Psyllid ID: psy3216

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MRLFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTNDQASFFSSNNILITSNSLHKLDDLNTSHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTPDPSSTTTPDDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYASRLAEVELRTRSNSTPDSEDEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLNPTLQTRSVTASQLATDSPAKMNGHCLDSPNGK
cHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHcccccccccccccHHHHHHHHHHcccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
ccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHcccccccHHHHccccccEEEEccccEEEcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHccHHHHHHHHHHccccccccEEcccccEEcHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccEEEEEEEHHHHHHHHcccHHHHHcccccHHHHHHHHHHccccccEcHHHHHHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccEEcccccccEEEEEEEccHccccHHHHHcEEcccccccccccccEEEEccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
MRLFQKSLDDLSNRLSAAESVKntwtsvsdasqIPELREYLKKFSERLTPLQRAledtndqasffssnnilitsnslhklddlntshhtettswdhpkMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDthglraqndklldvsDMVVLEEENHMLQAEYERlrgsrttpdpsstttpddLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLeskdrsssrFIFQNLFRliadpnrlvDQRKLGLLLHDCIQLPRqlgevasfggsniepsAVHFLSWLqqepqsivwlpVLHRLSAAESAKHQAkcnickecpiigfryrclkcfnfdmcqtcffqgkkaknhklthpmqeycttttsgedvRDFTRALRNKFkskryfkkhprvgylpvqtvlegdalespapspqhshtigphdmHSRLEMYASRLAEVELrtrsnstpdsedeHQLIAQYCHslnggdivpvprspvqvmHAIDADQREELEVMISVLnptlqtrsvtasqlatdspakmnghcldspngk
MRLFQKSLDDLSNRLSAaesvkntwtsvsdasqiPELREYLKKFSERLTPLQRALEDTNDQASFFSSNNILITSNSLHKLDDLNTSHHtettswdhpKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFdthglraqndklLDVSDMVVLEEENHMLQAEyerlrgsrttpdpsstttpddLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSqleskdrssSRFIFQNLfrliadpnrLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKaknhklthpmqeycttttsgedvrdFTRALRNkfkskryfkkhprvgyLPVQTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYASRLAEVELRTRsnstpdsedEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLnptlqtrsvtasqlatdspakmnghcldspngk
MRLFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTNDQAsffssnnilitsnslHKLDDLNTSHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGsrttpdpsstttpddLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYASRLAEVELRTRSNSTPDSEDEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLNPTLQTRSVTASQLATDSPAKMNGHCLDSPNGK
***************************************************************FFSSNNILITSNSLHKL************SWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLE****************************************************************************RFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVL******************************************************LIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLN********************************
***FQKSLDDLSNRLSAAES************QIPELREYLKKFSERLTPLQRALEDTNDQA****************************TTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRA****LLDVSDMVVLEEENHMLQAEYERLRG********STTTPDDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTT************************************************************************************************************************************************************************
MRLFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTNDQASFFSSNNILITSNSLHKLDDLNTSHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERL***************DDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQL*********SSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSA********KCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDA*************IGPHDMHSRLEMYASRLAEVELR************HQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLNPTLQTRSVTASQLATDSPAKMNGHCLDSPNGK
MRLFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTN*QAS**SSNNILITSNSLHKLDDLNTSHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTPDPSSTTTPDDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSP**********************************PDSEDEHQLIAQYCHSLNGG*I*PVPRSPVQVMHAIDADQREELEVMISVLNPTLQTRSVTASQLA******************
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MRLFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTNDQASFFSSNNILITSNSLHKLDDLNTSHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDxxxxxxxxxxxxxxxxxxxxxRTTPDPSSTTTPDDLEMAAEAKLLRQHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYASRLAEVELRTRSNSTPDSEDEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVLNPTLQTRSVTASQLATDSPAKMNGHCLDSPNGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query547 2.2.26 [Sep-21-2011]
Q9VDW6 3598 Dystrophin, isoforms A/C/ no N/A 0.904 0.137 0.504 1e-152
Q0KI50 1854 Dystrophin, isoform D OS= no N/A 0.890 0.262 0.510 1e-152
Q9VDW3 1669 Dystrophin, isoform B OS= no N/A 0.890 0.291 0.510 1e-152
Q7YU29 1051 Dystrophin, isoform E OS= no N/A 0.890 0.463 0.509 1e-151
P11532 3685 Dystrophin OS=Homo sapien no N/A 0.888 0.131 0.426 1e-122
P11531 3678 Dystrophin OS=Mus musculu yes N/A 0.888 0.132 0.426 1e-122
Q5GN48 3674 Dystrophin OS=Sus scrofa yes N/A 0.888 0.132 0.426 1e-121
P46939 3433 Utrophin OS=Homo sapiens no N/A 0.872 0.138 0.429 1e-120
O97592 3680 Dystrophin OS=Canis famil yes N/A 0.888 0.132 0.423 1e-120
P11533 3660 Dystrophin OS=Gallus gall no N/A 0.872 0.130 0.417 1e-115
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/F/G/H OS=Drosophila melanogaster GN=Dys PE=1 SV=3 Back     alignment and function desciption
 Score =  540 bits (1391), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 310/614 (50%), Positives = 375/614 (61%), Gaps = 119/614 (19%)

Query: 1    MRLFQKSLDDLSNRLSAAESVKNTW---TSVSDAS----QIPELREYLKKFSERL----- 48
            MR FQK L+DLS+R++ AE  K +W   +SV +A+    Q+  LR+ +   S  L     
Sbjct: 2717 MRQFQKILEDLSSRVALAEQTKTSWLPPSSVGEANEQMQQLQRLRDKMTTASALLDDCNE 2776

Query: 49   -------------TPLQRALEDTNDQASFF---------------------SSNNILITS 74
                         TP    LED N +                         + ++   TS
Sbjct: 2777 QQSFFTANQVLVPTPCLSKLEDLNTRMKLLQIAMDERQKVLCQAGAQQTHENGDDGRTTS 2836

Query: 75   NS--LHKLDDLNTS-------------------HHTETTSWDHPKMIQLMNSLSELNEVR 113
            NS  +  L +L  S                   H  ETT WDHP+MI+LM  L++LNE+R
Sbjct: 2837 NSGTIGPLPNLGQSVKPPWERATTAANVPYYIDHERETTHWDHPEMIELMKGLADLNEIR 2896

Query: 114  FSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQ 173
            FSAYRTA+KLR+VQKRL LD +++  A E+FD HGLRAQNDKL+D+ DM  +        
Sbjct: 2897 FSAYRTAMKLRSVQKRLALDRISMSTACESFDRHGLRAQNDKLIDIPDMTTV-------- 2948

Query: 174  AEYERLRGSRTTPDPSSTTTPDDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQ 233
                 L     T D    T   DL +     +L  +  +   ++++L      +      
Sbjct: 2949 -----LHSLYVTIDKIDLTLMLDLAINW---ILNVYDSQRTGQIRVLSFKVGLVLLCKGH 3000

Query: 234  LESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPS 293
            LE K        ++ LFRL+AD +R  DQR+LGLLLHDCIQ+PRQLGEVA+FGGSNIEPS
Sbjct: 3001 LEEK--------YRYLFRLVADTDRRADQRRLGLLLHDCIQVPRQLGEVAAFGGSNIEPS 3052

Query: 294  A------------------------VHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKC 329
                                      HFL WLQ EPQS+VWLPVLHRL+AAE+AKHQAKC
Sbjct: 3053 VRSCLEQAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAKC 3112

