 115

Query: 480 I 480
            
Sbjct: 116 T 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 430 CEKCDMRFVTNKNLKRHMKVH-EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----- 483
            + C   F  N  +++H+  H  +        C ECGK +   S L++H+ + T      
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHGPR-----VHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64

Query: 484 -TCKSCGKRYSSIYVLRNH 501
            T + CGKR+S  + LR H
Sbjct: 65  CTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 39.0 bits (92), Expect = 5e-04
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 6/89 (6%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEV--CPMKFHRQVSLKKHVEAVHL 221
           G     C  C   F +  K ++H   VH   K F+C    C  +F    +L+ HV  +H 
Sbjct: 31  GPRVHVCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IHT 88

Query: 222 KLKP--CKCEVCGKSFSNNSTLKVHSTTH 248
             +P  C  + C K F+ ++ LK H  TH
Sbjct: 89  GDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 10/90 (11%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHK----LKLNCVHCQAIFTNKQRLNYHILTKHSG 422
            R   C +CG  F     L  H   +H      +     C   F+    L  H+   H+G
Sbjct: 32  PRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRI-HTG 89

Query: 423 PNYKAWKC--EKCDMRFVTNKNLKRHMKVH 450
              + + C  + C+ +F  + NLK H+  H
Sbjct: 90  D--RPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 61.7 bits (151), Expect = 2e-12
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 224 KP--CKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVK 281
           +P  C  E C + FS + +L  H   H  Q  F+C IC ++         H+  H+G+  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62

Query: 282 YTCTYCEKSFLYKKSLKHHLFVHSSE 307
           + C  C + F      K H  +H  +
Sbjct: 63  FACDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 39/118 (33%)

Query: 367 ERPFQC--NDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPN 424
           ERP+ C    C   F     L  H                      R+       H+G  
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRH---------------------IRI-------HTGQ- 32

Query: 425 YKAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKI 480
            K ++C  C   F  + +L  H++ H  EK       +C+ CG+++      ++H KI
Sbjct: 33  -KPFQCRICMRNFSRSDHLTTHIRTHTGEK-----PFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 426 KAWKC--EKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKIC 481
           + + C  E CD RF  + +L RH+++H  +K        C  C + +     L  H +  
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQK-----PFQCRICMRNFSRSDHLTTHIRTH 57

Query: 482 TT----TCKSCGKRYSSIYVLRNHVK 503
           T      C  CG++++     + H K
Sbjct: 58  TGEKPFACDICGRKFARSDERKRHTK 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 18/72 (25%), Positives = 24/72 (33%), Gaps = 4/72 (5%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGR----FKCPICGKHIRHKQTFDDHMNMHSGD 279
           KP  C  C K+F     L +H   + D       F C  CGK    + T   H +  +G 
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 280 VKYTCTYCEKSF 291
                     S 
Sbjct: 74  DGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 37/104 (35%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNY- 425
           E+P+ C+ C  TFR K+ L+ H                      +        +  PN+ 
Sbjct: 13  EKPYACSHCDKTFRQKQLLDMH---------------------FKR-------YHDPNFV 44

Query: 426 -KAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGK 466
             A+ C KC   F     + RH                    G 
Sbjct: 45  PAAFVCSKCGKTFTRRNTMARHADNCAGPD-----GVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 5/70 (7%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDS-SCNECGKQYKWESFLQKHKKICTT- 483
           K + C  CD  F   + L  H K +     +  +  C++CGK +   + + +H   C   
Sbjct: 14  KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

Query: 484 ---TCKSCGK 490
                ++ G 
Sbjct: 74  DGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.3 bits (90), Expect = 5e-04
 Identities = 16/113 (14%), Positives = 34/113 (30%), Gaps = 38/113 (33%)

Query: 272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTS----KCSVCDRLY-KSDYLRR 326
               H+G+  Y C++C+K+F  K+ L  H   +           CS C + + + + + R
Sbjct: 6   SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65

Query: 327 KHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTF 379
            H  + +                                     +  + G + 
Sbjct: 66  -HADNCAG--------------------------------PDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.9 bits (89), Expect = 7e-04
 Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 4/75 (5%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHV---NGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVH 220
           GE  + C  C   F Q+     H    +  +     F C  C   F R+ ++ +H     
Sbjct: 12  GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH-ADNC 70

Query: 221 LKLKPCKCEVCGKSF 235
                 + E  G S 
Sbjct: 71  AGPDGVEGENSGPSS 85

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.8 bits (146), Expect = 3e-11
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 224 KPCKCE--VCGKSFSNNSTLKVHSTTHADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGD 279
           +P  C    C K +   S L++HS  H  +  ++C    C +          H   H+G 
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 280 VKYTCTYCEKSFLYKKSLKHHLFVHSSE--FTSKCSVCDRLY-KSDYLRRKHERSH 332
             + C  C++ F     LK H   H+ E  F+ +   C + + +SD L R H   H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR-HHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 5/86 (5%)

Query: 195 KRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQG 252
           K ++C+   C  +F R   LK+H +  H  +KP +C+ C + FS +  LK H+ TH  + 
Sbjct: 35  KPYQCDFKDCERRFSRSDQLKRH-QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 253 RFKC--PICGKHIRHKQTFDDHMNMH 276
            F C  P C K          H NMH
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 51.4 bits (124), Expect = 3e-08
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 19/124 (15%)

Query: 367 ERPFQCN--DCGSTFRLKRHLNSHINRLHK----LKLNCVHCQAIFTNKQRLNYHILTKH 420
           +RPF C    C   +    HL  H  R H      + +   C+  F+   +L  H    H
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR-H 61

Query: 421 SGPNYKAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCN--ECGKQYKWESFLQK 476
           +G   K ++C+ C  +F  + +LK H + H  EK       SC    C K++     L +
Sbjct: 62  TGV--KPFQCKTCQRKFSRSDHLKTHTRTHTGEK-----PFSCRWPSCQKKFARSDELVR 114

Query: 477 HKKI 480
           H  +
Sbjct: 115 HHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 18/94 (19%)

Query: 367 ERPFQCN--DCGSTFRLKRHLNSHINRLH------KLKLNCVHCQAIFTNKQRLNYHILT 418
           E+P+QC+  DC   F     L  H  R H      +    C  CQ  F+    L  H  T
Sbjct: 34  EKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQ----CKTCQRKFSRSDHLKTHTRT 88

Query: 419 KHSGPNYKAWKCEK--CDMRFVTNKNLKRHMKVH 450
            H+G   K + C    C  +F  +  L RH  +H
Sbjct: 89  -HTGE--KPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 39.8 bits (94), Expect = 3e-04
 Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 426 KAWKCE--KCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCN--ECGKQYKWESFLQKHKK 479
           + + C    C+ R+    +L+ H + H  EK        C+  +C +++     L++H++
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKP-----YQCDFKDCERRFSRSDQLKRHQR 59

Query: 480 ICTT----TCKSCGKRYSSIYVLRNH 501
             T      CK+C +++S    L+ H
Sbjct: 60  RHTGVKPFQCKTCQRKFSRSDHLKTH 85

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 225 PCKCEVCGKSFSNNSTLKVHS-TTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVK 281
           PC    CG+ FSN   L  H    H  Q  F CP   CGK    K+   +HM +HS    
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 282 YTCTYCEKSF 291
           Y C +   S 
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 164 GENKFKCQF--CPMWFEQRGKRRKHVNGVHLKIKRFKCE--VCPMKFHRQVSLKKHVEAV 219
           G +   C F  C   F  R     H    H+  K F C    C   F+ +  LK+H   +
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKL 62

Query: 220 HLKLKPCKCEVCGKSF 235
           H   +   CE  G S 
Sbjct: 63  HSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 40/106 (37%)

Query: 367 ERPFQCN--DCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPN 424
                C+   CG  F  +++LN H                     ++       +H    
Sbjct: 5   SSGMPCDFPGCGRIFSNRQYLNHH---------------------KKY------QHIHQ- 36

Query: 425 YKAWKCE--KCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGK 466
            K++ C    C   F   K+LK HMK+H   +     D  C   G 
Sbjct: 37  -KSFSCPEPACGKSFNFKKHLKEHMKLHSDTR-----DYICEFSGP 76

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.7 bits (138), Expect = 1e-10
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 5/88 (5%)

Query: 194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGR 253
           +K F+C +C   F R   L  H+   H   KP  C++CG+ F+ +   K H         
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHIL-P 58

Query: 254 FKCPICGK---HIRHKQTFDDHMNMHSG 278
                  +      H +     +    G
Sbjct: 59  ILEDKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.3 bits (124), Expect = 1e-08
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 429 KCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICT---T 483
           +C  C   F  + +L  H++ H  EK       +C+ CG+++      ++H+ I      
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEK-----PFACDICGRKFARSDERKRHRDIQHILPI 59

Query: 484 TCKSCGKRYSSIYVLRNHVK 503
                 +  S  Y L N V 
Sbjct: 60  LEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 36/113 (31%)

Query: 368 RPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKA 427
           +PFQC  C   F    HL +H                      R        H+G   K 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTH---------------------IRT-------HTGE--KP 31

Query: 428 WKCEKCDMRFVTNKNLKRHMKVH-EKNRNMLDSSCNECGKQYKWESFLQKHKK 479
           + C+ C  +F  +   KRH  +             ++  +       L+    
Sbjct: 32  FACDICGRKFARSDERKRHRDIQHILP-----ILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 38/116 (32%)

Query: 223 LKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKY 282
           +KP +C +C ++FS +  L  H                            +  H+G+  +
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTH----------------------------IRTHTGEKPF 32

Query: 283 TCTYCEKSFLYKKSLKHHLFVHSSEFTSK---CSVCDRLY-KSDYLRR--KHERSH 332
            C  C + F      K H  +               + L  K+ +L       +  
Sbjct: 33  ACDICGRKFARSDERKRHRDIQ----HILPILEDKVEELLSKNYHLENEVARLKKL 84

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 211 SLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGR--FKCPICGKHIRHKQT 268
           S        H   KP +C +C   F+ + T+K+H      +    F CP C   I  K  
Sbjct: 2   SSGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 269 FDDHM-NMHSGDVKYT 283
              H+   HS     +
Sbjct: 61  LGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 399 CVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMK 448
           C  C A FT    +  HIL      N   + C  CD       +L  H++
Sbjct: 18  CYICHARFTQSGTMKMHILQ-KHTENVAKFHCPHCDTVIARKSDLGVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 326 RKHERSHS--SIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKR 383
               R+HS    ++C IC    +    ++ H+    +++       F C  C +    K 
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTEN---VAKFHCPHCDTVIARKS 59

Query: 384 HLNSHINRLH 393
            L  H+ + H
Sbjct: 60  DLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 24/92 (26%)

Query: 272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERS 331
               HSG+  Y C  C   F    ++K H+    +E  +K                    
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAK-------------------- 45

Query: 332 HSSIFQCRICDKILSNIQGIRRHMENMHNSDK 363
               F C  CD +++    +  H+   H+   
Sbjct: 46  ----FHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 13/70 (18%)

Query: 442 NLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT------TCKSCGKRYS 493
           +     + H  EK        C  C  ++     ++ H     T       C  C    +
Sbjct: 2   SSGSSGRTHSGEK-----PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIA 56

Query: 494 SIYVLRNHVK 503
               L  H++
Sbjct: 57  RKSDLGVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGVHL--KIKRFKCEVCPMKFHRQVSLKKHVEAVHL 221
           GE  ++C  C   F Q G  + H+        + +F C  C     R+  L  H+   H 
Sbjct: 12  GEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS 70

Query: 222 KLKP 225
              P
Sbjct: 71  YSGP 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 52.8 bits (128), Expect = 3e-09
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)

Query: 197 FKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           F C++C   F R  +L  H   +H   +P  C+ CGK F   S +K H+  H  +   KC
Sbjct: 2   FDCKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 257 PICGKHIRHKQTFDDHMNMHSG 278
            +CGK          H   H+G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.9 bits (110), Expect = 9e-07
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 5/63 (7%)

Query: 190 VHLKI----KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHS 245
            HL I    + + C+ C  +FH++  +KKH   +H   KP KC+VCGK+FS +S L  HS
Sbjct: 19  THLLIHSDTRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKCQVCGKAFSQSSNLITHS 77

Query: 246 TTH 248
             H
Sbjct: 78  RKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 37/115 (32%)

Query: 370 FQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWK 429
           F C  CG +F+    L++H                       +       HS    + + 
Sbjct: 2   FDCKICGKSFKRSSTLSTH---------------------LLI-------HSDT--RPYP 31

Query: 430 CEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICT 482
           C+ C  RF    ++K+H  +H  EK        C  CGK +   S L  H +  T
Sbjct: 32  CQYCGKRFHQKSDMKKHTFIHTGEKPHK-----CQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.8 bits (102), Expect = 9e-06
 Identities = 29/79 (36%), Positives = 37/79 (46%)

Query: 254 FKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS 313
           F C ICGK  +   T   H+ +HS    Y C YC K F  K  +K H F+H+ E   KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 314 VCDRLYKSDYLRRKHERSH 332
           VC + +        H R H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.0 bits (100), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 429 KCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT--- 483
            C+ C   F  +  L  H+ +H   +        C  CGK++  +S ++KH  I T    
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTR-----PYPCQYCGKRFHQKSDMKKHTFIHTGEKP 57

Query: 484 -TCKSCGKRYSSIYVLRNH 501
             C+ CGK +S    L  H
Sbjct: 58  HKCQVCGKAFSQSSNLITH 76

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 50.3 bits (121), Expect = 1e-08
 Identities = 14/50 (28%), Positives = 21/50 (42%)

Query: 188 NGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSN 237
                  K + C+ C   F R   L  H++ VH   +P KC+V     S+
Sbjct: 4   GSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 218 AVHLKLKPCKCEVCGKSFSNNSTLKVHS-TTHADQGRFKCPICGK 261
           +     KP  C+ CGK FS    L  H    H  +   KC +   
Sbjct: 5   SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLH 393
            +P+ C  CG  F    HLN HI ++H
Sbjct: 10  GKPYICQSCGKGFSRPDHLNGHIKQVH 36

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.5 bits (122), Expect = 1e-08
 Identities = 19/55 (34%), Positives = 24/55 (43%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSG 278
           KP KC+ C  SF     L  H T H  +  ++C ICG           H  +HSG
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 20/69 (28%), Positives = 27/69 (39%)

Query: 239 STLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLK 298
                HS        +KC  C    R+K     H  +H+G+  Y C  C   F    +LK
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 299 HHLFVHSSE 307
            H  +HS E
Sbjct: 63  THTRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.5 bits (96), Expect = 5e-05
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 7/59 (11%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICT 482
           K +KC++C   F    NL  H  VH  EK        CN CG Q+   + L+ H +I +
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEK-----PYRCNICGAQFNRPANLKTHTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.4 bits (93), Expect = 1e-04
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 11/66 (16%)

Query: 442 NLKRHMKVH--EKNRNMLDSSCNECGKQYKWESFLQKHKKICTT----TCKSCGKRYSSI 495
           +   H  +   +K        C+ C   ++++  L  HK + T      C  CG +++  
Sbjct: 4   HHHHHSHMTHSDKPYK-----CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58

Query: 496 YVLRNH 501
             L+ H
Sbjct: 59  ANLKTH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.3 bits (116), Expect = 8e-08
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHV-EAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
             ++C+VC   +    +  +H   +    +K   C  C K F+    +  H    
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGR--FKCPICGKHIRHKQTFDDHMNMHSG 278
              +C+VC + +++ S    H  T   +    + CP C K    K     H+ +   
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 329 ERSHSS--IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLN 386
           E +      ++C++C ++ ++I    RH    H  +     + + C  C   F  K ++ 
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN----VKVYPCPFCFKEFTRKDNMT 57

Query: 387 SHINRLHKL 395
           +H+  +HK+
Sbjct: 58  AHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.2 bits (95), Expect = 5e-05
 Identities = 13/86 (15%), Positives = 23/86 (26%), Gaps = 28/86 (32%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
           E  ++C  C   +    +   H                        ++         N K
Sbjct: 8   EHTYRCKVCSRVYTHISNFCRH---------------------YVTSHK-------RNVK 39

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVHEK 452
            + C  C   F    N+  H+K+  K
Sbjct: 40  VYPCPFCFKEFTRKDNMTAHVKIIHK 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 13/60 (21%), Positives = 19/60 (31%)

Query: 254 FKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS 313
            KC  C      K     H  +H  D  + C YC        +L  H+     + +   S
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 1/54 (1%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
              KC  C      + +L+ H E +H   +P KC  C       S L  H    
Sbjct: 8   HPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 38.2 bits (90), Expect = 3e-04
 Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 30/84 (35%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYK 426
             P +C++C  +   K  L  H                     +R        H     +
Sbjct: 7   GHPEKCSECSYSCSSKAALRIH---------------------ER-------IHCTD--R 36

Query: 427 AWKCEKCDMRFVTNKNLKRHMKVH 450
            +KC  C        NL +HMK  
Sbjct: 37  PFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.1 bits (87), Expect = 9e-04
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query: 276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSH 332
            S      C+ C  S   K +L+ H  +H ++   KC+ C    K      KH +  
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 7/88 (7%)

Query: 191 HLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKP--CKCEVCGKSFSNNSTLKVHSTTH 248
                      C   + +   LK H    H   KP  C  + CG  F+ +  L  H   H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 249 ADQGRFKCPICGKHIRHKQTFDDHMNMH 276
                F+C  C +         DH+ +H
Sbjct: 61  TGHRPFQCQKCDRAFSRS----DHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 26/116 (22%), Positives = 40/116 (34%), Gaps = 32/116 (27%)

Query: 220 HLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD 279
                 C    CGK+++ +S LK H                            +  H+G+
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAH----------------------------LRTHTGE 33

Query: 280 VKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY-KSDYLRRKHERSH 332
             Y C +  C   F     L  H   H+     +C  CDR + +SD+L   H + H
Sbjct: 34  KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHL-ALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 26/116 (22%), Positives = 33/116 (28%), Gaps = 36/116 (31%)

Query: 276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCD---RLYKSDYLRRKHERSH 332
            +         C K++     LK HL  H+ E    C       +  +SD L R H R H
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTR-HYRKH 60

Query: 333 SSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSH 388
           +                                  RPFQC  C   F    HL  H
Sbjct: 61  TG--------------------------------HRPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHK----LKLNCVHCQAIFTNKQRLNYHILTKHSG 422
                   CG T+    HL +H+ R H        +   C   F     L  H   KH+G
Sbjct: 5   THTCDYAGCGKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFARSDELTRH-YRKHTG 62

Query: 423 PNYKAWKCEKCDMRFVTNKNLKRHMKVH 450
             ++ ++C+KCD  F  + +L  HMK H
Sbjct: 63  --HRPFQCQKCDRAFSRSDHLALHMKRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.0 bits (113), Expect = 3e-07
 Identities = 17/86 (19%), Positives = 27/86 (31%), Gaps = 3/86 (3%)

Query: 278 GDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS-SIF 336
               Y C  C            H  +  +     C  C   + S  L+++HE        
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAA--VCPYCSLRFFSPELKQEHESKCEYKKL 70

Query: 337 QCRICDKILSNIQGIRRHMENMHNSD 362
            C  C +   +   I RH   +HN +
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 227 KCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY 286
           +C +C    S+      H      +    CP C       +   +H +      K TC  
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLE 74

Query: 287 CEKSFLYKKSLKHH 300
           C ++F    S+  H
Sbjct: 75  CMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.8 bits (97), Expect = 4e-05
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 306 SEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDN 365
           ++   +C +C+    S   +  HER   +   C  C     + +  + H           
Sbjct: 13  NKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESK-------C 65

Query: 366 TERPFQCNDCGSTFRLKRHLNSHINRLH 393
             +   C +C  TF+    +  H   +H
Sbjct: 66  EYKKLTCLECMRTFKSSFSIWRHQVEVH 93

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 9e-05
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 423 PNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICT 482
            N + ++C  C+ +  +      H ++         + C  C  ++      Q+H+  C 
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRNA-----AVCPYCSLRFFSPELKQEHESKCE 66

Query: 483 T---TCKSCGKRYSSIYVLRNHVKSCYGQQ 509
               TC  C + + S + +  H    + Q 
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.7 bits (89), Expect = 5e-04
 Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 335 IFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINRLHK 394
           ++QCR+C+  LS++     H     N+          C  C   F        H ++   
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLCRNA--------AVCPYCSLRFFSPELKQEHESKCEY 67

Query: 395 LKLNCVHCQAIFTNKQRLNYHILTKHS 421
            KL C+ C   F +   +  H +  H+
Sbjct: 68  KKLTCLECMRTFKSSFSIWRHQVEVHN 94

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 27/108 (25%), Positives = 37/108 (34%), Gaps = 27/108 (25%)

Query: 226 CKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT 285
           C  E CGK+F  ++ LKVH  +H  Q  ++CP  G                         
Sbjct: 4   CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG------------------------- 38

Query: 286 YCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYK-SDYLRRKHERSH 332
            C+K F     LK H  VH+     K   C  + K      +     H
Sbjct: 39  -CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 199 CEVCPMKFHRQVSLKKHVEAVHLKLKPCKC--EVCGKSFSNNSTLKVHSTTHADQGRFKC 256
            E C   F +   LK H +  H +  P +C  E C K FS  S LK H   HA     K 
Sbjct: 6   FENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64

Query: 257 PICGKHIRHKQTFDDHMNMH 276
             C    +   T+  ++   
Sbjct: 65  DSCSFVGK---TWTLYLKHV 81

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.1 bits (111), Expect = 8e-07
 Identities = 16/89 (17%), Positives = 24/89 (26%), Gaps = 4/89 (4%)

Query: 189 GVHLKIKRFKCEVCPMKFHRQVSLKKHV----EAVHLKLKPCKCEVCGKSFSNNSTLKVH 244
            +     +F+C+ C   +   V L  H+           +         S     +L   
Sbjct: 12  SIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM 71

Query: 245 STTHADQGRFKCPICGKHIRHKQTFDDHM 273
                 Q   KC  CG      Q    HM
Sbjct: 72  EGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.1 bits (106), Expect = 4e-06
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 3/85 (3%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLHKLKLNCVHC---QAIFTNKQRLNYHILTKHSGP 423
              F+C DC + +     L  H+N     + +            +K R    +  +    
Sbjct: 17  ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76

Query: 424 NYKAWKCEKCDMRFVTNKNLKRHMK 448
             K  KC  C   F + ++L  HM 
Sbjct: 77  AQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.6 bits (102), Expect = 1e-05
 Identities = 18/103 (17%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 236 SNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNM-----HSGDVKYTCTYCEKS 290
           S+ S+ K++ +      +F+C  C            HMN                    S
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 291 FLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHS 333
              K+SL        ++   KC  C   ++S      H     
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 164 GENKFKCQFCPMWFEQRGKRRKHVNGV-HLKIKRFKCEVCPMKFHRQVSLKKHV--EAVH 220
           G +KF+C+ C   ++   +   H+N   H +    + +    K   +   +  +  E   
Sbjct: 16  GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75

Query: 221 LKLKPCKCEVCGKSFSNNSTLKVH 244
              K  KC  CG SF +   L VH
Sbjct: 76  DAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 27/122 (22%)

Query: 272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERS 331
           + ++ +G  K+ C  C  ++     L  H+   +  +       D               
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETD--------------- 53

Query: 332 HSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHLNSHINR 391
                            + +           K++ ++  +C  CG +F   + L+ H+ +
Sbjct: 54  -----NNNPKRWSKPRKRSLLEMEG------KEDAQKVLKCMYCGHSFESLQDLSVHMIK 102

Query: 392 LH 393
             
Sbjct: 103 TK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 39.0 bits (90), Expect = 5e-04
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 425 YKAWKCEKCDMRFVTNKNLKRHMKV--HEKNRNMLDSSCNECGKQYKWESFLQKHKKICT 482
              ++C+ C   + T   L  HM    H ++ N    + N        +  L + +    
Sbjct: 17  ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76

Query: 483 T----TCKSCGKRYSSIYVLRNHVKS 504
                 C  CG  + S+  L  H+  
Sbjct: 77  AQKVLKCMYCGHSFESLQDLSVHMIK 102

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 44.7 bits (105), Expect = 1e-06
 Identities = 15/55 (27%), Positives = 23/55 (41%)

Query: 253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE 307
           ++ C  CG   +       H+  H+    Y CTYC  SF  K +L  H+   +  
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 43.2 bits (101), Expect = 4e-06
 Identities = 17/55 (30%), Positives = 20/55 (36%)

Query: 227 KCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVK 281
            CE CG      S LK H  TH D   + C  C    + K     HM   +   K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 211 SLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFD 270
           S  +  E    + +  KC+ CGKSFS++S L  H  TH  +  +KC  CGK    +    
Sbjct: 5   SSGRS-EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 271 DHMNMHSG 278
            H  +H+G
Sbjct: 64  GHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 5e-06
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           +R+KC+ C   F     L KH    H   KP KC+ CGK+F   S L  H   H
Sbjct: 17  RRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 19/70 (27%), Positives = 30/70 (42%)

Query: 238 NSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSL 297
           + +         ++ R+KC  CGK   H      H   H+G+  Y C  C K+F+ +  L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 298 KHHLFVHSSE 307
             H  VH+  
Sbjct: 63  IGHHRVHTGS 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 4e-06
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           K + C  C   F R   L +H + VH   KP KC  CGK+FS NS L  H   H
Sbjct: 13  KPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 28/84 (33%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYT 283
           KP  C  CGK+FS +S L                     ++H++        H+G+  Y 
Sbjct: 13  KPYGCVECGKAFSRSSIL---------------------VQHQRV-------HTGEKPYK 44

Query: 284 CTYCEKSFLYKKSLKHHLFVHSSE 307
           C  C K+F     L +H  +H+S 
Sbjct: 45  CLECGKAFSQNSGLINHQRIHTSG 68

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 193 KIKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKP--CKCEVCGKSFSNNSTLKVHSTTH 248
           K +   C+   C   + +   LK H+   H   KP  C  E C   F+ +  L  H   H
Sbjct: 12  KRRIHYCDYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70

Query: 249 ADQGRFKCPICGKHIRHKQTFDDHMNMH 276
                F+C +C +          HM  H
Sbjct: 71  TGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.1 bits (97), Expect = 7e-05
 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 195 KRFKC--EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHAD 250
           K +KC  E C  +F R   L +H    H   KP +C VC +SFS +  L +H   H +
Sbjct: 44  KPYKCTWEGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 10/99 (10%)

Query: 359 HNSDKDNTERPFQCN--DCGSTFRLKRHLNSHINRLHK----LKLNCVHCQAIFTNKQRL 412
            +       R   C+   C   +    HL +H+ R H      K     C   F     L
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFARSDEL 63

Query: 413 NYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHE 451
             H    H+G   K ++C  C+  F  + +L  HMK H+
Sbjct: 64  TRHYRK-HTG--AKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 7e-06
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHS 245
           + F CEVC   F RQ  LK+H    H   KP  C +C ++F+    L  H+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRH-YRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.5 bits (101), Expect = 8e-06
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMN-MHSGDV 280
           +   CEVC ++F+    LK H  +H ++  + C +C +    +     H   +HSG++
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 8e-06
 Identities = 62/433 (14%), Positives = 140/433 (32%), Gaps = 105/433 (24%)

Query: 85  ELYTPDFFQSLFGFSIFDCQDSE--WRDVLKKKQ--GVLHLKANGSRIHYPSEKTDVKQL 140
            ++   F  +      FDC+D +   + +L K++   ++  K   S           KQ 
Sbjct: 23  SVFEDAFVDN------FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE 76

Query: 141 RLDKMKSFTKKLHTRKYN---DKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRF 197
            +  ++ F +++    Y          E +       M+ EQR +     N   +  K  
Sbjct: 77  EM--VQKFVEEVLRINYKFLMSPIKT-EQRQPSMMTRMYIEQRDRLY---NDNQVFAKYN 130

Query: 198 KCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEV------CGKSFSNNSTLKVHSTTHADQ 251
              V  ++ + +  L++ +    L+L+P K  +       GK++        +      Q
Sbjct: 131 ---VSRLQPYLK--LRQAL----LELRPAKNVLIDGVLGSGKTWVALDVCLSYKV----Q 177