Query: 330  NICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFT 389
            NICKE PI+GFRYRCLKCFNFDMCQ CFF G+ AKNHKLTHPM EYCTTTTS EDVRDFT
Sbjct: 3113 NICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDFT 3172

Query: 390  RALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYAS 449
            RAL+NKFKS++YFKKHPRVGYLPVQ+VLEGDALESPAPSPQH+     +DMHSRLEMYAS
Sbjct: 3173 RALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQLQNDMHSRLEMYAS 3232

Query: 450  RLAEVEL-RTRSNSTPDSEDEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELE 508
            RLA+VE   T SNSTPDS+DEHQLIAQYC +L G      P+SPVQVM A+DA+QREELE
Sbjct: 3233 RLAQVEYGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREELE 3292

Query: 509  VMISVL---NPTLQ 519
             +I  L   N  LQ
Sbjct: 3293 AIIRDLEEENANLQ 3306
Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. Both det and Dg are required for maintenance of early dpp signaling in the presumptive crossvein. Isoform A is not required to maintain muscle integrity, but plays a role in neuromuscular homeostasis by regulating neurotransmitter release. May play a role in anchoring the cytoskeleton to the plasma membrane.
Drosophila melanogaster (taxid: 7227)
>sp|Q0KI50|DMDD_DROME Dystrophin, isoform D OS=Drosophila melanogaster GN=Dys PE=1 SV=1 Back     alignment and function description
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B OS=Drosophila melanogaster GN=Dys PE=1 SV=3 Back     alignment and function description
>sp|Q7YU29|DMDE_DROME Dystrophin, isoform E OS=Drosophila melanogaster GN=Dys PE=1 SV=1 Back     alignment and function description
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3 Back     alignment and function description
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3 Back     alignment and function description
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1 Back     alignment and function description
>sp|P46939|UTRO_HUMAN Utrophin OS=Homo sapiens GN=UTRN PE=1 SV=2 Back     alignment and function description
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1 Back     alignment and function description
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
383862415 4129 PREDICTED: dystrophin, isoforms A/C/F/G/ 0.954 0.126 0.592 0.0
380022121 4111 PREDICTED: LOW QUALITY PROTEIN: dystroph 0.954 0.126 0.587 0.0
328792482 4079 PREDICTED: dystrophin, isoforms A/C/F/G/ 0.956 0.128 0.588 0.0
350413107 3658 PREDICTED: dystrophin, isoforms A/C/F/G/ 0.954 0.142 0.584 0.0
340709163 4082 PREDICTED: LOW QUALITY PROTEIN: dystroph 0.954 0.127 0.584 0.0
350413111 4082 PREDICTED: dystrophin, isoforms A/C/F/G/ 0.954 0.127 0.584 0.0
350413109 3622 PREDICTED: dystrophin, isoforms A/C/F/G/ 0.954 0.144 0.584 0.0
322785410 761 hypothetical protein SINV_11293 [Solenop 0.954 0.685 0.587 0.0
307212200 733 Dystrophin, isoforms A/C/F/G [Harpegnath 0.932 0.695 0.582 0.0
332029826 733 Dystrophin, isoforms A/C/F/G/H [Acromyrm 0.932 0.695 0.582 0.0
>gi|383862415|ref|XP_003706679.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Megachile rotundata] Back     alignment and taxonomy information
 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/616 (59%), Positives = 427/616 (69%), Gaps = 94/616 (15%)

Query: 3    LFQKSLDDLSNRLSAAESVKNTWTSVSDASQIPELREYLKKFSERLTPLQRALEDTNDQA 62
            +FQKSL+DLS+R++AAE++++ W + +DA++  EL E L+KF ERL P+QR +ED NDQA
Sbjct: 3384 VFQKSLEDLSSRMAAAEAIQSGWQNPNDANEATELLEQLQKFGERLVPIQRNIEDANDQA 3443

Query: 63   SFFSSNNILITSNSLHKLDDLNT------------------------------------- 85
            S F+S++++++   L KL+DLNT                                     
Sbjct: 3444 SVFASSSVIVSHALLAKLEDLNTRWKVLQVAVDERYKLLSGFGKDGSTPGSQAFLASSVE 3503

Query: 86   ----------------SHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKR 129
                            +H +ETT WDHPKMI+LM+SL++LNEVRFSAYRTA+KLRTVQKR
Sbjct: 3504 PPWERALTPAKVPYYINHQSETTHWDHPKMIELMSSLADLNEVRFSAYRTAMKLRTVQKR 3563

Query: 130  LCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTPDPS 189
            LCLDLL+L  A+E FD+HGLRAQNDKL+D+ DMV +      L + YE +    T  +P+
Sbjct: 3564 LCLDLLSLSTALEQFDSHGLRAQNDKLIDIPDMVTV------LTSLYEVI----TADNPT 3613

Query: 190  STTTPDDLEMAAEAKLLRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNL 249
              + P  +++A    LL  +  +   ++++L      +      LE K        ++ L
Sbjct: 3614 QVSVPLCIDLAINW-LLNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEK--------YRYL 3664

Query: 250  FRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPS---------------- 293
            FRLIADPNRLVDQRKLGLLLHDCIQ+PRQLGEVA+FGGSNIEPS                
Sbjct: 3665 FRLIADPNRLVDQRKLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCFEKAGKDKNEIE 3724

Query: 294  AVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAKCNICKECPIIGFRYRCLKCFNFDMC 353
            AVHFLSWLQQEPQS+VWLPVLHRLSAAESAKHQAKCNICKE PI GFRYRCLKCFNFDMC
Sbjct: 3725 AVHFLSWLQQEPQSMVWLPVLHRLSAAESAKHQAKCNICKEYPITGFRYRCLKCFNFDMC 3784

Query: 354  QTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPV 413
            Q CFF G+KAKNHKLTHPMQEYCT TTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPV
Sbjct: 3785 QNCFFSGRKAKNHKLTHPMQEYCTATTSGEDVRDFTRALRNKFKSKRYFKKHPRVGYLPV 3844

Query: 414  QTVLEGDALESPAPSPQHSHTIGPHDMHSRLEMYASRLAEVEL-RTRSNSTPDSEDEHQL 472
            QTVLEGDALESPAPSPQHS      DMHSRLEMYASRLAEVEL RTRSNSTPDS+DEHQL
Sbjct: 3845 QTVLEGDALESPAPSPQHSSL--SQDMHSRLEMYASRLAEVELSRTRSNSTPDSDDEHQL 3902

Query: 473  IAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREELEVMISVL---NPTLQTRSVTASQLA 529
            IA YC SLNGGD V VPRSPVQVM AIDA+QREELE MI  L   N TLQ          
Sbjct: 3903 IAHYCQSLNGGDNVNVPRSPVQVMAAIDAEQREELEAMIRELEEENATLQAEYERLRSKQ 3962