Query: 252 GRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK 311
            +    I   ++++  + +  + M    ++      + ++  +     ++ +      ++
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEM----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 312 CSVCDRLYKSDYLRRKHERS--------HSSI-----FQCRIC----DKILSNI--QGIR 352
                RL KS    + +E          ++         C+I      K +++       
Sbjct: 234 LR---RLLKS----KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 353 RHMENMHNSD---KDNTERPF-QCNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTN 408
            H+   H+S     D  +    +  DC     L R                   + + TN
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDC-RPQDLPR-------------------EVLTTN 326

Query: 409 KQRLNYHILTKHSGPN-YKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQ 467
            +RL+    +   G   +  WK          + N  +   + E + N+L+    E  K 
Sbjct: 327 PRRLSIIAESIRDGLATWDNWK----------HVNCDKLTTIIESSLNVLEP--AEYRKM 374

Query: 468 YKWESFLQKHKKI 480
           +   S       I
Sbjct: 375 FDRLSVFPPSAHI 387

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/25 (48%), Positives = 14/25 (56%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP  CE+CG  F +  TLK H   H
Sbjct: 10  KPYPCEICGTRFRHLQTLKSHLRIH 34

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 14/75 (18%), Positives = 18/75 (24%), Gaps = 8/75 (10%)

Query: 190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCK--------CEVCGKSFSNNSTL 241
           +         + C   F     L  HV   H+              C   GKSF     L
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78

Query: 242 KVHSTTHADQGRFKC 256
             H   H  +     
Sbjct: 79  VNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 18/96 (18%), Positives = 28/96 (29%), Gaps = 21/96 (21%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVH-STTHADQGRFKCPICGKHIRHKQTFDDHMNMHS 277
           +         + C ++FS    L  H +  H         +C                  
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE--------------- 63

Query: 278 GDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS 313
                 C    KSF  K  L +H+ VH+ E +   S
Sbjct: 64  -----ECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.8 bits (97), Expect = 7e-05
 Identities = 14/74 (18%), Positives = 25/74 (33%)

Query: 287 CEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILS 346
                L + S  + L    +     C +C   + S    ++H R       C +C K  +
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFT 111

Query: 347 NIQGIRRHMENMHN 360
           +      H+   HN
Sbjct: 112 STDSALDHVCKKHN 125

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.7 bits (94), Expect = 2e-04
 Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 16/128 (12%)

Query: 274 NMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSE------FTSKCSVCDRLYKSDYLR 325
           ++ SG  KY   +         ++  ++H      +        +       L +S YL 
Sbjct: 5   DVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64

Query: 326 RKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQCNDCGSTFRLKRHL 385
           R       S F C +C    S+   +++H+          TE    C  C   F      
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRY--------TEHTKVCPVCKKEFTSTDSA 116

Query: 386 NSHINRLH 393
             H+ + H
Sbjct: 117 LDHVCKKH 124

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           KP  C  C K+FS+ S L VH  THA++     
Sbjct: 9   KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 15/33 (45%), Positives = 17/33 (51%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           KPCKC  CGK+F   S L +H  TH D      
Sbjct: 11  KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 204 MKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHI 263
           M+ H   +L  +V    ++   C  E C + FS +  L  H   H  Q  F+C IC ++ 
Sbjct: 1   MEPHPMNNLLNYVV-PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 264 RHKQTFDDHMNMHS 277
                   H+  H+
Sbjct: 60  SRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 195 KRFKC--EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           + + C  E C  +F R   L +H+  +H   KP +C +C ++FS +  L  H  TH
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 8/72 (11%)

Query: 211 SLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFD 270
           S  K  + +HL  +  KC  CG  F   STL    T         C  C K    +   +
Sbjct: 5   SSGKR-QKIHLGDRSQKCSKCGIIFIRRSTLSRRKT-------PMCEKCRKDSCQEAALN 56

Query: 271 DHMNMHSGDVKY 282
                 SG    
Sbjct: 57  KDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.7 bits (87), Expect = 6e-04
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 8/59 (13%)

Query: 190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           +HL  +  KC  C + F R+ +L +         K   CE C K     + L       
Sbjct: 12  IHLGDRSQKCSKCGIIFIRRSTLSRR--------KTPMCEKCRKDSCQEAALNKDEGNE 62

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
             +  K  KC+VCGK FS +S L+ H   H  +     
Sbjct: 6   SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 217 EAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
            +     KP +C  CGKSFS +  L  H  TH  +     
Sbjct: 4   GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP KCE CG  F   + L+ H   H
Sbjct: 10  KPYKCETCGARFVQVAHLRAHVLIH 34

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/25 (56%), Positives = 16/25 (64%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP KC+VC KSF   S+L VH   H
Sbjct: 11  KPYKCDVCHKSFRYGSSLTVHQRIH 35

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           K  KC  C K+F+ +S+L VH   H
Sbjct: 11  KLFKCNECKKTFTQSSSLTVHQRIH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 14/25 (56%), Positives = 16/25 (64%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP KC++CGKSF   S L  HS  H
Sbjct: 11  KPFKCDICGKSFCGRSRLNRHSMVH 35

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           KP KC  CGK+F   S+L +H  TH+ +     
Sbjct: 11  KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 217 EAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
            +     K   C+ CGK+F   S L++H   H
Sbjct: 4   GSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC 259
           K   CE+CGK F +   L  H  +H+ +  +     
Sbjct: 11  KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 6e-04
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLH 393
            +  QC++CG  F LK HLN H  R+H
Sbjct: 10  TKSHQCHECGRGFTLKSHLNQH-QRIH 35

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/38 (31%), Positives = 15/38 (39%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
                KP KC  CGK+F  +S L  H   H  +     
Sbjct: 6   SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP +C  C K+F+  S L VH  TH
Sbjct: 11  KPFECSECQKAFNTKSNLIVHQRTH 35

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
               +KP  C  CGK+FS  S+L  H   H  +     
Sbjct: 6   SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 13/38 (34%), Positives = 15/38 (39%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
                KP KC  CGK F +NS L  H   H  +     
Sbjct: 6   SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 15/25 (60%), Positives = 16/25 (64%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP +C  CGKSFS NS L VH   H
Sbjct: 11  KPHECRECGKSFSFNSQLIVHQRIH 35

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
                KP +C  CGK+F++ S L  H   H  +     
Sbjct: 6   SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP  C  CGK+FS+ S L +H  TH
Sbjct: 11  KPYGCSECGKAFSSKSYLIIHMRTH 35

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           K  KC  C   FS  S+L++H   H
Sbjct: 11  KTWKCRECDMCFSQASSLRLHQNVH 35

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
                KP KCE CGK ++    L +H   H  +     
Sbjct: 6   SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 13/25 (52%), Positives = 16/25 (64%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP +C +CGKSF+  S L VH   H
Sbjct: 11  KPYECSICGKSFTKKSQLHVHQQIH 35

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 11/25 (44%), Positives = 12/25 (48%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
            P +C  CGK FS    L  H  TH
Sbjct: 11  NPYECCECGKVFSRKDQLVSHQKTH 35

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	514
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.72
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.71
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.69
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.68
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.68
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.67
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.66
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.65
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.65
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.59
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.58
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.58
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.57
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.55
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.54
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.53
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.5
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.48
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.45
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.45
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.45
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.43
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.38
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.38
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.38
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.36
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.35
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.33
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.33
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.32
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.31
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.3
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.25
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.23
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.22
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.2
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.18
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.15
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.12
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.12
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.02
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.01
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.0
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.99
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.98
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.98
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.98
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.98
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.97
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.97
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.97
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.95
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.95
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.93
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.93
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.92
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.91
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.9
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.86
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.86
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.84
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.83
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.82
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.82
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.81
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.8
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.79
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.79
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.79
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.79
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.78
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.78
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.77
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.77
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.76
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.76
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.75
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.74
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.74
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.73
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.69
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.67
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.66
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.66
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.65
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.64
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.64
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.62
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.62
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.59
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.51
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.5
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.38
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.34
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.33
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.29
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.28
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.28
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.25
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.24
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.22
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.22
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.21
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.17
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.09
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.02
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.01
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.01
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.0
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.0
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.98
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.97
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.96
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.95
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.94
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.93
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.93
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.92
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.92
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.91
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.9
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.12
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.89
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.86
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.86
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.85
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.84
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.83
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.81
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.0
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.79
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.77
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.94
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.73
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.73
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.72
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.72
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.71
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.71
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.63
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.63
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.79
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.62
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.61
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.6
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.59
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.59
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.55
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.66
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.46
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.46
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.11
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.11
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.04
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.41
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.83
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.18
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.67
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.2
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.12
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.17
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	91.2
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.61
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	90.3
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	87.64
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.95
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	80.83
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	80.44

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.5e-34  Score=264.19  Aligned_cols=181  Identities=32%  Similarity=0.692  Sum_probs=77.9

Q ss_pred             HHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccccccc
Q psy2973         212 LKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSF  291 (514)
Q Consensus       212 l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  291 (514)
                      |..|+ ..|.++++|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|
T Consensus         9 l~~h~-~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A            9 SVAQA-ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             chhhh-hhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            33443 33444444444444444444444444444444444444444444444444444444444444444444444444


Q ss_pred             CChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHHHhcCCccccCccccccCCHHHHHHHHHHhcCCCCCCCCCCcc
Q psy2973         292 LYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSSIFQCRICDKILSNIQGIRRHMENMHNSDKDNTERPFQ  371 (514)
Q Consensus       292 ~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~~~~  371 (514)
                      .+...|..|++.|+++++|.|+.|++.|.+...|..|+++|+                                ++++|.
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~--------------------------------~~~~~~  135 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT--------------------------------GEKPYK  135 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHH--------------------------------CCCCEE
T ss_pred             CCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhC--------------------------------CCCCeE
Confidence            444444444444444444444444444433333333333221                                134455


Q ss_pred             cCcCCcccCChHHHHHHHHhhcCCCccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHhhc
Q psy2973         372 CNDCGSTFRLKRHLNSHINRLHKLKLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       372 C~~C~~~f~~~~~L~~H~~~~h~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      |++|++.|.....|..|++                            .|.++  +||.|++|++.|.+...|..|+++|+
T Consensus       136 C~~C~~~f~~~~~L~~H~~----------------------------~H~~~--~~~~C~~C~~~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          136 CPECGKSFSREDNLHTHQR----------------------------THTGE--KPYKCPECGKSFSRRDALNVHQRTHT  185 (190)
T ss_dssp             CTTTCCEESCHHHHHHHHH----------------------------HHHCC--CCEECTTTCCEESSHHHHHHHHTTC-
T ss_pred             CCCCCcccCCHHHHHHHHH----------------------------hcCCC--CCeECCCCCCccCCHHHHHHHHHhcC
Confidence            5555555555555554443                            34444  67777777777777777778877777


Q ss_pred             CCCC
Q psy2973         452 KNRN  455 (514)
Q Consensus       452 ~~~~  455 (514)
                      +++|
T Consensus       186 ~~k~  189 (190)
T 2i13_A          186 GKKT  189 (190)
T ss_dssp             ----
T ss_pred             CCCC
Confidence            7765

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=5.5e-34  Score=260.50  Aligned_cols=174  Identities=30%  Similarity=0.618  Sum_probs=134.9

Q ss_pred             cCccccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccC
Q psy2973         158 NDKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSN  237 (514)
Q Consensus       158 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~  237 (514)
                      +...+.++++|.|+.|++.|.+...|..|++ .|.++++|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|.+
T Consensus        12 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~   89 (190)
T 2i13_A           12 QAALEPGEKPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPECGKSFSQ   89 (190)
T ss_dssp             -------------------CCSSHHHHHGGG-CC---CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESC
T ss_pred             hhhhcCCCCCCcCCCCccccCCHHHHHHHHH-HcCCCCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCcccCCccCC
Confidence            4455667888999999999999999999987 688888899999999999999999997 57888888999999999999


Q ss_pred             hhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCC
Q psy2973         238 NSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDR  317 (514)
Q Consensus       238 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  317 (514)
                      ...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+++|+++++|.|+.|++
T Consensus        90 ~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  169 (190)
T 2i13_A           90 RANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGK  169 (190)
T ss_dssp             HHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             HHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCC
Confidence            99999999998888889999999999999999999999988889999999999999999999999998888888888888


Q ss_pred             cCCCHHHHHHHHHhcC
Q psy2973         318 LYKSDYLRRKHERSHS  333 (514)
Q Consensus       318 ~f~~~~~l~~H~~~h~  333 (514)
                      .|.+...|..|+++|+
T Consensus       170 ~f~~~~~L~~H~~~H~  185 (190)
T 2i13_A          170 SFSRRDALNVHQRTHT  185 (190)
T ss_dssp             EESSHHHHHHHHTTC-
T ss_pred             ccCCHHHHHHHHHhcC
Confidence            8888888888888876

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=3.7e-29  Score=228.39  Aligned_cols=165  Identities=26%  Similarity=0.457  Sum_probs=97.9

Q ss_pred             CCCcccc--CcccccccChHHHHhhHhcccCCCCceec--cCCCcccccHHHHHHHHHHhhcCCCCeecc--cccccccC
Q psy2973         164 GENKFKC--QFCPMWFEQRGKRRKHVNGVHLKIKRFKC--EVCPMKFHRQVSLKKHVEAVHLKLKPCKCE--VCGKSFSN  237 (514)
Q Consensus       164 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~k~~~C--~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~--~C~~~f~~  237 (514)
                      +.++|.|  +.|++.|.+...|..|++ .|.++++|.|  +.|++.|.+...|..|+ ..|.++++|.|.  .|++.|.+
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~   86 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDLRFTT   86 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHH-HHHCCCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCCEESC
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHH-hcCCCCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCCccCC
Confidence            3455666  456666666666666665 4556666666  55666666666666665 456566666666  56666666


Q ss_pred             hhhhhhhh-hhc-cCCccccc--CCCcccccccccHHHHHHHhcCCCcccccc--cccccCChHHHHHhhhhcccCCccc
Q psy2973         238 NSTLKVHS-TTH-ADQGRFKC--PICGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSK  311 (514)
Q Consensus       238 ~~~L~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~  311 (514)
                      ...|..|+ +.| .+.++|.|  +.|++.|.+...|..|+++|+++++|.|+.  |++.|.+...|..|+++|++   |.
T Consensus        87 ~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~  163 (190)
T 1tf6_A           87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YP  163 (190)
T ss_dssp             HHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CC
T ss_pred             HHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---Cc
Confidence            66666666 444 24455666  556666666666666666666666666655  66666666666666665555   55


Q ss_pred             CCc---CCCcCCCHHHHHHHHHhcC
Q psy2973         312 CSV---CDRLYKSDYLRRKHERSHS  333 (514)
Q Consensus       312 C~~---C~~~f~~~~~l~~H~~~h~  333 (514)
                      |+.   |++.|.+...|..|+++|+
T Consensus       164 C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          164 CKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCCCcCCCccccHHHHHHHHHhhc
Confidence            555   5555555555555555554

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=4.7e-29  Score=227.66  Aligned_cols=167  Identities=27%  Similarity=0.573  Sum_probs=148.2

Q ss_pred             cCCCCceec--cCCCcccccHHHHHHHHHHhhcCCCCeec--ccccccccChhhhhhhhhhccCCcccccC--CCccccc
Q psy2973         191 HLKIKRFKC--EVCPMKFHRQVSLKKHVEAVHLKLKPCKC--EVCGKSFSNNSTLKVHSTTHADQGRFKCP--ICGKHIR  264 (514)
Q Consensus       191 h~~~k~~~C--~~C~~~f~~~~~l~~H~~~~H~~~k~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~  264 (514)
                      ....++|.|  +.|++.|.+...|..|+ +.|.++++|.|  +.|++.|.+...|..|+++|.++++|.|+  .|++.|.
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT   85 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEES
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccC
Confidence            345788999  68999999999999998 67889999999  88999999999999999999999999999  8999999


Q ss_pred             ccccHHHHH-HHh-cCCCcccc--cccccccCChHHHHHhhhhcccCCcccCCc--CCCcCCCHHHHHHHHHhcCCcccc
Q psy2973         265 HKQTFDDHM-NMH-SGDVKYTC--TYCEKSFLYKKSLKHHLFVHSSEFTSKCSV--CDRLYKSDYLRRKHERSHSSIFQC  338 (514)
Q Consensus       265 ~~~~L~~H~-~~h-~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~C  338 (514)
                      +...|..|+ +.| .++++|.|  +.|++.|.+...|..|+++|++++||.|+.  |++.|.+...|..|+++|++ |.|
T Consensus        86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~-~~C  164 (190)
T 1tf6_A           86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG-YPC  164 (190)
T ss_dssp             CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS-CCC
T ss_pred             CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC-CcC
Confidence            999999999 566 46789999  889999999999999999999999999988  99999999999999999887 888


Q ss_pred             Cc---cccccCCHHHHHHHHHHhc
Q psy2973         339 RI---CDKILSNIQGIRRHMENMH  359 (514)
Q Consensus       339 ~~---C~~~f~~~~~l~~H~~~~H  359 (514)
                      ..   |++.|.+...|..|++.+|
T Consensus       165 ~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          165 KKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             CSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             CCCCcCCCccccHHHHHHHHHhhc
Confidence            88   8888888888888875443

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=7e-25  Score=192.95  Aligned_cols=143  Identities=25%  Similarity=0.481  Sum_probs=75.3

Q ss_pred             ccccCcccccccChHHHHhhHhc--ccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhh
Q psy2973         167 KFKCQFCPMWFEQRGKRRKHVNG--VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVH  244 (514)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~--~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H  244 (514)
                      +|.|+.|++.|.+...|..|++.  +|.++++|.|++|+                        |..|++.|.+...|..|
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~------------------------C~~c~~~f~~~~~l~~H   58 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG------------------------CSRELRPFKAQYMLVVH   58 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT------------------------CTTTTCCCSSHHHHHHH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC------------------------ccchhhhhhhHHHHHHH
Confidence            45555555555555555555542  34445555554321                        12223555555555555


Q ss_pred             hhhccCCcccccCC--CcccccccccHHHHHHHhcCCCcccccc--cccccCChHHHHHhh-hhcccCCcccCCc--CCC
Q psy2973         245 STTHADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHL-FVHSSEFTSKCSV--CDR  317 (514)
Q Consensus       245 ~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~~--C~~  317 (514)
                      ++.|.++++|.|++  |++.|.+...|..|+++|+++++|.|+.  |++.|.+...|..|+ +.|.++++|.|+.  |++
T Consensus        59 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~  138 (155)
T 2gli_A           59 MRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTK  138 (155)
T ss_dssp             THHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCC
T ss_pred             HHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCcc
Confidence            55555555555553  5555555555555555555555555555  555555555555555 4555555555555  555


Q ss_pred             cCCCHHHHHHHHHhcC
Q psy2973         318 LYKSDYLRRKHERSHS  333 (514)
Q Consensus       318 ~f~~~~~l~~H~~~h~  333 (514)
                      .|.+...|..|+++|+
T Consensus       139 ~f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          139 RYTDPSSLRKHVKTVH  154 (155)
T ss_dssp             EESSHHHHHHHHHHSC
T ss_pred             ccCCHHHHHHHHHhhc
Confidence            5555555555555543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=7.7e-25  Score=192.68  Aligned_cols=129  Identities=26%  Similarity=0.449  Sum_probs=90.9

Q ss_pred             ccccccCc---cccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecc
Q psy2973         153 HTRKYNDK---FSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCE  229 (514)
Q Consensus       153 ~~~~~~~~---~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~  229 (514)
                      ..+..+..   .+.++++|.|+.|+                        |..|++.|.+...|..|+ ..|.++++|.|+
T Consensus        17 ~~L~~H~~~~h~h~~~~~~~C~~c~------------------------C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~   71 (155)
T 2gli_A           17 EQLVHHINSEHIHGERKEFVCHWGG------------------------CSRELRPFKAQYMLVVHM-RRHTGEKPHKCT   71 (155)
T ss_dssp             HHHHHHHHHHTSSSCSSCCCCCBTT------------------------CTTTTCCCSSHHHHHHHT-HHHHCCCCCCCC
T ss_pred             HHHHHHHHhhccCCCCcceeCCCCC------------------------ccchhhhhhhHHHHHHHH-HhcCCCCCccCC
Confidence            44445554   57788999998763                        666777777777777775 456666677776


Q ss_pred             c--ccccccChhhhhhhhhhccCCcccccCC--CcccccccccHHHHH-HHhcCCCcccccc--cccccCChHHHHHhhh
Q psy2973         230 V--CGKSFSNNSTLKVHSTTHADQGRFKCPI--CGKHIRHKQTFDDHM-NMHSGDVKYTCTY--CEKSFLYKKSLKHHLF  302 (514)
Q Consensus       230 ~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~  302 (514)
                      .  |++.|.+...|..|+++|.++++|.|++  |++.|.+...|..|+ ++|.++++|.|+.  |++.|.+...|..|++
T Consensus        72 ~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A           72 FEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             STTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence            4  7777777777777777777777777776  777777777777776 6677777777766  7777777777777777


Q ss_pred             hccc
Q psy2973         303 VHSS  306 (514)
Q Consensus       303 ~H~~  306 (514)
                      +|+|
T Consensus       152 ~hhg  155 (155)
T 2gli_A          152 TVHG  155 (155)
T ss_dssp             HSCC
T ss_pred             hhcC
Confidence            6654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=3.5e-22  Score=175.66  Aligned_cols=120  Identities=27%  Similarity=0.505  Sum_probs=81.5

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCC--------eecccccccccChhhhhhhhhhccCCcccccCC--Ccccc
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKP--------CKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPI--CGKHI  263 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~--------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f  263 (514)
                      ..+|.|..|++.|.+...|..|++..|.+..+        |.|..|++.|.+...|..|+++|.++++|.|.+  |++.|
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  102 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF  102 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEE
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCcc
Confidence            34455555555555555555554333444332        667777777777777777777777777777776  77777


Q ss_pred             cccccHHHHHHHhcCCCcccccc--cccccCChHHHHHhhhhcccCCcccCC
Q psy2973         264 RHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       264 ~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .+...|..|+++|+++++|.|..  |++.|.+...|..|+++|++++||.|+
T Consensus       103 ~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          103 ARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            77777777777777777777775  777777777777777777777777764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=3.3e-23  Score=176.49  Aligned_cols=106  Identities=23%  Similarity=0.403  Sum_probs=77.6

Q ss_pred             hHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccc
Q psy2973         186 HVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRH  265 (514)
Q Consensus       186 H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~  265 (514)
                      |...+|.|+++|.|++|++.|.+...|..|+ ++|.+++||.|++|++.|.+...|..|+++|++++||.|++|++.|.+
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHF-NIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHH-HHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHH-HHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            3344677777888888888888888888886 567777777777777777777777777777777777777777777777


Q ss_pred             cccHHHHHHHhcCCCc------ccccccccccC
Q psy2973         266 KQTFDDHMNMHSGDVK------YTCTYCEKSFL  292 (514)
Q Consensus       266 ~~~L~~H~~~h~~~~~------~~C~~C~~~f~  292 (514)
                      ...|..|+++|++++|      |.|..|++.|.
T Consensus        91 ~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            7777777777766543      45555555543

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=3.4e-22  Score=167.37  Aligned_cols=111  Identities=26%  Similarity=0.627  Sum_probs=59.5

Q ss_pred             CCCceeccC--CCcccccHHHHHHHHHHhhcCCCCeecc--cccccccChhhhhhhhhhccCCcccccCCCccccccccc
Q psy2973         193 KIKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCE--VCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQT  268 (514)
Q Consensus       193 ~~k~~~C~~--C~~~f~~~~~l~~H~~~~H~~~k~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  268 (514)
                      ++++|.|.+  |++.|.+...|..|+ ..|.++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|.+...
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            345555554  555555555555554 345555555555  455555555555555555555555555555555555555


Q ss_pred             HHHHHHHhcCCCcccc--cccccccCChHHHHHhhhhc
Q psy2973         269 FDDHMNMHSGDVKYTC--TYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       269 L~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H  304 (514)
                      |..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            5555555555555555  44555555555555555443

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=7.4e-22  Score=173.58  Aligned_cols=116  Identities=22%  Similarity=0.385  Sum_probs=90.0

Q ss_pred             CccccccccccCChHHHHHHHHhhcCCCCC------CcccccccccccCChHHHHHHHHhhcCCCCcccccccc--cccc
Q psy2973         396 KLNCVHCQAIFTNKQRLNYHILTKHSGPNY------KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNE--CGKQ  467 (514)
Q Consensus       396 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~------k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~  467 (514)
                      +|.|.+|++.|.+...|..|++.+|.+...      .+|.|++|++.|.+...|..|+++|+++++   |.|..  |++.
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---~~C~~~~C~~~  101 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP---FPCPFPGCGKI  101 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCS---EECSCTTTCCE
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCc---ccCCcCCCCCc
Confidence            455555555555555555555544554311      127888888888888888888888888877   78887  8888


Q ss_pred             cCChhhHHHHhcccc----ccccc--ccccccCHHHHHHhhhhhhCCCCCCCC
Q psy2973         468 YKWESFLQKHKKICT----TTCKS--CGKRYSSIYVLRNHVKSCYGQQKNLSH  514 (514)
Q Consensus       468 f~~~~~L~~H~~~h~----~~C~~--C~~~f~~~~~l~~H~~~h~ge~~~~c~  514 (514)
                      |.+...|..|+++|+    |.|.+  |++.|.+...|..|+++|+|++||.|+
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            888888888888876    88997  999999999999999999999999995

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.86  E-value=2.2e-22  Score=171.41  Aligned_cols=104  Identities=23%  Similarity=0.375  Sum_probs=66.8

Q ss_pred             CccccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccCh
Q psy2973         159 DKFSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNN  238 (514)
Q Consensus       159 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~  238 (514)
                      ..++.|+++|.|++|++.|.+...|..|++ +|.++++|.|++|++.|.+...|..|+ .+|++++||.|++|++.|.+.
T Consensus        14 ~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           14 ELIVDGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEETTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEESSH
T ss_pred             eeecCCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCcCCH
Confidence            345556666666666666666666666665 566666666666666666666666665 456666666666666666666


Q ss_pred             hhhhhhhhhccCCc------ccccCCCccccc
Q psy2973         239 STLKVHSTTHADQG------RFKCPICGKHIR  264 (514)
Q Consensus       239 ~~L~~H~~~h~~~~------~~~C~~C~~~f~  264 (514)
                      +.|..|+++|++++      +|.|.+|++.|.
T Consensus        92 ~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             HHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             HHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            66666666665442      356666666554

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=8.8e-22  Score=164.80  Aligned_cols=112  Identities=23%  Similarity=0.537  Sum_probs=82.3

Q ss_pred             cCCCCeeccc--ccccccChhhhhhhhhhccCCcccccC--CCcccccccccHHHHHHHhcCCCcccccccccccCChHH
Q psy2973         221 LKLKPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKS  296 (514)
Q Consensus       221 ~~~k~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  296 (514)
                      +++++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+...
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   81 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDH   81 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHH
Confidence            3566777765  777777777777777777777777777  577777777777777777777777777777777777777


Q ss_pred             HHHhhhhcccCCcccC--CcCCCcCCCHHHHHHHHHhc
Q psy2973         297 LKHHLFVHSSEFTSKC--SVCDRLYKSDYLRRKHERSH  332 (514)
Q Consensus       297 L~~H~~~H~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  332 (514)
                      |..|+++|+++++|.|  +.|++.|.+...|..|+++|
T Consensus        82 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            7777777777777777  67777777777777777665

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.6e-21  Score=164.39  Aligned_cols=108  Identities=30%  Similarity=0.653  Sum_probs=56.6

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhh---ccCCcccccCCCcccccccccHH
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTT---HADQGRFKCPICGKHIRHKQTFD  270 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~L~  270 (514)
                      +++|.|++|++.|.+...|..|+ ..|.++++|.|+.|++.|.+...|..|++.   +.++++|.|++|++.|.+...|.
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHN-RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHH-HHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHH-HhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            34444444544444444444444 344444445555555555444445444442   33445555555555555555555


Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhh
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      .|+++|+++++|.|++|++.|.+...|..|++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            55555555555555555555555555555554

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=1.3e-21  Score=164.92  Aligned_cols=109  Identities=28%  Similarity=0.580  Sum_probs=59.0

Q ss_pred             CCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHH---hcCCCcccccccccccCChHHHH
Q psy2973         222 KLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNM---HSGDVKYTCTYCEKSFLYKKSLK  298 (514)
Q Consensus       222 ~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~---h~~~~~~~C~~C~~~f~~~~~L~  298 (514)
                      ++++|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|++.   +.++++|.|++|++.|.+...|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            345555555555555555555555555555555555555555555555555553   34445555555555555555555