Query: 530  TDSPAKMNGHCLDSPN 545
            T      +GH    P+
Sbjct: 3963 TPGSTPEDGHGNRQPD 3978

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|380022121|ref|XP_003694902.1| PREDICTED: LOW QUALITY PROTEIN: dystrophin, isoforms A/C/F/G/H-like [Apis florea] Back     alignment and taxonomy information
>gi|328792482|ref|XP_003251732.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like [Apis mellifera] Back     alignment and taxonomy information
>gi|350413107|ref|XP_003489881.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 1 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340709163|ref|XP_003393182.1| PREDICTED: LOW QUALITY PROTEIN: dystrophin, isoforms A/C/F/G/H-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350413111|ref|XP_003489883.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 3 [Bombus impatiens] Back     alignment and taxonomy information
>gi|350413109|ref|XP_003489882.1| PREDICTED: dystrophin, isoforms A/C/F/G/H-like isoform 2 [Bombus impatiens] Back     alignment and taxonomy information
>gi|322785410|gb|EFZ12083.1| hypothetical protein SINV_11293 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307212200|gb|EFN88034.1| Dystrophin, isoforms A/C/F/G [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|332029826|gb|EGI69695.1| Dystrophin, isoforms A/C/F/G/H [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query547
FB|FBgn0260003 3598 Dys "Dystrophin" [Drosophila m 0.504 0.076 0.657 6.8e-147
UNIPROTKB|H0Y304 1386 DMD "Dystrophin" [Homo sapiens 0.740 0.292 0.511 5.4e-115
UNIPROTKB|F8VX32 1230 DMD "Dystrophin" [Homo sapiens 0.740 0.329 0.511 5.4e-115
UNIPROTKB|J9P0A9 947 UTRN "Uncharacterized protein" 0.510 0.294 0.570 6.2e-112
UNIPROTKB|H0Y8D5 1424 DMD "Dystrophin" [Homo sapiens 0.747 0.287 0.494 1e-111
UNIPROTKB|E7EQS5 1225 DMD "Dystrophin" [Homo sapiens 0.747 0.333 0.494 1e-111
UNIPROTKB|E7ESB2 1243 DMD "Dystrophin" [Homo sapiens 0.747 0.329 0.494 1e-111
UNIPROTKB|F1S733 772 UTRN "Uncharacterized protein" 0.517 0.366 0.552 1e-109
UNIPROTKB|Q5T097 988 UTRN "Utrophin" [Homo sapiens 0.517 0.286 0.555 1.3e-109
ZFIN|ZDB-GENE-010426-1 3633 dmd "dystrophin" [Danio rerio 0.747 0.112 0.494 4.9e-109
FB|FBgn0260003 Dys "Dystrophin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 939 (335.6 bits), Expect = 6.8e-147, Sum P(4) = 6.8e-147
 Identities = 188/286 (65%), Positives = 215/286 (75%)

Query:   269 LHDCIQLPRQLGEVASFGGSNIEPSAVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQAK 328
             +  C++    + + A  G  +I     HFL WLQ EPQS+VWLPVLHRL+AAE+AKHQAK
Sbjct:  3053 VRSCLE-QAGISQEAIDGNQDISIELQHFLGWLQHEPQSLVWLPVLHRLAAAEAAKHQAK 3111

Query:   329 CNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDF 388
             CNICKE PI+GFRYRCLKCFNFDMCQ CFF G+ AKNHKLTHPM EYCTTTTS EDVRDF
Sbjct:  3112 CNICKEYPIVGFRYRCLKCFNFDMCQKCFFFGRNAKNHKLTHPMHEYCTTTTSTEDVRDF 3171

Query:   389 TRALRNKFKSKRYFKKHPRVGYLPVQTVLEGDALESPAPSPQHS-HTIGPHDMHSRLEMY 447
             TRAL+NKFKS++YFKKHPRVGYLPVQ+VLEGDALESPAPSPQH+ H +  +DMHSRLEMY
Sbjct:  3172 TRALKNKFKSRKYFKKHPRVGYLPVQSVLEGDALESPAPSPQHTTHQL-QNDMHSRLEMY 3230

Query:   448 ASRLAEVELR-TRSNSTPDSEDEHQLIAQYCHSLNGGDIVPVPRSPVQVMHAIDADQREE 506
             ASRLA+VE   T SNSTPDS+DEHQLIAQYC +L G      P+SPVQVM A+DA+QREE
Sbjct:  3231 ASRLAQVEYGGTGSNSTPDSDDEHQLIAQYCQALPGTSNGSAPKSPVQVMAAMDAEQREE 3290

Query:   507 LEVMISVL---NPTLQTR-SVTASQLATDSPAKMNG--HCLDSPNG 546
             LE +I  L   N  LQ       S+  +  P   NG  H   S  G
Sbjct:  3291 LEAIIRDLEEENANLQAEYQQLCSKEQSGMPEDSNGMQHSSSSMTG 3336
GO:0008586 "imaginal disc-derived wing vein morphogenesis" evidence=IMP
GO:0005856 "cytoskeleton" evidence=ISS
GO:0005198 "structural molecule activity" evidence=ISS
GO:0008307 "structural constituent of muscle" evidence=ISS
GO:0016010 "dystrophin-associated glycoprotein complex" evidence=ISS;NAS;IPI
GO:0008092 "cytoskeletal protein binding" evidence=ISS
GO:0003779 "actin binding" evidence=ISS
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0007517 "muscle organ development" evidence=ISS;IMP
GO:0005200 "structural constituent of cytoskeleton" evidence=ISS
GO:0007274 "neuromuscular synaptic transmission" evidence=IDA
GO:0048172 "regulation of short-term neuronal synaptic plasticity" evidence=IDA
GO:0046716 "muscle cell homeostasis" evidence=IMP
GO:0050699 "WW domain binding" evidence=IPI
GO:0030010 "establishment of cell polarity" evidence=IMP
GO:0007474 "imaginal disc-derived wing vein specification" evidence=IMP
GO:0046928 "regulation of neurotransmitter secretion" evidence=IDA
GO:0005737 "cytoplasm" evidence=IDA
UNIPROTKB|H0Y304 DMD "Dystrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F8VX32 DMD "Dystrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|J9P0A9 UTRN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|H0Y8D5 DMD "Dystrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E7EQS5 DMD "Dystrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E7ESB2 DMD "Dystrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S733 UTRN "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q5T097 UTRN "Utrophin" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-010426-1 dmd "dystrophin" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
pfam0906989 pfam09069, efhand_2, EF-hand 3e-31
cd0233449 cd02334, ZZ_dystrophin, Zinc finger, ZZ type 4e-30
pfam09068125 pfam09068, efhand_1, EF hand 2e-21
pfam0056946 pfam00569, ZZ, Zinc finger, ZZ type 1e-19
smart0029144 smart00291, ZnF_ZZ, Zinc-binding domain, present i 6e-16
cd0224946 cd02249, ZZ, Zinc finger, ZZ type 2e-12
cd0233849 cd02338, ZZ_PCMF_like, Zinc finger, ZZ type 2e-11
cd0233945 cd02339, ZZ_Mind_bomb, Zinc finger, ZZ type 5e-10
cd0233549 cd02335, ZZ_ADA2, Zinc finger, ZZ type 4e-08
cd0234043 cd02340, ZZ_NBR1_like, Zinc finger, ZZ type 5e-07
cd0234348 cd02343, ZZ_EF, Zinc finger, ZZ type 2e-06
cd0234549 cd02345, ZZ_dah, Zinc finger, ZZ type 2e-06
cd0234445 cd02344, ZZ_HERC2, Zinc finger, ZZ type 2e-06
cd0234148 cd02341, ZZ_ZZZ3, Zinc finger, ZZ type 3e-06
>gnl|CDD|149946 pfam09069, efhand_2, EF-hand Back     alignment and domain information 
 Score =  115 bits (291), Expect = 3e-31
 Identities = 50/84 (59%), Positives = 57/84 (67%), Gaps = 16/84 (19%)

Query: 249 LFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPS--------------A 294
           LF  I+D N L+DQRKLGLLLH+ +QLPRQ+GE ASFGG  IEPS               
Sbjct: 8   LFSQISDSNGLMDQRKLGLLLHEALQLPRQVGEGASFGG--IEPSVRSCFPQVGKPKIEL 65

Query: 295 VHFLSWLQQEPQSIVWLPVLHRLS 318
            HFL WL  EPQS+VWLPVLHRL+
Sbjct: 66  NHFLDWLMLEPQSLVWLPVLHRLA 89

Members of this family adopt a helix-loop-helix motif, as per other EF hand domains. However, since they do not contain the canonical pattern of calcium binding residues found in many EF hand domains, they do not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (pfam00397), enhancing dystroglycan binding. Length = 89
>gnl|CDD|239074 cd02334, ZZ_dystrophin, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|149945 pfam09068, efhand_1, EF hand Back     alignment and domain information
>gnl|CDD|144236 pfam00569, ZZ, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|197633 smart00291, ZnF_ZZ, Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>gnl|CDD|239069 cd02249, ZZ, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239078 cd02338, ZZ_PCMF_like, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239079 cd02339, ZZ_Mind_bomb, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239075 cd02335, ZZ_ADA2, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239080 cd02340, ZZ_NBR1_like, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239083 cd02343, ZZ_EF, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239085 cd02345, ZZ_dah, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239084 cd02344, ZZ_HERC2, Zinc finger, ZZ type Back     alignment and domain information
>gnl|CDD|239081 cd02341, ZZ_ZZZ3, Zinc finger, ZZ type Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 547
KOG4286|consensus 966 100.0
KOG4301|consensus434 100.0
PF09068127 EF-hand_2: EF hand; InterPro: IPR015153 Like other 100.0
PF0906990 EF-hand_3: EF-hand; InterPro: IPR015154 Like other 99.86
cd0233449 ZZ_dystrophin Zinc finger, ZZ type. Zinc finger pr 99.71
cd0234549 ZZ_dah Zinc finger, ZZ type. Zinc finger present i 99.54
cd0234348 ZZ_EF Zinc finger, ZZ type. Zinc finger present in 99.52
cd0234445 ZZ_HERC2 Zinc finger, ZZ type. Zinc finger present 99.51
cd0233945 ZZ_Mind_bomb Zinc finger, ZZ type. Zinc finger pre 99.51
cd0233849 ZZ_PCMF_like Zinc finger, ZZ type. Zinc finger pre 99.51
cd0234148 ZZ_ZZZ3 Zinc finger, ZZ type. Zinc finger present 99.43
cd0234043 ZZ_NBR1_like Zinc finger, ZZ type. Zinc finger pre 99.4
cd0233549 ZZ_ADA2 Zinc finger, ZZ type. Zinc finger present 99.36
PF0056946 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc 99.33
cd0224946 ZZ Zinc finger, ZZ type. Zinc finger present in dy 99.26
cd0234243 ZZ_UBA_plant Zinc finger, ZZ type. Zinc finger pre 99.25
smart0029144 ZnF_ZZ Zinc-binding domain, present in Dystrophin, 99.19
KOG1280|consensus 381 99.07
KOG4582|consensus278 99.07
cd0233741 ZZ_CBP Zinc finger, ZZ type. Zinc finger present i 98.61
KOG0457|consensus 438 98.17
cd0233645 ZZ_RSC8 Zinc finger, ZZ type. Zinc finger present 97.99
COG5114 432 Histone acetyltransferase complex SAGA/ADA, subuni 97.59
PF00435105 Spectrin: Spectrin repeat; InterPro: IPR002017 Spe 97.2
smart00150101 SPEC Spectrin repeats. 97.13
KOG4301|consensus 434 96.59
cd00176213 SPEC Spectrin repeats, found in several proteins i 96.21
cd00176213 SPEC Spectrin repeats, found in several proteins i 95.1
KOG4286|consensus966 94.21
PF0764930 C1_3: C1-like domain; InterPro: IPR011424 This sho 92.35
KOG0044|consensus193 88.78
PF0310730 C1_2: C1 domain; InterPro: IPR004146 This short do 85.25
>KOG4286|consensus Back     alignment and domain information 
Probab=100.00  E-value=6.7e-125  Score=1014.26  Aligned_cols=486  Identities=51%  Similarity=0.880  Sum_probs=466.0

Q ss_pred             ChhHHHHHHHHHHHHHHHHHhhccCCCCCC--CCchHHHHHHHHHHHhhhhHhHHHHhhhhhhhcccccCCcccCcchhh
Q psy3216           1 MRLFQKSLDDLSNRLSAAESVKNTWTSVSD--ASQIPELREYLKKFSERLTPLQRALEDTNDQASFFSSNNILITSNSLH   78 (547)
Q Consensus         1 ~~~lq~am~el~~~l~~aE~~~~~W~pv~d--~d~l~~~i~~~k~f~e~l~pl~~~v~~~nd~a~~l~~~~v~Ls~~~~~   78 (547)
                      |++||.+||||+..|++||.++++|+||||  ||+|++||++++.|+++|+|++..|++|||+|++|++.||+||+.+..
T Consensus       229 l~elq~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql~~~d~~ls~~~~~  308 (966)
T KOG4286|consen  229 LQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLDIQLSPYNLS  308 (966)
T ss_pred             HHHHHHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHhhhcccCCChhhHh
Confidence            578999999999999999999999999999  499999999999999999999999999999999999999999999999


Q ss_pred             hhhhccCC----------------------------------------------------CCCcccccCchhHHHHHHHH
Q psy3216          79 KLDDLNTS----------------------------------------------------HHTETTSWDHPKMIQLMNSL  106 (547)
Q Consensus        79 ~LedlN~R----------------------------------------------------h~~~~t~wdhp~~~~l~~~l  106 (547)
                      +|||+|+|                                                    |+|||||||||+|++|+++|
T Consensus       309 ~le~~n~rwk~Lq~SV~~rl~qlrna~~dfgp~sqhflsqsvq~pw~rais~nkvpyyinh~~q~t~wdhp~~tel~q~l  388 (966)
T KOG4286|consen  309 TLEDLNTRWKLLQVSVPDRLTQLRNAHRDFGPISQHFLSQSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTELYQSL  388 (966)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHhhccCcccchhccCccccchhhcccchhhhccchHHHHHHHHH
Confidence            99999998                                                    99999999999999999999


Q ss_pred             hhhccchhhHHHHHHHHHhHhHhhccccccHHHHHHHHhhCCCcccCCcccChhhhhhhHHhhHHHHHHHHHHhCCCCCC
Q psy3216         107 SELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTP  186 (547)
Q Consensus       107 ~~~n~Irfs~YRtA~KLR~lQk~~~l~lv~l~~~~~~f~~~~l~~~~~~~l~v~~~~~l~~~~~~L~~iY~~L~~~~~~p  186 (547)
                      +|||+|||+|||||||||+|||++|||+|++.++.+||++|+|+ +++..++|.+++++      |..+|++|..+    
T Consensus       389 ad~nnvKfsaYRtAmKlr~LQK~l~ldlv~ltl~l~if~~h~l~-~~~e~m~~~~~i~~------L~~~y~~l~e~----  457 (966)
T KOG4286|consen  389 ADLNNVKFSAYRTAMKLRRLQKALCLDLLSLSLALDALDQHNLK-QNDQPMDILQIINC------LTTIYDRLEQE----  457 (966)
T ss_pred             HHhcCeeehhHHHHHHHHHHHHHHHhccccHHHHHHHHHHhccc-ccCcCCCHHHHHHH------HHHHHHHHHHH----
Confidence            99999999999999999999999999999999999999999996 78999999999999      99999999988    