Q ss_pred             HhhhhcccCCcccCCcCCCcCCCHHHHHHHHH
Q psy2973         299 HHLFVHSSEFTSKCSVCDRLYKSDYLRRKHER  330 (514)
Q Consensus       299 ~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~  330 (514)
                      .|+++|++++||.|++|++.|.+...|..|++
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            55555555555555555555555544444443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1e-21  Score=165.75  Aligned_cols=115  Identities=30%  Similarity=0.661  Sum_probs=63.8

Q ss_pred             CCceecc--CCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCC--CcccccccccH
Q psy2973         194 IKRFKCE--VCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPI--CGKHIRHKQTF  269 (514)
Q Consensus       194 ~k~~~C~--~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L  269 (514)
                      +++|.|+  .|++.|.+...|..|+ ..| +.++|.|..|++.|.+...|..|+++|.++++|.|++  |++.|.+...|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   80 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL   80 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHH
Confidence            3455555  5666665555566664 344 5555666666666666666666666665555666654  66666666666


Q ss_pred             HHHHHHhcCCCccccc--ccccccCChHHHHHhhhhcccCCcc
Q psy2973         270 DDHMNMHSGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSEFTS  310 (514)
Q Consensus       270 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~  310 (514)
                      ..|+++|+++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        81 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           81 RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            6666666666666663  3666666666666666666555443

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=4.5e-21  Score=161.76  Aligned_cols=117  Identities=27%  Similarity=0.553  Sum_probs=103.5

Q ss_pred             CCCccccC--cccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeeccc--ccccccChh
Q psy2973         164 GENKFKCQ--FCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEV--CGKSFSNNS  239 (514)
Q Consensus       164 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~--C~~~f~~~~  239 (514)
                      ++++|.|+  .|++.|.+...|..|++ .| ++++|.|++|++.|.+...|..|+ ..|.++++|.|..  |++.|.+..
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHG-GG-SCCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHH-Hc-CCCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHH
Confidence            35789999  89999999999999998 68 889999999999999999999997 6899999999986  999999999


Q ss_pred             hhhhhhhhccCCcccccC--CCcccccccccHHHHHHHhcCCCccc
Q psy2973         240 TLKVHSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYT  283 (514)
Q Consensus       240 ~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~  283 (514)
                      .|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++++++
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence            999999999999999996  59999999999999999999988763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=6.9e-18  Score=137.90  Aligned_cols=88  Identities=28%  Similarity=0.592  Sum_probs=40.3

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHH
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHM  273 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  273 (514)
                      +++|.|.+|++.|.+...|..|+ ..|.++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+...|..|+
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHE-RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHH-HHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CcCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            34444555555554444444444 33444444444444444444444444444444444444444444444444444444


Q ss_pred             HHhcCCCcc
Q psy2973         274 NMHSGDVKY  282 (514)
Q Consensus       274 ~~h~~~~~~  282 (514)
                      ++|+++++|
T Consensus        94 ~~H~~~~~~  102 (106)
T 2ee8_A           94 TLHMQTSSP  102 (106)
T ss_dssp             HHTTSCCCC
T ss_pred             HHhCCCCCC
Confidence            444444443

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.72  E-value=1.6e-17  Score=135.78  Aligned_cols=85  Identities=25%  Similarity=0.525  Sum_probs=79.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHHhcccc----cccccccccccCHHHHHHh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICT----TTCKSCGKRYSSIYVLRNH  501 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~----~~C~~C~~~f~~~~~l~~H  501 (514)
                      ++|.|.+|++.|.+...|..|+++|+++++   |.|++|++.|.+...|..|+++|.    |.|.+|++.|.+...|..|
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H   92 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERP---YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH   92 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCC---CBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCC---cCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHH
Confidence            789999999999999999999999998887   899999999999999999999886    8999999999999999999


Q ss_pred             hhhhhCCCCCCC
Q psy2973         502 VKSCYGQQKNLS  513 (514)
Q Consensus       502 ~~~h~ge~~~~c  513 (514)
                      +++|+|++||.+
T Consensus        93 ~~~H~~~~~~~~  104 (106)
T 2ee8_A           93 KTLHMQTSSPTA  104 (106)
T ss_dssp             HHHTTSCCCCCC
T ss_pred             HHHhCCCCCCcC
Confidence            999999999975

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.71  E-value=9.2e-18  Score=134.46  Aligned_cols=89  Identities=29%  Similarity=0.579  Sum_probs=57.7

Q ss_pred             cCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHh
Q psy2973         221 LKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHH  300 (514)
Q Consensus       221 ~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  300 (514)
                      .++++|.|.+|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|.+|++.|.+...|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            34556666666666666666666666666666666666666666666666666666666666666666666666666666


Q ss_pred             hhhcccCCc
Q psy2973         301 LFVHSSEFT  309 (514)
Q Consensus       301 ~~~H~~~~~  309 (514)
                      +++|+++.+
T Consensus        84 ~~~h~~~~~   92 (96)
T 2dmd_A           84 LRSHTGDSG   92 (96)
T ss_dssp             HTTCCSCCC
T ss_pred             HHHhcCCCC
Confidence            666666543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=7.8e-18  Score=133.10  Aligned_cols=85  Identities=26%  Similarity=0.645  Sum_probs=46.8

Q ss_pred             CCCeecc--cccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHh
Q psy2973         223 LKPCKCE--VCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHH  300 (514)
Q Consensus       223 ~k~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  300 (514)
                      +++|.|+  .|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|..|++.|.+...|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            3455554  35555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             hhhcccC
Q psy2973         301 LFVHSSE  307 (514)
Q Consensus       301 ~~~H~~~  307 (514)
                      +++|+++
T Consensus        82 ~~~H~~~   88 (90)
T 1a1h_A           82 TKIHLRQ   88 (90)
T ss_dssp             HGGGGC-
T ss_pred             HHHhccc
Confidence            5555544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=6e-18  Score=140.50  Aligned_cols=97  Identities=20%  Similarity=0.200  Sum_probs=77.6

Q ss_pred             ChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHH--hcCCCccc-cccccccc--CChHHHHHhhhhcccCCccc
Q psy2973         237 NNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNM--HSGDVKYT-CTYCEKSF--LYKKSLKHHLFVHSSEFTSK  311 (514)
Q Consensus       237 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~L~~H~~~H~~~~~~~  311 (514)
                      ....|..|+++|.++++|.|++|++.|.+...|..|+++  |.+.+++. |.+|++.|  .....|..|+++|++++||.
T Consensus         3 s~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             cchhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            346678888888888888888888888888888888887  66666554 88888877  77888888888888888888


Q ss_pred             CCcCCCcCCCHHHHHHHHHhcC
Q psy2973         312 CSVCDRLYKSDYLRRKHERSHS  333 (514)
Q Consensus       312 C~~C~~~f~~~~~l~~H~~~h~  333 (514)
                      |++|++.|.+...|..|++.|+
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhC
Confidence            8888888888888888877765

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.69  E-value=1.3e-17  Score=138.43  Aligned_cols=102  Identities=18%  Similarity=0.269  Sum_probs=75.6

Q ss_pred             HHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHh--hcCCCCe-ecccccccc--cChhhhhhhhhhccCCcccc
Q psy2973         181 GKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAV--HLKLKPC-KCEVCGKSF--SNNSTLKVHSTTHADQGRFK  255 (514)
Q Consensus       181 ~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~--H~~~k~~-~C~~C~~~f--~~~~~L~~H~~~h~~~~~~~  255 (514)
                      ..|..|++ +|.++++|.|++|++.|.+...|..|++ .  |.+.+++ .|.+|++.|  .....|..|+++|.++++|.
T Consensus         5 ~~l~~H~~-~H~~~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~   82 (115)
T 2dmi_A            5 SSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCC-CCCCCCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB
T ss_pred             hhhhhhee-eeCCCCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE
Confidence            44667776 6888888888888888888888888874 4  5455544 488888777  77778888888887777777


Q ss_pred             cCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         256 CPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       256 C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |++|++.|.....|..|+++|+......+
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             CCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            77777777777777777777766554443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.9e-17  Score=135.54  Aligned_cols=92  Identities=20%  Similarity=0.308  Sum_probs=57.2

Q ss_pred             hhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHH
Q psy2973         219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLK  298 (514)
Q Consensus       219 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  298 (514)
                      .|.++++|.|.+|++.|.....|..|+++|  .++|.|.+|++.|.....|..|++ |+++++|.|.+|++.|.+...|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            344555555555555555555555555555  245666666666666666666664 66666677777777777777777


Q ss_pred             Hhhh-hcccCCcccCC
Q psy2973         299 HHLF-VHSSEFTSKCS  313 (514)
Q Consensus       299 ~H~~-~H~~~~~~~C~  313 (514)
                      .|++ .|.++++|.|.
T Consensus        87 ~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           87 RHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHTSCCCCCCCCC
T ss_pred             HHHHHHcCCCCCCCCC
Confidence            7765 66666666553

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.68  E-value=1.6e-17  Score=128.82  Aligned_cols=78  Identities=35%  Similarity=0.718  Sum_probs=29.9

Q ss_pred             ecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhc
Q psy2973         227 KCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       227 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      .|..|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+++|
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            333333333333333333333333333333333333333333333333333333333333333333333333333333

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=4.3e-17  Score=130.50  Aligned_cols=87  Identities=30%  Similarity=0.644  Sum_probs=46.5

Q ss_pred             CCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhh
Q psy2973         164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKV  243 (514)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~  243 (514)
                      ++++|.|.+|++.|.+...|..|++ .|.++++|.|++|++.|.....|..|+ ..|.++++|.|.+|++.|.+...|..
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGG-GCCCCCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHH-hcCCCCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHHHHHH
Confidence            4455555555555555555555554 455555555555555555555555554 34555555555555555555555555


Q ss_pred             hhhhccCCc
Q psy2973         244 HSTTHADQG  252 (514)
Q Consensus       244 H~~~h~~~~  252 (514)
                      |+++|++++
T Consensus        83 H~~~h~~~~   91 (96)
T 2dmd_A           83 HLRSHTGDS   91 (96)
T ss_dssp             HHTTCCSCC
T ss_pred             HHHHhcCCC
Confidence            555554443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.67  E-value=4.9e-17  Score=128.45  Aligned_cols=86  Identities=28%  Similarity=0.665  Sum_probs=59.0

Q ss_pred             CCceecc--CCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHH
Q psy2973         194 IKRFKCE--VCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDD  271 (514)
Q Consensus       194 ~k~~~C~--~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  271 (514)
                      +++|.|+  .|++.|.+...|..|+ +.|.++++|.|..|++.|.+...|..|+++|+++++|.|++|++.|.+...|..
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            4567776  4777777777777775 456666777777777777777777777777777777777777777777777777


Q ss_pred             HHHHhcCCC
Q psy2973         272 HMNMHSGDV  280 (514)
Q Consensus       272 H~~~h~~~~  280 (514)
                      |+++|++++
T Consensus        81 H~~~H~~~k   89 (90)
T 1a1h_A           81 HTKIHLRQK   89 (90)
T ss_dssp             HHGGGGC--
T ss_pred             HHHHhcccC
Confidence            777776654

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.67  E-value=4.5e-17  Score=126.19  Aligned_cols=81  Identities=36%  Similarity=0.785  Sum_probs=76.5

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHHHhc
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSH  332 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h  332 (514)
                      ||.|++|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999887


Q ss_pred             C
Q psy2973         333 S  333 (514)
Q Consensus       333 ~  333 (514)
                      +
T Consensus        81 ~   81 (82)
T 2kmk_A           81 T   81 (82)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=9.8e-17  Score=128.13  Aligned_cols=79  Identities=30%  Similarity=0.716  Sum_probs=38.2

Q ss_pred             CCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCC--CcccccccccccCChHHHHHh
Q psy2973         223 LKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD--VKYTCTYCEKSFLYKKSLKHH  300 (514)
Q Consensus       223 ~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~--~~~~C~~C~~~f~~~~~L~~H  300 (514)
                      +++|.|.+|++.|.+...|..|+++|.++++|.|++|++.|.+...|..|+++|+++  ++|.|.+|++.|.+...|..|
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H   84 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGH   84 (95)
T ss_dssp             CSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHH
T ss_pred             CCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHH
Confidence            344444444444444444444444444444444444444444444444444444443  445555555555555555555


Q ss_pred             h
Q psy2973         301 L  301 (514)
Q Consensus       301 ~  301 (514)
                      +
T Consensus        85 ~   85 (95)
T 2yt9_A           85 I   85 (95)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=2.3e-16  Score=125.94  Aligned_cols=85  Identities=26%  Similarity=0.494  Sum_probs=64.9

Q ss_pred             cCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccC--CcccCCcCCCcCCCHHHHH
Q psy2973         249 ADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE--FTSKCSVCDRLYKSDYLRR  326 (514)
Q Consensus       249 ~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~--~~~~C~~C~~~f~~~~~l~  326 (514)
                      .++++|.|++|++.|.+...|..|+++|+++++|.|..|++.|.+...|..|++.|+++  ++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            35677888888888888888888888888888888888888888888888888877775  6777777777777777777


Q ss_pred             HHHH-hcC
Q psy2973         327 KHER-SHS  333 (514)
Q Consensus       327 ~H~~-~h~  333 (514)
                      .|++ .|.
T Consensus        83 ~H~~~~H~   90 (95)
T 2yt9_A           83 GHIKQVHS   90 (95)
T ss_dssp             HHHHHTSC
T ss_pred             HHHHHhcC
Confidence            7764 454

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=6.6e-17  Score=132.99  Aligned_cols=82  Identities=30%  Similarity=0.570  Sum_probs=34.8

Q ss_pred             CCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHH
Q psy2973         250 DQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHE  329 (514)
Q Consensus       250 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~  329 (514)
                      ++++|.| .|++.|.+...|..|+++|+++++|.|.+|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV   85 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHH
Confidence            3334444 344444444444444444444444444444444444444444444444444444444444444444444444


Q ss_pred             Hhc
Q psy2973         330 RSH  332 (514)
Q Consensus       330 ~~h  332 (514)
                      +.|
T Consensus        86 ~~~   88 (110)
T 2csh_A           86 TSC   88 (110)
T ss_dssp             HHH
T ss_pred             HHc
Confidence            443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.1e-16  Score=130.99  Aligned_cols=91  Identities=14%  Similarity=0.317  Sum_probs=47.7

Q ss_pred             cccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhh
Q psy2973         161 FSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNST  240 (514)
Q Consensus       161 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~  240 (514)
                      .+.++++|.|.+|++.|.+...|..|++ .|  .++|.|.+|++.|.....|..|+ . |.++++|.|.+|++.|.....
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~H--~~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~~~~~   84 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHER-LC--RNAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFKSSFS   84 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHH-HH--HHSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECSSHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHH-HC--CCCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhCCHHH
Confidence            3445555555555555555555555554 34  24455555555555555555554 2 555555555555555555555


Q ss_pred             hhhhhh-hccCCccccc
Q psy2973         241 LKVHST-THADQGRFKC  256 (514)
Q Consensus       241 L~~H~~-~h~~~~~~~C  256 (514)
                      |..|++ .|.++++|.|
T Consensus        85 L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           85 IWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHHHTSCCCCCCCC
T ss_pred             HHHHHHHHcCCCCCCCC
Confidence            555554 4555554443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.1e-16  Score=130.00  Aligned_cols=87  Identities=30%  Similarity=0.635  Sum_probs=80.3

Q ss_pred             hhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHH
Q psy2973         219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLK  298 (514)
Q Consensus       219 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~  298 (514)
                      .|+++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|.+|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788899999 899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhhccc
Q psy2973         299 HHLFVHSS  306 (514)
Q Consensus       299 ~H~~~H~~  306 (514)
                      .|++.|+.
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99998864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=2.9e-16  Score=123.57  Aligned_cols=79  Identities=22%  Similarity=0.450  Sum_probs=70.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHHhcccc---cccccccccccCHHHHHHhh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICT---TTCKSCGKRYSSIYVLRNHV  502 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~---~~C~~C~~~f~~~~~l~~H~  502 (514)
                      +||.|++|++.|.+...|..|+++|+++++   |.|+.|+++|.+...|..|+++|+   |.|..|++.|.+...|..|+
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~---~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKP---FACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCC---EECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCC---ccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHH
Confidence            688999999999999999999999988887   889999999999999999988887   78999999999999999999


Q ss_pred             hhhhC
Q psy2973         503 KSCYG  507 (514)
Q Consensus       503 ~~h~g  507 (514)
                      +.+|+
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.59  E-value=7.5e-16  Score=110.83  Aligned_cols=57  Identities=30%  Similarity=0.576  Sum_probs=36.5

Q ss_pred             CcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccC
Q psy2973         251 QGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       251 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      ++||.|.+||+.|.....|..|+++|++++||.|.+||+.|...+.|..|+++|+++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            456666666666666666666666666666666666666666666666666666654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.58  E-value=1.3e-15  Score=119.94  Aligned_cols=81  Identities=27%  Similarity=0.655  Sum_probs=43.1

Q ss_pred             CCeeccc--ccccccChhhhhhhhhhccCCcccccC--CCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHH
Q psy2973         224 KPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKH  299 (514)
Q Consensus       224 k~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  299 (514)
                      ++|.|..  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            3455555  555555555555555555555555554  355555555555555555555555555555555555555555


Q ss_pred             hhhhc
Q psy2973         300 HLFVH  304 (514)
Q Consensus       300 H~~~H  304 (514)
                      |+++|
T Consensus        84 H~~~H   88 (89)
T 2wbs_A           84 HMKRH   88 (89)
T ss_dssp             HGGGG
T ss_pred             HHHhh
Confidence            55544

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=1.9e-15  Score=121.78  Aligned_cols=73  Identities=25%  Similarity=0.516  Sum_probs=27.6

Q ss_pred             CcccccccccHHHHHHHhcCCCccccc--ccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHHHh
Q psy2973         259 CGKHIRHKQTFDDHMNMHSGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERS  331 (514)
Q Consensus       259 C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~  331 (514)
                      |++.|.....|..|+++|+++++|.|.  .|++.|.+...|..|+++|+++++|.|++|++.|.+...|..|+++
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   97 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKR   97 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHH
Confidence            333333333333333333333333332  2333333333333333333333333333333333333333333333

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=9e-16  Score=110.39  Aligned_cols=56  Identities=29%  Similarity=0.660  Sum_probs=28.4

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccC
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHAD  250 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~  250 (514)
                      ||||.|++|++.|...+.|..|+ ++|++++||.|++||++|...+.|..|+++|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHR-RAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHH-HHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHH-HHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            34555555555555555555554 345555555555555555555555555555444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.57  E-value=1.8e-15  Score=119.06  Aligned_cols=82  Identities=24%  Similarity=0.534  Sum_probs=75.7

Q ss_pred             CcccccCC--CcccccccccHHHHHHHhcCCCccccc--ccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHH
Q psy2973         251 QGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRR  326 (514)
Q Consensus       251 ~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~  326 (514)
                      ..+|.|++  |++.|.+...|..|+++|+++++|.|+  .|++.|.+...|..|+++|+++++|.|+.|++.|.+...|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  59999999999999999999999999999999999999999


Q ss_pred             HHHHhc
Q psy2973         327 KHERSH  332 (514)
Q Consensus       327 ~H~~~h  332 (514)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999887

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.57  E-value=4.4e-15  Score=119.58  Aligned_cols=85  Identities=27%  Similarity=0.569  Sum_probs=77.8

Q ss_pred             CCCCeeccc--ccccccChhhhhhhhhhccCCcccccC--CCcccccccccHHHHHHHhcCCCcccccccccccCChHHH
Q psy2973         222 KLKPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSL  297 (514)
Q Consensus       222 ~~k~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L  297 (514)
                      ..++|.|..  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|.+|++.|.+...|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            456799996  999999999999999999999999996  6999999999999999999999999999999999999999


Q ss_pred             HHhhhhccc
Q psy2973         298 KHHLFVHSS  306 (514)
Q Consensus       298 ~~H~~~H~~  306 (514)
                      ..|+++|++
T Consensus        92 ~~H~~~H~~  100 (100)
T 2ebt_A           92 ALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhCC
Confidence            999998864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.55  E-value=3.5e-16  Score=123.08  Aligned_cols=80  Identities=23%  Similarity=0.453  Sum_probs=50.5

Q ss_pred             CCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhh
Q psy2973         224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       224 k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      +||.|++|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++ .+|.|+.|++.|.+...|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4566666666666666666666666666666666666666666666666666653 556666666666666666666664


Q ss_pred             c
Q psy2973         304 H  304 (514)
Q Consensus       304 H  304 (514)
                      +
T Consensus        81 ~   81 (88)
T 1llm_C           81 L   81 (88)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=6.3e-15  Score=115.12  Aligned_cols=80  Identities=19%  Similarity=0.338  Sum_probs=69.9

Q ss_pred             hhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCC----CcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         240 TLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD----VKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       240 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~----~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|.+|+++|.++++|.|.+|++.|.....|..|+++|++.    ++|.|.+|++.|.+...|..|+++|+++.++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            4678888998889999999999999999999998887765    689999999999999999999999999999999998


Q ss_pred             CCcC
Q psy2973         316 DRLY  319 (514)
Q Consensus       316 ~~~f  319 (514)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8765

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.53  E-value=4.3e-15  Score=115.68  Aligned_cols=77  Identities=27%  Similarity=0.556  Sum_probs=42.3

Q ss_pred             cccc--cccccccCChHHHHHHHHhhcCCCCcccccccc--cccccCChhhHHHHhcccc-ccccc---ccccccCHHHH
Q psy2973         427 AWKC--EKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNE--CGKQYKWESFLQKHKKICT-TTCKS---CGKRYSSIYVL  498 (514)
Q Consensus       427 ~~~C--~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~-~~C~~---C~~~f~~~~~l  498 (514)
                      ||.|  +.|++.|.+...|..|+++|+++++   |.|+.  |+++|.+...|..|+++|+ |.|..   |++.|.+...|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~---~~C~~~~C~~~f~~~~~l~~H~~~h~~~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLP---YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCC---EECCSTTCCCEESSHHHHHHHHHHHHSEECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCC---eeCCCCCCcCccCCHHHHHHHHHHhCCCCCCCCCCCCCccCCHHHH
Confidence            3455  5555555555555555555555544   45555  5555555555555555554 55555   55555555555


Q ss_pred             HHhhhhhh
Q psy2973         499 RNHVKSCY  506 (514)
Q Consensus       499 ~~H~~~h~  506 (514)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            55555553

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.50  E-value=1.6e-14  Score=112.48  Aligned_cols=73  Identities=29%  Similarity=0.484  Sum_probs=34.6

Q ss_pred             CCCcccccccccHHHHHHHhcCCCcccccc--cccccCChHHHHHhhhhcccCCcccCCc---CCCcCCCHHHHHHHHHh
Q psy2973         257 PICGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSV---CDRLYKSDYLRRKHERS  331 (514)
Q Consensus       257 ~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~---C~~~f~~~~~l~~H~~~  331 (514)
                      +.|++.|.+...|..|+++|+++++|.|+.  |++.|.+...|..|+++|++   |.|+.   |++.|.+...|..|+++
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHh
Confidence            444444444444444444444444444444  44444444444444444444   44444   44444444444444444


Q ss_pred             c
Q psy2973         332 H  332 (514)
Q Consensus       332 h  332 (514)
                      |
T Consensus        84 h   84 (85)
T 2j7j_A           84 C   84 (85)
T ss_dssp             C
T ss_pred             c
Confidence            3

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=2.2e-14  Score=110.03  Aligned_cols=70  Identities=27%  Similarity=0.562  Sum_probs=41.6

Q ss_pred             CCcccccCC--CcccccccccHHHHHH-HhcCCCcccccc--cccccCChHHHHHhhhhcccCCcccCCcCCCcC
Q psy2973         250 DQGRFKCPI--CGKHIRHKQTFDDHMN-MHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLY  319 (514)
Q Consensus       250 ~~~~~~C~~--C~~~f~~~~~L~~H~~-~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  319 (514)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|.+...|..|+++|+++++|.|++|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            344555554  6666666666666665 455556666665  666666666666666666666666666666555

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=2e-14  Score=110.33  Aligned_cols=71  Identities=28%  Similarity=0.550  Sum_probs=41.8

Q ss_pred             CCCceeccC--CCcccccHHHHHHHHHHhhcCCCCeeccc--ccccccChhhhhhhhhhccCCcccccCCCcccc
Q psy2973         193 KIKRFKCEV--CPMKFHRQVSLKKHVEAVHLKLKPCKCEV--CGKSFSNNSTLKVHSTTHADQGRFKCPICGKHI  263 (514)
Q Consensus       193 ~~k~~~C~~--C~~~f~~~~~l~~H~~~~H~~~k~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f  263 (514)
                      ++++|.|..  |++.|.+...|..|++..|.++++|.|+.  |++.|.+...|..|+++|+++++|.|++|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            445566654  66666666666666533565566666655  666666666666666555555555555555555

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=5.4e-14  Score=107.36  Aligned_cols=69  Identities=29%  Similarity=0.588  Sum_probs=57.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      +...+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344556778888888888888888888888888888888888888888888888888888888888876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.45  E-value=9.8e-15  Score=123.60  Aligned_cols=56  Identities=20%  Similarity=0.465  Sum_probs=23.3

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      |++++||.|++|++.|.....|..|+++|  ++||.|+.|++.|.....|..|+++|+
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            33334444444444444444444444443  334444444444444444444444443

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.45  E-value=1.2e-14  Score=123.05  Aligned_cols=113  Identities=19%  Similarity=0.308  Sum_probs=88.3

Q ss_pred             cccCCCccccCccccccc--ChHHHHhhHhcccCCCCceeccCCCcccc------cHHHHHHHHHHhhcCCCCeeccccc
Q psy2973         161 FSFGENKFKCQFCPMWFE--QRGKRRKHVNGVHLKIKRFKCEVCPMKFH------RQVSLKKHVEAVHLKLKPCKCEVCG  232 (514)
Q Consensus       161 ~~~~~~~~~C~~C~~~f~--~~~~l~~H~~~~h~~~k~~~C~~C~~~f~------~~~~l~~H~~~~H~~~k~~~C~~C~  232 (514)
                      .+.|.++|.|...+....  ....+..|.  ....++.+.|++|.+.|.      ....|..|+  .|.+++||.|++|+
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~--l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C~   81 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQ--LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLCL   81 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHHTT--SCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTTC
T ss_pred             hcccccccccccCCeeeeecHHhhhcccc--CChhhCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCCC
Confidence            455788898877655432  222222222  233457788988877665      666677775  48889999999999


Q ss_pred             ccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCC
Q psy2973         233 KSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD  279 (514)
Q Consensus       233 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  279 (514)
                      +.|.....|..|+++|  ++||.|++|++.|.....|..|+++|++.
T Consensus        82 k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           82 MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            9999999999999998  88999999999999999999999999875

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=5.3e-14  Score=112.88  Aligned_cols=80  Identities=21%  Similarity=0.336  Sum_probs=65.0

Q ss_pred             cccChhhhhhhhhhccCCcccccCCCccccc-ccccHHHHHHHhcC-CCcccccccccccCChHHHHHhhhhcccCCccc
Q psy2973         234 SFSNNSTLKVHSTTHADQGRFKCPICGKHIR-HKQTFDDHMNMHSG-DVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK  311 (514)
Q Consensus       234 ~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  311 (514)
                      ++.....+..|+++|.++++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|++++|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4555667788888888888888888888888 88888888888887 888888888888888888888888888887755


Q ss_pred             CC
Q psy2973         312 CS  313 (514)
Q Consensus       312 C~  313 (514)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=7.5e-14  Score=108.89  Aligned_cols=78  Identities=22%  Similarity=0.385  Sum_probs=43.0

Q ss_pred             HhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCC---CCeecccccccccChhhhhhhhhhccCCcccccCCCc
Q psy2973         184 RKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL---KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICG  260 (514)
Q Consensus       184 ~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~---k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~  260 (514)
                      ..|++ +|.++++|.|.+|++.|.....|..|++..|...   ++|.|..|++.|.....|..|+++|++++++.|..|+
T Consensus         4 ~~H~~-~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TCCST-TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             ccccc-eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            34554 4556666666666666666666666654333332   4555555555555555555555555555555555555