Q ss_pred             CCCCCCchhHHHHHHHHHHhh----cccCccccchhHHHHHHHHHHHhcccchhccccchhhhhhhhcccccCCCCcccH
Q psy3216         187 DPSSTTTPDDLEMAAEAKLLR----QHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQ  262 (547)
Q Consensus       187 ~~~~~~v~~~~dLllnawLL~----~r~Grl~~rm~Vls~k~~l~~Lc~~~L~dK~~~~~~~~~rylF~liad~~g~~~~  262 (547)
                      .+++++|++|+|||+| ||+|    +|+|+|+    |+|||++++.||++.++||        |||+|.++|++...+++
T Consensus       458 ~g~~v~v~l~vD~~lN-~llNvyD~~R~g~ir----vls~ki~~i~lck~~leek--------~~ylF~~vA~~~sq~~q  524 (966)
T KOG4286|consen  458 HGNLVNVPLCVDMCLN-WLLNVYDTGRTGRIR----VLSFKIGIISLCKAHLEDK--------YRYLFKQVASSTSQCDQ  524 (966)
T ss_pred             cccccccchHHHHHHH-HHHHhcccCCCcceE----EeeehhhHHHHhcchhHHH--------HHHHHHHHcCchhhHHH
Confidence            5788999999999999 9999    9999999    9999999999999999999        99999999999999999


Q ss_pred             HHHhHHHhhhhccccccccccccCCCcCCCc---------------cchhhhhcccCCCcccchhhhhccccccCCcccc
Q psy3216         263 RKLGLLLHDCIQLPRQLGEVASFGGSNIEPS---------------AVHFLSWLQQEPQSIVWLPVLHRLSAAESAKHQA  327 (547)
Q Consensus       263 ~~l~~lL~~~i~lP~~vge~~sfggs~~~ps---------------~~~Fl~w~~~ePq~l~WLpll~rl~a~e~v~H~v  327 (547)
                      ++|+.||+++|+||+++||+++|||+|++|+               ...|++|+..+||.+||||++||+.++|.++|..
T Consensus       525 ~~l~lLL~dliqipr~lGE~aAfGgsNvepsvrsCF~~v~~~pei~~~~f~dw~~~epqsmVwL~vlhRv~~aE~~kH~~  604 (966)
T KOG4286|consen  525 RRLGLLLHDLIQIPRQLGEVAAFGGSNIEPSVRSCFQFVNNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQA  604 (966)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHhhcCCCCChHHHHHHHhcCCCCcchHHHHHHHhccCcchhhHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999876               5779999999999999999999999999999999


Q ss_pred             cCCCCCCCCcccccccccccCCCccchhhhhcCccCCCCCCCCCceEeecCCCCchhHHHHHHHHHhhccccccccCCCC
Q psy3216         328 KCNICKECPIIGFRYRCLKCFNFDMCQTCFFQGKKAKNHKLTHPMQEYCTTTTSGEDVRDFTRALRNKFKSKRYFKKHPR  407 (547)
Q Consensus       328 ~Cd~C~~~pI~G~RykC~~C~nfDLC~~Cf~~g~~~~~H~~~H~~~e~~~~~s~~~~~kd~~~~lr~~~~~~~~~~k~p~  407 (547)
                      +|++|+++||+|+||||++|||||+|+.||++|+++++|++.|||.|||+|++++++++||++.|+|+|++++||.|||+
T Consensus       605 kCniCk~~pIvG~RyR~l~~fn~dlCq~CF~sgraak~hk~~~pM~Ey~~~tts~~d~rdfak~L~nkfr~~~~~a~~~r  684 (966)
T KOG4286|consen  605 KCNICKECPIIGFRYRSLKHFNYDICQSCFFSGRAAKGHKMHYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPR  684 (966)
T ss_pred             hcchhhhCccceeeeeehhhcChhHHhhHhhhcccccCCCCCCCceeeeCCCCChhhHHHHHHHHHhhhccchhhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccccCCCCCC-CCCCCCCCCCCCCCCcchhhHHHHHHHHHhhhccC------CCCCCCCchHHHHHHHHHHhh
Q psy3216         408 VGYLPVQTVLEGDALES-PAPSPQHSHTIGPHDMHSRLEMYASRLAEVELRTR------SNSTPDSEDEHQLIAQYCHSL  480 (547)
Q Consensus       408 ~~~~P~~~~~~~~~~~~-p~~~p~~~~~~~~~d~h~~i~~ya~rLa~~~~~~~------~~~~~~~ddEh~lIa~y~~~L  480 (547)
                      +||+|++++++||++++ |+.+|.    ..+.|.|++|+.|++|||.|+....      .+++.+.||+|.+|.+|+..|
T Consensus       685 rGylpvq~~~e~~~~et~pa~sP~----~~~t~t~s~~~~~asRla~me~qn~S~~~dsgs~~~s~~~~q~lI~~~~~qL  760 (966)
T KOG4286|consen  685 RGYLPVQTVLEGDNMETQPASSPQ----LSHTDTHSRIEHYASRLAEMENQNGSYLNDSGSPNESIDDEQLLIQHYCQQL  760 (966)
T ss_pred             cCCccchhcccccccccCccCCCC----CcccchHHHHHHHHHHHHHHHHccccccCCCCCccccchhHHHHHHHHHHHh
Confidence            99999999999999887 333444    3678999999999999999996433      234456899999999999999


Q ss_pred             cCCCCCCCCCChhHhhhhcchhhHHHHHHHHHHH
Q psy3216         481 NGGDIVPVPRSPVQVMHAIDADQREELEVMISVL  514 (547)
Q Consensus       481 ~~~~~~~~~~~p~~l~~~~~~~~r~~Le~~i~~L  514 (547)
                      .++++.+++.+|+||+..+++++|+|||.|++.+
T Consensus       761 ~rd~~~~q~~s~~~ilQf~~~e~r~ELe~I~a~l  794 (966)
T KOG4286|consen  761 NQDSPLSQPRSPAQILQSLESEERGELERILADL  794 (966)
T ss_pred             ccccccccccChHHHHHHHHHHHhhHHHHHHHHH
Confidence            9999999999999999999999999999999999

>KOG4301|consensus Back     alignment and domain information
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions Back     alignment and domain information
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions Back     alignment and domain information
>cd02334 ZZ_dystrophin Zinc finger, ZZ type Back     alignment and domain information
>cd02345 ZZ_dah Zinc finger, ZZ type Back     alignment and domain information
>cd02343 ZZ_EF Zinc finger, ZZ type Back     alignment and domain information
>cd02344 ZZ_HERC2 Zinc finger, ZZ type Back     alignment and domain information
>cd02339 ZZ_Mind_bomb Zinc finger, ZZ type Back     alignment and domain information
>cd02338 ZZ_PCMF_like Zinc finger, ZZ type Back     alignment and domain information
>cd02341 ZZ_ZZZ3 Zinc finger, ZZ type Back     alignment and domain information
>cd02340 ZZ_NBR1_like Zinc finger, ZZ type Back     alignment and domain information
>cd02335 ZZ_ADA2 Zinc finger, ZZ type Back     alignment and domain information
>PF00569 ZZ: Zinc finger, ZZ type; InterPro: IPR000433 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>cd02249 ZZ Zinc finger, ZZ type Back     alignment and domain information
>cd02342 ZZ_UBA_plant Zinc finger, ZZ type Back     alignment and domain information
>smart00291 ZnF_ZZ Zinc-binding domain, present in Dystrophin, CREB-binding protein Back     alignment and domain information
>KOG1280|consensus Back     alignment and domain information
>KOG4582|consensus Back     alignment and domain information
>cd02337 ZZ_CBP Zinc finger, ZZ type Back     alignment and domain information
>KOG0457|consensus Back     alignment and domain information
>cd02336 ZZ_RSC8 Zinc finger, ZZ type Back     alignment and domain information
>COG5114 Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] Back     alignment and domain information
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure Back     alignment and domain information
>smart00150 SPEC Spectrin repeats Back     alignment and domain information
>KOG4301|consensus Back     alignment and domain information
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here Back     alignment and domain information
>KOG4286|consensus Back     alignment and domain information
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines Back     alignment and domain information
>KOG0044|consensus Back     alignment and domain information
>PF03107 C1_2: C1 domain; InterPro: IPR004146 This short domain is rich in cysteines and histidines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
1eg3_A261 Structure Of A Dystrophin Ww Domain Fragment In Com 1e-46
2e5r_A63 Solution Structure Of The Zz Domain Of Dystrobrevin 4e-09
>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex With A Beta-Dystroglycan Peptide Length = 261 Back     alignment and structure 
Iteration: 1