Q ss_pred             cc
Q psy2973         261 KH  262 (514)
Q Consensus       261 ~~  262 (514)
                      ..
T Consensus        83 ~~   84 (86)
T 1x6h_A           83 PS   84 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.2e-13  Score=105.50  Aligned_cols=65  Identities=34%  Similarity=0.623  Sum_probs=40.0

Q ss_pred             cCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCccccc
Q psy2973         191 HLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKC  256 (514)
Q Consensus       191 h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  256 (514)
                      +.++++|.|++|++.|.....|..|+ +.|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHR-RTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHH-TTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHH-HHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44556666666666666666666665 456666666666666666666666666666666666555

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.4e-13  Score=108.35  Aligned_cols=71  Identities=23%  Similarity=0.398  Sum_probs=36.1

Q ss_pred             ccChhhhhhhhhhccCCcccccCCCcccc-cccccHHHHHHHhcCCCcccccccccccCChHHHHHh-hhhccc
Q psy2973         235 FSNNSTLKVHSTTHADQGRFKCPICGKHI-RHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHH-LFVHSS  306 (514)
Q Consensus       235 f~~~~~L~~H~~~h~~~~~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~H~~  306 (514)
                      |.....|..|++.|.++++|.|++|++.| .+...|..|+++| ++++|.|.+|++.|.....|..| +++|++
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            34444444455555455555555555555 4555555555555 55555555555555555555555 444443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=1.4e-13  Score=110.46  Aligned_cols=73  Identities=16%  Similarity=0.265  Sum_probs=49.4

Q ss_pred             cCChHHHHHHHHhhcCCCCcccccccccccccC-ChhhHHHHhcccc-----cccccccccccCHHHHHHhhhhhhCCCC
Q psy2973         437 FVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYK-WESFLQKHKKICT-----TTCKSCGKRYSSIYVLRNHVKSCYGQQK  510 (514)
Q Consensus       437 F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~-~~~~L~~H~~~h~-----~~C~~C~~~f~~~~~l~~H~~~h~ge~~  510 (514)
                      +.....+..|+++|.++++   |.|++|++.|. +...|..|+++|+     |.|.+|++.|.++..|..|+++|+|++|
T Consensus         6 ~~~~~~~~~h~~~h~~~~~---~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGE---AVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSC---CCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCC---cCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3444455566666666555   56666666666 6666666665553     6777888888888888888888888887


Q ss_pred             CC
Q psy2973         511 NL  512 (514)
Q Consensus       511 ~~  512 (514)
                      +.
T Consensus        83 ~~   84 (98)
T 2gqj_A           83 SD   84 (98)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.7e-13  Score=108.03  Aligned_cols=69  Identities=19%  Similarity=0.294  Sum_probs=43.6

Q ss_pred             cCCCccccCcccccccChHHHHhhHhccc---CCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccc
Q psy2973         163 FGENKFKCQFCPMWFEQRGKRRKHVNGVH---LKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVC  231 (514)
Q Consensus       163 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~h---~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C  231 (514)
                      .|++||.|+.|++.|.+...|..|++.+|   .++++|.|++|++.|.....|..|++++|++++||.|.++
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            46666666666666666666666665345   4456666666666666666666663356666666666653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.38  E-value=3.3e-13  Score=102.06  Aligned_cols=63  Identities=29%  Similarity=0.554  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTS  310 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  310 (514)
                      +.++++|.|..|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            344555666666666666666666666666666666666666666666666666666665554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=3.3e-13  Score=108.31  Aligned_cols=69  Identities=17%  Similarity=0.294  Sum_probs=47.5

Q ss_pred             CCCCceeccCCCcccccHHHHHHHHHHhh---cCCCCeecccccccccChhhhhhh-hhhccCCcccccCCCc
Q psy2973         192 LKIKRFKCEVCPMKFHRQVSLKKHVEAVH---LKLKPCKCEVCGKSFSNNSTLKVH-STTHADQGRFKCPICG  260 (514)
Q Consensus       192 ~~~k~~~C~~C~~~f~~~~~l~~H~~~~H---~~~k~~~C~~C~~~f~~~~~L~~H-~~~h~~~~~~~C~~C~  260 (514)
                      .+++||.|+.|++.|.....|..|++..|   .+++||.|.+||+.|...+.|..| +++|++++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            45677777777777777777777764456   456677777777777777777777 6677777777776543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.36  E-value=2.9e-14  Score=107.49  Aligned_cols=72  Identities=19%  Similarity=0.215  Sum_probs=64.1

Q ss_pred             ChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         237 NNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       237 ~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      +...|..|+++|.++++|.|++|++.|.....|..       +++|.|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            35678889999999999999999999998888876       6889999999999999999999999999999999887

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.36  E-value=3.8e-13  Score=101.73  Aligned_cols=62  Identities=32%  Similarity=0.718  Sum_probs=31.5

Q ss_pred             cCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcc
Q psy2973         221 LKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKY  282 (514)
Q Consensus       221 ~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  282 (514)
                      .++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34444555555555555555555555555555555555555555555555555555555443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=4.7e-13  Score=100.64  Aligned_cols=63  Identities=29%  Similarity=0.596  Sum_probs=40.0

Q ss_pred             hhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccC
Q psy2973         245 STTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       245 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      .++|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|+++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            445556666666666666666666666666666666666666666666666666666666554

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=7.1e-13  Score=101.07  Aligned_cols=67  Identities=24%  Similarity=0.465  Sum_probs=51.8

Q ss_pred             hhhhhhhhccCCcccccCCCcccccccccHHHHHH-HhcCC-CcccccccccccCChHHHHHhhhhccc
Q psy2973         240 TLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMN-MHSGD-VKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       240 ~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      .|.+|+++|.++++|.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.+...|..|++++++
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            45678888888888888888888888888888886 55553 678888888888888888888876543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=7.5e-13  Score=98.88  Aligned_cols=62  Identities=19%  Similarity=0.386  Sum_probs=32.4

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFT  309 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~  309 (514)
                      |.++++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+++|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            33444555555555555555555555555555555555555555555555555555555443

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=8.6e-13  Score=105.15  Aligned_cols=71  Identities=21%  Similarity=0.329  Sum_probs=37.6

Q ss_pred             cccHHHHHHHHHHhhcCCCCeecccccccc-cChhhhhhhhhhccCCcccccCCCcccccccccHHHH-HHHhcC
Q psy2973         206 FHRQVSLKKHVEAVHLKLKPCKCEVCGKSF-SNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDH-MNMHSG  278 (514)
Q Consensus       206 f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  278 (514)
                      |.....|..|+ ..|.++++|.|+.|++.| .....|..|+++| ++++|.|.+|++.|.....|..| +++|++
T Consensus        16 ~~~~~~~~~~~-~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           16 YAAGSLEEQWY-LEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SCTTCHHHHHH-HHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCchHHHHHH-HHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            34444444443 344445555555555555 5555555555555 55555555555555555555555 555544

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9.6e-13  Score=98.29  Aligned_cols=62  Identities=27%  Similarity=0.569  Sum_probs=33.3

Q ss_pred             hcCCCCeecccccccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCc
Q psy2973         220 HLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVK  281 (514)
Q Consensus       220 H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  281 (514)
                      |.++++|.|.+|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|++++|
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            34445555555555555555555555555555555555555555555555555555555444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.31  E-value=1e-12  Score=101.62  Aligned_cols=63  Identities=25%  Similarity=0.572  Sum_probs=48.1

Q ss_pred             hhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhh-hcccC
Q psy2973         245 STTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLF-VHSSE  307 (514)
Q Consensus       245 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  307 (514)
                      +..+...++|.|++|++.|.....|..|+++|++++||.|++|++.|.....|..|++ .|+++
T Consensus        20 ~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            3455566778888888888888888888888888888888888888888888888864 56655

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.1e-12  Score=98.68  Aligned_cols=60  Identities=40%  Similarity=0.644  Sum_probs=31.1

Q ss_pred             ccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccC
Q psy2973         190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHAD  250 (514)
Q Consensus       190 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~  250 (514)
                      +|.++++|.|++|++.|.....|..|+ +.|.++++|.|++|++.|.....|..|+++|++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQ-RVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHH-HGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHH-HhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            344555555555555555555555554 345555555555555555555555555555443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=2e-12  Score=92.21  Aligned_cols=54  Identities=33%  Similarity=0.679  Sum_probs=26.3

Q ss_pred             cccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcc
Q psy2973         252 GRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       252 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      ++|.|++|++.|.+...|..|+++|+++++|.|+.|++.|.....|..|+++|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            344555555555555555555555555555555555555555555555554443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.26  E-value=7.1e-12  Score=96.86  Aligned_cols=63  Identities=22%  Similarity=0.516  Sum_probs=50.8

Q ss_pred             cccCCCccccCcccccccChHHHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCC
Q psy2973         161 FSFGENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLK  224 (514)
Q Consensus       161 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k  224 (514)
                      .+.+.++|.|++|++.|.+...|..|++ +|.+++||.|++|++.|.....|..|+++.|+++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3446677888888888888888888887 68888888888888888888888888877787653

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.4e-12  Score=96.03  Aligned_cols=23  Identities=30%  Similarity=0.686  Sum_probs=8.7

Q ss_pred             CcccccccccccCChHHHHHhhh
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      ++|.|+.|++.|.+...|..|++
T Consensus        39 ~~~~C~~C~k~f~~~~~L~~H~~   61 (66)
T 2drp_A           39 KVYPCPFCFKEFTRKDNMTAHVK   61 (66)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHH
Confidence            33333333333333333333333

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.25  E-value=4.3e-12  Score=90.42  Aligned_cols=56  Identities=27%  Similarity=0.591  Sum_probs=36.9

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCC
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      ||.|++|++.|.+...|..|+++|+++++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            45666666666666666666666666666666666666666666666666666543

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=2.4e-12  Score=94.80  Aligned_cols=59  Identities=22%  Similarity=0.517  Sum_probs=30.6

Q ss_pred             hhcCCCCeecccccccccChhhhhhhhhh-c-cCCcccccCCCcccccccccHHHHHHHhc
Q psy2973         219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTT-H-ADQGRFKCPICGKHIRHKQTFDDHMNMHS  277 (514)
Q Consensus       219 ~H~~~k~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  277 (514)
                      .|.++++|.|+.|++.|.+...|..|++. | .++++|.|+.|++.|.....|..|+++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            44455555555555555555555555554 3 24455555555555555555555555544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=7.6e-12  Score=99.42  Aligned_cols=70  Identities=24%  Similarity=0.418  Sum_probs=59.1

Q ss_pred             CcccccccccccCChHHHHHHHHh-hcCCCCcccccccccccccCChhhHHHHhcccccccccccccccCHHHHHHhhhh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKV-HEKNRNMLDSSCNECGKQYKWESFLQKHKKICTTTCKSCGKRYSSIYVLRNHVKS  504 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~-H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~C~~C~~~f~~~~~l~~H~~~  504 (514)
                      ..|.|..|++.|.+...|..|+++ |.++++...|.|                   ..|.|.+|++.|.+...|..|+++
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-------------------~~~~C~~C~k~f~~~~~L~~H~~~   84 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVNHIRV   84 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-------------------CCTTCSSTTCCCSSHHHHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccce-------------------eccCCCCCCcccCCHHHHHHHHHh
Confidence            447899999999999999999998 887766433333                   238899999999999999999999


Q ss_pred             hhCCCCCCCC
Q psy2973         505 CYGQQKNLSH  514 (514)
Q Consensus       505 h~ge~~~~c~  514 (514)
                      |+|++||+|+
T Consensus        85 H~~~k~~~C~   94 (95)
T 2ej4_A           85 HTGEKSGPSS   94 (95)
T ss_dssp             HHTCCCCSSC
T ss_pred             cCCCCCCCCC
Confidence            9999999995

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.24  E-value=3.3e-12  Score=91.01  Aligned_cols=53  Identities=21%  Similarity=0.379  Sum_probs=36.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHHhccc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKIC  481 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  481 (514)
                      +||.|++|++.|.+...|..|+++|++++|   |.|+.|++.|.+...|..|+++|
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---~~C~~C~~~f~~~~~l~~H~~~h   55 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKP---YKCEFCEYAAAQKTSLRYHLERH   55 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCC---EECSSSSCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCC---cCCCCCcchhCCHHHHHHHHHHh
Confidence            567777777777777777777777777766   66777777777666666666654

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=2.9e-12  Score=96.51  Aligned_cols=67  Identities=22%  Similarity=0.510  Sum_probs=56.6

Q ss_pred             HHHHHHHhhcCCCCCCccccc--ccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHHhcccc
Q psy2973         411 RLNYHILTKHSGPNYKAWKCE--KCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKICT  482 (514)
Q Consensus       411 ~L~~H~~~~H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  482 (514)
                      .|..|+...|.++  ++|.|+  .|++.|.+...|..|+++|+++++   |.|++||+.|.+...|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~--~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~---~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKP---FQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCC--CCEECSSTTBCCEESSHHHHHHHHHHHHCCCC---EECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCC--CccCCcCCCCCCccCCHHHHHHHHHhhCCCCC---eECCCCCchhCCHHHHHHHHHhcC
Confidence            4555666677776  899997  599999999999999999999988   899999999999999999998874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=1.3e-11  Score=93.92  Aligned_cols=59  Identities=24%  Similarity=0.491  Sum_probs=29.9

Q ss_pred             ccCCCCceeccCCCcccccHHHHHHHHHHhhcCC-CCeecccccccccChhhhhhhhhhc
Q psy2973         190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKL-KPCKCEVCGKSFSNNSTLKVHSTTH  248 (514)
Q Consensus       190 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~-k~~~C~~C~~~f~~~~~L~~H~~~h  248 (514)
                      +|.++++|.|++|++.|.....|..|++..|.++ ++|.|++|++.|.....|..|++.+
T Consensus         9 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   68 (77)
T 2ct1_A            9 THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ   68 (77)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHh
Confidence            4555555555555555555555555543344442 4555555555555555555555543

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=3e-13  Score=101.78  Aligned_cols=69  Identities=22%  Similarity=0.345  Sum_probs=41.0

Q ss_pred             HHHhhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccCCcccccCCC
Q psy2973         182 KRRKHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC  259 (514)
Q Consensus       182 ~l~~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  259 (514)
                      .|..|++ +|.++++|.|++|++.|.....|..        +++|.|+.|++.|.....|..|+++|+++++|.|++|
T Consensus         5 ~l~~H~~-~h~~~~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCC-CCCCCSEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHH-HhCCCCCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            3445554 4556666666666666655555443        4556666666666666666666666666666666655

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.20  E-value=1.5e-11  Score=87.58  Aligned_cols=56  Identities=29%  Similarity=0.600  Sum_probs=36.0

Q ss_pred             CccccccccccCChHHHHHHHHhhcCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         396 KLNCVHCQAIFTNKQRLNYHILTKHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       396 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      ||.|.+|++.|.+...|..|++ .|.++  ++|.|+.|++.|.+...|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~-~h~~~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIR-THTDV--RPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHH-HTSSC--CCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHH-hcCCC--CCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            3556666666666666666665 35544  66777777777777777777777776653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.4e-11  Score=94.04  Aligned_cols=63  Identities=24%  Similarity=0.546  Sum_probs=37.3

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcC---CCcccccccccccCChHHHHHhhh-hcccCCcc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSG---DVKYTCTYCEKSFLYKKSLKHHLF-VHSSEFTS  310 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~---~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~  310 (514)
                      |.++++|.|.+|++.|.....|..|+++|++   +++|.|.+|++.|.....|..|++ .|.++.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~   68 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA   68 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            4455566666666666666666666666653   556666666666666666666663 44444443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=1.9e-11  Score=87.97  Aligned_cols=54  Identities=24%  Similarity=0.653  Sum_probs=32.7

Q ss_pred             ccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhh-hhccc
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHL-FVHSS  306 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~-~~H~~  306 (514)
                      ||.|++|++.|.....|..|+++|+++++|.|+.|++.|.+...|..|+ +.|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            4566666666666666666666666666666666666666666666664 35544

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.1e-11  Score=87.80  Aligned_cols=48  Identities=27%  Similarity=0.720  Sum_probs=24.6

Q ss_pred             cccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHH
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKH  477 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H  477 (514)
                      ||.|+.|++.|.+...|..|+++|+++++   |.|+.|++.|.+...|..|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~---~~C~~C~~~f~~~~~l~~H   49 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKP---YPCGLCNRAFTRRDLLIRH   49 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCS---EECTTTCCEESSHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCC---ccCCCCCCccCCHHHHHHH
Confidence            45555555555555555555555555444   4454444444444444444

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.3e-11  Score=94.12  Aligned_cols=54  Identities=26%  Similarity=0.549  Sum_probs=28.3

Q ss_pred             cCCCCceeccCCCcccccHHHHHHHHHHhhcC---CCCeecccccccccChhhhhhhh
Q psy2973         191 HLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLK---LKPCKCEVCGKSFSNNSTLKVHS  245 (514)
Q Consensus       191 h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~---~k~~~C~~C~~~f~~~~~L~~H~  245 (514)
                      |+++++|.|.+|++.|.....|..|+ +.|.+   +++|.|.+|++.|.....|..|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~-~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHH-HHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHH-HHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            44555555555555555555555554 33432   44555555555555555555555

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=3.7e-11  Score=90.27  Aligned_cols=65  Identities=31%  Similarity=0.651  Sum_probs=41.2

Q ss_pred             HHhhHhcccCCCCceecc--CCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhc
Q psy2973         183 RRKHVNGVHLKIKRFKCE--VCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTH  248 (514)
Q Consensus       183 l~~H~~~~h~~~k~~~C~--~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h  248 (514)
                      |..|+..+|.++++|.|+  .|++.|.....|..|+ +.|.++++|.|++|++.|.....|..|+++|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHH-HhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            444555566666667775  4777776666666665 4566666666666666666666666666655

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=5.1e-11  Score=94.56  Aligned_cols=61  Identities=26%  Similarity=0.353  Sum_probs=47.6

Q ss_pred             ccccCCCcccccccccHHHHHHH-hcCCCc--------ccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNM-HSGDVK--------YTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|.|+.|++.|.....|..|+++ |.++++        |.|..|++.|.....|..|+++|++++||.|+
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46677777777777777777776 766666        78888888888888888888888888888875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.4e-10  Score=85.31  Aligned_cols=52  Identities=19%  Similarity=0.339  Sum_probs=21.8

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecc-cccccccChhhhhhhhhhc
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCE-VCGKSFSNNSTLKVHSTTH  248 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~-~C~~~f~~~~~L~~H~~~h  248 (514)
                      +++|.|+.|++.|. ...|..|++ . .+++||.|+ .|++.|...+.|..|+++|
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~-~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQY-Q-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHH-H-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCeeccccCCccC-HHHHHHHHH-H-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            34444444444444 444444432 2 344444444 4444444444444444443

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.1e-10  Score=85.88  Aligned_cols=53  Identities=21%  Similarity=0.454  Sum_probs=24.3

Q ss_pred             CCCeecccccccccChhhhhhhhhhccCCcccccC-CCcccccccccHHHHHHHhc
Q psy2973         223 LKPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCP-ICGKHIRHKQTFDDHMNMHS  277 (514)
Q Consensus       223 ~k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~  277 (514)
                      ++||.|..|++.|. .+.|..|+++ .+++||.|+ .|++.|.....|..|+++|.
T Consensus         8 ~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc   61 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSC   61 (66)
T ss_dssp             CCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTS
T ss_pred             CCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhc
Confidence            34444444444444 4444444444 444444444 44444444444444444443

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=1.1e-10  Score=78.91  Aligned_cols=44  Identities=27%  Similarity=0.357  Sum_probs=21.9

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            34444444555555555555555555555555555555555444

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.99  E-value=1.8e-10  Score=77.95  Aligned_cols=45  Identities=16%  Similarity=0.372  Sum_probs=25.5

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            355555555555555555555555555555555555555555554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.99  E-value=1.1e-10  Score=78.91  Aligned_cols=44  Identities=27%  Similarity=0.335  Sum_probs=21.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            34444444444444444444444445555444444444444443

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.99  E-value=1.1e-10  Score=78.98  Aligned_cols=44  Identities=27%  Similarity=0.304  Sum_probs=22.3

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=77.57  Aligned_cols=45  Identities=20%  Similarity=0.383  Sum_probs=25.8

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            355555555555555555555555555555555555555555554

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=78.26  Aligned_cols=44  Identities=18%  Similarity=0.370  Sum_probs=21.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            44444444444444444444444444444444444444444443

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.2e-10  Score=78.74  Aligned_cols=44  Identities=25%  Similarity=0.356  Sum_probs=21.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444445555555555555555555555554455554444

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=77.96  Aligned_cols=44  Identities=18%  Similarity=0.355  Sum_probs=24.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555554

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.8e-10  Score=77.89  Aligned_cols=45  Identities=18%  Similarity=0.400  Sum_probs=36.5

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.1e-10  Score=79.02  Aligned_cols=44  Identities=23%  Similarity=0.528  Sum_probs=23.3

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=77.98  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            366777777777777777777777777777777777777777766

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.98  E-value=1.1e-10  Score=78.96  Aligned_cols=45  Identities=29%  Similarity=0.382  Sum_probs=40.5

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      +|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.4e-10  Score=78.51  Aligned_cols=44  Identities=30%  Similarity=0.410  Sum_probs=21.8

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444455555555555555555555555555555555443

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.8e-10  Score=77.82  Aligned_cols=45  Identities=31%  Similarity=0.356  Sum_probs=37.1

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=78.56  Aligned_cols=44  Identities=27%  Similarity=0.352  Sum_probs=22.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.5e-10  Score=78.39  Aligned_cols=45  Identities=13%  Similarity=0.304  Sum_probs=24.3

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            345555555555555555555555555555555555555555544

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.98  E-value=2.6e-10  Score=77.14  Aligned_cols=44  Identities=20%  Similarity=0.454  Sum_probs=28.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=77.60  Aligned_cols=44  Identities=20%  Similarity=0.427  Sum_probs=23.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.98  E-value=1.9e-10  Score=77.83  Aligned_cols=45  Identities=16%  Similarity=0.291  Sum_probs=35.9

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477777788888888888888888888888888888888888776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=2.1e-10  Score=77.59  Aligned_cols=44  Identities=14%  Similarity=0.307  Sum_probs=21.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44444444455555555555555555555555544444444443

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.3e-10  Score=78.53  Aligned_cols=45  Identities=24%  Similarity=0.399  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999886

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=77.87  Aligned_cols=44  Identities=18%  Similarity=0.246  Sum_probs=21.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444455555555555555555555555555555555555443

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.2e-10  Score=78.83  Aligned_cols=44  Identities=16%  Similarity=0.391  Sum_probs=21.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44444444445555555555444444444444444444444443

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=77.69  Aligned_cols=44  Identities=18%  Similarity=0.381  Sum_probs=25.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            55555555555555555555555555555555555555555554

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=78.38  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=21.3

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            34444444444444444444444445555444444444444444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.97  E-value=1.2e-10  Score=78.83  Aligned_cols=44  Identities=20%  Similarity=0.481  Sum_probs=22.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555443

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=78.55  Aligned_cols=45  Identities=29%  Similarity=0.446  Sum_probs=40.2

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=77.83  Aligned_cols=44  Identities=30%  Similarity=0.298  Sum_probs=22.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444445555555555555555555555555555555555444

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=78.44  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=21.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            34444444444444444444444444444444444444444443

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.5e-10  Score=78.29  Aligned_cols=44  Identities=16%  Similarity=0.359  Sum_probs=22.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555554444

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.9e-10  Score=77.76  Aligned_cols=45  Identities=18%  Similarity=0.383  Sum_probs=36.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.3e-10  Score=78.54  Aligned_cols=45  Identities=31%  Similarity=0.455  Sum_probs=40.4

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.6e-10  Score=78.14  Aligned_cols=44  Identities=30%  Similarity=0.386  Sum_probs=23.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=78.00  Aligned_cols=44  Identities=25%  Similarity=0.360  Sum_probs=21.8

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444555555555555555555555555555555555444

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=2.1e-10  Score=76.72  Aligned_cols=44  Identities=32%  Similarity=0.384  Sum_probs=32.3

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45667777777777777777777777777777777777777766

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.1e-10  Score=78.93  Aligned_cols=45  Identities=27%  Similarity=0.349  Sum_probs=40.9

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=77.88  Aligned_cols=44  Identities=16%  Similarity=0.326  Sum_probs=24.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.1e-10  Score=77.49  Aligned_cols=44  Identities=20%  Similarity=0.271  Sum_probs=24.3

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=77.69  Aligned_cols=44  Identities=32%  Similarity=0.383  Sum_probs=23.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=77.70  Aligned_cols=43  Identities=21%  Similarity=0.512  Sum_probs=19.4

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4444444444444444444444444444444444444444443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=77.50  Aligned_cols=44  Identities=18%  Similarity=0.447  Sum_probs=23.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.2e-10  Score=77.41  Aligned_cols=45  Identities=31%  Similarity=0.456  Sum_probs=34.9

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366777777778888888888888888888877777777877776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.97  E-value=1.8e-10  Score=77.83  Aligned_cols=45  Identities=16%  Similarity=0.215  Sum_probs=34.2

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777766

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.97  E-value=2e-10  Score=77.62  Aligned_cols=45  Identities=27%  Similarity=0.416  Sum_probs=34.1

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.7e-10  Score=78.01  Aligned_cols=45  Identities=31%  Similarity=0.442  Sum_probs=41.5

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=1.8e-10  Score=77.87  Aligned_cols=45  Identities=24%  Similarity=0.302  Sum_probs=35.4

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      +|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777888888888888888888888888888888888776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=77.46  Aligned_cols=45  Identities=16%  Similarity=0.310  Sum_probs=36.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477778888888888888888888888888888888888888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=78.06  Aligned_cols=44  Identities=27%  Similarity=0.418  Sum_probs=22.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            34444444555555555555555555555555555555555444

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.3e-10  Score=78.67  Aligned_cols=45  Identities=29%  Similarity=0.408  Sum_probs=41.0

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=77.73  Aligned_cols=44  Identities=16%  Similarity=0.441  Sum_probs=22.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555444

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=78.82  Aligned_cols=45  Identities=29%  Similarity=0.346  Sum_probs=40.8

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=77.40  Aligned_cols=45  Identities=18%  Similarity=0.412  Sum_probs=37.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477788888888888888888888888888888888888888876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=78.93  Aligned_cols=45  Identities=29%  Similarity=0.373  Sum_probs=41.4

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999887

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.96  E-value=1.5e-10  Score=78.27  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=41.1

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377889999999999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.8e-10  Score=77.83  Aligned_cols=44  Identities=30%  Similarity=0.495  Sum_probs=21.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            33444444444555555555555555555445544445544444

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.1e-10  Score=77.57  Aligned_cols=45  Identities=22%  Similarity=0.471  Sum_probs=35.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            467777777788888888888888888888888888888888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=77.21  Aligned_cols=44  Identities=18%  Similarity=0.436  Sum_probs=24.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=78.94  Aligned_cols=45  Identities=29%  Similarity=0.423  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.2e-10  Score=77.43  Aligned_cols=45  Identities=22%  Similarity=0.436  Sum_probs=34.3

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777777777777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=77.76  Aligned_cols=44  Identities=18%  Similarity=0.391  Sum_probs=24.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.96  E-value=2e-10  Score=77.66  Aligned_cols=44  Identities=34%  Similarity=0.442  Sum_probs=21.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.+...|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444445555555555555555555545544445554444

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.1e-10  Score=78.94  Aligned_cols=45  Identities=31%  Similarity=0.334  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.+.+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=1.5e-10  Score=78.27  Aligned_cols=44  Identities=34%  Similarity=0.393  Sum_probs=21.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444444444555555555555555555545544445544443

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.2e-10  Score=78.75  Aligned_cols=44  Identities=20%  Similarity=0.442  Sum_probs=22.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555444

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=77.50  Aligned_cols=45  Identities=20%  Similarity=0.411  Sum_probs=34.0

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=76.78  Aligned_cols=45  Identities=20%  Similarity=0.374  Sum_probs=34.9

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366777777778888888888888888888888877778887776

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=77.25  Aligned_cols=45  Identities=20%  Similarity=0.452  Sum_probs=33.3

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777777777777766

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.4e-10  Score=78.37  Aligned_cols=45  Identities=27%  Similarity=0.366  Sum_probs=40.8