 Score =  184 bits (467), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/252 (43%), Positives = 146/252 (57%), Gaps = 35/252 (13%)
Query: 86  SHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFD 145
           +H T+TT WDHPKM +L  SL++LN VRFSAYRTA+KLR +QK LCLDLL+L  A +A D
Sbjct: 30  NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD 89
Query: 146 THGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGXXXXXXXXXXXXXXXLEMAAEAKL 205
            H L+ QND+ +D+  ++      + L   Y+RL                 ++M     L
Sbjct: 90  QHNLK-QNDQPMDILQII------NCLTTIYDRLE----QEHNNLVNVPLCVDMCLNWLL 138
Query: 206 LRQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKL 265
                GR   R+++L      +    + LE K        ++ LF+ +A      DQR+L
Sbjct: 139 NVYDTGR-TGRIRVLSFKTGIISLCKAHLEDK--------YRYLFKQVASSTGFCDQRRL 189
Query: 266 GLLLHDCIQLPRQLGEVASFGGSNIEPS---------------AVHFLSWLQQEPQSIVW 310
           GLLLHD IQ+PRQLGEVASFGGSNIEPS               A  FL W++ EPQS+VW
Sbjct: 190 GLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVW 249
Query: 311 LPVLHRLSAAES 322
           LPVLHR++AAE+
Sbjct: 250 LPVLHRVAAAET 261
>pdb|2E5R|A Chain A, Solution Structure Of The Zz Domain Of Dystrobrevin Alpha (Dystrobrevin-Alpha) Length = 63 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query547
1eg3_A261 Dystrophin; EF-hand like domain, WW domain, struct 3e-47
2e5r_A63 Dystrobrevin alpha; ZZ domain, structural genomics 2e-28
2fc7_A82 ZZZ3 protein; structure genomics, ZZ domain, struc 3e-17
2dip_A98 Zinc finger SWIM domain-containing protein 2; ZZ d 5e-14
1tot_A52 CREB-binding protein; zinc binding, CBP, TAZ2, tra 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
1v5n_A89 PDI-like hypothetical protein AT1G60420; DC1 domai 2e-04
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Length = 261 Back     alignment and structure
 Score =  164 bits (417), Expect = 3e-47
 Identities = 107/255 (41%), Positives = 143/255 (56%), Gaps = 41/255 (16%)

Query: 86  SHHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFD 145
           +H T+TT WDHPKM +L  SL++LN VRFSAYRTA+KLR +QK LCLDLL+L  A +A D
Sbjct: 30  NHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALD 89

Query: 146 THGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTPDPSSTTTPDDLEMAAEAKL 205
            H L+ QND+ +D+  ++      + L   Y+RL         +    P  ++M     L
Sbjct: 90  QHNLK-QNDQPMDILQII------NCLTTIYDRLEQEH----NNLVNVPLCVDMCLNWLL 138

Query: 206 L---RQHKGRLEARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQ 262
                   GR+              +  +  L  K     ++ +  LF+ +A      DQ
Sbjct: 139 NVYDTGRTGRIRV---------LSFKTGIISL-CKAHLEDKYRY--LFKQVASSTGFCDQ 186

Query: 263 RKLGLLLHDCIQLPRQLGEVASFGGSNIEPSA---------------VHFLSWLQQEPQS 307
           R+LGLLLHD IQ+PRQLGEVASFGGSNIEPS                  FL W++ EPQS
Sbjct: 187 RRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWMRLEPQS 246

Query: 308 IVWLPVLHRLSAAES 322
           +VWLPVLHR++AAE+
Sbjct: 247 MVWLPVLHRVAAAET 261
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 63 Back     alignment and structure
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6 Length = 82 Back     alignment and structure
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6 Length = 98 Back     alignment and structure
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6 Length = 52 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3 Length = 89 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
1eg3_A261 Dystrophin; EF-hand like domain, WW domain, struct 100.0
2e5r_A63 Dystrobrevin alpha; ZZ domain, structural genomics 99.76
2fc7_A82 ZZZ3 protein; structure genomics, ZZ domain, struc 99.64
2dip_A98 Zinc finger SWIM domain-containing protein 2; ZZ d 99.52
1tot_A52 CREB-binding protein; zinc binding, CBP, TAZ2, tra 99.15
3uul_A118 Utrophin; spectrin repeat, structural protein, cyt 97.52
3uun_A119 Dystrophin; triple helical, cell structure and sta 97.18
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 95.42
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 95.33
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 94.59
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 93.99
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 93.98
1u5p_A216 Spectrin alpha chain, brain; alpha spectrin, two r 93.72
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 93.48
3f31_A149 Spectrin alpha chain, brain; LONE helix followed b 93.39
1s6c_A183 KV4 potassium channel-interacting protein kchip1B; 92.21
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 92.2
1hci_A476 Alpha-actinin 2; triple-helix coiled coil, contrac 92.07
3lbx_A161 Spectrin alpha chain, erythrocyte; tetramer, compl 92.07
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 91.79
1cun_A213 Protein (alpha spectrin); two repeats of spectrin, 91.6
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 91.41
3dd4_A229 KV channel-interacting protein 4; EF-hands protein 91.24
1u4q_A322 Spectrin alpha chain, brain; alpha spectrin, three 90.83
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 90.82
3edv_A323 Spectrin beta chain, brain 1; spectrin repeat, coi 89.58
2l2e_A190 Calcium-binding protein NCS-1; NCS1P, myristoylate 89.44
3edu_A218 Beta-I spectrin, spectrin beta chain, erythrocyte; 89.35
2jul_A256 Calsenilin; EF-hand, calcium, LXXLL, DNA binding p 89.08
1g8i_A190 Frequenin, neuronal calcium sensor 1; calcium bind 88.67
2ysb_A49 Salvador homolog 1 protein; WW domain, structural 88.59
1s1e_A224 KV channel interacting protein 1; kchip, calcium-b 88.57
1s35_A214 Beta-I spectrin, spectrin beta chain, erythrocyte; 88.5
3kbt_A326 Beta-I spectrin, spectrin beta chain, erythrocyte; 88.06
1v5n_A89 PDI-like hypothetical protein AT1G60420; DC1 domai 87.7
1quu_A250 Human skeletal muscle alpha-actinin 2; triple-heli 87.4
1wr7_A41 NEDD4-2; all-beta, ligase; NMR {Mus musculus} 87.15
2ysf_A40 E3 ubiquitin-protein ligase itchy homolog; AIP4, N 86.95
3lbx_B185 Beta-I spectrin, spectrin beta chain, erythrocyte; 86.7
2ez5_W46 Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW doma 86.5
2ysg_A40 Syntaxin-binding protein 4; synip, STXBP4, WW doma 86.48
1bjf_A193 Neurocalcin delta; calcium-binding, myristoylation 86.34
2law_A38 Yorkie homolog; YAP, SMAD1, CDK, signal transducti 85.93
1fpw_A190 Yeast frequenin, calcium-binding protein NCS-1; EF 85.41
3fb2_A218 Spectrin alpha chain, brain spectrin; non-erythroi 85.11
2spc_A107 Spectrin; cytoskeleton; 1.80A {Drosophila melanoga 85.0
1wr4_A36 Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {M 84.79
2dmv_A43 Itchy homolog E3 ubiquitin protein ligase; WW doma 83.91
2d8n_A207 Recoverin; structural genomics, NPPSFA, national p 83.26
1wr3_A36 Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {M 83.24
1sjj_A863 Actinin; 3-helix bundle, calponin homology domain, 82.43
3khe_A191 Calmodulin-like domain protein kinase isoform 3; c 82.21
3pm8_A197 PFCDPK2, calcium-dependent protein kinase 2; malar 81.93
2kyk_A39 E3 ubiquitin-protein ligase itchy homolog; LMP2A, 81.75
2ehb_A207 Calcineurin B-like protein 4; protein complex, Ca( 81.51
2l4j_A46 YES-associated protein 2 (YAP2); WW domain, medaka 81.24
3pdy_A210 Plectin; cytoskeleton, plakin, intermediate filame 81.15
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A Back     alignment and structure
Probab=100.00  E-value=1.6e-51  Score=413.85  Aligned_cols=233  Identities=48%  Similarity=0.786  Sum_probs=212.7