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.8e-10  Score=76.90  Aligned_cols=45  Identities=18%  Similarity=0.381  Sum_probs=35.3

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777777888888888888888888888888888888888776

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.9e-10  Score=77.78  Aligned_cols=44  Identities=30%  Similarity=0.370  Sum_probs=23.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            44445555555555555555555555555555555555555544

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.94  E-value=2.7e-10  Score=76.98  Aligned_cols=45  Identities=20%  Similarity=0.392  Sum_probs=34.2

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777777777777766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.6e-10  Score=77.07  Aligned_cols=44  Identities=18%  Similarity=0.405  Sum_probs=23.8

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555544

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2e-10  Score=77.70  Aligned_cols=44  Identities=27%  Similarity=0.369  Sum_probs=30.1

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666667777777777777777777666666667766665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.4e-10  Score=77.24  Aligned_cols=45  Identities=16%  Similarity=0.253  Sum_probs=35.0

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777778888888888888888888888877778877766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2e-10  Score=77.66  Aligned_cols=45  Identities=27%  Similarity=0.342  Sum_probs=41.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.9e-10  Score=76.82  Aligned_cols=45  Identities=18%  Similarity=0.361  Sum_probs=33.3

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.2e-10  Score=78.72  Aligned_cols=45  Identities=27%  Similarity=0.353  Sum_probs=41.8

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.1e-10  Score=77.58  Aligned_cols=44  Identities=18%  Similarity=0.398  Sum_probs=23.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=76.61  Aligned_cols=45  Identities=24%  Similarity=0.371  Sum_probs=34.7

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            366777777778888888888877788888777777777877776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.5e-10  Score=77.16  Aligned_cols=44  Identities=23%  Similarity=0.369  Sum_probs=22.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555444

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.1e-10  Score=77.57  Aligned_cols=43  Identities=28%  Similarity=0.417  Sum_probs=21.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3444444455555555555555555555555555555555443

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.5e-10  Score=76.47  Aligned_cols=44  Identities=25%  Similarity=0.330  Sum_probs=35.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|.+|++.|.+...|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56777888888888888888888888888888888888888776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.93  E-value=3.7e-10  Score=76.35  Aligned_cols=44  Identities=20%  Similarity=0.291  Sum_probs=19.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            33444444444444444444444444444444444444444433

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.93  E-value=3.1e-10  Score=76.72  Aligned_cols=45  Identities=33%  Similarity=0.342  Sum_probs=41.2

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.2e-10  Score=77.46  Aligned_cols=45  Identities=31%  Similarity=0.373  Sum_probs=41.7

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.4e-10  Score=77.23  Aligned_cols=44  Identities=14%  Similarity=0.271  Sum_probs=24.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45555555555555555555555555555555555555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.9e-10  Score=76.19  Aligned_cols=44  Identities=27%  Similarity=0.309  Sum_probs=33.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.1e-10  Score=76.09  Aligned_cols=44  Identities=23%  Similarity=0.218  Sum_probs=33.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777766

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.5e-10  Score=76.43  Aligned_cols=45  Identities=16%  Similarity=0.409  Sum_probs=34.6

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777778888888888877778888777777777777764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.91  E-value=7.8e-10  Score=82.67  Aligned_cols=54  Identities=20%  Similarity=0.562  Sum_probs=47.6

Q ss_pred             CCcccccc--cccccCChHHHHHHHHhhcCCCCcccccccc--cccccCChhhHHHHhccc
Q psy2973         425 YKAWKCEK--CDMRFVTNKNLKRHMKVHEKNRNMLDSSCNE--CGKQYKWESFLQKHKKIC  481 (514)
Q Consensus       425 ~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h  481 (514)
                      .++|.|..  |++.|.....|..|+++|+++++   |.|.+  |++.|.+...|..|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~---~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKP---FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCS---EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCC---ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            37899988  99999999999999999999888   88965  999999999999998875

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.2e-10  Score=76.61  Aligned_cols=45  Identities=22%  Similarity=0.413  Sum_probs=33.1

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            366677777777777777777777777777777777777777766

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.3e-10  Score=75.99  Aligned_cols=44  Identities=20%  Similarity=0.419  Sum_probs=23.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=76.39  Aligned_cols=44  Identities=30%  Similarity=0.394  Sum_probs=22.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhh-hcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLF-VHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C  315 (514)
                      |+++|.++++|.|++|++.|.....|..|++ +|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3444455555555555555555555555555 5555555555444

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.90  E-value=7.7e-10  Score=82.73  Aligned_cols=57  Identities=25%  Similarity=0.596  Sum_probs=38.3

Q ss_pred             ccCCcccccCC--CcccccccccHHHHHHHhcCCCcccccc--cccccCChHHHHHhhhhc
Q psy2973         248 HADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       248 h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H  304 (514)
                      ....++|.|..  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34556667766  7777777777777777777777777754  777777777777776654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.9e-10  Score=76.90  Aligned_cols=44  Identities=30%  Similarity=0.380  Sum_probs=40.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.4e-10  Score=75.44  Aligned_cols=45  Identities=16%  Similarity=0.335  Sum_probs=35.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHH-HhcCCCccccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMN-MHSGDVKYTCTYC  287 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~~~C~~C  287 (514)
                      .|+++|.++++|.|++|++.|.....|..|++ +|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            46777777788888888888888888888887 7888888888776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.2e-09  Score=76.70  Aligned_cols=43  Identities=26%  Similarity=0.457  Sum_probs=39.3

Q ss_pred             CCcccccccccccCChHHHHHHHH-hhcCCCCcccccccccccccCC
Q psy2973         425 YKAWKCEKCDMRFVTNKNLKRHMK-VHEKNRNMLDSSCNECGKQYKW  470 (514)
Q Consensus       425 ~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~~~~~~C~~C~~~f~~  470 (514)
                      .+||.|++|++.|.....|..|++ +|.+++|   |.|++|+++|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~---~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERP---HKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCC---CCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCC---ccCCCCCCCCCC
Confidence            389999999999999999999997 8999988   899999999976

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.9e-10  Score=75.72  Aligned_cols=43  Identities=23%  Similarity=0.535  Sum_probs=24.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4555555555555555555555555555555555555555554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8.9e-10  Score=74.40  Aligned_cols=44  Identities=30%  Similarity=0.403  Sum_probs=32.9

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.6e-09  Score=76.05  Aligned_cols=46  Identities=35%  Similarity=0.439  Sum_probs=25.8

Q ss_pred             hcCCCcccccccccccCChHHHHHhhh-hcccCCcccCCcCCCcCCC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLF-VHSSEFTSKCSVCDRLYKS  321 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~f~~  321 (514)
                      |.++++|.|++|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            344555555555555555555555554 5555555555555555543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.86  E-value=1.2e-10  Score=84.52  Aligned_cols=53  Identities=17%  Similarity=0.501  Sum_probs=34.2

Q ss_pred             hhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHH
Q psy2973         241 LKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKS  296 (514)
Q Consensus       241 L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~  296 (514)
                      |..|+++|.+++||.|+.|++.|.....|.   ++|++++||.|+.|++.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            455666666666666666666666665554   56666666666666666665544

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.84  E-value=8.4e-10  Score=72.87  Aligned_cols=40  Identities=30%  Similarity=0.453  Sum_probs=20.1

Q ss_pred             HHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         273 MNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       273 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      +++|+++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            3444444555555555555555555555555555555544

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.1e-10  Score=74.58  Aligned_cols=42  Identities=29%  Similarity=0.404  Sum_probs=20.8

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            344444444555555555555555555555555555555443

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.7e-10  Score=74.43  Aligned_cols=42  Identities=17%  Similarity=0.438  Sum_probs=20.5

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            444444444455555544444444444444444444444443

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=1.2e-09  Score=76.65  Aligned_cols=50  Identities=16%  Similarity=0.262  Sum_probs=27.4

Q ss_pred             ccccChhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcc
Q psy2973         233 KSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKY  282 (514)
Q Consensus       233 ~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  282 (514)
                      +.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            34455555555555555555555555555555555555555555555544

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.83  E-value=7.8e-10  Score=77.61  Aligned_cols=52  Identities=15%  Similarity=0.235  Sum_probs=47.9

Q ss_pred             cccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCccc
Q psy2973         260 GKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSK  311 (514)
Q Consensus       260 ~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  311 (514)
                      ++.|.....|..|+++|+++++|.|..|++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4678889999999999999999999999999999999999999999998874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.9e-10  Score=74.17  Aligned_cols=42  Identities=19%  Similarity=0.507  Sum_probs=20.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            444444444455555555554444444444444444444443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.3e-10  Score=74.27  Aligned_cols=42  Identities=19%  Similarity=0.453  Sum_probs=20.8

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444455555555555555555555555555444444443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.83  E-value=1.3e-09  Score=73.51  Aligned_cols=42  Identities=19%  Similarity=0.468  Sum_probs=22.3

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.4e-09  Score=73.42  Aligned_cols=44  Identities=18%  Similarity=0.406  Sum_probs=35.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47777888888888888888888888888888888888888764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=73.21  Aligned_cols=44  Identities=30%  Similarity=0.400  Sum_probs=35.5

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36777888888888888888888888888888888888888764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=73.30  Aligned_cols=43  Identities=16%  Similarity=0.452  Sum_probs=24.5

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3555555555555555555555555555555555555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=74.12  Aligned_cols=42  Identities=31%  Similarity=0.469  Sum_probs=20.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444445555555555555555555455444444443

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.82  E-value=1.5e-09  Score=71.58  Aligned_cols=42  Identities=21%  Similarity=0.481  Sum_probs=30.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            556677777777777777777777777777777777777764

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.5e-10  Score=74.22  Aligned_cols=42  Identities=33%  Similarity=0.511  Sum_probs=20.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            344444444455555555555555555555555545555443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=72.03  Aligned_cols=39  Identities=23%  Similarity=0.468  Sum_probs=18.7

Q ss_pred             HHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       274 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      ++|+++++|.|++|++.|.+...|..|+++|++++||.|
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            344444444444444444444444444444444444444

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=9.7e-10  Score=74.23  Aligned_cols=42  Identities=21%  Similarity=0.419  Sum_probs=23.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=73.26  Aligned_cols=42  Identities=24%  Similarity=0.483  Sum_probs=22.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=73.73  Aligned_cols=42  Identities=29%  Similarity=0.415  Sum_probs=20.7

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            344444444555555555555555555555555555555443

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.82  E-value=9.4e-10  Score=74.30  Aligned_cols=44  Identities=27%  Similarity=0.407  Sum_probs=39.6

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999874

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=72.98  Aligned_cols=44  Identities=30%  Similarity=0.401  Sum_probs=35.2

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.2e-09  Score=73.64  Aligned_cols=42  Identities=29%  Similarity=0.400  Sum_probs=20.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            334444444444444444444444444444444444444443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.7e-09  Score=72.95  Aligned_cols=44  Identities=32%  Similarity=0.480  Sum_probs=35.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36777888888888888888888888888888888888888764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=73.48  Aligned_cols=42  Identities=31%  Similarity=0.411  Sum_probs=21.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344445555555555555555555555555555555555544

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.3e-10  Score=74.51  Aligned_cols=44  Identities=32%  Similarity=0.417  Sum_probs=39.6

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999874

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=73.58  Aligned_cols=42  Identities=33%  Similarity=0.456  Sum_probs=23.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344555555555555555555555555555555555555554

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.7e-09  Score=73.03  Aligned_cols=44  Identities=32%  Similarity=0.368  Sum_probs=34.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36677778888888888888888888888888888888887763

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=73.55  Aligned_cols=42  Identities=29%  Similarity=0.471  Sum_probs=21.1

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444455555555555555555555555555555555543

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=73.61  Aligned_cols=42  Identities=29%  Similarity=0.411  Sum_probs=20.8

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|+.|++.|.+...|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344444444555555555555555555555555555555443

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=73.59  Aligned_cols=42  Identities=21%  Similarity=0.485  Sum_probs=20.4

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            444444444444444444444444444444444444444443

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.4e-09  Score=73.36  Aligned_cols=44  Identities=20%  Similarity=0.431  Sum_probs=34.2

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777777788888888888888888888888888888887763

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.6e-09  Score=73.16  Aligned_cols=44  Identities=18%  Similarity=0.425  Sum_probs=36.0

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888863

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.8e-10  Score=74.41  Aligned_cols=44  Identities=30%  Similarity=0.437  Sum_probs=39.3

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999874

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.3e-09  Score=72.72  Aligned_cols=41  Identities=27%  Similarity=0.395  Sum_probs=23.4

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            44555555555555555555555555555555555555555

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=73.47  Aligned_cols=42  Identities=36%  Similarity=0.540  Sum_probs=23.4

Q ss_pred             HHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       274 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      ++|+++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            345555555555555555555555555555555555555554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.3e-09  Score=70.68  Aligned_cols=42  Identities=14%  Similarity=0.320  Sum_probs=32.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777778888888888888888888888888888887773

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=73.01  Aligned_cols=44  Identities=18%  Similarity=0.418  Sum_probs=33.9

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46777777777888888888888888888888887777777763

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.1e-09  Score=73.95  Aligned_cols=42  Identities=31%  Similarity=0.470  Sum_probs=20.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            344444444455555555555555555555555544454443

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=2.1e-09  Score=72.47  Aligned_cols=42  Identities=21%  Similarity=0.434  Sum_probs=22.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=72.86  Aligned_cols=44  Identities=18%  Similarity=0.473  Sum_probs=34.9

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46777778888888888888888888888888888888888763

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.6e-09  Score=73.01  Aligned_cols=44  Identities=18%  Similarity=0.338  Sum_probs=34.1

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46777777778888888888888888888888888878877763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=72.67  Aligned_cols=44  Identities=23%  Similarity=0.433  Sum_probs=35.8

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47777888888888888888888888888888888888888863

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.5e-09  Score=72.34  Aligned_cols=41  Identities=27%  Similarity=0.351  Sum_probs=19.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            33444444444444444444444444444444444444444

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=73.19  Aligned_cols=42  Identities=14%  Similarity=0.388  Sum_probs=20.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444444455555555555555555555555555544444443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2e-09  Score=72.61  Aligned_cols=43  Identities=21%  Similarity=0.431  Sum_probs=25.6

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      +|+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            3555555566666666666666666666666666666666554

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=71.91  Aligned_cols=41  Identities=17%  Similarity=0.393  Sum_probs=21.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.5e-09  Score=73.29  Aligned_cols=42  Identities=31%  Similarity=0.435  Sum_probs=22.6

Q ss_pred             HHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         274 NMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       274 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      ++|.++++|.|.+|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344555555555555555555555555555555555555544

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=74.05  Aligned_cols=42  Identities=14%  Similarity=0.450  Sum_probs=22.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.6e-09  Score=73.15  Aligned_cols=44  Identities=27%  Similarity=0.391  Sum_probs=39.0

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36788899999999999999999999999999999999999874

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.1e-09  Score=72.21  Aligned_cols=41  Identities=32%  Similarity=0.462  Sum_probs=22.1

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34445555555555555555555555555555555555544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=72.70  Aligned_cols=44  Identities=20%  Similarity=0.451  Sum_probs=35.9

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTY  286 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~  286 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888888888888888888888888888888888888863

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.79  E-value=3.5e-09  Score=72.18  Aligned_cols=42  Identities=21%  Similarity=0.263  Sum_probs=26.8

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDR  317 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  317 (514)
                      |.++++|.|.+|++.|.....|..|+++|++++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            345566666666666666666666666666666666666654

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.9e-09  Score=72.75  Aligned_cols=44  Identities=32%  Similarity=0.532  Sum_probs=34.4

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677778888888888888888888888888888888887763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=73.72  Aligned_cols=42  Identities=19%  Similarity=0.521  Sum_probs=22.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555555555555555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=2e-09  Score=71.80  Aligned_cols=43  Identities=21%  Similarity=0.380  Sum_probs=36.1

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4777888888888888888888888888888888888888874

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2.3e-09  Score=71.51  Aligned_cols=41  Identities=17%  Similarity=0.391  Sum_probs=22.8

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.+++||.|++|++.|.....|..|+++|+++++|.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            45555555555555555555555555555555555555554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.2e-09  Score=72.36  Aligned_cols=44  Identities=30%  Similarity=0.479  Sum_probs=34.0

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36677777788888888888888888888888888888887763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=72.69  Aligned_cols=43  Identities=28%  Similarity=0.474  Sum_probs=32.5

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      |+++|+++++|.|..|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6667777777777777777777777777777777777777763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2e-09  Score=72.65  Aligned_cols=43  Identities=19%  Similarity=0.425  Sum_probs=26.8

Q ss_pred             hhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         245 STTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       245 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455566666666666666666666666666666666666655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=3e-09  Score=71.39  Aligned_cols=41  Identities=22%  Similarity=0.424  Sum_probs=22.3

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCD  316 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~  316 (514)
                      |+++++|.|.+|++.|.....|..|+++|+++++|.|+.||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            44555555555555555555555555555555555555553

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=72.25  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=38.7

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999885

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=72.65  Aligned_cols=43  Identities=19%  Similarity=0.485  Sum_probs=33.7

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677777777888888888888888888888888877888776

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.7e-09  Score=71.99  Aligned_cols=42  Identities=33%  Similarity=0.472  Sum_probs=34.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667778888888888888888888888888888888888876

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.3e-09  Score=72.76  Aligned_cols=43  Identities=16%  Similarity=0.379  Sum_probs=38.9

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      +|+++|++++||.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778899999999999999999999999999999999999884

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.6e-09  Score=73.09  Aligned_cols=42  Identities=29%  Similarity=0.475  Sum_probs=22.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555553

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=4.1e-09  Score=70.67  Aligned_cols=42  Identities=26%  Similarity=0.583  Sum_probs=38.6

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCCCCcccccccccc
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECG  465 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~  465 (514)
                      .|+++  +||.|++|++.|.....|..|+++|+++++   |.|+.||
T Consensus         4 ~h~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~---~~C~~cg   45 (45)
T 2epq_A            4 GSSGE--KPYSCPVCGLRFKRKDRMSYHVRSHDGSVG---KSGPSSG   45 (45)
T ss_dssp             CCSSC--CSSEETTTTEECSCHHHHHHHHHHHSCCCC---CCCCCCC
T ss_pred             CcCCC--CCCcCCCCCcccCCHHHHHHHHHHccCCCC---CCCcCCC
Confidence            56766  899999999999999999999999999998   8999996

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.2e-09  Score=73.81  Aligned_cols=43  Identities=30%  Similarity=0.431  Sum_probs=38.9

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      +|+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999999999986

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=71.22  Aligned_cols=41  Identities=22%  Similarity=0.484  Sum_probs=29.4

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66667777777777777777777777777777777777765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.3e-09  Score=71.49  Aligned_cols=41  Identities=12%  Similarity=0.360  Sum_probs=19.4

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            44444444444444444444444444444444444444444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=72.23  Aligned_cols=42  Identities=24%  Similarity=0.529  Sum_probs=30.9

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            566677777777777777777777777777777777777775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2e-09  Score=71.01  Aligned_cols=40  Identities=28%  Similarity=0.482  Sum_probs=20.3

Q ss_pred             HHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         273 MNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       273 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      +++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            3 SGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3444445555555555555555555555555555555444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=72.21  Aligned_cols=41  Identities=20%  Similarity=0.512  Sum_probs=19.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444444

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.2e-09  Score=71.64  Aligned_cols=43  Identities=19%  Similarity=0.370  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|+++|+++++|.|+.|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778899999999999999999999999999999999999885

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.9e-09  Score=72.76  Aligned_cols=42  Identities=17%  Similarity=0.330  Sum_probs=21.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcC-CCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSG-DVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            44455555555555555555555555555555555 5555543

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.2e-09  Score=72.45  Aligned_cols=43  Identities=14%  Similarity=0.305  Sum_probs=29.9

Q ss_pred             hhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         245 STTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       245 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      +++|.++++|.|++|++.|.....|..|+++|++++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4556666777777777777777777777777777777777665

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.3e-09  Score=71.51  Aligned_cols=43  Identities=21%  Similarity=0.430  Sum_probs=33.2

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4677777777788888888888888888888777777777774

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.75  E-value=1.4e-09  Score=78.77  Aligned_cols=55  Identities=15%  Similarity=0.295  Sum_probs=37.8

Q ss_pred             hhHhcccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhh
Q psy2973         185 KHVNGVHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVH  244 (514)
Q Consensus       185 ~H~~~~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H  244 (514)
                      .|++ +|.++++|.|+.|++.|.....|.    ..|.+++||.|+.|++.|.....+..+
T Consensus         4 ~h~~-~H~~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            4 TDER-DSTNRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCSS-SCCSSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hHHH-HcCCCCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCcccccc
Confidence            4555 577777777777777777766664    467777777777777777766655443

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=4.1e-09  Score=71.07  Aligned_cols=42  Identities=36%  Similarity=0.488  Sum_probs=33.2

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777788888888888888888888888888888888775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=71.87  Aligned_cols=43  Identities=16%  Similarity=0.441  Sum_probs=34.0

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677777778888888888888888888888888888888775

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.2e-09  Score=70.00  Aligned_cols=41  Identities=29%  Similarity=0.639  Sum_probs=30.8

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56677777777777777777777777777777777777766

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.9e-09  Score=72.75  Aligned_cols=42  Identities=21%  Similarity=0.488  Sum_probs=21.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            444455555555555555555555555555555555555443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=4.7e-09  Score=71.51  Aligned_cols=35  Identities=26%  Similarity=0.562  Sum_probs=12.7

Q ss_pred             CeecccccccccChhhhhhhhhhccCCcccccCCC
Q psy2973         225 PCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPIC  259 (514)
Q Consensus       225 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  259 (514)
                      +|.|.+|++.|.....|..|+++|+++++|.|++|
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS   46 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCC
Confidence            33333333333333333333333333333333333

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.74  E-value=4e-09  Score=69.50  Aligned_cols=41  Identities=17%  Similarity=0.299  Sum_probs=20.5

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            34444445555555555555555555555555555555444

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.7e-09  Score=72.00  Aligned_cols=43  Identities=33%  Similarity=0.441  Sum_probs=34.9

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|+++|.++++|.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677788888888888888888888888888888888888876

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.5e-09  Score=71.42  Aligned_cols=42  Identities=24%  Similarity=0.370  Sum_probs=31.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhccc-CCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS-EFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~-~~~~~C~  313 (514)
                      |+++|++++||.|..|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            56667777777777777777777777777777777 7777775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.73  E-value=2.4e-09  Score=70.54  Aligned_cols=41  Identities=29%  Similarity=0.357  Sum_probs=37.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788899999999999999999999999999999999887

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.9e-09  Score=71.15  Aligned_cols=41  Identities=20%  Similarity=0.443  Sum_probs=21.7

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.1e-09  Score=70.06  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=29.6

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++|++++||.|..|++.|.+...|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            55667777777777777777777777777777777777765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.9e-09  Score=71.80  Aligned_cols=42  Identities=14%  Similarity=0.309  Sum_probs=22.2

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555543

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.6e-09  Score=73.12  Aligned_cols=43  Identities=26%  Similarity=0.349  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999986

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=5.7e-09  Score=69.57  Aligned_cols=41  Identities=24%  Similarity=0.506  Sum_probs=22.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            44455555555555555555555555555555555555554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.7e-09  Score=70.51  Aligned_cols=42  Identities=19%  Similarity=0.245  Sum_probs=37.0

Q ss_pred             HHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         272 HMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       272 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788889999999999999999999999999999998884

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.4e-09  Score=70.68  Aligned_cols=41  Identities=17%  Similarity=0.408  Sum_probs=21.1

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            44455555555555555555555555555555555555544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=2.1e-09  Score=71.76  Aligned_cols=43  Identities=19%  Similarity=0.318  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      .|+++|+++++|.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788899999999999999999999999999999999999984

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=2e-09  Score=81.15  Aligned_cols=67  Identities=24%  Similarity=0.306  Sum_probs=51.0

Q ss_pred             hhhhhhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccC
Q psy2973         238 NSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       238 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      +..|..|+++|.+.+++.|..|++.|. ...|..|+ .|.++++|.|+.|++.|. ...|..|+.+|.++
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            356777877788888888888888884 77788887 777788888888888766 47777888777665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.4e-09  Score=69.35  Aligned_cols=41  Identities=20%  Similarity=0.355  Sum_probs=20.6

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            44445555555555555555555555555555555544443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=6.9e-09  Score=70.56  Aligned_cols=42  Identities=26%  Similarity=0.305  Sum_probs=22.4

Q ss_pred             HHhcCCCccccc--ccccccCChHHHHHhhhhcccCCcccCCcC
Q psy2973         274 NMHSGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSEFTSKCSVC  315 (514)
Q Consensus       274 ~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C  315 (514)
                      ++|+++++|.|.  .|++.|.....|..|+++|++++||.|+.|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555555554  455555555555555555555555555544

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.7e-09  Score=68.67  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=32.5

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            366777777888888888888888888888888887777766

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.3e-08  Score=68.62  Aligned_cols=38  Identities=21%  Similarity=0.447  Sum_probs=17.5

Q ss_pred             hccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         247 THADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       247 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      +|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCC
Confidence            34444444444444444444444444444444444444

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1e-08  Score=69.02  Aligned_cols=42  Identities=26%  Similarity=0.332  Sum_probs=37.5

Q ss_pred             HHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCc
Q psy2973         273 MNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSV  314 (514)
Q Consensus       273 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  314 (514)
                      +++|+++++|.|.+|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467888999999999999999999999999999999999864

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.64  E-value=1.3e-08  Score=67.48  Aligned_cols=38  Identities=16%  Similarity=0.323  Sum_probs=18.3

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      |.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            44444444444444444444444444444444444443

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=7.4e-09  Score=69.37  Aligned_cols=39  Identities=33%  Similarity=0.518  Sum_probs=21.5

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      +|+++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555554

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.9e-09  Score=69.74  Aligned_cols=44  Identities=18%  Similarity=0.304  Sum_probs=28.4

Q ss_pred             hhhhccCCcccccC--CCcccccccccHHHHHHHhcCCCccccccc
Q psy2973         244 HSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDVKYTCTYC  287 (514)
Q Consensus       244 H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C  287 (514)
                      |.++|.++++|.|.  .|++.|.....|..|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666665  666666666666666666666666666655

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=1e-08  Score=68.67  Aligned_cols=41  Identities=27%  Similarity=0.566  Sum_probs=26.1

Q ss_pred             hhhccCCcccccCCCcccccccccHHHHHHHhcCCCccccc
Q psy2973         245 STTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCT  285 (514)
Q Consensus       245 ~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  285 (514)
                      .++|.++++|.|.+|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            44556666666666666666666666666666666666664

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.62  E-value=1.9e-08  Score=66.63  Aligned_cols=39  Identities=28%  Similarity=0.428  Sum_probs=27.3

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhcccCCcccCC
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCS  313 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  313 (514)
                      +|+++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456666777777777777777777777777777777765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=2.1e-08  Score=65.58  Aligned_cols=38  Identities=37%  Similarity=0.447  Sum_probs=22.1

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      +|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            34555556666666666666666666656655555554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2.6e-08  Score=65.15  Aligned_cols=37  Identities=27%  Similarity=0.545  Sum_probs=18.7

Q ss_pred             ccCCcccccCCCcccccccccHHHHHHHhcCCCcccc
Q psy2973         248 HADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTC  284 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C  284 (514)
                      |.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4444455555555555555555555555555555544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=5.1e-09  Score=81.47  Aligned_cols=60  Identities=13%  Similarity=0.331  Sum_probs=44.4

Q ss_pred             hhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         243 VHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       243 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      .|.++|.++++|.|++|++.|.....|..|+++|++++||.|..|.    ....|..|.+.|.+
T Consensus        15 ~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           15 LGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3445677888888888888888888888888888888888887654    34556667777665

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.2e-09  Score=78.42  Aligned_cols=66  Identities=17%  Similarity=0.134  Sum_probs=55.7

Q ss_pred             cccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCCcccCCcCCCcCCCHHHHHHHHHhcCC
Q psy2973         266 KQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKCSVCDRLYKSDYLRRKHERSHSS  334 (514)
Q Consensus       266 ~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  334 (514)
                      +..|..|+++|.+.+++.|..|++.|. ...|..|+ .|.+++|+.|+.|++.|. ...|..|++++.+
T Consensus         2 ~~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            2 SSGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             chHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            356778888899999999999999994 88999999 888999999999999877 4788888887763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.38  E-value=1.8e-07  Score=60.25  Aligned_cols=37  Identities=24%  Similarity=0.475  Sum_probs=22.8

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccCCcccC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEFTSKC  312 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C  312 (514)
                      |+++++|.|.+|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.34  E-value=2.9e-07  Score=59.23  Aligned_cols=34  Identities=29%  Similarity=0.672  Sum_probs=30.2

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      |+++  +||.|++|++.|...+.|..|+++|++++|
T Consensus         1 h~~~--k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            1 XWPP--RSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             -CCS--SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCC--CceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            3444  899999999999999999999999999988

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.6e-07  Score=59.61  Aligned_cols=34  Identities=32%  Similarity=0.569  Sum_probs=18.0

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhcccCC
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      +|+++++|.|..|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            3445555555555555555555555555555443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.33  E-value=1.7e-07  Score=59.46  Aligned_cols=30  Identities=27%  Similarity=0.456  Sum_probs=11.9

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhc
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      +|++++||.|+.|++.|.....|..|+++|
T Consensus         5 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             cCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            333333344444444444444444443333

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.31  E-value=3.7e-07  Score=56.98  Aligned_cols=34  Identities=24%  Similarity=0.531  Sum_probs=29.8

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      |.++  +||.|++|++.|...+.|..|+++|++++|
T Consensus         2 h~~~--k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGS--SGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCC--CSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCC--CCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5555  899999999999999999999999998764

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.29  E-value=3.1e-07  Score=58.25  Aligned_cols=36  Identities=17%  Similarity=0.326  Sum_probs=27.5

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcCC
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGD  279 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  279 (514)
                      |+++|.+++||.|+.|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            667777777788888888888888888887777653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.9e-07  Score=58.35  Aligned_cols=35  Identities=17%  Similarity=0.574  Sum_probs=22.2

Q ss_pred             hhccCCcccccCCCcccccccccHHHHHHHhcCCC
Q psy2973         246 TTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDV  280 (514)
Q Consensus       246 ~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  280 (514)
                      ++|.++++|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            34556666666666666666666666666666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.28  E-value=4.9e-07  Score=56.46  Aligned_cols=34  Identities=35%  Similarity=0.644  Sum_probs=29.7

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      |.++  +||.|.+|++.|...+.|..|+++|++++|
T Consensus         2 H~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGK--RPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCC--SCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCC--cCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5555  899999999999999999999999988764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.28  E-value=5.1e-07  Score=55.74  Aligned_cols=30  Identities=27%  Similarity=0.662  Sum_probs=27.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      +||.|+.|++.|...+.|..|+++|+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            479999999999999999999999999887

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.25  E-value=4.9e-07  Score=55.79  Aligned_cols=32  Identities=19%  Similarity=0.259  Sum_probs=29.3

Q ss_pred             ccccccccccccCHHHHHHhhhhhhCCCCCCC
Q psy2973         482 TTTCKSCGKRYSSIYVLRNHVKSCYGQQKNLS  513 (514)
Q Consensus       482 ~~~C~~C~~~f~~~~~l~~H~~~h~ge~~~~c  513 (514)
                      +|.|++||+.|.....|..|+++|+|++||.+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            37899999999999999999999999999963

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.24  E-value=2.5e-07  Score=71.81  Aligned_cols=56  Identities=14%  Similarity=0.259  Sum_probs=42.5

Q ss_pred             ccCCCCceeccCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhhhhhhhhccC
Q psy2973         190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTLKVHSTTHAD  250 (514)
Q Consensus       190 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L~~H~~~h~~  250 (514)
                      +|.++++|.|++|++.|.....|..|+ +.|.+++||.|..|.    ....|..|.+.|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~-~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHH-HHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHH-HHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            577788888888888888888888886 578888888886654    45667777777755

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.22  E-value=5.7e-07  Score=56.10  Aligned_cols=33  Identities=27%  Similarity=0.503  Sum_probs=16.9

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccCC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      |+++++|.|..|++.|.....|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            344455555555555555555555555554443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.22  E-value=6.4e-07  Score=55.94  Aligned_cols=33  Identities=30%  Similarity=0.589  Sum_probs=18.3

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccCC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      |+++++|.|.+|++.|.....|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555555555555555555555555555543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=9.1e-07  Score=63.65  Aligned_cols=38  Identities=26%  Similarity=0.410  Sum_probs=21.7

Q ss_pred             cCCCcccccc--cccccCChHHHHHhh-hhcccCCcccCCc
Q psy2973         277 SGDVKYTCTY--CEKSFLYKKSLKHHL-FVHSSEFTSKCSV  314 (514)
Q Consensus       277 ~~~~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~~~~C~~  314 (514)
                      ++++||.|..  |++.|...+.|..|+ ++|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3555666643  666666666666665 3566666665543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=1.1e-06  Score=56.14  Aligned_cols=32  Identities=31%  Similarity=0.459  Sum_probs=27.7

Q ss_pred             cCCCCCCcccccc--cccccCChHHHHHHHHhhcCC
Q psy2973         420 HSGPNYKAWKCEK--CDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       420 H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +.++  +||+|+.  |+++|...+.|..|+++|+++
T Consensus         4 ~~ge--kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSG--ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCC--CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCC--CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4445  8999986  999999999999999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=1.5e-06  Score=62.49  Aligned_cols=36  Identities=17%  Similarity=0.162  Sum_probs=19.2

Q ss_pred             CCCccccCc--ccccccChHHHHhhHhcccCCCCceec
Q psy2973         164 GENKFKCQF--CPMWFEQRGKRRKHVNGVHLKIKRFKC  199 (514)
Q Consensus       164 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~k~~~C  199 (514)
                      |++||+|..  |++.|...+.|..|++++|++++||.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            555555543  555555555555554334555555555

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.6e-06  Score=54.36  Aligned_cols=34  Identities=26%  Similarity=0.551  Sum_probs=29.2

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      .|.++  +||.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSG--KPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCC--CSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCC--CCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            45665  89999999999999999999999998763

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.6e-06  Score=54.43  Aligned_cols=33  Identities=27%  Similarity=0.528  Sum_probs=27.7

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      |.++  +||.|.+|++.|...+.|..|+++|++++
T Consensus         4 h~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSG--LLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCC--CCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCC--CCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            5555  88999999999999999999999988753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.09  E-value=1.9e-06  Score=54.09  Aligned_cols=34  Identities=32%  Similarity=0.595  Sum_probs=28.7

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      .|.++  +||.|++|++.|...+.|..|+++|++++
T Consensus         3 ~h~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSG--KPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCC--CSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCC--CCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35555  88999999999999999999999998753

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.08  E-value=2.4e-06  Score=53.51  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=28.9

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      .|.++  ++|.|++|++.|.....|..|+++|++++
T Consensus         3 ~h~~~--~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSG--KTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCC--SSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCC--CCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            35555  88999999999999999999999998763

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=2.7e-06  Score=53.36  Aligned_cols=33  Identities=27%  Similarity=0.649  Sum_probs=28.3

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      |.++  +||.|+.|++.|.....|..|+++|++++
T Consensus         4 ~~~~--k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSG--KIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCC--CCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCC--CCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4444  89999999999999999999999998763

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=2.1e-06  Score=54.30  Aligned_cols=34  Identities=38%  Similarity=0.696  Sum_probs=28.8

Q ss_pred             hcCCCCCCcccccccccccCCh-HHHHHHHHhhcCCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTN-KNLKRHMKVHEKNR  454 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~-~~L~~H~~~H~~~~  454 (514)
                      .|.++  +||.|+.|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~--k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSG--RAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCC--CCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCC--CCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46666  889999999999998 99999999998753

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.1e-06  Score=55.67  Aligned_cols=25  Identities=36%  Similarity=0.566  Sum_probs=10.8

Q ss_pred             hcCCCcccccccccccCChHHHHHh
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHH  300 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H  300 (514)
                      |++++||.|+.|++.|.....|..|
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H   28 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRH   28 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHH
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHH
Confidence            3344444444444444444444444

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=2.2e-06  Score=54.72  Aligned_cols=29  Identities=31%  Similarity=0.494  Sum_probs=13.2

Q ss_pred             CCCcccccc--cccccCChHHHHHhhhhccc
Q psy2973         278 GDVKYTCTY--CEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       278 ~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  306 (514)
                      +++||.|++  |++.|...+.|..|+++|++
T Consensus         6 gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            6 SGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            444444443  44444444444444444443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.02  E-value=2.1e-06  Score=54.69  Aligned_cols=34  Identities=26%  Similarity=0.432  Sum_probs=18.0

Q ss_pred             cCCCccccc--ccccccCChHHHHHhhhhcccCCcc
Q psy2973         277 SGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSEFTS  310 (514)
Q Consensus       277 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~  310 (514)
                      +++++|.|.  .|++.|...+.|..|+++|+++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            344555555  3555555555555555555555444

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=2.2e-06  Score=53.82  Aligned_cols=31  Identities=29%  Similarity=0.649  Sum_probs=16.5

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      |++++||.|.+|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            4445555555555555555555555555544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.01  E-value=3.5e-06  Score=49.73  Aligned_cols=28  Identities=32%  Similarity=0.777  Sum_probs=23.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888775

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.01  E-value=2.5e-06  Score=50.43  Aligned_cols=28  Identities=29%  Similarity=0.706  Sum_probs=23.3

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            4688888888888888888888888765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.4e-06  Score=54.01  Aligned_cols=30  Identities=20%  Similarity=0.454  Sum_probs=12.7

Q ss_pred             ccCCcccccCCCccccccc-ccHHHHHHHhc
Q psy2973         248 HADQGRFKCPICGKHIRHK-QTFDDHMNMHS  277 (514)
Q Consensus       248 h~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~  277 (514)
                      |.++++|.|+.|++.|... ..|..|+++|+
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            3334444444444444444 44444444443

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.4e-06  Score=53.62  Aligned_cols=31  Identities=32%  Similarity=0.528  Sum_probs=14.3

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      |.+++||.|.+|++.|.....|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            3344444444444444444444444444443

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.00  E-value=2.5e-06  Score=53.63  Aligned_cols=25  Identities=20%  Similarity=0.441  Sum_probs=14.7

Q ss_pred             cCCCcccccccccccCChHHHHHhh
Q psy2973         277 SGDVKYTCTYCEKSFLYKKSLKHHL  301 (514)
Q Consensus       277 ~~~~~~~C~~C~~~f~~~~~L~~H~  301 (514)
                      .+++||.|++|+++|...+.|..|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            3555566666666666666666665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.3e-06  Score=54.20  Aligned_cols=33  Identities=18%  Similarity=0.374  Sum_probs=19.7

Q ss_pred             hhccCCcccccCCCcccccccccHHHH-HHHhcC
Q psy2973         246 TTHADQGRFKCPICGKHIRHKQTFDDH-MNMHSG  278 (514)
Q Consensus       246 ~~h~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  278 (514)
                      ++|.+++||.|+.|++.|.....|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            345556666666666666666666666 555554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.00  E-value=3.7e-06  Score=53.47  Aligned_cols=34  Identities=29%  Similarity=0.524  Sum_probs=30.1

Q ss_pred             cCCCCCCccccc--ccccccCChHHHHHHHHhhcCCCC
Q psy2973         420 HSGPNYKAWKCE--KCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       420 H~~~~~k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      |+++  +||.|.  .|++.|...+.|..|+++|+++++
T Consensus         1 H~~~--k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            1 MSDD--KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             CTTC--CCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCC--cceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            3455  899999  599999999999999999999887

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.99  E-value=2.1e-06  Score=54.00  Aligned_cols=23  Identities=39%  Similarity=0.632  Sum_probs=9.4

Q ss_pred             CCCeecccccccccChhhhhhhh
Q psy2973         223 LKPCKCEVCGKSFSNNSTLKVHS  245 (514)
Q Consensus       223 ~k~~~C~~C~~~f~~~~~L~~H~  245 (514)
                      ++||.|++|+++|...+.|..|+
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH
T ss_pred             ccCeECCCCCCccCCHhHccCcC
Confidence            34444444444444444444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=2.7e-06  Score=53.33  Aligned_cols=29  Identities=31%  Similarity=0.498  Sum_probs=12.5

Q ss_pred             cCCCcccccccccccCChHHHHHhhhhcc
Q psy2973         277 SGDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       277 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      .++++|.|..|++.|.....|..|+++|+
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            5 SSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            33444444444444444444444444443

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.98  E-value=3.5e-06  Score=56.65  Aligned_cols=40  Identities=18%  Similarity=0.317  Sum_probs=29.2

Q ss_pred             hhhhhhhccCCcccccC--CCcccccccccHHHHHHHhcCCC
Q psy2973         241 LKVHSTTHADQGRFKCP--ICGKHIRHKQTFDDHMNMHSGDV  280 (514)
Q Consensus       241 L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  280 (514)
                      +..|...|.+++||.|.  .|++.|...+.|..|+++|++++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            44455667778888884  68888888888888888877653

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.97  E-value=4.1e-06  Score=49.78  Aligned_cols=29  Identities=31%  Similarity=0.737  Sum_probs=24.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            46888889999988888999988888765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3.9e-06  Score=52.55  Aligned_cols=30  Identities=33%  Similarity=0.587  Sum_probs=13.2

Q ss_pred             cCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         277 SGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       277 ~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      .++++|.|++|++.|.....|..|+++|++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            334444444444444444444444444433

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.96  E-value=5.5e-07  Score=55.11  Aligned_cols=30  Identities=23%  Similarity=0.455  Sum_probs=27.9

Q ss_pred             ccccccccccccCHHHHHHhhhhhhCCCCC
Q psy2973         482 TTTCKSCGKRYSSIYVLRNHVKSCYGQQKN  511 (514)
Q Consensus       482 ~~~C~~C~~~f~~~~~l~~H~~~h~ge~~~  511 (514)
                      +|.|.+||+.|.....|..|+++|+|++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            378999999999999999999999999997

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=4e-06  Score=49.42  Aligned_cols=29  Identities=38%  Similarity=0.859  Sum_probs=24.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47889999999999999999999888753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.94  E-value=4.7e-06  Score=49.48  Aligned_cols=29  Identities=24%  Similarity=0.712  Sum_probs=25.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            67899999999999999999999888753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.93  E-value=4.2e-06  Score=56.55  Aligned_cols=34  Identities=21%  Similarity=0.482  Sum_probs=27.9

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHH-hhcCCCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMK-VHEKNRN  455 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~-~H~~~~~  455 (514)
                      |+++  +||.|.+|++.|.....|..|++ +|.++.+
T Consensus         2 Ht~~--kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRD--KPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTT--SCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCC--cCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5666  89999999999999999999999 9988765

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=4e-06  Score=49.38  Aligned_cols=29  Identities=41%  Similarity=0.756  Sum_probs=23.8

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|+.|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46888888888888888888888887753

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.92  E-value=5.6e-06  Score=52.32  Aligned_cols=33  Identities=21%  Similarity=0.454  Sum_probs=28.3

Q ss_pred             cCCCCCCcccccc--cccccCChHHHHHHHHhhcCCC
Q psy2973         420 HSGPNYKAWKCEK--CDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       420 H~~~~~k~~~C~~--C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      |+++  +||.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~--k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKK--KQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSC--CCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCC--CCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            5555  8999985  9999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.92  E-value=2e-06  Score=52.53  Aligned_cols=31  Identities=23%  Similarity=0.300  Sum_probs=20.9

Q ss_pred             CCeecccccccccChhhhhhhhhhccCCccc
Q psy2973         224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRF  254 (514)
Q Consensus       224 k~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  254 (514)
                      +||.|..|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            3566777777777777777777777666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.91  E-value=5.7e-06  Score=49.83  Aligned_cols=29  Identities=28%  Similarity=0.740  Sum_probs=23.5

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCE--KCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            468887  88888888888888888887753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.90  E-value=5.4e-06  Score=51.92  Aligned_cols=28  Identities=43%  Similarity=0.906  Sum_probs=12.4

Q ss_pred             CCCcccccccccccCChHHHHHhhhhcc
Q psy2973         278 GDVKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       278 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      ++++|.|+.|++.|.....|..|+++|+
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            6 SGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            3344444444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.12  E-value=1.6e-06  Score=51.40  Aligned_cols=28  Identities=25%  Similarity=0.540  Sum_probs=22.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4688888888888888888888888765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.89  E-value=4.9e-06  Score=56.21  Aligned_cols=32  Identities=28%  Similarity=0.547  Sum_probs=19.3

Q ss_pred             hcCCCcccccccccccCChHHHHHhhh-hcccC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLF-VHSSE  307 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~  307 (514)
                      |+++++|.|.+|++.|.....|..|++ +|.++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            555666666666666666666666666 56554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=6.4e-06  Score=48.20  Aligned_cols=27  Identities=26%  Similarity=0.733  Sum_probs=21.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||.|+.|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            578888888888888888888877753

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.86  E-value=6.4e-06  Score=47.66  Aligned_cols=26  Identities=38%  Similarity=0.851  Sum_probs=18.0

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      ||.|..|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777664

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=5.9e-06  Score=48.05  Aligned_cols=26  Identities=19%  Similarity=0.528  Sum_probs=18.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      +||.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            56777777777777777777777663

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.84  E-value=7.6e-06  Score=47.45  Aligned_cols=26  Identities=23%  Similarity=0.584  Sum_probs=20.0

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      +||.|+.|++.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            57788888888888888888877763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.83  E-value=1e-05  Score=49.03  Aligned_cols=29  Identities=38%  Similarity=0.848  Sum_probs=24.7

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCE--KCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            678898  89999999999999999888753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=1.5e-05  Score=57.72  Aligned_cols=30  Identities=20%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      +||.|..|++.|.....|..|+++|+++..
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            899999999999999999999999998753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=3e-06  Score=50.51  Aligned_cols=28  Identities=29%  Similarity=0.733  Sum_probs=23.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            6788888888888888888888888765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=2.3e-06  Score=57.52  Aligned_cols=39  Identities=21%  Similarity=0.391  Sum_probs=30.1

Q ss_pred             HHHHHHHhcCCCccccc--ccccccCChHHHHHhhhhcccC
Q psy2973         269 FDDHMNMHSGDVKYTCT--YCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       269 L~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      +..|+..|++++||.|.  .|++.|...+.|..|+++|+++
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34455668888888885  6888888888888888888765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.77  E-value=1e-05  Score=47.99  Aligned_cols=28  Identities=25%  Similarity=0.452  Sum_probs=24.0

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQK  510 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~~  510 (514)
                      |.|.+|++.|.....|..|+++|+|++|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            6788888888888889999988888765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.94  E-value=3.8e-06  Score=48.27  Aligned_cols=24  Identities=38%  Similarity=0.924  Sum_probs=15.8

Q ss_pred             cccccccccccCChHHHHHHHHhh
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.73  E-value=1.2e-05  Score=50.81  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=13.5

Q ss_pred             cCCCcccccc--cccccCChHHHHHhhhhccc
Q psy2973         277 SGDVKYTCTY--CEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       277 ~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~  306 (514)
                      +++++|.|.+  |++.|...+.|..|+++|++
T Consensus         4 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3444444442  44444444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.73  E-value=1.1e-05  Score=47.87  Aligned_cols=28  Identities=39%  Similarity=0.723  Sum_probs=20.2

Q ss_pred             CcccccccccccCChHHHHHH-HHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRH-MKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H-~~~H~~~  453 (514)
                      +||.|+.|++.|.+.+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            357777777777777777777 5677664

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.72  E-value=1.6e-05  Score=46.77  Aligned_cols=27  Identities=19%  Similarity=0.477  Sum_probs=21.5

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      |.|+.|++.|.....|..|+++|+|++
T Consensus         3 ~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            3 FVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888887764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=1.7e-05  Score=46.93  Aligned_cols=27  Identities=37%  Similarity=0.684  Sum_probs=13.4

Q ss_pred             CcccccccccccCChHHHHHhhhhccc
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      +||.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            344555555555555555555554443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.71  E-value=1.6e-05  Score=45.92  Aligned_cols=26  Identities=15%  Similarity=0.353  Sum_probs=17.3

Q ss_pred             cccccccccccCHHHHHHhhhhhhCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQ  508 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge  508 (514)
                      |.|..|++.|.+...|..|+++|+|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            56667777777777777777776654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.71  E-value=1.3e-05  Score=47.13  Aligned_cols=27  Identities=22%  Similarity=0.363  Sum_probs=20.8

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      |.|+.||+.|.....|..|+++|+|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            3 FACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             EECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            677778888888888888888877764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=1.6e-05  Score=46.72  Aligned_cols=27  Identities=26%  Similarity=0.721  Sum_probs=22.9

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      |.|..|++.|.....|..|+++|+|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            3 LKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             EECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             ccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            678888888888888888888888875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.63  E-value=2.2e-05  Score=45.49  Aligned_cols=25  Identities=24%  Similarity=0.495  Sum_probs=13.4

Q ss_pred             CcccccccccccCChHHHHHhhhhc
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.63  E-value=2.5e-05  Score=45.50  Aligned_cols=24  Identities=38%  Similarity=0.820  Sum_probs=11.5

Q ss_pred             cccccccccccCChHHHHHhhhhc
Q psy2973         281 KYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      +|.|+.|++.|.....|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTS
T ss_pred             CccCCCCCcccCCHHHHHHHHHhc
Confidence            444444444444444444444444

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.79  E-value=7.8e-06  Score=48.26  Aligned_cols=27  Identities=30%  Similarity=0.641  Sum_probs=20.5

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      |.|..||+.|.....|..|+++|+|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            3 CQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            667777777777777777877777764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.62  E-value=2.6e-05  Score=45.64  Aligned_cols=26  Identities=27%  Similarity=0.707  Sum_probs=12.6

Q ss_pred             ccccCCCcccccccccHHHHHHHhcC
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSG  278 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~  278 (514)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            34444455555444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.61  E-value=2.6e-05  Score=45.08  Aligned_cols=23  Identities=17%  Similarity=0.460  Sum_probs=9.5

Q ss_pred             cccccccccccCChHHHHHhhhh
Q psy2973         281 KYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      ||.|..||+.|.....|..|+++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCCcChhhCCHHHHHHHHHH
Confidence            34444444444444444444433

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.60  E-value=3.8e-05  Score=46.05  Aligned_cols=27  Identities=37%  Similarity=0.770  Sum_probs=14.1

Q ss_pred             ccccc--ccccccCChHHHHHhhhhcccC
Q psy2973         281 KYTCT--YCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       281 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      ||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.59  E-value=5.6e-05  Score=54.66  Aligned_cols=29  Identities=24%  Similarity=0.573  Sum_probs=13.5

Q ss_pred             CCcccccCCCcccccccccHHHHHHHhcC
Q psy2973         250 DQGRFKCPICGKHIRHKQTFDDHMNMHSG  278 (514)
Q Consensus       250 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  278 (514)
                      +++||.|.+|++.|.....|..|+++|++
T Consensus        10 ~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A           10 EAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            34444444444444444444444444444

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.59  E-value=3.8e-05  Score=46.36  Aligned_cols=26  Identities=31%  Similarity=0.668  Sum_probs=12.1

Q ss_pred             ccccc--ccccccCChHHHHHhhhhccc
Q psy2973         281 KYTCT--YCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       281 ~~~C~--~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      ||.|.  .|++.|.....|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44444  444444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.55  E-value=3.8e-05  Score=45.00  Aligned_cols=27  Identities=30%  Similarity=0.707  Sum_probs=20.0

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCE--KCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~--~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||.|+  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            357777  777777777777777777753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.66  E-value=1.3e-05  Score=47.56  Aligned_cols=21  Identities=14%  Similarity=0.512  Sum_probs=7.7

Q ss_pred             ccCCCcccccccccHHHHHHH
Q psy2973         255 KCPICGKHIRHKQTFDDHMNM  275 (514)
Q Consensus       255 ~C~~C~~~f~~~~~L~~H~~~  275 (514)
                      .|+.|++.|.....|..|+++
T Consensus         5 ~C~~C~k~f~~~~~l~~H~~~   25 (30)
T 2lvr_A            5 VCIHCQRQFADPGALQRHVRI   25 (30)
Confidence            333333333333333333333

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.46  E-value=6.3e-05  Score=44.47  Aligned_cols=26  Identities=31%  Similarity=0.704  Sum_probs=13.7

Q ss_pred             cccccccccccCChHHHHHh-hhhccc
Q psy2973         281 KYTCTYCEKSFLYKKSLKHH-LFVHSS  306 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H-~~~H~~  306 (514)
                      ||.|..|++.|.....|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 445544

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.46  E-value=2.8e-05  Score=44.43  Aligned_cols=21  Identities=24%  Similarity=0.748  Sum_probs=8.4

Q ss_pred             cccCCCcccccccccHHHHHH
Q psy2973         254 FKCPICGKHIRHKQTFDDHMN  274 (514)
Q Consensus       254 ~~C~~C~~~f~~~~~L~~H~~  274 (514)
                      |.|++|++.|.....|..|++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~   23 (26)
T 2lvu_A            3 YVCERCGKRFVQSSQLANHIR   23 (26)
Confidence            334444444444444444333

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.11  E-value=0.0006  Score=48.87  Aligned_cols=49  Identities=18%  Similarity=0.422  Sum_probs=31.7

Q ss_pred             cccccCChHHHHHHHHhhcCCCC----CCccccc--ccccccCChHHHHHHHHhh
Q psy2973         402 CQAIFTNKQRLNYHILTKHSGPN----YKAWKCE--KCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       402 C~~~f~~~~~L~~H~~~~H~~~~----~k~~~C~--~C~~~F~~~~~L~~H~~~H  450 (514)
                      |++.|.+...|..|+...|.+..    ..+|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            66666666666666655565442    1367774  6777777777777777754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.11  E-value=0.00023  Score=41.46  Aligned_cols=25  Identities=32%  Similarity=0.731  Sum_probs=12.6

Q ss_pred             ccccc--ccccccCChHHHHHhhhhcc
Q psy2973         281 KYTCT--YCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       281 ~~~C~--~C~~~f~~~~~L~~H~~~H~  305 (514)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34455  55555555555555555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.04  E-value=0.0014  Score=46.96  Aligned_cols=54  Identities=28%  Similarity=0.436  Sum_probs=40.0

Q ss_pred             ccccccCCHHHHHHHHHHhcCCCCCC-CCCCcccC--cCCcccCChHHHHHHHHhhc
Q psy2973         340 ICDKILSNIQGIRRHMENMHNSDKDN-TERPFQCN--DCGSTFRLKRHLNSHINRLH  393 (514)
Q Consensus       340 ~C~~~f~~~~~l~~H~~~~H~~~~~~-~~~~~~C~--~C~~~f~~~~~L~~H~~~~h  393 (514)
                      .|++.|.+...|..|+...|.+.... ...+|.|.  .|++.+.....|..|++..|
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            37888888888888887778764322 22478886  88888888888888887544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.41  E-value=0.0034  Score=54.81  Aligned_cols=55  Identities=16%  Similarity=0.352  Sum_probs=25.8

Q ss_pred             cccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhcccCC
Q psy2973         252 GRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       252 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      .+..|+.|+..+ .+..|..|+...-..+...|+.|+..+.. ..|..|...+.|+.
T Consensus       109 ~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          109 ALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLAL  163 (170)
T ss_dssp             SEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC--
T ss_pred             eeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChh
Confidence            344555555544 34445555544444444555555554432 34455555554443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.83  E-value=0.0048  Score=50.86  Aligned_cols=21  Identities=29%  Similarity=0.507  Sum_probs=13.5

Q ss_pred             cccccccccccCHHHHHHhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVK  503 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~  503 (514)
                      |-|.+|+..|.+...|..|+.
T Consensus        94 ~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           94 KCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TEETTTTEECSSHHHHHHHHT
T ss_pred             eEcCCCCCEeCCHHHHHHHHC
Confidence            556666666666666666654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.18  E-value=0.0037  Score=51.56  Aligned_cols=24  Identities=17%  Similarity=0.393  Sum_probs=20.1

Q ss_pred             CCceeccCCCcccccHHHHHHHHH
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVE  217 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~  217 (514)
                      .+++.|.+|+..|.+...+..|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~   53 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQ   53 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHC
Confidence            356889999999999999998874

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.67  E-value=0.017  Score=50.27  Aligned_cols=104  Identities=17%  Similarity=0.314  Sum_probs=72.2