Q ss_pred             cccccCCcccCcchhhhhhhccCC-----CCCcccccCchhHHHHHHHHhhhccchhhHHHHHHHHHhHhHhhccccccH
Q psy3216          63 SFFSSNNILITSNSLHKLDDLNTS-----HHTETTSWDHPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNL  137 (547)
Q Consensus        63 ~~l~~~~v~Ls~~~~~~LedlN~R-----h~~~~t~wdhp~~~~l~~~l~~~n~Irfs~YRtA~KLR~lQk~~~l~lv~l  137 (547)
                      ++|....++..|+.  +... |-|     |+|+|||||||+|+++++++++||+|||++||||||||+|||+|+||+|++
T Consensus         5 q~~~~~~l~~~we~--~~~~-~~~~y~~~h~~~tt~w~~p~~~~~~~~l~~~~~~r~~~yRta~klr~lq~~~~l~lv~l   81 (261)
T 1eg3_A            5 QHFLSTSVQGPWER--AISP-NKVPYYINHETQTTCWDHPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSL   81 (261)
T ss_dssp             HHHHHTTCCTTEEE--EECT-TSCEEEEETTTTEEESSCHHHHHHHHHGGGGTTCSSHHHHHHHHHHHHHHHTTGGGCCH
T ss_pred             ccccCCCCCCCcce--eECC-CCCeEeecCCcccccCCCCchhhhhcccccccceehhhHHHHHhhHhhhhhheeceeeH
Confidence            44555555556665  4443 444     999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhCCCcccCCcccChhhhhhhHHhhHHHHHHHHHHhCCCCCCCCCCCCchhHHHHHHHHHHhh----cccCcc
Q psy3216         138 VRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAEYERLRGSRTTPDPSSTTTPDDLEMAAEAKLLR----QHKGRL  213 (547)
Q Consensus       138 ~~~~~~f~~~~l~~~~~~~l~v~~~~~l~~~~~~L~~iY~~L~~~~~~p~~~~~~v~~~~dLllnawLL~----~r~Grl  213 (547)
                      ++|+++|++|||+ ++++.++|.+++++      |++||++++++    .|.+++++.|++++++ |+.+    .++|+|
T Consensus        82 ~~~~~~f~~~~l~-~~~~~l~~~~l~~~------L~~lY~~l~~~----~p~~v~~~~~~~~~a~-~lf~~FD~~~~G~I  149 (261)
T 1eg3_A           82 SAACDALDQHNLK-QNDQPMDILQIINC------LTTIYDRLEQE----HNNLVNVPLCVDMCLN-WLLNVYDTGRTGRI  149 (261)
T ss_dssp             HHHHHHHHHTTCC-CTTSEEEHHHHHHH------HHHHHHHHHHH----STTTCCHHHHHHHHHH-HHHHHHCTTCCSEE
T ss_pred             HHHHHHHHHcCCC-CCCCCCCHHHHHHH------HHHHHHHHHhh----CcCcCCchhhHHHHHH-HHHHHccCCCCceE
Confidence            9999999999998 79999999999999      99999999998    4558999999999999 9987    899999


Q ss_pred             ccchhHHHHHHHHHHHhcccchhccccchhhhhhhhcccccCCCCcccHHHHhHHHhhhhccccccccccccCCCcC---
Q psy3216         214 EARMQILEDHNRQLEAQLSQLESKDRSSSRFIFQNLFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNI---  290 (547)
Q Consensus       214 ~~rm~Vls~k~~l~~Lc~~~L~dK~~~~~~~~~rylF~liad~~g~~~~~~l~~lL~~~i~lP~~vge~~sfggs~~---  290 (547)
                      +    ++||+++|.++|.|+++||        |+++|++++|++|+|+++.|..+|+++.+||+.|||+++||++++   
T Consensus       150 ~----f~ef~~aLs~l~rG~leeK--------L~w~F~lyDD~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~  217 (261)
T 1eg3_A          150 R----VLSFKTGIISLCKAHLEDK--------YRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPS  217 (261)
T ss_dssp             E----HHHHHHHHHHTSSSCHHHH--------HHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHH
T ss_pred             e----HHHHHHHHHHHcCCCHHHH--------HHHHHheeeCCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHH
Confidence            9    9999999999999999999        999999999999999999999999999999999999999988643   


Q ss_pred             ------------CCccchhhhhcccCCCcccchhhhhccccccC
Q psy3216         291 ------------EPSAVHFLSWLQQEPQSIVWLPVLHRLSAAES  322 (547)
Q Consensus       291 ------------~ps~~~Fl~w~~~ePq~l~WLpll~rl~a~e~  322 (547)
                                  ..++++|++|+..+|+.++|||++|||+++|+
T Consensus       218 v~~~F~~~d~dg~It~~EFl~~~~~dp~il~wL~~lhR~~~~E~  261 (261)
T 1eg3_A          218 VRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAET  261 (261)
T ss_dssp             HHHHHHHTTTCSCBCHHHHHHHHHTCCTTTTHHHHHHHHHHHCC
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence                        23479999999999999999999999998874
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6 Back     alignment and structure
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6 Back     alignment and structure
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A Back     alignment and structure
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens} Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Back     alignment and structure
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Back     alignment and structure
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0 Back     alignment and structure
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Back     alignment and structure
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Back     alignment and structure
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Back     alignment and structure
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} Back     alignment and structure
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Back     alignment and structure
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A Back     alignment and structure
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Back     alignment and structure
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Back     alignment and structure
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1 Back     alignment and structure
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Back     alignment and structure
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A Back     alignment and structure
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3 Back     alignment and structure
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 Back     alignment and structure
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus} Back     alignment and structure
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1 Back     alignment and structure
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} Back     alignment and structure
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster} Back     alignment and structure
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1 Back     alignment and structure
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Back     alignment and structure
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens} Back     alignment and structure
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Back     alignment and structure
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} Back     alignment and structure
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1 Back     alignment and structure
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A* Back     alignment and structure
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Back     alignment and structure
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} Back     alignment and structure
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Back     alignment and structure
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Back     alignment and structure
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Back     alignment and structure
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens} Back     alignment and structure
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Back     alignment and structure
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes} Back     alignment and structure
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 547
d1eg3a297 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapie 5e-34
d1eg3a1125 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapien 9e-25
d2fc7a169 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing p 5e-15
d2dipa185 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing p 5e-14
d1tota152 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse 1e-11
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Length = 97 Back     information, alignment and structure