Q ss_pred             ccCcccccccChH-----HHHhhHhcccCCCCceec--cCCCcccccHHHHHHHHHHhhcCCCCeecccccccccChhhh
Q psy2973         169 KCQFCPMWFEQRG-----KRRKHVNGVHLKIKRFKC--EVCPMKFHRQVSLKKHVEAVHLKLKPCKCEVCGKSFSNNSTL  241 (514)
Q Consensus       169 ~C~~C~~~f~~~~-----~l~~H~~~~h~~~k~~~C--~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~~C~~~f~~~~~L  241 (514)
                      .|+.|...+....     .+.+-+.     .....|  .-|+..+. ...|..|. . .=.-.+..|+.|+..+ .+..|
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~-----~l~v~C~n~GC~~~~~-~~~l~~H~-~-~C~~~~v~C~~C~~~~-~r~~l  125 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL-----SLMVKCPNEGCLHKME-LRHLEDHQ-A-HCEFALMDCPQCQRPF-QKFHI  125 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH-----TSEEECCSTTCCCEEE-GGGHHHHH-T-TCTTSEEECTTTCCEE-EGGGH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh-----hcccCCCCCCCCceec-HhHHHHHH-h-cCCceeeECCCCChHH-HHHHH
Confidence            7999987776431     2222222     344678  56887654 56778885 2 2234567899999988 66789


Q ss_pred             hhhhhhccCCcccccCCCcccccccccHHHHHHHhcCCCcc
Q psy2973         242 KVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSGDVKY  282 (514)
Q Consensus       242 ~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~  282 (514)
                      ..|....-..++..|+.|+..+. ...|..|..++.|+.++
T Consensus       126 ~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          126 NIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             HHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC----
T ss_pred             HHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhhh
Confidence            99998777788889999998885 57789999998887654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.20  E-value=0.012  Score=47.73  Aligned_cols=30  Identities=27%  Similarity=0.572  Sum_probs=22.7

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhh
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      .|+|.  ++|.|..|++.|.+.+.|..|+++.
T Consensus        44 d~tGe--kpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGG--GLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGG--GCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCC--cceEcccCcchhCCHHHHHHHHhhh
Confidence            45555  7788888888888888888887753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.12  E-value=0.015  Score=47.12  Aligned_cols=28  Identities=25%  Similarity=0.435  Sum_probs=17.1

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhh
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      |+|+++|.|..|++.|.+.+.|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4555666666666666666666666553

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.17  E-value=0.05  Score=35.16  Aligned_cols=25  Identities=24%  Similarity=0.509  Sum_probs=21.2

Q ss_pred             CcccccccccccCChHHHHHHHHhh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      .+|.|+.|+..|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            5688999999999999999998843

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=91.20  E-value=0.2  Score=30.26  Aligned_cols=27  Identities=37%  Similarity=0.476  Sum_probs=21.9

Q ss_pred             ceeccCCCcccccHHHHHHHHHHhhcC
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVEAVHLK  222 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  222 (514)
                      .|.|++|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            488888888888888888888777764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.61  E-value=0.19  Score=30.32  Aligned_cols=25  Identities=24%  Similarity=0.530  Sum_probs=15.3

Q ss_pred             cccCcCCcccCChHHHHHHHHhhcC
Q psy2973         370 FQCNDCGSTFRLKRHLNSHINRLHK  394 (514)
Q Consensus       370 ~~C~~C~~~f~~~~~L~~H~~~~h~  394 (514)
                      |.|++|.+.|.+...|..|....|.
T Consensus         6 FiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCcHHHHHcCCHHHHHHHHHhccc
Confidence            6666666666666666666655443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.30  E-value=0.17  Score=32.73  Aligned_cols=21  Identities=24%  Similarity=0.520  Sum_probs=14.1

Q ss_pred             ccccccccccCChhhHHHHhc
Q psy2973         459 SSCNECGKQYKWESFLQKHKK  479 (514)
Q Consensus       459 ~~C~~C~~~f~~~~~L~~H~~  479 (514)
                      |.|+.|+..|.....|..||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            566666666666666666665

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=87.64  E-value=0.43  Score=31.72  Aligned_cols=45  Identities=20%  Similarity=0.455  Sum_probs=26.5

Q ss_pred             cccccccccCChhhHHHHhcccc-cccccccc-cccCHHHHHHhhhh
Q psy2973         460 SCNECGKQYKWESFLQKHKKICT-TTCKSCGK-RYSSIYVLRNHVKS  504 (514)
Q Consensus       460 ~C~~C~~~f~~~~~L~~H~~~h~-~~C~~C~~-~f~~~~~l~~H~~~  504 (514)
                      .|.+|.....+...|..|....+ .+|++|-. ...+.++|..|.++
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~gqCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCINGQCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTTBCTTTCCBCCSSHHHHHHHHTT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCCCCCcccCcCCcCHHHHHHHHHH
Confidence            46666666666666666666655 56666643 34455666666554

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.95  E-value=0.62  Score=34.03  Aligned_cols=48  Identities=15%  Similarity=0.450  Sum_probs=24.6

Q ss_pred             ccccc-CCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhh
Q psy2973         252 GRFKC-PICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHL  301 (514)
Q Consensus       252 ~~~~C-~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  301 (514)
                      .+..| ..|+..+. +..|..|+...-..++..|..|+..|.. ..|..|.
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~   63 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHE   63 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTT
T ss_pred             cccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHH
Confidence            34455 35555443 3455555544344455566666665543 3455555

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=80.83  E-value=0.43  Score=34.57  Aligned_cols=28  Identities=14%  Similarity=0.246  Sum_probs=17.8

Q ss_pred             cCChhhHHHHhcccccccccccccccCH
Q psy2973         468 YKWESFLQKHKKICTTTCKSCGKRYSSI  495 (514)
Q Consensus       468 f~~~~~L~~H~~~h~~~C~~C~~~f~~~  495 (514)
                      |..+..+..-...-.|+||.||..|--+
T Consensus        37 ~kDr~~Fl~~~e~F~FkCP~CgEEFyG~   64 (95)
T 2k5c_A           37 VKDRERFLAQVEEFVFKCPVCGEEFYGK   64 (95)
T ss_dssp             TTCHHHHHHHHHHSEEECTTTCCEEETT
T ss_pred             HhhHHHHHHHHHHHhhcCCCccHHHhcc
Confidence            4445555444444458999999888543

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=80.44  E-value=0.37  Score=35.12  Aligned_cols=45  Identities=33%  Similarity=0.698  Sum_probs=20.7

Q ss_pred             cccccccccccccCChhhHHHHhcccc----cccccccccccCHHHHHHhh
Q psy2973         456 MLDSSCNECGKQYKWESFLQKHKKICT----TTCKSCGKRYSSIYVLRNHV  502 (514)
Q Consensus       456 ~~~~~C~~C~~~f~~~~~L~~H~~~h~----~~C~~C~~~f~~~~~l~~H~  502 (514)
                      ++.|.|..||.+.. +..|..|...+.    |.|-.|+..|.. ..++.|.
T Consensus         8 MV~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Ht   56 (79)
T 1wjv_A            8 MVFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHV   56 (79)
T ss_dssp             CCEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCC
T ss_pred             eeEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEe
Confidence            33455555554433 334555543322    455555555543 3344444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	514
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	9e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTHADQGRFKCPICGKHIRHKQTFDDHMNMH 276
           K   C+ CGKSF++ S    H + H     + C +CGK  + K     HM +H
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 254 FKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVH 304
           + C  CGK   HK   D HM+MH G   Y C  C K F  K  L  H+ +H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKI 480
           K + C+ C   F       RHM +H   R      C  CGK++K +  L  H KI
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY---GCGVCGKKFKMKHHLVGHMKI 52

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 4e-05
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
           +H   KP  C  CGK+FS +S L  H   H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE 307
           +HSG+  Y C  C K+F     L  H  VH+ E
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP +C +C ++FS +  L  H  TH
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTH 26

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHS-TTHADQGRFKCPI 258
           KP  C+ CGK FS    L  H    H  +   KC +
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCEV 230
           K + C+ C   F R   L  H++ VH   +P KC+V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 366 TERPFQCNDCGSTFRLKRHLNSHINRLH 393
             +P+ C  CG  F    HLN HI ++H
Sbjct: 2   VGKPYICQSCGKGFSRPDHLNGHIKQVH 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (84), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTHAD 250
            H   KP  C  C K+F     L +H   + D
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           +   CEVC ++F+    LK H  +H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSH 25

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 6e-04
 Identities = 14/25 (56%), Positives = 15/25 (60%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           KP KC  CGK+FS NS L  H   H
Sbjct: 1   KPYKCLECGKAFSQNSGLINHQRIH 25

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 9e-04
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
            H   KP +C +C   F+ + T+K+H    
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 367 ERPFQCNDCGSTFRLKRHLNSHINRLH 393
           E+P++C  C + F     +  HI + H
Sbjct: 6   EKPYECYICHARFTQSGTMKMHILQKH 32

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 9/25 (36%), Positives = 10/25 (40%)

Query: 224 KPCKCEVCGKSFSNNSTLKVHSTTH 248
           K   C  C K F  +  L  H  TH
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTH 25

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 219 VHLKLKPCKCEVCGKSFSNNSTLKVHSTTH 248
               +KP +C  C +SFS +  L +H   H
Sbjct: 5   GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 226 CKCEVCGKSFSNNSTLKVHSTTHADQGRFKC 256
           C    CGKSF+    LK H   H+D   + C
Sbjct: 4   CPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	514
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.48
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.45
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.94
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.92
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.87
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.86
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.85
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.78
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.78
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.75
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.73
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.72
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.67
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.64
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.63
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.62
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.62
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.6
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.53
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.53
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.51
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.41
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.37
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.26
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.25
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.11
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.11
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.1
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.03
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	97.95
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.91
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.84
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.83
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.82
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.82
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.81
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.75
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.69
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.62
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.57
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.55
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.51
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.49
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.42
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.37
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.32
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.19
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.03
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.97
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.91
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.85
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.83
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.82
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.81
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.76
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.72
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.56
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.55
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.51
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.47
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.45
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.32
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.23
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.15
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.1
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.04
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.88
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.65
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.58
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.44
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.07
d1v65a_	64	hypotheical protein 2610044O15Rik {Mouse (Mus musc	95.07
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.94
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.79
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.95
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.9
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.88
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.78
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.71
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.7
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.62
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.56
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.19
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.42
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.06
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.54
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.31
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.47
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.92
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.21
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.06
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.01
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.83
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.24
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.23
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	84.09
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	83.67
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	82.41
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	81.22
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	81.01
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	80.59
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	80.33

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=8.5e-15  Score=100.77  Aligned_cols=52  Identities=35%  Similarity=0.682  Sum_probs=48.2

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCCcccccccccccccCChhhHHHHhccc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRNMLDSSCNECGKQYKWESFLQKHKKIC  481 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h  481 (514)
                      |||+|. ||++|....+|..|+++|++++|   |.|++||++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekp---y~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP---YGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCS---EECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccC---CcCCCcCCEecCHHHHHHHHhcC
Confidence            789995 99999999999999999999998   89999999999999999999886

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.5e-14  Score=99.44  Aligned_cols=52  Identities=40%  Similarity=0.747  Sum_probs=25.8

Q ss_pred             cccccCCCcccccccccHHHHHHHhcCCCcccccccccccCChHHHHHhhhhc
Q psy2973         252 GRFKCPICGKHIRHKQTFDDHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       252 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      +||.| .||+.|.....|..|+++|++++||.|.+||++|...+.|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            44455 25555555555555555555555555555555555555555554443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.3e-10  Score=72.28  Aligned_cols=36  Identities=33%  Similarity=0.678  Sum_probs=21.3

Q ss_pred             CCceeccCCCcccccHHHHHHHHHHhhcCCCCeecc
Q psy2973         194 IKRFKCEVCPMKFHRQVSLKKHVEAVHLKLKPCKCE  229 (514)
Q Consensus       194 ~k~~~C~~C~~~f~~~~~l~~H~~~~H~~~k~~~C~  229 (514)
                      ++||.|++|++.|...+.|..|++++|++++||.|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            455666666666666666666654456666666554

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=7.8e-11  Score=73.56  Aligned_cols=35  Identities=29%  Similarity=0.674  Sum_probs=15.0

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhcC
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHSG  278 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  278 (514)
                      |+++|++++||.|++||++|...+.|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            34444444444444444444444444444444443

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=2.3e-10  Score=71.15  Aligned_cols=38  Identities=26%  Similarity=0.496  Sum_probs=35.3

Q ss_pred             CCCccccCcccccccChHHHHhhHhcccCCCCceeccC
Q psy2973         164 GENKFKCQFCPMWFEQRGKRRKHVNGVHLKIKRFKCEV  201 (514)
Q Consensus       164 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~k~~~C~~  201 (514)
                      .++||.|.+||+.|...+.|..|++.+|++++||.|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            46899999999999999999999877899999999974

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=1.6e-10  Score=72.13  Aligned_cols=37  Identities=27%  Similarity=0.420  Sum_probs=30.0

Q ss_pred             HHHHHhcCCCcccccccccccCChHHHHHhhhhcccC
Q psy2973         271 DHMNMHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       271 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      +|+++|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4677888888888888888888888888888888775

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.5e-10  Score=67.01  Aligned_cols=33  Identities=33%  Similarity=0.644  Sum_probs=28.9

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +|+++  +||+|..|+++|...+.|..|+++|+|+
T Consensus         1 IHTge--kpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGE--KPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTC--CCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCC--CCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            47777  8999999999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.2e-10  Score=67.11  Aligned_cols=32  Identities=41%  Similarity=0.696  Sum_probs=18.9

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhcccC
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      |++++||.|.+||++|...+.|..|+++|++|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            55556666666666666666666666665553

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.8e-10  Score=68.46  Aligned_cols=32  Identities=22%  Similarity=0.476  Sum_probs=30.2

Q ss_pred             ccccc--ccccccCHHHHHHhhhhhhCCCCCCCC
Q psy2973         483 TTCKS--CGKRYSSIYVLRNHVKSCYGQQKNLSH  514 (514)
Q Consensus       483 ~~C~~--C~~~f~~~~~l~~H~~~h~ge~~~~c~  514 (514)
                      |.|++  |++.|..+..|+.|+++|+||+||+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67886  999999999999999999999999996

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.85  E-value=6.7e-10  Score=64.28  Aligned_cols=29  Identities=31%  Similarity=0.781  Sum_probs=26.5

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.1e-09  Score=63.16  Aligned_cols=29  Identities=31%  Similarity=0.848  Sum_probs=26.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      |||.|++|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=7.9e-10  Score=68.37  Aligned_cols=29  Identities=24%  Similarity=0.403  Sum_probs=10.9

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhh
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFV  303 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~  303 (514)
                      +|+|++||.|++|+++|..++.|..|+++
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H~r~   33 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALHRKR   33 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGG
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHHHhc
Confidence            33333333333333333333333333333

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.3e-09  Score=66.92  Aligned_cols=32  Identities=31%  Similarity=0.643  Sum_probs=16.9

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      +|+|++||.|.+||++|...+.|..|+++|++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            45555555555555555555555555555543

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=1.6e-09  Score=61.79  Aligned_cols=27  Identities=26%  Similarity=0.664  Sum_probs=25.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      |||+|++|+++|...+.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            899999999999999999999999986

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=3e-09  Score=65.21  Aligned_cols=33  Identities=30%  Similarity=0.622  Sum_probs=29.2

Q ss_pred             hcCCCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy2973         419 KHSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       419 ~H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      .|+++  +||+|.+|+++|...+.|..|+++|+++
T Consensus         2 ~HTge--kPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGE--KPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCC--CCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCC--CCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            68887  8999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=2e-09  Score=66.47  Aligned_cols=34  Identities=18%  Similarity=0.416  Sum_probs=24.4

Q ss_pred             hhhhccCCcccccCCCcccccccccHHHHHHHhc
Q psy2973         244 HSTTHADQGRFKCPICGKHIRHKQTFDDHMNMHS  277 (514)
Q Consensus       244 H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~h~  277 (514)
                      |.++|++++||.|++|++.|...+.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            5667777777777777777777777777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.72  E-value=3.1e-09  Score=64.18  Aligned_cols=32  Identities=38%  Similarity=0.698  Sum_probs=28.0

Q ss_pred             cCCCCCCcccccccccccCChHHHHHHHHhhcCC
Q psy2973         420 HSGPNYKAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       420 H~~~~~k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      |+|+  +||+|.+|++.|...++|..|+++|+..
T Consensus         2 ~TGe--kPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGK--RPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCC--SCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCC--ccccCCCCCCcccChHHHHHHccccCCc
Confidence            5666  9999999999999999999999999864

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.67  E-value=5.2e-09  Score=63.20  Aligned_cols=31  Identities=32%  Similarity=0.607  Sum_probs=17.2

Q ss_pred             hcCCCcccccccccccCChHHHHHhhhhccc
Q psy2973         276 HSGDVKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       276 h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      |+|++||.|.+|++.|...++|..|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3455555555555555555555555555544

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=5.3e-09  Score=57.98  Aligned_cols=26  Identities=35%  Similarity=0.763  Sum_probs=19.6

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      |||+|..||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57777777777777777777777774

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.63  E-value=6.4e-09  Score=67.73  Aligned_cols=41  Identities=17%  Similarity=0.425  Sum_probs=31.1

Q ss_pred             hhhhhhhhhccCCcccccCC--CcccccccccHHHHHHHhcCCC
Q psy2973         239 STLKVHSTTHADQGRFKCPI--CGKHIRHKQTFDDHMNMHSGDV  280 (514)
Q Consensus       239 ~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~  280 (514)
                      +.|..|+. |.+++||.|.+  |++.|...+.|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            45666664 77888888866  8888888888888888887764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=5e-09  Score=64.04  Aligned_cols=28  Identities=32%  Similarity=0.744  Sum_probs=15.8

Q ss_pred             HhcCCCcccccccccccCChHHHHHhhh
Q psy2973         275 MHSGDVKYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       275 ~h~~~~~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      +|+|++||.|++|++.|...++|..|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            4555555555555555555555555554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.62  E-value=8.5e-09  Score=59.52  Aligned_cols=27  Identities=30%  Similarity=0.726  Sum_probs=14.1

Q ss_pred             cccccccccccCChHHHHHhhhhcccC
Q psy2973         281 KYTCTYCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      ||.|++|++.|...+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            455555555555555555555555544

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.6e-08  Score=61.73  Aligned_cols=32  Identities=25%  Similarity=0.556  Sum_probs=18.9

Q ss_pred             ccCCCCceeccCCCcccccHHHHHHHHHHhhc
Q psy2973         190 VHLKIKRFKCEVCPMKFHRQVSLKKHVEAVHL  221 (514)
Q Consensus       190 ~h~~~k~~~C~~C~~~f~~~~~l~~H~~~~H~  221 (514)
                      +|++++||.|++|++.|...+.|..|+++.|.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            45566666666666666666666666544444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=8.4e-09  Score=58.75  Aligned_cols=26  Identities=23%  Similarity=0.602  Sum_probs=11.1

Q ss_pred             CcccccccccccCChHHHHHhhhhcc
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~~H~  305 (514)
                      +||.|++|++.|...+.|..|+++|+
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             cCccCCCCcCEecccccccccCCCcc
Confidence            34444444444444444444444443

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.3e-08  Score=58.58  Aligned_cols=26  Identities=27%  Similarity=0.747  Sum_probs=11.0

Q ss_pred             ccccCCCcccccccccHHHHHHHhcC
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHSG  278 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~~  278 (514)
                      ||.|++|++.|...+.|..|+++|+|
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCC
Confidence            34444444444444444444444443

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.2e-08  Score=57.96  Aligned_cols=28  Identities=32%  Similarity=0.628  Sum_probs=24.8

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|++  |+++|...+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899988  999999999999999999875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.53  E-value=3.9e-09  Score=68.74  Aligned_cols=42  Identities=19%  Similarity=0.526  Sum_probs=35.8

Q ss_pred             cccHHHHHHHhcCCCcccccc--cccccCChHHHHHhhhhcccCC
Q psy2973         266 KQTFDDHMNMHSGDVKYTCTY--CEKSFLYKKSLKHHLFVHSSEF  308 (514)
Q Consensus       266 ~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  308 (514)
                      +..|..|+. |++++||.|.+  |++.|...+.|..|+++|++++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            456677775 89999999987  9999999999999999999874

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2e-08  Score=58.30  Aligned_cols=28  Identities=32%  Similarity=0.784  Sum_probs=25.2

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|++  |+++|...+.|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5899977  999999999999999999885

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.4e-08  Score=60.72  Aligned_cols=32  Identities=38%  Similarity=0.827  Sum_probs=28.6

Q ss_pred             ccccc--cccccCChHHHHHHHHhhcCCCCccccccc
Q psy2973         428 WKCEK--CDMRFVTNKNLKRHMKVHEKNRNMLDSSCN  462 (514)
Q Consensus       428 ~~C~~--C~~~F~~~~~L~~H~~~H~~~~~~~~~~C~  462 (514)
                      |.|+.  |+++|...+.|++|+++|+|++|   |.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekp---y~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD---YICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCC---CSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCC---EeCC
Confidence            78876  99999999999999999999999   7886

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=6.4e-08  Score=56.63  Aligned_cols=29  Identities=28%  Similarity=0.740  Sum_probs=25.2

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCCC
Q psy2973         426 KAWKCE--KCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       426 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +||.|+  .|+++|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589995  59999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.37  E-value=4.8e-08  Score=54.05  Aligned_cols=21  Identities=33%  Similarity=0.623  Sum_probs=7.8

Q ss_pred             ccccccccccCChHHHHHhhh
Q psy2973         282 YTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       282 ~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      |.|.+||++|...+.|..|++
T Consensus         3 y~C~eCgK~F~~~s~L~~Hqr   23 (26)
T d1x6ea2           3 YKCLECGKAFSQNSGLINHQR   23 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHHH
T ss_pred             ccCCCCcCeeccCcccccCcc
Confidence            333333333333333333333

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.1e-07  Score=53.72  Aligned_cols=26  Identities=38%  Similarity=0.711  Sum_probs=12.7

Q ss_pred             cccccc--cccccCChHHHHHhhhhccc
Q psy2973         281 KYTCTY--CEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       281 ~~~C~~--C~~~f~~~~~L~~H~~~H~~  306 (514)
                      ||.|++  |++.|...+.|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444444  44444444445445444444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.25  E-value=1.4e-07  Score=53.95  Aligned_cols=27  Identities=33%  Similarity=0.883  Sum_probs=23.1

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||.|++  |+++|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788977  99999999999999988875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.7e-07  Score=53.37  Aligned_cols=27  Identities=41%  Similarity=0.751  Sum_probs=22.7

Q ss_pred             cccccc--ccccccCHHHHHHhhhhhhCC
Q psy2973         482 TTTCKS--CGKRYSSIYVLRNHVKSCYGQ  508 (514)
Q Consensus       482 ~~~C~~--C~~~f~~~~~l~~H~~~h~ge  508 (514)
                      +|.|++  |+++|..++.|+.|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCCC
Confidence            477876  888888888888898888886

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=3.5e-07  Score=51.68  Aligned_cols=26  Identities=31%  Similarity=0.761  Sum_probs=19.5

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~  451 (514)
                      +||.|+.  |+++|...++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777774

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.11  E-value=7.9e-07  Score=51.84  Aligned_cols=27  Identities=37%  Similarity=0.770  Sum_probs=15.2

Q ss_pred             ccccc--ccccccCChHHHHHhhhhcccC
Q psy2973         281 KYTCT--YCEKSFLYKKSLKHHLFVHSSE  307 (514)
Q Consensus       281 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  307 (514)
                      ||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            55554  2555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=8.3e-07  Score=52.02  Aligned_cols=28  Identities=39%  Similarity=0.905  Sum_probs=23.7

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|++  |+++|...+.|.+|+++|+..
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            7888977  999999999999999888753

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.2e-06  Score=45.72  Aligned_cols=26  Identities=38%  Similarity=0.728  Sum_probs=18.5

Q ss_pred             cccccccccccCChHHHHHHHHhhcC
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      |.+|+.|++.|+.+..|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777764

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.95  E-value=2.2e-06  Score=50.13  Aligned_cols=26  Identities=31%  Similarity=0.663  Sum_probs=12.5

Q ss_pred             Ccccccc--cccccCChHHHHHhhhhcc
Q psy2973         280 VKYTCTY--CEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       280 ~~~~C~~--C~~~f~~~~~L~~H~~~H~  305 (514)
                      +||.|++  |++.|...+.|.+|+++|+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            4444444  4444444444444444444

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.91  E-value=1.5e-06  Score=49.57  Aligned_cols=25  Identities=28%  Similarity=0.789  Sum_probs=12.3

Q ss_pred             cccccc--cccccCChHHHHHhhhhcc
Q psy2973         281 KYTCTY--CEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       281 ~~~C~~--C~~~f~~~~~L~~H~~~H~  305 (514)
                      ||.|++  |++.|...+.|..|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            444544  5555555555555555444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=4.2e-06  Score=45.11  Aligned_cols=27  Identities=22%  Similarity=0.543  Sum_probs=22.9

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      |.|++||......+.|.+|+|+|+||+
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            678888888888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=4.4e-06  Score=43.55  Aligned_cols=24  Identities=33%  Similarity=0.728  Sum_probs=17.0

Q ss_pred             ccccccccccCHHHHHHhhhhhhC
Q psy2973         484 TCKSCGKRYSSIYVLRNHVKSCYG  507 (514)
Q Consensus       484 ~C~~C~~~f~~~~~l~~H~~~h~g  507 (514)
                      +|..|++.|+.+..|+.|+|+|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            567777777777777777777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=4.2e-06  Score=46.98  Aligned_cols=30  Identities=30%  Similarity=0.625  Sum_probs=27.9

Q ss_pred             cccccccccccCHHHHHHhhhhhhCCCCCC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYGQQKNL  512 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~ge~~~~  512 (514)
                      ..|..||+.|.....|..|..+|+||+||.
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            469999999999999999999999999984

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=3.9e-06  Score=47.27  Aligned_cols=24  Identities=25%  Similarity=0.755  Sum_probs=11.0

Q ss_pred             ccccCC--CcccccccccHHHHHHHh
Q psy2973         253 RFKCPI--CGKHIRHKQTFDDHMNMH  276 (514)
Q Consensus       253 ~~~C~~--C~~~f~~~~~L~~H~~~h  276 (514)
                      ||.|++  |+++|...++|..|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            444444  444444444444444444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=6.1e-06  Score=45.20  Aligned_cols=28  Identities=25%  Similarity=0.735  Sum_probs=25.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|++|+..|..+..|..|.++|.|.
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCcccchHHHHhhccccceEeeecccCc
Confidence            7999999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=6.7e-06  Score=43.08  Aligned_cols=26  Identities=31%  Similarity=0.715  Sum_probs=24.7

Q ss_pred             ccccccccccCHHHHHHhhhhhhCCC
Q psy2973         484 TCKSCGKRYSSIYVLRNHVKSCYGQQ  509 (514)
Q Consensus       484 ~C~~C~~~f~~~~~l~~H~~~h~ge~  509 (514)
                      +|+.|.+.|.++..|+.|.|.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.69  E-value=1.1e-05  Score=43.61  Aligned_cols=26  Identities=35%  Similarity=0.784  Sum_probs=22.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      +||.|.+||+.|......++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            78888888888888888888888874

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=1.4e-05  Score=42.68  Aligned_cols=28  Identities=21%  Similarity=0.571  Sum_probs=24.9

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||+|..|.+.-...+.|..|++.|+|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            7899999999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=2.3e-05  Score=43.98  Aligned_cols=29  Identities=31%  Similarity=0.434  Sum_probs=17.4

Q ss_pred             ccccccccccCChHHHHHhhhhcccCCcc
Q psy2973         282 YTCTYCEKSFLYKKSLKHHLFVHSSEFTS  310 (514)
Q Consensus       282 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  310 (514)
                      ..|..||+.|.....|.+|...|++++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            45666666666666666666666666655

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=2e-05  Score=42.51  Aligned_cols=25  Identities=24%  Similarity=0.595  Sum_probs=12.4

Q ss_pred             CcccccccccccCChHHHHHhhhhc
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~~H  304 (514)
                      +||.|.+||+.|.......+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4455555555555555555554444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=2.6e-05  Score=42.74  Aligned_cols=27  Identities=26%  Similarity=0.667  Sum_probs=21.1

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||.|.+  |++++...++|+.|+++++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788866  88888888888888887664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=3.2e-05  Score=40.94  Aligned_cols=26  Identities=31%  Similarity=0.859  Sum_probs=23.4

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      +||+|..|+.+-...++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            78999999999999999999999885

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=3.4e-05  Score=41.01  Aligned_cols=25  Identities=28%  Similarity=0.593  Sum_probs=20.2

Q ss_pred             ccccccccccCHHHHHHhhhhhhCC
Q psy2973         484 TCKSCGKRYSSIYVLRNHVKSCYGQ  508 (514)
Q Consensus       484 ~C~~C~~~f~~~~~l~~H~~~h~ge  508 (514)
                      .|..||+.|...+.|+.|+.+|+||
T Consensus         4 vc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccCC
Confidence            5778888888888888888888876

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=4e-05  Score=41.90  Aligned_cols=25  Identities=28%  Similarity=0.848  Sum_probs=10.9

Q ss_pred             ccccCCCcccccccccHHHHHHHhc
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMHS  277 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h~  277 (514)
                      ||.|++|+..|..+..+.-|.+.|.
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CcccchHHHHhhccccceEeeeccc
Confidence            4444444444444444444444443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=5.3e-05  Score=40.45  Aligned_cols=27  Identities=22%  Similarity=0.411  Sum_probs=14.2

Q ss_pred             CcccccccccccCChHHHHHhhhhccc
Q psy2973         280 VKYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       280 ~~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      +||+|..|...-+..+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555555555555555555555544

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=7.9e-05  Score=40.06  Aligned_cols=27  Identities=33%  Similarity=0.743  Sum_probs=19.9

Q ss_pred             ccccccccccCChHHHHHHHHhhcCCC
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      |.|+.|+....-.+-|..|+|+|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            667777777777777777777777653

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=9.3e-05  Score=39.30  Aligned_cols=26  Identities=38%  Similarity=0.716  Sum_probs=18.0

Q ss_pred             ccccccccccCChHHHHHHHHhhcCC
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      ..|..||++|...+.|++|..+|+++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            45777777777777777777777653

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00017  Score=38.74  Aligned_cols=24  Identities=38%  Similarity=0.841  Sum_probs=18.5

Q ss_pred             cccccccccccCChHHHHHHHHhh
Q psy2973         427 AWKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      ||.|..|+..|.++.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            577888888888888888888753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.97  E-value=0.00019  Score=36.85  Aligned_cols=23  Identities=43%  Similarity=0.941  Sum_probs=14.8

Q ss_pred             ccccccccccCChHHHHHHHHhh
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H  450 (514)
                      |+|..|.++|..+++|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666665

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00034  Score=37.73  Aligned_cols=29  Identities=28%  Similarity=0.621  Sum_probs=21.3

Q ss_pred             CceeccCCCcccccHHHHHHHHHHhhcCC
Q psy2973         195 KRFKCEVCPMKFHRQVSLKKHVEAVHLKL  223 (514)
Q Consensus       195 k~~~C~~C~~~f~~~~~l~~H~~~~H~~~  223 (514)
                      +||.|..|.....+.++|+.|+...|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            46777777777777777777777666654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.85  E-value=0.00032  Score=41.51  Aligned_cols=30  Identities=30%  Similarity=0.740  Sum_probs=26.8

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCCCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKNRN  455 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~~~  455 (514)
                      +.|+|.+|++.|.+..+|--||+.|..++.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            669999999999999999999999987765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.83  E-value=0.00035  Score=35.83  Aligned_cols=23  Identities=17%  Similarity=0.423  Sum_probs=13.9

Q ss_pred             cccccccccccCHHHHHHhhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSC  505 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h  505 (514)
                      |+|..|.++|..++.|..|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            45666666666666666666655

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00023  Score=38.95  Aligned_cols=25  Identities=48%  Similarity=0.817  Sum_probs=17.9

Q ss_pred             ccccc--ccccccCHHHHHHhhhhhhC
Q psy2973         483 TTCKS--CGKRYSSIYVLRNHVKSCYG  507 (514)
Q Consensus       483 ~~C~~--C~~~f~~~~~l~~H~~~h~g  507 (514)
                      |.|..  |+++|+..++|++|++++||
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            45553  77777777777777777765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0004  Score=37.43  Aligned_cols=27  Identities=33%  Similarity=0.776  Sum_probs=18.8

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||.|..|.....+.++|+.|+++.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777776443

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.00051  Score=35.82  Aligned_cols=26  Identities=27%  Similarity=0.661  Sum_probs=19.7

Q ss_pred             cccccccccCChHHHHHHHHhhcCCC
Q psy2973         429 KCEKCDMRFVTNKNLKRHMKVHEKNR  454 (514)
Q Consensus       429 ~C~~C~~~F~~~~~L~~H~~~H~~~~  454 (514)
                      +|+.|.++|.++.-|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.72  E-value=0.00046  Score=36.90  Aligned_cols=28  Identities=25%  Similarity=0.571  Sum_probs=25.1

Q ss_pred             CcccccccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      ..|.|..|...|..+..|+.||-.|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4689999999999999999999999875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00059  Score=40.44  Aligned_cols=24  Identities=29%  Similarity=0.760  Sum_probs=17.1

Q ss_pred             CCcccccccccccCChHHHHHHHH
Q psy2973         425 YKAWKCEKCDMRFVTNKNLKRHMK  448 (514)
Q Consensus       425 ~k~~~C~~C~~~F~~~~~L~~H~~  448 (514)
                      .|||.|.+|++.|-++.++.+|..
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            367777777777777777777754

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.55  E-value=0.0007  Score=37.32  Aligned_cols=27  Identities=26%  Similarity=0.623  Sum_probs=17.4

Q ss_pred             ceeccCCCcccccHHHHHHHHHHhhcC
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVEAVHLK  222 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  222 (514)
                      ||.|.+|++.|..+..|..|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            466666666666666666666666654

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.52  E-value=0.0007  Score=36.19  Aligned_cols=25  Identities=32%  Similarity=0.798  Sum_probs=11.9

Q ss_pred             cccCCCcccccccccHHHHHHHhcC
Q psy2973         254 FKCPICGKHIRHKQTFDDHMNMHSG  278 (514)
Q Consensus       254 ~~C~~C~~~f~~~~~L~~H~~~h~~  278 (514)
                      |.|..|...|..+..|..||-.|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444443

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.51  E-value=0.00072  Score=37.26  Aligned_cols=27  Identities=22%  Similarity=0.525  Sum_probs=25.3

Q ss_pred             ccccCcccccccChHHHHhhHhcccCC
Q psy2973         167 KFKCQFCPMWFEQRGKRRKHVNGVHLK  193 (514)
Q Consensus       167 ~~~C~~C~~~f~~~~~l~~H~~~~h~~  193 (514)
                      ||.|.+|++.|..+..|.+|.+++|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            789999999999999999999988876

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.47  E-value=0.00076  Score=36.04  Aligned_cols=25  Identities=48%  Similarity=0.897  Sum_probs=20.3

Q ss_pred             Ccccccc--cccccCChHHHHHHHHhh
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHMKVH  450 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~~~H  450 (514)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788854  888888888888888877

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00068  Score=35.78  Aligned_cols=24  Identities=21%  Similarity=0.688  Sum_probs=10.1

Q ss_pred             ccccCCCcccccccccHHHHHHHh
Q psy2973         253 RFKCPICGKHIRHKQTFDDHMNMH  276 (514)
Q Consensus       253 ~~~C~~C~~~f~~~~~L~~H~~~h  276 (514)
                      ||+|..|.+.-...++|..|+++|
T Consensus         3 p~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CcccccccchhcchhhHhhhhhcc
Confidence            344444444444444444444443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.00081  Score=39.85  Aligned_cols=26  Identities=23%  Similarity=0.641  Sum_probs=22.6

Q ss_pred             CCCCcccccccccccccCChhhHHHHhcc
Q psy2973         452 KNRNMLDSSCNECGKQYKWESFLQKHKKI  480 (514)
Q Consensus       452 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  480 (514)
                      |-+|   |.|..|++.|.|+.++..|.-.
T Consensus         2 GiKP---YeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKP---YECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCC---EECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCc---eeccchhhhhhhHHHHHHhhhh
Confidence            4566   9999999999999999999765

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0014  Score=35.27  Aligned_cols=27  Identities=30%  Similarity=0.621  Sum_probs=17.8

Q ss_pred             CcccccccccccCChHHHHHHHHhhcC
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      +||+|..|.......++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            366777777766777777777665444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0012  Score=35.00  Aligned_cols=24  Identities=29%  Similarity=0.421  Sum_probs=17.2

Q ss_pred             cccccccccccCHHHHHHhhhhhh
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCY  506 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~  506 (514)
                      -+|+.|.++.+++..|+.|-|+|-
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            467777777777777777777764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.15  E-value=0.0015  Score=34.93  Aligned_cols=22  Identities=45%  Similarity=0.851  Sum_probs=12.2

Q ss_pred             cccccccccccCChHHHHHhhh
Q psy2973         281 KYTCTYCEKSFLYKKSLKHHLF  302 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H~~  302 (514)
                      ||.|..|+.+|.++.+|..||.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3555555555555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.10  E-value=0.0019  Score=38.15  Aligned_cols=26  Identities=35%  Similarity=0.838  Sum_probs=13.5

Q ss_pred             cccccccccccCChHHHHHhhhhccc
Q psy2973         281 KYTCTYCEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       281 ~~~C~~C~~~f~~~~~L~~H~~~H~~  306 (514)
                      .|.|.+|++.|.+...|--|++.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            35555555555555555555555543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0023  Score=34.37  Aligned_cols=25  Identities=32%  Similarity=0.826  Sum_probs=14.6

Q ss_pred             CcccCcCCcccCChHHHHHHHHhhc
Q psy2973         369 PFQCNDCGSTFRLKRHLNSHINRLH  393 (514)
Q Consensus       369 ~~~C~~C~~~f~~~~~L~~H~~~~h  393 (514)
                      ||+|..|.......++|..|++..|
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHHHc
Confidence            5566666655566666666655444

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.88  E-value=0.0011  Score=36.60  Aligned_cols=26  Identities=27%  Similarity=0.698  Sum_probs=16.2

Q ss_pred             Ccccccc--cccccCChHHHHHHH-Hhhc
Q psy2973         426 KAWKCEK--CDMRFVTNKNLKRHM-KVHE  451 (514)
Q Consensus       426 k~~~C~~--C~~~F~~~~~L~~H~-~~H~  451 (514)
                      +||.|..  |.++|+..+.-..|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            4566655  666666666666665 5654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.65  E-value=0.0027  Score=34.02  Aligned_cols=28  Identities=29%  Similarity=0.646  Sum_probs=22.4

Q ss_pred             Cccccc--ccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKCE--KCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C~--~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +||.|.  .|.+.|.+.-.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            467774  4888899888899998888874

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0029  Score=34.83  Aligned_cols=21  Identities=48%  Similarity=0.822  Sum_probs=9.5

Q ss_pred             Ceeccc--ccccccChhhhhhhh
Q psy2973         225 PCKCEV--CGKSFSNNSTLKVHS  245 (514)
Q Consensus       225 ~~~C~~--C~~~f~~~~~L~~H~  245 (514)
                      ||.|..  |.+.|++.++-..|+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHq   24 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQ   24 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHH
T ss_pred             CccccCCChhhhhcchhhhhhhc
Confidence            444433  444444444444443

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.44  E-value=0.0036  Score=33.38  Aligned_cols=24  Identities=42%  Similarity=0.764  Sum_probs=11.2

Q ss_pred             cccccc--cccccCChHHHHHhhhhc
Q psy2973         281 KYTCTY--CEKSFLYKKSLKHHLFVH  304 (514)
Q Consensus       281 ~~~C~~--C~~~f~~~~~L~~H~~~H  304 (514)
                      ||.|+.  |++.|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            344443  444444444444444433

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.38  E-value=0.0026  Score=34.04  Aligned_cols=26  Identities=31%  Similarity=0.677  Sum_probs=13.5

Q ss_pred             cccccc--cccccCChHHHHHhhhhccc
Q psy2973         281 KYTCTY--CEKSFLYKKSLKHHLFVHSS  306 (514)
Q Consensus       281 ~~~C~~--C~~~f~~~~~L~~H~~~H~~  306 (514)
                      ||.|.+  |.+.|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            444443  55555555555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.07  E-value=0.0096  Score=30.37  Aligned_cols=22  Identities=27%  Similarity=0.735  Sum_probs=12.7

Q ss_pred             ceeccCCCcccccHHHHHHHHH
Q psy2973         196 RFKCEVCPMKFHRQVSLKKHVE  217 (514)
Q Consensus       196 ~~~C~~C~~~f~~~~~l~~H~~  217 (514)
                      ||+|..|...|..+.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4555556655655555555553

>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: KRAB domain (Kruppel-associated box)
superfamily: KRAB domain (Kruppel-associated box)
family: KRAB domain (Kruppel-associated box)
domain: hypotheical protein 2610044O15Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.07  E-value=0.0037  Score=42.17  Aligned_cols=35  Identities=17%  Similarity=0.020  Sum_probs=23.8

Q ss_pred             CCcCccccccccce----eeccCCchhhhhhhhhccccc
Q psy2973          85 ELYTPDFFQSLFGF----SIFDCQDSEWRDVLKKKQGVL  119 (514)
Q Consensus        85 ~~~~~~~~~~~~~~----~~~~~q~~~~~~v~~e~~~~~  119 (514)
                      ..++..+....+..    .+.+.|+.+|+|||+|||+++
T Consensus         6 ~~VtFeDVaV~Fs~EEW~~Ld~~Qk~LyrdVm~Eny~~l   44 (64)
T d1v65a_           6 SGVTYDDVHMNFTEEEWDLLDSSQKRLYEEVMLETYQNL   44 (64)
T ss_dssp             SCCCCCCCTTCCCHHHHHTSCHHHHHHHHHHHHHTTTSC
T ss_pred             CCEEEeEEEEEcCHHHHhCcCHHHHHHHHHhHHHHhhhh
Confidence            33455555554432    345678899999999999954

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.94  E-value=0.0094  Score=30.40  Aligned_cols=20  Identities=20%  Similarity=0.715  Sum_probs=8.7

Q ss_pred             cccCccccccCCHHHHHHHH
Q psy2973         336 FQCRICDKILSNIQGIRRHM  355 (514)
Q Consensus       336 ~~C~~C~~~f~~~~~l~~H~  355 (514)
                      |+|..|...|..+..|..||
T Consensus         3 ykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           3 YKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             EECSSSCCEESSHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            44444444444444444444

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.011  Score=31.22  Aligned_cols=24  Identities=25%  Similarity=0.560  Sum_probs=14.3

Q ss_pred             ccccccccccCChHHHHHHHHhhc
Q psy2973         428 WKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      -+|+.|.++.++.++|+.|.|+|-
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            356666666666666666666553

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.06  E-value=0.022  Score=29.89  Aligned_cols=24  Identities=29%  Similarity=0.618  Sum_probs=17.0

Q ss_pred             eeccCCCcccccHHHHHHHHHHhh
Q psy2973         197 FKCEVCPMKFHRQVSLKKHVEAVH  220 (514)
Q Consensus       197 ~~C~~C~~~f~~~~~l~~H~~~~H  220 (514)
                      |+|+.|+-....+++|+.|++..|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            667777777777777777776555

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.95  E-value=0.017  Score=33.66  Aligned_cols=28  Identities=32%  Similarity=0.605  Sum_probs=24.1

Q ss_pred             CCcccc--cccccccCChHHHHHHHHhhcC
Q psy2973         425 YKAWKC--EKCDMRFVTNKNLKRHMKVHEK  452 (514)
Q Consensus       425 ~k~~~C--~~C~~~F~~~~~L~~H~~~H~~  452 (514)
                      .+||.|  +-|+.+|.+...|..|...|.-
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhee
Confidence            389999  6699999999999999988863

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.013  Score=34.11  Aligned_cols=28  Identities=29%  Similarity=0.524  Sum_probs=19.7

Q ss_pred             CCCccccc--ccccccCChHHHHHhhhhcc
Q psy2973         278 GDVKYTCT--YCEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       278 ~~~~~~C~--~C~~~f~~~~~L~~H~~~H~  305 (514)
                      .++||.|.  -|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            36777774  47777777777777776663

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.88  E-value=0.027  Score=28.78  Aligned_cols=24  Identities=29%  Similarity=0.769  Sum_probs=17.7

Q ss_pred             eeccCCCcccccHHHHHHHHHHhh
Q psy2973         197 FKCEVCPMKFHRQVSLKKHVEAVH  220 (514)
Q Consensus       197 ~~C~~C~~~f~~~~~l~~H~~~~H  220 (514)
                      |.|+.|-+.|..+.++..|+..+|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            677777777777777777775555

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.78  E-value=0.023  Score=29.82  Aligned_cols=24  Identities=25%  Similarity=0.739  Sum_probs=14.9

Q ss_pred             cccCccccccCCHHHHHHHHHHhc
Q psy2973         336 FQCRICDKILSNIQGIRRHMENMH  359 (514)
Q Consensus       336 ~~C~~C~~~f~~~~~l~~H~~~~H  359 (514)
                      |+|+.|+.....++.|..|+++.|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            556666666666666666665555

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.71  E-value=0.031  Score=29.17  Aligned_cols=22  Identities=36%  Similarity=0.815  Sum_probs=12.8

Q ss_pred             CcccCcCCcccCChHHHHHHHH
Q psy2973         369 PFQCNDCGSTFRLKRHLNSHIN  390 (514)
Q Consensus       369 ~~~C~~C~~~f~~~~~L~~H~~  390 (514)
                      ||+|..||+.+-.+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4556666666666666665543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.70  E-value=0.029  Score=28.66  Aligned_cols=24  Identities=25%  Similarity=0.649  Sum_probs=13.3

Q ss_pred             cccCcCCcccCChHHHHHHHHhhc
Q psy2973         370 FQCNDCGSTFRLKRHLNSHINRLH  393 (514)
Q Consensus       370 ~~C~~C~~~f~~~~~L~~H~~~~h  393 (514)
                      |.|+.|-+.|..+.++..|++..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            455555555555555555555443

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.62  E-value=0.02  Score=29.95  Aligned_cols=20  Identities=30%  Similarity=0.773  Sum_probs=10.0

Q ss_pred             cccccccccccCChHHHHHH
Q psy2973         427 AWKCEKCDMRFVTNKNLKRH  446 (514)
Q Consensus       427 ~~~C~~C~~~F~~~~~L~~H  446 (514)
                      ||+|..||+.+-.+.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            34455555555555555544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.02  Score=35.03  Aligned_cols=26  Identities=23%  Similarity=0.474  Sum_probs=22.7

Q ss_pred             CcccccccccccCChHHHHHHHHhhc
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      ..|.|..|++.|+....|++|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35889999999999999999988874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.023  Score=32.38  Aligned_cols=24  Identities=21%  Similarity=0.481  Sum_probs=18.9

Q ss_pred             cccccccccCHHHHHHhhhhhhCC
Q psy2973         485 CKSCGKRYSSIYVLRNHVKSCYGQ  508 (514)
Q Consensus       485 C~~C~~~f~~~~~l~~H~~~h~ge  508 (514)
                      |+-=++.|.....|..|||+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333356788999999999999987

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.42  E-value=0.029  Score=31.44  Aligned_cols=25  Identities=28%  Similarity=0.788  Sum_probs=14.0

Q ss_pred             cccccccccccCHHHHHHhhhhhhC
Q psy2973         483 TTCKSCGKRYSSIYVLRNHVKSCYG  507 (514)
Q Consensus       483 ~~C~~C~~~f~~~~~l~~H~~~h~g  507 (514)
                      |.|..||+.|+....+..|-.++.|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            4555555555555555555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.08  Score=32.31  Aligned_cols=25  Identities=24%  Similarity=0.639  Sum_probs=18.7

Q ss_pred             cccCCcCCCcCCCHHHHHHHHHhcC
Q psy2973         309 TSKCSVCDRLYKSDYLRRKHERSHS  333 (514)
Q Consensus       309 ~~~C~~C~~~f~~~~~l~~H~~~h~  333 (514)
                      .|.|..|++.|.....|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4677778888888777777777664

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.54  E-value=0.068  Score=29.57  Aligned_cols=20  Identities=25%  Similarity=0.677  Sum_probs=11.1

Q ss_pred             ccccccccccCChHHHHHHH
Q psy2973         428 WKCEKCDMRFVTNKNLKRHM  447 (514)
Q Consensus       428 ~~C~~C~~~F~~~~~L~~H~  447 (514)
                      |.|.-||-+|++.+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            55555555555555555553

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.31  E-value=0.16  Score=28.30  Aligned_cols=23  Identities=30%  Similarity=0.687  Sum_probs=13.7

Q ss_pred             cccCccccccCCHHHHHHHHHHh
Q psy2973         336 FQCRICDKILSNIQGIRRHMENM  358 (514)
Q Consensus       336 ~~C~~C~~~f~~~~~l~~H~~~~  358 (514)
                      |.|..|++.|..+..+.+|....
T Consensus         5 fvcskcgktftrrntm~rha~nc   27 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNC   27 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHC
T ss_pred             eeecccccchhcchHHHHHhhhc
Confidence            55666666666666666665443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.47  E-value=0.097  Score=27.58  Aligned_cols=20  Identities=25%  Similarity=0.645  Sum_probs=16.8

Q ss_pred             ccccccCChHHHHHHHHhhc
Q psy2973         432 KCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       432 ~C~~~F~~~~~L~~H~~~H~  451 (514)
                      .|++.|.+.++|+.|+-+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48899999999999988873

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.92  E-value=0.19  Score=26.71  Aligned_cols=25  Identities=24%  Similarity=0.762  Sum_probs=17.2

Q ss_pred             ccccccccccCChHHHHHHHHhhcC
Q psy2973         397 LNCVHCQAIFTNKQRLNYHILTKHS  421 (514)
Q Consensus       397 ~~C~~C~~~f~~~~~L~~H~~~~H~  421 (514)
                      |.|..||+...+...++.|+...|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            5677777777777777777666554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.21  E-value=0.19  Score=27.19  Aligned_cols=28  Identities=25%  Similarity=0.582  Sum_probs=22.0

Q ss_pred             Ccccc--cccccccCChHHHHHHHHhhcCC
Q psy2973         426 KAWKC--EKCDMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       426 k~~~C--~~C~~~F~~~~~L~~H~~~H~~~  453 (514)
                      +.|.|  +.|+..|+....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45777  45888888888888888888774

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.06  E-value=0.28  Score=26.00  Aligned_cols=27  Identities=37%  Similarity=0.799  Sum_probs=19.9

Q ss_pred             ccccCccccccCCHHHHHHHHHHhcCC
Q psy2973         335 IFQCRICDKILSNIQGIRRHMENMHNS  361 (514)
Q Consensus       335 ~~~C~~C~~~f~~~~~l~~H~~~~H~~  361 (514)
                      .|.|..|++...+...++.|+...|+.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            367777888888888888887766653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.01  E-value=0.12  Score=29.28  Aligned_cols=20  Identities=25%  Similarity=0.214  Sum_probs=16.0

Q ss_pred             ccccCChHHHHHHHHhhcCC
Q psy2973         434 DMRFVTNKNLKRHMKVHEKN  453 (514)
Q Consensus       434 ~~~F~~~~~L~~H~~~H~~~  453 (514)
                      ++.|.....|..|||+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            35688888888999988875

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.83  E-value=0.14  Score=28.24  Aligned_cols=21  Identities=29%  Similarity=0.531  Sum_probs=18.7

Q ss_pred             ccccccccccCChhhHHHHhc
Q psy2973         459 SSCNECGKQYKWESFLQKHKK  479 (514)
Q Consensus       459 ~~C~~C~~~f~~~~~L~~H~~  479 (514)
                      |.|+-||-.|++.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            789999999999999999865

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.24  E-value=0.25  Score=26.67  Aligned_cols=26  Identities=27%  Similarity=0.685  Sum_probs=21.3

Q ss_pred             cccc--cccccccCHHHHHHhhhhhhCC
Q psy2973         483 TTCK--SCGKRYSSIYVLRNHVKSCYGQ  508 (514)
Q Consensus       483 ~~C~--~C~~~f~~~~~l~~H~~~h~ge  508 (514)
                      |.|+  .|+..|.....|..|+-.|+||
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5564  6888888888899999888886

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.23  E-value=0.21  Score=25.83  Aligned_cols=19  Identities=42%  Similarity=0.746  Sum_probs=11.5

Q ss_pred             cccccCChHHHHHhhhhcc
Q psy2973         287 CEKSFLYKKSLKHHLFVHS  305 (514)
Q Consensus       287 C~~~f~~~~~L~~H~~~H~  305 (514)
                      |++.|.....|+.|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666665553

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=84.09  E-value=0.32  Score=25.13  Aligned_cols=24  Identities=33%  Similarity=0.664  Sum_probs=16.9

Q ss_pred             ccc--cccccccCChHHHHHHHHhhc
Q psy2973         428 WKC--EKCDMRFVTNKNLKRHMKVHE  451 (514)
Q Consensus       428 ~~C--~~C~~~F~~~~~L~~H~~~H~  451 (514)
                      |.|  ..|+++|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            445  347788888778887777764

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.67  E-value=0.16  Score=34.30  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=20.1

Q ss_pred             CcccccccccccCChHHHHHHHHh
Q psy2973         426 KAWKCEKCDMRFVTNKNLKRHMKV  449 (514)
Q Consensus       426 k~~~C~~C~~~F~~~~~L~~H~~~  449 (514)
                      ..|.|..|++.|.+..+|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348899999999999999999774

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.41  E-value=0.23  Score=33.50  Aligned_cols=25  Identities=16%  Similarity=0.267  Sum_probs=21.8

Q ss_pred             cccccccccccCChhhHHHHhcccc
Q psy2973         458 DSSCNECGKQYKWESFLQKHKKICT  482 (514)
Q Consensus       458 ~~~C~~C~~~f~~~~~L~~H~~~h~  482 (514)
                      .|.|..|++.|.+...|..|.++..
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ksKk   39 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRSKD   39 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             EEecccccCccCCHHHHHHHHcccH
Confidence            4889999999999999999988743

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.22  E-value=0.16  Score=33.71  Aligned_cols=11  Identities=36%  Similarity=0.951  Sum_probs=4.4

Q ss_pred             ccCCcCCCcCC
Q psy2973         310 SKCSVCDRLYK  320 (514)
Q Consensus       310 ~~C~~C~~~f~  320 (514)
                      |.|+.|++.|+
T Consensus        15 y~Cp~C~~~ys   25 (62)
T d1vd4a_          15 FKCPVCSSTFT   25 (62)
T ss_dssp             EECSSSCCEEE
T ss_pred             eECCCCCCCcc
Confidence            34444444433

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.01  E-value=0.42  Score=25.06  Aligned_cols=20  Identities=20%  Similarity=0.434  Sum_probs=13.3

Q ss_pred             cccccccCHHHHHHhhhhhh
Q psy2973         487 SCGKRYSSIYVLRNHVKSCY  506 (514)
Q Consensus       487 ~C~~~f~~~~~l~~H~~~h~  506 (514)
                      -|.+.|...+++++|+.+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            36677777777777776653

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.59  E-value=0.55  Score=24.75  Aligned_cols=21  Identities=43%  Similarity=0.629  Sum_probs=13.5

Q ss_pred             ccccccCChHHHHHHHHhhcC
Q psy2973         401 HCQAIFTNKQRLNYHILTKHS  421 (514)
Q Consensus       401 ~C~~~f~~~~~L~~H~~~~H~  421 (514)
                      .||+.|++.+.|..|.+..|.
T Consensus         7 gc~kifsnrqylnhh~kyqh~   27 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKYQHI   27 (30)
T ss_dssp             TTCCEESSHHHHHHHHHHGGG
T ss_pred             CchhhhccHHHHHhHHHHHHh
Confidence            467777777777766665543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.33  E-value=0.73  Score=27.81  Aligned_cols=28  Identities=32%  Similarity=0.629  Sum_probs=20.8

Q ss_pred             CCCCcccCcCCcccCChHHHHHHHHhhc
Q psy2973         366 TERPFQCNDCGSTFRLKRHLNSHINRLH  393 (514)
Q Consensus       366 ~~~~~~C~~C~~~f~~~~~L~~H~~~~h  393 (514)
                      .+.|-.|++|+.......+|++|+.-.|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            3567778888888888888888876544