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 5e-34
 Identities = 51/89 (57%), Positives = 61/89 (68%), Gaps = 15/89 (16%)

Query: 249 LFRLIADPNRLVDQRKLGLLLHDCIQLPRQLGEVASFGGSNIEPSA-------------- 294
           LF+ +A      DQR+LGLLLHD IQ+PRQLGEVASFGGSNIEPS               
Sbjct: 9   LFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE 68

Query: 295 -VHFLSWLQQEPQSIVWLPVLHRLSAAES 322
              FL W++ EPQS+VWLPVLHR++AAE+
Sbjct: 69  AALFLDWMRLEPQSMVWLPVLHRVAAAET 97
>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Length = 69 Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 85 Back     information, alignment and structure
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]} Length = 52 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query547
d1eg3a1125 Dystrophin {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1eg3a297 Dystrophin {Human (Homo sapiens) [TaxId: 9606]} 99.91
d2fc7a169 Zinc finger ZZ-type-containing protein 3, ZZZ3 {Hu 99.52
d2dipa185 Zinc finger ZZ-type-containing protein 2 {Human (H 99.27
d1tota152 CREB-binding protein, CBP {Mouse (Mus musculus) [T 98.99
d1u5pa1110 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 97.03
d1hcia4114 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 95.62
d1u5pa2101 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 95.57
d1v5na_89 Pdi-like hypothetical protein At1g60420 {Thale cre 95.05
d1eg3a338 Dystrophin {Human (Homo sapiens) [TaxId: 9606]} 94.99
d1owaa_156 Spectrin alpha chain {Human (Homo sapiens) [TaxId: 94.51
d1quua1124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 94.47
d1s35a2105 Spectrin beta chain {Human (Homo sapiens) [TaxId: 94.21
d1fpwa_190 Frequenin (neuronal calcium sensor 1) {Baker's yea 93.75
d1s6ca_178 Kchip1, Kv4 potassium channel-interacting protein 93.67
d2spca_107 Spectrin alpha chain {Drosophila sp. [TaxId: 7242] 93.47
d1s35a1106 Spectrin beta chain {Human (Homo sapiens) [TaxId: 93.31
d1cuna2104 Spectrin alpha chain {Chicken (Gallus gallus) [Tax 93.26
d1omra_201 Recoverin {Cow (Bos taurus) [TaxId: 9913]} 92.74
d1g8ia_187 Frequenin (neuronal calcium sensor 1) {Human (Homo 92.18
d2jmfa133 Ubiquitin ligase NEDD4 WWIII domain {fruit fly (Dr 89.46
d1quua2124 alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} 88.97
d1tk7a145 Suppressor of deltex (Cg4244-pb) {Fruit fly (Droso 87.96
d1bjfa_181 Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} 87.85
d2zfda1183 Calcineurin B-like protein 2 {Thale cress (Arabido 86.71
d1jmqa_46 Yap65 ww domain {Human (Homo sapiens) [TaxId: 9606 86.27
d2fi0a179 Hypothetical protein SPr0485/SP0561 {Streptococcus 82.67
d1i5hw_50 Ubiquitin ligase NEDD4 WWIII domain {Rat (Rattus n 81.56
d1jbaa_189 Guanylate cyclase activating protein 2, GCAP-2 {Co 81.25
>d1eg3a1 a.39.1.7 (A:85-209) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Dystrophin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-41  Score=303.63  Aligned_cols=121  Identities=41%  Similarity=0.647  Sum_probs=117.1

Q ss_pred             chhHHHHHHHHhhhccchhhHHHHHHHHHhHhHhhccccccHHHHHHHHhhCCCcccCCcccChhhhhhhHHhhHHHHHH
Q psy3216          96 HPKMIQLMNSLSELNEVRFSAYRTALKLRTVQKRLCLDLLNLVRAIEAFDTHGLRAQNDKLLDVSDMVVLEEENHMLQAE  175 (547)
Q Consensus        96 hp~~~~l~~~l~~~n~Irfs~YRtA~KLR~lQk~~~l~lv~l~~~~~~f~~~~l~~~~~~~l~v~~~~~l~~~~~~L~~i  175 (547)
                      ||+|+|||++|++||+|||||||||||||+|||+|+||+||+|+++++|++|||+ ++|..++|.+++++      |+++
T Consensus         1 HP~m~el~~~l~dln~IrfsaYRTA~KLR~vQK~~~l~lv~l~~~~e~f~~~~l~-~~d~~l~v~~l~~~------L~~i   73 (125)
T d1eg3a1           1 HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLK-QNDQPMDILQIINC------LTTI   73 (125)
T ss_dssp             CHHHHHHHHHGGGGTTCSSHHHHHHHHHHHHHHHTTGGGCCHHHHHHHHHHTTCC-CTTSEEEHHHHHHH------HHHH
T ss_pred             CchHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHcCCC-CCccCCCHHHHHHH------HHHH
Confidence            9999999999999999999999999999999999999999999999999999998 78999999999999      9999


Q ss_pred             HHHHhCCCCCCCCCCCCchhHHHHHHHHHHhh----cccCccccchhHHHHHHHHHHHhcc
Q psy3216         176 YERLRGSRTTPDPSSTTTPDDLEMAAEAKLLR----QHKGRLEARMQILEDHNRQLEAQLS  232 (547)
Q Consensus       176 Y~~L~~~~~~p~~~~~~v~~~~dLllnawLL~----~r~Grl~~rm~Vls~k~~l~~Lc~~  232 (547)
                      |++++++    .|.+++||+|+||++| ||++    +|+|+|+    |+|+|++|++||.+
T Consensus        74 y~~l~~~----~~~~v~vp~~~dl~LN-~LlnvYD~~rtG~i~----vls~KvaL~~LC~a  125 (125)
T d1eg3a1          74 YDRLEQE----HNNLVNVPLCVDMCLN-WLLNVYDTGRTGRIR----VLSFKTGIISLCKA  125 (125)
T ss_dssp             HHHHHHH----STTTCCHHHHHHHHHH-HHHHHHCTTCCSEEE----HHHHHHHHHHTSSS
T ss_pred             HHHhhhh----CcccCChHHHHHHHHH-HHHHHhCCCCCCeee----ehHHHHHHHHHhCC
Confidence            9999998    5688999999999999 9999    9999999    99999999999974
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tota1 g.44.1.6 (A:1-52) CREB-binding protein, CBP {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u5pa1 a.7.1.1 (A:1662-1771) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1v5na_ g.49.1.3 (A:) Pdi-like hypothetical protein At1g60420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1eg3a3 b.72.1.1 (A:47-84) Dystrophin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1owaa_ a.7.1.1 (A:) Spectrin alpha chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2spca_ a.7.1.1 (A:) Spectrin alpha chain {Drosophila sp. [TaxId: 7242]} Back     information, alignment and structure
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2jmfa1 b.72.1.1 (A:521-553) Ubiquitin ligase NEDD4 WWIII domain {fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tk7a1 b.72.1.1 (A:1-45) Suppressor of deltex (Cg4244-pb) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1jmqa_ b.72.1.1 (A:) Yap65 ww domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1i5hw_ b.72.1.1 (W:) Ubiquitin ligase NEDD4 WWIII domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure